BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003278
(834 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 119/311 (38%), Positives = 179/311 (57%), Gaps = 24/311 (7%)
Query: 101 FSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE-KGERFEKTFAAEL 159
FS EL + S+ F +LG GGFGKVY+ L +DGT+VAVK L E + + E F E+
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERXQGGELQFQTEV 86
Query: 160 VAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKK 219
++ HRNL+RLRG+C+ + LLVY YM N S+ L RP E+ PL+W +R++
Sbjct: 87 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP---ESQPPLDWPKRQR 143
Query: 220 IIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTS 279
I G A L YLH+ + +IIHRDVK +N++LD ++ A +GDFGLA+ ++++
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-------- 195
Query: 280 SARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLT- 338
H+ R GTIG++ PE G ++ K+DVF +G+++LE+++G+RA DL
Sbjct: 196 -----DXHVXXAVR--GTIGHIAPEYLSTGK-SSEKTDVFGYGVMLLELITGQRAFDLAR 247
Query: 339 -YPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEXXXXXXXXXXXXNPHLRPS 397
DD ++LLDW++ L E K+ D L G+YK ++E +P RP
Sbjct: 248 LANDDDVMLLDWVKGLLKEKKLEALVDVDLQ-GNYKDEEVEQLIQVALLCTQSSPMERPK 306
Query: 398 MKWVIEAVSGS 408
M V+ + G
Sbjct: 307 MSEVVRMLEGD 317
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 100/320 (31%), Positives = 168/320 (52%), Gaps = 21/320 (6%)
Query: 501 REISFKEIISATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNE 560
+ S +E+ A++NFS + FG Y+G L + V VKRL + +F E
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 561 LQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYN 620
++ ++ HRNL++L G+C E L++Y Y A ++ L L W R
Sbjct: 86 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPE--SQPPLDWPKRQR 143
Query: 621 IIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKAT 680
I A + YLH+ + ++IHR++ ++ I LD + +G F LA+ + D A
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA- 202
Query: 681 SGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDF-RLP---EGLLV 736
VRG G+++PEY+ +G+++ DV+ +GV++LE++TGQ A D RL + +L+
Sbjct: 203 -----VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 257
Query: 737 KRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDG 796
V K+ L LVD+ L G Y +E+ +LI++ + CT S+P RP M +++ +L+G
Sbjct: 258 DWVKGLLKEKK-LEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 316
Query: 797 NDKRFMEDGQMTENLEEWKQ 816
DG + E EEW++
Sbjct: 317 -------DG-LAERWEEWQK 328
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 117/311 (37%), Positives = 177/311 (56%), Gaps = 24/311 (7%)
Query: 101 FSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE-KGERFEKTFAAEL 159
FS EL + S+ F +LG GGFGKVY+ L +DG +VAVK L E + + E F E+
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRL-ADGXLVAVKRLKEERTQGGELQFQTEV 78
Query: 160 VAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKK 219
++ HRNL+RLRG+C+ + LLVY YM N S+ L RP E+ PL+W +R++
Sbjct: 79 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP---ESQPPLDWPKRQR 135
Query: 220 IIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTS 279
I G A L YLH+ + +IIHRDVK +N++LD ++ A +GDFGLA+ ++++
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-------- 187
Query: 280 SARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLT- 338
H+ R G IG++ PE G ++ K+DVF +G+++LE+++G+RA DL
Sbjct: 188 -----DXHVXXAVR--GXIGHIAPEYLSTGK-SSEKTDVFGYGVMLLELITGQRAFDLAR 239
Query: 339 -YPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEXXXXXXXXXXXXNPHLRPS 397
DD ++LLDW++ L E K+ D L G+YK ++E +P RP
Sbjct: 240 LANDDDVMLLDWVKGLLKEKKLEALVDVDLQ-GNYKDEEVEQLIQVALLCTQSSPMERPK 298
Query: 398 MKWVIEAVSGS 408
M V+ + G
Sbjct: 299 MSEVVRMLEGD 309
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 168/320 (52%), Gaps = 21/320 (6%)
Query: 501 REISFKEIISATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNE 560
+ S +E+ A++NF + FG Y+G L + V VKRL + +F E
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTE 77
Query: 561 LQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYN 620
++ ++ HRNL++L G+C E L++Y Y A ++ L L W R
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPE--SQPPLDWPKRQR 135
Query: 621 IIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKAT 680
I A + YLH+ + ++IHR++ ++ I LD + +G F LA+ + D A
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA- 194
Query: 681 SGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDF-RLP---EGLLV 736
VRG G+++PEY+ +G+++ DV+ +GV++LE++TGQ A D RL + +L+
Sbjct: 195 -----VRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 249
Query: 737 KRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDG 796
V +++ L LVD+ L G Y +E+ +LI++ + CT S+P RP M +++ +L+G
Sbjct: 250 DWVKGL-LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308
Query: 797 NDKRFMEDGQMTENLEEWKQ 816
DG + E EEW++
Sbjct: 309 -------DG-LAERWEEWQK 320
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 135/246 (54%), Gaps = 35/246 (14%)
Query: 101 FSYAELYIGSNGFDEDEV------LGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGER 150
FS+ EL +N FDE + +G GGFG VY+ + + T VAVK LA E
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEE 72
Query: 151 FEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAA 210
++ F E+ +A +H NLV L G+ D L LVY YMPN SL R L+
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL----LDRLSCLDGTP 128
Query: 211 PLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEH 270
PL+W R KI +G A +++LHE IHRD+K++N++LD + A++ DFGLAR E
Sbjct: 129 PLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEK 185
Query: 271 ELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
Q M +RI GT Y+ PE+ +G + T KSD++SFG+V+LE+++
Sbjct: 186 FAQTVM--------------XSRIVGTTAYMAPEAL-RGEI-TPKSDIYSFGVVLLEIIT 229
Query: 331 GRRAVD 336
G AVD
Sbjct: 230 GLPAVD 235
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 146/299 (48%), Gaps = 21/299 (7%)
Query: 504 SFKEIISATNNFSE------SQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPA--LRT 555
SF E+ + TNNF E ++ E FG Y+G+++N + K M L+
Sbjct: 16 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQ 75
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQW 615
+F E++ +A+ +H NLV+L G+ ++ ++ ++Y Y LL + G L W
Sbjct: 76 QFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPN---GSLLDRLSCLDGTPPLSW 132
Query: 616 HHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHG 675
H R I + A+ I +LHE + IHR+I S+ I LD ++ F LA R
Sbjct: 133 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA----RASEK 185
Query: 676 HRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLL 735
+ +R V G YM+PE + GE T +D+YSFGVV+LE++TG AVD LL
Sbjct: 186 FAQTVMXSRIV-GTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL 243
Query: 736 VKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSIL 794
+ E E ++ + + +D +N + + + + + C RP ++++ +L
Sbjct: 244 LDIKEEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 134/246 (54%), Gaps = 35/246 (14%)
Query: 101 FSYAELYIGSNGFDEDEV------LGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGER 150
FS+ EL +N FDE + +G GGFG VY+ + + T VAVK LA E
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEE 72
Query: 151 FEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAA 210
++ F E+ +A +H NLV L G+ D L LVY YMPN SL R L+
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL----LDRLSCLDGTP 128
Query: 211 PLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEH 270
PL+W R KI +G A +++LHE IHRD+K++N++LD + A++ DFGLAR E
Sbjct: 129 PLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEK 185
Query: 271 ELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
Q M RI GT Y+ PE+ +G + T KSD++SFG+V+LE+++
Sbjct: 186 FAQTVM--------------XXRIVGTTAYMAPEAL-RGEI-TPKSDIYSFGVVLLEIIT 229
Query: 331 GRRAVD 336
G AVD
Sbjct: 230 GLPAVD 235
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 145/299 (48%), Gaps = 21/299 (7%)
Query: 504 SFKEIISATNNFSE------SQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPA--LRT 555
SF E+ + TNNF E ++ E FG Y+G+++N + K M L+
Sbjct: 16 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQ 75
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQW 615
+F E++ +A+ +H NLV+L G+ ++ ++ ++Y Y LL + G L W
Sbjct: 76 QFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPN---GSLLDRLSCLDGTPPLSW 132
Query: 616 HHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHG 675
H R I + A+ I +LHE + IHR+I S+ I LD ++ F LA R
Sbjct: 133 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA----RASEK 185
Query: 676 HRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLL 735
+ R V G YM+PE + GE T +D+YSFGVV+LE++TG AVD LL
Sbjct: 186 FAQTVMXXRIV-GTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL 243
Query: 736 VKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSIL 794
+ E E ++ + + +D +N + + + + + C RP ++++ +L
Sbjct: 244 LDIKEEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 134/246 (54%), Gaps = 35/246 (14%)
Query: 101 FSYAELYIGSNGFDEDEV------LGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGER 150
FS+ EL +N FDE + +G GGFG VY+ + + T VAVK LA E
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEE 66
Query: 151 FEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAA 210
++ F E+ +A +H NLV L G+ D L LVY YMPN SL R L+
Sbjct: 67 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL----LDRLSCLDGTP 122
Query: 211 PLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEH 270
PL+W R KI +G A +++LHE IHRD+K++N++LD + A++ DFGLAR E
Sbjct: 123 PLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEK 179
Query: 271 ELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
Q M RI GT Y+ PE+ +G + T KSD++SFG+V+LE+++
Sbjct: 180 FAQXVM--------------XXRIVGTTAYMAPEAL-RGEI-TPKSDIYSFGVVLLEIIT 223
Query: 331 GRRAVD 336
G AVD
Sbjct: 224 GLPAVD 229
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 145/299 (48%), Gaps = 21/299 (7%)
Query: 504 SFKEIISATNNFSE------SQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPA--LRT 555
SF E+ + TNNF E ++ E FG Y+G+++N + K M L+
Sbjct: 10 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQ 69
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQW 615
+F E++ +A+ +H NLV+L G+ ++ ++ ++Y Y LL + G L W
Sbjct: 70 QFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPN---GSLLDRLSCLDGTPPLSW 126
Query: 616 HHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHG 675
H R I + A+ I +LHE + IHR+I S+ I LD ++ F LA R
Sbjct: 127 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA----RASEK 179
Query: 676 HRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLL 735
+ R V G YM+PE + GE T +D+YSFGVV+LE++TG AVD LL
Sbjct: 180 FAQXVMXXRIV-GTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL 237
Query: 736 VKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSIL 794
+ E E ++ + + +D +N + + + + + C RP ++++ +L
Sbjct: 238 LDIKEEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 295
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/261 (35%), Positives = 145/261 (55%), Gaps = 22/261 (8%)
Query: 109 GSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHR 168
+N FD ++G G FGKVY+ VL DG VA+K + + + F E+ ++ RH
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPESSQGIEEFETEIETLSFCRHP 95
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
+LV L G+C ++++L+Y YM N +L R L+ +L + ++WEQR +I G A L
Sbjct: 96 HLVSLIGFCDERNEMILIYKYMENGNLKRHLY--GSDLPTMS-MSWEQRLEICIGAARGL 152
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
HYLH + IIHRDVK+ N++LD + ++ DFG+++ Q HL
Sbjct: 153 HYLHTR---AIIHRDVKSINILLDENFVPKITDFGISK------------KGTELDQTHL 197
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLD 348
+ GT+GY+ PE F KG + T KSDV+SFG+V+ EV+ R A+ + P + + L +
Sbjct: 198 XXVVK--GTLGYIDPEYFIKGRL-TEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAE 254
Query: 349 WIRRLSDEGKVLQAGDNRLSD 369
W + G++ Q D L+D
Sbjct: 255 WAVESHNNGQLEQIVDPNLAD 275
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 131/282 (46%), Gaps = 12/282 (4%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHR 570
ATNNF + FG Y+G L + V +KR + E++ L+ RH
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEF-ETEIETLSFCRHP 95
Query: 571 NLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAIL 630
+LV L G+C E+ EM++IY Y L L+ ++ + + W R I A +
Sbjct: 96 HLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSD--LPTMSMSWEQRLEICIGAARGLH 153
Query: 631 YLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIF 690
YLH +IHR++ S I LD + P++ F +++ T D H V+G
Sbjct: 154 YLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXV-----VKGTL 205
Query: 691 GYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKR-PL 749
GY+ PEY G T +DVYSFGVV+ EV+ + A+ LP ++ E+ L
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265
Query: 750 AELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQIL 791
++VD +L + + L + + C + E RPSM +L
Sbjct: 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 93/261 (35%), Positives = 145/261 (55%), Gaps = 22/261 (8%)
Query: 109 GSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHR 168
+N FD ++G G FGKVY+ VL DG VA+K + + + F E+ ++ RH
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPESSQGIEEFETEIETLSFCRHP 95
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
+LV L G+C ++++L+Y YM N +L R L+ +L + ++WEQR +I G A L
Sbjct: 96 HLVSLIGFCDERNEMILIYKYMENGNLKRHLY--GSDLPTMS-MSWEQRLEICIGAARGL 152
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
HYLH + IIHRDVK+ N++LD + ++ DFG+++ Q HL
Sbjct: 153 HYLHTR---AIIHRDVKSINILLDENFVPKITDFGISK------------KGTELGQTHL 197
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLD 348
+ GT+GY+ PE F KG + T KSDV+SFG+V+ EV+ R A+ + P + + L +
Sbjct: 198 XXVVK--GTLGYIDPEYFIKGRL-TEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAE 254
Query: 349 WIRRLSDEGKVLQAGDNRLSD 369
W + G++ Q D L+D
Sbjct: 255 WAVESHNNGQLEQIVDPNLAD 275
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 130/282 (46%), Gaps = 12/282 (4%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHR 570
ATNNF + FG Y+G L + V +KR + E++ L+ RH
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEF-ETEIETLSFCRHP 95
Query: 571 NLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAIL 630
+LV L G+C E+ EM++IY Y L L+ ++ + + W R I A +
Sbjct: 96 HLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSD--LPTMSMSWEQRLEICIGAARGLH 153
Query: 631 YLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIF 690
YLH +IHR++ S I LD + P++ F +++ T H V+G
Sbjct: 154 YLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXV-----VKGTL 205
Query: 691 GYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKR-PL 749
GY+ PEY G T +DVYSFGVV+ EV+ + A+ LP ++ E+ L
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265
Query: 750 AELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQIL 791
++VD +L + + L + + C + E RPSM +L
Sbjct: 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 94/246 (38%), Positives = 130/246 (52%), Gaps = 35/246 (14%)
Query: 101 FSYAELYIGSNGFDEDEV------LGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGER 150
FS+ EL +N FDE + G GGFG VY+ + + T VAVK LA E
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEE 63
Query: 151 FEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAA 210
++ F E+ A +H NLV L G+ D L LVY Y PN SL R L+
Sbjct: 64 LKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSL----LDRLSCLDGTP 119
Query: 211 PLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEH 270
PL+W R KI +G A +++LHE IHRD+K++N++LD + A++ DFGLAR E
Sbjct: 120 PLSWHXRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEK 176
Query: 271 ELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
Q +RI GT Y PE+ +G + T KSD++SFG+V+LE+++
Sbjct: 177 FAQ--------------XVXXSRIVGTTAYXAPEAL-RGEI-TPKSDIYSFGVVLLEIIT 220
Query: 331 GRRAVD 336
G AVD
Sbjct: 221 GLPAVD 226
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 121/242 (50%), Gaps = 21/242 (8%)
Query: 503 ISFKEIISATNNFSE------SQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPA--LR 554
SF E+ + TNNF E + E FG Y+G+++N + K M L+
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 555 TRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQ 614
+F E++ A+ +H NLV+L G+ ++ ++ ++Y Y LL + G L
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPN---GSLLDRLSCLDGTPPLS 122
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
WH R I + A+ I +LHE + IHR+I S+ I LD ++ F LA R
Sbjct: 123 WHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA----RASE 175
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVD-FRLPEG 733
+ +R V G Y +PE + GE T +D+YSFGVV+LE++TG AVD R P+
Sbjct: 176 KFAQXVXXSRIV-GTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQL 233
Query: 734 LL 735
LL
Sbjct: 234 LL 235
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 116/238 (48%), Gaps = 48/238 (20%)
Query: 116 DEVLGSGGFGKVYRAVLPSDGTVVAVKCLA-EKGERFEKTFA---AELVAVAHLRHRNLV 171
+E++G GGFGKVYRA D VAVK + E +T E A L+H N++
Sbjct: 12 EEIIGIGGFGKVYRAFWIGDE--VAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNII 69
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLF--RRPENLEAAAPLNWEQRKKIIRGLAAALH 229
LRG C+ E L LV ++ L+RVL R P ++ +NW + +A ++
Sbjct: 70 ALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL----VNWAVQ------IARGMN 119
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYN--------ARLGDFGLARWLEHELQYQMRTSSA 281
YLH++ IIHRD+K+SN+++ + ++ DFGLAR
Sbjct: 120 YLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR--------------- 164
Query: 282 RNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR---RAVD 336
++H G ++ PE + S+ + SDV+S+G+++ E+++G R +D
Sbjct: 165 ---EWHRTTKMSAAGAYAWMAPEVI-RASMFSKGSDVWSYGVLLWELLTGEVPFRGID 218
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 96/183 (52%), Gaps = 22/183 (12%)
Query: 560 ELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRY 619
E + A L+H N++ L G C ++ + ++ +++ L+ +L + RI IL
Sbjct: 56 EAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL--SGKRIPPDIL-----V 108
Query: 620 NIIKSLASAILYLHEEWNEQVIHRNITSSAITL-----DPDMNPRLGSFALAEF-LTRND 673
N +A + YLH+E +IHR++ SS I + + D++ ++ + +F L R
Sbjct: 109 NWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKI--LKITDFGLAREW 166
Query: 674 HGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEG 733
H K ++ G + +M+PE I + + +DV+S+GV++ E++TG+ V FR +G
Sbjct: 167 HRTTKMSAA-----GAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE--VPFRGIDG 219
Query: 734 LLV 736
L V
Sbjct: 220 LAV 222
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 117/253 (46%), Gaps = 40/253 (15%)
Query: 96 DNPRIFSYAELY-IGSNGFDEDEVLGSGGFGKVYRA----VLP-SDGTVVAVKCLAEKGE 149
+NP+ FS A ++ I LG G FGKV+ A +LP D +VAVK L E E
Sbjct: 25 ENPQYFSDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE 84
Query: 150 RFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLE-- 207
+ F E + L+H+++VR G C LL+V++YM + L+R L + +
Sbjct: 85 SARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLL 144
Query: 208 ------AAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGD 261
A PL Q + +AA + YL +HRD+ T N ++ ++GD
Sbjct: 145 AGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGD 201
Query: 262 FGLARWLEHELQYQMRTSSARNHQFHLAETTRIGG----TIGYLPPESFQKGSVATAKSD 317
FG++R + + R+GG I ++PPES T +SD
Sbjct: 202 FGMSR------------------DIYSTDYYRVGGRTMLPIRWMPPESILYRKF-TTESD 242
Query: 318 VFSFGIVVLEVVS 330
V+SFG+V+ E+ +
Sbjct: 243 VWSFGVVLWEIFT 255
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 17/177 (9%)
Query: 554 RTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY----SATRIL-SH----LLFHN 604
R F E + L L+H+++V+ G CTE +L++++Y R L SH L
Sbjct: 87 RQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAG 146
Query: 605 NHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFA 664
+ L + +A+ ++YL +HR++ + + + ++G F
Sbjct: 147 GEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVVKIGDFG 203
Query: 665 LAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
++ + D+ G R++ I +M PE I + T+ +DV+SFGVV+ E+ T
Sbjct: 204 MSRDIYSTDY----YRVGGRTMLPIR-WMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 110/227 (48%), Gaps = 37/227 (16%)
Query: 119 LGSGGFGKVYRA----VLP-SDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRL 173
LG G FGKV+ A + P D +VAVK L + + K F E + +L+H ++V+
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 174 RGWCVHEDQLLLVYDYMPNRSLDRVL-FRRPENL---EAAAP--LNWEQRKKIIRGLAAA 227
G CV D L++V++YM + L++ L P+ + E P L Q I + +AA
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
+ YL Q +HRD+ T N ++ ++GDFG++R +
Sbjct: 141 MVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSR------------------DVY 179
Query: 288 LAETTRIGG----TIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ R+GG I ++PPES T +SDV+S G+V+ E+ +
Sbjct: 180 STDYYRVGGHTMLPIRWMPPESIMYRKF-TTESDVWSLGVVLWEIFT 225
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 108/237 (45%), Gaps = 19/237 (8%)
Query: 554 RTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLL-FHNNHRI---- 608
R F E + L L+H ++V+ G C E ++++++Y L+ L H +
Sbjct: 59 RKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAE 118
Query: 609 --GHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALA 666
+ L +I + +A+ ++YL ++ +HR++ + + ++ ++G F ++
Sbjct: 119 GNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKIGDFGMS 175
Query: 667 EFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAV 726
+ D+ +R +R +M PE I + T+ +DV+S GVV+ E+ T
Sbjct: 176 RDVYSTDY-YRVGGHTMLPIR----WMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
Query: 727 DFRLPEGLLVKRVHEFEARKRPLA---ELVDLSLNGEYNHKELMRLIKLGIACTLSN 780
++L +++ + + +RP E+ +L L G + + MR GI L N
Sbjct: 231 WYQLSNNEVIECITQGRVLQRPRTCPQEVYELML-GCWQREPHMRKNIKGIHTLLQN 286
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 107/229 (46%), Gaps = 39/229 (17%)
Query: 119 LGSGGFGKVYRA----VLP-SDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRL 173
LG G FGKV+ A +LP D +VAVK L E E + F E + L+H+++VR
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 174 RGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLE--------AAAPLNWEQRKKIIRGLA 225
G C LL+V++YM + L+R L + + A PL Q + +A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 226 AALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQ 285
A + YL +HRD+ T N ++ ++GDFG++R
Sbjct: 140 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR------------------D 178
Query: 286 FHLAETTRIGG----TIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ + R+GG I ++PPES T +SDV+SFG+V+ E+ +
Sbjct: 179 IYSTDYYRVGGRTMLPIRWMPPESILYRKF-TTESDVWSFGVVLWEIFT 226
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 17/177 (9%)
Query: 554 RTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY----SATRIL-SH----LLFHN 604
R F E + L L+H+++V+ G CTE +L++++Y R L SH L
Sbjct: 58 RQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAG 117
Query: 605 NHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFA 664
+ L + +A+ ++YL +HR++ + + + ++G F
Sbjct: 118 GEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVVKIGDFG 174
Query: 665 LAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
++ + D+ G R++ I +M PE I + T+ +DV+SFGVV+ E+ T
Sbjct: 175 MSRDIYSTDY----YRVGGRTMLPI-RWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 107/229 (46%), Gaps = 39/229 (17%)
Query: 119 LGSGGFGKVYRA----VLP-SDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRL 173
LG G FGKV+ A +LP D +VAVK L E E + F E + L+H+++VR
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 174 RGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLE--------AAAPLNWEQRKKIIRGLA 225
G C LL+V++YM + L+R L + + A PL Q + +A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 226 AALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQ 285
A + YL +HRD+ T N ++ ++GDFG++R
Sbjct: 146 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR------------------D 184
Query: 286 FHLAETTRIGG----TIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ + R+GG I ++PPES T +SDV+SFG+V+ E+ +
Sbjct: 185 IYSTDYYRVGGRTMLPIRWMPPESILYRKF-TTESDVWSFGVVLWEIFT 232
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 17/177 (9%)
Query: 554 RTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY----SATRIL-SH----LLFHN 604
R F E + L L+H+++V+ G CTE +L++++Y R L SH L
Sbjct: 64 RQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAG 123
Query: 605 NHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFA 664
+ L + +A+ ++YL +HR++ + + + ++G F
Sbjct: 124 GEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVVKIGDFG 180
Query: 665 LAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
++ + D+ G R++ I +M PE I + T+ +DV+SFGVV+ E+ T
Sbjct: 181 MSRDIYSTDY----YRVGGRTMLPI-RWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 114/225 (50%), Gaps = 37/225 (16%)
Query: 116 DEVLGSGGFGKVYRAVLPSDG---TVVAVKCLAEKG---ERFEKTFAAELVAVAHLRHRN 169
+EV+G+G FG+V R L + G + VA+K L KG ER + F +E + H N
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTL--KGGYTERQRREFLSEASIMGQFEHPN 78
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL G + ++++ ++M N +LD L Q ++RG+A+ +
Sbjct: 79 IIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI------QLVGMLRGIASGMR 132
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
YL E +HRD+ N++++S ++ DFGL+R+LE +
Sbjct: 133 YLAEM---SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEE-------------NSSDPT 176
Query: 290 ETTRIGGTIG--YLPPE--SFQKGSVATAKSDVFSFGIVVLEVVS 330
ET+ +GG I + PE +F+K T+ SD +S+GIV+ EV+S
Sbjct: 177 ETSSLGGKIPIRWTAPEAIAFRK---FTSASDAWSYGIVMWEVMS 218
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 94/203 (46%), Gaps = 18/203 (8%)
Query: 525 DFGTAYQGFLD----NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCT 580
+FG +G L V +K L R F +E + + H N+++L G T
Sbjct: 28 EFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVT 87
Query: 581 EQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQV 640
++++ ++ L L N+ + +++Q +++ +AS + YL E
Sbjct: 88 NSMPVMILTEFMENGALDSFLRLNDGQF--TVIQL---VGMLRGIASGMRYLAEM---SY 139
Query: 641 IHRNITSSAITLDPDMNPRLGSFALAEFLTRN--DHGHRKATSGNRSVRGIFGYMSPEYI 698
+HR++ + I ++ ++ ++ F L+ FL N D + G +R + +PE I
Sbjct: 140 VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIR----WTAPEAI 195
Query: 699 ESGEATSMADVYSFGVVVLEVVT 721
+ TS +D +S+G+V+ EV++
Sbjct: 196 AFRKFTSASDAWSYGIVMWEVMS 218
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 112/241 (46%), Gaps = 20/241 (8%)
Query: 99 RIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAE 158
RIF ++L G EVLG G FG+ + G V+ +K L E ++TF E
Sbjct: 5 RIFRPSDLIHG-------EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKE 57
Query: 159 LVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRK 218
+ + L H N+++ G + +L + +Y+ +L ++ +++++ P W QR
Sbjct: 58 VKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGII----KSMDSQYP--WSQRV 111
Query: 219 KIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRT 278
+ +A+ + YLH IIHRD+ + N ++ N + DFGLAR + E
Sbjct: 112 SFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGL 168
Query: 279 SSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLT 338
S + T + G ++ PE G K DVFSFGIV+ E++ GR D
Sbjct: 169 RSLKKPDRKKRYT--VVGNPYWMAPEMIN-GRSYDEKVDVFSFGIVLCEII-GRVNADPD 224
Query: 339 Y 339
Y
Sbjct: 225 Y 225
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 78/178 (43%), Gaps = 16/178 (8%)
Query: 557 FSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWH 616
F E++ + L H N+++ G + + I +Y L ++ + S W
Sbjct: 54 FLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGII-----KSMDSQYPWS 108
Query: 617 HRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLT---RND 673
R + K +AS + YLH + +IHR++ S + + N + F LA +
Sbjct: 109 QRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165
Query: 674 HGHRKATSGNR----SVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVD 727
G R +R +V G +M+PE I DV+SFG+V+ E++ G++ D
Sbjct: 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNAD 222
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 108/216 (50%), Gaps = 26/216 (12%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKT--FAAELVAVAHLRHRNLVRLR 174
E +G+G FG V+RA G+ VAVK L E+ E+ F E+ + LRH N+V
Sbjct: 43 EKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 175 GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQ 234
G L +V +Y+ SL R+L + A L+ +R + +A ++YLH +
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKS----GAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 235 LETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRI 294
I+HRD+K+ N+++D +Y ++ DFGL+R ++ S +
Sbjct: 157 -NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSR---------LKASX-------FLXSKXA 199
Query: 295 GGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
GT ++ PE + + KSDV+SFG+++ E+ +
Sbjct: 200 AGTPEWMAPEVL-RDEPSNEKSDVYSFGVILWELAT 234
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 15/169 (8%)
Query: 557 FSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWH 616
F E+ + RLRH N+V G T+ + ++ +Y + L LL + R L
Sbjct: 81 FLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAR---EQLDER 137
Query: 617 HRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGH 676
R ++ +A + YLH N ++HR++ S + +D ++ F L+
Sbjct: 138 RRLSMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL-------- 188
Query: 677 RKATS--GNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
KA+ ++ G +M+PE + + +DVYSFGV++ E+ T Q
Sbjct: 189 -KASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQ 236
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 108/220 (49%), Gaps = 29/220 (13%)
Query: 116 DEVLGSGGFGKVY--RAVLPSDGTV-VAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
D+V+G+G FG+V R LPS + VA+K L E+ + F E + H N++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
RL G +++V +YM N SLD L + Q ++RG+A+ + YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI------QLVGMLRGIASGMKYL 163
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
+ +HRD+ N++++S ++ DFGLAR LE + + A T
Sbjct: 164 SDM---GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPE--------------AAYT 206
Query: 292 TRIGGT-IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
TR G I + PE+ +A SDV+S+GIV+ EV+S
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSA-SDVWSYGIVLWEVMS 245
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 124/298 (41%), Gaps = 37/298 (12%)
Query: 505 FKEIISATNNFSESQRVAEMDFGTAYQGFLD----NHQYVLVKRLGMSKCPALRTRFSNE 560
F + + ATN S + V +FG G L V +K L + R F E
Sbjct: 38 FAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 561 LQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYN 620
+ + H N+++L G T+ ++++ +Y L L H +++Q
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQ---LVG 151
Query: 621 IIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKAT 680
+++ +AS + YL + +HR++ + I ++ ++ ++ F LA L +
Sbjct: 152 MLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTR 208
Query: 681 SGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVH 740
G +R + SPE I + TS +DV+S+G+V+ EV++ + + ++K V
Sbjct: 209 GGKIPIR----WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 264
Query: 741 EFEARKRPL---AELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
E P+ A L L L+ C + RP QI+SILD
Sbjct: 265 EGYRLPPPMDCPAALYQLMLD-----------------CWQKDRNNRPKFEQIVSILD 305
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 113/225 (50%), Gaps = 37/225 (16%)
Query: 116 DEVLGSGGFGKVYRAVLPSDG---TVVAVKCLAEKG---ERFEKTFAAELVAVAHLRHRN 169
+EV+G+G FG+V R L + G + VA+K L KG ER + F +E + H N
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTL--KGGYTERQRREFLSEASIMGQFEHPN 76
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL G + ++++ ++M N +LD L Q ++RG+A+ +
Sbjct: 77 IIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI------QLVGMLRGIASGMR 130
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
YL E +HRD+ N++++S ++ DFGL+R+LE TSS
Sbjct: 131 YLAEM---SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSS--------- 178
Query: 290 ETTRIGGTIG--YLPPE--SFQKGSVATAKSDVFSFGIVVLEVVS 330
+GG I + PE +F+K T+ SD +S+GIV+ EV+S
Sbjct: 179 ----LGGKIPIRWTAPEAIAFRK---FTSASDAWSYGIVMWEVMS 216
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 95/203 (46%), Gaps = 18/203 (8%)
Query: 525 DFGTAYQGFLD----NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCT 580
+FG +G L V +K L R F +E + + H N+++L G T
Sbjct: 26 EFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVT 85
Query: 581 EQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQV 640
++++ ++ L L N+ + +++Q +++ +AS + YL E
Sbjct: 86 NSMPVMILTEFMENGALDSFLRLNDGQF--TVIQ---LVGMLRGIASGMRYLAEM---SY 137
Query: 641 IHRNITSSAITLDPDMNPRLGSFALAEFLTRN--DHGHRKATSGNRSVRGIFGYMSPEYI 698
+HR++ + I ++ ++ ++ F L+ FL N D + + G +R + +PE I
Sbjct: 138 VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIR----WTAPEAI 193
Query: 699 ESGEATSMADVYSFGVVVLEVVT 721
+ TS +D +S+G+V+ EV++
Sbjct: 194 AFRKFTSASDAWSYGIVMWEVMS 216
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 109/216 (50%), Gaps = 26/216 (12%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKT--FAAELVAVAHLRHRNLVRLR 174
E +G+G FG V+RA G+ VAVK L E+ E+ F E+ + LRH N+V
Sbjct: 43 EKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 175 GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQ 234
G L +V +Y+ SL R+L + A L+ +R + +A ++YLH +
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKS----GAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 235 LETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRI 294
I+HR++K+ N+++D +Y ++ DFGL+R ++ S+ +
Sbjct: 157 -NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR---------LKAST-------FLSSKSA 199
Query: 295 GGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
GT ++ PE + + KSDV+SFG+++ E+ +
Sbjct: 200 AGTPEWMAPEVL-RDEPSNEKSDVYSFGVILWELAT 234
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 15/169 (8%)
Query: 557 FSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWH 616
F E+ + RLRH N+V G T+ + ++ +Y + L LL + R L
Sbjct: 81 FLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAR---EQLDER 137
Query: 617 HRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGH 676
R ++ +A + YLH N ++HRN+ S + +D ++ F L+
Sbjct: 138 RRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL-------- 188
Query: 677 RKATS--GNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
KA++ ++S G +M+PE + + +DVYSFGV++ E+ T Q
Sbjct: 189 -KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQ 236
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 108/220 (49%), Gaps = 29/220 (13%)
Query: 116 DEVLGSGGFGKVY--RAVLPSDGTV-VAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
D+V+G+G FG+V R LPS + VA+K L E+ + F E + H N++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
RL G +++V +YM N SLD L + Q ++RG+A+ + YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI------QLVGMLRGIASGMKYL 163
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
+ +HRD+ N++++S ++ DFGL+R LE + + A T
Sbjct: 164 SDM---GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE--------------AAYT 206
Query: 292 TRIGGT-IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
TR G I + PE+ +A SDV+S+GIV+ EV+S
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSA-SDVWSYGIVLWEVMS 245
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 124/298 (41%), Gaps = 37/298 (12%)
Query: 505 FKEIISATNNFSESQRVAEMDFGTAYQGFLD----NHQYVLVKRLGMSKCPALRTRFSNE 560
F + + ATN S + V +FG G L V +K L + R F E
Sbjct: 38 FAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 561 LQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYN 620
+ + H N+++L G T+ ++++ +Y L L H +++Q
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQ---LVG 151
Query: 621 IIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKAT 680
+++ +AS + YL + +HR++ + I ++ ++ ++ F L+ L +
Sbjct: 152 MLRGIASGMKYLSDM---GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 681 SGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVH 740
G +R + SPE I + TS +DV+S+G+V+ EV++ + + ++K V
Sbjct: 209 GGKIPIR----WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 264
Query: 741 EFEARKRPL---AELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
E P+ A L L L+ C + RP QI+SILD
Sbjct: 265 EGYRLPPPMDCPAALYQLMLD-----------------CWQKDRNNRPKFEQIVSILD 305
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 108/220 (49%), Gaps = 29/220 (13%)
Query: 116 DEVLGSGGFGKVY--RAVLPSDGTV-VAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
D+V+G+G FG+V R LPS + VA+K L E+ + F E + H N++
Sbjct: 48 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 107
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
RL G +++V +YM N SLD L + Q ++RG+A+ + YL
Sbjct: 108 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI------QLVGMLRGIASGMKYL 161
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
+ +HRD+ N++++S ++ DFGL+R LE + + A T
Sbjct: 162 SDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE--------------AAYT 204
Query: 292 TRIGGT-IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
TR G I + PE+ +A SDV+S+GIV+ EV+S
Sbjct: 205 TRGGKIPIRWTSPEAIAYRKFTSA-SDVWSYGIVLWEVMS 243
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 124/298 (41%), Gaps = 37/298 (12%)
Query: 505 FKEIISATNNFSESQRVAEMDFGTAYQGFLD----NHQYVLVKRLGMSKCPALRTRFSNE 560
F + + ATN S + V +FG G L V +K L + R F E
Sbjct: 36 FAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 94
Query: 561 LQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYN 620
+ + H N+++L G T+ ++++ +Y L L H +++Q
Sbjct: 95 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQ---LVG 149
Query: 621 IIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKAT 680
+++ +AS + YL + +HR++ + I ++ ++ ++ F L+ L +
Sbjct: 150 MLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 206
Query: 681 SGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVH 740
G +R + SPE I + TS +DV+S+G+V+ EV++ + + ++K V
Sbjct: 207 GGKIPIR----WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 262
Query: 741 EFEARKRPL---AELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
E P+ A L L L+ C + RP QI+SILD
Sbjct: 263 EGYRLPPPMDCPAALYQLMLD-----------------CWQKDRNNRPKFEQIVSILD 303
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 108/220 (49%), Gaps = 29/220 (13%)
Query: 116 DEVLGSGGFGKVY--RAVLPSDGTV-VAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
D+V+G+G FG+V R LPS + VA+K L E+ + F E + H N++
Sbjct: 21 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
RL G +++V +YM N SLD L + Q ++RG+A+ + YL
Sbjct: 81 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI------QLVGMLRGIASGMKYL 134
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
+ +HRD+ N++++S ++ DFGL+R LE + + A T
Sbjct: 135 SDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE--------------AAYT 177
Query: 292 TRIGGT-IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
TR G I + PE+ +A SDV+S+GIV+ EV+S
Sbjct: 178 TRGGKIPIRWTSPEAIAYRKFTSA-SDVWSYGIVLWEVMS 216
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 124/298 (41%), Gaps = 37/298 (12%)
Query: 505 FKEIISATNNFSESQRVAEMDFGTAYQGFLD----NHQYVLVKRLGMSKCPALRTRFSNE 560
F + + ATN S + V +FG G L V +K L + R F E
Sbjct: 9 FAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 67
Query: 561 LQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYN 620
+ + H N+++L G T+ ++++ +Y L L H +++Q
Sbjct: 68 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQ---LVG 122
Query: 621 IIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKAT 680
+++ +AS + YL + +HR++ + I ++ ++ ++ F L+ L +
Sbjct: 123 MLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
Query: 681 SGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVH 740
G +R + SPE I + TS +DV+S+G+V+ EV++ + + ++K V
Sbjct: 180 GGKIPIR----WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 235
Query: 741 EFEARKRPL---AELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
E P+ A L L L+ C + RP QI+SILD
Sbjct: 236 EGYRLPPPMDCPAALYQLMLD-----------------CWQKDRNNRPKFEQIVSILD 276
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 28/219 (12%)
Query: 117 EVLGSGGFGKVYRAVLPSDG----TVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
+V+G+G FG+VY+ +L + VA+K L A E+ F E + H N++
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
RL G ++++ +YM N +LD+ L E + Q ++RG+AA + YL
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFL------REKDGEFSVLQLVGMLRGIAAGMKYL 163
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
+HRD+ N++++S ++ DFGL+R LE + + TS +
Sbjct: 164 ANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI-------- 212
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
I + PE+ +A SDV+SFGIV+ EV++
Sbjct: 213 -----PIRWTAPEAISYRKFTSA-SDVWSFGIVMWEVMT 245
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 92/202 (45%), Gaps = 17/202 (8%)
Query: 525 DFGTAYQGFLDNHQ-----YVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWC 579
+FG Y+G L V +K L R F E + + H N+++L G
Sbjct: 56 EFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVI 115
Query: 580 TEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQ 639
++ M++I +Y L L + S+LQ +++ +A+ + YL N
Sbjct: 116 SKYKPMMIITEYMENGALDKFLREKDGEF--SVLQL---VGMLRGIAAGMKYLA---NMN 167
Query: 640 VIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIE 699
+HR++ + I ++ ++ ++ F L+ L + + G +R + +PE I
Sbjct: 168 YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIR----WTAPEAIS 223
Query: 700 SGEATSMADVYSFGVVVLEVVT 721
+ TS +DV+SFG+V+ EV+T
Sbjct: 224 YRKFTSASDVWSFGIVMWEVMT 245
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 108/220 (49%), Gaps = 29/220 (13%)
Query: 116 DEVLGSGGFGKVY--RAVLPSDGTV-VAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
D+V+G+G FG+V R LPS + VA+K L E+ + F E + H N++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
RL G +++V +YM N SLD L + Q ++RG+A+ + YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI------QLVGMLRGIASGMKYL 163
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
+ +HRD+ N++++S ++ DFGL+R LE + + A T
Sbjct: 164 SDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE--------------AAYT 206
Query: 292 TRIGGT-IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
TR G I + PE+ +A SDV+S+GIV+ EV+S
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSA-SDVWSYGIVLWEVMS 245
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 124/298 (41%), Gaps = 37/298 (12%)
Query: 505 FKEIISATNNFSESQRVAEMDFGTAYQGFLD----NHQYVLVKRLGMSKCPALRTRFSNE 560
F + + ATN S + V +FG G L V +K L + R F E
Sbjct: 38 FAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 561 LQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYN 620
+ + H N+++L G T+ ++++ +Y L L H +++Q
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQ---LVG 151
Query: 621 IIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKAT 680
+++ +AS + YL + +HR++ + I ++ ++ ++ F L+ L +
Sbjct: 152 MLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 681 SGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVH 740
G +R + SPE I + TS +DV+S+G+V+ EV++ + + ++K V
Sbjct: 209 GGKIPIR----WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 264
Query: 741 EFEARKRPL---AELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
E P+ A L L L+ C + RP QI+SILD
Sbjct: 265 EGYRLPPPMDCPAALYQLMLD-----------------CWQKDRNNRPKFEQIVSILD 305
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 108/220 (49%), Gaps = 29/220 (13%)
Query: 116 DEVLGSGGFGKVY--RAVLPSDGTV-VAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
D+V+G+G FG+V R LPS + VA+K L E+ + F E + H N++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
RL G +++V +YM N SLD L + Q ++RG+A+ + YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI------QLVGMLRGIASGMKYL 163
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
+ +HRD+ N++++S ++ DFGL+R LE + + A T
Sbjct: 164 SDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE--------------AAYT 206
Query: 292 TRIGGT-IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
TR G I + PE+ +A SDV+S+GIV+ EV+S
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSA-SDVWSYGIVLWEVMS 245
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 124/298 (41%), Gaps = 37/298 (12%)
Query: 505 FKEIISATNNFSESQRVAEMDFGTAYQGFLD----NHQYVLVKRLGMSKCPALRTRFSNE 560
F + + ATN S + V +FG G L V +K L + R F E
Sbjct: 38 FAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 561 LQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYN 620
+ + H N+++L G T+ ++++ +Y L L H +++Q
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQ---LVG 151
Query: 621 IIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKAT 680
+++ +AS + YL + +HR++ + I ++ ++ ++ F L+ L +
Sbjct: 152 MLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 681 SGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVH 740
G +R + SPE I + TS +DV+S+G+V+ EV++ + + ++K V
Sbjct: 209 GGKIPIR----WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 264
Query: 741 EFEARKRPL---AELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
E P+ A L L L+ C + RP QI+SILD
Sbjct: 265 EGYRLPPPMDCPAALYQLMLD-----------------CWQKDRNNRPKFEQIVSILD 305
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 108/220 (49%), Gaps = 29/220 (13%)
Query: 116 DEVLGSGGFGKVY--RAVLPSDGTV-VAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
D+V+G+G FG+V R LPS + VA+K L E+ + F E + H N++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
RL G +++V +YM N SLD L + Q ++RG+A+ + YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI------QLVGMLRGIASGMKYL 163
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
+ +HRD+ N++++S ++ DFGL+R LE + + A T
Sbjct: 164 SDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE--------------AAYT 206
Query: 292 TRIGGT-IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
TR G I + PE+ +A SDV+S+GIV+ EV+S
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSA-SDVWSYGIVLWEVMS 245
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 124/298 (41%), Gaps = 37/298 (12%)
Query: 505 FKEIISATNNFSESQRVAEMDFGTAYQGFLD----NHQYVLVKRLGMSKCPALRTRFSNE 560
F + + ATN S + V +FG G L V +K L + R F E
Sbjct: 38 FAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 561 LQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYN 620
+ + H N+++L G T+ ++++ +Y L L H +++Q
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQ---LVG 151
Query: 621 IIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKAT 680
+++ +AS + YL + +HR++ + I ++ ++ ++ F L+ L +
Sbjct: 152 MLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 681 SGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVH 740
G +R + SPE I + TS +DV+S+G+V+ EV++ + + ++K V
Sbjct: 209 GGKIPIR----WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 264
Query: 741 EFEARKRPL---AELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
E P+ A L L L+ C + RP QI+SILD
Sbjct: 265 EGYRLPPPMDCPAALYQLMLD-----------------CWQKDRNNRPKFEQIVSILD 305
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 108/220 (49%), Gaps = 29/220 (13%)
Query: 116 DEVLGSGGFGKVY--RAVLPSDGTV-VAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
D+V+G+G FG+V R LPS + VA+K L E+ + F E + H N++
Sbjct: 38 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 97
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
RL G +++V +YM N SLD L + Q ++RG+A+ + YL
Sbjct: 98 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI------QLVGMLRGIASGMKYL 151
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
+ +HRD+ N++++S ++ DFGL+R LE + + A T
Sbjct: 152 SDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE--------------AAYT 194
Query: 292 TRIGGT-IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
TR G I + PE+ +A SDV+S+GIV+ EV+S
Sbjct: 195 TRGGKIPIRWTSPEAIAYRKFTSA-SDVWSYGIVLWEVMS 233
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 124/298 (41%), Gaps = 37/298 (12%)
Query: 505 FKEIISATNNFSESQRVAEMDFGTAYQGFLD----NHQYVLVKRLGMSKCPALRTRFSNE 560
F + + ATN S + V +FG G L V +K L + R F E
Sbjct: 26 FAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 84
Query: 561 LQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYN 620
+ + H N+++L G T+ ++++ +Y L L H +++Q
Sbjct: 85 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQ---LVG 139
Query: 621 IIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKAT 680
+++ +AS + YL + +HR++ + I ++ ++ ++ F L+ L +
Sbjct: 140 MLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 196
Query: 681 SGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVH 740
G +R + SPE I + TS +DV+S+G+V+ EV++ + + ++K V
Sbjct: 197 GGKIPIR----WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 252
Query: 741 EFEARKRPL---AELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
E P+ A L L L+ C + RP QI+SILD
Sbjct: 253 EGYRLPPPMDCPAALYQLMLD-----------------CWQKDRNNRPKFEQIVSILD 293
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 108/220 (49%), Gaps = 29/220 (13%)
Query: 116 DEVLGSGGFGKVY--RAVLPSDGTV-VAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
D+V+G+G FG+V R LPS + VA+K L E+ + F E + H N++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
RL G +++V +YM N SLD L + Q ++RG+A+ + YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI------QLVGMLRGIASGMKYL 163
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
+ +HRD+ N++++S ++ DFGL+R LE + + A T
Sbjct: 164 SDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE--------------AAYT 206
Query: 292 TRIGGT-IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
TR G I + PE+ +A SDV+S+GIV+ EV+S
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSA-SDVWSYGIVLWEVMS 245
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 124/298 (41%), Gaps = 37/298 (12%)
Query: 505 FKEIISATNNFSESQRVAEMDFGTAYQGFLD----NHQYVLVKRLGMSKCPALRTRFSNE 560
F + + ATN S + V +FG G L V +K L + R F E
Sbjct: 38 FAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 561 LQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYN 620
+ + H N+++L G T+ ++++ +Y L L H +++Q
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQ---LVG 151
Query: 621 IIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKAT 680
+++ +AS + YL + +HR++ + I ++ ++ ++ F L+ L +
Sbjct: 152 MLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 681 SGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVH 740
G +R + SPE I + TS +DV+S+G+V+ EV++ + + ++K V
Sbjct: 209 GGKIPIR----WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 264
Query: 741 EFEARKRPL---AELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
E P+ A L L L+ C + RP QI+SILD
Sbjct: 265 EGYRLPPPMDCPAALYQLMLD-----------------CWQKDRNNRPKFEQIVSILD 305
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 107/220 (48%), Gaps = 29/220 (13%)
Query: 116 DEVLGSGGFGKVY--RAVLPSDGTV-VAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
D+V+G+G FG+V R LPS + VA+K L E+ + F E + H N++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
RL G +++V +YM N SLD L + Q ++RG+A+ + YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI------QLVGMLRGIASGMKYL 163
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
+ +HRD+ N++++S ++ DFGL R LE + + A T
Sbjct: 164 SDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPE--------------AAYT 206
Query: 292 TRIGGT-IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
TR G I + PE+ +A SDV+S+GIV+ EV+S
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSA-SDVWSYGIVLWEVMS 245
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 123/298 (41%), Gaps = 37/298 (12%)
Query: 505 FKEIISATNNFSESQRVAEMDFGTAYQGFLD----NHQYVLVKRLGMSKCPALRTRFSNE 560
F + + ATN S + V +FG G L V +K L + R F E
Sbjct: 38 FAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 561 LQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYN 620
+ + H N+++L G T+ ++++ +Y L L H +++Q
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQ---LVG 151
Query: 621 IIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKAT 680
+++ +AS + YL + +HR++ + I ++ ++ ++ F L L +
Sbjct: 152 MLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTR 208
Query: 681 SGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVH 740
G +R + SPE I + TS +DV+S+G+V+ EV++ + + ++K V
Sbjct: 209 GGKIPIR----WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 264
Query: 741 EFEARKRPL---AELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
E P+ A L L L+ C + RP QI+SILD
Sbjct: 265 EGYRLPPPMDCPAALYQLMLD-----------------CWQKDRNNRPKFEQIVSILD 305
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 110/230 (47%), Gaps = 40/230 (17%)
Query: 119 LGSGGFGKVYRA----VLPS-DGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRL 173
LG G FGKV+ A + P+ D +VAVK L + K F E + +L+H ++V+
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 174 RGWCVHEDQLLLVYDYMPNRSLDRVL-FRRPENL--------EAAAPLNWEQRKKIIRGL 224
G C D L++V++YM + L++ L P+ + +A L Q I +
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 225 AAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNH 284
A+ + YL Q +HRD+ T N ++ + ++GDFG++R
Sbjct: 143 ASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSR------------------ 181
Query: 285 QFHLAETTRIGG----TIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ + R+GG I ++PPES T +SDV+SFG+++ E+ +
Sbjct: 182 DVYSTDYYRVGGHTMLPIRWMPPESIMYRKF-TTESDVWSFGVILWEIFT 230
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 111/253 (43%), Gaps = 32/253 (12%)
Query: 552 ALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSH----------LL 601
A R F E + L L+H ++V+ G C + ++++++Y L+ +L
Sbjct: 59 AARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMIL 118
Query: 602 FHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLG 661
R L +I +AS ++YL ++ +HR++ + + ++ ++G
Sbjct: 119 VDGQPRQAKGELGLSQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLVGANLLVKIG 175
Query: 662 SFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
F ++ + D+ +R +R +M PE I + T+ +DV+SFGV++ E+ T
Sbjct: 176 DFGMSRDVYSTDY-YRVGGHTMLPIR----WMPPESIMYRKFTTESDVWSFGVILWEIFT 230
Query: 722 GQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNP 781
F+L +++ + + +RP KE+ ++ + C P
Sbjct: 231 YGKQPWFQLSNTEVIECITQGRVLERP-----------RVCPKEVYDVM---LGCWQREP 276
Query: 782 ELRPSMRQILSIL 794
+ R ++++I IL
Sbjct: 277 QQRLNIKEIYKIL 289
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 113/234 (48%), Gaps = 31/234 (13%)
Query: 116 DEVLGSGGFGKVYRAVLPSDG---TVVAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLV 171
++V+G+G FG+V L G VA+K L E+ + F +E + H N++
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
L G ++++ ++M N SLD L + Q ++RG+AA + YL
Sbjct: 98 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVI------QLVGMLRGIAAGMKYL 151
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
+ +HRD+ N++++S ++ DFGL+R+LE + TS+
Sbjct: 152 ADM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSA----------- 197
Query: 292 TRIGGTIG--YLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAV-DLTYPD 341
+GG I + PE+ Q +A SDV+S+GIV+ EV+S G R D+T D
Sbjct: 198 --LGGKIPIRWTAPEAIQYRKFTSA-SDVWSYGIVMWEVMSYGERPYWDMTNQD 248
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 99/209 (47%), Gaps = 18/209 (8%)
Query: 519 QRVAEMDFGTAYQGFLD----NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQ 574
Q + +FG G L +V +K L R F +E + + H N++
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 575 LCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHE 634
L G T+ +++I ++ L L N+ + +++Q +++ +A+ + YL +
Sbjct: 99 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQF--TVIQL---VGMLRGIAAGMKYLAD 153
Query: 635 EWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRN--DHGHRKATSGNRSVRGIFGY 692
+HR++ + I ++ ++ ++ F L+ FL + D + A G +R +
Sbjct: 154 M---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIR----W 206
Query: 693 MSPEYIESGEATSMADVYSFGVVVLEVVT 721
+PE I+ + TS +DV+S+G+V+ EV++
Sbjct: 207 TAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 29/214 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G FGKVY+A G + A K + K E + + E+ +A H +V+L G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
H+ +L ++ ++ P ++D ++ LE L Q + + R + AL++LH + +
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIM------LELDRGLTEPQIQVVCRQMLEALNFLHSK---R 129
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
IIHRD+K NV++ + + RL DFG+ SA+N + L + GT
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGV---------------SAKNLK-TLQKRDSFIGTP 173
Query: 299 GYLPPESF----QKGSVATAKSDVFSFGIVVLEV 328
++ PE K + K+D++S GI ++E+
Sbjct: 174 YWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 103/237 (43%), Gaps = 33/237 (13%)
Query: 560 ELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRY 619
E++ LA H +V+L G G++ ++ ++ + ++ + + +Q
Sbjct: 58 EIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQ----- 112
Query: 620 NIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKA 679
+ + + A+ +LH ++++IHR++ + + + + + RL F ++ + K
Sbjct: 113 VVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSA-------KNLKT 162
Query: 680 TSGNRSVRGIFGYMSPEYI--ESGEATSM---ADVYSFGVVVLEVVTGQMAVDFRLPEGL 734
S G +M+PE + E+ + T AD++S G+ ++E+ + P +
Sbjct: 163 LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV 222
Query: 735 LVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQIL 791
L+K A+ P L + E+ +K+ + NPE RPS Q+L
Sbjct: 223 LLKI-----AKSDPPTLLTPSKWSVEFRD-----FLKIALD---KNPETRPSAAQLL 266
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 29/214 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G FGKVY+A G + A K + K E + + E+ +A H +V+L G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
H+ +L ++ ++ P ++D ++ LE L Q + + R + AL++LH + +
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIM------LELDRGLTEPQIQVVCRQMLEALNFLHSK---R 137
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
IIHRD+K NV++ + + RL DFG+ SA+N + L + GT
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGV---------------SAKNLK-TLQKRDSFIGTP 181
Query: 299 GYLPPESF----QKGSVATAKSDVFSFGIVVLEV 328
++ PE K + K+D++S GI ++E+
Sbjct: 182 YWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 103/237 (43%), Gaps = 33/237 (13%)
Query: 560 ELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRY 619
E++ LA H +V+L G G++ ++ ++ + ++ + + +Q
Sbjct: 66 EIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQ----- 120
Query: 620 NIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKA 679
+ + + A+ +LH ++++IHR++ + + + + + RL F ++ + K
Sbjct: 121 VVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSA-------KNLKT 170
Query: 680 TSGNRSVRGIFGYMSPEYI--ESGEATSM---ADVYSFGVVVLEVVTGQMAVDFRLPEGL 734
S G +M+PE + E+ + T AD++S G+ ++E+ + P +
Sbjct: 171 LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV 230
Query: 735 LVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQIL 791
L+K A+ P L + E+ +K+ + NPE RPS Q+L
Sbjct: 231 LLKI-----AKSDPPTLLTPSKWSVEFRD-----FLKIALD---KNPETRPSAAQLL 274
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 107/220 (48%), Gaps = 29/220 (13%)
Query: 116 DEVLGSGGFGKVY--RAVLPSDGTV-VAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
D+V+G+G FG+V R LPS + VA+K L E+ + F E + H N++
Sbjct: 21 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
RL G +++V + M N SLD L + Q ++RG+A+ + YL
Sbjct: 81 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI------QLVGMLRGIASGMKYL 134
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
+ +HRD+ N++++S ++ DFGL+R LE + + A T
Sbjct: 135 SDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE--------------AAYT 177
Query: 292 TRIGGT-IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
TR G I + PE+ +A SDV+S+GIV+ EV+S
Sbjct: 178 TRGGKIPIRWTSPEAIAYRKFTSA-SDVWSYGIVLWEVMS 216
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 123/298 (41%), Gaps = 37/298 (12%)
Query: 505 FKEIISATNNFSESQRVAEMDFGTAYQGFLD----NHQYVLVKRLGMSKCPALRTRFSNE 560
F + + ATN S + V +FG G L V +K L + R F E
Sbjct: 9 FAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 67
Query: 561 LQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYN 620
+ + H N+++L G T+ ++++ + L L H +++Q
Sbjct: 68 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL--RKHDAQFTVIQ---LVG 122
Query: 621 IIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKAT 680
+++ +AS + YL + +HR++ + I ++ ++ ++ F L+ L +
Sbjct: 123 MLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
Query: 681 SGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVH 740
G +R + SPE I + TS +DV+S+G+V+ EV++ + + ++K V
Sbjct: 180 GGKIPIR----WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 235
Query: 741 EFEARKRPL---AELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
E P+ A L L L+ C + RP QI+SILD
Sbjct: 236 EGYRLPPPMDCPAALYQLMLD-----------------CWQKDRNNRPKFEQIVSILD 276
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 107/220 (48%), Gaps = 29/220 (13%)
Query: 116 DEVLGSGGFGKVY--RAVLPSDGTV-VAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
D+V+G+G FG+V R LPS + VA+K L E+ + F E + H N++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
RL G +++V + M N SLD L + Q ++RG+A+ + YL
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI------QLVGMLRGIASGMKYL 163
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
+ +HRD+ N++++S ++ DFGL+R LE + + A T
Sbjct: 164 SDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE--------------AAYT 206
Query: 292 TRIGGT-IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
TR G I + PE+ +A SDV+S+GIV+ EV+S
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSA-SDVWSYGIVLWEVMS 245
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 123/298 (41%), Gaps = 37/298 (12%)
Query: 505 FKEIISATNNFSESQRVAEMDFGTAYQGFLD----NHQYVLVKRLGMSKCPALRTRFSNE 560
F + + ATN S + V +FG G L V +K L + R F E
Sbjct: 38 FAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 561 LQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYN 620
+ + H N+++L G T+ ++++ + L L H +++Q
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL--RKHDAQFTVIQ---LVG 151
Query: 621 IIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKAT 680
+++ +AS + YL + +HR++ + I ++ ++ ++ F L+ L +
Sbjct: 152 MLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 681 SGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVH 740
G +R + SPE I + TS +DV+S+G+V+ EV++ + + ++K V
Sbjct: 209 GGKIPIR----WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 264
Query: 741 EFEARKRPL---AELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
E P+ A L L L+ C + RP QI+SILD
Sbjct: 265 EGYRLPPPMDCPAALYQLMLD-----------------CWQKDRNNRPKFEQIVSILD 305
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 107/220 (48%), Gaps = 29/220 (13%)
Query: 116 DEVLGSGGFGKVY--RAVLPSDGTV-VAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
D+V+G+G FG+V R LPS + VA+K L E+ + F E + H N++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
RL G +++V + M N SLD L + Q ++RG+A+ + YL
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI------QLVGMLRGIASGMKYL 163
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
+ +HRD+ N++++S ++ DFGL+R LE + + A T
Sbjct: 164 SDM---GAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE--------------AAYT 206
Query: 292 TRIGGT-IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
TR G I + PE+ +A SDV+S+GIV+ EV+S
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSA-SDVWSYGIVLWEVMS 245
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 123/298 (41%), Gaps = 37/298 (12%)
Query: 505 FKEIISATNNFSESQRVAEMDFGTAYQGFLD----NHQYVLVKRLGMSKCPALRTRFSNE 560
F + + ATN S + V +FG G L V +K L + R F E
Sbjct: 38 FAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 561 LQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYN 620
+ + H N+++L G T+ ++++ + L L H +++Q
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL--RKHDAQFTVIQ---LVG 151
Query: 621 IIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKAT 680
+++ +AS + YL + +HR++ + I ++ ++ ++ F L+ L +
Sbjct: 152 MLRGIASGMKYLSDM---GAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 681 SGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVH 740
G +R + SPE I + TS +DV+S+G+V+ EV++ + + ++K V
Sbjct: 209 GGKIPIR----WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 264
Query: 741 EFEARKRPL---AELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
E P+ A L L L+ C + RP QI+SILD
Sbjct: 265 EGYRLPPPMDCPAALYQLMLD-----------------CWQKDRNNRPKFEQIVSILD 305
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 111/231 (48%), Gaps = 31/231 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
+GSG FG VY+ D V + A ++ + F E+ + RH N++ G+
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQ-AFKNEVGVLRKTRHVNILLFMGYST 78
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRK--KIIRGLAAALHYLHEQLE 236
+ QL +V + SL L A+ +E +K I R A + YLH +
Sbjct: 79 -KPQLAIVTQWCEGSSLYHHLH--------ASETKFEMKKLIDIARQTARGMDYLHAK-- 127
Query: 237 TQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGG 296
IIHRD+K++N+ L ++GDFGLA +++ + +HQF ++ G
Sbjct: 128 -SIIHRDLKSNNIFLHEDNTVKIGDFGLA---------TVKSRWSGSHQFE-----QLSG 172
Query: 297 TIGYLPPE--SFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII 345
+I ++ PE Q + + +SDV++FGIV+ E+++G+ DQII
Sbjct: 173 SILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII 223
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGMSK-CPALRTRFSNELQNLARLRHRNLVQLCG 577
QR+ FGT Y+G H V VK L ++ P F NE+ L + RH N++ G
Sbjct: 18 QRIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 75
Query: 578 WCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWN 637
+ T+ ++ ++ + L H L + + L +I + A + YLH +
Sbjct: 76 YSTKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKL-----IDIARQTARGMDYLHAK-- 127
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
+IHR++ S+ I L D ++G F LA +R H+ + G +M+PE
Sbjct: 128 -SIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQ-----FEQLSGSILWMAPEV 181
Query: 698 I---ESGEATSMADVYSFGVVVLEVVTGQM 724
I +S + +DVY+FG+V+ E++TGQ+
Sbjct: 182 IRMQDSNPYSFQSDVYAFGIVLYELMTGQL 211
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 111/247 (44%), Gaps = 47/247 (19%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRN 169
F+ LG G FG VY A ++A+K L + + E E+ +HLRH N
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL G+ ++ L+ +Y P ++ R L+ + + ++ I LA AL
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYR-------ELQKLSKFDEQRTATYITELANALS 125
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
Y H + ++IHRD+K N++L S ++ DFG W H SS R
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG---WSVHA------PSSRR------- 166
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRA--------------- 334
T + GT+ YLPPE + G + K D++S G++ E + G+
Sbjct: 167 --TTLCGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 223
Query: 335 VDLTYPD 341
V+ T+PD
Sbjct: 224 VEFTFPD 230
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 90/220 (40%), Gaps = 29/220 (13%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRL---GMSKCPALRTRFSNELQNLARL 567
A +F + + + FG Y +++L ++ + + + E++ + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDY----SATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
RH N+++L G+ + + +I +Y + R L L + R I
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------TYIT 118
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
LA+A+ Y H +++VIHR+I + L G +A+F +S
Sbjct: 119 ELANALSYCH---SKRVIHRDIKPENLLLG-----SAGELKIADF----GWSVHAPSSRR 166
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
++ G Y+ PE IE D++S GV+ E + G+
Sbjct: 167 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 111/247 (44%), Gaps = 47/247 (19%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRN 169
F+ LG G FG VY A ++A+K L + + E E+ +HLRH N
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL G+ ++ L+ +Y P ++ R L+ + + ++ I LA AL
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYR-------ELQKLSKFDEQRTATYITELANALS 122
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
Y H + ++IHRD+K N++L S ++ DFG W H SS R
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG---WSVHA------PSSRR------- 163
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRA--------------- 334
T + GT+ YLPPE + G + K D++S G++ E + G+
Sbjct: 164 --TELCGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 220
Query: 335 VDLTYPD 341
V+ T+PD
Sbjct: 221 VEFTFPD 227
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 89/220 (40%), Gaps = 29/220 (13%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRL---GMSKCPALRTRFSNELQNLARL 567
A +F + + + FG Y +++L ++ + + + E++ + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDY----SATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
RH N+++L G+ + + +I +Y + R L L + R I
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------TYIT 115
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
LA+A+ Y H +++VIHR+I + L G +A+F +S
Sbjct: 116 ELANALSYCH---SKRVIHRDIKPENLLLG-----SAGELKIADF----GWSVHAPSSRR 163
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
+ G Y+ PE IE D++S GV+ E + G+
Sbjct: 164 TELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 111/247 (44%), Gaps = 47/247 (19%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRN 169
F+ LG G FG VY A ++A+K L + + E E+ +HLRH N
Sbjct: 27 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 86
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL G+ ++ L+ +Y P ++ R L+ + + ++ I LA AL
Sbjct: 87 ILRLYGYFHDATRVYLILEYAPLGTVYR-------ELQKLSKFDEQRTATYITELANALS 139
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
Y H + ++IHRD+K N++L S ++ DFG W H SS R
Sbjct: 140 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG---WSVHA------PSSRR------- 180
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRA--------------- 334
T + GT+ YLPPE + G + K D++S G++ E + G+
Sbjct: 181 --TTLCGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 237
Query: 335 VDLTYPD 341
V+ T+PD
Sbjct: 238 VEFTFPD 244
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 90/220 (40%), Gaps = 29/220 (13%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRL---GMSKCPALRTRFSNELQNLARL 567
A +F + + + FG Y +++L ++ + + + E++ + L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDY----SATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
RH N+++L G+ + + +I +Y + R L L + R I
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------TYIT 132
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
LA+A+ Y H +++VIHR+I + L G +A+F +S
Sbjct: 133 ELANALSYCH---SKRVIHRDIKPENLLLG-----SAGELKIADF----GWSVHAPSSRR 180
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
++ G Y+ PE IE D++S GV+ E + G+
Sbjct: 181 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 111/247 (44%), Gaps = 47/247 (19%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRN 169
F+ LG G FG VY A ++A+K L + + E E+ +HLRH N
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL G+ ++ L+ +Y P ++ R L+ + + ++ I LA AL
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYR-------ELQKLSKFDEQRTATYITELANALS 123
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
Y H + ++IHRD+K N++L S ++ DFG W H SS R
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG---WSCHA------PSSRR------- 164
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRA--------------- 334
T + GT+ YLPPE + G + K D++S G++ E + G+
Sbjct: 165 --TTLSGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 221
Query: 335 VDLTYPD 341
V+ T+PD
Sbjct: 222 VEFTFPD 228
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 90/220 (40%), Gaps = 29/220 (13%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRL---GMSKCPALRTRFSNELQNLARL 567
A +F + + + FG Y +++L ++ + + + E++ + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDY----SATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
RH N+++L G+ + + +I +Y + R L L + R I
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------TYIT 116
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
LA+A+ Y H +++VIHR+I + L G +A+F +S
Sbjct: 117 ELANALSYCH---SKRVIHRDIKPENLLLG-----SAGELKIADF----GWSCHAPSSRR 164
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
++ G Y+ PE IE D++S GV+ E + G+
Sbjct: 165 TTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 111/247 (44%), Gaps = 47/247 (19%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRN 169
F+ LG G FG VY A ++A+K L + + E E+ +HLRH N
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL G+ ++ L+ +Y P ++ R L+ + + ++ I LA AL
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYR-------ELQKLSKFDEQRTATYITELANALS 127
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
Y H + ++IHRD+K N++L S ++ DFG W H SS R
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG---WSVHA------PSSRR------- 168
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRA--------------- 334
T + GT+ YLPPE + G + K D++S G++ E + G+
Sbjct: 169 --TTLCGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 225
Query: 335 VDLTYPD 341
V+ T+PD
Sbjct: 226 VEFTFPD 232
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 90/220 (40%), Gaps = 29/220 (13%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRL---GMSKCPALRTRFSNELQNLARL 567
A +F + + + FG Y +++L ++ + + + E++ + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDY----SATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
RH N+++L G+ + + +I +Y + R L L + R I
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------TYIT 120
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
LA+A+ Y H +++VIHR+I + L G +A+F +S
Sbjct: 121 ELANALSYCH---SKRVIHRDIKPENLLLG-----SAGELKIADF----GWSVHAPSSRR 168
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
++ G Y+ PE IE D++S GV+ E + G+
Sbjct: 169 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 111/247 (44%), Gaps = 47/247 (19%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRN 169
F+ LG G FG VY A ++A+K L + + E E+ +HLRH N
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL G+ ++ L+ +Y P ++ R L+ + + ++ I LA AL
Sbjct: 96 ILRLYGYFHDATRVYLILEYAPLGTVYR-------ELQKLSKFDEQRTATYITELANALS 148
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
Y H + ++IHRD+K N++L S ++ DFG W H SS R
Sbjct: 149 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG---WSVHA------PSSRR------- 189
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRA--------------- 334
T + GT+ YLPPE + G + K D++S G++ E + G+
Sbjct: 190 --TTLCGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 246
Query: 335 VDLTYPD 341
V+ T+PD
Sbjct: 247 VEFTFPD 253
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 90/220 (40%), Gaps = 29/220 (13%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRL---GMSKCPALRTRFSNELQNLARL 567
A +F + + + FG Y +++L ++ + + + E++ + L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDYSAT----RILSHLLFHNNHRIGHSILQWHHRYNIIK 623
RH N+++L G+ + + +I +Y+ R L L + R I
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------TYIT 141
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
LA+A+ Y H +++VIHR+I + L G +A+F +S
Sbjct: 142 ELANALSYCH---SKRVIHRDIKPENLLLG-----SAGELKIADF----GWSVHAPSSRR 189
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
++ G Y+ PE IE D++S GV+ E + G+
Sbjct: 190 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 112/247 (45%), Gaps = 47/247 (19%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRN 169
FD LG G FG VY A ++A+K L + + E E+ +HLRH N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL G+ ++ L+ +Y P ++ R L+ + + ++ I LA AL
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYR-------ELQKLSRFDEQRTATYITELANALS 126
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
Y H + ++IHRD+K N++L S ++ DFG + + S+R
Sbjct: 127 YCHSK---RVIHRDIKPENLLLGSNGELKIADFG----------WSVHAPSSRR------ 167
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG-------------RRA-- 334
T + GT+ YLPPE + G + K D++S G++ E + G RR
Sbjct: 168 --TTLCGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISR 224
Query: 335 VDLTYPD 341
V+ T+PD
Sbjct: 225 VEFTFPD 231
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 88/216 (40%), Gaps = 29/216 (13%)
Query: 514 NFSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMS---KCPALRTRFSNELQNLARLRHR 570
+F + + + FG Y +++L ++ + + + E++ + LRH
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 571 NLVQLCGWCTEQGEMLVIYDY----SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLA 626
N+++L G+ + + +I +Y + R L L + R I LA
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTA----------TYITELA 122
Query: 627 SAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSV 686
+A+ Y H +++VIHR+I + L + ++ F + +S ++
Sbjct: 123 NALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSV---------HAPSSRRTTL 170
Query: 687 RGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
G Y+ PE IE D++S GV+ E + G
Sbjct: 171 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 29/218 (13%)
Query: 119 LGSGGFGKV----YRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLR 174
LG G FG V Y + + G VVAVK L E + F E+ + L+H N+V+ +
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 175 GWCVHEDQ--LLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
G C + L L+ +Y+P SL L + E ++ L + + + + YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYLG 131
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETT 292
+ + IHRD+ T N++++++ ++GDFGL + L + ++ F + E
Sbjct: 132 TK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEF-----------FKVKEPG 177
Query: 293 RIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
I + PES + + A SDV+SFG+V+ E+ +
Sbjct: 178 E--SPIFWYAPESLTESKFSVA-SDVWSFGVVLYELFT 212
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 519 QRVAEMDFGTA----YQGFLDNH-QYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLV 573
Q++ + +FG+ Y DN + V VK+L S LR F E++ L L+H N+V
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIV 74
Query: 574 QLCGWCTEQG--EMLVIYDYSATRILSHLLFHNNHRIGH-SILQWHHRYNIIKSLASAIL 630
+ G C G + +I +Y L L + RI H +LQ+ + +
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY------TSQICKGME 128
Query: 631 YLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIF 690
YL ++ IHR++ + I ++ + ++G F L + L ++ + G IF
Sbjct: 129 YLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESP---IF 182
Query: 691 GYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
Y +PE + + + +DV+SFGVV+ E+ T
Sbjct: 183 WY-APESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 111/247 (44%), Gaps = 47/247 (19%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRN 169
F+ LG G FG VY A ++A+K L + + E E+ +HLRH N
Sbjct: 9 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 68
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL G+ ++ L+ +Y P ++ R L+ + + ++ I LA AL
Sbjct: 69 ILRLYGYFHDATRVYLILEYAPLGTVYR-------ELQKLSKFDEQRTATYITELANALS 121
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
Y H + ++IHRD+K N++L S ++ DFG + + S+R
Sbjct: 122 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----------WSVHAPSSRR------ 162
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRA--------------- 334
T + GT+ YLPPE + G + K D++S G++ E + G+
Sbjct: 163 --TTLCGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 219
Query: 335 VDLTYPD 341
V+ T+PD
Sbjct: 220 VEFTFPD 226
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 90/220 (40%), Gaps = 29/220 (13%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRL---GMSKCPALRTRFSNELQNLARL 567
A +F + + + FG Y +++L ++ + + + E++ + L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDY----SATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
RH N+++L G+ + + +I +Y + R L L + R I
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------TYIT 114
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
LA+A+ Y H +++VIHR+I + L G +A+F +S
Sbjct: 115 ELANALSYCH---SKRVIHRDIKPENLLLG-----SAGELKIADF----GWSVHAPSSRR 162
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
++ G Y+ PE IE D++S GV+ E + G+
Sbjct: 163 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 111/247 (44%), Gaps = 47/247 (19%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRN 169
F+ LG G FG VY A ++A+K L + + E E+ +HLRH N
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL G+ ++ L+ +Y P ++ R L+ + + ++ I LA AL
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYR-------ELQKLSKFDEQRTATYITELANALS 127
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
Y H + ++IHRD+K N++L S ++ DFG W H SS R
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG---WSVHA------PSSRR------- 168
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRA--------------- 334
T + GT+ YLPPE + G + K D++S G++ E + G+
Sbjct: 169 --TDLCGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 225
Query: 335 VDLTYPD 341
V+ T+PD
Sbjct: 226 VEFTFPD 232
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 90/221 (40%), Gaps = 31/221 (14%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRL---GMSKCPALRTRFSNELQNLARL 567
A +F + + + FG Y +++L ++ + + + E++ + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDY----SATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
RH N+++L G+ + + +I +Y + R L L + R I
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------TYIT 120
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
LA+A+ Y H +++VIHR+I + L ++ F + A S
Sbjct: 121 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----------HAPSSR 167
Query: 684 RS-VRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
R+ + G Y+ PE IE D++S GV+ E + G+
Sbjct: 168 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 111/247 (44%), Gaps = 47/247 (19%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRN 169
F+ LG G FG VY A ++A+K L + + E E+ +HLRH N
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL G+ ++ L+ +Y P ++ R L+ + + ++ I LA AL
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYR-------ELQKLSKFDEQRTATYITELANALS 122
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
Y H + ++IHRD+K N++L S ++ DFG W H SS R
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG---WSVHA------PSSRR------- 163
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRA--------------- 334
T + GT+ YLPPE + G + K D++S G++ E + G+
Sbjct: 164 --TTLCGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 220
Query: 335 VDLTYPD 341
V+ T+PD
Sbjct: 221 VEFTFPD 227
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 90/220 (40%), Gaps = 29/220 (13%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRL---GMSKCPALRTRFSNELQNLARL 567
A +F + + + FG Y +++L ++ + + + E++ + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDY----SATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
RH N+++L G+ + + +I +Y + R L L + R I
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------TYIT 115
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
LA+A+ Y H +++VIHR+I + L G +A+F +S
Sbjct: 116 ELANALSYCH---SKRVIHRDIKPENLLLG-----SAGELKIADF----GWSVHAPSSRR 163
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
++ G Y+ PE IE D++S GV+ E + G+
Sbjct: 164 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 111/247 (44%), Gaps = 47/247 (19%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRN 169
F+ LG G FG VY A ++A+K L + + E E+ +HLRH N
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL G+ ++ L+ +Y P ++ R L+ + + ++ I LA AL
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYR-------ELQKLSKFDEQRTATYITELANALS 125
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
Y H + ++IHRD+K N++L S ++ DFG W H SS R
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG---WSVHA------PSSRR------- 166
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRA--------------- 334
T + GT+ YLPPE + G + K D++S G++ E + G+
Sbjct: 167 --TTLCGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 223
Query: 335 VDLTYPD 341
V+ T+PD
Sbjct: 224 VEFTFPD 230
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 90/220 (40%), Gaps = 29/220 (13%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRL---GMSKCPALRTRFSNELQNLARL 567
A +F + + + FG Y +++L ++ + + + E++ + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDY----SATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
RH N+++L G+ + + +I +Y + R L L + R I
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------TYIT 118
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
LA+A+ Y H +++VIHR+I + L G +A+F +S
Sbjct: 119 ELANALSYCH---SKRVIHRDIKPENLLLG-----SAGELKIADF----GWSVHAPSSRR 166
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
++ G Y+ PE IE D++S GV+ E + G+
Sbjct: 167 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 111/247 (44%), Gaps = 47/247 (19%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRN 169
F+ LG G FG VY A ++A+K L + + E E+ +HLRH N
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL G+ ++ L+ +Y P ++ R L+ + + ++ I LA AL
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYR-------ELQKLSKFDEQRTATYITELANALS 122
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
Y H + ++IHRD+K N++L S ++ DFG W H SS R
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG---WSVHA------PSSRR------- 163
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRA--------------- 334
T + GT+ YLPPE + G + K D++S G++ E + G+
Sbjct: 164 --TDLCGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 220
Query: 335 VDLTYPD 341
V+ T+PD
Sbjct: 221 VEFTFPD 227
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 90/221 (40%), Gaps = 31/221 (14%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRL---GMSKCPALRTRFSNELQNLARL 567
A +F + + + FG Y +++L ++ + + + E++ + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDY----SATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
RH N+++L G+ + + +I +Y + R L L + R I
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------TYIT 115
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
LA+A+ Y H +++VIHR+I + L ++ F + A S
Sbjct: 116 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----------HAPSSR 162
Query: 684 RS-VRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
R+ + G Y+ PE IE D++S GV+ E + G+
Sbjct: 163 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 111/247 (44%), Gaps = 47/247 (19%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRN 169
F+ LG G FG VY A ++A+K L + + E E+ +HLRH N
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL G+ ++ L+ +Y P ++ R L+ + + ++ I LA AL
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYR-------ELQKLSKFDEQRTATYITELANALS 122
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
Y H + ++IHRD+K N++L S ++ DFG W H SS R
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG---WSVHA------PSSRR------- 163
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRA--------------- 334
T + GT+ YLPPE + G + K D++S G++ E + G+
Sbjct: 164 --TXLCGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 220
Query: 335 VDLTYPD 341
V+ T+PD
Sbjct: 221 VEFTFPD 227
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 90/221 (40%), Gaps = 31/221 (14%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRL---GMSKCPALRTRFSNELQNLARL 567
A +F + + + FG Y +++L ++ + + + E++ + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDY----SATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
RH N+++L G+ + + +I +Y + R L L + R I
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------TYIT 115
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
LA+A+ Y H +++VIHR+I + L ++ F + A S
Sbjct: 116 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----------HAPSSR 162
Query: 684 RS-VRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
R+ + G Y+ PE IE D++S GV+ E + G+
Sbjct: 163 RTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 109/231 (47%), Gaps = 27/231 (11%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
+GSG FG VY+ D V + A ++ + F E+ + RH N++ G+
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQ-AFKNEVGVLRKTRHVNILLFMGYST 74
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
+ QL +V + SL L E ++ I R A + YLH +
Sbjct: 75 -KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID------IARQTAQGMDYLHAK---S 124
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
IIHRD+K++N+ L ++GDFGLA +++ + +HQF ++ G+I
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLA---------TVKSRWSGSHQFE-----QLSGSI 170
Query: 299 GYLPPE--SFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
++ PE Q + + +SDV++FGIV+ E+++G+ DQII +
Sbjct: 171 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 221
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 20/210 (9%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGMS-KCPALRTRFSNELQNLARLRHRNLVQLCG 577
QR+ FGT Y+G H V VK L ++ P F NE+ L + RH N++ G
Sbjct: 14 QRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 578 WCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWN 637
+ T+ +V + + HL I + + +I + A + YLH +
Sbjct: 72 YSTKPQLAIVTQWCEGSSLYHHL------HIIETKFEMIKLIDIARQTAQGMDYLHAK-- 123
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
+IHR++ S+ I L D+ ++G F LA +R H+ + G +M+PE
Sbjct: 124 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ-----FEQLSGSILWMAPEV 177
Query: 698 I---ESGEATSMADVYSFGVVVLEVVTGQM 724
I + + +DVY+FG+V+ E++TGQ+
Sbjct: 178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQL 207
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 109/231 (47%), Gaps = 27/231 (11%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
+GSG FG VY+ D V + A ++ + F E+ + RH N++ G+
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQ-AFKNEVGVLRKTRHVNILLFMGYST 76
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
+ QL +V + SL L E ++ I R A + YLH +
Sbjct: 77 -KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID------IARQTAQGMDYLHAK---S 126
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
IIHRD+K++N+ L ++GDFGLA +++ + +HQF ++ G+I
Sbjct: 127 IIHRDLKSNNIFLHEDLTVKIGDFGLA---------TVKSRWSGSHQFE-----QLSGSI 172
Query: 299 GYLPPE--SFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
++ PE Q + + +SDV++FGIV+ E+++G+ DQII +
Sbjct: 173 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 223
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 20/210 (9%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGMS-KCPALRTRFSNELQNLARLRHRNLVQLCG 577
QR+ FGT Y+G H V VK L ++ P F NE+ L + RH N++ G
Sbjct: 16 QRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 73
Query: 578 WCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWN 637
+ T+ +V + + HL I + + +I + A + YLH +
Sbjct: 74 YSTKPQLAIVTQWCEGSSLYHHL------HIIETKFEMIKLIDIARQTAQGMDYLHAK-- 125
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
+IHR++ S+ I L D+ ++G F LA +R H+ + G +M+PE
Sbjct: 126 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ-----FEQLSGSILWMAPEV 179
Query: 698 I---ESGEATSMADVYSFGVVVLEVVTGQM 724
I + + +DVY+FG+V+ E++TGQ+
Sbjct: 180 IRMQDKNPYSFQSDVYAFGIVLYELMTGQL 209
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 109/231 (47%), Gaps = 27/231 (11%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
+GSG FG VY+ D V + A ++ + F E+ + RH N++ G+
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQ-AFKNEVGVLRKTRHVNILLFMGYST 79
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
+ QL +V + SL L E ++ I R A + YLH +
Sbjct: 80 -KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID------IARQTAQGMDYLHAK---S 129
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
IIHRD+K++N+ L ++GDFGLA +++ + +HQF ++ G+I
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLA---------TVKSRWSGSHQFE-----QLSGSI 175
Query: 299 GYLPPE--SFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
++ PE Q + + +SDV++FGIV+ E+++G+ DQII +
Sbjct: 176 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 226
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 20/210 (9%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGMS-KCPALRTRFSNELQNLARLRHRNLVQLCG 577
QR+ FGT Y+G H V VK L ++ P F NE+ L + RH N++ G
Sbjct: 19 QRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 578 WCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWN 637
+ T+ +V + + HL I + + +I + A + YLH +
Sbjct: 77 YSTKPQLAIVTQWCEGSSLYHHL------HIIETKFEMIKLIDIARQTAQGMDYLHAK-- 128
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
+IHR++ S+ I L D+ ++G F LA +R H+ + G +M+PE
Sbjct: 129 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ-----FEQLSGSILWMAPEV 182
Query: 698 I---ESGEATSMADVYSFGVVVLEVVTGQM 724
I + + +DVY+FG+V+ E++TGQ+
Sbjct: 183 IRMQDKNPYSFQSDVYAFGIVLYELMTGQL 212
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 110/235 (46%), Gaps = 39/235 (16%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
+GSG FG VY+ D V + A ++ + F E+ + RH N++ G+
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQ-AFKNEVGVLRKTRHVNILLFMGYST 90
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRK--KIIRGLAAALHYLHEQLE 236
+ QL +V + SL L A+ +E +K I R A + YLH +
Sbjct: 91 -KPQLAIVTQWCEGSSLYHHLH--------ASETKFEMKKLIDIARQTARGMDYLHAK-- 139
Query: 237 TQIIHRDVKTSNVMLDSQYNARLGDFGLA----RWLEHELQYQMRTSSARNHQFHLAETT 292
IIHRD+K++N+ L ++GDFGLA RW + +HQF
Sbjct: 140 -SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW-------------SGSHQFE----- 180
Query: 293 RIGGTIGYLPPE--SFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII 345
++ G+I ++ PE Q + + +SDV++FGIV+ E+++G+ DQII
Sbjct: 181 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII 235
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGMSK-CPALRTRFSNELQNLARLRHRNLVQLCG 577
QR+ FGT Y+G H V VK L ++ P F NE+ L + RH N++ G
Sbjct: 30 QRIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 578 WCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWN 637
+ T+ ++ ++ + L H L + + L +I + A + YLH +
Sbjct: 88 YSTKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKL-----IDIARQTARGMDYLHAK-- 139
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
+IHR++ S+ I L D ++G F LA +R H+ + G +M+PE
Sbjct: 140 -SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ-----FEQLSGSILWMAPEV 193
Query: 698 I---ESGEATSMADVYSFGVVVLEVVTGQM 724
I +S + +DVY+FG+V+ E++TGQ+
Sbjct: 194 IRMQDSNPYSFQSDVYAFGIVLYELMTGQL 223
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 111/247 (44%), Gaps = 47/247 (19%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRN 169
F+ LG G FG VY A ++A+K L + + E E+ +HLRH N
Sbjct: 14 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL G+ ++ L+ +Y P ++ R L+ + + ++ I LA AL
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYR-------ELQKLSKFDEQRTATYITELANALS 126
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
Y H + ++IHRD+K N++L S ++ DFG W H SS R
Sbjct: 127 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG---WSVHA------PSSRR------- 167
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRA--------------- 334
T + GT+ YLPPE + G + K D++S G++ E + G+
Sbjct: 168 --TTLCGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 224
Query: 335 VDLTYPD 341
V+ T+PD
Sbjct: 225 VEFTFPD 231
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 90/220 (40%), Gaps = 29/220 (13%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRL---GMSKCPALRTRFSNELQNLARL 567
A +F + + + FG Y +++L ++ + + + E++ + L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDY----SATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
RH N+++L G+ + + +I +Y + R L L + R I
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------TYIT 119
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
LA+A+ Y H +++VIHR+I + L G +A+F +S
Sbjct: 120 ELANALSYCH---SKRVIHRDIKPENLLLG-----SAGELKIADF----GWSVHAPSSRR 167
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
++ G Y+ PE IE D++S GV+ E + G+
Sbjct: 168 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 111/247 (44%), Gaps = 47/247 (19%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRN 169
F+ LG G FG VY A ++A+K L + + E E+ +HLRH N
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL G+ ++ L+ +Y P ++ R L+ + + ++ I LA AL
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYR-------ELQKLSKFDEQRTATYITELANALS 122
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
Y H + ++IHRD+K N++L S ++ DFG W H SS R
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG---WSVHA------PSSRR------- 163
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRA--------------- 334
T + GT+ YLPPE + G + K D++S G++ E + G+
Sbjct: 164 --TDLCGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 220
Query: 335 VDLTYPD 341
V+ T+PD
Sbjct: 221 VEFTFPD 227
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 90/221 (40%), Gaps = 31/221 (14%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRL---GMSKCPALRTRFSNELQNLARL 567
A +F + + + FG Y +++L ++ + + + E++ + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDY----SATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
RH N+++L G+ + + +I +Y + R L L + R I
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------TYIT 115
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
LA+A+ Y H +++VIHR+I + L ++ F + A S
Sbjct: 116 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----------HAPSSR 162
Query: 684 RS-VRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
R+ + G Y+ PE IE D++S GV+ E + G+
Sbjct: 163 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 112/234 (47%), Gaps = 31/234 (13%)
Query: 116 DEVLGSGGFGKVYRAVLPSDG---TVVAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLV 171
++V+G+G FG+V L G VA+K L E+ + F +E + H N++
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
L G ++++ ++M N SLD L + Q ++RG+AA + YL
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVI------QLVGMLRGIAAGMKYL 125
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
+ +HR + N++++S ++ DFGL+R+LE + TS+
Sbjct: 126 ADM---NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSA----------- 171
Query: 292 TRIGGTIG--YLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAV-DLTYPD 341
+GG I + PE+ Q +A SDV+S+GIV+ EV+S G R D+T D
Sbjct: 172 --LGGKIPIRWTAPEAIQYRKFTSA-SDVWSYGIVMWEVMSYGERPYWDMTNQD 222
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 98/209 (46%), Gaps = 18/209 (8%)
Query: 519 QRVAEMDFGTAYQGFLD----NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQ 574
Q + +FG G L +V +K L R F +E + + H N++
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 575 LCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHE 634
L G T+ +++I ++ L L N+ + +++Q +++ +A+ + YL +
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQF--TVIQ---LVGMLRGIAAGMKYLAD 127
Query: 635 EWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRN--DHGHRKATSGNRSVRGIFGY 692
+HR + + I ++ ++ ++ F L+ FL + D + A G +R +
Sbjct: 128 M---NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIR----W 180
Query: 693 MSPEYIESGEATSMADVYSFGVVVLEVVT 721
+PE I+ + TS +DV+S+G+V+ EV++
Sbjct: 181 TAPEAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 109/231 (47%), Gaps = 27/231 (11%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
+GSG FG VY+ D V + A ++ + F E+ + RH N++ G+
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQ-AFKNEVGVLRKTRHVNILLFMGYST 79
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
+ QL +V + SL L E ++ I R A + YLH +
Sbjct: 80 -KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID------IARQTAQGMDYLHAK---S 129
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
IIHRD+K++N+ L ++GDFGLA +++ + +HQF ++ G+I
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLA---------TVKSRWSGSHQFE-----QLSGSI 175
Query: 299 GYLPPE--SFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
++ PE Q + + +SDV++FGIV+ E+++G+ DQII +
Sbjct: 176 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 226
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 20/210 (9%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGMS-KCPALRTRFSNELQNLARLRHRNLVQLCG 577
QR+ FGT Y+G H V VK L ++ P F NE+ L + RH N++ G
Sbjct: 19 QRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 578 WCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWN 637
+ T+ +V + + HL I + + +I + A + YLH +
Sbjct: 77 YSTKPQLAIVTQWCEGSSLYHHL------HIIETKFEMIKLIDIARQTAQGMDYLHAK-- 128
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
+IHR++ S+ I L D+ ++G F LA +R H+ + G +M+PE
Sbjct: 129 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ-----FEQLSGSILWMAPEV 182
Query: 698 I---ESGEATSMADVYSFGVVVLEVVTGQM 724
I + + +DVY+FG+V+ E++TGQ+
Sbjct: 183 IRMQDKNPYSFQSDVYAFGIVLYELMTGQL 212
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 109/231 (47%), Gaps = 27/231 (11%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
+GSG FG VY+ D V + A ++ + F E+ + RH N++ G+
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQ-AFKNEVGVLRKTRHVNILLFMGYST 102
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
+ QL +V + SL L E ++ I R A + YLH +
Sbjct: 103 -KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID------IARQTAQGMDYLHAK---S 152
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
IIHRD+K++N+ L ++GDFGLA +++ + +HQF ++ G+I
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLA---------TVKSRWSGSHQFE-----QLSGSI 198
Query: 299 GYLPPE--SFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
++ PE Q + + +SDV++FGIV+ E+++G+ DQII +
Sbjct: 199 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 249
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 20/210 (9%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGMSK-CPALRTRFSNELQNLARLRHRNLVQLCG 577
QR+ FGT Y+G H V VK L ++ P F NE+ L + RH N++ G
Sbjct: 42 QRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 578 WCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWN 637
+ T+ +V + + HL I + + +I + A + YLH +
Sbjct: 100 YSTKPQLAIVTQWCEGSSLYHHL------HIIETKFEMIKLIDIARQTAQGMDYLHAK-- 151
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
+IHR++ S+ I L D+ ++G F LA +R H+ + G +M+PE
Sbjct: 152 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ-----FEQLSGSILWMAPEV 205
Query: 698 I---ESGEATSMADVYSFGVVVLEVVTGQM 724
I + + +DVY+FG+V+ E++TGQ+
Sbjct: 206 IRMQDKNPYSFQSDVYAFGIVLYELMTGQL 235
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 111/247 (44%), Gaps = 47/247 (19%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRN 169
F+ LG G FG VY A ++A+K L + + E E+ +HLRH N
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL G+ ++ L+ +Y P ++ R L+ + + ++ I LA AL
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYR-------ELQKLSKFDEQRTATYITELANALS 123
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
Y H + ++IHRD+K N++L S ++ DFG W H SS R
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG---WSVHA------PSSRR------- 164
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRA--------------- 334
T + GT+ YLPPE + G + K D++S G++ E + G+
Sbjct: 165 --TDLCGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 221
Query: 335 VDLTYPD 341
V+ T+PD
Sbjct: 222 VEFTFPD 228
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 90/221 (40%), Gaps = 31/221 (14%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRL---GMSKCPALRTRFSNELQNLARL 567
A +F + + + FG Y +++L ++ + + + E++ + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDY----SATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
RH N+++L G+ + + +I +Y + R L L + R I
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------TYIT 116
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
LA+A+ Y H +++VIHR+I + L ++ F + A S
Sbjct: 117 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----------HAPSSR 163
Query: 684 RS-VRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
R+ + G Y+ PE IE D++S GV+ E + G+
Sbjct: 164 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 109/231 (47%), Gaps = 27/231 (11%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
+GSG FG VY+ D V + A ++ + F E+ + RH N++ G+
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQ-AFKNEVGVLRKTRHVNILLFMGYST 101
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
+ QL +V + SL L E ++ I R A + YLH +
Sbjct: 102 -KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID------IARQTAQGMDYLHAK---S 151
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
IIHRD+K++N+ L ++GDFGLA +++ + +HQF ++ G+I
Sbjct: 152 IIHRDLKSNNIFLHEDLTVKIGDFGLA---------TVKSRWSGSHQFE-----QLSGSI 197
Query: 299 GYLPPE--SFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
++ PE Q + + +SDV++FGIV+ E+++G+ DQII +
Sbjct: 198 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 248
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 20/210 (9%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGMS-KCPALRTRFSNELQNLARLRHRNLVQLCG 577
QR+ FGT Y+G H V VK L ++ P F NE+ L + RH N++ G
Sbjct: 41 QRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 98
Query: 578 WCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWN 637
+ T+ +V + + HL I + + +I + A + YLH +
Sbjct: 99 YSTKPQLAIVTQWCEGSSLYHHL------HIIETKFEMIKLIDIARQTAQGMDYLHAK-- 150
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
+IHR++ S+ I L D+ ++G F LA +R H+ + G +M+PE
Sbjct: 151 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ-----FEQLSGSILWMAPEV 204
Query: 698 I---ESGEATSMADVYSFGVVVLEVVTGQM 724
I + + +DVY+FG+V+ E++TGQ+
Sbjct: 205 IRMQDKNPYSFQSDVYAFGIVLYELMTGQL 234
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 110/247 (44%), Gaps = 47/247 (19%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRN 169
F+ LG G FG VY A ++A+K L + + E E+ +HLRH N
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL G+ ++ L+ +Y P ++ R L+ + + ++ I LA AL
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYR-------ELQKLSKFDEQRTATYITELANALS 127
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
Y H + ++IHRD+K N++L S ++ DFG + + S+R
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----------WSVHAPSSRR------ 168
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRA--------------- 334
T + GT+ YLPPE + G K D++S G++ E + G+
Sbjct: 169 --TTLCGTLDYLPPEXIE-GRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 225
Query: 335 VDLTYPD 341
V+ T+PD
Sbjct: 226 VEFTFPD 232
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 90/220 (40%), Gaps = 29/220 (13%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRL---GMSKCPALRTRFSNELQNLARL 567
A +F + + + FG Y +++L ++ + + + E++ + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDY----SATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
RH N+++L G+ + + +I +Y + R L L + R I
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------TYIT 120
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
LA+A+ Y H +++VIHR+I + L G +A+F +S
Sbjct: 121 ELANALSYCH---SKRVIHRDIKPENLLLG-----SAGELKIADF----GWSVHAPSSRR 168
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
++ G Y+ PE IE D++S GV+ E + G+
Sbjct: 169 TTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 116/250 (46%), Gaps = 36/250 (14%)
Query: 94 GGDNPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVV--AVKCLAEKGERF 151
G +NP Y L N +V+G G FG+V +A + DG + A+K + E +
Sbjct: 10 GKNNPDPTIYPVL--DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD 67
Query: 152 E-KTFAAELVAVAHL-RHRNLVRLRGWCVHEDQLLLVYDYMPNRSL------DRVLFRRP 203
+ + FA EL + L H N++ L G C H L L +Y P+ +L RVL P
Sbjct: 68 DHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDP 127
Query: 204 ENLEA---AAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLG 260
A A+ L+ +Q +A + YL ++ Q IHRD+ N+++ Y A++
Sbjct: 128 AFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIA 184
Query: 261 DFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFS 320
DFGL+R E ++ M R ++ ES SV T SDV+S
Sbjct: 185 DFGLSRGQEVYVKKTMGRLPVR-----------------WMAIESLNY-SVYTTNSDVWS 226
Query: 321 FGIVVLEVVS 330
+G+++ E+VS
Sbjct: 227 YGVLLWEIVS 236
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 106/250 (42%), Gaps = 36/250 (14%)
Query: 557 FSNELQNLARL-RHRNLVQLCGWCTEQGEMLVIYDYSA----------TRILSHLLFHNN 605
F+ EL+ L +L H N++ L G C +G + + +Y+ +R+L
Sbjct: 72 FAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAI 131
Query: 606 HRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFAL 665
S L + +A + YL ++ Q IHR++ + I + + ++ F L
Sbjct: 132 ANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGL 188
Query: 666 AEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMA 725
+R + K T G VR +M+ E + T+ +DV+S+GV++ E+V+
Sbjct: 189 ----SRGQEVYVKKTMGRLPVR----WMAIESLNYSVYTTNSDVWSYGVLLWEIVS---- 236
Query: 726 VDFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRP 785
+ G+ ++E K P ++ LN + +LMR C P RP
Sbjct: 237 LGGTPYCGMTCAELYE----KLPQGYRLEKPLNCDDEVYDLMR------QCWREKPYERP 286
Query: 786 SMRQILSILD 795
S QIL L+
Sbjct: 287 SFAQILVSLN 296
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 104/233 (44%), Gaps = 25/233 (10%)
Query: 110 SNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRH-- 167
++ F+E VLG G FG+V +A D A+K + E+ T +E++ +A L H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS-TILSEVMLLASLNHQY 63
Query: 168 -----------RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQ 216
RN V+ + L + +Y NR+L ++ ENL W
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLI--HSENLNQQRDEYW-- 119
Query: 217 RKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQM 276
++ R + AL Y+H Q IIHRD+K N+ +D N ++GDFGLA+ + L +
Sbjct: 120 --RLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSL--DI 172
Query: 277 RTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVV 329
++N T GT Y+ E K D++S GI+ E++
Sbjct: 173 LKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 16/164 (9%)
Query: 565 ARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKS 624
A L RN V+ ++ + + +Y R L L+ N Q + + +
Sbjct: 70 AWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLN-----QQRDEYWRLFRQ 124
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRN------DHGHRK 678
+ A+ Y+H ++ +IHR++ I +D N ++G F LA+ + R+ D +
Sbjct: 125 ILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 679 ATSGN-RSVRGIFGYMSPEYIE-SGEATSMADVYSFGVVVLEVV 720
+S N S G Y++ E ++ +G D+YS G++ E++
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 116/245 (47%), Gaps = 29/245 (11%)
Query: 97 NPRIFSYAELY-IGSNGFDEDEVLGSGGFGKVYRAV---LPSDGTV--VAVKCLAEKGER 150
+P Y E + N + LG+G FGKV A L + V VAVK L
Sbjct: 23 DPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA 82
Query: 151 FEK-TFAAELVAVAHL-RHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPE---N 205
EK +EL ++HL +H N+V L G C H +L++ +Y L L R+ E +
Sbjct: 83 DEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLD 142
Query: 206 LEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLA 265
E PL +A + +L + IHRDV NV+L + + A++GDFGLA
Sbjct: 143 KEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLA 199
Query: 266 RWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVV 325
R + ++ Y ++ ++ R+ + ++ PES V T +SDV+S+GI++
Sbjct: 200 RDIMNDSNYIVKGNA------------RL--PVKWMAPESIFD-CVYTVQSDVWSYGILL 244
Query: 326 LEVVS 330
E+ S
Sbjct: 245 WEIFS 249
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 112/261 (42%), Gaps = 28/261 (10%)
Query: 540 VLVKRLGMSKCPALRTRFSNELQNLARL-RHRNLVQLCGWCTEQGEMLVIYDYSATRILS 598
V VK L + + +EL+ ++ L +H N+V L G CT G +LVI +Y L
Sbjct: 71 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 130
Query: 599 HLLFHNNH----RIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDP 654
+ L + L+ + +A + +L ++ IHR++ + + L
Sbjct: 131 NFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTN 187
Query: 655 DMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGV 714
++G F LA + ND + + V+ +M+PE I T +DV+S+G+
Sbjct: 188 GHVAKIGDFGLARDIM-NDSNYIVKGNARLPVK----WMAPESIFDCVYTVQSDVWSYGI 242
Query: 715 VVLEVVTGQMAVDFRLPEGLLVK-RVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLG 773
++ E+ ++ G+LV + ++ +A+ + K + +++
Sbjct: 243 LLWEI----FSLGLNPYPGILVNSKFYKLVKDGYQMAQ-------PAFAPKNIYSIMQ-- 289
Query: 774 IACTLSNPELRPSMRQILSIL 794
AC P RP+ +QI S L
Sbjct: 290 -ACWALEPTHRPTFQQICSFL 309
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 110/247 (44%), Gaps = 47/247 (19%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRN 169
F+ LG G FG VY A ++A+K L + + E E+ +HLRH N
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL G+ ++ L+ +Y P + + L+ + + ++ I LA AL
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEVYK-------ELQKLSKFDEQRTATYITELANALS 127
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
Y H + ++IHRD+K N++L S ++ DFG W H SS R
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG---WSVHA------PSSRR------- 168
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRA--------------- 334
T + GT+ YLPPE + G + K D++S G++ E + G+
Sbjct: 169 --TTLCGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 225
Query: 335 VDLTYPD 341
V+ T+PD
Sbjct: 226 VEFTFPD 232
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 90/220 (40%), Gaps = 29/220 (13%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRL---GMSKCPALRTRFSNELQNLARL 567
A +F + + + FG Y +++L ++ + + + E++ + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDYSAT----RILSHLLFHNNHRIGHSILQWHHRYNIIK 623
RH N+++L G+ + + +I +Y+ + L L + R I
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTA----------TYIT 120
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
LA+A+ Y H +++VIHR+I + L G +A+F +S
Sbjct: 121 ELANALSYCH---SKRVIHRDIKPENLLLG-----SAGELKIADF----GWSVHAPSSRR 168
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
++ G Y+ PE IE D++S GV+ E + G+
Sbjct: 169 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 116/245 (47%), Gaps = 29/245 (11%)
Query: 97 NPRIFSYAELY-IGSNGFDEDEVLGSGGFGKVYRAV---LPSDGTV--VAVKCLAEKGER 150
+P Y E + N + LG+G FGKV A L + V VAVK L
Sbjct: 31 DPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA 90
Query: 151 FEK-TFAAELVAVAHL-RHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPE---N 205
EK +EL ++HL +H N+V L G C H +L++ +Y L L R+ E +
Sbjct: 91 DEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLD 150
Query: 206 LEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLA 265
E PL +A + +L + IHRDV NV+L + + A++GDFGLA
Sbjct: 151 KEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLA 207
Query: 266 RWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVV 325
R + ++ Y ++ ++ R+ + ++ PES V T +SDV+S+GI++
Sbjct: 208 RDIMNDSNYIVKGNA------------RL--PVKWMAPESIFD-CVYTVQSDVWSYGILL 252
Query: 326 LEVVS 330
E+ S
Sbjct: 253 WEIFS 257
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 112/261 (42%), Gaps = 28/261 (10%)
Query: 540 VLVKRLGMSKCPALRTRFSNELQNLARL-RHRNLVQLCGWCTEQGEMLVIYDYSATRILS 598
V VK L + + +EL+ ++ L +H N+V L G CT G +LVI +Y L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 599 HLLFHNNH----RIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDP 654
+ L + L+ + +A + +L ++ IHR++ + + L
Sbjct: 139 NFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTN 195
Query: 655 DMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGV 714
++G F LA + ND + + V+ +M+PE I T +DV+S+G+
Sbjct: 196 GHVAKIGDFGLARDIM-NDSNYIVKGNARLPVK----WMAPESIFDCVYTVQSDVWSYGI 250
Query: 715 VVLEVVTGQMAVDFRLPEGLLVK-RVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLG 773
++ E+ ++ G+LV + ++ +A+ + K + +++
Sbjct: 251 LLWEI----FSLGLNPYPGILVNSKFYKLVKDGYQMAQPA-------FAPKNIYSIMQ-- 297
Query: 774 IACTLSNPELRPSMRQILSIL 794
AC P RP+ +QI S L
Sbjct: 298 -ACWALEPTHRPTFQQICSFL 317
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 111/247 (44%), Gaps = 47/247 (19%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRN 169
F+ LG G FG VY A ++A+K L + + E E+ +HLRH N
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 66
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL G+ ++ L+ +Y P ++ R L+ + + ++ I LA AL
Sbjct: 67 ILRLYGYFHDATRVYLILEYAPLGTVYR-------ELQKLSKFDEQRTATYITELANALS 119
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
Y H + ++IHRD+K N++L S ++ DFG + + S+R
Sbjct: 120 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----------WSVHAPSSRR------ 160
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRA--------------- 334
T + GT+ YLPPE + G + K D++S G++ E + G+
Sbjct: 161 --TTLCGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 217
Query: 335 VDLTYPD 341
V+ T+PD
Sbjct: 218 VEFTFPD 224
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 90/220 (40%), Gaps = 29/220 (13%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRL---GMSKCPALRTRFSNELQNLARL 567
A +F + + + FG Y +++L ++ + + + E++ + L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDY----SATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
RH N+++L G+ + + +I +Y + R L L + R I
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------TYIT 112
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
LA+A+ Y H +++VIHR+I + L G +A+F +S
Sbjct: 113 ELANALSYCH---SKRVIHRDIKPENLLLG-----SAGELKIADF----GWSVHAPSSRR 160
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
++ G Y+ PE IE D++S GV+ E + G+
Sbjct: 161 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 108/231 (46%), Gaps = 27/231 (11%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
+GSG FG VY+ D V + A ++ + F E+ + RH N++ G+
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQ-AFKNEVGVLRKTRHVNILLFMGYST 74
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
QL +V + SL L E ++ I R A + YLH +
Sbjct: 75 -APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID------IARQTAQGMDYLHAK---S 124
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
IIHRD+K++N+ L ++GDFGLA +++ + +HQF ++ G+I
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLA---------TVKSRWSGSHQFE-----QLSGSI 170
Query: 299 GYLPPE--SFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
++ PE Q + + +SDV++FGIV+ E+++G+ DQII +
Sbjct: 171 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 221
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 20/210 (9%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGMS-KCPALRTRFSNELQNLARLRHRNLVQLCG 577
QR+ FGT Y+G H V VK L ++ P F NE+ L + RH N++ G
Sbjct: 14 QRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 578 WCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWN 637
+ T +V + + HL I + + +I + A + YLH +
Sbjct: 72 YSTAPQLAIVTQWCEGSSLYHHL------HIIETKFEMIKLIDIARQTAQGMDYLHAK-- 123
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
+IHR++ S+ I L D+ ++G F LA +R H+ + G +M+PE
Sbjct: 124 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ-----FEQLSGSILWMAPEV 177
Query: 698 I---ESGEATSMADVYSFGVVVLEVVTGQM 724
I + + +DVY+FG+V+ E++TGQ+
Sbjct: 178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQL 207
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 108/235 (45%), Gaps = 35/235 (14%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
+GSG FG VY+ D V + A ++ + F E+ + RH N++ G+
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQ-AFKNEVGVLRKTRHVNILLFMGYST 74
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
+ QL +V + SL L E ++ I R A + YLH +
Sbjct: 75 -KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID------IARQTAQGMDYLHAK---S 124
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLA----RWLEHELQYQMRTSSARNHQFHLAETTRI 294
IIHRD+K++N+ L ++GDFGLA RW + +HQF ++
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRW-------------SGSHQFE-----QL 166
Query: 295 GGTIGYLPPE--SFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
G+I ++ PE Q + + +SDV++FGIV+ E+++G+ DQII +
Sbjct: 167 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 221
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 20/210 (9%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGMS-KCPALRTRFSNELQNLARLRHRNLVQLCG 577
QR+ FGT Y+G H V VK L ++ P F NE+ L + RH N++ G
Sbjct: 14 QRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 578 WCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWN 637
+ T+ +V + + HL I + + +I + A + YLH +
Sbjct: 72 YSTKPQLAIVTQWCEGSSLYHHL------HIIETKFEMIKLIDIARQTAQGMDYLHAK-- 123
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
+IHR++ S+ I L D+ ++G F LA +R H+ + G +M+PE
Sbjct: 124 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQ-----FEQLSGSILWMAPEV 177
Query: 698 I---ESGEATSMADVYSFGVVVLEVVTGQM 724
I + + +DVY+FG+V+ E++TGQ+
Sbjct: 178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQL 207
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 108/235 (45%), Gaps = 35/235 (14%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
+GSG FG VY+ D V + A ++ + F E+ + RH N++ G+
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQ-AFKNEVGVLRKTRHVNILLFMGYST 94
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
+ QL +V + SL L E ++ I R A + YLH +
Sbjct: 95 -KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID------IARQTAQGMDYLHAK---S 144
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLA----RWLEHELQYQMRTSSARNHQFHLAETTRI 294
IIHRD+K++N+ L ++GDFGLA RW + +HQF ++
Sbjct: 145 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRW-------------SGSHQFE-----QL 186
Query: 295 GGTIGYLPPE--SFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
G+I ++ PE Q + + +SDV++FGIV+ E+++G+ DQII +
Sbjct: 187 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 241
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 20/210 (9%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGMS-KCPALRTRFSNELQNLARLRHRNLVQLCG 577
QR+ FGT Y+G H V VK L ++ P F NE+ L + RH N++ G
Sbjct: 34 QRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 91
Query: 578 WCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWN 637
+ T+ +V + + HL I + + +I + A + YLH +
Sbjct: 92 YSTKPQLAIVTQWCEGSSLYHHL------HIIETKFEMIKLIDIARQTAQGMDYLHAK-- 143
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
+IHR++ S+ I L D+ ++G F LA +R H+ + G +M+PE
Sbjct: 144 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQ-----FEQLSGSILWMAPEV 197
Query: 698 I---ESGEATSMADVYSFGVVVLEVVTGQM 724
I + + +DVY+FG+V+ E++TGQ+
Sbjct: 198 IRMQDKNPYSFQSDVYAFGIVLYELMTGQL 227
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 32/229 (13%)
Query: 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRH 167
+ FD LG G FG VY A + ++A+K L + + E E E+ +HLRH
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
N++R+ + ++ L+ ++ P L + L+ + ++ + LA A
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYK-------ELQKHGRFDEQRSATFMEELADA 127
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
LHY HE+ ++IHRD+K N+++ + ++ DFG W H + R
Sbjct: 128 LHYCHER---KVIHRDIKPENLLMGYKGELKIADFG---WSVHAPSLRRRX--------- 172
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
+ GT+ YLPPE + G K D++ G++ E + G D
Sbjct: 173 ------MCGTLDYLPPEMIE-GKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 95/226 (42%), Gaps = 33/226 (14%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVL-VKRLGMSKCP--ALRTRFSNELQNLARL 567
++F + + + FG Y +++++ +K L S+ + + E++ + L
Sbjct: 13 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL 72
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYN------I 621
RH N++++ + ++ + ++ +++ L + LQ H R++
Sbjct: 73 RHPNILRMYNYFHDRKRIYLMLEFAPRGEL------------YKELQKHGRFDEQRSATF 120
Query: 622 IKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATS 681
++ LA A+ Y HE +VIHR+I + + G +A+F + H +
Sbjct: 121 MEELADALHYCHER---KVIHRDIKPENLLMG-----YKGELKIADF-GWSVHA---PSL 168
Query: 682 GNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVD 727
R + G Y+ PE IE D++ GV+ E + G D
Sbjct: 169 RRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 32/229 (13%)
Query: 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRH 167
+ FD LG G FG VY A + ++A+K L + + E E E+ +HLRH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
N++R+ + ++ L+ ++ P L + L+ + ++ + LA A
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYK-------ELQKHGRFDEQRSATFMEELADA 126
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
LHY HE+ ++IHRD+K N+++ + ++ DFG W H + R
Sbjct: 127 LHYCHER---KVIHRDIKPENLLMGYKGELKIADFG---WSVHAPSLRRRX--------- 171
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
+ GT+ YLPPE + G K D++ G++ E + G D
Sbjct: 172 ------MCGTLDYLPPEMIE-GKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 95/226 (42%), Gaps = 33/226 (14%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVL-VKRLGMSKCP--ALRTRFSNELQNLARL 567
++F + + + FG Y +++++ +K L S+ + + E++ + L
Sbjct: 12 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL 71
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYN------I 621
RH N++++ + ++ + ++ +++ L + LQ H R++
Sbjct: 72 RHPNILRMYNYFHDRKRIYLMLEFAPRGEL------------YKELQKHGRFDEQRSATF 119
Query: 622 IKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATS 681
++ LA A+ Y HE +VIHR+I + + G +A+F + H +
Sbjct: 120 MEELADALHYCHER---KVIHRDIKPENLLMG-----YKGELKIADF-GWSVHA---PSL 167
Query: 682 GNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVD 727
R + G Y+ PE IE D++ GV+ E + G D
Sbjct: 168 RRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 109/231 (47%), Gaps = 27/231 (11%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
+GSG FG VY+ D V +K + E+F+ F E+ + RH N++ G+
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQ-AFRNEVAVLRKTRHVNILLFMGYMT 102
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
+D L +V + SL + L + + ++ I R A + YLH +
Sbjct: 103 -KDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLID------IARQTAQGMDYLHAK---N 152
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
IIHRD+K++N+ L ++GDFGLA + R S ++ + + G++
Sbjct: 153 IIHRDMKSNNIFLHEGLTVKIGDFGLA-------TVKSRWSGSQ-------QVEQPTGSV 198
Query: 299 GYLPPE--SFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
++ PE Q + + +SDV+S+GIV+ E+++G DQII +
Sbjct: 199 LWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFM 249
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 124/285 (43%), Gaps = 36/285 (12%)
Query: 518 SQRVAEMDFGTAYQGFLDNHQYVLVKRLGM-SKCPALRTRFSNELQNLARLRHRNLVQLC 576
S R+ FGT Y+G H V VK L + P F NE+ L + RH N++
Sbjct: 41 STRIGSGSFGTVYKG--KWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFM 98
Query: 577 GWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEW 636
G+ T+ +V + + HL + + Q +I + A + YLH +
Sbjct: 99 GYMTKDNLAIVTQWCEGSSLYKHL------HVQETKFQMFQLIDIARQTAQGMDYLHAK- 151
Query: 637 NEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFG---YM 693
+IHR++ S+ I L + ++G F LA +R SG++ V G +M
Sbjct: 152 --NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR--------WSGSQQVEQPTGSVLWM 201
Query: 694 SPEYI---ESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLA 750
+PE I ++ + +DVYS+G+V+ E++TG+ LP + R R A
Sbjct: 202 APEVIRMQDNNPFSFQSDVYSYGIVLYELMTGE------LPYSHINNRDQIIFMVGRGYA 255
Query: 751 ELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
DLS + K + RL+ C E RP QILS ++
Sbjct: 256 S-PDLSKLYKNCPKAMKRLVA---DCVKKVKEERPLFPQILSSIE 296
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 108/235 (45%), Gaps = 35/235 (14%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
+GSG FG VY+ D V + A ++ + F E+ + RH N++ G+
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQ-AFKNEVGVLRKTRHVNILLFMGYST 102
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
+ QL +V + SL L E ++ I R A + YLH +
Sbjct: 103 -KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID------IARQTAQGMDYLHAK---S 152
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLA----RWLEHELQYQMRTSSARNHQFHLAETTRI 294
IIHRD+K++N+ L ++GDFGLA RW + +HQF ++
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRW-------------SGSHQFE-----QL 194
Query: 295 GGTIGYLPPE--SFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
G+I ++ PE Q + + +SDV++FGIV+ E+++G+ DQII +
Sbjct: 195 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 249
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 20/210 (9%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGMS-KCPALRTRFSNELQNLARLRHRNLVQLCG 577
QR+ FGT Y+G H V VK L ++ P F NE+ L + RH N++ G
Sbjct: 42 QRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 578 WCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWN 637
+ T+ +V + + HL I + + +I + A + YLH +
Sbjct: 100 YSTKPQLAIVTQWCEGSSLYHHL------HIIETKFEMIKLIDIARQTAQGMDYLHAK-- 151
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
+IHR++ S+ I L D+ ++G F LA +R H+ + G +M+PE
Sbjct: 152 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQ-----FEQLSGSILWMAPEV 205
Query: 698 I---ESGEATSMADVYSFGVVVLEVVTGQM 724
I + + +DVY+FG+V+ E++TGQ+
Sbjct: 206 IRMQDKNPYSFQSDVYAFGIVLYELMTGQL 235
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 109/233 (46%), Gaps = 33/233 (14%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRN 169
F+ LG G FG VY A + ++A+K L + + E E+ +HLRH N
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL G+ ++ L+ +Y P ++ R L+ + + ++ I LA AL
Sbjct: 70 ILRLYGYFHDSTRVYLILEYAPLGTVYR-------ELQKLSKFDEQRTATYITELANALS 122
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
Y H + ++IHRD+K N++L S ++ DFG W H SS R
Sbjct: 123 YCHSK---KVIHRDIKPENLLLGSAGELKIADFG---WSVHA------PSSRR------- 163
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDL-TYPD 341
+ GT+ YLPPE + G + K D++S G++ E + G+ + TY D
Sbjct: 164 --AALCGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQD 213
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 91/220 (41%), Gaps = 29/220 (13%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRL---GMSKCPALRTRFSNELQNLARL 567
A +F + + + FG Y N +++L ++ + + + E++ + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDY----SATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
RH N+++L G+ + + +I +Y + R L L + R I
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------TYIT 115
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
LA+A+ Y H +++VIHR+I + L G +A+F +S
Sbjct: 116 ELANALSYCH---SKKVIHRDIKPENLLLG-----SAGELKIADF----GWSVHAPSSRR 163
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
++ G Y+ PE IE D++S GV+ E + G+
Sbjct: 164 AALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 112/247 (45%), Gaps = 47/247 (19%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRN 169
FD LG G FG VY A ++A+K L + + E E+ +HLRH N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL G+ ++ L+ +Y P ++ R L+ + + ++ I LA AL
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYR-------ELQKLSRFDEQRTATYITELANALS 126
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
Y H + ++IHRD+K N++L S ++ DFG W H SS R+
Sbjct: 127 YCHSK---RVIHRDIKPENLLLGSNGELKIADFG---WSVHA------PSSRRD------ 168
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG-------------RRA-- 334
+ GT+ YLPPE + G + K D++S G++ E + G RR
Sbjct: 169 ---TLCGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISR 224
Query: 335 VDLTYPD 341
V+ T+PD
Sbjct: 225 VEFTFPD 231
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 88/216 (40%), Gaps = 29/216 (13%)
Query: 514 NFSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMS---KCPALRTRFSNELQNLARLRHR 570
+F + + + FG Y +++L ++ + + + E++ + LRH
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 571 NLVQLCGWCTEQGEMLVIYDY----SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLA 626
N+++L G+ + + +I +Y + R L L + R I LA
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTA----------TYITELA 122
Query: 627 SAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSV 686
+A+ Y H +++VIHR+I + L + ++ F + +S ++
Sbjct: 123 NALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSV---------HAPSSRRDTL 170
Query: 687 RGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
G Y+ PE IE D++S GV+ E + G
Sbjct: 171 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 29/218 (13%)
Query: 119 LGSGGFGKV----YRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLR 174
LG G FG V Y + + G VVAVK L E + F E+ + L+H N+V+ +
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 175 GWCVHEDQ--LLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
G C + L L+ +Y+P SL L + E ++ L + + + + YL
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYLG 132
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETT 292
+ + IHR++ T N++++++ ++GDFGL + L + +Y + F A
Sbjct: 133 TK---RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYA--- 186
Query: 293 RIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PES + + A SDV+SFG+V+ E+ +
Sbjct: 187 ----------PESLTESKFSVA-SDVWSFGVVLYELFT 213
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 22/211 (10%)
Query: 519 QRVAEMDFGTA----YQGFLDNH-QYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLV 573
Q++ + +FG+ Y DN + V VK+L S LR F E++ L L+H N+V
Sbjct: 17 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIV 75
Query: 574 QLCGWCTEQG--EMLVIYDYSATRILSHLLFHNNHRIGH-SILQWHHRYNIIKSLASAIL 630
+ G C G + +I +Y L L + RI H +LQ+ + +
Sbjct: 76 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY------TSQICKGME 129
Query: 631 YLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIF 690
YL ++ IHRN+ + I ++ + ++G F L + L ++ ++ G IF
Sbjct: 130 YLG---TKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESP---IF 183
Query: 691 GYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
Y +PE + + + +DV+SFGVV+ E+ T
Sbjct: 184 WY-APESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 109/235 (46%), Gaps = 39/235 (16%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
+GSG FG VY+ D V + A ++ + F E+ + RH N++ G+
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQ-AFKNEVGVLRKTRHVNILLFMGYST 90
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRK--KIIRGLAAALHYLHEQLE 236
QL +V + SL L A+ +E +K I R A + YLH +
Sbjct: 91 -APQLAIVTQWCEGSSLYHHLH--------ASETKFEMKKLIDIARQTARGMDYLHAK-- 139
Query: 237 TQIIHRDVKTSNVMLDSQYNARLGDFGLA----RWLEHELQYQMRTSSARNHQFHLAETT 292
IIHRD+K++N+ L ++GDFGLA RW + +HQF
Sbjct: 140 -SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW-------------SGSHQFE----- 180
Query: 293 RIGGTIGYLPPE--SFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII 345
++ G+I ++ PE Q + + +SDV++FGIV+ E+++G+ DQII
Sbjct: 181 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII 235
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGMSK-CPALRTRFSNELQNLARLRHRNLVQLCG 577
QR+ FGT Y+G H V VK L ++ P F NE+ L + RH N++ G
Sbjct: 30 QRIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 578 WCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWN 637
+ T ++ ++ + L H L + + L +I + A + YLH +
Sbjct: 88 YSTAP-QLAIVTQWCEGSSLYHHLHASETKFEMKKL-----IDIARQTARGMDYLHAK-- 139
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
+IHR++ S+ I L D ++G F LA +R H+ + G +M+PE
Sbjct: 140 -SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ-----FEQLSGSILWMAPEV 193
Query: 698 I---ESGEATSMADVYSFGVVVLEVVTGQM 724
I +S + +DVY+FG+V+ E++TGQ+
Sbjct: 194 IRMQDSNPYSFQSDVYAFGIVLYELMTGQL 223
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 106/222 (47%), Gaps = 33/222 (14%)
Query: 116 DEVLGSGGFGKVYRAVLPSDGT---VVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
+ V+G+G FG+V L G VA+K L E+ + F E + H N++
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
L G +++V +YM N SLD L + Q ++RG++A + YL
Sbjct: 87 HLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVI------QLVGMLRGISAGMKYL 140
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
+ +HRD+ N++++S ++ DFGL+R LE + + A T
Sbjct: 141 SDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE--------------AAYT 183
Query: 292 TRIGGT-IGYLPPE--SFQKGSVATAKSDVFSFGIVVLEVVS 330
TR G I + PE +F+K T+ SDV+S+GIV+ EVVS
Sbjct: 184 TRGGKIPIRWTAPEAIAFRK---FTSASDVWSYGIVMWEVVS 222
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 86/182 (47%), Gaps = 12/182 (6%)
Query: 540 VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSH 599
V +K L + R F E + + H N++ L G T+ ++++ +Y L
Sbjct: 53 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDT 112
Query: 600 LLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPR 659
L N+ + +++Q +++ +++ + YL + +HR++ + I ++ ++ +
Sbjct: 113 FLKKNDGQF--TVIQL---VGMLRGISAGMKYLS---DMGYVHRDLAARNILINSNLVCK 164
Query: 660 LGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEV 719
+ F L+ L + G +R + +PE I + TS +DV+S+G+V+ EV
Sbjct: 165 VSDFGLSRVLEDDPEAAYTTRGGKIPIR----WTAPEAIAFRKFTSASDVWSYGIVMWEV 220
Query: 720 VT 721
V+
Sbjct: 221 VS 222
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 111/247 (44%), Gaps = 47/247 (19%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRN 169
F+ LG G FG VY A ++A+K L + + E E+ +HLRH N
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL G+ ++ L+ +Y P ++ R L+ + + ++ I LA AL
Sbjct: 96 ILRLYGYFHDATRVYLILEYAPLGTVYR-------ELQKLSKFDEQRTATYITELANALS 148
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
Y H + ++IHRD+K N++L S ++ DFG W H SS R+
Sbjct: 149 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG---WSVHA------PSSRRDD----- 191
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRA--------------- 334
+ GT+ YLPPE + G + K D++S G++ E + G+
Sbjct: 192 ----LCGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 246
Query: 335 VDLTYPD 341
V+ T+PD
Sbjct: 247 VEFTFPD 253
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 89/220 (40%), Gaps = 29/220 (13%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRL---GMSKCPALRTRFSNELQNLARL 567
A +F + + + FG Y +++L ++ + + + E++ + L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDYSAT----RILSHLLFHNNHRIGHSILQWHHRYNIIK 623
RH N+++L G+ + + +I +Y+ R L L + R I
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------TYIT 141
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
LA+A+ Y H +++VIHR+I + L G +A+F +S
Sbjct: 142 ELANALSYCH---SKRVIHRDIKPENLLLG-----SAGELKIADF----GWSVHAPSSRR 189
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
+ G Y+ PE IE D++S GV+ E + G+
Sbjct: 190 DDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 111/247 (44%), Gaps = 47/247 (19%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRN 169
F+ LG G FG VY A ++A+K L + + E E+ +HLRH N
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL G+ ++ L+ +Y P ++ R L+ + + ++ I LA AL
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYR-------ELQKLSKFDEQRTATYITELANALS 123
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
Y H + ++IHRD+K N++L S ++ DFG W H SS R+
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG---WSVHA------PSSRRD------ 165
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRA--------------- 334
+ GT+ YLPPE + G + K D++S G++ E + G+
Sbjct: 166 ---TLCGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 221
Query: 335 VDLTYPD 341
V+ T+PD
Sbjct: 222 VEFTFPD 228
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 90/220 (40%), Gaps = 29/220 (13%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRL---GMSKCPALRTRFSNELQNLARL 567
A +F + + + FG Y +++L ++ + + + E++ + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDY----SATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
RH N+++L G+ + + +I +Y + R L L + R I
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------TYIT 116
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
LA+A+ Y H +++VIHR+I + L G +A+F +S
Sbjct: 117 ELANALSYCH---SKRVIHRDIKPENLLLG-----SAGELKIADF----GWSVHAPSSRR 164
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
++ G Y+ PE IE D++S GV+ E + G+
Sbjct: 165 DTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 125/257 (48%), Gaps = 42/257 (16%)
Query: 108 IGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL--------AEKGERFEKTFAAEL 159
+ N + ++ +G GGFG V++ L D +VVA+K L E E+F++ F E+
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQE-FQREV 74
Query: 160 VAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKK 219
+++L H N+V+L G + + +V +++P L L L+ A P+ W + +
Sbjct: 75 FIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRL------LDKAHPIKWSVKLR 126
Query: 220 IIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDS-----QYNARLGDFGLARWLEHELQY 274
++ +A + Y+ Q I+HRD+++ N+ L S A++ DFGL++ H +
Sbjct: 127 LMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSV-- 183
Query: 275 QMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRA 334
+ N Q+ ET IG ES+ T K+D +SF +++ +++G
Sbjct: 184 ---SGLLGNFQWMAPET--IGAE-----EESY------TEKADTYSFAMILYTILTGEGP 227
Query: 335 VDLTYPDDQIILLDWIR 351
D Y +I ++ IR
Sbjct: 228 FD-EYSYGKIKFINMIR 243
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 102/227 (44%), Gaps = 24/227 (10%)
Query: 511 ATNNFSESQRVAEMDFGTAYQG-FLDNHQYVLVKRL------GMSKCPALRTRFSNELQN 563
A N +++ + FG ++G + + V +K L G ++ F E+
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 564 LARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
++ L H N+V+L G M++ ++ L H L H I +W + ++
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRLLDKAHPI-----KWSVKLRLML 129
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDP-DMNPRLGSFALAEFLTRNDHGHRKATSG 682
+A I Y+ + N ++HR++ S I L D N + + +A+F H + SG
Sbjct: 130 DIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCA-KVADFGLSQQSVH--SVSG 185
Query: 683 NRSVRGIFGYMSPEYIESGEA--TSMADVYSFGVVVLEVVTGQMAVD 727
+ G F +M+PE I + E T AD YSF +++ ++TG+ D
Sbjct: 186 ---LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 111/247 (44%), Gaps = 47/247 (19%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRN 169
F+ LG G FG VY A ++A+K L + + E E+ +HLRH N
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL G+ ++ L+ +Y P ++ R L+ + + ++ I LA AL
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTVYR-------ELQKLSKFDEQRTATYITELANALS 124
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
Y H + ++IHRD+K N++L S ++ +FG W H SS R
Sbjct: 125 YCHSK---RVIHRDIKPENLLLGSAGELKIANFG---WSVHA------PSSRR------- 165
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRA--------------- 334
T + GT+ YLPPE + G + K D++S G++ E + G+
Sbjct: 166 --TTLCGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 222
Query: 335 VDLTYPD 341
V+ T+PD
Sbjct: 223 VEFTFPD 229
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 90/220 (40%), Gaps = 29/220 (13%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRL---GMSKCPALRTRFSNELQNLARL 567
A +F + + + FG Y +++L ++ + + + E++ + L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDY----SATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
RH N+++L G+ + + +I +Y + R L L + R I
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------TYIT 117
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
LA+A+ Y H +++VIHR+I + L ++ +F + +S
Sbjct: 118 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSV---------HAPSSRR 165
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
++ G Y+ PE IE D++S GV+ E + G+
Sbjct: 166 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 110/233 (47%), Gaps = 34/233 (14%)
Query: 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVV--AVKCLAEKGERFE-KTFAAELVAVAHL-R 166
N +V+G G FG+V +A + DG + A+K + E + + + FA EL + L
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 167 HRNLVRLRGWCVHEDQLLLVYDYMPNRSL------DRVLFRRPENLEA---AAPLNWEQR 217
H N++ L G C H L L +Y P+ +L RVL P A A+ L+ +Q
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 218 KKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMR 277
+A + YL ++ Q IHRD+ N+++ Y A++ DFGL+R E ++ M
Sbjct: 135 LHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 191
Query: 278 TSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
R ++ ES SV T SDV+S+G+++ E+VS
Sbjct: 192 RLPVR-----------------WMAIESLNY-SVYTTNSDVWSYGVLLWEIVS 226
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 106/252 (42%), Gaps = 40/252 (15%)
Query: 557 FSNELQNLARL-RHRNLVQLCGWCTEQGEMLVIYDYSA----------TRILSHLLFHNN 605
F+ EL+ L +L H N++ L G C +G + + +Y+ +R+L
Sbjct: 62 FAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAI 121
Query: 606 HRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFAL 665
S L + +A + YL ++ Q IHR++ + I + + ++ F L
Sbjct: 122 ANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGL 178
Query: 666 AEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT--GQ 723
+R + K T G VR +M+ E + T+ +DV+S+GV++ E+V+ G
Sbjct: 179 ----SRGQEVYVKKTMGRLPVR----WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT 230
Query: 724 MAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPEL 783
G+ ++E K P ++ LN + +LMR C P
Sbjct: 231 PYC------GMTCAELYE----KLPQGYRLEKPLNCDDEVYDLMR------QCWREKPYE 274
Query: 784 RPSMRQILSILD 795
RPS QIL L+
Sbjct: 275 RPSFAQILVSLN 286
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 111/247 (44%), Gaps = 47/247 (19%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRN 169
F+ LG G FG VY A ++A+K L + + E E+ +HLRH N
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL G+ ++ L+ +Y P ++ R L+ + + ++ I LA AL
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYR-------ELQKLSKFDEQRTATYITELANALS 125
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
Y H + ++IHRD+K N++L S ++ DFG W H SS R+
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG---WSVHA------PSSRRDD----- 168
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRA--------------- 334
+ GT+ YLPPE + G + K D++S G++ E + G+
Sbjct: 169 ----LCGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 223
Query: 335 VDLTYPD 341
V+ T+PD
Sbjct: 224 VEFTFPD 230
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 89/220 (40%), Gaps = 29/220 (13%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRL---GMSKCPALRTRFSNELQNLARL 567
A +F + + + FG Y +++L ++ + + + E++ + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDY----SATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
RH N+++L G+ + + +I +Y + R L L + R I
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------TYIT 118
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
LA+A+ Y H +++VIHR+I + L G +A+F +S
Sbjct: 119 ELANALSYCH---SKRVIHRDIKPENLLLG-----SAGELKIADF----GWSVHAPSSRR 166
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
+ G Y+ PE IE D++S GV+ E + G+
Sbjct: 167 DDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 111/247 (44%), Gaps = 47/247 (19%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRN 169
F+ LG G FG VY A ++A+K L + + E E+ +HLRH N
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL G+ ++ L+ +Y P ++ R L+ + + ++ I LA AL
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYR-------ELQKLSKFDEQRTATYITELANALS 125
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
Y H + ++IHRD+K N++L S ++ +FG W H SS R
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIANFG---WSVHA------PSSRR------- 166
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRA--------------- 334
T + GT+ YLPPE + G + K D++S G++ E + G+
Sbjct: 167 --TTLCGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 223
Query: 335 VDLTYPD 341
V+ T+PD
Sbjct: 224 VEFTFPD 230
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 90/220 (40%), Gaps = 29/220 (13%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRL---GMSKCPALRTRFSNELQNLARL 567
A +F + + + FG Y +++L ++ + + + E++ + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDY----SATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
RH N+++L G+ + + +I +Y + R L L + R I
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------TYIT 118
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
LA+A+ Y H +++VIHR+I + L ++ +F + +S
Sbjct: 119 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSV---------HAPSSRR 166
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
++ G Y+ PE IE D++S GV+ E + G+
Sbjct: 167 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 110/247 (44%), Gaps = 47/247 (19%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRN 169
F+ LG G FG VY A ++A+K L + + E E+ +HLRH N
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL G+ ++ L+ +Y P ++ R L+ + + ++ I LA AL
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTVYR-------ELQKLSKFDEQRTATYITELANALS 124
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
Y H + ++IHRD+K N++L S ++ DFG W H SS R
Sbjct: 125 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG---WSVHA------PSSRR------- 165
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRA--------------- 334
+ GT+ YLPPE + G + K D++S G++ E + G+
Sbjct: 166 --XXLCGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 222
Query: 335 VDLTYPD 341
V+ T+PD
Sbjct: 223 VEFTFPD 229
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 89/220 (40%), Gaps = 29/220 (13%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRL---GMSKCPALRTRFSNELQNLARL 567
A +F + + + FG Y +++L ++ + + + E++ + L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDY----SATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
RH N+++L G+ + + +I +Y + R L L + R I
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------TYIT 117
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
LA+A+ Y H +++VIHR+I + L G +A+F +S
Sbjct: 118 ELANALSYCH---SKRVIHRDIKPENLLLG-----SAGELKIADF----GWSVHAPSSRR 165
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
+ G Y+ PE IE D++S GV+ E + G+
Sbjct: 166 XXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 32/229 (13%)
Query: 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRH 167
+ FD LG G FG VY A + ++A+K L + + E E E+ +HLRH
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
N++R+ + ++ L+ ++ P L + L+ + ++ + LA A
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYK-------ELQKHGRFDEQRSATFMEELADA 126
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
LHY HE+ ++IHRD+K N+++ + ++ DFG W H + R
Sbjct: 127 LHYCHER---KVIHRDIKPENLLMGYKGELKIADFG---WSVHAPSLRRRX--------- 171
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
+ GT+ YLPPE + G K D++ G++ E + G D
Sbjct: 172 ------MCGTLDYLPPEMIE-GKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 95/226 (42%), Gaps = 33/226 (14%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVL-VKRLGMSKCP--ALRTRFSNELQNLARL 567
++F + + + FG Y +++++ +K L S+ + + E++ + L
Sbjct: 12 TIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL 71
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYN------I 621
RH N++++ + ++ + ++ +++ L + LQ H R++
Sbjct: 72 RHPNILRMYNYFHDRKRIYLMLEFAPRGEL------------YKELQKHGRFDEQRSATF 119
Query: 622 IKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATS 681
++ LA A+ Y HE +VIHR+I + + G +A+F + H +
Sbjct: 120 MEELADALHYCHER---KVIHRDIKPENLLMG-----YKGELKIADF-GWSVHA---PSL 167
Query: 682 GNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVD 727
R + G Y+ PE IE D++ GV+ E + G D
Sbjct: 168 RRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 29/217 (13%)
Query: 117 EVLGS-GGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRG 175
E++G G FGKVY+A + A K + K E + + E+ +A H N+V+L
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 74
Query: 176 WCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQL 235
+E+ L ++ ++ ++D V+ LE PL Q + + + AL+YLH+
Sbjct: 75 AFYYENNLWILIEFCAGGAVDAVM------LELERPLTESQIQVVCKQTLDALNYLHDN- 127
Query: 236 ETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIG 295
+IIHRD+K N++ + +L DFG+ SA+N + +
Sbjct: 128 --KIIHRDLKAGNILFTLDGDIKLADFGV---------------SAKNTRTXIQRRDSFI 170
Query: 296 GTIGYLPPESF----QKGSVATAKSDVFSFGIVVLEV 328
GT ++ PE K K+DV+S GI ++E+
Sbjct: 171 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 110/247 (44%), Gaps = 47/247 (19%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRN 169
F+ LG G FG VY A ++A+K L + + E E+ +HLRH N
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL G+ ++ L+ +Y P ++ R L+ + + ++ I LA AL
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYR-------ELQKLSKFDEQRTATYITELANALS 125
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
Y H + ++IHRD+K N++L S ++ DFG W H SS R
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG---WSVHA------PSSRR------- 166
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRA--------------- 334
+ GT+ YLPPE + G + K D++S G++ E + G+
Sbjct: 167 --XXLCGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 223
Query: 335 VDLTYPD 341
V+ T+PD
Sbjct: 224 VEFTFPD 230
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 89/220 (40%), Gaps = 29/220 (13%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRL---GMSKCPALRTRFSNELQNLARL 567
A +F + + + FG Y +++L ++ + + + E++ + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDY----SATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
RH N+++L G+ + + +I +Y + R L L + R I
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------TYIT 118
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
LA+A+ Y H +++VIHR+I + L G +A+F +S
Sbjct: 119 ELANALSYCH---SKRVIHRDIKPENLLLG-----SAGELKIADF----GWSVHAPSSRR 166
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
+ G Y+ PE IE D++S GV+ E + G+
Sbjct: 167 XXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 29/218 (13%)
Query: 119 LGSGGFGKV----YRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLR 174
LG G FG V Y + + G VVAVK L E + F E+ + L+H N+V+ +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 175 GWCVHEDQ--LLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
G C + L L+ +Y+P SL L + E ++ L + + + + YL
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYLG 134
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETT 292
+ + IHRD+ T N++++++ ++GDFGL + L + + + F A
Sbjct: 135 TK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA--- 188
Query: 293 RIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PES + + A SDV+SFG+V+ E+ +
Sbjct: 189 ----------PESLTESKFSVA-SDVWSFGVVLYELFT 215
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 519 QRVAEMDFGTA----YQGFLDNH-QYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLV 573
Q++ + +FG+ Y DN + V VK+L S LR F E++ L L+H N+V
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIV 77
Query: 574 QLCGWCTEQG--EMLVIYDYSATRILSHLLFHNNHRIGH-SILQWHHRYNIIKSLASAIL 630
+ G C G + +I +Y L L + RI H +LQ+ + +
Sbjct: 78 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY------TSQICKGME 131
Query: 631 YLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIF 690
YL ++ IHR++ + I ++ + ++G F L + L ++ + G IF
Sbjct: 132 YLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP---IF 185
Query: 691 GYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
Y +PE + + + +DV+SFGVV+ E+ T
Sbjct: 186 WY-APESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 29/218 (13%)
Query: 119 LGSGGFGKV----YRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLR 174
LG G FG V Y + + G VVAVK L E + F E+ + L+H N+V+ +
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 175 GWCVHEDQ--LLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
G C + L L+ +Y+P SL L + E ++ L + + + + YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYLG 131
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETT 292
+ + IHRD+ T N++++++ ++GDFGL + L + + + F A
Sbjct: 132 TK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA--- 185
Query: 293 RIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PES + + A SDV+SFG+V+ E+ +
Sbjct: 186 ----------PESLTESKFSVA-SDVWSFGVVLYELFT 212
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 519 QRVAEMDFGTA----YQGFLDNH-QYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLV 573
Q++ + +FG+ Y DN + V VK+L S LR F E++ L L+H N+V
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIV 74
Query: 574 QLCGWCTEQG--EMLVIYDYSATRILSHLLFHNNHRIGH-SILQWHHRYNIIKSLASAIL 630
+ G C G + +I +Y L L + RI H +LQ+ + +
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY------TSQICKGME 128
Query: 631 YLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIF 690
YL ++ IHR++ + I ++ + ++G F L + L ++ + G IF
Sbjct: 129 YLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP---IF 182
Query: 691 GYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
Y +PE + + + +DV+SFGVV+ E+ T
Sbjct: 183 WY-APESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 110/247 (44%), Gaps = 47/247 (19%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRN 169
F+ LG G FG VY A ++A+K L + + E E+ +HLRH N
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL G+ ++ L+ +Y P ++ R L+ + + ++ I LA AL
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYR-------ELQKLSKFDEQRTATYITELANALS 125
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
Y H + ++IHRD+K N++L S ++ DFG W H SS R
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG---WSVHA------PSSRR------- 166
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRA--------------- 334
+ GT+ YLPPE + G + K D++S G++ E + G+
Sbjct: 167 --AALCGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 223
Query: 335 VDLTYPD 341
V+ T+PD
Sbjct: 224 VEFTFPD 230
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 90/220 (40%), Gaps = 29/220 (13%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRL---GMSKCPALRTRFSNELQNLARL 567
A +F + + + FG Y +++L ++ + + + E++ + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDY----SATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
RH N+++L G+ + + +I +Y + R L L + R I
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------TYIT 118
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
LA+A+ Y H +++VIHR+I + L G +A+F +S
Sbjct: 119 ELANALSYCH---SKRVIHRDIKPENLLLG-----SAGELKIADF----GWSVHAPSSRR 166
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
++ G Y+ PE IE D++S GV+ E + G+
Sbjct: 167 AALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 29/218 (13%)
Query: 119 LGSGGFGKV----YRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLR 174
LG G FG V Y + + G VVAVK L E + F E+ + L+H N+V+ +
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 175 GWCVHEDQ--LLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
G C + L L+ +Y+P SL L + E ++ L + + + + YL
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYLG 136
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETT 292
+ + IHRD+ T N++++++ ++GDFGL + L + + + F A
Sbjct: 137 TK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA--- 190
Query: 293 RIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PES + + A SDV+SFG+V+ E+ +
Sbjct: 191 ----------PESLTESKFSVA-SDVWSFGVVLYELFT 217
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 519 QRVAEMDFGTA----YQGFLDNH-QYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLV 573
Q++ + +FG+ Y DN + V VK+L S LR F E++ L L+H N+V
Sbjct: 21 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIV 79
Query: 574 QLCGWCTEQG--EMLVIYDYSATRILSHLLFHNNHRIGH-SILQWHHRYNIIKSLASAIL 630
+ G C G + +I +Y L L + RI H +LQ+ + +
Sbjct: 80 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY------TSQICKGME 133
Query: 631 YLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIF 690
YL ++ IHR++ + I ++ + ++G F L + L ++ + G IF
Sbjct: 134 YLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP---IF 187
Query: 691 GYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
Y +PE + + + +DV+SFGVV+ E+ T
Sbjct: 188 WY-APESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 29/218 (13%)
Query: 119 LGSGGFGKV----YRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLR 174
LG G FG V Y + + G VVAVK L E + F E+ + L+H N+V+ +
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 175 GWCVHEDQ--LLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
G C + L L+ +Y+P SL L + E ++ L + + + + YL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYLG 149
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETT 292
+ + IHRD+ T N++++++ ++GDFGL + L + + + F A
Sbjct: 150 TK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA--- 203
Query: 293 RIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PES + + A SDV+SFG+V+ E+ +
Sbjct: 204 ----------PESLTESKFSVA-SDVWSFGVVLYELFT 230
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 519 QRVAEMDFGTA----YQGFLDNH-QYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLV 573
Q++ + +FG+ Y DN + V VK+L S LR F E++ L L+H N+V
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIV 92
Query: 574 QLCGWCTEQG--EMLVIYDYSATRILSHLLFHNNHRIGH-SILQWHHRYNIIKSLASAIL 630
+ G C G + +I +Y L L + RI H +LQ+ + +
Sbjct: 93 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY------TSQICKGME 146
Query: 631 YLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIF 690
YL ++ IHR++ + I ++ + ++G F L + L ++ + G IF
Sbjct: 147 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP---IF 200
Query: 691 GYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
Y +PE + + + +DV+SFGVV+ E+ T
Sbjct: 201 WY-APESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 29/218 (13%)
Query: 119 LGSGGFGKV----YRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLR 174
LG G FG V Y + + G VVAVK L E + F E+ + L+H N+V+ +
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 175 GWCVHEDQ--LLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
G C + L L+ +Y+P SL L + E ++ L + + + + YL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYLG 149
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETT 292
+ + IHRD+ T N++++++ ++GDFGL + L + + + F A
Sbjct: 150 TK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA--- 203
Query: 293 RIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PES + + A SDV+SFG+V+ E+ +
Sbjct: 204 ----------PESLTESKFSVA-SDVWSFGVVLYELFT 230
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 519 QRVAEMDFGTA----YQGFLDNH-QYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLV 573
Q++ + +FG+ Y DN + V VK+L S LR F E++ L L+H N+V
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIV 92
Query: 574 QLCGWCTEQG--EMLVIYDYSATRILSHLLFHNNHRIGH-SILQWHHRYNIIKSLASAIL 630
+ G C G + +I +Y L L + RI H +LQ+ + +
Sbjct: 93 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY------TSQICKGME 146
Query: 631 YLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIF 690
YL ++ IHR++ + I ++ + ++G F L + L ++ + G IF
Sbjct: 147 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP---IF 200
Query: 691 GYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
Y +PE + + + +DV+SFGVV+ E+ T
Sbjct: 201 WY-APESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 114/224 (50%), Gaps = 30/224 (13%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
E LG+G FG+V+ + T VAVK L ++G F AE + L+H+ LVRL
Sbjct: 24 ERLGAGQFGEVWMGYY-NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYA- 80
Query: 177 CVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLE 236
V ++ + ++ +YM N SL L + P ++ + +I G+A ++ E+
Sbjct: 81 VVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMA----FIEER-- 133
Query: 237 TQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGG 296
IHRD++ +N+++ + ++ DFGLAR +E ++++ E +
Sbjct: 134 -NYIHRDLRAANILVSDTLSCKIADFGLARLIE-------------DNEYTAREGAKF-- 177
Query: 297 TIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
I + PE+ G+ T KSDV+SFGI++ E+V+ R + YP
Sbjct: 178 PIKWTAPEAINYGTF-TIKSDVWSFGILLTEIVTHGR---IPYP 217
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 123/279 (44%), Gaps = 34/279 (12%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGM-SKCPALRTRFSNELQNLARLRHRNLVQLCG 577
+R+ FG + G+ + H V VK L S P F E + +L+H+ LV+L
Sbjct: 24 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---DAFLAEANLMKQLQHQRLVRLYA 80
Query: 578 WCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWN 637
T Q + +I +Y L L I +I + ++ +A + ++ E
Sbjct: 81 VVT-QEPIYIITEYMENGSLVDFL-KTPSGIKLTI---NKLLDMAAQIAEGMAFIEER-- 133
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
IHR++ ++ I + ++ ++ F LA + N++ R+ + + +PE
Sbjct: 134 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG------AKFPIKWTAPEA 186
Query: 698 IESGEATSMADVYSFGVVVLEVVTGQMAVDFRLP-EGLLVKRVHEFEARKRPLAELVDLS 756
I G T +DV+SFG+++ E+VT R+P G+ V + R +
Sbjct: 187 INYGTFTIKSDVWSFGILLTEIVTHG-----RIPYPGMTNPEVIQNLERGYRM------- 234
Query: 757 LNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
+ + +EL +L++L C PE RP+ + S+L+
Sbjct: 235 VRPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 270
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 29/218 (13%)
Query: 119 LGSGGFGKV----YRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLR 174
LG G FG V Y + + G VVAVK L E + F E+ + L+H N+V+ +
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 175 GWCVHEDQ--LLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
G C + L L+ +Y+P SL L + E ++ L + + + + YL
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYLG 138
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETT 292
+ + IHRD+ T N++++++ ++GDFGL + L + + + F A
Sbjct: 139 TK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA--- 192
Query: 293 RIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PES + + A SDV+SFG+V+ E+ +
Sbjct: 193 ----------PESLTESKFSVA-SDVWSFGVVLYELFT 219
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 519 QRVAEMDFGTA----YQGFLDNH-QYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLV 573
Q++ + +FG+ Y DN + V VK+L S LR F E++ L L+H N+V
Sbjct: 23 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIV 81
Query: 574 QLCGWCTEQG--EMLVIYDYSATRILSHLLFHNNHRIGH-SILQWHHRYNIIKSLASAIL 630
+ G C G + +I +Y L L + RI H +LQ+ + +
Sbjct: 82 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY------TSQICKGME 135
Query: 631 YLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIF 690
YL ++ IHR++ + I ++ + ++G F L + L ++ + G IF
Sbjct: 136 YLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP---IF 189
Query: 691 GYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
Y +PE + + + +DV+SFGVV+ E+ T
Sbjct: 190 WY-APESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 29/218 (13%)
Query: 119 LGSGGFGKV----YRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLR 174
LG G FG V Y + + G VVAVK L E + F E+ + L+H N+V+ +
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 175 GWCVHEDQ--LLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
G C + L L+ +Y+P SL L + E ++ L + + + + YL
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYLG 130
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETT 292
+ + IHRD+ T N++++++ ++GDFGL + L + + + F A
Sbjct: 131 TK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA--- 184
Query: 293 RIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PES + + A SDV+SFG+V+ E+ +
Sbjct: 185 ----------PESLTESKFSVA-SDVWSFGVVLYELFT 211
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 519 QRVAEMDFGTA----YQGFLDNH-QYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLV 573
Q++ + +FG+ Y DN + V VK+L S LR F E++ L L+H N+V
Sbjct: 15 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIV 73
Query: 574 QLCGWCTEQG--EMLVIYDYSATRILSHLLFHNNHRIGH-SILQWHHRYNIIKSLASAIL 630
+ G C G + +I +Y L L + RI H +LQ+ + +
Sbjct: 74 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY------TSQICKGME 127
Query: 631 YLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIF 690
YL ++ IHR++ + I ++ + ++G F L + L ++ + G IF
Sbjct: 128 YLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP---IF 181
Query: 691 GYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
Y +PE + + + +DV+SFGVV+ E+ T
Sbjct: 182 WY-APESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 29/218 (13%)
Query: 119 LGSGGFGKV----YRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLR 174
LG G FG V Y + + G VVAVK L E + F E+ + L+H N+V+ +
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 175 GWCVHEDQ--LLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
G C + L L+ +Y+P SL L + E ++ L + + + + YL
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYLG 129
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETT 292
+ + IHRD+ T N++++++ ++GDFGL + L + + + F A
Sbjct: 130 TK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA--- 183
Query: 293 RIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PES + + A SDV+SFG+V+ E+ +
Sbjct: 184 ----------PESLTESKFSVA-SDVWSFGVVLYELFT 210
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 519 QRVAEMDFGTA----YQGFLDNH-QYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLV 573
Q++ + +FG+ Y DN + V VK+L S LR F E++ L L+H N+V
Sbjct: 14 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIV 72
Query: 574 QLCGWCTEQG--EMLVIYDYSATRILSHLLFHNNHRIGH-SILQWHHRYNIIKSLASAIL 630
+ G C G + +I +Y L L + RI H +LQ+ + +
Sbjct: 73 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY------TSQICKGME 126
Query: 631 YLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIF 690
YL ++ IHR++ + I ++ + ++G F L + L ++ + G IF
Sbjct: 127 YLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP---IF 180
Query: 691 GYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
Y +PE + + + +DV+SFGVV+ E+ T
Sbjct: 181 WY-APESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 110/247 (44%), Gaps = 47/247 (19%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRN 169
F+ LG G FG VY A ++A+K L + + E E+ +HLRH N
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL G+ ++ L+ +Y P ++ R L+ + + ++ I LA AL
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYR-------ELQKLSKFDEQRTATYITELANALS 122
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
Y H + ++IHRD+K N++L S ++ DFG + + S+R
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----------WSVHAPSSRR------ 163
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRA--------------- 334
+ GT+ YLPPE + G + K D++S G++ E + G+
Sbjct: 164 --XXLCGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 220
Query: 335 VDLTYPD 341
V+ T+PD
Sbjct: 221 VEFTFPD 227
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 89/220 (40%), Gaps = 29/220 (13%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRL---GMSKCPALRTRFSNELQNLARL 567
A +F + + + FG Y +++L ++ + + + E++ + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDY----SATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
RH N+++L G+ + + +I +Y + R L L + R I
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------TYIT 115
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
LA+A+ Y H +++VIHR+I + L G +A+F +S
Sbjct: 116 ELANALSYCH---SKRVIHRDIKPENLLLG-----SAGELKIADF----GWSVHAPSSRR 163
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
+ G Y+ PE IE D++S GV+ E + G+
Sbjct: 164 XXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 29/218 (13%)
Query: 119 LGSGGFGKV----YRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLR 174
LG G FG V Y + + G VVAVK L E + F E+ + L+H N+V+ +
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 175 GWCVHEDQ--LLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
G C + L L+ +Y+P SL L + E ++ L + + + + YL
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYLG 162
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETT 292
+ + IHRD+ T N++++++ ++GDFGL + L + + + F A
Sbjct: 163 TK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA--- 216
Query: 293 RIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PES + + A SDV+SFG+V+ E+ +
Sbjct: 217 ----------PESLTESKFSVA-SDVWSFGVVLYELFT 243
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 519 QRVAEMDFGTA----YQGFLDNH-QYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLV 573
Q++ + +FG+ Y DN + V VK+L S LR F E++ L L+H N+V
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIV 105
Query: 574 QLCGWCTEQG--EMLVIYDYSATRILSHLLFHNNHRIGH-SILQWHHRYNIIKSLASAIL 630
+ G C G + +I +Y L L + RI H +LQ+ + +
Sbjct: 106 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY------TSQICKGME 159
Query: 631 YLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIF 690
YL ++ IHR++ + I ++ + ++G F L + L ++ + G IF
Sbjct: 160 YLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP---IF 213
Query: 691 GYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
Y +PE + + + +DV+SFGVV+ E+ T
Sbjct: 214 WY-APESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 114/224 (50%), Gaps = 30/224 (13%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
E LG+G FG+V+ + T VAVK L ++G F AE + L+H+ LVRL
Sbjct: 25 ERLGAGQFGEVWMGYY-NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYA- 81
Query: 177 CVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLE 236
V ++ + ++ +YM N SL L + P ++ + +I G+A ++ E+
Sbjct: 82 VVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMA----FIEER-- 134
Query: 237 TQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGG 296
IHRD++ +N+++ + ++ DFGLAR +E ++++ E +
Sbjct: 135 -NYIHRDLRAANILVSDTLSCKIADFGLARLIE-------------DNEYTAREGAKF-- 178
Query: 297 TIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
I + PE+ G+ T KSDV+SFGI++ E+V+ R + YP
Sbjct: 179 PIKWTAPEAINYGTF-TIKSDVWSFGILLTEIVTHGR---IPYP 218
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 18/204 (8%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGM-SKCPALRTRFSNELQNLARLRHRNLVQLCG 577
+R+ FG + G+ + H V VK L S P F E + +L+H+ LV+L
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---DAFLAEANLMKQLQHQRLVRLYA 81
Query: 578 WCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWN 637
T Q + +I +Y L L I +I + ++ +A + ++ E
Sbjct: 82 VVT-QEPIYIITEYMENGSLVDFL-KTPSGIKLTI---NKLLDMAAQIAEGMAFIEER-- 134
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
IHR++ ++ I + ++ ++ F LA + N++ R+ + + +PE
Sbjct: 135 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG------AKFPIKWTAPEA 187
Query: 698 IESGEATSMADVYSFGVVVLEVVT 721
I G T +DV+SFG+++ E+VT
Sbjct: 188 INYGTFTIKSDVWSFGILLTEIVT 211
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 29/218 (13%)
Query: 119 LGSGGFGKV----YRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLR 174
LG G FG V Y + + G VVAVK L E + F E+ + L+H N+V+ +
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 175 GWCVHEDQ--LLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
G C + L L+ +Y+P SL L + E ++ L + + + + YL
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYLG 137
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETT 292
+ + IHRD+ T N++++++ ++GDFGL + L + + + F A
Sbjct: 138 TK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA--- 191
Query: 293 RIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PES + + A SDV+SFG+V+ E+ +
Sbjct: 192 ----------PESLTESKFSVA-SDVWSFGVVLYELFT 218
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 519 QRVAEMDFGTA----YQGFLDNH-QYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLV 573
Q++ + +FG+ Y DN + V VK+L S LR F E++ L L+H N+V
Sbjct: 22 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIV 80
Query: 574 QLCGWCTEQG--EMLVIYDYSATRILSHLLFHNNHRIGH-SILQWHHRYNIIKSLASAIL 630
+ G C G + +I +Y L L + RI H +LQ+ + +
Sbjct: 81 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY------TSQICKGME 134
Query: 631 YLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIF 690
YL ++ IHR++ + I ++ + ++G F L + L ++ + G IF
Sbjct: 135 YLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP---IF 188
Query: 691 GYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
Y +PE + + + +DV+SFGVV+ E+ T
Sbjct: 189 WY-APESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 29/218 (13%)
Query: 119 LGSGGFGKV----YRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLR 174
LG G FG V Y + + G VVAVK L E + F E+ + L+H N+V+ +
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 175 GWCVHEDQ--LLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
G C + L L+ +Y+P SL L + E ++ L + + + + YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYLG 131
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETT 292
+ + IHRD+ T N++++++ ++GDFGL + L + + + F A
Sbjct: 132 TK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA--- 185
Query: 293 RIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PES + + A SDV+SFG+V+ E+ +
Sbjct: 186 ----------PESLTESKFSVA-SDVWSFGVVLYELFT 212
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 519 QRVAEMDFGTA----YQGFLDNH-QYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLV 573
Q++ + +FG+ Y DN + V VK+L S LR F E++ L L+H N+V
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIV 74
Query: 574 QLCGWCTEQG--EMLVIYDYSATRILSHLLFHNNHRIGH-SILQWHHRYNIIKSLASAIL 630
+ G C G + +I +Y L L + RI H +LQ+ + +
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY------TSQICKGME 128
Query: 631 YLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIF 690
YL ++ IHR++ + I ++ + ++G F L + L ++ + G IF
Sbjct: 129 YLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP---IF 182
Query: 691 GYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
Y +PE + + + +DV+SFGVV+ E+ T
Sbjct: 183 WY-APESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 110/247 (44%), Gaps = 47/247 (19%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRN 169
F+ LG G FG VY A ++A+K L + + E E+ +HLRH N
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL G+ ++ L+ +Y P ++ R L+ + + ++ I LA AL
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYR-------ELQKLSKFDEQRTATYITELANALS 122
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
Y H + ++IHRD+K N++L S ++ DFG W H SS R
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG---WSVHA------PSSRR------- 163
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRA--------------- 334
+ GT+ YLPPE + G + K D++S G++ E + G+
Sbjct: 164 --AALCGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 220
Query: 335 VDLTYPD 341
V+ T+PD
Sbjct: 221 VEFTFPD 227
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 90/220 (40%), Gaps = 29/220 (13%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRL---GMSKCPALRTRFSNELQNLARL 567
A +F + + + FG Y +++L ++ + + + E++ + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDY----SATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
RH N+++L G+ + + +I +Y + R L L + R I
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------TYIT 115
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
LA+A+ Y H +++VIHR+I + L G +A+F +S
Sbjct: 116 ELANALSYCH---SKRVIHRDIKPENLLLG-----SAGELKIADF----GWSVHAPSSRR 163
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
++ G Y+ PE IE D++S GV+ E + G+
Sbjct: 164 AALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 29/218 (13%)
Query: 119 LGSGGFGKV----YRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLR 174
LG G FG V Y + + G VVAVK L E + F E+ + L+H N+V+ +
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 175 GWCVHEDQ--LLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
G C + L L+ +Y+P SL L + E ++ L + + + + YL
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYLG 135
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETT 292
+ + IHRD+ T N++++++ ++GDFGL + L + + + F A
Sbjct: 136 TK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA--- 189
Query: 293 RIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PES + + A SDV+SFG+V+ E+ +
Sbjct: 190 ----------PESLTESKFSVA-SDVWSFGVVLYELFT 216
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 519 QRVAEMDFGTA----YQGFLDNH-QYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLV 573
Q++ + +FG+ Y DN + V VK+L S LR F E++ L L+H N+V
Sbjct: 20 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIV 78
Query: 574 QLCGWCTEQG--EMLVIYDYSATRILSHLLFHNNHRIGH-SILQWHHRYNIIKSLASAIL 630
+ G C G + +I +Y L L + RI H +LQ+ + +
Sbjct: 79 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY------TSQICKGME 132
Query: 631 YLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIF 690
YL ++ IHR++ + I ++ + ++G F L + L ++ + G IF
Sbjct: 133 YLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP---IF 186
Query: 691 GYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
Y +PE + + + +DV+SFGVV+ E+ T
Sbjct: 187 WY-APESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 114/224 (50%), Gaps = 30/224 (13%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
E LG+G FG+V+ + T VAVK L ++G F AE + L+H+ LVRL
Sbjct: 29 ERLGAGQFGEVWMGYY-NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYA- 85
Query: 177 CVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLE 236
V ++ + ++ +YM N SL L + P ++ + +I G+A ++ E+
Sbjct: 86 VVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMA----FIEER-- 138
Query: 237 TQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGG 296
IHRD++ +N+++ + ++ DFGLAR +E ++++ E +
Sbjct: 139 -NYIHRDLRAANILVSDTLSCKIADFGLARLIE-------------DNEYTAREGAKF-- 182
Query: 297 TIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
I + PE+ G+ T KSDV+SFGI++ E+V+ R + YP
Sbjct: 183 PIKWTAPEAINYGTF-TIKSDVWSFGILLTEIVTHGR---IPYP 222
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 18/204 (8%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGM-SKCPALRTRFSNELQNLARLRHRNLVQLCG 577
+R+ FG + G+ + H V VK L S P F E + +L+H+ LV+L
Sbjct: 29 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---DAFLAEANLMKQLQHQRLVRLYA 85
Query: 578 WCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWN 637
T Q + +I +Y L L I +I + ++ +A + ++ E
Sbjct: 86 VVT-QEPIYIITEYMENGSLVDFL-KTPSGIKLTI---NKLLDMAAQIAEGMAFIEER-- 138
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
IHR++ ++ I + ++ ++ F LA + N++ R+ + + +PE
Sbjct: 139 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG------AKFPIKWTAPEA 191
Query: 698 IESGEATSMADVYSFGVVVLEVVT 721
I G T +DV+SFG+++ E+VT
Sbjct: 192 INYGTFTIKSDVWSFGILLTEIVT 215
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 114/224 (50%), Gaps = 30/224 (13%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
E LG+G FG+V+ + T VAVK L ++G F AE + L+H+ LVRL
Sbjct: 14 ERLGAGQFGEVWMGYY-NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYA- 70
Query: 177 CVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLE 236
V ++ + ++ +YM N SL L + P ++ + +I G+A ++ E+
Sbjct: 71 VVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMA----FIEER-- 123
Query: 237 TQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGG 296
IHRD++ +N+++ + ++ DFGLAR +E ++++ E +
Sbjct: 124 -NYIHRDLRAANILVSDTLSCKIADFGLARLIE-------------DNEYTAREGAKF-- 167
Query: 297 TIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
I + PE+ G+ T KSDV+SFGI++ E+V+ R + YP
Sbjct: 168 PIKWTAPEAINYGTF-TIKSDVWSFGILLTEIVTHGR---IPYP 207
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 18/204 (8%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGM-SKCPALRTRFSNELQNLARLRHRNLVQLCG 577
+R+ FG + G+ + H V VK L S P F E + +L+H+ LV+L
Sbjct: 14 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---DAFLAEANLMKQLQHQRLVRLYA 70
Query: 578 WCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWN 637
T Q + +I +Y L L I +I + ++ +A + ++ E
Sbjct: 71 VVT-QEPIYIITEYMENGSLVDFL-KTPSGIKLTI---NKLLDMAAQIAEGMAFIEER-- 123
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
IHR++ ++ I + ++ ++ F LA + N++ R+ + + +PE
Sbjct: 124 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA------KFPIKWTAPEA 176
Query: 698 IESGEATSMADVYSFGVVVLEVVT 721
I G T +DV+SFG+++ E+VT
Sbjct: 177 INYGTFTIKSDVWSFGILLTEIVT 200
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 109/247 (44%), Gaps = 47/247 (19%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRN 169
F+ LG G FG VY A ++A+K L + + E E+ +HLRH N
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL G+ ++ L+ +Y P + + L+ + + ++ I LA AL
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEVYK-------ELQKLSKFDEQRTATYITELANALS 127
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
Y H + ++IHRD+K N++L S ++ DFG W H SS R
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG---WSVHA------PSSRR------- 168
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRA--------------- 334
+ GT+ YLPPE + G + K D++S G++ E + G+
Sbjct: 169 --XXLXGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 225
Query: 335 VDLTYPD 341
V+ T+PD
Sbjct: 226 VEFTFPD 232
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 89/220 (40%), Gaps = 29/220 (13%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRL---GMSKCPALRTRFSNELQNLARL 567
A +F + + + FG Y +++L ++ + + + E++ + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDYSAT----RILSHLLFHNNHRIGHSILQWHHRYNIIK 623
RH N+++L G+ + + +I +Y+ + L L + R I
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTA----------TYIT 120
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
LA+A+ Y H +++VIHR+I + L G +A+F +S
Sbjct: 121 ELANALSYCH---SKRVIHRDIKPENLLLG-----SAGELKIADF----GWSVHAPSSRR 168
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
+ G Y+ PE IE D++S GV+ E + G+
Sbjct: 169 XXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 114/224 (50%), Gaps = 30/224 (13%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
E LG+G FG+V+ + T VAVK L ++G F AE + L+H+ LVRL
Sbjct: 19 ERLGAGQFGEVWMGYY-NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYA- 75
Query: 177 CVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLE 236
V ++ + ++ +YM N SL L + P ++ + +I G+A ++ E+
Sbjct: 76 VVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMA----FIEER-- 128
Query: 237 TQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGG 296
IHRD++ +N+++ + ++ DFGLAR +E ++++ E +
Sbjct: 129 -NYIHRDLRAANILVSDTLSCKIADFGLARLIE-------------DNEYTAREGAKF-- 172
Query: 297 TIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
I + PE+ G+ T KSDV+SFGI++ E+V+ R + YP
Sbjct: 173 PIKWTAPEAINYGTF-TIKSDVWSFGILLTEIVTHGR---IPYP 212
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 123/279 (44%), Gaps = 34/279 (12%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGM-SKCPALRTRFSNELQNLARLRHRNLVQLCG 577
+R+ FG + G+ + H V VK L S P F E + +L+H+ LV+L
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---DAFLAEANLMKQLQHQRLVRLYA 75
Query: 578 WCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWN 637
T Q + +I +Y L L I +I + ++ +A + ++ E
Sbjct: 76 VVT-QEPIYIITEYMENGSLVDFL-KTPSGIKLTI---NKLLDMAAQIAEGMAFIEER-- 128
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
IHR++ ++ I + ++ ++ F LA + N++ R+ + + +PE
Sbjct: 129 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG------AKFPIKWTAPEA 181
Query: 698 IESGEATSMADVYSFGVVVLEVVTGQMAVDFRLP-EGLLVKRVHEFEARKRPLAELVDLS 756
I G T +DV+SFG+++ E+VT R+P G+ V + R +
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHG-----RIPYPGMTNPEVIQNLERGYRM------- 229
Query: 757 LNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
+ + +EL +L++L C PE RP+ + S+L+
Sbjct: 230 VRPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 265
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 29/214 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G FGKVY+A + A K + K E + + E+ +A H N+V+L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
+E+ L ++ ++ ++D V+ LE PL Q + + + AL+YLH + +
Sbjct: 105 YENNLWILIEFCAGGAVDAVM------LELERPLTESQIQVVCKQTLDALNYLH---DNK 155
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
IIHRD+K N++ + +L DFG+ SA+N + + I GT
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGV---------------SAKNTRXIQRRDSFI-GTP 199
Query: 299 GYLPPESF----QKGSVATAKSDVFSFGIVVLEV 328
++ PE K K+DV+S GI ++E+
Sbjct: 200 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 29/214 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G FGKVY+A + A K + K E + + E+ +A H N+V+L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
+E+ L ++ ++ ++D V+ LE PL Q + + + AL+YLH+ +
Sbjct: 105 YENNLWILIEFCAGGAVDAVM------LELERPLTESQIQVVCKQTLDALNYLHDN---K 155
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
IIHRD+K N++ + +L DFG+ SA+N + + I GT
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGV---------------SAKNTRTIQRRDSFI-GTP 199
Query: 299 GYLPPESF----QKGSVATAKSDVFSFGIVVLEV 328
++ PE K K+DV+S GI ++E+
Sbjct: 200 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 29/214 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G FGKVY+A + A K + K E + + E+ +A H N+V+L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
+E+ L ++ ++ ++D V+ LE PL Q + + + AL+YLH + +
Sbjct: 105 YENNLWILIEFCAGGAVDAVM------LELERPLTESQIQVVCKQTLDALNYLH---DNK 155
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
IIHRD+K N++ + +L DFG+ SA+N + + GT
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGV---------------SAKNTR-XIQRRDXFIGTP 199
Query: 299 GYLPPESF----QKGSVATAKSDVFSFGIVVLEV 328
++ PE K K+DV+S GI ++E+
Sbjct: 200 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 111/226 (49%), Gaps = 34/226 (15%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
E LG+G FG+V+ + T VAVK L ++G F AE + L+H+ LVRL
Sbjct: 28 ERLGAGQFGEVWMGYY-NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYA- 84
Query: 177 CVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLE 236
V ++ + ++ +YM N SL L + P ++ + +I G+A ++ E+
Sbjct: 85 VVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMA----FIEER-- 137
Query: 237 TQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGG 296
IHRD++ +N+++ + ++ DFGLAR +E T R G
Sbjct: 138 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN-----------------EXTAREGA 179
Query: 297 --TIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
I + PE+ G+ T KSDV+SFGI++ E+V+ R + YP
Sbjct: 180 KFPIKWTAPEAINYGTF-TIKSDVWSFGILLTEIVTHGR---IPYP 221
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 18/204 (8%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGM-SKCPALRTRFSNELQNLARLRHRNLVQLCG 577
+R+ FG + G+ + H V VK L S P F E + +L+H+ LV+L
Sbjct: 28 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---DAFLAEANLMKQLQHQRLVRLYA 84
Query: 578 WCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWN 637
T Q + +I +Y L L I +I + ++ +A + ++ E
Sbjct: 85 VVT-QEPIYIITEYMENGSLVDFL-KTPSGIKLTI---NKLLDMAAQIAEGMAFIEER-- 137
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
IHR++ ++ I + ++ ++ F LA + N+ R+ + + +PE
Sbjct: 138 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG------AKFPIKWTAPEA 190
Query: 698 IESGEATSMADVYSFGVVVLEVVT 721
I G T +DV+SFG+++ E+VT
Sbjct: 191 INYGTFTIKSDVWSFGILLTEIVT 214
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 111/226 (49%), Gaps = 34/226 (15%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
E LG+G FG+V+ + T VAVK L ++G F AE + L+H+ LVRL
Sbjct: 19 ERLGAGQFGEVWMGYY-NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYA- 75
Query: 177 CVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLE 236
V ++ + ++ +YM N SL L + P ++ + +I G+A ++ E+
Sbjct: 76 VVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMA----FIEER-- 128
Query: 237 TQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGG 296
IHRD++ +N+++ + ++ DFGLAR +E T R G
Sbjct: 129 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN-----------------EXTAREGA 170
Query: 297 --TIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
I + PE+ G+ T KSDV+SFGI++ E+V+ R + YP
Sbjct: 171 KFPIKWTAPEAINYGTF-TIKSDVWSFGILLTEIVTHGR---IPYP 212
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 122/279 (43%), Gaps = 34/279 (12%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGM-SKCPALRTRFSNELQNLARLRHRNLVQLCG 577
+R+ FG + G+ + H V VK L S P F E + +L+H+ LV+L
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---DAFLAEANLMKQLQHQRLVRLYA 75
Query: 578 WCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWN 637
T Q + +I +Y L L I +I + ++ +A + ++ E
Sbjct: 76 VVT-QEPIYIITEYMENGSLVDFL-KTPSGIKLTI---NKLLDMAAQIAEGMAFIEER-- 128
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
IHR++ ++ I + ++ ++ F LA + N+ R+ + + +PE
Sbjct: 129 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG------AKFPIKWTAPEA 181
Query: 698 IESGEATSMADVYSFGVVVLEVVTGQMAVDFRLP-EGLLVKRVHEFEARKRPLAELVDLS 756
I G T +DV+SFG+++ E+VT R+P G+ V + R +
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHG-----RIPYPGMTNPEVIQNLERGYRM------- 229
Query: 757 LNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
+ + +EL +L++L C PE RP+ + S+L+
Sbjct: 230 VRPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 265
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 111/226 (49%), Gaps = 34/226 (15%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
E LG+G FG+V+ + T VAVK L ++G F AE + L+H+ LVRL
Sbjct: 25 ERLGAGQFGEVWMGYY-NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYA- 81
Query: 177 CVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLE 236
V ++ + ++ +YM N SL L + P ++ + +I G+A ++ E+
Sbjct: 82 VVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMA----FIEER-- 134
Query: 237 TQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGG 296
IHRD++ +N+++ + ++ DFGLAR +E T R G
Sbjct: 135 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN-----------------EXTAREGA 176
Query: 297 --TIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
I + PE+ G+ T KSDV+SFGI++ E+V+ R + YP
Sbjct: 177 KFPIKWTAPEAINYGTF-TIKSDVWSFGILLTEIVTHGR---IPYP 218
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 18/204 (8%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGM-SKCPALRTRFSNELQNLARLRHRNLVQLCG 577
+R+ FG + G+ + H V VK L S P F E + +L+H+ LV+L
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---DAFLAEANLMKQLQHQRLVRLYA 81
Query: 578 WCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWN 637
T Q + +I +Y L L I +I + ++ +A + ++ E
Sbjct: 82 VVT-QEPIYIITEYMENGSLVDFL-KTPSGIKLTI---NKLLDMAAQIAEGMAFIEER-- 134
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
IHR++ ++ I + ++ ++ F LA + N+ R+ + + +PE
Sbjct: 135 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG------AKFPIKWTAPEA 187
Query: 698 IESGEATSMADVYSFGVVVLEVVT 721
I G T +DV+SFG+++ E+VT
Sbjct: 188 INYGTFTIKSDVWSFGILLTEIVT 211
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 111/226 (49%), Gaps = 34/226 (15%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
E LG+G FG+V+ + T VAVK L ++G F AE + L+H+ LVRL
Sbjct: 27 ERLGAGQFGEVWMGYY-NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYA- 83
Query: 177 CVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLE 236
V ++ + ++ +YM N SL L + P ++ + +I G+A ++ E+
Sbjct: 84 VVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMA----FIEER-- 136
Query: 237 TQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGG 296
IHRD++ +N+++ + ++ DFGLAR +E T R G
Sbjct: 137 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN-----------------EXTAREGA 178
Query: 297 --TIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
I + PE+ G+ T KSDV+SFGI++ E+V+ R + YP
Sbjct: 179 KFPIKWTAPEAINYGTF-TIKSDVWSFGILLTEIVTHGR---IPYP 220
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 18/204 (8%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGM-SKCPALRTRFSNELQNLARLRHRNLVQLCG 577
+R+ FG + G+ + H V VK L S P F E + +L+H+ LV+L
Sbjct: 27 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---DAFLAEANLMKQLQHQRLVRLYA 83
Query: 578 WCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWN 637
T Q + +I +Y L L I +I + ++ +A + ++ E
Sbjct: 84 VVT-QEPIYIITEYMENGSLVDFL-KTPSGIKLTI---NKLLDMAAQIAEGMAFIEER-- 136
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
IHR++ ++ I + ++ ++ F LA + N+ R+ + + +PE
Sbjct: 137 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG------AKFPIKWTAPEA 189
Query: 698 IESGEATSMADVYSFGVVVLEVVT 721
I G T +DV+SFG+++ E+VT
Sbjct: 190 INYGTFTIKSDVWSFGILLTEIVT 213
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 114/249 (45%), Gaps = 33/249 (13%)
Query: 97 NPRIFSYAELY-IGSNGFDEDEVLGSGGFGKVYRAV---LPSDGTV--VAVKCLAEKGER 150
+P Y E + N + LG+G FGKV A L + V VAVK L
Sbjct: 31 DPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA 90
Query: 151 FEK-TFAAELVAVAHL-RHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEA 208
EK +EL ++HL +H N+V L G C H +L++ +Y L L R+ LE
Sbjct: 91 DEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLET 150
Query: 209 AAPLNWEQRKKIIRGLAAALHYLHEQLE-------TQIIHRDVKTSNVMLDSQYNARLGD 261
R L LH+ + + IHRDV NV+L + + A++GD
Sbjct: 151 DPAFAIANSTASTRDL---LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGD 207
Query: 262 FGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSF 321
FGLAR + ++ Y ++ ++ R+ + ++ PES V T +SDV+S+
Sbjct: 208 FGLARDIMNDSNYIVKGNA------------RL--PVKWMAPESIFD-CVYTVQSDVWSY 252
Query: 322 GIVVLEVVS 330
GI++ E+ S
Sbjct: 253 GILLWEIFS 261
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 116/269 (43%), Gaps = 40/269 (14%)
Query: 540 VLVKRLGMSKCPALRTRFSNELQNLARL-RHRNLVQLCGWCTEQGEMLVIYDYSATRILS 598
V VK L + + +EL+ ++ L +H N+V L G CT G +LVI +Y L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 599 HLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQV------------IHRNIT 646
+ L R +L+ + I S AS LH ++ QV IHR++
Sbjct: 139 NFL-----RRKSRVLETDPAFAIANSTASTRDLLH--FSSQVAQGMAFLASKNCIHRDVA 191
Query: 647 SSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSM 706
+ + L ++G F LA + ND + + V+ +M+PE I T
Sbjct: 192 ARNVLLTNGHVAKIGDFGLARDIM-NDSNYIVKGNARLPVK----WMAPESIFDCVYTVQ 246
Query: 707 ADVYSFGVVVLEVVTGQMAVDFRLPEGLLVK-RVHEFEARKRPLAELVDLSLNGEYNHKE 765
+DV+S+G+++ E+ ++ G+LV + ++ +A+ + K
Sbjct: 247 SDVWSYGILLWEI----FSLGLNPYPGILVNSKFYKLVKDGYQMAQ-------PAFAPKN 295
Query: 766 LMRLIKLGIACTLSNPELRPSMRQILSIL 794
+ +++ AC P RP+ +QI S L
Sbjct: 296 IYSIMQ---ACWALEPTHRPTFQQICSFL 321
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 111/226 (49%), Gaps = 34/226 (15%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
E LG+G FG+V+ + T VAVK L ++G F AE + L+H+ LVRL
Sbjct: 19 ERLGAGQFGEVWMGYY-NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYA- 75
Query: 177 CVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLE 236
V ++ + ++ +YM N SL L + P ++ + +I G+A ++ E+
Sbjct: 76 VVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMA----FIEER-- 128
Query: 237 TQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGG 296
IHRD++ +N+++ + ++ DFGLAR +E T R G
Sbjct: 129 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN-----------------EXTAREGA 170
Query: 297 --TIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
I + PE+ G+ T KSDV+SFGI++ E+V+ R + YP
Sbjct: 171 KFPIKWTAPEAINYGTF-TIKSDVWSFGILLTEIVTHGR---IPYP 212
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 18/204 (8%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGM-SKCPALRTRFSNELQNLARLRHRNLVQLCG 577
+R+ FG + G+ + H V VK L S P F E + +L+H+ LV+L
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---DAFLAEANLMKQLQHQRLVRLYA 75
Query: 578 WCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWN 637
T Q + +I +Y L L I +I + ++ +A + ++ E
Sbjct: 76 VVT-QEPIYIITEYMENGSLVDFL-KTPSGIKLTI---NKLLDMAAQIAEGMAFIEER-- 128
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
IHR++ ++ I + ++ ++ F LA + N+ R+ + + +PE
Sbjct: 129 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG------AKFPIKWTAPEA 181
Query: 698 IESGEATSMADVYSFGVVVLEVVT 721
I G T +DV+SFG+++ E+VT
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 108/221 (48%), Gaps = 31/221 (14%)
Query: 116 DEVLGSGGFGKVY--RAVLPSDGTV-VAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
++++GSG G+V R +P V VA+K L A ER + F +E + H N++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
RL G ++V +YM N SLD F R + + Q ++RG+ A + YL
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLD--TFLRTHDGQ----FTIMQLVGMLRGVGAGMRYL 167
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
+ +HRD+ NV++DS ++ DFGL+R LE + A
Sbjct: 168 SD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD---------------AAX 209
Query: 292 TRIGGTIG--YLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
T GG I + PE+ + ++A SDV+SFG+V+ EV++
Sbjct: 210 TTTGGKIPIRWTAPEAIAFRTFSSA-SDVWSFGVVMWEVLA 249
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 81/182 (44%), Gaps = 12/182 (6%)
Query: 540 VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSH 599
V +K L R F +E + + H N+++L G T +++ +Y L
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 600 LLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPR 659
L H +I+Q +++ + + + YL + +HR++ + + +D ++ +
Sbjct: 140 FL--RTHDGQFTIMQL---VGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCK 191
Query: 660 LGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEV 719
+ F L+ L + T G +R + +PE I +S +DV+SFGVV+ EV
Sbjct: 192 VSDFGLSRVLEDDPDAAXTTTGGKIPIR----WTAPEAIAFRTFSSASDVWSFGVVMWEV 247
Query: 720 VT 721
+
Sbjct: 248 LA 249
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 109/221 (49%), Gaps = 34/221 (15%)
Query: 117 EVLGSGGFGKVYRAV-LPSDGTV---VAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLV 171
+VLGSG FG VY+ + +P TV VA+K L E G + F E + +A + H +LV
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
RL G C+ + LV MP+ L + +N+ + LNW + +A + YL
Sbjct: 81 RLLGVCLSP-TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYL 133
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
E+ +++HRD+ NV++ S + ++ DFGLAR LE + + E
Sbjct: 134 EER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK----------------EY 174
Query: 292 TRIGG--TIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
GG I ++ E T +SDV+S+G+ + E+++
Sbjct: 175 NADGGKMPIKWMALECIHYRKF-THQSDVWSYGVTIWELMT 214
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 87/201 (43%), Gaps = 19/201 (9%)
Query: 526 FGTAYQGFLDNHQY-----VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCT 580
FGT Y+G V +K L + P F +E +A + H +LV+L G C
Sbjct: 28 FGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCL 87
Query: 581 EQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQV 640
LV +L ++ H ++ +L W +A ++YL E ++
Sbjct: 88 SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYLEE---RRL 138
Query: 641 IHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIES 700
+HR++ + + + + ++ F LA L D A G ++ +M+ E I
Sbjct: 139 VHRDLAARNVLVKSPNHVKITDFGLARLL-EGDEKEYNADGGKMPIK----WMALECIHY 193
Query: 701 GEATSMADVYSFGVVVLEVVT 721
+ T +DV+S+GV + E++T
Sbjct: 194 RKFTHQSDVWSYGVTIWELMT 214
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 111/226 (49%), Gaps = 34/226 (15%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
E LG+G FG+V+ + T VAVK L ++G F AE + L+H+ LVRL
Sbjct: 20 ERLGAGQFGEVWMGYY-NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYA- 76
Query: 177 CVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLE 236
V ++ + ++ +YM N SL L + P ++ + +I G+A ++ E+
Sbjct: 77 VVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMA----FIEER-- 129
Query: 237 TQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGG 296
IHRD++ +N+++ + ++ DFGLAR +E T R G
Sbjct: 130 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN-----------------EXTAREGA 171
Query: 297 --TIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
I + PE+ G+ T KSDV+SFGI++ E+V+ R + YP
Sbjct: 172 KFPIKWTAPEAINYGTF-TIKSDVWSFGILLTEIVTHGR---IPYP 213
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 18/204 (8%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGM-SKCPALRTRFSNELQNLARLRHRNLVQLCG 577
+R+ FG + G+ + H V VK L S P F E + +L+H+ LV+L
Sbjct: 20 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---DAFLAEANLMKQLQHQRLVRLYA 76
Query: 578 WCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWN 637
T Q + +I +Y L L I +I + ++ +A + ++ E
Sbjct: 77 VVT-QEPIYIITEYMENGSLVDFL-KTPSGIKLTI---NKLLDMAAQIAEGMAFIEER-- 129
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
IHR++ ++ I + ++ ++ F LA + N+ R+ + + +PE
Sbjct: 130 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG------AKFPIKWTAPEA 182
Query: 698 IESGEATSMADVYSFGVVVLEVVT 721
I G T +DV+SFG+++ E+VT
Sbjct: 183 INYGTFTIKSDVWSFGILLTEIVT 206
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 111/226 (49%), Gaps = 34/226 (15%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
E LG+G FG+V+ + T VAVK L ++G F AE + L+H+ LVRL
Sbjct: 21 ERLGAGQFGEVWMGYY-NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYA- 77
Query: 177 CVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLE 236
V ++ + ++ +YM N SL L + P ++ + +I G+A ++ E+
Sbjct: 78 VVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMA----FIEER-- 130
Query: 237 TQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGG 296
IHRD++ +N+++ + ++ DFGLAR +E T R G
Sbjct: 131 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN-----------------EXTAREGA 172
Query: 297 --TIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
I + PE+ G+ T KSDV+SFGI++ E+V+ R + YP
Sbjct: 173 KFPIKWTAPEAINYGTF-TIKSDVWSFGILLTEIVTHGR---IPYP 214
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 18/204 (8%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGM-SKCPALRTRFSNELQNLARLRHRNLVQLCG 577
+R+ FG + G+ + H V VK L S P F E + +L+H+ LV+L
Sbjct: 21 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---DAFLAEANLMKQLQHQRLVRLYA 77
Query: 578 WCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWN 637
T Q + +I +Y L L I +I + ++ +A + ++ E
Sbjct: 78 VVT-QEPIYIITEYMENGSLVDFL-KTPSGIKLTI---NKLLDMAAQIAEGMAFIEER-- 130
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
IHR++ ++ I + ++ ++ F LA + N+ R+ + + +PE
Sbjct: 131 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG------AKFPIKWTAPEA 183
Query: 698 IESGEATSMADVYSFGVVVLEVVT 721
I G T +DV+SFG+++ E+VT
Sbjct: 184 INYGTFTIKSDVWSFGILLTEIVT 207
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 108/225 (48%), Gaps = 37/225 (16%)
Query: 116 DEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRG 175
+EV+G G FG V +A + VA+K + + ER K F EL ++ + H N+V+L G
Sbjct: 14 EEVVGRGAFGVVCKAKWRAKD--VAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYG 69
Query: 176 WCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGL---AAALHYLH 232
C+ + + LV +Y SL VL A PL + + + + YLH
Sbjct: 70 ACL--NPVCLVMEYAEGGSLYNVL-------HGAEPLPYYTAAHAMSWCLQCSQGVAYLH 120
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNA-RLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
+IHRD+K N++L + ++ DFG +A + Q H+
Sbjct: 121 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFG----------------TACDIQTHM--- 161
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
T G+ ++ PE F+ GS + K DVFS+GI++ EV++ R+ D
Sbjct: 162 TNNKGSAAWMAPEVFE-GSNYSEKCDVFSWGIILWEVITRRKPFD 205
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 102/244 (41%), Gaps = 33/244 (13%)
Query: 554 RTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSIL 613
R F EL+ L+R+ H N+V+L G C + ++ +Y+ L ++L H + +
Sbjct: 46 RKAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVL-HGAEPLPYYTA 102
Query: 614 QWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRND 673
H + + + YLH + +IHR++ P L A L D
Sbjct: 103 A--HAMSWCLQCSQGVAYLHSMQPKALIHRDLKP----------PNLLLVAGGTVLKICD 150
Query: 674 HGHRKATSGNRSV-RGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVD-FRLP 731
G + + +G +M+PE E + DV+S+G+++ EV+T + D P
Sbjct: 151 FGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP 210
Query: 732 EGLLVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIK-LGIACTLSNPELRPSMRQI 790
++ VH + PL K L + I+ L C +P RPSM +I
Sbjct: 211 AFRIMWAVH--NGTRPPLI-------------KNLPKPIESLMTRCWSKDPSQRPSMEEI 255
Query: 791 LSIL 794
+ I+
Sbjct: 256 VKIM 259
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 108/225 (48%), Gaps = 37/225 (16%)
Query: 116 DEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRG 175
+EV+G G FG V +A + VA+K + + ER K F EL ++ + H N+V+L G
Sbjct: 13 EEVVGRGAFGVVCKAKWRAKD--VAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYG 68
Query: 176 WCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGL---AAALHYLH 232
C+ + + LV +Y SL VL A PL + + + + YLH
Sbjct: 69 ACL--NPVCLVMEYAEGGSLYNVL-------HGAEPLPYYTAAHAMSWCLQCSQGVAYLH 119
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNA-RLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
+IHRD+K N++L + ++ DFG +A + Q H+
Sbjct: 120 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFG----------------TACDIQTHM--- 160
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
T G+ ++ PE F+ GS + K DVFS+GI++ EV++ R+ D
Sbjct: 161 TNNKGSAAWMAPEVFE-GSNYSEKCDVFSWGIILWEVITRRKPFD 204
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 102/244 (41%), Gaps = 33/244 (13%)
Query: 554 RTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSIL 613
R F EL+ L+R+ H N+V+L G C + ++ +Y+ L ++L H + +
Sbjct: 45 RKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVL-HGAEPLPYYTA 101
Query: 614 QWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRND 673
H + + + YLH + +IHR++ P L A L D
Sbjct: 102 A--HAMSWCLQCSQGVAYLHSMQPKALIHRDLKP----------PNLLLVAGGTVLKICD 149
Query: 674 HGHRKATSGNRSV-RGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVD-FRLP 731
G + + +G +M+PE E + DV+S+G+++ EV+T + D P
Sbjct: 150 FGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP 209
Query: 732 EGLLVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIK-LGIACTLSNPELRPSMRQI 790
++ VH + PL K L + I+ L C +P RPSM +I
Sbjct: 210 AFRIMWAVH--NGTRPPLI-------------KNLPKPIESLMTRCWSKDPSQRPSMEEI 254
Query: 791 LSIL 794
+ I+
Sbjct: 255 VKIM 258
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 29/218 (13%)
Query: 119 LGSGGFGKV----YRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLR 174
LG G FG V Y + + G VVAVK L E + F E+ + L+H N+V+ +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 175 GWCVHEDQ--LLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
G C + L L+ +++P SL L + E ++ L + + + + YL
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQ------ICKGMEYLG 134
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETT 292
+ + IHRD+ T N++++++ ++GDFGL + L + + + F A
Sbjct: 135 TK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA--- 188
Query: 293 RIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PES + + A SDV+SFG+V+ E+ +
Sbjct: 189 ----------PESLTESKFSVA-SDVWSFGVVLYELFT 215
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 519 QRVAEMDFGTA----YQGFLDNH-QYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLV 573
+++ + +FG+ Y DN + V VK+L S LR F E++ L L+H N+V
Sbjct: 19 RQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIV 77
Query: 574 QLCGWCTEQG--EMLVIYDYSATRILSHLLFHNNHRIGH-SILQWHHRYNIIKSLASAIL 630
+ G C G + +I ++ L L + RI H +LQ+ + +
Sbjct: 78 KYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQY------TSQICKGME 131
Query: 631 YLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIF 690
YL ++ IHR++ + I ++ + ++G F L + L ++ + G IF
Sbjct: 132 YLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP---IF 185
Query: 691 GYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
Y +PE + + + +DV+SFGVV+ E+ T
Sbjct: 186 WY-APESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 109/259 (42%), Gaps = 38/259 (14%)
Query: 110 SNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRH-- 167
++ F+E VLG G FG+V +A D A+K + E+ T +E+ +A L H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS-TILSEVXLLASLNHQY 63
Query: 168 -----------RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQ 216
RN V+ + L + +Y NR+L ++ ENL W
Sbjct: 64 VVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLI--HSENLNQQRDEYW-- 119
Query: 217 RKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQM 276
++ R + AL Y+H Q IIHR++K N+ +D N ++GDFGLA+ + L +
Sbjct: 120 --RLFRQILEALSYIHSQ---GIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSL--DI 172
Query: 277 RTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLE--------- 327
++N T GT Y+ E K D +S GI+ E
Sbjct: 173 LKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPFSTGX 232
Query: 328 ----VVSGRRAVDLTYPDD 342
++ R+V + +P D
Sbjct: 233 ERVNILKKLRSVSIEFPPD 251
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 99/240 (41%), Gaps = 38/240 (15%)
Query: 565 ARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKS 624
A L RN V+ ++ + + +Y R L L+ N Q + + +
Sbjct: 70 AWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLN-----QQRDEYWRLFRQ 124
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRN------DHGHRK 678
+ A+ Y+H ++ +IHRN+ I +D N ++G F LA+ + R+ D +
Sbjct: 125 ILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 679 ATSGN-RSVRGIFGYMSPEYIE-SGEATSMADVYSFGVVVLEVV----TGQMAVDFRLPE 732
+S N S G Y++ E ++ +G D YS G++ E + TG V+
Sbjct: 182 GSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPFSTGXERVN----- 236
Query: 733 GLLVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792
++K++ P D N K+++RL+ +P RP R +L+
Sbjct: 237 --ILKKLRSVSIEFPP-----DFDDNKXKVEKKIIRLL------IDHDPNKRPGARTLLN 283
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 124/257 (48%), Gaps = 42/257 (16%)
Query: 108 IGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL--------AEKGERFEKTFAAEL 159
+ N + ++ +G GGFG V++ L D +VVA+K L E E+F++ F E+
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQE-FQREV 74
Query: 160 VAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKK 219
+++L H N+V+L G + + +V +++P L L L+ A P+ W + +
Sbjct: 75 FIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRL------LDKAHPIKWSVKLR 126
Query: 220 IIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDS-----QYNARLGDFGLARWLEHELQY 274
++ +A + Y+ Q I+HRD+++ N+ L S A++ DFG ++ H +
Sbjct: 127 LMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSV-- 183
Query: 275 QMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRA 334
+ N Q+ ET IG ES+ T K+D +SF +++ +++G
Sbjct: 184 ---SGLLGNFQWMAPET--IGAE-----EESY------TEKADTYSFAMILYTILTGEGP 227
Query: 335 VDLTYPDDQIILLDWIR 351
D Y +I ++ IR
Sbjct: 228 FD-EYSYGKIKFINMIR 243
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 103/227 (45%), Gaps = 24/227 (10%)
Query: 511 ATNNFSESQRVAEMDFGTAYQG-FLDNHQYVLVKRL------GMSKCPALRTRFSNELQN 563
A N +++ + FG ++G + + V +K L G ++ F E+
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 564 LARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
++ L H N+V+L G M++ ++ L H L H I +W + ++
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRLLDKAHPI-----KWSVKLRLML 129
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDP-DMNPRLGSFALAEFLTRNDHGHRKATSG 682
+A I Y+ + N ++HR++ S I L D N + + +A+F T H + SG
Sbjct: 130 DIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCA-KVADFGTSQQSVH--SVSG 185
Query: 683 NRSVRGIFGYMSPEYIESGEA--TSMADVYSFGVVVLEVVTGQMAVD 727
+ G F +M+PE I + E T AD YSF +++ ++TG+ D
Sbjct: 186 ---LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 110/233 (47%), Gaps = 34/233 (14%)
Query: 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVV--AVKCLAEKGERFE-KTFAAELVAVAHL-R 166
N +V+G G FG+V +A + DG + A+K + E + + + FA EL + L
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 167 HRNLVRLRGWCVHEDQLLLVYDYMPNRSL------DRVLFRRPENLEA---AAPLNWEQR 217
H N++ L G C H L L +Y P+ +L RVL P A A+ L+ +Q
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 218 KKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMR 277
+A + YL ++ Q IHR++ N+++ Y A++ DFGL+R E ++ M
Sbjct: 142 LHFAADVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 198
Query: 278 TSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
R ++ ES SV T SDV+S+G+++ E+VS
Sbjct: 199 RLPVR-----------------WMAIESLNY-SVYTTNSDVWSYGVLLWEIVS 233
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 106/250 (42%), Gaps = 36/250 (14%)
Query: 557 FSNELQNLARL-RHRNLVQLCGWCTEQGEMLVIYDYSA----------TRILSHLLFHNN 605
F+ EL+ L +L H N++ L G C +G + + +Y+ +R+L
Sbjct: 69 FAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAI 128
Query: 606 HRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFAL 665
S L + +A + YL ++ Q IHRN+ + I + + ++ F L
Sbjct: 129 ANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGL 185
Query: 666 AEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMA 725
+R + K T G VR +M+ E + T+ +DV+S+GV++ E+V+
Sbjct: 186 ----SRGQEVYVKKTMGRLPVR----WMAIESLNYSVYTTNSDVWSYGVLLWEIVS---- 233
Query: 726 VDFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRP 785
+ G+ ++E K P ++ LN + +LMR C P RP
Sbjct: 234 LGGTPYCGMTCAELYE----KLPQGYRLEKPLNCDDEVYDLMR------QCWREKPYERP 283
Query: 786 SMRQILSILD 795
S QIL L+
Sbjct: 284 SFAQILVSLN 293
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 109/221 (49%), Gaps = 34/221 (15%)
Query: 117 EVLGSGGFGKVYRAV-LPSDGTV---VAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLV 171
+VLGSG FG VY+ + +P TV VA+K L E G + F E + +A + H +LV
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
RL G C+ + LV MP+ L + +N+ + LNW + +A + YL
Sbjct: 104 RLLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYL 156
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
E+ +++HRD+ NV++ S + ++ DFGLAR LE + + E
Sbjct: 157 EER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK----------------EY 197
Query: 292 TRIGG--TIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
GG I ++ E T +SDV+S+G+ + E+++
Sbjct: 198 NADGGKMPIKWMALECIHYRKF-THQSDVWSYGVTIWELMT 237
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 87/201 (43%), Gaps = 19/201 (9%)
Query: 526 FGTAYQGFLDNHQ-----YVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCT 580
FGT Y+G V +K L + P F +E +A + H +LV+L G C
Sbjct: 51 FGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCL 110
Query: 581 EQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQV 640
LV +L ++ H ++ +L W +A ++YL E ++
Sbjct: 111 SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYLEE---RRL 161
Query: 641 IHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIES 700
+HR++ + + + + ++ F LA L D A G ++ +M+ E I
Sbjct: 162 VHRDLAARNVLVKSPNHVKITDFGLARLL-EGDEKEYNADGGKMPIK----WMALECIHY 216
Query: 701 GEATSMADVYSFGVVVLEVVT 721
+ T +DV+S+GV + E++T
Sbjct: 217 RKFTHQSDVWSYGVTIWELMT 237
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 103/233 (44%), Gaps = 25/233 (10%)
Query: 110 SNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRH-- 167
++ F+E VLG G FG+V +A D A+K + E+ T +E++ +A L H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS-TILSEVMLLASLNHQY 63
Query: 168 -----------RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQ 216
RN V+ + L + +Y N +L ++ ENL W
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLI--HSENLNQQRDEYW-- 119
Query: 217 RKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQM 276
++ R + AL Y+H Q IIHRD+K N+ +D N ++GDFGLA+ + L +
Sbjct: 120 --RLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSL--DI 172
Query: 277 RTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVV 329
++N T GT Y+ E K D++S GI+ E++
Sbjct: 173 LKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 565 ARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKS 624
A L RN V+ ++ + + +Y L L+ N Q + + +
Sbjct: 70 AWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLN-----QQRDEYWRLFRQ 124
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRN------DHGHRK 678
+ A+ Y+H ++ +IHR++ I +D N ++G F LA+ + R+ D +
Sbjct: 125 ILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 679 ATSGN-RSVRGIFGYMSPEYIE-SGEATSMADVYSFGVVVLEVV 720
+S N S G Y++ E ++ +G D+YS G++ E++
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 108/221 (48%), Gaps = 31/221 (14%)
Query: 116 DEVLGSGGFGKVY--RAVLPSDGTV-VAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
++++GSG G+V R +P V VA+K L A ER + F +E + H N++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
RL G ++V +YM N SLD F R + + Q ++RG+ A + YL
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLD--TFLRTHDGQ----FTIMQLVGMLRGVGAGMRYL 167
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
+ +HRD+ NV++DS ++ DFGL+R LE + A
Sbjct: 168 SD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD---------------AAY 209
Query: 292 TRIGGTIG--YLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
T GG I + PE+ + ++A SDV+SFG+V+ EV++
Sbjct: 210 TTTGGKIPIRWTAPEAIAFRTFSSA-SDVWSFGVVMWEVLA 249
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 81/182 (44%), Gaps = 12/182 (6%)
Query: 540 VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSH 599
V +K L R F +E + + H N+++L G T +++ +Y L
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 600 LLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPR 659
L H +I+Q +++ + + + YL + +HR++ + + +D ++ +
Sbjct: 140 FL--RTHDGQFTIMQL---VGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCK 191
Query: 660 LGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEV 719
+ F L+ L + T G +R + +PE I +S +DV+SFGVV+ EV
Sbjct: 192 VSDFGLSRVLEDDPDAAYTTTGGKIPIR----WTAPEAIAFRTFSSASDVWSFGVVMWEV 247
Query: 720 VT 721
+
Sbjct: 248 LA 249
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 106/228 (46%), Gaps = 41/228 (17%)
Query: 119 LGSGGFGKVYR---AVLPSDGTV--VAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVR 172
LG G FG+VY + +P+D + VAVK L E E+ E F E + ++ L H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 173 LRGWCVHEDQLLLVYDYMPN---RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
G + ++ + M +S R RP + A L+ + R +A
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH---VARDIACGCQ 155
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYN---ARLGDFGLARWLEHELQYQMRTSSARNHQF 286
YL E IHRD+ N +L A++GDFG+AR
Sbjct: 156 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------------------DI 194
Query: 287 HLAETTRIGGT----IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ A R GG + ++PPE+F +G + T+K+D +SFG+++ E+ S
Sbjct: 195 YRASYYRKGGCAMLPVKWMPPEAFMEG-IFTSKTDTWSFGVLLWEIFS 241
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 12/169 (7%)
Query: 557 FSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGH-SILQW 615
F E +++L H+N+V+ G + ++ + A L L R S L
Sbjct: 81 FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 140
Query: 616 HHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLD---PDMNPRLGSFALAEFLTRN 672
++ + +A YL E IHR+I + L P ++G F +A + R
Sbjct: 141 LDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 197
Query: 673 DHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
+ +RK V+ +M PE G TS D +SFGV++ E+ +
Sbjct: 198 SY-YRKGGCAMLPVK----WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 124/257 (48%), Gaps = 42/257 (16%)
Query: 108 IGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL--------AEKGERFEKTFAAEL 159
+ N + ++ +G GGFG V++ L D +VVA+K L E E+F++ F E+
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQE-FQREV 74
Query: 160 VAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKK 219
+++L H N+V+L G + + +V +++P L L L+ A P+ W + +
Sbjct: 75 FIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRL------LDKAHPIKWSVKLR 126
Query: 220 IIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDS-----QYNARLGDFGLARWLEHELQY 274
++ +A + Y+ Q I+HRD+++ N+ L S A++ DF L++ H +
Sbjct: 127 LMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSV-- 183
Query: 275 QMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRA 334
+ N Q+ ET IG ES+ T K+D +SF +++ +++G
Sbjct: 184 ---SGLLGNFQWMAPET--IGAE-----EESY------TEKADTYSFAMILYTILTGEGP 227
Query: 335 VDLTYPDDQIILLDWIR 351
D Y +I ++ IR
Sbjct: 228 FD-EYSYGKIKFINMIR 243
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 102/227 (44%), Gaps = 24/227 (10%)
Query: 511 ATNNFSESQRVAEMDFGTAYQG-FLDNHQYVLVKRL------GMSKCPALRTRFSNELQN 563
A N +++ + FG ++G + + V +K L G ++ F E+
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 564 LARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
++ L H N+V+L G M++ ++ L H L H I +W + ++
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRLLDKAHPI-----KWSVKLRLML 129
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDP-DMNPRLGSFALAEFLTRNDHGHRKATSG 682
+A I Y+ + N ++HR++ S I L D N + + +A+F H + SG
Sbjct: 130 DIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCA-KVADFSLSQQSVH--SVSG 185
Query: 683 NRSVRGIFGYMSPEYIESGEA--TSMADVYSFGVVVLEVVTGQMAVD 727
+ G F +M+PE I + E T AD YSF +++ ++TG+ D
Sbjct: 186 ---LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 29/218 (13%)
Query: 119 LGSGGFGKV----YRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLR 174
LG G FG V Y + + G VVAVK L E + F E+ + L+H N+V+ +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 175 GWCVHEDQ--LLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
G C + L L+ +Y+P SL L E ++ L + + + + YL
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQ------ICKGMEYLG 134
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETT 292
+ + IHRD+ T N++++++ ++GDFGL + L + + + F A
Sbjct: 135 TK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA--- 188
Query: 293 RIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PES + + A SDV+SFG+V+ E+ +
Sbjct: 189 ----------PESLTESKFSVA-SDVWSFGVVLYELFT 215
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 519 QRVAEMDFGTA----YQGFLDNH-QYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLV 573
Q++ + +FG+ Y DN + V VK+L S LR F E++ L L+H N+V
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIV 77
Query: 574 QLCGWCTEQG--EMLVIYDYSATRILSHLLFHNNHRIGH-SILQWHHRYNIIKSLASAIL 630
+ G C G + +I +Y L L + RI H +LQ+ + +
Sbjct: 78 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQY------TSQICKGME 131
Query: 631 YLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIF 690
YL ++ IHR++ + I ++ + ++G F L + L ++ + G IF
Sbjct: 132 YLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP---IF 185
Query: 691 GYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
Y +PE + + + +DV+SFGVV+ E+ T
Sbjct: 186 WY-APESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 106/228 (46%), Gaps = 41/228 (17%)
Query: 119 LGSGGFGKVYR---AVLPSDGTV--VAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVR 172
LG G FG+VY + +P+D + VAVK L E E+ E F E + ++ L H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 173 LRGWCVHEDQLLLVYDYMPN---RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
G + ++ + M +S R RP + A L+ + R +A
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH---VARDIACGCQ 169
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYN---ARLGDFGLARWLEHELQYQMRTSSARNHQF 286
YL E IHRD+ N +L A++GDFG+AR
Sbjct: 170 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------------------DI 208
Query: 287 HLAETTRIGGT----IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ A R GG + ++PPE+F +G + T+K+D +SFG+++ E+ S
Sbjct: 209 YRASYYRKGGCAMLPVKWMPPEAFMEG-IFTSKTDTWSFGVLLWEIFS 255
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 12/169 (7%)
Query: 557 FSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGH-SILQW 615
F E +++L H+N+V+ G + ++ + A L L R S L
Sbjct: 95 FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 616 HHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLD---PDMNPRLGSFALAEFLTRN 672
++ + +A YL E IHR+I + L P ++G F +A + R
Sbjct: 155 LDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 211
Query: 673 DHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
+ +RK V+ +M PE G TS D +SFGV++ E+ +
Sbjct: 212 SY-YRKGGCAMLPVK----WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 114/249 (45%), Gaps = 33/249 (13%)
Query: 97 NPRIFSYAELY-IGSNGFDEDEVLGSGGFGKVYRAV---LPSDGTV--VAVKCLAEKGER 150
+P Y E + N + LG+G FGKV A L + V VAVK L
Sbjct: 31 DPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA 90
Query: 151 FEK-TFAAELVAVAHL-RHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEA 208
EK +EL ++HL +H N+V L G C H +L++ +Y L L R+ LE
Sbjct: 91 DEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLET 150
Query: 209 AAPLNWEQRKKIIRGL-------AAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGD 261
R L A + +L + IHRDV NV+L + + A++GD
Sbjct: 151 DPAFAIANSTLSTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGD 207
Query: 262 FGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSF 321
FGLAR + ++ Y ++ ++ R+ + ++ PES V T +SDV+S+
Sbjct: 208 FGLARDIMNDSNYIVKGNA------------RL--PVKWMAPESIFD-CVYTVQSDVWSY 252
Query: 322 GIVVLEVVS 330
GI++ E+ S
Sbjct: 253 GILLWEIFS 261
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 114/265 (43%), Gaps = 32/265 (12%)
Query: 540 VLVKRLGMSKCPALRTRFSNELQNLARL-RHRNLVQLCGWCTEQGEMLVIYDYSATRILS 598
V VK L + + +EL+ ++ L +H N+V L G CT G +LVI +Y L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 599 HLLFHNNH--------RIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAI 650
+ L + I +S L + +A + +L ++ IHR++ + +
Sbjct: 139 NFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNV 195
Query: 651 TLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVY 710
L ++G F LA + ND + + V+ +M+PE I T +DV+
Sbjct: 196 LLTNGHVAKIGDFGLARDIM-NDSNYIVKGNARLPVK----WMAPESIFDCVYTVQSDVW 250
Query: 711 SFGVVVLEVVTGQMAVDFRLPEGLLVK-RVHEFEARKRPLAELVDLSLNGEYNHKELMRL 769
S+G+++ E+ ++ G+LV + ++ +A+ + K + +
Sbjct: 251 SYGILLWEI----FSLGLNPYPGILVNSKFYKLVKDGYQMAQ-------PAFAPKNIYSI 299
Query: 770 IKLGIACTLSNPELRPSMRQILSIL 794
++ AC P RP+ +QI S L
Sbjct: 300 MQ---ACWALEPTHRPTFQQICSFL 321
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 117/258 (45%), Gaps = 42/258 (16%)
Query: 97 NPRIFSYAELY-IGSNGFDEDEVLGSGGFGKVYRAV---LPSDGTV--VAVKCLAEKGER 150
+P Y E + N + LG+G FGKV A L + V VAVK L
Sbjct: 16 DPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA 75
Query: 151 FEK-TFAAELVAVAHL-RHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRR------ 202
EK +EL ++HL +H N+V L G C H +L++ +Y L L R+
Sbjct: 76 DEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLG 135
Query: 203 --------PENL--EAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLD 252
PE L E PL +A + +L + IHRDV NV+L
Sbjct: 136 PSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLT 192
Query: 253 SQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVA 312
+ + A++GDFGLAR + ++ Y ++ ++ R+ + ++ PES V
Sbjct: 193 NGHVAKIGDFGLARDIMNDSNYIVKGNA------------RL--PVKWMAPESIFD-CVY 237
Query: 313 TAKSDVFSFGIVVLEVVS 330
T +SDV+S+GI++ E+ S
Sbjct: 238 TVQSDVWSYGILLWEIFS 255
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 116/274 (42%), Gaps = 41/274 (14%)
Query: 540 VLVKRLGMSKCPALRTRFSNELQNLARL-RHRNLVQLCGWCTEQGEMLVIYDYSA-TRIL 597
V VK L + + +EL+ ++ L +H N+V L G CT G +LVI +Y +L
Sbjct: 64 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 123
Query: 598 SHLLFHNNHRIGHSI----------------LQWHHRYNIIKSLASAILYLHEEWNEQVI 641
+ L +G S+ L+ + +A + +L ++ I
Sbjct: 124 NFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLA---SKNCI 180
Query: 642 HRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESG 701
HR++ + + L ++G F LA + ND + + V+ +M+PE I
Sbjct: 181 HRDVAARNVLLTNGHVAKIGDFGLARDIM-NDSNYIVKGNARLPVK----WMAPESIFDC 235
Query: 702 EATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVK-RVHEFEARKRPLAELVDLSLNGE 760
T +DV+S+G+++ E+ ++ G+LV + ++ +A+
Sbjct: 236 VYTVQSDVWSYGILLWEI----FSLGLNPYPGILVNSKFYKLVKDGYQMAQPA------- 284
Query: 761 YNHKELMRLIKLGIACTLSNPELRPSMRQILSIL 794
+ K + +++ AC P RP+ +QI S L
Sbjct: 285 FAPKNIYSIMQ---ACWALEPTHRPTFQQICSFL 315
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 114/224 (50%), Gaps = 30/224 (13%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
E LG+G FG+V+ + T VAVK L ++G F AE + L+H+ LVRL
Sbjct: 15 ERLGAGQFGEVWMGYY-NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYA- 71
Query: 177 CVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLE 236
V ++ + ++ +YM N SL L + P ++ + +I G+A ++ E+
Sbjct: 72 VVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMA----FIEER-- 124
Query: 237 TQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGG 296
IHR+++ +N+++ + ++ DFGLAR +E ++++ E +
Sbjct: 125 -NYIHRNLRAANILVSDTLSCKIADFGLARLIE-------------DNEYTAREGAKF-- 168
Query: 297 TIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
I + PE+ G+ T KSDV+SFGI++ E+V+ R + YP
Sbjct: 169 PIKWTAPEAINYGTF-TIKSDVWSFGILLTEIVTHGR---IPYP 208
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 18/204 (8%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGM-SKCPALRTRFSNELQNLARLRHRNLVQLCG 577
+R+ FG + G+ + H V VK L S P F E + +L+H+ LV+L
Sbjct: 15 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---DAFLAEANLMKQLQHQRLVRLYA 71
Query: 578 WCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWN 637
T++ + +I +Y L L I +I + ++ +A + ++ E
Sbjct: 72 VVTQE-PIYIITEYMENGSLVDFL-KTPSGIKLTI---NKLLDMAAQIAEGMAFIEER-- 124
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
IHRN+ ++ I + ++ ++ F LA + N++ R+ + + +PE
Sbjct: 125 -NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA------KFPIKWTAPEA 177
Query: 698 IESGEATSMADVYSFGVVVLEVVT 721
I G T +DV+SFG+++ E+VT
Sbjct: 178 INYGTFTIKSDVWSFGILLTEIVT 201
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 105/221 (47%), Gaps = 31/221 (14%)
Query: 116 DEVLGSGGFGKVY--RAVLPSDGTV-VAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
+ V+G+G FG+V R LP V VA+K L E+ + F E + H N+V
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
L G +++V ++M N +LD L + Q ++RG+AA + YL
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVI------QLVGMLRGIAAGMRYL 161
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
+ +HRD+ N++++S ++ DFGL+R +E + + A
Sbjct: 162 ADM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPE---------------AVY 203
Query: 292 TRIGGTIG--YLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
T GG I + PE+ Q +A SDV+S+GIV+ EV+S
Sbjct: 204 TTTGGKIPVRWTAPEAIQYRKFTSA-SDVWSYGIVMWEVMS 243
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 107/256 (41%), Gaps = 26/256 (10%)
Query: 540 VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSH 599
V +K L + R F E + + H N+V L G T ++++ ++ L
Sbjct: 74 VAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDA 133
Query: 600 LLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPR 659
L H +++Q +++ +A+ + YL + +HR++ + I ++ ++ +
Sbjct: 134 FL--RKHDGQFTVIQL---VGMLRGIAAGMRYLA---DMGYVHRDLAARNILVNSNLVCK 185
Query: 660 LGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEV 719
+ F L+ + + T G VR + +PE I+ + TS +DV+S+G+V+ EV
Sbjct: 186 VSDFGLSRVIEDDPEAVYTTTGGKIPVR----WTAPEAIQYRKFTSASDVWSYGIVMWEV 241
Query: 720 VTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLS 779
++ + + ++K + E P+ L +L + C
Sbjct: 242 MSYGERPYWDMSNQDVIKAIEEGYRLPAPMDCPAGLH--------------QLMLDCWQK 287
Query: 780 NPELRPSMRQILSILD 795
RP QI+ ILD
Sbjct: 288 ERAERPKFEQIVGILD 303
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 31/217 (14%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCL----AEKGERFEKTFAAELVAVAHLRHRNLVRLR 174
LG GG VY A VA+K + EK E K F E+ + L H+N+V +
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETL-KRFEREVHNSSQLSHQNIVSMI 77
Query: 175 GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQ 234
+D LV +Y+ +L E +E+ PL+ + + + + H+
Sbjct: 78 DVDEEDDCYYLVMEYIEGPTL-------SEYIESHGPLSVDTAINFTNQILDGIKHAHDM 130
Query: 235 LETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRI 294
+I+HRD+K N+++DS ++ DFG+A+ L + L +T +
Sbjct: 131 ---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALS---------------ETSLTQTNHV 172
Query: 295 GGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
GT+ Y PE KG +D++S GIV+ E++ G
Sbjct: 173 LGTVQYFSPEQ-AKGEATDECTDIYSIGIVLYEMLVG 208
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 81/187 (43%), Gaps = 17/187 (9%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQW 615
RF E+ N ++L H+N+V + E ++ +Y LS + H L
Sbjct: 57 RFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIE------SHGPLSV 110
Query: 616 HHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHG 675
N + I + H+ +++HR+I I +D + ++ F +A+ L+
Sbjct: 111 DTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET--- 164
Query: 676 HRKATSGNRSVRGIFGYMSPEYIESGEATS-MADVYSFGVVVLEVVTGQMAVDFRLPEGL 734
+ + V G Y SPE + GEAT D+YS G+V+ E++ G+ + +
Sbjct: 165 ---SLTQTNHVLGTVQYFSPEQAK-GEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI 220
Query: 735 LVKRVHE 741
+K + +
Sbjct: 221 AIKHIQD 227
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 137/335 (40%), Gaps = 71/335 (21%)
Query: 97 NPRIFSYAELYIGSNGFDEDEV----------LGSGGFGKVYRAVLPSDGTV-------V 139
NP FS A++Y+ DE EV LG G FG VY V + G V V
Sbjct: 5 NPEYFSAADVYVP----DEWEVAREKITMSRELGQGSFGMVYEGV--AKGVVKDEPETRV 58
Query: 140 AVKCLAEKGERFEKT-FAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRV 198
A+K + E E+ F E + ++VRL G L++ + M L
Sbjct: 59 AIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSY 118
Query: 199 LFR-RPE--NLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQY 255
L RPE N AP + + ++ +A + YL+ + +HRD+ N M+ +
Sbjct: 119 LRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDF 175
Query: 256 NARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLP-----PESFQKGS 310
++GDFG+ R + + R GG G LP PES + G
Sbjct: 176 TVKIGDFGMTR------------------DIYETDYYRKGGK-GLLPVRWMSPESLKDG- 215
Query: 311 VATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDG 370
V T SDV+SFG+V+ E+ + ++Q++ R EG +L DN D
Sbjct: 216 VFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL------RFVMEGGLLDKPDN-CPDM 268
Query: 371 SYKLCDMEXXXXXXXXXXXXNPHLRPSMKWVIEAV 405
++L M NP +RPS +I ++
Sbjct: 269 LFELMRM---------CWQYNPKMRPSFLEIISSI 294
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 128/307 (41%), Gaps = 40/307 (13%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFL------DNHQYVLVKRLGMSKCPALRTRFSNELQNL 564
A + S+ + + FG Y+G + V +K + + R F NE +
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 565 ARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLL------FHNNHRIGHSILQWHHR 618
++V+L G ++ LVI + L L NN + L
Sbjct: 83 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KM 140
Query: 619 YNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRK 678
+ +A + YL+ + +HR++ + + D ++G F + + D+ +RK
Sbjct: 141 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY-YRK 196
Query: 679 ATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKR 738
G VR +MSPE ++ G T+ +DV+SFGVV+ E+ T + + +GL ++
Sbjct: 197 GGKGLLPVR----WMSPESLKDGVFTTYSDVWSFGVVLWEIAT----LAEQPYQGLSNEQ 248
Query: 739 VHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGND 798
V F L+D N ELMR+ C NP++RPS +I+S +
Sbjct: 249 VLRFVME----GGLLDKPDNCPDMLFELMRM------CWQYNPKMRPSFLEIISSI---- 294
Query: 799 KRFMEDG 805
K ME G
Sbjct: 295 KEEMEPG 301
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 32/233 (13%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK--GERFEKTFAAELVAVAHLRHRNLVRLR 174
E +G+GGF KV A G +VA+K + + G + E+ A+ +LRH+++ +L
Sbjct: 16 ETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPR-IKTEIEALKNLRHQHICQLY 74
Query: 175 GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQ 234
+++ +V +Y P L + + L+ E+ + + R + +A+ Y+H Q
Sbjct: 75 HVLETANKIFMVLEYCPGGELFDYIISQDR-------LSEEETRVVFRQIVSAVAYVHSQ 127
Query: 235 LETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRI 294
HRD+K N++ D + +L DFGL N +HL
Sbjct: 128 ---GYAHRDLKPENLLFDEYHKLKLIDFGLC------------AKPKGNKDYHLQTCC-- 170
Query: 295 GGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
G++ Y PE Q S +++DV+S GI++ ++ G L + DD ++ L
Sbjct: 171 -GSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGF----LPFDDDNVMAL 218
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 120/251 (47%), Gaps = 35/251 (13%)
Query: 97 NPRIFSYAELY-IGSNGFDEDEVLGSGGFGKVYRAV---LPSDGTV--VAVKCLAEKGER 150
+P Y E + N + LG+G FGKV A L + V VAVK L
Sbjct: 31 DPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA 90
Query: 151 FEK-TFAAELVAVAHL-RHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFR-RPENLE 207
EK +EL ++HL +H N+V L G C H +L++ +Y L L R RP LE
Sbjct: 91 DEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLE 150
Query: 208 AA-APLNWEQRKKIIRGL-------AAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARL 259
+ P + + + R L A + +L + IHRDV NV+L + + A++
Sbjct: 151 YSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKI 207
Query: 260 GDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVF 319
GDFGLAR + ++ Y ++ ++ R+ + ++ PES V T +SDV+
Sbjct: 208 GDFGLARDIMNDSNYIVKGNA------------RL--PVKWMAPESIFD-CVYTVQSDVW 252
Query: 320 SFGIVVLEVVS 330
S+GI++ E+ S
Sbjct: 253 SYGILLWEIFS 263
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 112/267 (41%), Gaps = 34/267 (12%)
Query: 540 VLVKRLGMSKCPALRTRFSNELQNLARL-RHRNLVQLCGWCTEQGEMLVIYDYSATRILS 598
V VK L + + +EL+ ++ L +H N+V L G CT G +LVI +Y L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 599 HLL----------FHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSS 648
+ L +N L + +A + +L ++ IHR++ +
Sbjct: 139 NFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLA---SKNCIHRDVAAR 195
Query: 649 AITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMAD 708
+ L ++G F LA + ND + GN R +M+PE I T +D
Sbjct: 196 NVLLTNGHVAKIGDFGLARDIM-NDSNY--IVKGN--ARLPVKWMAPESIFDCVYTVQSD 250
Query: 709 VYSFGVVVLEVVTGQMAVDFRLPEGLLVK-RVHEFEARKRPLAELVDLSLNGEYNHKELM 767
V+S+G+++ E+ ++ G+LV + ++ +A+ + K +
Sbjct: 251 VWSYGILLWEI----FSLGLNPYPGILVNSKFYKLVKDGYQMAQPA-------FAPKNIY 299
Query: 768 RLIKLGIACTLSNPELRPSMRQILSIL 794
+++ AC P RP+ +QI S L
Sbjct: 300 SIMQ---ACWALEPTHRPTFQQICSFL 323
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 119/245 (48%), Gaps = 34/245 (13%)
Query: 110 SNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAA-ELVAVAHLRHR 168
S+ F + E LG+G + VY+ + + G VA+K + E + A E+ + L+H
Sbjct: 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHE 63
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPN---RSLD-RVLFRRPENLEA--AAPLNWEQRKKIIR 222
N+VRL E++L LV+++M N + +D R + P LE W+ +++
Sbjct: 64 NIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQ----LLQ 119
Query: 223 GLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSAR 282
GLA + HE +I+HRD+K N++++ + +LGDFGLAR + T S
Sbjct: 120 GLA----FCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLAR----AFGIPVNTFS-- 166
Query: 283 NHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDD 342
+E T+ Y P+ + D++S G ++ E+++G+ T ++
Sbjct: 167 ------SEVV----TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE 216
Query: 343 QIILL 347
Q+ L+
Sbjct: 217 QLKLI 221
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/223 (17%), Positives = 102/223 (45%), Gaps = 25/223 (11%)
Query: 509 ISATNNFSESQRVAEMDFGTAYQGFLDNHQ-YVLVKRLGMSKCPALRTRFSNELQNLARL 567
+S+++ F + +++ + T Y+G YV +K + + + E+ + L
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL 60
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSI------LQWHHRYNI 621
+H N+V+L + ++ +++++ + ++ ++ +G++ L + ++ +
Sbjct: 61 KHENIVRLYDVIHTENKLTLVFEFMDNDLKKYM---DSRTVGNTPRGLELNLVKYFQWQL 117
Query: 622 IKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATS 681
++ LA + HE +++HR++ + ++ +LG F LA G T
Sbjct: 118 LQGLA----FCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAF-----GIPVNTF 165
Query: 682 GNRSVRGIFGYMSPEYIESGEATSMA-DVYSFGVVVLEVVTGQ 723
+ V Y +P+ + S + D++S G ++ E++TG+
Sbjct: 166 SSEVV--TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 137/335 (40%), Gaps = 71/335 (21%)
Query: 97 NPRIFSYAELYIGSNGFDEDEV----------LGSGGFGKVYRAVLPSDGTV-------V 139
NP FS A++Y+ DE EV LG G FG VY V + G V V
Sbjct: 27 NPEYFSAADVYVP----DEWEVAREKITMSRELGQGSFGMVYEGV--AKGVVKDEPETRV 80
Query: 140 AVKCLAEKGERFEKT-FAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRV 198
A+K + E E+ F E + ++VRL G L++ + M L
Sbjct: 81 AIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSY 140
Query: 199 LFR-RPE--NLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQY 255
L RPE N AP + + ++ +A + YL+ + +HRD+ N M+ +
Sbjct: 141 LRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDF 197
Query: 256 NARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLP-----PESFQKGS 310
++GDFG+ R + + R GG G LP PES + G
Sbjct: 198 TVKIGDFGMTR------------------DIYETDYYRKGGK-GLLPVRWMSPESLKDG- 237
Query: 311 VATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDG 370
V T SDV+SFG+V+ E+ + ++Q++ R EG +L DN D
Sbjct: 238 VFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL------RFVMEGGLLDKPDN-CPDM 290
Query: 371 SYKLCDMEXXXXXXXXXXXXNPHLRPSMKWVIEAV 405
++L M NP +RPS +I ++
Sbjct: 291 LFELMRM---------CWQYNPKMRPSFLEIISSI 316
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 128/307 (41%), Gaps = 40/307 (13%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFL------DNHQYVLVKRLGMSKCPALRTRFSNELQNL 564
A + S+ + + FG Y+G + V +K + + R F NE +
Sbjct: 45 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 104
Query: 565 ARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLL------FHNNHRIGHSILQWHHR 618
++V+L G ++ LVI + L L NN + L
Sbjct: 105 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KM 162
Query: 619 YNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRK 678
+ +A + YL+ + +HR++ + + D ++G F + + D+ +RK
Sbjct: 163 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY-YRK 218
Query: 679 ATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKR 738
G VR +MSPE ++ G T+ +DV+SFGVV+ E+ T + + +GL ++
Sbjct: 219 GGKGLLPVR----WMSPESLKDGVFTTYSDVWSFGVVLWEIAT----LAEQPYQGLSNEQ 270
Query: 739 VHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGND 798
V F L+D N ELMR+ C NP++RPS +I+S +
Sbjct: 271 VLRFVME----GGLLDKPDNCPDMLFELMRM------CWQYNPKMRPSFLEIISSI---- 316
Query: 799 KRFMEDG 805
K ME G
Sbjct: 317 KEEMEPG 323
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 41/228 (17%)
Query: 119 LGSGGFGKVYR---AVLPSDGTV--VAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVR 172
LG G FG+VY + +P+D + VAVK L E E+ E F E + ++ H+N+VR
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 173 LRGWCVHEDQLLLVYDYMPN---RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
G + ++ + M +S R RP + A L+ + R +A
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH---VARDIACGCQ 181
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYN---ARLGDFGLARWLEHELQYQMRTSSARNHQF 286
YL E IHRD+ N +L A++GDFG+AR
Sbjct: 182 YLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------------------DI 220
Query: 287 HLAETTRIGGT----IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ A R GG + ++PPE+F +G + T+K+D +SFG+++ E+ S
Sbjct: 221 YRASYYRKGGCAMLPVKWMPPEAFMEG-IFTSKTDTWSFGVLLWEIFS 267
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 68/162 (41%), Gaps = 12/162 (7%)
Query: 564 LARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGH-SILQWHHRYNII 622
+++ H+N+V+ G + ++ + A L L R S L ++
Sbjct: 114 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 173
Query: 623 KSLASAILYLHEEWNEQVIHRNITSSAITLD---PDMNPRLGSFALAEFLTRNDHGHRKA 679
+ +A YL E IHR+I + L P ++G F +A + R + +RK
Sbjct: 174 RDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY-YRKG 229
Query: 680 TSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
V+ +M PE G TS D +SFGV++ E+ +
Sbjct: 230 GCAMLPVK----WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 41/228 (17%)
Query: 119 LGSGGFGKVYR---AVLPSDGTV--VAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVR 172
LG G FG+VY + +P+D + VAVK L E E+ E F E + ++ H+N+VR
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 173 LRGWCVHEDQLLLVYDYMPN---RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
G + ++ + M +S R RP + A L+ + R +A
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH---VARDIACGCQ 171
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYN---ARLGDFGLARWLEHELQYQMRTSSARNHQF 286
YL E IHRD+ N +L A++GDFG+AR
Sbjct: 172 YLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------------------DI 210
Query: 287 HLAETTRIGGT----IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ A R GG + ++PPE+F +G + T+K+D +SFG+++ E+ S
Sbjct: 211 YRASYYRKGGCAMLPVKWMPPEAFMEG-IFTSKTDTWSFGVLLWEIFS 257
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 12/169 (7%)
Query: 557 FSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGH-SILQW 615
F E +++ H+N+V+ G + ++ + A L L R S L
Sbjct: 97 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 156
Query: 616 HHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLD---PDMNPRLGSFALAEFLTRN 672
++ + +A YL E IHR+I + L P ++G F +A + R
Sbjct: 157 LDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 213
Query: 673 DHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
+ +RK V+ +M PE G TS D +SFGV++ E+ +
Sbjct: 214 SY-YRKGGCAMLPVK----WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 41/228 (17%)
Query: 119 LGSGGFGKVYR---AVLPSDGTV--VAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVR 172
LG G FG+VY + +P+D + VAVK L E E+ E F E + ++ H+N+VR
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 173 LRGWCVHEDQLLLVYDYMPN---RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
G + ++ + M +S R RP + A L+ + R +A
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH---VARDIACGCQ 161
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYN---ARLGDFGLARWLEHELQYQMRTSSARNHQF 286
YL E IHRD+ N +L A++GDFG+AR
Sbjct: 162 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------------------DI 200
Query: 287 HLAETTRIGGT----IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ A R GG + ++PPE+F +G + T+K+D +SFG+++ E+ S
Sbjct: 201 YRASYYRKGGCAMLPVKWMPPEAFMEG-IFTSKTDTWSFGVLLWEIFS 247
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 12/169 (7%)
Query: 557 FSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGH-SILQW 615
F E +++ H+N+V+ G + ++ + A L L R S L
Sbjct: 87 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 146
Query: 616 HHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLD---PDMNPRLGSFALAEFLTRN 672
++ + +A YL E IHR+I + L P ++G F +A + R
Sbjct: 147 LDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 203
Query: 673 DHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
+ +RK V+ +M PE G TS D +SFGV++ E+ +
Sbjct: 204 SY-YRKGGCAMLPVK----WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 41/228 (17%)
Query: 119 LGSGGFGKVYR---AVLPSDGTV--VAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVR 172
LG G FG+VY + +P+D + VAVK L E E+ E F E + ++ H+N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 173 LRGWCVHEDQLLLVYDYMPN---RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
G + ++ + M +S R RP + A L+ + R +A
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH---VARDIACGCQ 154
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYN---ARLGDFGLARWLEHELQYQMRTSSARNHQF 286
YL E IHRD+ N +L A++GDFG+AR
Sbjct: 155 YLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------------------DI 193
Query: 287 HLAETTRIGGT----IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ A R GG + ++PPE+F +G + T+K+D +SFG+++ E+ S
Sbjct: 194 YRASYYRKGGCAMLPVKWMPPEAFMEG-IFTSKTDTWSFGVLLWEIFS 240
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 12/169 (7%)
Query: 557 FSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGH-SILQW 615
F E +++ H+N+V+ G + ++ + A L L R S L
Sbjct: 80 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAM 139
Query: 616 HHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLD---PDMNPRLGSFALAEFLTRN 672
++ + +A YL E IHR+I + L P ++G F +A + R
Sbjct: 140 LDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 196
Query: 673 DHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
+ +RK V+ +M PE G TS D +SFGV++ E+ +
Sbjct: 197 SY-YRKGGCAMLPVK----WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 41/228 (17%)
Query: 119 LGSGGFGKVYR---AVLPSDGTV--VAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVR 172
LG G FG+VY + +P+D + VAVK L E E+ E F E + ++ H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 173 LRGWCVHEDQLLLVYDYMPN---RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
G + ++ + M +S R RP + A L+ + R +A
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH---VARDIACGCQ 155
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYN---ARLGDFGLARWLEHELQYQMRTSSARNHQF 286
YL E IHRD+ N +L A++GDFG+AR
Sbjct: 156 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------------------DI 194
Query: 287 HLAETTRIGGT----IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ A R GG + ++PPE+F +G + T+K+D +SFG+++ E+ S
Sbjct: 195 YRASYYRKGGCAMLPVKWMPPEAFMEG-IFTSKTDTWSFGVLLWEIFS 241
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 12/169 (7%)
Query: 557 FSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGH-SILQW 615
F E +++ H+N+V+ G + ++ + A L L R S L
Sbjct: 81 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 140
Query: 616 HHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLD---PDMNPRLGSFALAEFLTRN 672
++ + +A YL E IHR+I + L P ++G F +A + R
Sbjct: 141 LDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 197
Query: 673 DHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
+ +RK V+ +M PE G TS D +SFGV++ E+ +
Sbjct: 198 SY-YRKGGCAMLPVK----WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 108/235 (45%), Gaps = 41/235 (17%)
Query: 119 LGSGGFGKVYRA----VLPSDG-TVVAVKCLAEKGER-FEKTFAAELVAVAHLRHRNLVR 172
+G G FG+V++A +LP + T+VAVK L E+ + F E +A + N+V+
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 173 LRGWCVHEDQLLLVYDYMPNRSLDRVL-----------------FRRPENLEAAAPLNWE 215
L G C + L+++YM L+ L R + PL+
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 216 QRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQ 275
++ I R +AA + YL E+ + +HRD+ T N ++ ++ DFGL+R + Y+
Sbjct: 175 EQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 276 MRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ A I ++PPES T +SDV+++G+V+ E+ S
Sbjct: 232 ADGNDAI--------------PIRWMPPESIFYNRY-TTESDVWAYGVVLWEIFS 271
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 98/233 (42%), Gaps = 32/233 (13%)
Query: 513 NNFSESQRVAEMDFGTAYQ----GFLDNHQY--VLVKRLGMSKCPALRTRFSNELQNLAR 566
NN + + E FG +Q G L + V VK L ++ F E +A
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 567 LRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLL----FHNNHRIGHSILQWHHRYN-- 620
+ N+V+L G C M ++++Y A L+ L H + HS L R +
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 621 ------------IIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEF 668
I + +A+ + YL E + +HR++ + + +M ++ F L+
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 669 LTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
+ D+ GN ++ +M PE I T+ +DV+++GVV+ E+ +
Sbjct: 224 IYSADY---YKADGNDAIP--IRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 29/220 (13%)
Query: 116 DEVLGSGGFGKVYRAVLPSDG---TVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
++V+G G FG+V L G VA+K L A ++ + F +E + H N++
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
L G ++++ +YM N SLD L + Q ++RG+ + + YL
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI------QLVGMLRGIGSGMKYL 126
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
+ +HRD+ N++++S ++ DFG++R LE + + A T
Sbjct: 127 SDM---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPE--------------AAYT 169
Query: 292 TRIGGT-IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
TR G I + PE+ +A SDV+S+GIV+ EV+S
Sbjct: 170 TRGGKIPIRWTAPEAIAYRKFTSA-SDVWSYGIVMWEVMS 208
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 85/182 (46%), Gaps = 12/182 (6%)
Query: 540 VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSH 599
V +K L R F +E + + H N++ L G T+ +++I +Y L
Sbjct: 39 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 98
Query: 600 LLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPR 659
L N+ R +++Q +++ + S + YL + +HR++ + I ++ ++ +
Sbjct: 99 FLRKNDGRF--TVIQL---VGMLRGIGSGMKYLSDM---SYVHRDLAARNILVNSNLVCK 150
Query: 660 LGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEV 719
+ F ++ L + G +R + +PE I + TS +DV+S+G+V+ EV
Sbjct: 151 VSDFGMSRVLEDDPEAAYTTRGGKIPIR----WTAPEAIAYRKFTSASDVWSYGIVMWEV 206
Query: 720 VT 721
++
Sbjct: 207 MS 208
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 41/228 (17%)
Query: 119 LGSGGFGKVYR---AVLPSDGTV--VAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVR 172
LG G FG+VY + +P+D + VAVK L E E+ E F E + ++ H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 173 LRGWCVHEDQLLLVYDYMPN---RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
G + ++ + M +S R RP + A L+ + R +A
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH---VARDIACGCQ 169
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYN---ARLGDFGLARWLEHELQYQMRTSSARNHQF 286
YL E IHRD+ N +L A++GDFG+AR
Sbjct: 170 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------------------DI 208
Query: 287 HLAETTRIGGT----IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ A R GG + ++PPE+F +G + T+K+D +SFG+++ E+ S
Sbjct: 209 YRASYYRKGGCAMLPVKWMPPEAFMEG-IFTSKTDTWSFGVLLWEIFS 255
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 12/169 (7%)
Query: 557 FSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGH-SILQW 615
F E +++ H+N+V+ G + ++ + A L L R S L
Sbjct: 95 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 616 HHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLD---PDMNPRLGSFALAEFLTRN 672
++ + +A YL E IHR+I + L P ++G F +A + R
Sbjct: 155 LDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 211
Query: 673 DHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
+ +RK V+ +M PE G TS D +SFGV++ E+ +
Sbjct: 212 SY-YRKGGCAMLPVK----WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 41/228 (17%)
Query: 119 LGSGGFGKVYR---AVLPSDGTV--VAVKCLAE-KGERFEKTFAAELVAVAHLRHRNLVR 172
LG G FG+VY + +P+D + VAVK L E E+ E F E + ++ H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 173 LRGWCVHEDQLLLVYDYMPN---RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
G + ++ + M +S R RP + A L+ + R +A
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH---VARDIACGCQ 169
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYN---ARLGDFGLARWLEHELQYQMRTSSARNHQF 286
YL E IHRD+ N +L A++GDFG+AR
Sbjct: 170 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------------------DI 208
Query: 287 HLAETTRIGGT----IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ A R GG + ++PPE+F +G + T+K+D +SFG+++ E+ S
Sbjct: 209 YRASYYRKGGCAMLPVKWMPPEAFMEG-IFTSKTDTWSFGVLLWEIFS 255
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 12/169 (7%)
Query: 557 FSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGH-SILQW 615
F E +++ H+N+V+ G + ++ + A L L R S L
Sbjct: 95 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 616 HHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLD---PDMNPRLGSFALAEFLTRN 672
++ + +A YL E IHR+I + L P ++G F +A + R
Sbjct: 155 LDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 211
Query: 673 DHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
+ +RK V+ +M PE G TS D +SFGV++ E+ +
Sbjct: 212 SY-YRKGGCAMLPVK----WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 109/241 (45%), Gaps = 49/241 (20%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVR 172
F E E++GSGGFG+V++A DG ++ + E+ E+ E+ A+A L H N+V
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER----EVKALAKLDHVNIVH 69
Query: 173 LRG-WCVHE------DQLLLVYDYMP------NRSLDRVLFRRPENLEAAAPLNWEQRKK 219
G W + D L DY P +RS + LF + E + W ++++
Sbjct: 70 YNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR 129
Query: 220 -----------IIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWL 268
+ + + Y+H + ++IHRD+K SN+ L ++GDFGL L
Sbjct: 130 GEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSL 186
Query: 269 EHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEV 328
+++ + TR GT+ Y+ PE + D+++ G+++ E+
Sbjct: 187 KND-----------------GKRTRSKGTLRYMSPEQISSQDYG-KEVDLYALGLILAEL 228
Query: 329 V 329
+
Sbjct: 229 L 229
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 124/308 (40%), Gaps = 64/308 (20%)
Query: 514 NFSESQRVAEMDFGTAYQGF--LDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRN 571
+F E + + FG ++ +D YV ++R+ + A R E++ LA+L H N
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYV-IRRVKYNNEKAER-----EVKALAKLDHVN 66
Query: 572 LVQLCG-W------CTEQGEMLVIYDY------SATRILSHLLFHNNHRIGHSIL-QWHH 617
+V G W + L DY +++R + LF L QW
Sbjct: 67 IVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIE 126
Query: 618 R-----------YNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALA 666
+ + + + + Y+H ++++IHR++ S I L ++G F L
Sbjct: 127 KRRGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLV 183
Query: 667 EFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAV 726
L +ND G R + +G YMSPE I S + D+Y+ G+++ E
Sbjct: 184 TSL-KND-GKRTRS------KGTLRYMSPEQISSQDYGKEVDLYALGLILAE-------- 227
Query: 727 DFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPS 786
LL FE K +L D ++ ++ KE L KL PE RP+
Sbjct: 228 -------LLHVCDTAFETSKF-FTDLRDGIISDIFDKKEKTLLQKL----LSKKPEDRPN 275
Query: 787 MRQILSIL 794
+IL L
Sbjct: 276 TSEILRTL 283
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 41/228 (17%)
Query: 119 LGSGGFGKVYR---AVLPSDGTV--VAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVR 172
LG G FG+VY + +P+D + VAVK L E E+ E F E + ++ H+N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 173 LRGWCVHEDQLLLVYDYMPN---RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
G + ++ + M +S R RP + A L+ + R +A
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH---VARDIACGCQ 154
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYN---ARLGDFGLARWLEHELQYQMRTSSARNHQF 286
YL E IHRD+ N +L A++GDFG+AR
Sbjct: 155 YLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------------------DI 193
Query: 287 HLAETTRIGGT----IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ A R GG + ++PPE+F +G + T+K+D +SFG+++ E+ S
Sbjct: 194 YRASYYRKGGCAMLPVKWMPPEAFMEG-IFTSKTDTWSFGVLLWEIFS 240
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 12/169 (7%)
Query: 557 FSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGH-SILQW 615
F E +++ H+N+V+ G + ++ + A L L R S L
Sbjct: 80 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 139
Query: 616 HHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLD---PDMNPRLGSFALAEFLTRN 672
++ + +A YL E IHR+I + L P ++G F +A + R
Sbjct: 140 LDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 196
Query: 673 DHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
+ +RK V+ +M PE G TS D +SFGV++ E+ +
Sbjct: 197 SY-YRKGGCAMLPVK----WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 41/228 (17%)
Query: 119 LGSGGFGKVYR---AVLPSDGTV--VAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVR 172
LG G FG+VY + +P+D + VAVK L E E+ E F E + ++ H+N+VR
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 173 LRGWCVHEDQLLLVYDYMPN---RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
G + ++ + M +S R RP + A L+ + R +A
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH---VARDIACGCQ 146
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYN---ARLGDFGLARWLEHELQYQMRTSSARNHQF 286
YL E IHRD+ N +L A++GDFG+AR
Sbjct: 147 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------------------DI 185
Query: 287 HLAETTRIGGT----IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ A R GG + ++PPE+F +G + T+K+D +SFG+++ E+ S
Sbjct: 186 YRASYYRKGGCAMLPVKWMPPEAFMEG-IFTSKTDTWSFGVLLWEIFS 232
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 12/169 (7%)
Query: 557 FSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGH-SILQW 615
F E +++ H+N+V+ G + ++ + A L L R S L
Sbjct: 72 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 131
Query: 616 HHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLD---PDMNPRLGSFALAEFLTRN 672
++ + +A YL E IHR+I + L P ++G F +A + R
Sbjct: 132 LDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 188
Query: 673 DHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
+ +RK V+ +M PE G TS D +SFGV++ E+ +
Sbjct: 189 SY-YRKGGCAMLPVK----WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 29/220 (13%)
Query: 116 DEVLGSGGFGKVYRAVLPSDG---TVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
++V+G G FG+V L G VA+K L A ++ + F +E + H N++
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
L G ++++ +YM N SLD L + Q ++RG+ + + YL
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI------QLVGMLRGIGSGMKYL 132
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
+ +HRD+ N++++S ++ DFG++R LE + + A T
Sbjct: 133 SDM---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPE--------------AAYT 175
Query: 292 TRIGGT-IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
TR G I + PE+ +A SDV+S+GIV+ EV+S
Sbjct: 176 TRGGKIPIRWTAPEAIAYRKFTSA-SDVWSYGIVMWEVMS 214
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 85/182 (46%), Gaps = 12/182 (6%)
Query: 540 VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSH 599
V +K L R F +E + + H N++ L G T+ +++I +Y L
Sbjct: 45 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 104
Query: 600 LLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPR 659
L N+ R +++Q +++ + S + YL + +HR++ + I ++ ++ +
Sbjct: 105 FLRKNDGRF--TVIQL---VGMLRGIGSGMKYLSDM---SYVHRDLAARNILVNSNLVCK 156
Query: 660 LGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEV 719
+ F ++ L + G +R + +PE I + TS +DV+S+G+V+ EV
Sbjct: 157 VSDFGMSRVLEDDPEAAYTTRGGKIPIR----WTAPEAIAYRKFTSASDVWSYGIVMWEV 212
Query: 720 VT 721
++
Sbjct: 213 MS 214
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 32/224 (14%)
Query: 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRH 167
+ F+ LG G FG VY A +VA+K L + + E E E+ AHL H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
N++RL + ++ L+ +Y P L + L+ + + ++ I+ LA A
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYK-------ELQKSCTFDEQRTATIMEELADA 135
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y H + ++IHRD+K N++L + ++ DFG W H + +T
Sbjct: 136 LMYCHGK---KVIHRDIKPENLLLGLKGELKIADFG---WSVHAPSLRRKT--------- 180
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
+ GT+ YLPPE + G + K D++ G++ E++ G
Sbjct: 181 ------MCGTLDYLPPEMIE-GRMHNEKVDLWCIGVLCYELLVG 217
Score = 36.2 bits (82), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 87/213 (40%), Gaps = 21/213 (9%)
Query: 513 NNFSESQRVAEMDFGTAYQGF-LDNHQYVLVKRLGMSKCP--ALRTRFSNELQNLARLRH 569
++F + + + FG Y +H V +K L S+ + + E++ A L H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 570 RNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAI 629
N+++L + ++ + +I +Y+ L L + I++ LA A+
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKS------CTFDEQRTATIMEELADAL 136
Query: 630 LYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGI 689
+Y H ++VIHR+I + L ++ F + + +++ G
Sbjct: 137 MYCH---GKKVIHRDIKPENLLLGLKGELKIADFGWSV---------HAPSLRRKTMCGT 184
Query: 690 FGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
Y+ PE IE D++ GV+ E++ G
Sbjct: 185 LDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 102/217 (47%), Gaps = 25/217 (11%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWC 177
VLG G +G VY S+ +A+K + E+ R+ + E+ HL+H+N+V+ G
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 178 VHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLET 237
+ + + +P SL +L + L+ K+I+ G L YLH +
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEG----LKYLH---DN 141
Query: 238 QIIHRDVKTSNVMLDSQYNA-RLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGG 296
QI+HRD+K NV++++ ++ DFG ++ L + N T G
Sbjct: 142 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRL-----------AGIN-----PCTETFTG 185
Query: 297 TIGYLPPESFQKGSVATAK-SDVFSFGIVVLEVVSGR 332
T+ Y+ PE KG K +D++S G ++E+ +G+
Sbjct: 186 TLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 44/215 (20%)
Query: 526 FGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNEL-QNLA---RLRHRNLVQLCGWCTE 581
+G Y G ++Q R+ + + P +R+S L + +A L+H+N+VQ G +E
Sbjct: 35 YGIVYAGRDLSNQV----RIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSE 90
Query: 582 QGEMLVIYDYSATRILSHL-------LFHNNHRIGHSILQWHHRYNIIKSLASAILYLHE 634
G + + + LS L L N IG K + + YLH
Sbjct: 91 NGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGF----------YTKQILEGLKYLH- 139
Query: 635 EWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSG----NRSVRGIF 690
+ Q++HR+I + ++ + L +D G K +G + G
Sbjct: 140 --DNQIVHRDIKGDNVLIN----------TYSGVLKISDFGTSKRLAGINPCTETFTGTL 187
Query: 691 GYMSPEYIESGE--ATSMADVYSFGVVVLEVVTGQ 723
YM+PE I+ G AD++S G ++E+ TG+
Sbjct: 188 QYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 29/220 (13%)
Query: 116 DEVLGSGGFGKVYRAVLPSDG---TVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
++V+G G FG+V L G VA+K L A ++ + F +E + H N++
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 93
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
L G ++++ +YM N SLD L + Q ++RG+ + + YL
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI------QLVGMLRGIGSGMKYL 147
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
+ +HRD+ N++++S ++ DFG++R LE + + A T
Sbjct: 148 SDM---SAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPE--------------AAYT 190
Query: 292 TRIGGT-IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
TR G I + PE+ +A SDV+S+GIV+ EV+S
Sbjct: 191 TRGGKIPIRWTAPEAIAYRKFTSA-SDVWSYGIVMWEVMS 229
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 85/182 (46%), Gaps = 12/182 (6%)
Query: 540 VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSH 599
V +K L R F +E + + H N++ L G T+ +++I +Y L
Sbjct: 60 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 119
Query: 600 LLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPR 659
L N+ R +++Q +++ + S + YL + +HR++ + I ++ ++ +
Sbjct: 120 FLRKNDGRF--TVIQL---VGMLRGIGSGMKYLSDM---SAVHRDLAARNILVNSNLVCK 171
Query: 660 LGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEV 719
+ F ++ L + G +R + +PE I + TS +DV+S+G+V+ EV
Sbjct: 172 VSDFGMSRVLEDDPEAAYTTRGGKIPIR----WTAPEAIAYRKFTSASDVWSYGIVMWEV 227
Query: 720 VT 721
++
Sbjct: 228 MS 229
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 102/217 (47%), Gaps = 25/217 (11%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWC 177
VLG G +G VY S+ +A+K + E+ R+ + E+ HL+H+N+V+ G
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 178 VHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLET 237
+ + + +P SL +L + L+ K+I+ G L YLH +
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEG----LKYLH---DN 127
Query: 238 QIIHRDVKTSNVMLDSQYNA-RLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGG 296
QI+HRD+K NV++++ ++ DFG ++ L + N T G
Sbjct: 128 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRL-----------AGIN-----PCTETFTG 171
Query: 297 TIGYLPPESFQKGSVATAK-SDVFSFGIVVLEVVSGR 332
T+ Y+ PE KG K +D++S G ++E+ +G+
Sbjct: 172 TLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 83/197 (42%), Gaps = 40/197 (20%)
Query: 544 RLGMSKCPALRTRFSNEL-QNLA---RLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSH 599
R+ + + P +R+S L + +A L+H+N+VQ G +E G + + + LS
Sbjct: 35 RIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSA 94
Query: 600 L-------LFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITL 652
L L N IG K + + YLH + Q++HR+I + +
Sbjct: 95 LLRSKWGPLKDNEQTIGF----------YTKQILEGLKYLH---DNQIVHRDIKGDNVLI 141
Query: 653 DPDMNPRLGSFALAEFLTRNDHGHRKATSG----NRSVRGIFGYMSPEYIESGE--ATSM 706
+ + L +D G K +G + G YM+PE I+ G
Sbjct: 142 N----------TYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKA 191
Query: 707 ADVYSFGVVVLEVVTGQ 723
AD++S G ++E+ TG+
Sbjct: 192 ADIWSLGCTIIEMATGK 208
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 107/263 (40%), Gaps = 61/263 (23%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVK----CLAEKGERFEKT-------------FAAELV 160
L G F K+ + D A+K L EK F K+ F EL
Sbjct: 38 TLNQGKFNKI--ILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQ 95
Query: 161 AVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSL---DRVLFRRPENLEAAAPLNWEQR 217
+ +++ + G + D++ ++Y+YM N S+ D F +N P+ +
Sbjct: 96 IITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPI--QVI 153
Query: 218 KKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMR 277
K II+ + + Y+H E I HRDVK SN+++D +L DFG E E +
Sbjct: 154 KCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFG-----ESEYMVDKK 206
Query: 278 TSSARNHQFHLAETTRIGGTIGYLPPESF-QKGSVATAKSDVFSFGIV------------ 324
+R GT ++PPE F + S AK D++S GI
Sbjct: 207 IKGSR-------------GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFS 253
Query: 325 ----VLEVVSGRRAVDLTYPDDQ 343
++E+ + R ++ YP D+
Sbjct: 254 LKISLVELFNNIRTKNIEYPLDR 276
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 19/166 (11%)
Query: 557 FSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY----SATRILSHLLFHNNHRIGHSI 612
F NELQ + +++ + G T E+ +IY+Y S + + + +
Sbjct: 90 FKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIP 149
Query: 613 LQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRN 672
+Q IIKS+ ++ Y+H E N + HR++ S I +D + +L F +E++
Sbjct: 150 IQVIKC--IIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGESEYMV-- 203
Query: 673 DHGHRKATSGNRSVRGIFGYMSPEYI--ESGEATSMADVYSFGVVV 716
K G+ RG + +M PE+ ES + D++S G+ +
Sbjct: 204 ----DKKIKGS---RGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 41/228 (17%)
Query: 119 LGSGGFGKVYR---AVLPSDGTV--VAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVR 172
LG G FG+VY + +P+D + VAVK L E E+ E F E + ++ H+N+VR
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 173 LRGWCVHEDQLLLVYDYMPN---RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
G + ++ + M +S R RP + A L+ + R +A
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH---VARDIACGCQ 172
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYN---ARLGDFGLARWLEHELQYQMRTSSARNHQF 286
YL E IHRD+ N +L A++GDFG+AR
Sbjct: 173 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------------------DI 211
Query: 287 HLAETTRIGGT----IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ A R GG + ++PPE+F +G + T+K+D +SFG+++ E+ S
Sbjct: 212 YRAGYYRKGGCAMLPVKWMPPEAFMEG-IFTSKTDTWSFGVLLWEIFS 258
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 12/169 (7%)
Query: 557 FSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGH-SILQW 615
F E +++ H+N+V+ G + ++ + A L L R S L
Sbjct: 98 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 157
Query: 616 HHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLD---PDMNPRLGSFALAEFLTRN 672
++ + +A YL E IHR+I + L P ++G F +A + R
Sbjct: 158 LDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 214
Query: 673 DHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
+ +RK V+ +M PE G TS D +SFGV++ E+ +
Sbjct: 215 GY-YRKGGCAMLPVK----WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 41/228 (17%)
Query: 119 LGSGGFGKVYR---AVLPSDGTV--VAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVR 172
LG G FG+VY + +P+D + VAVK L E E+ E F E + ++ H+N+VR
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 173 LRGWCVHEDQLLLVYDYMPN---RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
G + ++ + M +S R RP + A L+ + R +A
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH---VARDIACGCQ 195
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYN---ARLGDFGLARWLEHELQYQMRTSSARNHQF 286
YL E IHRD+ N +L A++GDFG+AR
Sbjct: 196 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR------------------DI 234
Query: 287 HLAETTRIGGT----IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ A R GG + ++PPE+F +G + T+K+D +SFG+++ E+ S
Sbjct: 235 YRAGYYRKGGCAMLPVKWMPPEAFMEG-IFTSKTDTWSFGVLLWEIFS 281
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 68/162 (41%), Gaps = 12/162 (7%)
Query: 564 LARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGH-SILQWHHRYNII 622
+++ H+N+V+ G + ++ + A L L R S L ++
Sbjct: 128 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 187
Query: 623 KSLASAILYLHEEWNEQVIHRNITSSAITLD---PDMNPRLGSFALAEFLTRNDHGHRKA 679
+ +A YL E IHR+I + L P ++G F +A + R + +RK
Sbjct: 188 RDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGY-YRKG 243
Query: 680 TSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
V+ +M PE G TS D +SFGV++ E+ +
Sbjct: 244 GCAMLPVK----WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 111/227 (48%), Gaps = 36/227 (15%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
E LG+G G+V+ + T VAVK L ++G F AE + L+H+ LVRL
Sbjct: 19 ERLGAGQAGEVWMGYY-NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYA- 75
Query: 177 CVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLE 236
V ++ + ++ +YM N SL L + P ++ + +I G+A ++ E+
Sbjct: 76 VVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMA----FIEER-- 128
Query: 237 TQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGG 296
IHRD++ +N+++ + ++ DFGLAR +E AE T G
Sbjct: 129 -NYIHRDLRAANILVSDTLSCKIADFGLARLIED------------------AEXTAREG 169
Query: 297 T---IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
I + PE+ G+ T KSDV+SFGI++ E+V+ R + YP
Sbjct: 170 AKFPIKWTAPEAINYGTF-TIKSDVWSFGILLTEIVTHGR---IPYP 212
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 120/279 (43%), Gaps = 34/279 (12%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGM-SKCPALRTRFSNELQNLARLRHRNLVQLCG 577
+R+ G + G+ + H V VK L S P F E + +L+H+ LV+L
Sbjct: 19 ERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSP---DAFLAEANLMKQLQHQRLVRLYA 75
Query: 578 WCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWN 637
T Q + +I +Y L L I +I + ++ +A + ++ E
Sbjct: 76 VVT-QEPIYIITEYMENGSLVDFL-KTPSGIKLTI---NKLLDMAAQIAEGMAFIEER-- 128
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
IHR++ ++ I + ++ ++ F LA + + R+ + + +PE
Sbjct: 129 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREG------AKFPIKWTAPEA 181
Query: 698 IESGEATSMADVYSFGVVVLEVVTGQMAVDFRLP-EGLLVKRVHEFEARKRPLAELVDLS 756
I G T +DV+SFG+++ E+VT R+P G+ V + R +
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHG-----RIPYPGMTNPEVIQNLERGYRM------- 229
Query: 757 LNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
+ + +EL +L++L C PE RP+ + S+L+
Sbjct: 230 VRPDNCPEELYQLMRL---CWKERPEDRPTFDYLRSVLE 265
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 136/335 (40%), Gaps = 71/335 (21%)
Query: 97 NPRIFSYAELYIGSNGFDEDEV----------LGSGGFGKVYRAVLPSDGTV-------V 139
NP FS A++Y+ DE EV LG G FG VY V + G V V
Sbjct: 5 NPEYFSAADVYVP----DEWEVAREKITMSRELGQGSFGMVYEGV--AKGVVKDEPETRV 58
Query: 140 AVKCLAEKGERFEKT-FAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRV 198
A+K + E E+ F E + ++VRL G L++ + M L
Sbjct: 59 AIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSY 118
Query: 199 LFR-RPE--NLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQY 255
L RP N AP + + ++ +A + YL+ + +HRD+ N M+ +
Sbjct: 119 LRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDF 175
Query: 256 NARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLP-----PESFQKGS 310
++GDFG+ R + + R GG G LP PES + G
Sbjct: 176 TVKIGDFGMTR------------------DIYETDYYRKGGK-GLLPVRWMSPESLKDG- 215
Query: 311 VATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDG 370
V T SDV+SFG+V+ E+ + ++Q++ R EG +L DN D
Sbjct: 216 VFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL------RFVMEGGLLDKPDN-CPDM 268
Query: 371 SYKLCDMEXXXXXXXXXXXXNPHLRPSMKWVIEAV 405
++L M NP +RPS +I ++
Sbjct: 269 LFELMRM---------CWQYNPKMRPSFLEIISSI 294
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 128/307 (41%), Gaps = 40/307 (13%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFL------DNHQYVLVKRLGMSKCPALRTRFSNELQNL 564
A + S+ + + FG Y+G + V +K + + R F NE +
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 565 ARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLL------FHNNHRIGHSILQWHHR 618
++V+L G ++ LVI + L L NN + L
Sbjct: 83 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS--KM 140
Query: 619 YNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRK 678
+ +A + YL+ + +HR++ + + D ++G F + + D+ +RK
Sbjct: 141 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY-YRK 196
Query: 679 ATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKR 738
G VR +MSPE ++ G T+ +DV+SFGVV+ E+ T + + +GL ++
Sbjct: 197 GGKGLLPVR----WMSPESLKDGVFTTYSDVWSFGVVLWEIAT----LAEQPYQGLSNEQ 248
Query: 739 VHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGND 798
V F L+D N ELMR+ C NP++RPS +I+S +
Sbjct: 249 VLRFVME----GGLLDKPDNCPDMLFELMRM------CWQYNPKMRPSFLEIISSI---- 294
Query: 799 KRFMEDG 805
K ME G
Sbjct: 295 KEEMEPG 301
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 41/228 (17%)
Query: 119 LGSGGFGKVYR---AVLPSDGTV--VAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVR 172
LG G FG+VY + +P+D + VAVK L E E+ E F E + ++ H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 173 LRGWCVHEDQLLLVYDYMPN---RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
G + ++ + M +S R RP + A L+ + R +A
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH---VARDIACGCQ 155
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYN---ARLGDFGLARWLEHELQYQMRTSSARNHQF 286
YL E IHRD+ N +L A++GDFG+A+
Sbjct: 156 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ------------------DI 194
Query: 287 HLAETTRIGGT----IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ A R GG + ++PPE+F +G + T+K+D +SFG+++ E+ S
Sbjct: 195 YRASYYRKGGCAMLPVKWMPPEAFMEG-IFTSKTDTWSFGVLLWEIFS 241
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 12/169 (7%)
Query: 557 FSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGH-SILQW 615
F E +++ H+N+V+ G + ++ + A L L R S L
Sbjct: 81 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 140
Query: 616 HHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLD---PDMNPRLGSFALAEFLTRN 672
++ + +A YL E IHR+I + L P ++G F +A+ + R
Sbjct: 141 LDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRA 197
Query: 673 DHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
+ +RK V+ +M PE G TS D +SFGV++ E+ +
Sbjct: 198 SY-YRKGGCAMLPVK----WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 103/219 (47%), Gaps = 30/219 (13%)
Query: 119 LGSGGFGKV----YRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLVRL 173
LG G FGKV Y + G VAVK L E G E+ + +L H N+V+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 174 RGWCVHE--DQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
+G C + + + L+ +++P+ SL L P+N +N +Q+ K + + YL
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL---PKN---KNKINLKQQLKYAVQICKGMDYL 142
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
+ Q +HRD+ NV+++S++ ++GDFGL + +E + + + F A
Sbjct: 143 GSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA-- 197
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PE + A SDV+SFG+ + E+++
Sbjct: 198 -----------PECLMQSKFYIA-SDVWSFGVTLHELLT 224
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 79/167 (47%), Gaps = 14/167 (8%)
Query: 557 FSNELQNLARLRHRNLVQLCGWCTEQG--EMLVIYDYSATRILSHLLFHNNHRIGHSILQ 614
E++ L L H N+V+ G CTE G + +I ++ + L L N ++I L+
Sbjct: 70 LKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKIN---LK 126
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
+Y + + + YL + Q +HR++ + + ++ + ++G F L + + +
Sbjct: 127 QQLKYAV--QICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD-- 179
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
T + +F Y +PE + + +DV+SFGV + E++T
Sbjct: 180 -KEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 27/213 (12%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G +G+VY V VAVK L E E+ F E + ++H NLV+L G C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 179 HEDQLLLVYDYMP-NRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLET 237
E +V +YMP LD + E + A L + +++A+ YL ++
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLY------MATQISSAMEYLEKK--- 149
Query: 238 QIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGT 297
IHRD+ N ++ + ++ DFGL+R + + + H I T
Sbjct: 150 NFIHRDLAARNCLVGENHVVKVADFGLSRLM-----------TGDTYTAHAGAKFPIKWT 198
Query: 298 IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PES + + KSDV++FG+++ E+ +
Sbjct: 199 A----PESLAYNTFSI-KSDVWAFGVLLWEIAT 226
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 79/171 (46%), Gaps = 15/171 (8%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSAT-RILSHLLFHNNHRIGHSILQ 614
F E + ++H NLVQL G CT + ++ +Y +L +L N + +L
Sbjct: 74 EFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLL 133
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
+ + ++SA+ YL + + IHR++ + + + ++ F L+ +T + +
Sbjct: 134 Y-----MATQISSAMEYLEK---KNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTY 185
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMA 725
+ + + + +PE + + +DV++FGV++ E+ T M+
Sbjct: 186 ------TAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMS 230
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 103/219 (47%), Gaps = 30/219 (13%)
Query: 119 LGSGGFGKV----YRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLVRL 173
LG G FGKV Y + G VAVK L E G E+ + +L H N+V+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 174 RGWCVHE--DQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
+G C + + + L+ +++P+ SL L P+N +N +Q+ K + + YL
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL---PKN---KNKINLKQQLKYAVQICKGMDYL 130
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
+ Q +HRD+ NV+++S++ ++GDFGL + +E + + + F A
Sbjct: 131 GSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA-- 185
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PE + A SDV+SFG+ + E+++
Sbjct: 186 -----------PECLMQSKFYIA-SDVWSFGVTLHELLT 212
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 79/167 (47%), Gaps = 14/167 (8%)
Query: 557 FSNELQNLARLRHRNLVQLCGWCTEQG--EMLVIYDYSATRILSHLLFHNNHRIGHSILQ 614
E++ L L H N+V+ G CTE G + +I ++ + L L N ++I L+
Sbjct: 58 LKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKIN---LK 114
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
+Y + + + YL + Q +HR++ + + ++ + ++G F L + + +
Sbjct: 115 QQLKYAV--QICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD-- 167
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
T + +F Y +PE + + +DV+SFGV + E++T
Sbjct: 168 -KEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 113/222 (50%), Gaps = 30/222 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG+G FG+V+ A + T VAVK + + G + F AE + L+H LV+L V
Sbjct: 23 LGAGQFGEVWMATY-NKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHA-VV 79
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
++ + ++ ++M SL L + E + P + +I G+A ++ ++
Sbjct: 80 TKEPIYIITEFMAKGSLLDFL-KSDEGSKQPLPKLIDFSAQIAEGMA----FIEQR---N 131
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
IHRD++ +N+++ + ++ DFGLAR +E ++++ E + I
Sbjct: 132 YIHRDLRAANILVSASLVCKIADFGLARVIE-------------DNEYTAREGAKF--PI 176
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
+ PE+ GS T KSDV+SFGI+++E+V+ R + YP
Sbjct: 177 KWTAPEAINFGSF-TIKSDVWSFGILLMEIVTYGR---IPYP 214
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 113/272 (41%), Gaps = 34/272 (12%)
Query: 526 FGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEM 585
FG + + H V VK + F E + L+H LV+L T++ +
Sbjct: 28 FGEVWMATYNKHTKVAVKTMKPGSMSV--EAFLAEANVMKTLQHDKLVKLHAVVTKE-PI 84
Query: 586 LVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNI 645
+I ++ A L L + S + +A + ++ + IHR++
Sbjct: 85 YIITEFMAKGSLLDFLKSDEG----SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDL 137
Query: 646 TSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATS 705
++ I + + ++ F LA + N++ R+ + + +PE I G T
Sbjct: 138 RAANILVSASLVCKIADFGLARVIEDNEYTAREGA------KFPIKWTAPEAINFGSFTI 191
Query: 706 MADVYSFGVVVLEVVT-GQMAVD-FRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNH 763
+DV+SFG++++E+VT G++ PE +++ + RP E
Sbjct: 192 KSDVWSFGILLMEIVTYGRIPYPGMSNPE--VIRALERGYRMPRP-----------ENCP 238
Query: 764 KELMRLIKLGIACTLSNPELRPSMRQILSILD 795
+EL ++ + C + PE RP+ I S+LD
Sbjct: 239 EELYNIM---MRCWKNRPEERPTFEYIQSVLD 267
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 113/222 (50%), Gaps = 30/222 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG+G FG+V+ A + T VAVK + + G + F AE + L+H LV+L V
Sbjct: 196 LGAGQFGEVWMATY-NKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHA-VV 252
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
++ + ++ ++M SL L + E + P + +I G+A ++ ++
Sbjct: 253 TKEPIYIITEFMAKGSLLDFL-KSDEGSKQPLPKLIDFSAQIAEGMA----FIEQR---N 304
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
IHRD++ +N+++ + ++ DFGLAR +E ++++ E + I
Sbjct: 305 YIHRDLRAANILVSASLVCKIADFGLARVIE-------------DNEYTAREGAKF--PI 349
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
+ PE+ GS T KSDV+SFGI+++E+V+ R + YP
Sbjct: 350 KWTAPEAINFGSF-TIKSDVWSFGILLMEIVTYGR---IPYP 387
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 112/277 (40%), Gaps = 30/277 (10%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGW 578
+++ FG + + H V VK + F E + L+H LV+L
Sbjct: 194 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV--EAFLAEANVMKTLQHDKLVKLHAV 251
Query: 579 CTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNE 638
T++ + +I ++ A L L + S + +A + ++ +
Sbjct: 252 VTKE-PIYIITEFMAKGSLLDFLKSDEG----SKQPLPKLIDFSAQIAEGMAFIEQR--- 303
Query: 639 QVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYI 698
IHR++ ++ I + + ++ F LA + N++ R+ + + +PE I
Sbjct: 304 NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG------AKFPIKWTAPEAI 357
Query: 699 ESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSLN 758
G T +DV+SFG++++E+VT + +++ + RP
Sbjct: 358 NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRP---------- 407
Query: 759 GEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
E +EL ++ + C + PE RP+ I S+LD
Sbjct: 408 -ENCPEELYNIM---MRCWKNRPEERPTFEYIQSVLD 440
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 26/212 (12%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG+G FG+V+ ++ T VAVK L + G + F E + L+H LVRL
Sbjct: 21 LGAGQFGEVWMGYY-NNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E+ + ++ +YM SL L + E + P + +I G+A Y+ +
Sbjct: 79 REEPIYIITEYMAKGSLLDFL-KSDEGGKVLLPKLIDFSAQIAEGMA----YIERK---N 130
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
IHRD++ +NV++ ++ DFGLAR +E ++++ E + I
Sbjct: 131 YIHRDLRAANVLVSESLMCKIADFGLARVIE-------------DNEYTAREGAKF--PI 175
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ PE+ G T KSDV+SFGI++ E+V+
Sbjct: 176 KWTAPEAINFGCF-TIKSDVWSFGILLYEIVT 206
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGW 578
+R+ FG + G+ +N V VK L F E + L+H LV+L
Sbjct: 19 KRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSV--QAFLEEANLMKTLQHDKLVRLYAV 76
Query: 579 CTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNE 638
T + + +I +Y A S L F + G +L + +A + Y+ +
Sbjct: 77 VTREEPIYIITEYMAKG--SLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIE---RK 129
Query: 639 QVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYI 698
IHR++ ++ + + + ++ F LA + N++ R+ + + +PE I
Sbjct: 130 NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGA------KFPIKWTAPEAI 183
Query: 699 ESGEATSMADVYSFGVVVLEVVT 721
G T +DV+SFG+++ E+VT
Sbjct: 184 NFGCFTIKSDVWSFGILLYEIVT 206
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 119/254 (46%), Gaps = 47/254 (18%)
Query: 117 EVLGSGGFGKV----YRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVR 172
+ +G G FG V YR G VAVKC+ K + + F AE + LRH NLV+
Sbjct: 18 QTIGKGEFGDVMLGDYR------GNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQ 69
Query: 173 LRGWCVHED-QLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
L G V E L +V +YM SL L R ++ L + K + A+ YL
Sbjct: 70 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-----LGGDCLLKFSLDVCEAMEYL 124
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
+HRD+ NV++ A++ DFGL T A + Q +T
Sbjct: 125 EGN---NFVHRDLAARNVLVSEDNVAKVSDFGL-------------TKEASSTQ----DT 164
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIR 351
++ + + PE+ ++ + +T KSDV+SFGI++ E+ S R + YP +I L D +
Sbjct: 165 GKL--PVKWTAPEALREAAFST-KSDVWSFGILLWEIYSFGR---VPYP--RIPLKDVVP 216
Query: 352 RLSDEGKVLQAGDN 365
R+ ++G + A D
Sbjct: 217 RV-EKGYKMDAPDG 229
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 96/224 (42%), Gaps = 22/224 (9%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGW 578
Q + + +FG G ++ V VK + K A F E + +LRH NLVQL G
Sbjct: 18 QTIGKGEFGDVMLGDYRGNK-VAVKCI---KNDATAQAFLAEASVMTQLRHSNLVQLLGV 73
Query: 579 CTEQ-GEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWN 637
E+ G + ++ +Y A L L G S+L + A+ YL
Sbjct: 74 IVEEKGGLYIVTEYMAKGSLVDYLRSR----GRSVLGGDCLLKFSLDVCEAMEYLE---G 126
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
+HR++ + + + D ++ F L ++A+S + + + +PE
Sbjct: 127 NNFVHRDLAARNVLVSEDNVAKVSDFGLT----------KEASSTQDTGKLPVKWTAPEA 176
Query: 698 IESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHE 741
+ ++ +DV+SFG+++ E+ + R+P +V RV +
Sbjct: 177 LREAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK 220
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 135/331 (40%), Gaps = 71/331 (21%)
Query: 101 FSYAELYIGSNGFDEDEV----------LGSGGFGKVYRAVLPSDGTV-------VAVKC 143
FS A++Y+ DE EV LG G FG VY V + G V VA+K
Sbjct: 3 FSAADVYVP----DEWEVAREKITMSRELGQGSFGMVYEGV--AKGVVKDEPETRVAIKT 56
Query: 144 LAEKGERFEKT-FAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFR- 201
+ E E+ F E + ++VRL G L++ + M L L
Sbjct: 57 VNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL 116
Query: 202 RPE--NLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARL 259
RPE N AP + + ++ +A + YL+ + +HRD+ N M+ + ++
Sbjct: 117 RPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKI 173
Query: 260 GDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLP-----PESFQKGSVATA 314
GDFG+ R + + R GG G LP PES + G V T
Sbjct: 174 GDFGMTRDIXE------------------TDXXRKGGK-GLLPVRWMSPESLKDG-VFTT 213
Query: 315 KSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKL 374
SDV+SFG+V+ E+ + ++Q++ R EG +L DN D ++L
Sbjct: 214 YSDVWSFGVVLWEIATLAEQPYQGLSNEQVL------RFVMEGGLLDKPDN-CPDMLFEL 266
Query: 375 CDMEXXXXXXXXXXXXNPHLRPSMKWVIEAV 405
M NP +RPS +I ++
Sbjct: 267 MRM---------CWQYNPKMRPSFLEIISSI 288
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 126/307 (41%), Gaps = 40/307 (13%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFL------DNHQYVLVKRLGMSKCPALRTRFSNELQNL 564
A + S+ + + FG Y+G + V +K + + R F NE +
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 565 ARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLL------FHNNHRIGHSILQWHHR 618
++V+L G ++ LVI + L L NN + L
Sbjct: 77 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KM 134
Query: 619 YNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRK 678
+ +A + YL+ + +HR++ + + D ++G F + + D RK
Sbjct: 135 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDX-XRK 190
Query: 679 ATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKR 738
G VR +MSPE ++ G T+ +DV+SFGVV+ E+ T + + +GL ++
Sbjct: 191 GGKGLLPVR----WMSPESLKDGVFTTYSDVWSFGVVLWEIAT----LAEQPYQGLSNEQ 242
Query: 739 VHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGND 798
V F L+D N ELMR+ C NP++RPS +I+S +
Sbjct: 243 VLRFVME----GGLLDKPDNCPDMLFELMRM------CWQYNPKMRPSFLEIISSI---- 288
Query: 799 KRFMEDG 805
K ME G
Sbjct: 289 KEEMEPG 295
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 135/331 (40%), Gaps = 71/331 (21%)
Query: 101 FSYAELYIGSNGFDEDEV----------LGSGGFGKVYRAVLPSDGTV-------VAVKC 143
FS A++Y+ DE EV LG G FG VY V + G V VA+K
Sbjct: 3 FSAADVYVP----DEWEVAREKITMSRELGQGSFGMVYEGV--AKGVVKDEPETRVAIKT 56
Query: 144 LAEKGERFEKT-FAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFR- 201
+ E E+ F E + ++VRL G L++ + M L L
Sbjct: 57 VNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL 116
Query: 202 RPE--NLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARL 259
RPE N AP + + ++ +A + YL+ + +HRD+ N M+ + ++
Sbjct: 117 RPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKI 173
Query: 260 GDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLP-----PESFQKGSVATA 314
GDFG+ R + + R GG G LP PES + G V T
Sbjct: 174 GDFGMTR------------------DIYETDYYRKGGK-GLLPVRWMSPESLKDG-VFTT 213
Query: 315 KSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKL 374
SDV+SFG+V+ E+ + ++Q++ R EG +L DN D ++L
Sbjct: 214 YSDVWSFGVVLWEIATLAEQPYQGLSNEQVL------RFVMEGGLLDKPDN-CPDMLFEL 266
Query: 375 CDMEXXXXXXXXXXXXNPHLRPSMKWVIEAV 405
M NP +RPS +I ++
Sbjct: 267 MRM---------CWQYNPKMRPSFLEIISSI 288
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 128/307 (41%), Gaps = 40/307 (13%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFL------DNHQYVLVKRLGMSKCPALRTRFSNELQNL 564
A + S+ + + FG Y+G + V +K + + R F NE +
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 565 ARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLL------FHNNHRIGHSILQWHHR 618
++V+L G ++ LVI + L L NN + L
Sbjct: 77 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KM 134
Query: 619 YNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRK 678
+ +A + YL+ + +HR++ + + D ++G F + + D+ +RK
Sbjct: 135 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY-YRK 190
Query: 679 ATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKR 738
G VR +MSPE ++ G T+ +DV+SFGVV+ E+ T + + +GL ++
Sbjct: 191 GGKGLLPVR----WMSPESLKDGVFTTYSDVWSFGVVLWEIAT----LAEQPYQGLSNEQ 242
Query: 739 VHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGND 798
V F L+D N ELMR+ C NP++RPS +I+S +
Sbjct: 243 VLRFVME----GGLLDKPDNCPDMLFELMRM------CWQYNPKMRPSFLEIISSI---- 288
Query: 799 KRFMEDG 805
K ME G
Sbjct: 289 KEEMEPG 295
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 36/230 (15%)
Query: 119 LGSGGFGKVYRAVL-------PSDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHL-RHRN 169
LG G FG+V A P + VAVK L + E+ +E+ + + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVL-FRRPENLEAAAPLNWEQRKKII------- 221
++ L G C + L ++ +Y +L L RRP +E + +N +++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 222 -RGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSS 280
LA + YL Q + IHRD+ NV++ R+ DFGLAR + + + Y +T++
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDI-NNIDYYKKTTN 218
Query: 281 ARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
R + ++ PE+ V T +SDV+SFG+++ E+ +
Sbjct: 219 GRL-------------PVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFT 254
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 109/238 (45%), Gaps = 32/238 (13%)
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLL----------FHNNHRIGHSILQWHH 617
+H+N++ L G CT+ G + VI +Y++ L L ++ +R+ + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 618 RYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHR 677
+ LA + YL +++ IHR++ + + + + R+ F LA + D+ ++
Sbjct: 159 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDY-YK 214
Query: 678 KATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVK 737
K T+G V+ +M+PE + T +DV+SFGV++ E+ T + +P L K
Sbjct: 215 KTTNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270
Query: 738 RVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
+ E +P +L + +MR C + P RP+ +Q++ LD
Sbjct: 271 LLKEGHRMDKPANCTNELYM--------MMR------DCWHAVPSQRPTFKQLVEDLD 314
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 106/235 (45%), Gaps = 50/235 (21%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVR 172
F E E++GSGGFG+V++A DG +K + E+ E+ E+ A+A L H N+V
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIVH 68
Query: 173 LRGWCVHEDQLLLVYDYMP-------NRSLDRVLFRRPENLEAAAPLNWEQRKK------ 219
G C +DY P +RS + LF + E + W ++++
Sbjct: 69 YNG-CWDG------FDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDK 121
Query: 220 -----IIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQY 274
+ + + Y+H + ++I+RD+K SN+ L ++GDFGL L+++
Sbjct: 122 VLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND--- 175
Query: 275 QMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVV 329
+ R GT+ Y+ PE + D+++ G+++ E++
Sbjct: 176 --------------GKRXRSKGTLRYMSPEQISSQDYG-KEVDLYALGLILAELL 215
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 124/302 (41%), Gaps = 65/302 (21%)
Query: 514 NFSESQRVAEMDFGTAYQGF--LDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRN 571
+F E + + FG ++ +D YV +KR+ + A R E++ LA+L H N
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYV-IKRVKYNNEKAER-----EVKALAKLDHVN 65
Query: 572 LVQLCGWCTEQGEMLVIYDY-------SATRILSHLLFHNNHRIGHSIL-QWHHR----- 618
+V G C + +DY +++R + LF L QW +
Sbjct: 66 IVHYNG-CWDG------FDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK 118
Query: 619 ------YNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRN 672
+ + + + Y+H ++++I+R++ S I L ++G F L L +N
Sbjct: 119 LDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSL-KN 174
Query: 673 DHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPE 732
D G R + +G YMSPE I S + D+Y+ G+++ E
Sbjct: 175 D-GKRXRS------KGTLRYMSPEQISSQDYGKEVDLYALGLILAE-------------- 213
Query: 733 GLLVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792
LL FE K +L D ++ ++ KE L KL PE RP+ +IL
Sbjct: 214 -LLHVCDTAFETSK-FFTDLRDGIISDIFDKKEKTLLQKL----LSKKPEDRPNTSEILR 267
Query: 793 IL 794
L
Sbjct: 268 TL 269
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 118/254 (46%), Gaps = 41/254 (16%)
Query: 84 MEGVQMSEKVGGDNPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDG----TVV 139
+E + SEK RIF EL + +VLGSG FG V++ V +G V
Sbjct: 11 IEPLDPSEKANKVLARIFKETELR-------KLKVLGSGVFGTVHKGVWIPEGESIKIPV 63
Query: 140 AVKCLAEKGERFEKTFAA---ELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLD 196
+K + +K R ++F A ++A+ L H ++VRL G C L LV Y+P SL
Sbjct: 64 CIKVIEDKSGR--QSFQAVTDHMLAIGSLDHAHIVRLLGLCPG-SSLQLVTQYLPLGSLL 120
Query: 197 RVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYN 256
+ + L LNW + +A ++YL E ++HR++ NV+L S
Sbjct: 121 DHVRQHRGALGPQLLLNWGVQ------IAKGMYYLEEH---GMVHRNLAARNVLLKSPSQ 171
Query: 257 ARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKS 316
++ DFG+A L + Q+ S A+ I ++ ES G T +S
Sbjct: 172 VQVADFGVADLLPPD-DKQLLYSEAKT-------------PIKWMALESIHFGKY-THQS 216
Query: 317 DVFSFGIVVLEVVS 330
DV+S+G+ V E+++
Sbjct: 217 DVWSYGVTVWELMT 230
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 72/164 (43%), Gaps = 14/164 (8%)
Query: 558 SNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHH 617
++ + + L H ++V+L G C LV +L H+ H +L W
Sbjct: 81 TDHMLAIGSLDHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGV 140
Query: 618 RYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHR 677
+ +A + YL E ++HRN+ + + L ++ F +A+ L +D
Sbjct: 141 Q------IAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLL 191
Query: 678 KATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
+ + + +M+ E I G+ T +DV+S+GV V E++T
Sbjct: 192 YSEA-----KTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 118/253 (46%), Gaps = 47/253 (18%)
Query: 117 EVLGSGGFGKV----YRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVR 172
+ +G G FG V YR G VAVKC+ K + + F AE + LRH NLV+
Sbjct: 199 QTIGKGEFGDVMLGDYR------GNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQ 250
Query: 173 LRGWCVHED-QLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
L G V E L +V +YM SL L R ++ L + K + A+ YL
Sbjct: 251 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-----LGGDCLLKFSLDVCEAMEYL 305
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
+HRD+ NV++ A++ DFGL T A + Q +T
Sbjct: 306 EGN---NFVHRDLAARNVLVSEDNVAKVSDFGL-------------TKEASSTQ----DT 345
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIR 351
++ + + PE+ ++ +T KSDV+SFGI++ E+ S R + YP +I L D +
Sbjct: 346 GKL--PVKWTAPEALREKKFST-KSDVWSFGILLWEIYSFGR---VPYP--RIPLKDVVP 397
Query: 352 RLSDEGKVLQAGD 364
R+ ++G + A D
Sbjct: 398 RV-EKGYKMDAPD 409
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 97/224 (43%), Gaps = 22/224 (9%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGW 578
Q + + +FG G ++ V VK + K A F E + +LRH NLVQL G
Sbjct: 199 QTIGKGEFGDVMLGDYRGNK-VAVKCI---KNDATAQAFLAEASVMTQLRHSNLVQLLGV 254
Query: 579 CTEQ-GEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWN 637
E+ G + ++ +Y A L L G S+L + A+ YL
Sbjct: 255 IVEEKGGLYIVTEYMAKGSLVDYLRSR----GRSVLGGDCLLKFSLDVCEAMEYLE---G 307
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
+HR++ + + + D ++ F L ++A+S + + + +PE
Sbjct: 308 NNFVHRDLAARNVLVSEDNVAKVSDFGLT----------KEASSTQDTGKLPVKWTAPEA 357
Query: 698 IESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHE 741
+ + ++ +DV+SFG+++ E+ + R+P +V RV +
Sbjct: 358 LREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK 401
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 124/303 (40%), Gaps = 57/303 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTV-------VAVKCLAEKGERFEKT-FAAELVAVAHLRHRNL 170
LG G FG VY V + G V VA+K + E E+ F E + ++
Sbjct: 26 LGQGSFGMVYEGV--AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 83
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFR-RPE--NLEAAAPLNWEQRKKIIRGLAAA 227
VRL G L++ + M L L RPE N AP + + ++ +A
Sbjct: 84 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
+ YL+ + +HRD+ N M+ + ++GDFG+ R +
Sbjct: 144 MAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR------------------DIY 182
Query: 288 LAETTRIGGTIGYLP-----PESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDD 342
+ R GG G LP PES + G V T SDV+SFG+V+ E+ + ++
Sbjct: 183 ETDYYRKGGK-GLLPVRWMSPESLKDG-VFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 240
Query: 343 QIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEXXXXXXXXXXXXNPHLRPSMKWVI 402
Q++ R EG +L DN D ++L M NP +RPS +I
Sbjct: 241 QVL------RFVMEGGLLDKPDN-CPDMLFELMRM---------CWQYNPKMRPSFLEII 284
Query: 403 EAV 405
++
Sbjct: 285 SSI 287
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 128/307 (41%), Gaps = 40/307 (13%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFL------DNHQYVLVKRLGMSKCPALRTRFSNELQNL 564
A + S+ + + FG Y+G + V +K + + R F NE +
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 565 ARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLL------FHNNHRIGHSILQWHHR 618
++V+L G ++ LVI + L L NN + L
Sbjct: 76 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KM 133
Query: 619 YNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRK 678
+ +A + YL+ + +HR++ + + D ++G F + + D+ +RK
Sbjct: 134 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY-YRK 189
Query: 679 ATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKR 738
G VR +MSPE ++ G T+ +DV+SFGVV+ E+ T + + +GL ++
Sbjct: 190 GGKGLLPVR----WMSPESLKDGVFTTYSDVWSFGVVLWEIAT----LAEQPYQGLSNEQ 241
Query: 739 VHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGND 798
V F L+D N ELMR+ C NP++RPS +I+S +
Sbjct: 242 VLRFVME----GGLLDKPDNCPDMLFELMRM------CWQYNPKMRPSFLEIISSI---- 287
Query: 799 KRFMEDG 805
K ME G
Sbjct: 288 KEEMEPG 294
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 124/303 (40%), Gaps = 57/303 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTV-------VAVKCLAEKGERFEKT-FAAELVAVAHLRHRNL 170
LG G FG VY V + G V VA+K + E E+ F E + ++
Sbjct: 20 LGQGSFGMVYEGV--AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 77
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFR-RPE--NLEAAAPLNWEQRKKIIRGLAAA 227
VRL G L++ + M L L RPE N AP + + ++ +A
Sbjct: 78 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
+ YL+ + +HRD+ N M+ + ++GDFG+ R +
Sbjct: 138 MAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR------------------DIY 176
Query: 288 LAETTRIGGTIGYLP-----PESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDD 342
+ R GG G LP PES + G V T SDV+SFG+V+ E+ + ++
Sbjct: 177 ETDYYRKGGK-GLLPVRWMSPESLKDG-VFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 234
Query: 343 QIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEXXXXXXXXXXXXNPHLRPSMKWVI 402
Q++ R EG +L DN D ++L M NP +RPS +I
Sbjct: 235 QVL------RFVMEGGLLDKPDN-CPDMLFELMRM---------CWQYNPKMRPSFLEII 278
Query: 403 EAV 405
++
Sbjct: 279 SSI 281
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 128/307 (41%), Gaps = 40/307 (13%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFL------DNHQYVLVKRLGMSKCPALRTRFSNELQNL 564
A + S+ + + FG Y+G + V +K + + R F NE +
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 565 ARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLL------FHNNHRIGHSILQWHHR 618
++V+L G ++ LVI + L L NN + L
Sbjct: 70 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KM 127
Query: 619 YNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRK 678
+ +A + YL+ + +HR++ + + D ++G F + + D+ +RK
Sbjct: 128 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY-YRK 183
Query: 679 ATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKR 738
G VR +MSPE ++ G T+ +DV+SFGVV+ E+ T + + +GL ++
Sbjct: 184 GGKGLLPVR----WMSPESLKDGVFTTYSDVWSFGVVLWEIAT----LAEQPYQGLSNEQ 235
Query: 739 VHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGND 798
V F L+D N ELMR+ C NP++RPS +I+S +
Sbjct: 236 VLRFVME----GGLLDKPDNCPDMLFELMRM------CWQYNPKMRPSFLEIISSI---- 281
Query: 799 KRFMEDG 805
K ME G
Sbjct: 282 KEEMEPG 288
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKCL--AEKGERFEKTFAAELVAVAHLRHRNLVRLRG 175
+G+G +G+ + SDG ++ K L E ++ +E+ + L+H N+VR
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 176 WCVHEDQ--LLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHE 233
+ L +V +Y L V+ + + + L+ E +++ L AL H
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY---LDEEFVLRVMTQLTLALKECHR 129
Query: 234 QLET--QIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
+ + ++HRD+K +NV LD + N +LGDFGLAR L H+ TS A+
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD------TSFAKT-------- 175
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
GT Y+ PE + S KSD++S G ++ E+ +
Sbjct: 176 --FVGTPYYMSPEQMNRMSY-NEKSDIWSLGCLLYELCA 211
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 640 VIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIE 699
V+HR++ + + LD N +LG F LA L + TS ++ G YMSPE +
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHD-------TSFAKTFVGTPYYMSPEQMN 189
Query: 700 SGEATSMADVYSFGVVVLEV 719
+D++S G ++ E+
Sbjct: 190 RMSYNEKSDIWSLGCLLYEL 209
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 30/219 (13%)
Query: 116 DEVLGSGGFGKVYRAVLPS---DGTVVAVK-CLAEKGERFEKTFAAELVAVAHLRHRNLV 171
+ +LG G FG+VY V + + VAVK C + ++ F +E V + +L H ++V
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
+L G + E+ ++ + P L L R +L+ + + + + A+ YL
Sbjct: 77 KLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQ------ICKAMAYL 129
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
+HRD+ N+++ S +LGDFGL+R++E E Y+ A
Sbjct: 130 ES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYK-------------ASV 173
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
TR+ I ++ PES TA SDV+ F + + E++S
Sbjct: 174 TRL--PIKWMSPESINFRRFTTA-SDVWMFAVCMWEILS 209
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 19/200 (9%)
Query: 526 FGTAYQGFLDNHQ----YVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTE 581
FG Y+G NH+ V VK + +F +E + L H ++V+L G E
Sbjct: 25 FGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE 84
Query: 582 QGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVI 641
+ +++ Y L H L N + + L + + A+ YL + +
Sbjct: 85 EPTWIIMELYPYGE-LGHYLERNKNSLKVLTLVLYSL-----QICKAMAYLE---SINCV 135
Query: 642 HRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESG 701
HR+I I + +LG F L+ ++ D + KA+ ++ +MSPE I
Sbjct: 136 HRDIAVRNILVASPECVKLGDFGLSRYI--EDEDYYKASVTRLPIK----WMSPESINFR 189
Query: 702 EATSMADVYSFGVVVLEVVT 721
T+ +DV+ F V + E+++
Sbjct: 190 RFTTASDVWMFAVCMWEILS 209
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 126/303 (41%), Gaps = 57/303 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTV-------VAVKCLAEKGERFEKT-FAAELVAVAHLRHRNL 170
LG G FG VY V + G V VA+K + E E+ F E + ++
Sbjct: 26 LGQGSFGMVYEGV--AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 83
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFR-RPE--NLEAAAPLNWEQRKKIIRGLAAA 227
VRL G L++ + M L L RPE N AP + + ++ +A
Sbjct: 84 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
+ YL+ + +HRD+ N M+ + ++GDFG+ R + +E Y
Sbjct: 144 MAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYY------------ 187
Query: 288 LAETTRIGGTIGYLP-----PESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDD 342
R GG G LP PES + G V T SDV+SFG+V+ E+ + ++
Sbjct: 188 -----RKGGK-GLLPVRWMSPESLKDG-VFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 240
Query: 343 QIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEXXXXXXXXXXXXNPHLRPSMKWVI 402
Q++ R EG +L DN D ++L M NP +RPS +I
Sbjct: 241 QVL------RFVMEGGLLDKPDN-CPDMLFELMRM---------CWQYNPKMRPSFLEII 284
Query: 403 EAV 405
++
Sbjct: 285 SSI 287
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 128/307 (41%), Gaps = 40/307 (13%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFL------DNHQYVLVKRLGMSKCPALRTRFSNELQNL 564
A + S+ + + FG Y+G + V +K + + R F NE +
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 565 ARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLL------FHNNHRIGHSILQWHHR 618
++V+L G ++ LVI + L L NN + L
Sbjct: 76 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KM 133
Query: 619 YNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRK 678
+ +A + YL+ + +HR++ + + D ++G F + + D+ +RK
Sbjct: 134 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY-YRK 189
Query: 679 ATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKR 738
G VR +MSPE ++ G T+ +DV+SFGVV+ E+ T + + +GL ++
Sbjct: 190 GGKGLLPVR----WMSPESLKDGVFTTYSDVWSFGVVLWEIAT----LAEQPYQGLSNEQ 241
Query: 739 VHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGND 798
V F L+D N ELMR+ C NP++RPS +I+S +
Sbjct: 242 VLRFVME----GGLLDKPDNCPDMLFELMRM------CWQYNPKMRPSFLEIISSI---- 287
Query: 799 KRFMEDG 805
K ME G
Sbjct: 288 KEEMEPG 294
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 124/303 (40%), Gaps = 57/303 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTV-------VAVKCLAEKGERFEKT-FAAELVAVAHLRHRNL 170
LG G FG VY V + G V VA+K + E E+ F E + ++
Sbjct: 24 LGQGSFGMVYEGV--AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 81
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFR-RPE--NLEAAAPLNWEQRKKIIRGLAAA 227
VRL G L++ + M L L RPE N AP + + ++ +A
Sbjct: 82 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 141
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
+ YL+ + +HRD+ N M+ + ++GDFG+ R +
Sbjct: 142 MAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR------------------DIY 180
Query: 288 LAETTRIGGTIGYLP-----PESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDD 342
+ R GG G LP PES + G V T SDV+SFG+V+ E+ + ++
Sbjct: 181 ETDYYRKGGK-GLLPVRWMSPESLKDG-VFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 238
Query: 343 QIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEXXXXXXXXXXXXNPHLRPSMKWVI 402
Q++ R EG +L DN D ++L M NP +RPS +I
Sbjct: 239 QVL------RFVMEGGLLDKPDN-CPDMLFELMRM---------CWQYNPKMRPSFLEII 282
Query: 403 EAV 405
++
Sbjct: 283 SSI 285
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 128/307 (41%), Gaps = 40/307 (13%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFL------DNHQYVLVKRLGMSKCPALRTRFSNELQNL 564
A + S+ + + FG Y+G + V +K + + R F NE +
Sbjct: 14 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 73
Query: 565 ARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLL------FHNNHRIGHSILQWHHR 618
++V+L G ++ LVI + L L NN + L
Sbjct: 74 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KM 131
Query: 619 YNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRK 678
+ +A + YL+ + +HR++ + + D ++G F + + D+ +RK
Sbjct: 132 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY-YRK 187
Query: 679 ATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKR 738
G VR +MSPE ++ G T+ +DV+SFGVV+ E+ T + + +GL ++
Sbjct: 188 GGKGLLPVR----WMSPESLKDGVFTTYSDVWSFGVVLWEIAT----LAEQPYQGLSNEQ 239
Query: 739 VHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGND 798
V F L+D N ELMR+ C NP++RPS +I+S +
Sbjct: 240 VLRFVME----GGLLDKPDNCPDMLFELMRM------CWQYNPKMRPSFLEIISSI---- 285
Query: 799 KRFMEDG 805
K ME G
Sbjct: 286 KEEMEPG 292
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 30/219 (13%)
Query: 116 DEVLGSGGFGKVYRAVLPS---DGTVVAVK-CLAEKGERFEKTFAAELVAVAHLRHRNLV 171
+ +LG G FG+VY V + + VAVK C + ++ F +E V + +L H ++V
Sbjct: 29 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
+L G + E+ ++ + P L L R +L+ + + + + A+ YL
Sbjct: 89 KLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQ------ICKAMAYL 141
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
+HRD+ N+++ S +LGDFGL+R++E E Y+ A
Sbjct: 142 ES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYK-------------ASV 185
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
TR+ I ++ PES TA SDV+ F + + E++S
Sbjct: 186 TRL--PIKWMSPESINFRRFTTA-SDVWMFAVCMWEILS 221
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 19/200 (9%)
Query: 526 FGTAYQGFLDNHQ----YVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTE 581
FG Y+G NH+ V VK + +F +E + L H ++V+L G E
Sbjct: 37 FGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE 96
Query: 582 QGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVI 641
+ +++ Y L H L N + + L + + A+ YL + +
Sbjct: 97 EPTWIIMELYPYGE-LGHYLERNKNSLKVLTLVLYSL-----QICKAMAYLE---SINCV 147
Query: 642 HRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESG 701
HR+I I + +LG F L+ ++ D + KA+ ++ +MSPE I
Sbjct: 148 HRDIAVRNILVASPECVKLGDFGLSRYI--EDEDYYKASVTRLPIK----WMSPESINFR 201
Query: 702 EATSMADVYSFGVVVLEVVT 721
T+ +DV+ F V + E+++
Sbjct: 202 RFTTASDVWMFAVCMWEILS 221
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 30/219 (13%)
Query: 116 DEVLGSGGFGKVYRAVLPS---DGTVVAVK-CLAEKGERFEKTFAAELVAVAHLRHRNLV 171
+ +LG G FG+VY V + + VAVK C + ++ F +E V + +L H ++V
Sbjct: 13 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
+L G + E+ ++ + P L L R +L+ + + + + A+ YL
Sbjct: 73 KLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQ------ICKAMAYL 125
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
+HRD+ N+++ S +LGDFGL+R++E E Y+ A
Sbjct: 126 ES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYK-------------ASV 169
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
TR+ I ++ PES TA SDV+ F + + E++S
Sbjct: 170 TRL--PIKWMSPESINFRRFTTA-SDVWMFAVCMWEILS 205
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 19/200 (9%)
Query: 526 FGTAYQGFLDNHQ----YVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTE 581
FG Y+G NH+ V VK + +F +E + L H ++V+L G E
Sbjct: 21 FGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE 80
Query: 582 QGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVI 641
+ +++ Y L H L N + + L + + A+ YL + +
Sbjct: 81 EPTWIIMELYPYGE-LGHYLERNKNSLKVLTLVLYSL-----QICKAMAYLE---SINCV 131
Query: 642 HRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESG 701
HR+I I + +LG F L+ ++ D + KA+ ++ +MSPE I
Sbjct: 132 HRDIAVRNILVASPECVKLGDFGLSRYI--EDEDYYKASVTRLPIK----WMSPESINFR 185
Query: 702 EATSMADVYSFGVVVLEVVT 721
T+ +DV+ F V + E+++
Sbjct: 186 RFTTASDVWMFAVCMWEILS 205
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 118/254 (46%), Gaps = 47/254 (18%)
Query: 117 EVLGSGGFGKV----YRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVR 172
+ +G G FG V YR G VAVKC+ K + + F AE + LRH NLV+
Sbjct: 27 QTIGKGEFGDVMLGDYR------GNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQ 78
Query: 173 LRGWCVHED-QLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
L G V E L +V +YM SL L R ++ L + K + A+ YL
Sbjct: 79 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-----LGGDCLLKFSLDVCEAMEYL 133
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
+HRD+ NV++ A++ DFGL T A + Q +T
Sbjct: 134 E---GNNFVHRDLAARNVLVSEDNVAKVSDFGL-------------TKEASSTQ----DT 173
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIR 351
++ + + PE+ ++ +T KSDV+SFGI++ E+ S R + YP +I L D +
Sbjct: 174 GKL--PVKWTAPEALREKKFST-KSDVWSFGILLWEIYSFGR---VPYP--RIPLKDVVP 225
Query: 352 RLSDEGKVLQAGDN 365
R+ ++G + A D
Sbjct: 226 RV-EKGYKMDAPDG 238
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 97/224 (43%), Gaps = 22/224 (9%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGW 578
Q + + +FG G ++ V VK + K A F E + +LRH NLVQL G
Sbjct: 27 QTIGKGEFGDVMLGDYRGNK-VAVKCI---KNDATAQAFLAEASVMTQLRHSNLVQLLGV 82
Query: 579 CTEQ-GEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWN 637
E+ G + ++ +Y A L L G S+L + A+ YL
Sbjct: 83 IVEEKGGLYIVTEYMAKGSLVDYLRSR----GRSVLGGDCLLKFSLDVCEAMEYLE---G 135
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
+HR++ + + + D ++ F L ++A+S + + + +PE
Sbjct: 136 NNFVHRDLAARNVLVSEDNVAKVSDFGLT----------KEASSTQDTGKLPVKWTAPEA 185
Query: 698 IESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHE 741
+ + ++ +DV+SFG+++ E+ + R+P +V RV +
Sbjct: 186 LREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK 229
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 118/253 (46%), Gaps = 47/253 (18%)
Query: 117 EVLGSGGFGKV----YRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVR 172
+ +G G FG V YR G VAVKC+ K + + F AE + LRH NLV+
Sbjct: 12 QTIGKGEFGDVMLGDYR------GNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQ 63
Query: 173 LRGWCVHED-QLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
L G V E L +V +YM SL L R ++ L + K + A+ YL
Sbjct: 64 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-----LGGDCLLKFSLDVCEAMEYL 118
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
+HRD+ NV++ A++ DFGL T A + Q +T
Sbjct: 119 EGN---NFVHRDLAARNVLVSEDNVAKVSDFGL-------------TKEASSTQ----DT 158
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIR 351
++ + + PE+ ++ +T KSDV+SFGI++ E+ S R + YP +I L D +
Sbjct: 159 GKL--PVKWTAPEALREKKFST-KSDVWSFGILLWEIYSFGR---VPYP--RIPLKDVVP 210
Query: 352 RLSDEGKVLQAGD 364
R+ ++G + A D
Sbjct: 211 RV-EKGYKMDAPD 222
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 97/224 (43%), Gaps = 22/224 (9%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGW 578
Q + + +FG G ++ V VK + K A F E + +LRH NLVQL G
Sbjct: 12 QTIGKGEFGDVMLGDYRGNK-VAVKCI---KNDATAQAFLAEASVMTQLRHSNLVQLLGV 67
Query: 579 CTEQ-GEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWN 637
E+ G + ++ +Y A L L G S+L + A+ YL
Sbjct: 68 IVEEKGGLYIVTEYMAKGSLVDYLRSR----GRSVLGGDCLLKFSLDVCEAMEYLE---G 120
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
+HR++ + + + D ++ F L ++A+S + + + +PE
Sbjct: 121 NNFVHRDLAARNVLVSEDNVAKVSDFGLT----------KEASSTQDTGKLPVKWTAPEA 170
Query: 698 IESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHE 741
+ + ++ +DV+SFG+++ E+ + R+P +V RV +
Sbjct: 171 LREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK 214
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 107/230 (46%), Gaps = 36/230 (15%)
Query: 119 LGSGGFGKVYRAVL-------PSDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHL-RHRN 169
LG G FG+V A P + VAVK L + E+ +E+ + + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVL-FRRPENLEAAAPLNWEQRKKII------- 221
++ L G C + L ++ +Y +L L RRP +E + +N +++
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 222 -RGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSS 280
LA + YL Q + IHRD+ NV++ ++ DFGLAR + + + Y +T++
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTN 218
Query: 281 ARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
R + ++ PE+ V T +SDV+SFG+++ E+ +
Sbjct: 219 GRL-------------PVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFT 254
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 109/238 (45%), Gaps = 32/238 (13%)
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLL----------FHNNHRIGHSILQWHH 617
+H+N++ L G CT+ G + VI +Y++ L L ++ +R+ + +
Sbjct: 99 KHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 618 RYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHR 677
+ LA + YL +++ IHR++ + + + + ++ F LA + D+ ++
Sbjct: 159 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY-YK 214
Query: 678 KATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVK 737
K T+G V+ +M+PE + T +DV+SFGV++ E+ T + +P L K
Sbjct: 215 KTTNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270
Query: 738 RVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
+ E +P +L + +MR C + P RP+ +Q++ LD
Sbjct: 271 LLKEGHRMDKPANCTNELYM--------MMR------DCWHAVPSQRPTFKQLVEDLD 314
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 109/234 (46%), Gaps = 35/234 (14%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK---GERFEKTFAAELVAVAHLRHRNLVRL 173
+ LG G FGKV A + G VA+K + +K + E+ + LRH ++++L
Sbjct: 20 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 79
Query: 174 RGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHE 233
+D++++V +Y N D ++ R ++ ++ ++ + + +A+ Y H
Sbjct: 80 YDVIKSKDEIIMVIEYAGNELFDYIVQRDK--------MSEQEARRFFQQIISAVEYCHR 131
Query: 234 QLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTR 293
+I+HRD+K N++LD N ++ DFGL+ + ++TS
Sbjct: 132 H---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD--GNFLKTSC------------- 173
Query: 294 IGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
G+ Y PE A + DV+S G V+L V+ RR L + D+ I +L
Sbjct: 174 --GSPNYAAPEVISGKLYAGPEVDVWSCG-VILYVMLCRR---LPFDDESIPVL 221
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 107/230 (46%), Gaps = 36/230 (15%)
Query: 119 LGSGGFGKVYRAVL-------PSDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHL-RHRN 169
LG G FG+V A P + VAVK L + E+ +E+ + + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVL-FRRPENLEAAAPLNWEQRKKII------- 221
++ L G C + L ++ +Y +L L RRP +E + +N +++
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 222 -RGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSS 280
LA + YL Q + IHRD+ NV++ ++ DFGLAR + + + Y +T++
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTN 218
Query: 281 ARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
R + ++ PE+ V T +SDV+SFG+++ E+ +
Sbjct: 219 GRL-------------PVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFT 254
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 109/238 (45%), Gaps = 32/238 (13%)
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLL----------FHNNHRIGHSILQWHH 617
+H+N++ L G CT+ G + VI +Y++ L L ++ +R+ + +
Sbjct: 99 KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 618 RYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHR 677
+ LA + YL +++ IHR++ + + + + ++ F LA + D+ ++
Sbjct: 159 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY-YK 214
Query: 678 KATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVK 737
K T+G V+ +M+PE + T +DV+SFGV++ E+ T + +P L K
Sbjct: 215 KTTNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270
Query: 738 RVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
+ E +P +L + +MR C + P RP+ +Q++ LD
Sbjct: 271 LLKEGHRMDKPANCTNELYM--------MMR------DCWHAVPSQRPTFKQLVEDLD 314
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 109/234 (46%), Gaps = 35/234 (14%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK---GERFEKTFAAELVAVAHLRHRNLVRL 173
+ LG G FGKV A + G VA+K + +K + E+ + LRH ++++L
Sbjct: 19 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 78
Query: 174 RGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHE 233
+D++++V +Y N D ++ R ++ ++ ++ + + +A+ Y H
Sbjct: 79 YDVIKSKDEIIMVIEYAGNELFDYIVQRDK--------MSEQEARRFFQQIISAVEYCHR 130
Query: 234 QLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTR 293
+I+HRD+K N++LD N ++ DFGL+ + ++TS
Sbjct: 131 H---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD--GNFLKTSC------------- 172
Query: 294 IGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
G+ Y PE A + DV+S G V+L V+ RR L + D+ I +L
Sbjct: 173 --GSPNYAAPEVISGKLYAGPEVDVWSCG-VILYVMLCRR---LPFDDESIPVL 220
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKCL--AEKGERFEKTFAAELVAVAHLRHRNLVRLRG 175
+G+G +G+ + SDG ++ K L E ++ +E+ + L+H N+VR
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 176 WCVHEDQ--LLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHE 233
+ L +V +Y L V+ + + + L+ E +++ L AL H
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY---LDEEFVLRVMTQLTLALKECHR 129
Query: 234 QLET--QIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
+ + ++HRD+K +NV LD + N +LGDFGLAR L H+ TS A+
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD------TSFAKA-------- 175
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
GT Y+ PE + S KSD++S G ++ E+ +
Sbjct: 176 --FVGTPYYMSPEQMNRMSY-NEKSDIWSLGCLLYELCA 211
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 640 VIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIE 699
V+HR++ + + LD N +LG F LA L + TS ++ G YMSPE +
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHD-------TSFAKAFVGTPYYMSPEQMN 189
Query: 700 SGEATSMADVYSFGVVVLEV 719
+D++S G ++ E+
Sbjct: 190 RMSYNEKSDIWSLGCLLYEL 209
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 109/234 (46%), Gaps = 35/234 (14%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK---GERFEKTFAAELVAVAHLRHRNLVRL 173
+ LG G FGKV A + G VA+K + +K + E+ + LRH ++++L
Sbjct: 10 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 69
Query: 174 RGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHE 233
+D++++V +Y N D ++ R ++ ++ ++ + + +A+ Y H
Sbjct: 70 YDVIKSKDEIIMVIEYAGNELFDYIVQRDK--------MSEQEARRFFQQIISAVEYCHR 121
Query: 234 QLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTR 293
+I+HRD+K N++LD N ++ DFGL+ + ++TS
Sbjct: 122 H---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD--GNFLKTSC------------- 163
Query: 294 IGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
G+ Y PE A + DV+S G V+L V+ RR L + D+ I +L
Sbjct: 164 --GSPNYAAPEVISGKLYAGPEVDVWSCG-VILYVMLCRR---LPFDDESIPVL 211
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 27/212 (12%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG+G FG V V A+K + E G E F E + +L H LV+L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDV-AIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
+ + ++ +YM N L L + +Q ++ + + A+ YL + Q
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQT------QQLLEMCKDVCEAMEYLESK---Q 125
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
+HRD+ N +++ Q ++ DFGL+R++ + +S+R +F +
Sbjct: 126 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-----EYTSSRGSKF----------PV 170
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ PPE S ++KSD+++FG+++ E+ S
Sbjct: 171 RWSPPEVLMY-SKFSSKSDIWAFGVLMWEIYS 201
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 82/169 (48%), Gaps = 15/169 (8%)
Query: 557 FSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWH 616
F E + + L H LVQL G CT+Q + +I +Y A L + L HR Q
Sbjct: 51 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-----FQTQ 105
Query: 617 HRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGH 676
+ K + A+ YL ++Q +HR++ + ++ ++ F L+ ++ +++
Sbjct: 106 QLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-- 160
Query: 677 RKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQM 724
+ +R + + PE + + +S +D+++FGV++ E+ + G+M
Sbjct: 161 ----TSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM 205
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 108/237 (45%), Gaps = 41/237 (17%)
Query: 117 EVLGSGGFGKVYRAV---LPSDGTV--VAVKCLAEKGERFEK-TFAAELVAVAHL-RHRN 169
+VLGSG FGKV A + G VAVK L EK + E+ +EL + L H N
Sbjct: 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSL-------------DRVLFRRPENLEAAAPLN--- 213
+V L G C + L+++Y L D + + + LE LN
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 170
Query: 214 WEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQ 273
+E +A + +L + +HRD+ NV++ ++ DFGLAR + +
Sbjct: 171 FEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN 227
Query: 274 YQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
Y +R ++ R+ + ++ PES +G + T KSDV+S+GI++ E+ S
Sbjct: 228 YVVRGNA------------RL--PVKWMAPESLFEG-IYTIKSDVWSYGILLWEIFS 269
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 85/200 (42%), Gaps = 26/200 (13%)
Query: 540 VLVKRLGMSKCPALRTRFSNELQNLARL-RHRNLVQLCGWCTEQGEMLVIYDYSATRILS 598
V VK L + R +EL+ + +L H N+V L G CT G + +I++Y L
Sbjct: 78 VAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLL 137
Query: 599 HLL-------------FHNNHRIGH----SILQWHHRYNIIKSLASAILYLHEEWNEQVI 641
+ L + N R+ ++L + +A + +L + +
Sbjct: 138 NYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCV 194
Query: 642 HRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESG 701
HR++ + + + ++ F LA + + + GN R +M+PE + G
Sbjct: 195 HRDLAARNVLVTHGKVVKICDFGLARDIMSDSN---YVVRGN--ARLPVKWMAPESLFEG 249
Query: 702 EATSMADVYSFGVVVLEVVT 721
T +DV+S+G+++ E+ +
Sbjct: 250 IYTIKSDVWSYGILLWEIFS 269
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 109/234 (46%), Gaps = 35/234 (14%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK---GERFEKTFAAELVAVAHLRHRNLVRL 173
+ LG G FGKV A + G VA+K + +K + E+ + LRH ++++L
Sbjct: 14 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 73
Query: 174 RGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHE 233
+D++++V +Y N D ++ R ++ ++ ++ + + +A+ Y H
Sbjct: 74 YDVIKSKDEIIMVIEYAGNELFDYIVQRDK--------MSEQEARRFFQQIISAVEYCHR 125
Query: 234 QLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTR 293
+I+HRD+K N++LD N ++ DFGL+ + ++TS
Sbjct: 126 H---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD--GNFLKTSC------------- 167
Query: 294 IGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
G+ Y PE A + DV+S G V+L V+ RR L + D+ I +L
Sbjct: 168 --GSPNYAAPEVISGKLYAGPEVDVWSCG-VILYVMLCRR---LPFDDESIPVL 215
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 29/214 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G FG+VY V VAVK L E E+ F E + ++H NLV+L G C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E ++ ++M +L L R E +A + +I ++A+ YL ++
Sbjct: 78 REPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQI----SSAMEYLEKK---N 129
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGT- 297
IHRD+ N ++ + ++ DFGL+R + + T G
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-----------------TXTAHAGAKF 172
Query: 298 -IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
I + PES + KSDV++FG+++ E+ +
Sbjct: 173 PIKWTAPESLAYNKFSI-KSDVWAFGVLLWEIAT 205
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 114/267 (42%), Gaps = 32/267 (11%)
Query: 526 FGTAYQGFLDNHQY-VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGE 584
FG Y+G + V VK L F E + ++H NLVQL G CT +
Sbjct: 24 FGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVCTREPP 81
Query: 585 MLVIYDY-SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHR 643
+I ++ + +L +L N + +L + + ++SA+ YL + + IHR
Sbjct: 82 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSAMEYLEK---KNFIHR 133
Query: 644 NITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEA 703
++ + + + ++ F L+ +T + + + + + +PE + +
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMTGD------TXTAHAGAKFPIKWTAPESLAYNKF 187
Query: 704 TSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNH 763
+ +DV++FGV++ E+ T M+ P G+ +V+ EL++ E
Sbjct: 188 SIKSDVWAFGVLLWEIATYGMS---PYP-GIDPSQVY----------ELLEKDYRMERPE 233
Query: 764 KELMRLIKLGIACTLSNPELRPSMRQI 790
++ +L AC NP RPS +I
Sbjct: 234 GCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 26/212 (12%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG+G FG+V+ ++ T VAVK L + G + F E + L+H LVRL
Sbjct: 20 LGAGQFGEVWMGYY-NNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E+ + ++ ++M SL L + E + P + +I G+A Y+ +
Sbjct: 78 KEEPIYIITEFMAKGSLLDFL-KSDEGGKVLLPKLIDFSAQIAEGMA----YIERK---N 129
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
IHRD++ +NV++ ++ DFGLAR +E ++++ E + I
Sbjct: 130 YIHRDLRAANVLVSESLMCKIADFGLARVIE-------------DNEYTAREGAKF--PI 174
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ PE+ G T KS+V+SFGI++ E+V+
Sbjct: 175 KWTAPEAINFGCF-TIKSNVWSFGILLYEIVT 205
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 90/203 (44%), Gaps = 15/203 (7%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGW 578
+++ FG + G+ +N V VK L F E + L+H LV+L
Sbjct: 18 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSV--QAFLEEANLMKTLQHDKLVRLYAV 75
Query: 579 CTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNE 638
T++ + +I ++ A S L F + G +L + +A + Y+ +
Sbjct: 76 VTKEEPIYIITEFMAKG--SLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIE---RK 128
Query: 639 QVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYI 698
IHR++ ++ + + + ++ F LA + N++ R+ + + +PE I
Sbjct: 129 NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGA------KFPIKWTAPEAI 182
Query: 699 ESGEATSMADVYSFGVVVLEVVT 721
G T ++V+SFG+++ E+VT
Sbjct: 183 NFGCFTIKSNVWSFGILLYEIVT 205
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 113/244 (46%), Gaps = 38/244 (15%)
Query: 94 GGDNPRIFSYAEL-YIGSNGFDEDEVLGSGGFGKV----YRAVLPSDGTVVAVKCLAEKG 148
G +P IF L YI LG G FG V Y + + G +VAVK L G
Sbjct: 1 GPQDPTIFEERHLKYISQ--------LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG 52
Query: 149 ERFEKTFAAELVAVAHLRHRNLVRLRG--WCVHEDQLLLVYDYMPNRSLDRVLFRRPENL 206
++ F E+ + L +V+ RG + L LV +Y+P+ L L R L
Sbjct: 53 PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL 112
Query: 207 EAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266
+A+ L + +I +G+ YL + + +HRD+ N++++S+ + ++ DFGLA+
Sbjct: 113 DASRLLLYS--SQICKGM----EYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAK 163
Query: 267 WLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVL 326
L + Y + ++ F A PES ++ + +SDV+SFG+V+
Sbjct: 164 LLPLDKDYYVVREPGQSPIFWYA-------------PESLSD-NIFSRQSDVWSFGVVLY 209
Query: 327 EVVS 330
E+ +
Sbjct: 210 ELFT 213
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 81/184 (44%), Gaps = 15/184 (8%)
Query: 540 VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQG--EMLVIYDYSATRIL 597
V VK+L S P + F E+Q L L +V+ G G + ++ +Y + L
Sbjct: 43 VAVKQLQHSG-PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCL 101
Query: 598 SHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMN 657
L + R+ S L + + + YL + + +HR++ + I ++ + +
Sbjct: 102 RDFLQRHRARLDASRLLLYS-----SQICKGMEYLG---SRRCVHRDLAARNILVESEAH 153
Query: 658 PRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVL 717
++ F LA+ L + + G IF Y +PE + + +DV+SFGVV+
Sbjct: 154 VKIADFGLAKLLPLDKDYYVVREPGQSP---IFWY-APESLSDNIFSRQSDVWSFGVVLY 209
Query: 718 EVVT 721
E+ T
Sbjct: 210 ELFT 213
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 107/230 (46%), Gaps = 36/230 (15%)
Query: 119 LGSGGFGKVYRAVL-------PSDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHL-RHRN 169
LG G FG+V A P + VAVK L + E+ +E+ + + +H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVL-FRRPENLEAAAPLNWEQRKKII------- 221
++ L G C + L ++ +Y +L L RRP +E + +N +++
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 222 -RGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSS 280
LA + YL Q + IHRD+ NV++ ++ DFGLAR + + + Y +T++
Sbjct: 152 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTN 207
Query: 281 ARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
R + ++ PE+ V T +SDV+SFG+++ E+ +
Sbjct: 208 GRL-------------PVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFT 243
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 109/238 (45%), Gaps = 32/238 (13%)
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLL----------FHNNHRIGHSILQWHH 617
+H+N++ L G CT+ G + VI +Y++ L L ++ +R+ + +
Sbjct: 88 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 618 RYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHR 677
+ LA + YL +++ IHR++ + + + + ++ F LA + D+ ++
Sbjct: 148 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY-YK 203
Query: 678 KATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVK 737
K T+G V+ +M+PE + T +DV+SFGV++ E+ T + +P L K
Sbjct: 204 KTTNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 259
Query: 738 RVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
+ E +P +L + +MR C + P RP+ +Q++ LD
Sbjct: 260 LLKEGHRMDKPANCTNELYM--------MMR------DCWHAVPSQRPTFKQLVEDLD 303
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 107/230 (46%), Gaps = 36/230 (15%)
Query: 119 LGSGGFGKVYRAVL-------PSDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHL-RHRN 169
LG G FG+V A P + VAVK L + E+ +E+ + + +H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVL-FRRPENLEAAAPLNWEQRKKII------- 221
++ L G C + L ++ +Y +L L RRP +E + +N +++
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 222 -RGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSS 280
LA + YL Q + IHRD+ NV++ ++ DFGLAR + + + Y +T++
Sbjct: 150 TYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTN 205
Query: 281 ARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
R + ++ PE+ V T +SDV+SFG+++ E+ +
Sbjct: 206 GR-------------LPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFT 241
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 110/238 (46%), Gaps = 32/238 (13%)
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLL----------FHNNHRIGHSILQWHH 617
+H+N++ L G CT+ G + VI +Y++ L L ++ +R+ + +
Sbjct: 86 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 618 RYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHR 677
+ LA + YL +++ IHR++T+ + + + ++ F LA + D+ ++
Sbjct: 146 LVSCTYQLARGMEYLA---SQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDY-YK 201
Query: 678 KATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVK 737
K T+G V+ +M+PE + T +DV+SFGV++ E+ T + +P L K
Sbjct: 202 KTTNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 257
Query: 738 RVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
+ E +P +L + +MR C + P RP+ +Q++ LD
Sbjct: 258 LLKEGHRMDKPANCTNELYM--------MMR------DCWHAVPSQRPTFKQLVEDLD 301
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 36/230 (15%)
Query: 119 LGSGGFGKVYRAVL-------PSDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHL-RHRN 169
LG G FG+V A P + VAVK L + E +E+ + + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVL-FRRPENLEAAAPLNWEQRKKII------- 221
++ L G C + L ++ +Y +L L RRP +E + +N +++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 222 -RGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSS 280
LA + YL Q + IHRD+ NV++ ++ DFGLAR + + + Y +T++
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTN 218
Query: 281 ARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
R + ++ PE+ V T +SDV+SFG+++ E+ +
Sbjct: 219 GRL-------------PVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFT 254
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 109/238 (45%), Gaps = 32/238 (13%)
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLL----------FHNNHRIGHSILQWHH 617
+H+N++ L G CT+ G + VI +Y++ L L ++ +R+ + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 618 RYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHR 677
+ LA + YL +++ IHR++ + + + + ++ F LA + D+ ++
Sbjct: 159 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY-YK 214
Query: 678 KATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVK 737
K T+G V+ +M+PE + T +DV+SFGV++ E+ T + +P L K
Sbjct: 215 KTTNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270
Query: 738 RVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
+ E +P +L + +MR C + P RP+ +Q++ LD
Sbjct: 271 LLKEGHRMDKPANCTNELYM--------MMR------DCWHAVPSQRPTFKQLVEDLD 314
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 107/230 (46%), Gaps = 36/230 (15%)
Query: 119 LGSGGFGKVYRAVL-------PSDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHL-RHRN 169
LG G FG+V A P + VAVK L + E+ +E+ + + +H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVL-FRRPENLEAAAPLNWEQRKKII------- 221
++ L G C + L ++ +Y +L L RRP +E + +N +++
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 222 -RGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSS 280
LA + YL Q + IHRD+ NV++ ++ DFGLAR + + + Y +T++
Sbjct: 155 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTN 210
Query: 281 ARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
R + ++ PE+ V T +SDV+SFG+++ E+ +
Sbjct: 211 GRL-------------PVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFT 246
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 109/238 (45%), Gaps = 32/238 (13%)
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLL----------FHNNHRIGHSILQWHH 617
+H+N++ L G CT+ G + VI +Y++ L L ++ +R+ + +
Sbjct: 91 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 618 RYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHR 677
+ LA + YL +++ IHR++ + + + + ++ F LA + D+ ++
Sbjct: 151 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY-YK 206
Query: 678 KATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVK 737
K T+G V+ +M+PE + T +DV+SFGV++ E+ T + +P L K
Sbjct: 207 KTTNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 262
Query: 738 RVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
+ E +P +L + +MR C + P RP+ +Q++ LD
Sbjct: 263 LLKEGHRMDKPANCTNELYM--------MMR------DCWHAVPSQRPTFKQLVEDLD 306
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 36/230 (15%)
Query: 119 LGSGGFGKVYRAVL-------PSDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHL-RHRN 169
LG G FG+V A P + VAVK L + E+ +E+ + + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVL-FRRPENLEAAAPLNWEQRKKII------- 221
++ L G C + L ++ +Y +L L RRP +E + +N +++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 222 -RGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSS 280
LA + YL Q + IHRD+ NV++ ++ DFGLAR + + + Y T++
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKNTTN 218
Query: 281 ARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
R + ++ PE+ V T +SDV+SFG+++ E+ +
Sbjct: 219 GRL-------------PVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFT 254
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 108/238 (45%), Gaps = 32/238 (13%)
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLL----------FHNNHRIGHSILQWHH 617
+H+N++ L G CT+ G + VI +Y++ L L ++ +R+ + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 618 RYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHR 677
+ LA + YL +++ IHR++ + + + + ++ F LA + D+ ++
Sbjct: 159 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY-YK 214
Query: 678 KATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVK 737
T+G V+ +M+PE + T +DV+SFGV++ E+ T + +P L K
Sbjct: 215 NTTNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270
Query: 738 RVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
+ E +P +L + +MR C + P RP+ +Q++ LD
Sbjct: 271 LLKEGHRMDKPANCTNELYM--------MMR------DCWHAVPSQRPTFKQLVEDLD 314
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 36/230 (15%)
Query: 119 LGSGGFGKVYRAVL-------PSDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHL-RHRN 169
LG G FG+V A P + VAVK L + E+ +E+ + + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVL-FRRPENLEAAAPLNWEQRKKII------- 221
++ L G C + L ++ Y +L L RRP +E + +N +++
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 222 -RGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSS 280
LA + YL Q + IHRD+ NV++ ++ DFGLAR + + + Y +T++
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTN 218
Query: 281 ARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
R + ++ PE+ V T +SDV+SFG+++ E+ +
Sbjct: 219 GRL-------------PVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFT 254
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 108/238 (45%), Gaps = 32/238 (13%)
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLL----------FHNNHRIGHSILQWHH 617
+H+N++ L G CT+ G + VI Y++ L L ++ +R+ + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 618 RYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHR 677
+ LA + YL +++ IHR++ + + + + ++ F LA + D+ ++
Sbjct: 159 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY-YK 214
Query: 678 KATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVK 737
K T+G V+ +M+PE + T +DV+SFGV++ E+ T + +P L K
Sbjct: 215 KTTNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270
Query: 738 RVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
+ E +P +L + +MR C + P RP+ +Q++ LD
Sbjct: 271 LLKEGHRMDKPANCTNELYM--------MMR------DCWHAVPSQRPTFKQLVEDLD 314
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 100/219 (45%), Gaps = 26/219 (11%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKCL--AEKGERFEKTFAAELVAVAHLRHRNLVRLRG 175
+G+G +G+ + SDG ++ K L E ++ +E+ + L+H N+VR
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 176 WCVHEDQ--LLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHE 233
+ L +V +Y L V+ + + + L+ E +++ L AL H
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY---LDEEFVLRVMTQLTLALKECHR 129
Query: 234 QLET--QIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
+ + ++HRD+K +NV LD + N +LGDFGLAR L H+ +
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDF----------------A 173
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
GT Y+ PE + S KSD++S G ++ E+ +
Sbjct: 174 KEFVGTPYYMSPEQMNRMSY-NEKSDIWSLGCLLYELCA 211
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 640 VIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIE 699
V+HR++ + + LD N +LG F LA L ++ ++ G YMSPE +
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFV-------GTPYYMSPEQMN 189
Query: 700 SGEATSMADVYSFGVVVLEV 719
+D++S G ++ E+
Sbjct: 190 RMSYNEKSDIWSLGCLLYEL 209
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 25/212 (11%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G +G+VY V VAVK L E E+ F E + ++H NLV+L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E ++ ++M +L L R E +A + +I ++A+ YL ++
Sbjct: 80 REPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQI----SSAMEYLEKK---N 131
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
IHRD+ N ++ + ++ DFGL+R + + + H I T
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLM-----------TGDTYTAHAGAKFPIKWT- 179
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PES + KSDV++FG+++ E+ +
Sbjct: 180 ---APESLAYNKFSI-KSDVWAFGVLLWEIAT 207
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 526 FGTAYQGFLDNHQY-VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGE 584
+G Y+G + V VK L F E + ++H NLVQL G CT +
Sbjct: 26 YGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVCTREPP 83
Query: 585 MLVIYDY-SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHR 643
+I ++ + +L +L N + +L + + ++SA+ YL + + IHR
Sbjct: 84 FYIIIEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSAMEYLEK---KNFIHR 135
Query: 644 NITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEA 703
++ + + + ++ F L+ +T + + + + + + +PE + +
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAKFPIKWTAPESLAYNKF 189
Query: 704 TSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNH 763
+ +DV++FGV++ E+ T M+ P G+ + +V+ EL++ E
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMS---PYP-GIDLSQVY----------ELLEKDYRMERPE 235
Query: 764 KELMRLIKLGIACTLSNPELRPSMRQI 790
++ +L AC NP RPS +I
Sbjct: 236 GCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 105/235 (44%), Gaps = 28/235 (11%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVR 172
FD E LG G +G VY+A+ G +VA+K + + + E E+ + ++V+
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQE--IIKEISIMQQCDSPHVVK 88
Query: 173 LRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
G L +V +Y S+ ++ R + L ++ I++ L YLH
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTE------DEIATILQSTLKGLEYLH 142
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETT 292
+ IHRD+K N++L+++ +A+L DFG+A L +A+
Sbjct: 143 FMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQLTD----------------XMAKRN 183
Query: 293 RIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
+ GT ++ PE Q+ +D++S GI +E+ G+ +P I ++
Sbjct: 184 XVIGTPFWMAPEVIQEIGYNCV-ADIWSLGITAIEMAEGKPPYADIHPMRAIFMI 237
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 93/210 (44%), Gaps = 19/210 (9%)
Query: 515 FSESQRVAEMDFGTAYQGF-LDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLV 573
F +++ E +G+ Y+ + Q V +K++ + + E+ + + ++V
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE---SDLQEIIKEISIMQQCDSPHVV 87
Query: 574 QLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLH 633
+ G + ++ ++ +Y +S ++ R+ + L I++S + YLH
Sbjct: 88 KYYGSYFKNTDLWIVMEYCGAGSVSDII-----RLRNKTLTEDEIATILQSTLKGLEYLH 142
Query: 634 EEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYM 693
+ IHR+I + I L+ + + +L F +A LT + V G +M
Sbjct: 143 ---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLT-------DXMAKRNXVIGTPFWM 192
Query: 694 SPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
+PE I+ +AD++S G+ +E+ G+
Sbjct: 193 APEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 104/221 (47%), Gaps = 36/221 (16%)
Query: 119 LGSGGFGKV----YRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLVRL 173
LG G FGKV Y G +VAVK L A+ G + + E+ + L H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 174 RGWCVHEDQ----LLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
+G C EDQ L LV +Y+P SL L R L A L + Q +I G+A
Sbjct: 82 KGCC--EDQGEKSLQLVMEYVPLGSLRDYLPRHSIGL--AQLLLFAQ--QICEGMA---- 131
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
YLH Q IHR++ NV+LD+ ++GDFGLA+ + +Y + F A
Sbjct: 132 YLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 188
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PE ++ A SDV+SFG+ + E+++
Sbjct: 189 -------------PECLKEYKFYYA-SDVWSFGVTLYELLT 215
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 16/184 (8%)
Query: 540 VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGE--MLVIYDYSATRIL 597
V VK L P R+ + E+ L L H ++++ G C +QGE + ++ +Y L
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
Query: 598 SHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMN 657
L H IG + L + + + YLH ++ IHRN+ + + LD D
Sbjct: 106 RDYL--PRHSIGLAQLLL-----FAQQICEGMAYLH---SQHYIHRNLAARNVLLDNDRL 155
Query: 658 PRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVL 717
++G F LA+ + +R G+ V F Y +PE ++ + +DV+SFGV +
Sbjct: 156 VKIGDFGLAKAVPEGHEYYRVREDGDSPV---FWY-APECLKEYKFYYASDVWSFGVTLY 211
Query: 718 EVVT 721
E++T
Sbjct: 212 ELLT 215
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 36/230 (15%)
Query: 119 LGSGGFGKVYRAVL-------PSDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHL-RHRN 169
LG G FG+V A P + VAVK L + E+ +E+ + + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVL-FRRPENLEAAAPLNWEQRKKII------- 221
++ L G C + L ++ Y +L L RRP +E + +N +++
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 222 -RGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSS 280
LA + YL Q + IHRD+ NV++ ++ DFGLAR + + + Y +T++
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTN 218
Query: 281 ARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
R + ++ PE+ V T +SDV+SFG+++ E+ +
Sbjct: 219 GRL-------------PVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFT 254
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 108/238 (45%), Gaps = 32/238 (13%)
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLL----------FHNNHRIGHSILQWHH 617
+H+N++ L G CT+ G + VI Y++ L L ++ +R+ + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 618 RYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHR 677
+ LA + YL +++ IHR++ + + + + ++ F LA + D+ ++
Sbjct: 159 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY-YK 214
Query: 678 KATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVK 737
K T+G V+ +M+PE + T +DV+SFGV++ E+ T + +P L K
Sbjct: 215 KTTNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270
Query: 738 RVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
+ E +P +L + +MR C + P RP+ +Q++ LD
Sbjct: 271 LLKEGHRMDKPANCTNELYM--------MMR------DCWHAVPSQRPTFKQLVEDLD 314
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 107/230 (46%), Gaps = 36/230 (15%)
Query: 119 LGSGGFGKVYRAVL-------PSDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHL-RHRN 169
LG G FG+V A P + VAVK L + E+ +E+ + + +H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVL-FRRPENLEAAAPLNWEQRKKII------- 221
++ L G C + L ++ +Y +L L RRP +E + +N +++
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 222 -RGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSS 280
LA + YL Q + IHRD+ NV++ ++ DFGLAR + + + Y +T++
Sbjct: 209 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTN 264
Query: 281 ARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
R + ++ PE+ V T +SDV+SFG+++ E+ +
Sbjct: 265 GR-------------LPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFT 300
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 109/238 (45%), Gaps = 32/238 (13%)
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLL----------FHNNHRIGHSILQWHH 617
+H+N++ L G CT+ G + VI +Y++ L L ++ +R+ + +
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 618 RYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHR 677
+ LA + YL +++ IHR++ + + + + ++ F LA + D+ ++
Sbjct: 205 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY-YK 260
Query: 678 KATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVK 737
K T+G V+ +M+PE + T +DV+SFGV++ E+ T + +P L K
Sbjct: 261 KTTNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 316
Query: 738 RVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
+ E +P +L + +MR C + P RP+ +Q++ LD
Sbjct: 317 LLKEGHRMDKPANCTNELYM--------MMR------DCWHAVPSQRPTFKQLVEDLD 360
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 29/214 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G +G+VY V VAVK L E E+ F E + ++H NLV+L G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E ++ ++M +L L R E +A + +I ++A+ YL ++
Sbjct: 85 REPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQI----SSAMEYLEKK---N 136
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
IHRD+ N ++ + ++ DFGL+R + + + H I T
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLM-----------TGDTYTAHAGAKFPIKWTA 185
Query: 299 GYLPPES--FQKGSVATAKSDVFSFGIVVLEVVS 330
PES + K S+ KSDV++FG+++ E+ +
Sbjct: 186 ----PESLAYNKFSI---KSDVWAFGVLLWEIAT 212
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 526 FGTAYQGFLDNHQY-VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGE 584
+G Y+G + V VK L F E + ++H NLVQL G CT +
Sbjct: 31 YGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVCTREPP 88
Query: 585 MLVIYDY-SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHR 643
+I ++ + +L +L N + +L + + ++SA+ YL + + IHR
Sbjct: 89 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSAMEYLEK---KNFIHR 140
Query: 644 NITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEA 703
++ + + + ++ F L+ +T + + + + + + +PE + +
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAKFPIKWTAPESLAYNKF 194
Query: 704 TSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNH 763
+ +DV++FGV++ E+ T M+ P G+ + +V+ EL++ E
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMS---PYP-GIDLSQVY----------ELLEKDYRMERPE 240
Query: 764 KELMRLIKLGIACTLSNPELRPSMRQI 790
++ +L AC NP RPS +I
Sbjct: 241 GCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 123/303 (40%), Gaps = 57/303 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTV-------VAVKCLAEKGERFEKT-FAAELVAVAHLRHRNL 170
LG G FG VY V + G V VA+K + E E+ F E + ++
Sbjct: 18 LGQGSFGMVYEGV--AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 75
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFR-RPE--NLEAAAPLNWEQRKKIIRGLAAA 227
VRL G L++ + M L L RPE N AP + + ++ +A
Sbjct: 76 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 135
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
+ YL+ + +HRD+ N M+ + ++GDFG+ R +
Sbjct: 136 MAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE----------------- 175
Query: 288 LAETTRIGGTIGYLP-----PESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDD 342
+ R GG G LP PES + G V T SDV+SFG+V+ E+ + ++
Sbjct: 176 -TDXXRKGGK-GLLPVRWMSPESLKDG-VFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 232
Query: 343 QIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEXXXXXXXXXXXXNPHLRPSMKWVI 402
Q++ R EG +L DN D +L M NP +RPS +I
Sbjct: 233 QVL------RFVMEGGLLDKPDN-CPDMLLELMRM---------CWQYNPKMRPSFLEII 276
Query: 403 EAV 405
++
Sbjct: 277 SSI 279
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 126/307 (41%), Gaps = 40/307 (13%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFL------DNHQYVLVKRLGMSKCPALRTRFSNELQNL 564
A + S+ + + FG Y+G + V +K + + R F NE +
Sbjct: 8 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 67
Query: 565 ARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLL------FHNNHRIGHSILQWHHR 618
++V+L G ++ LVI + L L NN + L
Sbjct: 68 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KM 125
Query: 619 YNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRK 678
+ +A + YL+ + +HR++ + + D ++G F + + D RK
Sbjct: 126 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDX-XRK 181
Query: 679 ATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKR 738
G VR +MSPE ++ G T+ +DV+SFGVV+ E+ T + + +GL ++
Sbjct: 182 GGKGLLPVR----WMSPESLKDGVFTTYSDVWSFGVVLWEIAT----LAEQPYQGLSNEQ 233
Query: 739 VHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGND 798
V F L+D N ELMR+ C NP++RPS +I+S +
Sbjct: 234 VLRFVME----GGLLDKPDNCPDMLLELMRM------CWQYNPKMRPSFLEIISSI---- 279
Query: 799 KRFMEDG 805
K ME G
Sbjct: 280 KEEMEPG 286
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 29/218 (13%)
Query: 119 LGSGGFGKV----YRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLR 174
LG G FG V Y + + G +VAVK L G ++ F E+ + L +V+ R
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 175 G--WCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
G + L LV +Y+P+ L L R L+A+ L + +I +G+ YL
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYS--SQICKGM----EYLG 131
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETT 292
+ + +HRD+ N++++S+ + ++ DFGLA+ L + Y + ++ F A
Sbjct: 132 SR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA--- 185
Query: 293 RIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PES ++ + +SDV+SFG+V+ E+ +
Sbjct: 186 ----------PESLSD-NIFSRQSDVWSFGVVLYELFT 212
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 81/184 (44%), Gaps = 15/184 (8%)
Query: 540 VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQG--EMLVIYDYSATRIL 597
V VK+L S P + F E+Q L L +V+ G G + ++ +Y + L
Sbjct: 42 VAVKQLQHSG-PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCL 100
Query: 598 SHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMN 657
L + R+ S L + + + YL + + +HR++ + I ++ + +
Sbjct: 101 RDFLQRHRARLDASRLLLYS-----SQICKGMEYLG---SRRCVHRDLAARNILVESEAH 152
Query: 658 PRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVL 717
++ F LA+ L + + G IF Y +PE + + +DV+SFGVV+
Sbjct: 153 VKIADFGLAKLLPLDKDYYVVREPGQSP---IFWY-APESLSDNIFSRQSDVWSFGVVLY 208
Query: 718 EVVT 721
E+ T
Sbjct: 209 ELFT 212
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 25/212 (11%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G +G+VY V VAVK L E E+ F E + ++H NLV+L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E ++ ++M +L L R E +A + +I ++A+ YL ++
Sbjct: 80 REPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQI----SSAMEYLEKK---N 131
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
IHRD+ N ++ + ++ DFGL+R + + + H I T
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLM-----------TGDTYTAHAGAKFPIKWT- 179
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PES + KSDV++FG+++ E+ +
Sbjct: 180 ---APESLAYNKFSI-KSDVWAFGVLLWEIAT 207
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 526 FGTAYQGFLDNHQY-VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGE 584
+G Y+G + V VK L F E + ++H NLVQL G CT +
Sbjct: 26 YGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVCTREPP 83
Query: 585 MLVIYDY-SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHR 643
+I ++ + +L +L N + +L + + ++SA+ YL + + IHR
Sbjct: 84 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSAMEYLEK---KNFIHR 135
Query: 644 NITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEA 703
++ + + + ++ F L+ +T + + + + + + +PE + +
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAKFPIKWTAPESLAYNKF 189
Query: 704 TSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNH 763
+ +DV++FGV++ E+ T M+ P G+ + +V+ EL++ E
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMS---PYP-GIDLSQVY----------ELLEKDYRMERPE 235
Query: 764 KELMRLIKLGIACTLSNPELRPSMRQI 790
++ +L AC NP RPS +I
Sbjct: 236 GCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 112/239 (46%), Gaps = 41/239 (17%)
Query: 99 RIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDG----TVVAVKCLAEKGERFEKT 154
RIF EL + +VLGSG FG V++ V +G V +K + +K R ++
Sbjct: 8 RIFKETEL-------RKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR--QS 58
Query: 155 FAA---ELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAP 211
F A ++A+ L H ++VRL G C L LV Y+P SL + + L
Sbjct: 59 FQAVTDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLL 117
Query: 212 LNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHE 271
LNW + +A ++YL E ++HR++ NV+L S ++ DFG+A L +
Sbjct: 118 LNWGVQ------IAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168
Query: 272 LQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
Q+ S A+ I ++ ES G T +SDV+S+G+ V E+++
Sbjct: 169 -DKQLLYSEAKT-------------PIKWMALESIHFGKY-THQSDVWSYGVTVWELMT 212
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 72/164 (43%), Gaps = 14/164 (8%)
Query: 558 SNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHH 617
++ + + L H ++V+L G C LV +L H+ H +L W
Sbjct: 63 TDHMLAIGSLDHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGV 122
Query: 618 RYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHR 677
+ +A + YL E ++HRN+ + + L ++ F +A+ L +D
Sbjct: 123 Q------IAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLL 173
Query: 678 KATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
+ + + +M+ E I G+ T +DV+S+GV V E++T
Sbjct: 174 YSEA-----KTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 104/221 (47%), Gaps = 36/221 (16%)
Query: 119 LGSGGFGKV----YRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLVRL 173
LG G FGKV Y G +VAVK L A+ G + + E+ + L H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 174 RGWCVHEDQ----LLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
+G C EDQ L LV +Y+P SL L R L A L + Q +I G+A
Sbjct: 82 KGCC--EDQGEKSLQLVMEYVPLGSLRDYLPRHSIGL--AQLLLFAQ--QICEGMA---- 131
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
YLH Q IHR++ NV+LD+ ++GDFGLA+ + +Y + F A
Sbjct: 132 YLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 188
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PE ++ A SDV+SFG+ + E+++
Sbjct: 189 -------------PECLKEYKFYYA-SDVWSFGVTLYELLT 215
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 16/184 (8%)
Query: 540 VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGE--MLVIYDYSATRIL 597
V VK L P R+ + E+ L L H ++++ G C +QGE + ++ +Y L
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
Query: 598 SHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMN 657
L H IG + L + + + YLH + IHRN+ + + LD D
Sbjct: 106 RDYL--PRHSIGLAQLLL-----FAQQICEGMAYLHAQ---HYIHRNLAARNVLLDNDRL 155
Query: 658 PRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVL 717
++G F LA+ + +R G+ V F Y +PE ++ + +DV+SFGV +
Sbjct: 156 VKIGDFGLAKAVPEGHEYYRVREDGDSPV---FWY-APECLKEYKFYYASDVWSFGVTLY 211
Query: 718 EVVT 721
E++T
Sbjct: 212 ELLT 215
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 25/212 (11%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G +G+VY V VAVK L E E+ F E + ++H NLV+L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E ++ ++M +L L R E +A + +I ++A+ YL ++
Sbjct: 80 REPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQI----SSAMEYLEKK---N 131
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
IHRD+ N ++ + ++ DFGL+R + + + H I T
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLM-----------TGDTYTAHAGAKFPIKWT- 179
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PES + KSDV++FG+++ E+ +
Sbjct: 180 ---APESLAYNKFSI-KSDVWAFGVLLWEIAT 207
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 526 FGTAYQGFLDNHQY-VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGE 584
+G Y+G + V VK L F E + ++H NLVQL G CT +
Sbjct: 26 YGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVCTREPP 83
Query: 585 MLVIYDY-SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHR 643
+I ++ + +L +L N + +L + + ++SA+ YL + + IHR
Sbjct: 84 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSAMEYLEK---KNFIHR 135
Query: 644 NITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEA 703
++ + + + ++ F L+ +T + + + + + + +PE + +
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAKFPIKWTAPESLAYNKF 189
Query: 704 TSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNH 763
+ +DV++FGV++ E+ T M+ P G+ + +V+ EL++ E
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMS---PYP-GIDLSQVY----------ELLEKDYRMERPE 235
Query: 764 KELMRLIKLGIACTLSNPELRPSMRQI 790
++ +L AC NP RPS +I
Sbjct: 236 GCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 29/218 (13%)
Query: 119 LGSGGFGKV----YRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLR 174
LG G FG V Y + + G +VAVK L G ++ F E+ + L +V+ R
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 175 G--WCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
G + L LV +Y+P+ L L R L+A+ L + +I +G+ YL
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYS--SQICKGM----EYLG 144
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETT 292
+ + +HRD+ N++++S+ + ++ DFGLA+ L + Y + ++ F A
Sbjct: 145 SR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA--- 198
Query: 293 RIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PES ++ + +SDV+SFG+V+ E+ +
Sbjct: 199 ----------PESLSD-NIFSRQSDVWSFGVVLYELFT 225
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 81/184 (44%), Gaps = 15/184 (8%)
Query: 540 VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQG--EMLVIYDYSATRIL 597
V VK+L S P + F E+Q L L +V+ G G + ++ +Y + L
Sbjct: 55 VAVKQLQHSG-PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCL 113
Query: 598 SHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMN 657
L + R+ S L + + + YL + + +HR++ + I ++ + +
Sbjct: 114 RDFLQRHRARLDASRLLLYS-----SQICKGMEYLG---SRRCVHRDLAARNILVESEAH 165
Query: 658 PRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVL 717
++ F LA+ L + + G IF Y +PE + + +DV+SFGVV+
Sbjct: 166 VKIADFGLAKLLPLDKDYYVVREPGQSP---IFWY-APESLSDNIFSRQSDVWSFGVVLY 221
Query: 718 EVVT 721
E+ T
Sbjct: 222 ELFT 225
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 31/214 (14%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG+G FG V V A+K + E G E F E + +L H LV+L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDV-AIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
+ + ++ +YM N L L + +Q ++ + + A+ YL + Q
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQT------QQLLEMCKDVCEAMEYLESK---Q 140
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGT- 297
+HRD+ N +++ Q ++ DFGL+R++ + ET+ +G
Sbjct: 141 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-----------------EETSSVGSKF 183
Query: 298 -IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ + PPE S ++KSD+++FG+++ E+ S
Sbjct: 184 PVRWSPPEVLMY-SKFSSKSDIWAFGVLMWEIYS 216
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 15/169 (8%)
Query: 557 FSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWH 616
F E + + L H LVQL G CT+Q + +I +Y A L + L HR Q
Sbjct: 66 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-----FQTQ 120
Query: 617 HRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGH 676
+ K + A+ YL ++Q +HR++ + ++ ++ F L+ ++ D
Sbjct: 121 QLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL--DDEE 175
Query: 677 RKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQM 724
+ VR + PE + + +S +D+++FGV++ E+ + G+M
Sbjct: 176 TSSVGSKFPVR----WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM 220
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 25/212 (11%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G +G+VY V VAVK L E E+ F E + ++H NLV+L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E ++ ++M +L L R E +A + +I ++A+ YL ++
Sbjct: 80 REPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQI----SSAMEYLEKK---N 131
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
IHRD+ N ++ + ++ DFGL+R + + + H I T
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLM-----------TGDTYTAHAGAKFPIKWT- 179
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PES + KSDV++FG+++ E+ +
Sbjct: 180 ---APESLAYNKFSI-KSDVWAFGVLLWEIAT 207
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 526 FGTAYQGFLDNHQY-VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGE 584
+G Y+G + V VK L F E + ++H NLVQL G CT +
Sbjct: 26 YGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVCTREPP 83
Query: 585 MLVIYDY-SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHR 643
+I ++ + +L +L N + +L + + ++SA+ YL + + IHR
Sbjct: 84 FYIIIEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSAMEYLEK---KNFIHR 135
Query: 644 NITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEA 703
++ + + + ++ F L+ +T + + + + + + +PE + +
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAKFPIKWTAPESLAYNKF 189
Query: 704 TSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNH 763
+ +DV++FGV++ E+ T M+ P G+ + +V+ EL++ E
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMS---PYP-GIDLSQVY----------ELLEKDYRMERPE 235
Query: 764 KELMRLIKLGIACTLSNPELRPSMRQI 790
++ +L AC NP RPS +I
Sbjct: 236 GCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 29/214 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G +G+VY V VAVK L E E+ F E + ++H NLV+L G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E ++ ++M +L L R E +A + +I ++A+ YL ++
Sbjct: 78 REPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQI----SSAMEYLEKK---N 129
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGG-- 296
IHRD+ N ++ + ++ DFGL+R + + T G
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-----------------TXTAHAGAKF 172
Query: 297 TIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
I + PES + KSDV++FG+++ E+ +
Sbjct: 173 PIKWTAPESLAYNKFSI-KSDVWAFGVLLWEIAT 205
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 114/267 (42%), Gaps = 32/267 (11%)
Query: 526 FGTAYQGFLDNHQY-VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGE 584
+G Y+G + V VK L F E + ++H NLVQL G CT +
Sbjct: 24 YGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVCTREPP 81
Query: 585 MLVIYDY-SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHR 643
+I ++ + +L +L N + +L + + ++SA+ YL + + IHR
Sbjct: 82 FYIIIEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSAMEYLEK---KNFIHR 133
Query: 644 NITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEA 703
++ + + + ++ F L+ +T + + + + + +PE + +
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMTGD------TXTAHAGAKFPIKWTAPESLAYNKF 187
Query: 704 TSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNH 763
+ +DV++FGV++ E+ T M+ P G+ +V+ EL++ E
Sbjct: 188 SIKSDVWAFGVLLWEIATYGMS---PYP-GIDPSQVY----------ELLEKDYRMERPE 233
Query: 764 KELMRLIKLGIACTLSNPELRPSMRQI 790
++ +L AC NP RPS +I
Sbjct: 234 GCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 113/230 (49%), Gaps = 31/230 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDG----TVVAVKCLAE-KGERFEKTFAAELVAVAHLRH 167
F + +VLGSG FG VY+ + +G VA+K L E + K E +A + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
++ RL G C+ + L+ MP L + +N+ + LNW + +A
Sbjct: 80 PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 132
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
++YL ++ +++HRD+ NV++ + + ++ DFGLA+ L A ++H
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYH 178
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVD 336
AE ++ I ++ ES + T +SDV+S+G+ V E+++ G + D
Sbjct: 179 -AEGGKV--PIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYD 224
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 96/231 (41%), Gaps = 21/231 (9%)
Query: 496 MVETPREISFKEIISATNNFSESQRVAEMDFGTAYQGFLDNHQY-----VLVKRLGMSKC 550
M E P + + I F + + + FGT Y+G V +K L +
Sbjct: 3 MGEAPNQALLR--ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 60
Query: 551 PALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGH 610
P +E +A + + ++ +L G C L++ +L ++ H ++
Sbjct: 61 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQ 120
Query: 611 SILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLT 670
+L W +A + YL + +++HR++ + + + + ++ F LA+ L
Sbjct: 121 YLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 171
Query: 671 RNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
+ + A G ++ +M+ E I T +DV+S+GV V E++T
Sbjct: 172 AEEKEYH-AEGGKVPIK----WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 113/230 (49%), Gaps = 31/230 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDG----TVVAVKCLAE-KGERFEKTFAAELVAVAHLRH 167
F + +VLGSG FG VY+ + +G VA+K L E + K E +A + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
++ RL G C+ + L+ MP L + +N+ + LNW + +A
Sbjct: 79 PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 131
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
++YL ++ +++HRD+ NV++ + + ++ DFGLA+ L A ++H
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYH 177
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVD 336
AE ++ I ++ ES + T +SDV+S+G+ V E+++ G + D
Sbjct: 178 -AEGGKV--PIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYD 223
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 91/218 (41%), Gaps = 19/218 (8%)
Query: 509 ISATNNFSESQRVAEMDFGTAYQGFLDNHQY-----VLVKRLGMSKCPALRTRFSNELQN 563
I F + + + FGT Y+G V +K L + P +E
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 564 LARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
+A + + ++ +L G C L++ +L ++ H ++ +L W
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 126
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
+A + YL + +++HR++ + + + + ++ F LA+ L + + A G
Sbjct: 127 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH-AEGGK 182
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
++ +M+ E I T +DV+S+GV V E++T
Sbjct: 183 VPIK----WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 113/230 (49%), Gaps = 31/230 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDG----TVVAVKCLAE-KGERFEKTFAAELVAVAHLRH 167
F + +VLGSG FG VY+ + +G VA+K L E + K E +A + +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
++ RL G C+ + L+ MP L + +N+ + LNW + +A
Sbjct: 78 PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 130
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
++YL ++ +++HRD+ NV++ + + ++ DFGLA+ L A ++H
Sbjct: 131 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYH 176
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVD 336
AE ++ I ++ ES + T +SDV+S+G+ V E+++ G + D
Sbjct: 177 -AEGGKV--PIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYD 222
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 91/218 (41%), Gaps = 19/218 (8%)
Query: 509 ISATNNFSESQRVAEMDFGTAYQGFLDNHQY-----VLVKRLGMSKCPALRTRFSNELQN 563
I F + + + FGT Y+G V +K L + P +E
Sbjct: 12 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 71
Query: 564 LARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
+A + + ++ +L G C L++ +L ++ H ++ +L W
Sbjct: 72 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 125
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
+A + YL + +++HR++ + + + + ++ F LA+ L + + A G
Sbjct: 126 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH-AEGGK 181
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
++ +M+ E I T +DV+S+GV V E++T
Sbjct: 182 VPIK----WMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 123/303 (40%), Gaps = 57/303 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTV-------VAVKCLAEKGERFEKT-FAAELVAVAHLRHRNL 170
LG G FG VY V + G V VA+K + E E+ F E + ++
Sbjct: 23 LGQGSFGMVYEGV--AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 80
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFR-RPE--NLEAAAPLNWEQRKKIIRGLAAA 227
VRL G L++ + M L L RP N AP + + ++ +A
Sbjct: 81 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 140
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
+ YL+ + +HRD+ N M+ + ++GDFG+ R +
Sbjct: 141 MAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR------------------DIY 179
Query: 288 LAETTRIGGTIGYLP-----PESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDD 342
+ R GG G LP PES + G V T SDV+SFG+V+ E+ + ++
Sbjct: 180 ETDYYRKGGK-GLLPVRWMSPESLKDG-VFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 237
Query: 343 QIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEXXXXXXXXXXXXNPHLRPSMKWVI 402
Q++ R EG +L DN D ++L M NP +RPS +I
Sbjct: 238 QVL------RFVMEGGLLDKPDN-CPDMLFELMRM---------CWQYNPKMRPSFLEII 281
Query: 403 EAV 405
++
Sbjct: 282 SSI 284
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 128/307 (41%), Gaps = 40/307 (13%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFL------DNHQYVLVKRLGMSKCPALRTRFSNELQNL 564
A + S+ + + FG Y+G + V +K + + R F NE +
Sbjct: 13 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 72
Query: 565 ARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLL------FHNNHRIGHSILQWHHR 618
++V+L G ++ LVI + L L NN + L
Sbjct: 73 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS--KM 130
Query: 619 YNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRK 678
+ +A + YL+ + +HR++ + + D ++G F + + D+ +RK
Sbjct: 131 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY-YRK 186
Query: 679 ATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKR 738
G VR +MSPE ++ G T+ +DV+SFGVV+ E+ T + + +GL ++
Sbjct: 187 GGKGLLPVR----WMSPESLKDGVFTTYSDVWSFGVVLWEIAT----LAEQPYQGLSNEQ 238
Query: 739 VHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGND 798
V F L+D N ELMR+ C NP++RPS +I+S +
Sbjct: 239 VLRFVME----GGLLDKPDNCPDMLFELMRM------CWQYNPKMRPSFLEIISSI---- 284
Query: 799 KRFMEDG 805
K ME G
Sbjct: 285 KEEMEPG 291
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 107/239 (44%), Gaps = 31/239 (12%)
Query: 110 SNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGER---FEKTFAAELVAVAHLR 166
S+ ++ E+LG GG +V+ A D VAVK L R F F E A L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 167 HRNLVRLRGWCVHEDQL----LLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIR 222
H +V + E +V +Y +D V R + + P+ ++ ++I
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEY-----VDGVTLR--DIVHTEGPMTPKRAIEVIA 123
Query: 223 GLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSAR 282
AL++ H+ IIHRDVK +N+M+ + ++ DFG+AR +
Sbjct: 124 DACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIA------------- 167
Query: 283 NHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPD 341
+ + +T + GT YL PE + SV A+SDV+S G V+ EV++G PD
Sbjct: 168 DSGNSVTQTAAVIGTAQYLSPEQARGDSV-DARSDVYSLGCVLYEVLTGEPPFTGDSPD 225
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 94/216 (43%), Gaps = 23/216 (10%)
Query: 534 LDNHQYVLVK--RLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEM------ 585
L +H+ V VK R +++ P+ RF E QN A L H +V + + T + E
Sbjct: 34 LRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV--YDTGEAETPAGPLP 91
Query: 586 LVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNI 645
++ +Y L ++ H G + +I A+ + H+ +IHR++
Sbjct: 92 YIVMEYVDGVTLRDIV----HTEGP--MTPKRAIEVIADACQALNFSHQNG---IIHRDV 142
Query: 646 TSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATS 705
+ I + ++ F +A + D G+ + + +V G Y+SPE +
Sbjct: 143 KPANIMISATNAVKVMDFGIARAIA--DSGN--SVTQTAAVIGTAQYLSPEQARGDSVDA 198
Query: 706 MADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHE 741
+DVYS G V+ EV+TG+ P+ + + V E
Sbjct: 199 RSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVRE 234
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 113/230 (49%), Gaps = 31/230 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDG----TVVAVKCLAE-KGERFEKTFAAELVAVAHLRH 167
F + +VLGSG FG VY+ + +G VA+K L E + K E +A + +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
++ RL G C+ + L+ MP L + +N+ + LNW + +A
Sbjct: 78 PHVCRLLGICL-TSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IAKG 130
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
++YL ++ +++HRD+ NV++ + + ++ DFGLA+ L A ++H
Sbjct: 131 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYH 176
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVD 336
AE ++ I ++ ES + T +SDV+S+G+ V E+++ G + D
Sbjct: 177 -AEGGKV--PIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYD 222
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 91/218 (41%), Gaps = 19/218 (8%)
Query: 509 ISATNNFSESQRVAEMDFGTAYQGFLDNHQY-----VLVKRLGMSKCPALRTRFSNELQN 563
I F + + + FGT Y+G V +K L + P +E
Sbjct: 12 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 71
Query: 564 LARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
+A + + ++ +L G C L++ +L ++ H ++ +L W
Sbjct: 72 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNW------CV 125
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
+A + YL + +++HR++ + + + + ++ F LA+ L + + A G
Sbjct: 126 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH-AEGGK 181
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
++ +M+ E I T +DV+S+GV V E++T
Sbjct: 182 VPIK----WMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 113/230 (49%), Gaps = 31/230 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDG----TVVAVKCLAE-KGERFEKTFAAELVAVAHLRH 167
F + +VLGSG FG VY+ + +G VA+K L E + K E +A + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
++ RL G C+ + L+ MP L + +N+ + LNW + +A
Sbjct: 77 PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 129
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
++YL ++ +++HRD+ NV++ + + ++ DFGLA+ L A ++H
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYH 175
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVD 336
AE ++ I ++ ES + T +SDV+S+G+ V E+++ G + D
Sbjct: 176 -AEGGKV--PIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYD 221
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 91/218 (41%), Gaps = 19/218 (8%)
Query: 509 ISATNNFSESQRVAEMDFGTAYQGFLDNHQY-----VLVKRLGMSKCPALRTRFSNELQN 563
I F + + + FGT Y+G V +K L + P +E
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 564 LARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
+A + + ++ +L G C L++ +L ++ H ++ +L W
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 124
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
+A + YL + +++HR++ + + + + ++ F LA+ L + + A G
Sbjct: 125 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH-AEGGK 180
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
++ +M+ E I T +DV+S+GV V E++T
Sbjct: 181 VPIK----WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 113/230 (49%), Gaps = 31/230 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDG----TVVAVKCLAE-KGERFEKTFAAELVAVAHLRH 167
F + +VLGSG FG VY+ + +G VA+K L E + K E +A + +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
++ RL G C+ + L+ MP L + +N+ + LNW + +A
Sbjct: 81 PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 133
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
++YL ++ +++HRD+ NV++ + + ++ DFGLA+ L A ++H
Sbjct: 134 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYH 179
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVD 336
AE ++ I ++ ES + T +SDV+S+G+ V E+++ G + D
Sbjct: 180 -AEGGKV--PIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYD 225
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 91/218 (41%), Gaps = 19/218 (8%)
Query: 509 ISATNNFSESQRVAEMDFGTAYQGFLDNHQY-----VLVKRLGMSKCPALRTRFSNELQN 563
I F + + + FGT Y+G V +K L + P +E
Sbjct: 15 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 74
Query: 564 LARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
+A + + ++ +L G C L++ +L ++ H ++ +L W
Sbjct: 75 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 128
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
+A + YL + +++HR++ + + + + ++ F LA+ L + + A G
Sbjct: 129 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH-AEGGK 184
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
++ +M+ E I T +DV+S+GV V E++T
Sbjct: 185 VPIK----WMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 106/230 (46%), Gaps = 36/230 (15%)
Query: 119 LGSGGFGKVYRAVL-------PSDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHL-RHRN 169
LG G FG+V A P + VAVK L + E+ +E+ + + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVL-FRRPENLEAAAPLNWEQRKKII------- 221
++ L G C + L ++ +Y +L L RRP +E + +N +++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 222 -RGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSS 280
LA + YL Q + IHRD+ NV++ ++ DFGLAR + + + +T++
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDXXKKTTN 218
Query: 281 ARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
R + ++ PE+ V T +SDV+SFG+++ E+ +
Sbjct: 219 GRL-------------PVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFT 254
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 107/238 (44%), Gaps = 32/238 (13%)
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLL----------FHNNHRIGHSILQWHH 617
+H+N++ L G CT+ G + VI +Y++ L L ++ +R+ + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 618 RYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHR 677
+ LA + YL +++ IHR++ + + + + ++ F LA + D +
Sbjct: 159 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDX-XK 214
Query: 678 KATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVK 737
K T+G V+ +M+PE + T +DV+SFGV++ E+ T + +P L K
Sbjct: 215 KTTNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270
Query: 738 RVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
+ E +P +L + +MR C + P RP+ +Q++ LD
Sbjct: 271 LLKEGHRMDKPANCTNELYM--------MMR------DCWHAVPSQRPTFKQLVEDLD 314
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 113/230 (49%), Gaps = 31/230 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDG----TVVAVKCLAE-KGERFEKTFAAELVAVAHLRH 167
F + +VLGSG FG VY+ + +G VA+K L E + K E +A + +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
++ RL G C+ + L+ MP L + +N+ + LNW + +A
Sbjct: 102 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 154
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
++YL ++ +++HRD+ NV++ + + ++ DFGLA+ L A ++H
Sbjct: 155 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYH 200
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVD 336
AE ++ I ++ ES + T +SDV+S+G+ V E+++ G + D
Sbjct: 201 -AEGGKV--PIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYD 246
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/289 (18%), Positives = 116/289 (40%), Gaps = 35/289 (12%)
Query: 509 ISATNNFSESQRVAEMDFGTAYQGFLDNHQY-----VLVKRLGMSKCPALRTRFSNELQN 563
I F + + + FGT Y+G V +K L + P +E
Sbjct: 36 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 95
Query: 564 LARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
+A + + ++ +L G C L+ +L ++ H ++ +L W
Sbjct: 96 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 149
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
+A + YL + +++HR++ + + + + ++ F LA+ L + + A G
Sbjct: 150 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH-AEGGK 205
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEF 742
++ +M+ E I T +DV+S+GV V E++T G D +P + + +
Sbjct: 206 VPIK----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKG 260
Query: 743 EARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQIL 791
E +P +D+ + + + C + + + RP R+++
Sbjct: 261 ERLPQPPICTIDVYM--------------IMVKCWMIDADSRPKFRELI 295
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 105/222 (47%), Gaps = 38/222 (17%)
Query: 119 LGSGGFGKV----YRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLVRL 173
LG G FGKV Y G +VAVK L A+ G + + E+ + L H ++++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 174 RGWCVHED----QLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
+G C ED L LV +Y+P SL L R L A L + Q +I G+A
Sbjct: 99 KGCC--EDAGAASLQLVMEYVPLGSLRDYLPRHSIGL--AQLLLFAQ--QICEGMA---- 148
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWL-EHELQYQMRTSSARNHQFHL 288
YLH Q IHRD+ NV+LD+ ++GDFGLA+ + E Y++R
Sbjct: 149 YLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDG-------- 197
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ + PE ++ A SDV+SFG+ + E+++
Sbjct: 198 ------DSPVFWYAPECLKEYKFYYA-SDVWSFGVTLYELLT 232
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 16/186 (8%)
Query: 538 QYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQG--EMLVIYDYSATR 595
+ V VK L P R+ + E+ L L H ++++ G C + G + ++ +Y
Sbjct: 61 EMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLG 120
Query: 596 ILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPD 655
L L H IG + L + + + YLH + IHR++ + + LD D
Sbjct: 121 SLRDYL--PRHSIGLAQLLL-----FAQQICEGMAYLH---AQHYIHRDLAARNVLLDND 170
Query: 656 MNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVV 715
++G F LA+ + +R G+ V F Y +PE ++ + +DV+SFGV
Sbjct: 171 RLVKIGDFGLAKAVPEGHEXYRVREDGDSPV---FWY-APECLKEYKFYYASDVWSFGVT 226
Query: 716 VLEVVT 721
+ E++T
Sbjct: 227 LYELLT 232
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 113/230 (49%), Gaps = 31/230 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDG----TVVAVKCLAE-KGERFEKTFAAELVAVAHLRH 167
F + +VLGSG FG VY+ + +G VA+K L E + K E +A + +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
++ RL G C+ + L+ MP L + +N+ + LNW + +A
Sbjct: 84 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 136
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
++YL ++ +++HRD+ NV++ + + ++ DFGLA+ L A ++H
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYH 182
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVD 336
AE ++ I ++ ES + T +SDV+S+G+ V E+++ G + D
Sbjct: 183 -AEGGKV--PIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYD 228
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 90/218 (41%), Gaps = 19/218 (8%)
Query: 509 ISATNNFSESQRVAEMDFGTAYQGFLDNHQY-----VLVKRLGMSKCPALRTRFSNELQN 563
I F + + + FGT Y+G V +K L + P +E
Sbjct: 18 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 77
Query: 564 LARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
+A + + ++ +L G C L+ +L ++ H ++ +L W
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 131
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
+A + YL + +++HR++ + + + + ++ F LA+ L + + A G
Sbjct: 132 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH-AEGGK 187
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
++ +M+ E I T +DV+S+GV V E++T
Sbjct: 188 VPIK----WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 113/230 (49%), Gaps = 31/230 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDG----TVVAVKCLAE-KGERFEKTFAAELVAVAHLRH 167
F + +VLGSG FG VY+ + +G VA+K L E + K E +A + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
++ RL G C+ + L+ MP L + +N+ + LNW + +A
Sbjct: 77 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 129
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
++YL ++ +++HRD+ NV++ + + ++ DFGLA+ L A ++H
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYH 175
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVD 336
AE ++ I ++ ES + T +SDV+S+G+ V E+++ G + D
Sbjct: 176 -AEGGKV--PIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYD 221
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 90/218 (41%), Gaps = 19/218 (8%)
Query: 509 ISATNNFSESQRVAEMDFGTAYQGFLDNHQY-----VLVKRLGMSKCPALRTRFSNELQN 563
I F + + + FGT Y+G V +K L + P +E
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 564 LARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
+A + + ++ +L G C L+ +L ++ H ++ +L W
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 124
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
+A + YL + +++HR++ + + + + ++ F LA+ L + + A G
Sbjct: 125 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH-AEGGK 180
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
++ +M+ E I T +DV+S+GV V E++T
Sbjct: 181 VPIK----WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 113/230 (49%), Gaps = 31/230 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDG----TVVAVKCLAE-KGERFEKTFAAELVAVAHLRH 167
F + +VLGSG FG VY+ + +G VA+K L E + K E +A + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
++ RL G C+ + L+ MP L + +N+ + LNW + +A
Sbjct: 80 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 132
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
++YL ++ +++HRD+ NV++ + + ++ DFGLA+ L A ++H
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYH 178
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVD 336
AE ++ I ++ ES + T +SDV+S+G+ V E+++ G + D
Sbjct: 179 -AEGGKV--PIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYD 224
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 95/231 (41%), Gaps = 21/231 (9%)
Query: 496 MVETPREISFKEIISATNNFSESQRVAEMDFGTAYQGFLDNHQY-----VLVKRLGMSKC 550
M E P + + I F + + + FGT Y+G V +K L +
Sbjct: 3 MGEAPNQALLR--ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 60
Query: 551 PALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGH 610
P +E +A + + ++ +L G C L+ +L ++ H ++
Sbjct: 61 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQ 120
Query: 611 SILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLT 670
+L W +A + YL + +++HR++ + + + + ++ F LA+ L
Sbjct: 121 YLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 171
Query: 671 RNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
+ + A G ++ +M+ E I T +DV+S+GV V E++T
Sbjct: 172 AEEKEYH-AEGGKVPIK----WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 113/230 (49%), Gaps = 31/230 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDG----TVVAVKCLAE-KGERFEKTFAAELVAVAHLRH 167
F + +VLGSG FG VY+ + +G VA+K L E + K E +A + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
++ RL G C+ + L+ MP L + +N+ + LNW + +A
Sbjct: 80 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 132
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
++YL ++ +++HRD+ NV++ + + ++ DFGLA+ L A ++H
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYH 178
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVD 336
AE ++ I ++ ES + T +SDV+S+G+ V E+++ G + D
Sbjct: 179 -AEGGKV--PIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYD 224
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 95/231 (41%), Gaps = 21/231 (9%)
Query: 496 MVETPREISFKEIISATNNFSESQRVAEMDFGTAYQGFLDNHQY-----VLVKRLGMSKC 550
M E P + + I F + + + FGT Y+G V +K L +
Sbjct: 3 MGEAPNQALLR--ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 60
Query: 551 PALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGH 610
P +E +A + + ++ +L G C L+ +L ++ H ++
Sbjct: 61 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQ 120
Query: 611 SILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLT 670
+L W +A + YL + +++HR++ + + + + ++ F LA+ L
Sbjct: 121 YLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 171
Query: 671 RNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
+ + A G ++ +M+ E I T +DV+S+GV V E++T
Sbjct: 172 AEEKEYH-AEGGKVPIK----WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 113/230 (49%), Gaps = 31/230 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDG----TVVAVKCLAE-KGERFEKTFAAELVAVAHLRH 167
F + +VLGSG FG VY+ + +G VA+K L E + K E +A + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
++ RL G C+ + L+ MP L + +N+ + LNW + +A
Sbjct: 80 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 132
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
++YL ++ +++HRD+ NV++ + + ++ DFGLA+ L A ++H
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYH 178
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVD 336
AE ++ I ++ ES + T +SDV+S+G+ V E+++ G + D
Sbjct: 179 -AEGGKV--PIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYD 224
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 95/231 (41%), Gaps = 21/231 (9%)
Query: 496 MVETPREISFKEIISATNNFSESQRVAEMDFGTAYQGFLDNHQY-----VLVKRLGMSKC 550
M E P + + I F + + + FGT Y+G V +K L +
Sbjct: 3 MGEAPNQALLR--ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 60
Query: 551 PALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGH 610
P +E +A + + ++ +L G C L+ +L ++ H ++
Sbjct: 61 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQ 120
Query: 611 SILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLT 670
+L W +A + YL + +++HR++ + + + + ++ F LA+ L
Sbjct: 121 YLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 171
Query: 671 RNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
+ + A G ++ +M+ E I T +DV+S+GV V E++T
Sbjct: 172 AEEKEYH-AEGGKVPIK----WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 113/230 (49%), Gaps = 31/230 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDG----TVVAVKCLAE-KGERFEKTFAAELVAVAHLRH 167
F + +VLGSG FG VY+ + +G VA+K L E + K E +A + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
++ RL G C+ + L+ MP L + +N+ + LNW + +A
Sbjct: 77 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 129
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
++YL ++ +++HRD+ NV++ + + ++ DFGLA+ L A ++H
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYH 175
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVD 336
AE ++ I ++ ES + T +SDV+S+G+ V E+++ G + D
Sbjct: 176 -AEGGKV--PIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYD 221
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 90/218 (41%), Gaps = 19/218 (8%)
Query: 509 ISATNNFSESQRVAEMDFGTAYQGFLDNHQY-----VLVKRLGMSKCPALRTRFSNELQN 563
I F + + + FGT Y+G V +K L + P +E
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 564 LARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
+A + + ++ +L G C L+ +L ++ H ++ +L W
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 124
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
+A + YL + +++HR++ + + + + ++ F LA+ L + + A G
Sbjct: 125 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH-AEGGK 180
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
++ +M+ E I T +DV+S+GV V E++T
Sbjct: 181 VPIK----WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 113/230 (49%), Gaps = 31/230 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDG----TVVAVKCLAE-KGERFEKTFAAELVAVAHLRH 167
F + +VLGSG FG VY+ + +G VA+K L E + K E +A + +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
++ RL G C+ + L+ MP L + +N+ + LNW + +A
Sbjct: 83 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 135
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
++YL ++ +++HRD+ NV++ + + ++ DFGLA+ L A ++H
Sbjct: 136 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYH 181
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVD 336
AE ++ I ++ ES + T +SDV+S+G+ V E+++ G + D
Sbjct: 182 -AEGGKV--PIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYD 227
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/289 (18%), Positives = 116/289 (40%), Gaps = 35/289 (12%)
Query: 509 ISATNNFSESQRVAEMDFGTAYQGFLDNHQY-----VLVKRLGMSKCPALRTRFSNELQN 563
I F + + + FGT Y+G V +K L + P +E
Sbjct: 17 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 76
Query: 564 LARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
+A + + ++ +L G C L+ +L ++ H ++ +L W
Sbjct: 77 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 130
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
+A + YL + +++HR++ + + + + ++ F LA+ L + + A G
Sbjct: 131 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH-AEGGK 186
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEF 742
++ +M+ E I T +DV+S+GV V E++T G D +P + + +
Sbjct: 187 VPIK----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKG 241
Query: 743 EARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQIL 791
E +P +D+ + + + C + + + RP R+++
Sbjct: 242 ERLPQPPICTIDVYM--------------IMVKCWMIDADSRPKFRELI 276
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 113/230 (49%), Gaps = 31/230 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDG----TVVAVKCLAE-KGERFEKTFAAELVAVAHLRH 167
F + +VLGSG FG VY+ + +G VA+K L E + K E +A + +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
++ RL G C+ + L+ MP L + +N+ + LNW + +A
Sbjct: 87 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 139
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
++YL ++ +++HRD+ NV++ + + ++ DFGLA+ L A ++H
Sbjct: 140 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYH 185
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVD 336
AE ++ I ++ ES + T +SDV+S+G+ V E+++ G + D
Sbjct: 186 -AEGGKV--PIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYD 231
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 90/218 (41%), Gaps = 19/218 (8%)
Query: 509 ISATNNFSESQRVAEMDFGTAYQGFLDNHQY-----VLVKRLGMSKCPALRTRFSNELQN 563
I F + + + FGT Y+G V +K L + P +E
Sbjct: 21 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 80
Query: 564 LARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
+A + + ++ +L G C L+ +L ++ H ++ +L W
Sbjct: 81 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 134
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
+A + YL + +++HR++ + + + + ++ F LA+ L + + A G
Sbjct: 135 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH-AEGGK 190
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
++ +M+ E I T +DV+S+GV V E++T
Sbjct: 191 VPIK----WMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 113/230 (49%), Gaps = 31/230 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDG----TVVAVKCLAE-KGERFEKTFAAELVAVAHLRH 167
F + +VLGSG FG VY+ + +G VA+K L E + K E +A + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
++ RL G C+ + L+ MP L + +N+ + LNW + +A
Sbjct: 79 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 131
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
++YL ++ +++HRD+ NV++ + + ++ DFGLA+ L A ++H
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYH 177
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVD 336
AE ++ I ++ ES + T +SDV+S+G+ V E+++ G + D
Sbjct: 178 -AEGGKV--PIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYD 223
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 90/218 (41%), Gaps = 19/218 (8%)
Query: 509 ISATNNFSESQRVAEMDFGTAYQGFLDNHQY-----VLVKRLGMSKCPALRTRFSNELQN 563
I F + + + FGT Y+G V +K L + P +E
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 564 LARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
+A + + ++ +L G C L+ +L ++ H ++ +L W
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 126
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
+A + YL + +++HR++ + + + + ++ F LA+ L + + A G
Sbjct: 127 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH-AEGGK 182
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
++ +M+ E I T +DV+S+GV V E++T
Sbjct: 183 VPIK----WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 113/230 (49%), Gaps = 31/230 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDG----TVVAVKCLAE-KGERFEKTFAAELVAVAHLRH 167
F + +VLGSG FG VY+ + +G VA+K L E + K E +A + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
++ RL G C+ + L+ MP L + +N+ + LNW + +A
Sbjct: 77 PHVCRLLGICL-TSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IAKG 129
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
++YL ++ +++HRD+ NV++ + + ++ DFGLA+ L A ++H
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYH 175
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVD 336
AE ++ I ++ ES + T +SDV+S+G+ V E+++ G + D
Sbjct: 176 -AEGGKV--PIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYD 221
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 90/218 (41%), Gaps = 19/218 (8%)
Query: 509 ISATNNFSESQRVAEMDFGTAYQGFLDNHQY-----VLVKRLGMSKCPALRTRFSNELQN 563
I F + + + FGT Y+G V +K L + P +E
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 564 LARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
+A + + ++ +L G C L+ +L ++ H ++ +L W
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNW------CV 124
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
+A + YL + +++HR++ + + + + ++ F LA+ L + + A G
Sbjct: 125 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH-AEGGK 180
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
++ +M+ E I T +DV+S+GV V E++T
Sbjct: 181 VPIK----WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 25/212 (11%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G +G+VY V VAVK L E E+ F E + ++H NLV+L G C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E ++ ++M +L L R E A + +I ++A+ YL ++
Sbjct: 93 REPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQI----SSAMEYLEKK---N 144
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
IHRD+ N ++ + ++ DFGL+R + + + H I T
Sbjct: 145 FIHRDLAARNCLVGENHLVKVADFGLSRLM-----------TGDTYTAHAGAKFPIKWT- 192
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PES + KSDV++FG+++ E+ +
Sbjct: 193 ---APESLAYNKFSI-KSDVWAFGVLLWEIAT 220
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 526 FGTAYQGFLDNHQY-VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGE 584
+G Y+G + V VK L F E + ++H NLVQL G CT +
Sbjct: 39 YGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVCTREPP 96
Query: 585 MLVIYDY-SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHR 643
+I ++ + +L +L N + +L + + ++SA+ YL + + IHR
Sbjct: 97 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLEK---KNFIHR 148
Query: 644 NITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEA 703
++ + + + ++ F L+ +T + + + + + + +PE + +
Sbjct: 149 DLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAKFPIKWTAPESLAYNKF 202
Query: 704 TSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNH 763
+ +DV++FGV++ E+ T M+ P G+ + +V+ EL++ E
Sbjct: 203 SIKSDVWAFGVLLWEIATYGMS---PYP-GIDLSQVY----------ELLEKDYRMERPE 248
Query: 764 KELMRLIKLGIACTLSNPELRPSMRQI 790
++ +L AC NP RPS +I
Sbjct: 249 GCPEKVYELMRACWQWNPSDRPSFAEI 275
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 25/212 (11%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G +G+VY V VAVK L E E+ F E + ++H NLV+L G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E ++ ++M +L L R E A + +I ++A+ YL ++
Sbjct: 85 REPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQI----SSAMEYLEKK---N 136
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
IHRD+ N ++ + ++ DFGL+R + + + H I T
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLM-----------TGDTYTAHAGAKFPIKWTA 185
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PES + KSDV++FG+++ E+ +
Sbjct: 186 ----PESLAYNKFSI-KSDVWAFGVLLWEIAT 212
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 526 FGTAYQGFLDNHQY-VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGE 584
+G Y+G + V VK L F E + ++H NLVQL G CT +
Sbjct: 31 YGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVCTREPP 88
Query: 585 MLVIYDY-SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHR 643
+I ++ + +L +L N + +L + + ++SA+ YL + + IHR
Sbjct: 89 FYIIIEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLEK---KNFIHR 140
Query: 644 NITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEA 703
++ + + + ++ F L+ +T + + + + + + +PE + +
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAKFPIKWTAPESLAYNKF 194
Query: 704 TSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNH 763
+ +DV++FGV++ E+ T M+ P G+ + +V+ EL++ E
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMS---PYP-GIDLSQVY----------ELLEKDYRMERPE 240
Query: 764 KELMRLIKLGIACTLSNPELRPSMRQI 790
++ +L AC NP RPS +I
Sbjct: 241 GCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 25/212 (11%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G +G+VY V VAVK L E E+ F E + ++H NLV+L G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E ++ ++M +L L R E A + +I ++A+ YL ++
Sbjct: 85 REPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQI----SSAMEYLEKK---N 136
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
IHRD+ N ++ + ++ DFGL+R + + + H I T
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLM-----------TGDTYTAHAGAKFPIKWTA 185
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PES + KSDV++FG+++ E+ +
Sbjct: 186 ----PESLAYNKFSI-KSDVWAFGVLLWEIAT 212
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 526 FGTAYQGFLDNHQY-VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGE 584
+G Y+G + V VK L F E + ++H NLVQL G CT +
Sbjct: 31 YGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVCTREPP 88
Query: 585 MLVIYDY-SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHR 643
+I ++ + +L +L N + +L + + ++SA+ YL + + IHR
Sbjct: 89 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLEK---KNFIHR 140
Query: 644 NITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEA 703
++ + + + ++ F L+ +T + + + + + + +PE + +
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAKFPIKWTAPESLAYNKF 194
Query: 704 TSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNH 763
+ +DV++FGV++ E+ T M+ P G+ + +V+ EL++ E
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMS---PYP-GIDLSQVY----------ELLEKDYRMERPE 240
Query: 764 KELMRLIKLGIACTLSNPELRPSMRQI 790
++ +L AC NP RPS +I
Sbjct: 241 GCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 113/230 (49%), Gaps = 31/230 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDG----TVVAVKCLAE-KGERFEKTFAAELVAVAHLRH 167
F + +VLGSG FG VY+ + +G VA+K L E + K E +A + +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
++ RL G C+ + L+ MP L + +N+ + LNW + +A
Sbjct: 74 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAEG 126
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
++YL ++ +++HRD+ NV++ + + ++ DFGLA+ L A ++H
Sbjct: 127 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYH 172
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVD 336
AE ++ I ++ ES + T +SDV+S+G+ V E+++ G + D
Sbjct: 173 -AEGGKV--PIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYD 218
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 90/218 (41%), Gaps = 19/218 (8%)
Query: 509 ISATNNFSESQRVAEMDFGTAYQGFLDNHQY-----VLVKRLGMSKCPALRTRFSNELQN 563
I F + + + FGT Y+G V +K L + P +E
Sbjct: 8 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 67
Query: 564 LARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
+A + + ++ +L G C L+ +L ++ H ++ +L W
Sbjct: 68 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 121
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
+A + YL + +++HR++ + + + + ++ F LA+ L + + A G
Sbjct: 122 QIAEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH-AEGGK 177
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
++ +M+ E I T +DV+S+GV V E++T
Sbjct: 178 VPIK----WMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 113/230 (49%), Gaps = 31/230 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDG----TVVAVKCLAE-KGERFEKTFAAELVAVAHLRH 167
F + +VLGSG FG VY+ + +G VA+K L E + K E +A + +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
++ RL G C+ + L+ MP L + +N+ + LNW + +A
Sbjct: 71 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 123
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
++YL ++ +++HRD+ NV++ + + ++ DFGLA+ L A ++H
Sbjct: 124 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYH 169
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVD 336
AE ++ I ++ ES + T +SDV+S+G+ V E+++ G + D
Sbjct: 170 -AEGGKV--PIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYD 215
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 90/218 (41%), Gaps = 19/218 (8%)
Query: 509 ISATNNFSESQRVAEMDFGTAYQGFLDNHQY-----VLVKRLGMSKCPALRTRFSNELQN 563
I F + + + FGT Y+G V +K L + P +E
Sbjct: 5 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 64
Query: 564 LARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
+A + + ++ +L G C L+ +L ++ H ++ +L W
Sbjct: 65 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 118
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
+A + YL + +++HR++ + + + + ++ F LA+ L + + A G
Sbjct: 119 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH-AEGGK 174
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
++ +M+ E I T +DV+S+GV V E++T
Sbjct: 175 VPIK----WMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 25/212 (11%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G +G+VY V VAVK L E E+ F E + ++H NLV+L G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E ++ ++M +L L R E A + +I ++A+ YL ++
Sbjct: 85 REPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQI----SSAMEYLEKK---N 136
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
IHRD+ N ++ + ++ DFGL+R + + + H I T
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLM-----------TGDTYTAHAGAKFPIKWTA 185
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PES + KSDV++FG+++ E+ +
Sbjct: 186 ----PESLAYNKFSI-KSDVWAFGVLLWEIAT 212
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 526 FGTAYQGFLDNHQY-VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGE 584
+G Y+G + V VK L F E + ++H NLVQL G CT +
Sbjct: 31 YGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVCTREPP 88
Query: 585 MLVIYDY-SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHR 643
+I ++ + +L +L N + +L + + ++SA+ YL + + IHR
Sbjct: 89 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLEK---KNFIHR 140
Query: 644 NITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEA 703
++ + + + ++ F L+ +T + + + + + + +PE + +
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAKFPIKWTAPESLAYNKF 194
Query: 704 TSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNH 763
+ +DV++FGV++ E+ T M+ P G+ + +V+ EL++ E
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMS---PYP-GIDLSQVY----------ELLEKDYRMERPE 240
Query: 764 KELMRLIKLGIACTLSNPELRPSMRQI 790
++ +L AC NP RPS +I
Sbjct: 241 GCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 25/212 (11%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G +G+VY V VAVK L E E+ F E + ++H NLV+L G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E ++ ++M +L L R E A + +I ++A+ YL ++
Sbjct: 82 REPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQI----SSAMEYLEKK---N 133
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
IHRD+ N ++ + ++ DFGL+R + + + H I T
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLM-----------TGDTYTAHAGAKFPIKWT- 181
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PES + KSDV++FG+++ E+ +
Sbjct: 182 ---APESLAYNKFSI-KSDVWAFGVLLWEIAT 209
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 526 FGTAYQGFLDNHQY-VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGE 584
+G Y+G + V VK L F E + ++H NLVQL G CT +
Sbjct: 28 YGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVCTREPP 85
Query: 585 MLVIYDY-SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHR 643
+I ++ + +L +L N + +L + + ++SA+ YL + + IHR
Sbjct: 86 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLEK---KNFIHR 137
Query: 644 NITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEA 703
++ + + + ++ F L+ +T + + + + + + +PE + +
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAKFPIKWTAPESLAYNKF 191
Query: 704 TSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNH 763
+ +DV++FGV++ E+ T M+ P G+ + +V+ EL++ E
Sbjct: 192 SIKSDVWAFGVLLWEIATYGMS---PYP-GIDLSQVY----------ELLEKDYRMERPE 237
Query: 764 KELMRLIKLGIACTLSNPELRPSMRQI 790
++ +L AC NP RPS +I
Sbjct: 238 GCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 104/230 (45%), Gaps = 31/230 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LGSG FG V V AVK + E G E F E + L H LV+ G C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDV-AVKMIKE-GSMSEDEFFQEAQTMMKLSHPKLVKFYGVCS 73
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLET- 237
E + +V +Y+ N L L + LE + L E + G+A LE+
Sbjct: 74 KEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLL--EMCYDVCEGMAF--------LESH 123
Query: 238 QIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGT 297
Q IHRD+ N ++D ++ DFG+ R++ + Q+ + T+
Sbjct: 124 QFIHRDLAARNCLVDRDLCVKVSDFGMTRYV-------------LDDQYVSSVGTKF--P 168
Query: 298 IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQIIL 346
+ + PE F ++KSDV++FGI++ EV S G+ DL Y + +++L
Sbjct: 169 VKWSAPEVFHYFKY-SSKSDVWAFGILMWEVFSLGKMPYDL-YTNSEVVL 216
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 110/241 (45%), Gaps = 32/241 (13%)
Query: 557 FSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY-SATRILSHLLFHNNHRIGHSILQW 615
F E Q + +L H LV+ G C+++ + ++ +Y S +L++L H +L+
Sbjct: 50 FFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLE- 108
Query: 616 HHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHG 675
Y++ + +A +L + Q IHR++ + +D D+ ++ F + ++ + +
Sbjct: 109 -MCYDVCEGMA----FLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYV 160
Query: 676 HRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGL 734
T + + +PE + +S +DV++FG+++ EV + G+M D +
Sbjct: 161 SSVGT------KFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEV 214
Query: 735 LVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSIL 794
++K V + RP H + ++ +C PE RP+ +Q+LS +
Sbjct: 215 VLK-VSQGHRLYRP--------------HLASDTIYQIMYSCWHELPEKRPTFQQLLSSI 259
Query: 795 D 795
+
Sbjct: 260 E 260
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 25/212 (11%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G +G+VY V VAVK L E E+ F E + ++H NLV+L G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E ++ ++M +L L R E +A + +I ++A+ YL ++
Sbjct: 78 REPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQI----SSAMEYLEKK---N 129
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
IHRD+ N ++ + ++ DFGL+R + + ++ +F I
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-----TFTAHAGAKF----------PI 174
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ PES + KSDV++FG+++ E+ +
Sbjct: 175 KWTAPESLAYNKFSI-KSDVWAFGVLLWEIAT 205
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 114/267 (42%), Gaps = 32/267 (11%)
Query: 526 FGTAYQGFLDNHQY-VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGE 584
+G Y+G + V VK L F E + ++H NLVQL G CT +
Sbjct: 24 YGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVCTREPP 81
Query: 585 MLVIYDY-SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHR 643
+I ++ + +L +L N + +L + + ++SA+ YL + + IHR
Sbjct: 82 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSAMEYLEK---KNFIHR 133
Query: 644 NITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEA 703
++ + + + ++ F L+ +T + + + + + +PE + +
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMTGDTF------TAHAGAKFPIKWTAPESLAYNKF 187
Query: 704 TSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNH 763
+ +DV++FGV++ E+ T M+ P G+ +V+ EL++ E
Sbjct: 188 SIKSDVWAFGVLLWEIATYGMS---PYP-GIDPSQVY----------ELLEKDYRMERPE 233
Query: 764 KELMRLIKLGIACTLSNPELRPSMRQI 790
++ +L AC NP RPS +I
Sbjct: 234 GCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 25/212 (11%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G +G+VY V VAVK L E E+ F E + ++H NLV+L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E ++ ++M +L L R E A + +I ++A+ YL ++
Sbjct: 80 REPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQI----SSAMEYLEKK---N 131
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
IHRD+ N ++ + ++ DFGL+R + + + H I T
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLM-----------TGDTYTAHAGAKFPIKWTA 180
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PES + KSDV++FG+++ E+ +
Sbjct: 181 ----PESLAYNKFSI-KSDVWAFGVLLWEIAT 207
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 526 FGTAYQGFLDNHQY-VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGE 584
+G Y+G + V VK L F E + ++H NLVQL G CT +
Sbjct: 26 YGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVCTREPP 83
Query: 585 MLVIYDY-SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHR 643
+I ++ + +L +L N + +L + + ++SA+ YL + + IHR
Sbjct: 84 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLEK---KNFIHR 135
Query: 644 NITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEA 703
++ + + + ++ F L+ +T + + + + + + +PE + +
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAKFPIKWTAPESLAYNKF 189
Query: 704 TSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNH 763
+ +DV++FGV++ E+ T M+ P G+ + +V+ EL++ E
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMS---PYP-GIDLSQVY----------ELLEKDYRMERPE 235
Query: 764 KELMRLIKLGIACTLSNPELRPSMRQI 790
++ +L AC NP RPS +I
Sbjct: 236 GCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 25/212 (11%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G +G+VY V VAVK L E E+ F E + ++H NLV+L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E ++ ++M +L L R E A + +I ++A+ YL ++
Sbjct: 80 REPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQI----SSAMEYLEKK---N 131
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
IHRD+ N ++ + ++ DFGL+R + + + H I T
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLM-----------TGDTYTAHAGAKFPIKWT- 179
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PES + KSDV++FG+++ E+ +
Sbjct: 180 ---APESLAYNKFSI-KSDVWAFGVLLWEIAT 207
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 526 FGTAYQGFLDNHQY-VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGE 584
+G Y+G + V VK L F E + ++H NLVQL G CT +
Sbjct: 26 YGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVCTREPP 83
Query: 585 MLVIYDY-SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHR 643
+I ++ + +L +L N + +L + + ++SA+ YL + + IHR
Sbjct: 84 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLEK---KNFIHR 135
Query: 644 NITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEA 703
++ + + + ++ F L+ +T + + + + + + +PE + +
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAKFPIKWTAPESLAYNKF 189
Query: 704 TSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNH 763
+ +DV++FGV++ E+ T M+ P G+ + +V+ EL++ E
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMS---PYP-GIDLSQVY----------ELLEKDYRMERPE 235
Query: 764 KELMRLIKLGIACTLSNPELRPSMRQI 790
++ +L AC NP RPS +I
Sbjct: 236 GCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 25/212 (11%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G +G+VY V VAVK L E E+ F E + ++H NLV+L G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E ++ ++M +L L R E A + +I ++A+ YL ++
Sbjct: 82 REPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQI----SSAMEYLEKK---N 133
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
IHRD+ N ++ + ++ DFGL+R + + + H I T
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLM-----------TGDTYTAHAGAKFPIKWT- 181
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PES + KSDV++FG+++ E+ +
Sbjct: 182 ---APESLAYNKFSI-KSDVWAFGVLLWEIAT 209
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 526 FGTAYQGFLDNHQY-VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGE 584
+G Y+G + V VK L F E + ++H NLVQL G CT +
Sbjct: 28 YGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVCTREPP 85
Query: 585 MLVIYDY-SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHR 643
+I ++ + +L +L N + +L + + ++SA+ YL + + IHR
Sbjct: 86 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLEK---KNFIHR 137
Query: 644 NITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEA 703
++ + + + ++ F L+ +T + + + + + + +PE + +
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAKFPIKWTAPESLAYNKF 191
Query: 704 TSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNH 763
+ +DV++FGV++ E+ T M+ P G+ + +V+ EL++ E
Sbjct: 192 SIKSDVWAFGVLLWEIATYGMS---PYP-GIDLSQVY----------ELLEKDYRMERPE 237
Query: 764 KELMRLIKLGIACTLSNPELRPSMRQI 790
++ +L AC NP RPS +I
Sbjct: 238 GCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 25/212 (11%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G +G+VY V VAVK L E E+ F E + ++H NLV+L G C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E ++ ++M +L L R E A + +I ++A+ YL ++
Sbjct: 84 REPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQI----SSAMEYLEKK---N 135
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
IHRD+ N ++ + ++ DFGL+R + + + H I T
Sbjct: 136 FIHRDLAARNCLVGENHLVKVADFGLSRLM-----------TGDTYTAHAGAKFPIKWTA 184
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PES + KSDV++FG+++ E+ +
Sbjct: 185 ----PESLAYNKFSI-KSDVWAFGVLLWEIAT 211
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 526 FGTAYQGFLDNHQY-VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGE 584
+G Y+G + V VK L F E + ++H NLVQL G CT +
Sbjct: 30 YGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVCTREPP 87
Query: 585 MLVIYDY-SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHR 643
+I ++ + +L +L N + +L + + ++SA+ YL + + IHR
Sbjct: 88 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLEK---KNFIHR 139
Query: 644 NITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEA 703
++ + + + ++ F L+ +T + + + + + + +PE + +
Sbjct: 140 DLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAKFPIKWTAPESLAYNKF 193
Query: 704 TSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNH 763
+ +DV++FGV++ E+ T M+ P G+ + +V+ EL++ E
Sbjct: 194 SIKSDVWAFGVLLWEIATYGMS---PYP-GIDLSQVY----------ELLEKDYRMERPE 239
Query: 764 KELMRLIKLGIACTLSNPELRPSMRQI 790
++ +L AC NP RPS +I
Sbjct: 240 GCPEKVYELMRACWQWNPSDRPSFAEI 266
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 29/214 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G +G+VY V VAVK L E E+ F E + ++H NLV+L G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E ++ ++M +L L R E A + +I ++A+ YL ++
Sbjct: 81 REPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQI----SSAMEYLEKK---N 132
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGG-- 296
IHRD+ N ++ + ++ DFGL+R + + T G
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-----------------TXTAHAGAKF 175
Query: 297 TIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
I + PES + KSDV++FG+++ E+ +
Sbjct: 176 PIKWTAPESLAYNKFSI-KSDVWAFGVLLWEIAT 208
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 115/267 (43%), Gaps = 32/267 (11%)
Query: 526 FGTAYQGFLDNHQY-VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGE 584
+G Y+G + V VK L F E + ++H NLVQL G CT +
Sbjct: 27 YGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVCTREPP 84
Query: 585 MLVIYDY-SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHR 643
+I ++ + +L +L N + +L + + ++SA+ YL + + IHR
Sbjct: 85 FYIIIEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLEK---KNFIHR 136
Query: 644 NITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEA 703
++ + + + ++ F L+ +T + + + + + +PE + +
Sbjct: 137 DLAARNCLVGENHLVKVADFGLSRLMTGD------TXTAHAGAKFPIKWTAPESLAYNKF 190
Query: 704 TSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNH 763
+ +DV++FGV++ E+ T M+ P G+ + +V+ EL++ E
Sbjct: 191 SIKSDVWAFGVLLWEIATYGMS---PYP-GIDLSQVY----------ELLEKDYRMERPE 236
Query: 764 KELMRLIKLGIACTLSNPELRPSMRQI 790
++ +L AC NP RPS +I
Sbjct: 237 GCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 105/229 (45%), Gaps = 31/229 (13%)
Query: 110 SNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGER---FEKTFAAELVAVAHLR 166
S+ ++ E+LG GG +V+ A D VAVK L R F F E A L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 167 HRNLVRLRGWCVHEDQL----LLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIR 222
H +V + E +V +Y +D V R + + P+ ++ ++I
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEY-----VDGVTLR--DIVHTEGPMTPKRAIEVIA 123
Query: 223 GLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSAR 282
AL++ H+ IIHRDVK +N+M+ + ++ DFG+AR +
Sbjct: 124 DACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIA------------- 167
Query: 283 NHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
+ + +T + GT YL PE + SV A+SDV+S G V+ EV++G
Sbjct: 168 DSGNSVTQTAAVIGTAQYLSPEQARGDSV-DARSDVYSLGCVLYEVLTG 215
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 23/216 (10%)
Query: 534 LDNHQYVLVK--RLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEM------ 585
L +H+ V VK R +++ P+ RF E QN A L H +V + + T + E
Sbjct: 34 LRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV--YDTGEAETPAGPLP 91
Query: 586 LVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNI 645
++ +Y L ++ H G + +I A+ + H+ +IHR++
Sbjct: 92 YIVMEYVDGVTLRDIV----HTEGP--MTPKRAIEVIADACQALNFSHQNG---IIHRDV 142
Query: 646 TSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATS 705
+ I + ++ F +A + D G+ + + +V G Y+SPE +
Sbjct: 143 KPANIMISATNAVKVMDFGIARAIA--DSGN--SVTQTAAVIGTAQYLSPEQARGDSVDA 198
Query: 706 MADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHE 741
+DVYS G V+ EV+TG+ P + + V E
Sbjct: 199 RSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 106/230 (46%), Gaps = 36/230 (15%)
Query: 119 LGSGGFGKVYRAVL-------PSDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHL-RHRN 169
LG G FG+V A P + VAVK L + E+ +E+ + + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVL-FRRPENLEAAAPLNWEQRKKII------- 221
++ L G C + L ++ +Y +L L RRP +E + +N +++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 222 -RGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSS 280
LA + YL Q + IHRD+ NV++ ++ DFGLAR + + + +T++
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDXXKKTTN 218
Query: 281 ARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
R + ++ PE+ V T +SDV+SFG+++ E+ +
Sbjct: 219 GRL-------------PVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFT 254
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 107/238 (44%), Gaps = 32/238 (13%)
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLL----------FHNNHRIGHSILQWHH 617
+H+N++ L G CT+ G + VI +Y++ L L ++ +R+ + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 618 RYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHR 677
+ LA + YL +++ IHR++ + + + + ++ F LA + D +
Sbjct: 159 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDX-XK 214
Query: 678 KATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVK 737
K T+G V+ +M+PE + T +DV+SFGV++ E+ T + +P L K
Sbjct: 215 KTTNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270
Query: 738 RVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
+ E +P +L + +MR C + P RP+ +Q++ LD
Sbjct: 271 LLKEGHRMDKPANCTNELYM--------MMR------DCWHAVPSQRPTFKQLVEDLD 314
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 25/212 (11%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G +G+VY V VAVK L E E+ F E + ++H NLV+L G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E ++ ++M +L L R E A + +I ++A+ YL ++
Sbjct: 81 REPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQI----SSAMEYLEKK---N 132
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
IHRD+ N ++ + ++ DFGL+R + + ++ +F I
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-----TYTAPAGAKF----------PI 177
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ PES + KSDV++FG+++ E+ +
Sbjct: 178 KWTAPESLAYNKFSI-KSDVWAFGVLLWEIAT 208
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 117/267 (43%), Gaps = 32/267 (11%)
Query: 526 FGTAYQGFLDNHQY-VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGE 584
+G Y+G + V VK L F E + ++H NLVQL G CT +
Sbjct: 27 YGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVCTREPP 84
Query: 585 MLVIYDY-SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHR 643
+I ++ + +L +L N + +L + + ++SA+ YL + + IHR
Sbjct: 85 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLEK---KNFIHR 136
Query: 644 NITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEA 703
++ + + + ++ F L+ +T + + A +G + + +PE + +
Sbjct: 137 DLAARNCLVGENHLVKVADFGLSRLMTGDTY---TAPAG---AKFPIKWTAPESLAYNKF 190
Query: 704 TSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNH 763
+ +DV++FGV++ E+ T M+ P G+ + +V+ EL++ E
Sbjct: 191 SIKSDVWAFGVLLWEIATYGMS---PYP-GIDLSQVY----------ELLEKDYRMERPE 236
Query: 764 KELMRLIKLGIACTLSNPELRPSMRQI 790
++ +L AC NP RPS +I
Sbjct: 237 GCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 25/212 (11%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G +G+VY V VAVK L E E+ F E + ++H NLV+L G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E ++ ++M +L L R E A + +I ++A+ YL ++
Sbjct: 82 REPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQI----SSAMEYLEKK---N 133
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
IHRD+ N ++ + ++ DFGL+R + + ++ +F I
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-----TYTAPAGAKF----------PI 178
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ PES + KSDV++FG+++ E+ +
Sbjct: 179 KWTAPESLAYNKFSI-KSDVWAFGVLLWEIAT 209
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 117/267 (43%), Gaps = 32/267 (11%)
Query: 526 FGTAYQGFLDNHQY-VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGE 584
+G Y+G + V VK L F E + ++H NLVQL G CT +
Sbjct: 28 YGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVCTREPP 85
Query: 585 MLVIYDY-SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHR 643
+I ++ + +L +L N + +L + + ++SA+ YL + + IHR
Sbjct: 86 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLEK---KNFIHR 137
Query: 644 NITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEA 703
++ + + + ++ F L+ +T + + A +G + + +PE + +
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMTGDTY---TAPAG---AKFPIKWTAPESLAYNKF 191
Query: 704 TSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNH 763
+ +DV++FGV++ E+ T M+ P G+ + +V+ EL++ E
Sbjct: 192 SIKSDVWAFGVLLWEIATYGMS---PYP-GIDLSQVY----------ELLEKDYRMERPE 237
Query: 764 KELMRLIKLGIACTLSNPELRPSMRQI 790
++ +L AC NP RPS +I
Sbjct: 238 GCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 29/214 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G +G+VY V VAVK L E E+ F E + ++H NLV+L G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E ++ ++M +L L R E A + +I ++A+ YL ++
Sbjct: 85 REPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQI----SSAMEYLEKK---N 136
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGG-- 296
IHRD+ N ++ + ++ DFGL+R + + T G
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-----------------TXTAHAGAKF 179
Query: 297 TIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
I + PES + KSDV++FG+++ E+ +
Sbjct: 180 PIKWTAPESLAYNKFSI-KSDVWAFGVLLWEIAT 212
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 115/267 (43%), Gaps = 32/267 (11%)
Query: 526 FGTAYQGFLDNHQY-VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGE 584
+G Y+G + V VK L F E + ++H NLVQL G CT +
Sbjct: 31 YGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVCTREPP 88
Query: 585 MLVIYDY-SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHR 643
+I ++ + +L +L N + +L + + ++SA+ YL + + IHR
Sbjct: 89 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLEK---KNFIHR 140
Query: 644 NITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEA 703
++ + + + ++ F L+ +T + + + + + +PE + +
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGD------TXTAHAGAKFPIKWTAPESLAYNKF 194
Query: 704 TSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNH 763
+ +DV++FGV++ E+ T M+ P G+ + +V+ EL++ E
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMS---PYP-GIDLSQVY----------ELLEKDYRMERPE 240
Query: 764 KELMRLIKLGIACTLSNPELRPSMRQI 790
++ +L AC NP RPS +I
Sbjct: 241 GCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 102/221 (46%), Gaps = 36/221 (16%)
Query: 119 LGSGGFGKV----YRAVLPSDGTVVAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVRL 173
LG G FGKV Y G +VAVK L E G + + E+ + L H ++V+
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 174 RGWCVHEDQ----LLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
+G C EDQ + LV +Y+P SL L R L A L + Q +I G+A
Sbjct: 76 KGCC--EDQGEKSVQLVMEYVPLGSLRDYLPRHCVGL--AQLLLFAQ--QICEGMA---- 125
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
YLH Q IHR + NV+LD+ ++GDFGLA+ + +Y + F A
Sbjct: 126 YLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 182
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PE ++ A SDV+SFG+ + E+++
Sbjct: 183 -------------PECLKECKFYYA-SDVWSFGVTLYELLT 209
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 16/184 (8%)
Query: 540 VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLV--IYDYSATRIL 597
V VK L P LR+ + E++ L L H ++V+ G C +QGE V + +Y L
Sbjct: 40 VAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL 99
Query: 598 SHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMN 657
L H +G + L + + + YLH + IHR + + + LD D
Sbjct: 100 RDYL--PRHCVGLAQLLL-----FAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRL 149
Query: 658 PRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVL 717
++G F LA+ + +R G+ V F Y +PE ++ + +DV+SFGV +
Sbjct: 150 VKIGDFGLAKAVPEGHEYYRVREDGDSPV---FWY-APECLKECKFYYASDVWSFGVTLY 205
Query: 718 EVVT 721
E++T
Sbjct: 206 ELLT 209
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 104/245 (42%), Gaps = 36/245 (14%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAELVAVAHLRHRN 169
F +LG G F VYRA G VA+K + +K + E+ L+H +
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++ L + + + LV + N ++R L R P + + + + + +
Sbjct: 73 ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNR------VKPFSENEARHFMHQIITGML 126
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLE--HELQYQMRTSSARNHQFH 287
YLH I+HRD+ SN++L N ++ DFGLA L+ HE Y +
Sbjct: 127 YLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTL----------- 172
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD---LTYPDDQI 344
GT Y+ PE + S +SDV+S G + ++ GR D + +++
Sbjct: 173 -------CGTPNYISPEIATR-SAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKV 224
Query: 345 ILLDW 349
+L D+
Sbjct: 225 VLADY 229
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 10/115 (8%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ + +LYLH + ++HR++T S + L +MN ++ F LA L H
Sbjct: 121 IITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKH-------Y 170
Query: 685 SVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRV 739
++ G Y+SPE +DV+S G + ++ G+ D + L K V
Sbjct: 171 TLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV 225
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 33/229 (14%)
Query: 117 EVLGSGGFGKVYRAVL--PSDG---TVVAVKCLAEKGE-RFEKTFAAELVAVAHLRHRNL 170
E LG FGKVY+ L P+ G VA+K L +K E + F E + A L+H N+
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKK---------II 221
V L G + L +++ Y + L L R + + + + K ++
Sbjct: 75 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134
Query: 222 RGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSA 281
+AA + YL ++H+D+ T NV++ + N ++ D GL R + Y++ +S
Sbjct: 135 AQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 191
Query: 282 RNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
I ++ PE+ G + SD++S+G+V+ EV S
Sbjct: 192 L--------------PIRWMAPEAIMYGKFSI-DSDIWSYGVVLWEVFS 225
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 105/233 (45%), Gaps = 26/233 (11%)
Query: 505 FKEIISATNNFSESQRVAEMDFGTAYQGFL------DNHQYVLVKRLGMSKCPALRTRFS 558
KEI + F E + E FG Y+G L + Q V +K L LR F
Sbjct: 3 LKEISLSAVRFME--ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 60
Query: 559 NELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFH----------NNHRI 608
+E ARL+H N+V L G T+ + +I+ Y + L L ++ R
Sbjct: 61 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 120
Query: 609 GHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEF 668
S L+ +++ +A+ + YL + V+H+++ + + + +N ++ L
Sbjct: 121 VKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFRE 177
Query: 669 LTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
+ D+ ++ + +R +M+PE I G+ + +D++S+GVV+ EV +
Sbjct: 178 VYAADY-YKLLGNSLLPIR----WMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 102/221 (46%), Gaps = 36/221 (16%)
Query: 119 LGSGGFGKV----YRAVLPSDGTVVAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVRL 173
LG G FGKV Y G +VAVK L E G + + E+ + L H ++V+
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 174 RGWCVHEDQ----LLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
+G C EDQ + LV +Y+P SL L R L A L + Q +I G+A
Sbjct: 77 KGCC--EDQGEKSVQLVMEYVPLGSLRDYLPRHCVGL--AQLLLFAQ--QICEGMA---- 126
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
YLH Q IHR + NV+LD+ ++GDFGLA+ + +Y + F A
Sbjct: 127 YLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 183
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PE ++ A SDV+SFG+ + E+++
Sbjct: 184 -------------PECLKECKFYYA-SDVWSFGVTLYELLT 210
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 16/184 (8%)
Query: 540 VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLV--IYDYSATRIL 597
V VK L P LR+ + E++ L L H ++V+ G C +QGE V + +Y L
Sbjct: 41 VAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL 100
Query: 598 SHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMN 657
L H +G + L + + + YLH + IHR + + + LD D
Sbjct: 101 RDYL--PRHCVGLAQLLL-----FAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRL 150
Query: 658 PRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVL 717
++G F LA+ + +R G+ V F Y +PE ++ + +DV+SFGV +
Sbjct: 151 VKIGDFGLAKAVPEGHEYYRVREDGDSPV---FWY-APECLKECKFYYASDVWSFGVTLY 206
Query: 718 EVVT 721
E++T
Sbjct: 207 ELLT 210
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 33/229 (14%)
Query: 117 EVLGSGGFGKVYRAVL--PSDG---TVVAVKCLAEKGE-RFEKTFAAELVAVAHLRHRNL 170
E LG FGKVY+ L P+ G VA+K L +K E + F E + A L+H N+
Sbjct: 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 91
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKK---------II 221
V L G + L +++ Y + L L R + + + + K ++
Sbjct: 92 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 151
Query: 222 RGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSA 281
+AA + YL ++H+D+ T NV++ + N ++ D GL R + Y++ +S
Sbjct: 152 AQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 208
Query: 282 RNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
I ++ PE+ G + SD++S+G+V+ EV S
Sbjct: 209 L--------------PIRWMAPEAIMYGKFSI-DSDIWSYGVVLWEVFS 242
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 109/242 (45%), Gaps = 26/242 (10%)
Query: 496 MVETPREISFKEIISATNNFSESQRVAEMDFGTAYQGFL------DNHQYVLVKRLGMSK 549
++ ++ KEI + F E + E FG Y+G L + Q V +K L
Sbjct: 11 LINQHKQAKLKEISLSAVRFME--ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA 68
Query: 550 CPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFH------ 603
LR F +E ARL+H N+V L G T+ + +I+ Y + L L
Sbjct: 69 EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSD 128
Query: 604 ----NNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPR 659
++ R S L+ +++ +A+ + YL + V+H+++ + + + +N +
Sbjct: 129 VGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVK 185
Query: 660 LGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEV 719
+ L + D+ ++ + +R +M+PE I G+ + +D++S+GVV+ EV
Sbjct: 186 ISDLGLFREVYAADY-YKLLGNSLLPIR----WMAPEAIMYGKFSIDSDIWSYGVVLWEV 240
Query: 720 VT 721
+
Sbjct: 241 FS 242
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 131/321 (40%), Gaps = 59/321 (18%)
Query: 119 LGSGGFGKVY----RAVLPSDG-TVVAVKCLAEKGERFEKT-FAAELVAVAHLRHRNLVR 172
LG G FG VY R ++ + T VAVK + E E+ F E + ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 173 LRGWCVHEDQLLLVYDYMPN---RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
L G L+V + M + +S R L EN P ++ ++ +A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
YL+ + + +HRD+ N M+ + ++GDFG+ R +
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE------------------T 183
Query: 290 ETTRIGGTIGYLP-----PESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQI 344
+ R GG G LP PES + G V T SD++SFG+V+ E+ S ++Q+
Sbjct: 184 DXXRKGGK-GLLPVRWMAPESLKDG-VFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV 241
Query: 345 ILLDWIRRLSDEGKVLQAGDN---RLSDGSYKLCDMEXXXXXXXXXXXXNPHLRPSMKWV 401
+ + +G L DN R++D ++C NP++RP+ +
Sbjct: 242 L------KFVMDGGYLDQPDNCPERVTD-LMRMC------------WQFNPNMRPTFLEI 282
Query: 402 IEAVSGSYSGKLPALPSFQSH 422
+ + P + F S
Sbjct: 283 VNLLKDDLHPSFPEVSFFHSE 303
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 116/279 (41%), Gaps = 32/279 (11%)
Query: 526 FGTAYQGFL------DNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWC 579
FG Y+G + V VK + S R F NE + ++V+L G
Sbjct: 30 FGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVV 89
Query: 580 TEQGEMLVIYDYSA----TRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEE 635
++ LV+ + A L L + G + +A + YL+ +
Sbjct: 90 SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK 149
Query: 636 WNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSP 695
+ +HR++ + + D ++G F + + D RK G VR +M+P
Sbjct: 150 ---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDX-XRKGGKGLLPVR----WMAP 201
Query: 696 EYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDL 755
E ++ G T+ +D++SFGVV+ E+ + + + +GL ++V +F +D
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSNEQVLKFVMD----GGYLDQ 253
Query: 756 SLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSIL 794
N +LMR+ C NP +RP+ +I+++L
Sbjct: 254 PDNCPERVTDLMRM------CWQFNPNMRPTFLEIVNLL 286
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 108/229 (47%), Gaps = 44/229 (19%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG+G FG+V+ + T VA+K L + G ++F E + L+H LV+L V
Sbjct: 17 LGNGQFGEVWMGTW-NGNTKVAIKTL-KPGTMSPESFLEEAQIMKKLKHDKLVQLYA-VV 73
Query: 179 HEDQLLLVYDYMPNRSLDRVL-------FRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
E+ + +V +YM SL L + P ++ AA +AA + Y+
Sbjct: 74 SEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAA------------QVAAGMAYI 121
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
IHRD++++N+++ + ++ DFGLAR +E ++ + +F
Sbjct: 122 ERM---NYIHRDLRSANILVGNGLICKIADFGLARLIEDN-----EXTARQGAKF----- 168
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
I + PE+ G T KSDV+SFGI++ E+V+ R + YP
Sbjct: 169 -----PIKWTAPEAALYGRF-TIKSDVWSFGILLTELVTKGR---VPYP 208
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 119/280 (42%), Gaps = 36/280 (12%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGW 578
+R+ FG + G + + V +K L F E Q + +L+H LVQL
Sbjct: 15 KRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSP--ESFLEEAQIMKKLKHDKLVQLYAV 72
Query: 579 CTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNE 638
+E+ + ++ +Y L L R L+ + ++ +A+ + Y+
Sbjct: 73 VSEE-PIYIVTEYMNKGSLLDFLKDGEGRA----LKLPNLVDMAAQVAAGMAYIE---RM 124
Query: 639 QVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYI 698
IHR++ S+ I + + ++ F LA + N+ R+ + + +PE
Sbjct: 125 NYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGA------KFPIKWTAPEAA 178
Query: 699 ESGEATSMADVYSFGVVVLEVVTGQMAVDFRLP-EGLLVKRVHEFEAR--KRPLAELVDL 755
G T +DV+SFG+++ E+VT R+P G+ + V E R + P + +
Sbjct: 179 LYGRFTIKSDVWSFGILLTELVTKG-----RVPYPGMNNREVLEQVERGYRMPCPQDCPI 233
Query: 756 SLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
SL+ ELM I C +PE RP+ + S L+
Sbjct: 234 SLH------ELM------IHCWKKDPEERPTFEYLQSFLE 261
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 130/320 (40%), Gaps = 59/320 (18%)
Query: 119 LGSGGFGKVY----RAVLPSDG-TVVAVKCLAEKGERFEKT-FAAELVAVAHLRHRNLVR 172
LG G FG VY R ++ + T VAVK + E E+ F E + ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 173 LRGWCVHEDQLLLVYDYMPN---RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
L G L+V + M + +S R L EN P ++ ++ +A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
YL+ + + +HRD+ N M+ + ++GDFG+ R + Y
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYY--------------- 186
Query: 290 ETTRIGGTIGYLP-----PESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQI 344
R GG G LP PES + G V T SD++SFG+V+ E+ S ++Q+
Sbjct: 187 ---RKGGK-GLLPVRWMAPESLKDG-VFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV 241
Query: 345 ILLDWIRRLSDEGKVLQAGDN---RLSDGSYKLCDMEXXXXXXXXXXXXNPHLRPSMKWV 401
+ + +G L DN R++D ++C NP +RP+ +
Sbjct: 242 L------KFVMDGGYLDQPDNCPERVTD-LMRMC------------WQFNPKMRPTFLEI 282
Query: 402 IEAVSGSYSGKLPALPSFQS 421
+ + P + F S
Sbjct: 283 VNLLKDDLHPSFPEVSFFHS 302
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 118/279 (42%), Gaps = 32/279 (11%)
Query: 526 FGTAYQGFL------DNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWC 579
FG Y+G + V VK + S R F NE + ++V+L G
Sbjct: 30 FGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVV 89
Query: 580 TEQGEMLVIYDYSA----TRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEE 635
++ LV+ + A L L + G + +A + YL+ +
Sbjct: 90 SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK 149
Query: 636 WNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSP 695
+ +HR++ + + D ++G F + + + +RK G VR +M+P
Sbjct: 150 ---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAY-YRKGGKGLLPVR----WMAP 201
Query: 696 EYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDL 755
E ++ G T+ +D++SFGVV+ E+ + + + +GL ++V +F +D
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSNEQVLKFVMD----GGYLDQ 253
Query: 756 SLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSIL 794
N +LMR+ C NP++RP+ +I+++L
Sbjct: 254 PDNCPERVTDLMRM------CWQFNPKMRPTFLEIVNLL 286
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 133/322 (41%), Gaps = 63/322 (19%)
Query: 119 LGSGGFGKVY----RAVLPSDG-TVVAVKCLAEKG---ERFEKTFAAELVAVAHLRHRNL 170
LG G FG VY R ++ + T VAVK + E ER E F E + ++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE--FLNEASVMKGFTCHHV 81
Query: 171 VRLRGWCVHEDQLLLVYDYMPN---RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
VRL G L+V + M + +S R L EN P ++ ++ +A
Sbjct: 82 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
+ YL+ + + +HRD+ N M+ + ++GDFG+ R + +E Y
Sbjct: 142 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI-YETDYY------------ 185
Query: 288 LAETTRIGGTIGYLP-----PESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDD 342
R GG G LP PES + G V T SD++SFG+V+ E+ S ++
Sbjct: 186 -----RKGGK-GLLPVRWMAPESLKDG-VFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 238
Query: 343 QIILLDWIRRLSDEGKVLQAGDN---RLSDGSYKLCDMEXXXXXXXXXXXXNPHLRPSMK 399
Q++ + +G L DN R++D ++C NP +RP+
Sbjct: 239 QVL------KFVMDGGYLDQPDNCPERVTD-LMRMC------------WQFNPKMRPTFL 279
Query: 400 WVIEAVSGSYSGKLPALPSFQS 421
++ + P + F S
Sbjct: 280 EIVNLLKDDLHPSFPEVSFFHS 301
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 119/279 (42%), Gaps = 32/279 (11%)
Query: 526 FGTAYQGFL------DNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWC 579
FG Y+G + V VK + S R F NE + ++V+L G
Sbjct: 29 FGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVV 88
Query: 580 TEQGEMLVIYDYSA----TRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEE 635
++ LV+ + A L L + G + +A + YL+ +
Sbjct: 89 SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK 148
Query: 636 WNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSP 695
+ +HR++ + + D ++G F + + D+ +RK G VR +M+P
Sbjct: 149 ---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDY-YRKGGKGLLPVR----WMAP 200
Query: 696 EYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDL 755
E ++ G T+ +D++SFGVV+ E+ + + + +GL ++V +F +D
Sbjct: 201 ESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSNEQVLKFVMD----GGYLDQ 252
Query: 756 SLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSIL 794
N +LMR+ C NP++RP+ +I+++L
Sbjct: 253 PDNCPERVTDLMRM------CWQFNPKMRPTFLEIVNLL 285
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 27/212 (12%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG+G FG V V A+K + E G E F E + +L H LV+L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDV-AIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
+ + ++ +YM N L L + +Q ++ + + A+ YL + Q
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQT------QQLLEMCKDVCEAMEYLESK---Q 125
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
+HRD+ N +++ Q ++ DFGL+R++ + +S+ +F +
Sbjct: 126 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-----EYTSSVGSKF----------PV 170
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ PPE S ++KSD+++FG+++ E+ S
Sbjct: 171 RWSPPEVLMY-SKFSSKSDIWAFGVLMWEIYS 201
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 15/169 (8%)
Query: 557 FSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWH 616
F E + + L H LVQL G CT+Q + +I +Y A L + L HR Q
Sbjct: 51 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-----FQTQ 105
Query: 617 HRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGH 676
+ K + A+ YL ++Q +HR++ + ++ ++ F L+ ++ D +
Sbjct: 106 QLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL--DDEY 160
Query: 677 RKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQM 724
+ VR + PE + + +S +D+++FGV++ E+ + G+M
Sbjct: 161 TSSVGSKFPVR----WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM 205
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 29/221 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
F + E +G G FG+V++ + VVA+K + E+ E + E+ ++ +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
+ G + + +L ++ +Y+ S +L PL+ Q I+R + L YL
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLL--------EPGPLDETQIATILREILKGLDYL 140
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
H + + IHRD+K +NV+L +L DFG+A Q+ + + + F
Sbjct: 141 HSE---KKIHRDIKAANVLLSEHGEVKLADFGVAG--------QLTDTQIKRNTFV---- 185
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
GT ++ PE K S +K+D++S GI +E+ G
Sbjct: 186 ----GTPFWMAPEVI-KQSAYDSKADIWSLGITAIELARGE 221
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 118/292 (40%), Gaps = 61/292 (20%)
Query: 515 FSESQRVAEMDFGTAYQGFLDN--HQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNL 572
F++ +++ + FG ++G +DN + V +K + + + E+ L++ +
Sbjct: 29 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 87
Query: 573 VQLCGWCTEQGEMLVIYDY----SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASA 628
+ G + ++ +I +Y SA +L L I++ +
Sbjct: 88 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-----------GPLDETQIATILREILKG 136
Query: 629 ILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRG 688
+ YLH +E+ IHR+I ++ + L +L F +A LT D ++ T G
Sbjct: 137 LDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNT-----FVG 186
Query: 689 IFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ--------MAVDFRLPEGLLVKRVH 740
+M+PE I+ S AD++S G+ +E+ G+ M V F +P+
Sbjct: 187 TPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN----NPP 242
Query: 741 EFEAR-KRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQIL 791
E +PL E V+ LN E P RP+ +++L
Sbjct: 243 TLEGNYSKPLKEFVEACLNKE--------------------PSFRPTAKELL 274
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 130/321 (40%), Gaps = 59/321 (18%)
Query: 119 LGSGGFGKVY----RAVLPSDG-TVVAVKCLAEKGERFEKT-FAAELVAVAHLRHRNLVR 172
LG G FG VY R ++ + T VAVK + E E+ F E + ++VR
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 173 LRGWCVHEDQLLLVYDYMPN---RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
L G L+V + M + +S R L EN P ++ ++ +A +
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
YL+ + + +HRD+ N M+ + ++GDFG+ R +
Sbjct: 142 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE------------------T 180
Query: 290 ETTRIGGTIGYLP-----PESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQI 344
+ R GG G LP PES + G V T SD++SFG+V+ E+ S ++Q+
Sbjct: 181 DXXRKGGK-GLLPVRWMAPESLKDG-VFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV 238
Query: 345 ILLDWIRRLSDEGKVLQAGDN---RLSDGSYKLCDMEXXXXXXXXXXXXNPHLRPSMKWV 401
+ + +G L DN R++D ++C NP +RP+ +
Sbjct: 239 L------KFVMDGGYLDQPDNCPERVTD-LMRMC------------WQFNPKMRPTFLEI 279
Query: 402 IEAVSGSYSGKLPALPSFQSH 422
+ + P + F S
Sbjct: 280 VNLLKDDLHPSFPEVSFFHSE 300
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 117/279 (41%), Gaps = 32/279 (11%)
Query: 526 FGTAYQGFL------DNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWC 579
FG Y+G + V VK + S R F NE + ++V+L G
Sbjct: 27 FGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVV 86
Query: 580 TEQGEMLVIYDYSA----TRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEE 635
++ LV+ + A L L + G + +A + YL+ +
Sbjct: 87 SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK 146
Query: 636 WNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSP 695
+ +HR++ + + D ++G F + + D RK G VR +M+P
Sbjct: 147 ---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDX-XRKGGKGLLPVR----WMAP 198
Query: 696 EYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDL 755
E ++ G T+ +D++SFGVV+ E+ + + + +GL ++V +F +D
Sbjct: 199 ESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSNEQVLKFVMD----GGYLDQ 250
Query: 756 SLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSIL 794
N +LMR+ C NP++RP+ +I+++L
Sbjct: 251 PDNCPERVTDLMRM------CWQFNPKMRPTFLEIVNLL 283
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 29/220 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
F + E +G G FG+V++ + VVA+K + E+ E + E+ ++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
+ G + + +L ++ +Y+ S +L PL+ Q I+R + L YL
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLL--------EPGPLDETQIATILREILKGLDYL 120
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
H + + IHRD+K +NV+L +L DFG+A Q+ + + + F
Sbjct: 121 HSE---KKIHRDIKAANVLLSEHGEVKLADFGVAG--------QLTDTQIKRNTFV---- 165
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
GT ++ PE K S +K+D++S GI +E+ G
Sbjct: 166 ----GTPFWMAPEVI-KQSAYDSKADIWSLGITAIELARG 200
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 128/318 (40%), Gaps = 63/318 (19%)
Query: 515 FSESQRVAEMDFGTAYQGFLDN--HQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNL 572
F++ +++ + FG ++G +DN + V +K + + + E+ L++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 573 VQLCGWCTEQGEMLVIYDY----SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASA 628
+ G + ++ +I +Y SA +L L I++ +
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-----------GPLDETQIATILREILKG 116
Query: 629 ILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRG 688
+ YLH +E+ IHR+I ++ + L +L F +A LT D ++ T G
Sbjct: 117 LDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNT-----FVG 166
Query: 689 IFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ--------MAVDFRLPEGLLVKRVH 740
+M+PE I+ S AD++S G+ +E+ G+ M V F +P+
Sbjct: 167 TPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN----NPP 222
Query: 741 EFEAR-KRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQIL--SILDGN 797
E +PL E V+ LN E P RP+ +++L + N
Sbjct: 223 TLEGNYSKPLKEFVEACLNKE--------------------PSFRPTAKELLKHKFILRN 262
Query: 798 DKRFMEDGQMTENLEEWK 815
K+ ++ + + WK
Sbjct: 263 AKKTSYLTELIDRYKRWK 280
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 29/218 (13%)
Query: 119 LGSGGFGKV----YRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLR 174
LG G FG V Y + + G +VAVK L G ++ F E+ + L +V+ R
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 175 G--WCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
G + +L LV +Y+P+ L L R L+A+ L + +I +G+ YL
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYS--SQICKGM----EYLG 128
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETT 292
+ + +HRD+ N++++S+ + ++ DFGLA+ L + + ++ F A
Sbjct: 129 SR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYA--- 182
Query: 293 RIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PES ++ + +SDV+SFG+V+ E+ +
Sbjct: 183 ----------PESLSD-NIFSRQSDVWSFGVVLYELFT 209
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 15/184 (8%)
Query: 540 VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQG--EMLVIYDYSATRIL 597
V VK+L S P + F E+Q L L +V+ G G E+ ++ +Y + L
Sbjct: 39 VAVKQLQHSG-PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCL 97
Query: 598 SHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMN 657
L + R+ S L + + + YL + + +HR++ + I ++ + +
Sbjct: 98 RDFLQRHRARLDASRLLLYS-----SQICKGMEYLG---SRRCVHRDLAARNILVESEAH 149
Query: 658 PRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVL 717
++ F LA+ L + G IF Y +PE + + +DV+SFGVV+
Sbjct: 150 VKIADFGLAKLLPLDKDXXVVREPGQSP---IFWY-APESLSDNIFSRQSDVWSFGVVLY 205
Query: 718 EVVT 721
E+ T
Sbjct: 206 ELFT 209
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 27/212 (12%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG+G FG V V A+K + E G E F E + +L H LV+L G C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDV-AIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
+ + ++ +YM N L L + +Q ++ + + A+ YL + Q
Sbjct: 74 KQRPIFIITEYMANGCLLNYLREMRHRFQT------QQLLEMCKDVCEAMEYLESK---Q 124
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
+HRD+ N +++ Q ++ DFGL+R++ + +S+ +F +
Sbjct: 125 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-----EYTSSVGSKF----------PV 169
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ PPE S ++KSD+++FG+++ E+ S
Sbjct: 170 RWSPPEVLMY-SKFSSKSDIWAFGVLMWEIYS 200
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 15/169 (8%)
Query: 557 FSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWH 616
F E + + L H LVQL G CT+Q + +I +Y A L + L HR Q
Sbjct: 50 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-----FQTQ 104
Query: 617 HRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGH 676
+ K + A+ YL ++Q +HR++ + ++ ++ F L+ ++ D +
Sbjct: 105 QLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL--DDEY 159
Query: 677 RKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQM 724
+ VR + PE + + +S +D+++FGV++ E+ + G+M
Sbjct: 160 TSSVGSKFPVR----WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM 204
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 27/212 (12%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG+G FG V V A+K + E G E F E + +L H LV+L G C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDV-AIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
+ + ++ +YM N L L + +Q ++ + + A+ YL + Q
Sbjct: 81 KQRPIFIITEYMANGCLLNYLREMRHRFQT------QQLLEMCKDVCEAMEYLESK---Q 131
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
+HRD+ N +++ Q ++ DFGL+R++ + +S+ +F +
Sbjct: 132 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-----EYTSSVGSKF----------PV 176
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ PPE S ++KSD+++FG+++ E+ S
Sbjct: 177 RWSPPEVLMY-SKFSSKSDIWAFGVLMWEIYS 207
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 15/169 (8%)
Query: 557 FSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWH 616
F E + + L H LVQL G CT+Q + +I +Y A L + L HR Q
Sbjct: 57 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-----FQTQ 111
Query: 617 HRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGH 676
+ K + A+ YL ++Q +HR++ + ++ ++ F L+ ++ D +
Sbjct: 112 QLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL--DDEY 166
Query: 677 RKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQM 724
+ VR + PE + + +S +D+++FGV++ E+ + G+M
Sbjct: 167 TSSVGSKFPVR----WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM 211
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 122/303 (40%), Gaps = 57/303 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTV-------VAVKCLAEKGERFEKT-FAAELVAVAHLRHRNL 170
LG G FG VY V + G V VA+K + E E+ F E + ++
Sbjct: 20 LGQGSFGMVYEGV--AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 77
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFR-RPE--NLEAAAPLNWEQRKKIIRGLAAA 227
VRL G L++ + M L L RPE N AP + + ++ +A
Sbjct: 78 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
+ YL+ + +HRD+ N + + ++GDFG+ R +
Sbjct: 138 MAYLNA---NKFVHRDLAARNCXVAEDFTVKIGDFGMTR------------------DIY 176
Query: 288 LAETTRIGGTIGYLP-----PESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDD 342
+ R GG G LP PES + G V T SDV+SFG+V+ E+ + ++
Sbjct: 177 ETDYYRKGGK-GLLPVRWMSPESLKDG-VFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 234
Query: 343 QIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEXXXXXXXXXXXXNPHLRPSMKWVI 402
Q++ R EG +L DN D +L M NP +RPS +I
Sbjct: 235 QVL------RFVMEGGLLDKPDN-CPDMLLELMRM---------CWQYNPKMRPSFLEII 278
Query: 403 EAV 405
++
Sbjct: 279 SSI 281
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 128/307 (41%), Gaps = 40/307 (13%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFL------DNHQYVLVKRLGMSKCPALRTRFSNELQNL 564
A + S+ + + FG Y+G + V +K + + R F NE +
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 565 ARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLL------FHNNHRIGHSILQWHHR 618
++V+L G ++ LVI + L L NN + L
Sbjct: 70 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KM 127
Query: 619 YNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRK 678
+ +A + YL+ + +HR++ + + D ++G F + + D+ +RK
Sbjct: 128 IQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDY-YRK 183
Query: 679 ATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKR 738
G VR +MSPE ++ G T+ +DV+SFGVV+ E+ T + + +GL ++
Sbjct: 184 GGKGLLPVR----WMSPESLKDGVFTTYSDVWSFGVVLWEIAT----LAEQPYQGLSNEQ 235
Query: 739 VHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGND 798
V F L+D N ELMR+ C NP++RPS +I+S +
Sbjct: 236 VLRFVME----GGLLDKPDNCPDMLLELMRM------CWQYNPKMRPSFLEIISSI---- 281
Query: 799 KRFMEDG 805
K ME G
Sbjct: 282 KEEMEPG 288
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 29/220 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
F + E +G G FG+V++ + VVA+K + E+ E + E+ ++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
+ G + + +L ++ +Y+ S +L PL+ Q I+R + L YL
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLL--------EPGPLDETQIATILREILKGLDYL 120
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
H + + IHRD+K +NV+L +L DFG+A Q+ + + + F
Sbjct: 121 HSE---KKIHRDIKAANVLLSEHGEVKLADFGVAG--------QLTDTQIKRNXFV---- 165
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
GT ++ PE K S +K+D++S GI +E+ G
Sbjct: 166 ----GTPFWMAPEVI-KQSAYDSKADIWSLGITAIELARG 200
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 116/292 (39%), Gaps = 61/292 (20%)
Query: 515 FSESQRVAEMDFGTAYQGFLDN--HQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNL 572
F++ +++ + FG ++G +DN + V +K + + + E+ L++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 573 VQLCGWCTEQGEMLVIYDY----SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASA 628
+ G + ++ +I +Y SA +L L I++ +
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-----------GPLDETQIATILREILKG 116
Query: 629 ILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRG 688
+ YLH +E+ IHR+I ++ + L +L F +A LT N V
Sbjct: 117 LDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ------IKRNXFVGT 167
Query: 689 IFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ--------MAVDFRLPEGLLVKRVH 740
F +M+PE I+ S AD++S G+ +E+ G+ M V F +P+
Sbjct: 168 PF-WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN----NPP 222
Query: 741 EFEAR-KRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQIL 791
E +PL E V+ LN E P RP+ +++L
Sbjct: 223 TLEGNYSKPLKEFVEACLNKE--------------------PSFRPTAKELL 254
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 132/320 (41%), Gaps = 59/320 (18%)
Query: 119 LGSGGFGKVY----RAVLPSDG-TVVAVKCLAEKGERFEKT-FAAELVAVAHLRHRNLVR 172
LG G FG VY R ++ + T VAVK + E E+ F E + ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 173 LRGWCVHEDQLLLVYDYMPN---RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
L G L+V + M + +S R L EN P ++ ++ +A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
YL+ + + +HRD+ N M+ + ++GDFG+ R + +E Y
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI-YETDYY-------------- 186
Query: 290 ETTRIGGTIGYLP-----PESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQI 344
R GG G LP PES + G V T SD++SFG+V+ E+ S ++Q+
Sbjct: 187 ---RKGGK-GLLPVRWMAPESLKDG-VFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV 241
Query: 345 ILLDWIRRLSDEGKVLQAGDN---RLSDGSYKLCDMEXXXXXXXXXXXXNPHLRPSMKWV 401
+ + +G L DN R++D ++C NP +RP+ +
Sbjct: 242 L------KFVMDGGYLDQPDNCPERVTD-LMRMC------------WQFNPKMRPTFLEI 282
Query: 402 IEAVSGSYSGKLPALPSFQS 421
+ + P + F S
Sbjct: 283 VNLLKDDLHPSFPEVSFFHS 302
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 119/279 (42%), Gaps = 32/279 (11%)
Query: 526 FGTAYQGFL------DNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWC 579
FG Y+G + V VK + S R F NE + ++V+L G
Sbjct: 30 FGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVV 89
Query: 580 TEQGEMLVIYDYSA----TRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEE 635
++ LV+ + A L L + G + +A + YL+ +
Sbjct: 90 SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK 149
Query: 636 WNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSP 695
+ +HR++ + + D ++G F + + D+ +RK G VR +M+P
Sbjct: 150 ---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDY-YRKGGKGLLPVR----WMAP 201
Query: 696 EYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDL 755
E ++ G T+ +D++SFGVV+ E+ + + + +GL ++V +F +D
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSNEQVLKFVMD----GGYLDQ 253
Query: 756 SLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSIL 794
N +LMR+ C NP++RP+ +I+++L
Sbjct: 254 PDNCPERVTDLMRM------CWQFNPKMRPTFLEIVNLL 286
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 27/212 (12%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG+G FG V V A+K + E G E F E + +L H LV+L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDV-AIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
+ + ++ +YM N L L + +Q ++ + + A+ YL + Q
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQT------QQLLEMCKDVCEAMEYLESK---Q 140
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
+HRD+ N +++ Q ++ DFGL+R++ + +S+ +F +
Sbjct: 141 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-----EYTSSVGSKF----------PV 185
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ PPE S ++KSD+++FG+++ E+ S
Sbjct: 186 RWSPPEVLMY-SKFSSKSDIWAFGVLMWEIYS 216
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 81/172 (47%), Gaps = 15/172 (8%)
Query: 557 FSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWH 616
F E + + L H LVQL G CT+Q + +I +Y A L + L HR Q
Sbjct: 66 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-----FQTQ 120
Query: 617 HRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGH 676
+ K + A+ YL ++Q +HR++ + ++ ++ F L+ ++ D +
Sbjct: 121 QLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL--DDEY 175
Query: 677 RKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVD 727
+ VR + PE + + +S +D+++FGV++ E+ + G+M +
Sbjct: 176 TSSVGSKFPVR----WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 223
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 30/222 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G FG+V+ + T VA+K L + G + F E + LRH LV+L V
Sbjct: 192 LGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VV 248
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E+ + +V +YM SL L E L Q + +A+ + Y+
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFL-----KGETGKYLRLPQLVDMAAQIASGMAYVERM---N 300
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
+HRD++ +N+++ ++ DFGLAR +E +Y R + +F I
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDN-EYTARQGA----KF----------PI 345
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
+ PE+ G T KSDV+SFGI++ E+ + R + YP
Sbjct: 346 KWTAPEAALYGRF-TIKSDVWSFGILLTELTTKGR---VPYP 383
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 82/196 (41%), Gaps = 16/196 (8%)
Query: 526 FGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEM 585
FG + G + V +K L F E Q + +LRH LVQL +E+
Sbjct: 197 FGEVWMGTWNGTTRVAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIY 254
Query: 586 LVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNI 645
+V S +L L L+ ++ +AS + Y+ +HR++
Sbjct: 255 IVTEYMSKGSLLDFLKGETGK-----YLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 306
Query: 646 TSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATS 705
++ I + ++ ++ F LA + N++ R+ + + +PE G T
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQG------AKFPIKWTAPEAALYGRFTI 360
Query: 706 MADVYSFGVVVLEVVT 721
+DV+SFG+++ E+ T
Sbjct: 361 KSDVWSFGILLTELTT 376
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 29/220 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
F + E +G G FG+V++ + VVA+K + E+ E + E+ ++ +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
+ G + + +L ++ +Y+ S +L PL+ Q I+R + L YL
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLL--------EPGPLDETQIATILREILKGLDYL 135
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
H + + IHRD+K +NV+L +L DFG+A Q+ + + + F
Sbjct: 136 HSE---KKIHRDIKAANVLLSEHGEVKLADFGVAG--------QLTDTQIKRNXF----- 179
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
GT ++ PE K S +K+D++S GI +E+ G
Sbjct: 180 ---VGTPFWMAPEVI-KQSAYDSKADIWSLGITAIELARG 215
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 114/273 (41%), Gaps = 45/273 (16%)
Query: 515 FSESQRVAEMDFGTAYQGFLDN--HQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNL 572
F++ +++ + FG ++G +DN + V +K + + + E+ L++ +
Sbjct: 24 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 82
Query: 573 VQLCGWCTEQGEMLVIYDY----SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASA 628
+ G + ++ +I +Y SA +L L I++ +
Sbjct: 83 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-----------GPLDETQIATILREILKG 131
Query: 629 ILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRG 688
+ YLH +E+ IHR+I ++ + L +L F +A LT N V
Sbjct: 132 LDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ------IKRNXFVGT 182
Query: 689 IFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ--------MAVDFRLPEGLLVKRVH 740
F +M+PE I+ S AD++S G+ +E+ G+ M V F +P+
Sbjct: 183 PF-WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN----NPP 237
Query: 741 EFEAR-KRPLAELVDLSLNGEYNH----KELMR 768
E +PL E V+ LN E + KEL++
Sbjct: 238 TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK 270
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 117/262 (44%), Gaps = 35/262 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNL 170
F + E +G G +G VY+A G VVA+K L + E T E+ + L H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAA-PLNWEQRKKIIRGLAAALH 229
V+L E++L LV++++ S+D F L PL ++++GLA
Sbjct: 68 VKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA---- 120
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
+ H +++HRD+K N++++++ +L DFGLAR R + +
Sbjct: 121 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAF---------GVPVRTYXHEVV 168
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII--LL 347
T+ Y PE + D++S G + E+V+ RRA+ +P D I L
Sbjct: 169 -------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL---FPGDSEIDQLF 217
Query: 348 DWIRRLSDEGKVLQAGDNRLSD 369
R L +V+ G + D
Sbjct: 218 RIFRTLGTPDEVVWPGVTSMPD 239
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 39/216 (18%), Positives = 98/216 (45%), Gaps = 18/216 (8%)
Query: 509 ISATNNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGM-SKCPALRTRFSNELQNLAR 566
+ + NF + +++ E +G Y+ + V +K++ + ++ + + E+ L
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 567 LRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLA 626
L H N+V+L + ++ +++++ + + + I +++ + + +++ LA
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA 120
Query: 627 SAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSV 686
+ H + +V+HR++ + ++ + G+ LA+F G T + V
Sbjct: 121 ----FCH---SHRVLHRDLKPENLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 687 RGIFGYMSPEYIESGEATSMA-DVYSFGVVVLEVVT 721
Y +PE + + S A D++S G + E+VT
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 30/222 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G FG+V+ + T VA+K L + G + F E + LRH LV+L V
Sbjct: 192 LGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VV 248
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E+ + +V +YM SL L E L Q + +A+ + Y+
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFL-----KGETGKYLRLPQLVDMAAQIASGMAYVERM---N 300
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
+HRD++ +N+++ ++ DFGLAR +E +Y R + +F I
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDN-EYTARQGA----KF----------PI 345
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
+ PE+ G T KSDV+SFGI++ E+ + R + YP
Sbjct: 346 KWTAPEAALYGRF-TIKSDVWSFGILLTELTTKGR---VPYP 383
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 82/196 (41%), Gaps = 16/196 (8%)
Query: 526 FGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEM 585
FG + G + V +K L F E Q + +LRH LVQL +E+
Sbjct: 197 FGEVWMGTWNGTTRVAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIY 254
Query: 586 LVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNI 645
+V S +L L L+ ++ +AS + Y+ +HR++
Sbjct: 255 IVTEYMSKGSLLDFLKGETGK-----YLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 306
Query: 646 TSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATS 705
++ I + ++ ++ F LA + N++ R+ + + +PE G T
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQG------AKFPIKWTAPEAALYGRFTI 360
Query: 706 MADVYSFGVVVLEVVT 721
+DV+SFG+++ E+ T
Sbjct: 361 KSDVWSFGILLTELTT 376
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 27/212 (12%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG+G FG V V A+K + E G E F E + +L H LV+L G C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDV-AIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
+ + ++ +YM N L L + +Q ++ + + A+ YL + Q
Sbjct: 70 KQRPIFIITEYMANGCLLNYLREMRHRFQT------QQLLEMCKDVCEAMEYLESK---Q 120
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
+HRD+ N +++ Q ++ DFGL+R++ + +S+ +F +
Sbjct: 121 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-----EYTSSVGSKF----------PV 165
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ PPE S ++KSD+++FG+++ E+ S
Sbjct: 166 RWSPPEVLMY-SKFSSKSDIWAFGVLMWEIYS 196
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 15/169 (8%)
Query: 557 FSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWH 616
F E + + L H LVQL G CT+Q + +I +Y A L + L HR Q
Sbjct: 46 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-----FQTQ 100
Query: 617 HRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGH 676
+ K + A+ YL ++Q +HR++ + ++ ++ F L+ ++ D +
Sbjct: 101 QLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL--DDEY 155
Query: 677 RKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQM 724
+ VR + PE + + +S +D+++FGV++ E+ + G+M
Sbjct: 156 TSSVGSKFPVR----WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM 200
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 30/222 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G FG+V+ + T VA+K L + G + F E + LRH LV+L V
Sbjct: 19 LGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VV 75
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E+ + +V +YM SL L E L Q + +A+ + Y+
Sbjct: 76 SEEPIYIVTEYMSKGSLLDFL-----KGETGKYLRLPQLVDMAAQIASGMAYVERM---N 127
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
+HRD++ +N+++ ++ DFGLAR +E +Y R + +F I
Sbjct: 128 YVHRDLRAANILVGENLVCKVADFGLARLIEDN-EYTARQGA----KF----------PI 172
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
+ PE+ G T KSDV+SFGI++ E+ + R + YP
Sbjct: 173 KWTAPEAALYGRF-TIKSDVWSFGILLTELTTKGR---VPYP 210
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 82/196 (41%), Gaps = 16/196 (8%)
Query: 526 FGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEM 585
FG + G + V +K L F E Q + +LRH LVQL +E+
Sbjct: 24 FGEVWMGTWNGTTRVAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIY 81
Query: 586 LVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNI 645
+V S +L L L+ ++ +AS + Y+ +HR++
Sbjct: 82 IVTEYMSKGSLLDFLKGETG-----KYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 133
Query: 646 TSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATS 705
++ I + ++ ++ F LA + N++ R+ + + +PE G T
Sbjct: 134 RAANILVGENLVCKVADFGLARLIEDNEYTARQGA------KFPIKWTAPEAALYGRFTI 187
Query: 706 MADVYSFGVVVLEVVT 721
+DV+SFG+++ E+ T
Sbjct: 188 KSDVWSFGILLTELTT 203
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 130/321 (40%), Gaps = 59/321 (18%)
Query: 119 LGSGGFGKVY----RAVLPSDG-TVVAVKCLAEKGERFEKT-FAAELVAVAHLRHRNLVR 172
LG G FG VY R ++ + T VAVK + E E+ F E + ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 173 LRGWCVHEDQLLLVYDYMPN---RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
L G L+V + M + +S R L EN P ++ ++ +A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
YL+ + + +HRD+ N M+ + ++GDFG+ R +
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE------------------T 183
Query: 290 ETTRIGGTIGYLP-----PESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQI 344
+ R GG G LP PES + G V T SD++SFG+V+ E+ S ++Q+
Sbjct: 184 DXXRKGGK-GLLPVRWMAPESLKDG-VFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV 241
Query: 345 ILLDWIRRLSDEGKVLQAGDN---RLSDGSYKLCDMEXXXXXXXXXXXXNPHLRPSMKWV 401
+ + +G L DN R++D ++C NP +RP+ +
Sbjct: 242 L------KFVMDGGYLDQPDNCPERVTD-LMRMC------------WQFNPKMRPTFLEI 282
Query: 402 IEAVSGSYSGKLPALPSFQSH 422
+ + P + F S
Sbjct: 283 VNLLKDDLHPSFPEVSFFHSE 303
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 117/279 (41%), Gaps = 32/279 (11%)
Query: 526 FGTAYQGFL------DNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWC 579
FG Y+G + V VK + S R F NE + ++V+L G
Sbjct: 30 FGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVV 89
Query: 580 TEQGEMLVIYDYSA----TRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEE 635
++ LV+ + A L L + G + +A + YL+ +
Sbjct: 90 SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK 149
Query: 636 WNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSP 695
+ +HR++ + + D ++G F + + D RK G VR +M+P
Sbjct: 150 ---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDX-XRKGGKGLLPVR----WMAP 201
Query: 696 EYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDL 755
E ++ G T+ +D++SFGVV+ E+ + + + +GL ++V +F +D
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSNEQVLKFVMD----GGYLDQ 253
Query: 756 SLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSIL 794
N +LMR+ C NP++RP+ +I+++L
Sbjct: 254 PDNCPERVTDLMRM------CWQFNPKMRPTFLEIVNLL 286
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 110/230 (47%), Gaps = 36/230 (15%)
Query: 119 LGSGGFGKVYRAVL-------PSDGTVVAVKCLAEKGERFEKTFAAELVAVAHL-----R 166
LG G FG+V A P+ T VAVK L K + EK + +L++ + +
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLS-DLISEMEMMKMIGK 81
Query: 167 HRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVL-FRRPENLEAA-APLNWEQRKKIIRGL 224
H+N++ L G C + L ++ +Y +L L RRP LE + P + + + + L
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 225 AAALHYLHEQLE----TQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSS 280
+ + + +E + IHRD+ NV++ ++ DFGLAR + H + Y +T++
Sbjct: 142 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-HHIDYYKKTTN 200
Query: 281 ARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
R + ++ PE+ + T +SDV+SFG+++ E+ +
Sbjct: 201 GRL-------------PVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFT 236
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 109/238 (45%), Gaps = 32/238 (13%)
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLL-------FHNNHRIGHSILQWHHRYN 620
+H+N++ L G CT+ G + VI +Y++ L L ++ H+ + +
Sbjct: 81 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 621 IIK---SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHR 677
++ +A + YL +++ IHR++ + + + D ++ F LA + D+ ++
Sbjct: 141 LVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY-YK 196
Query: 678 KATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVK 737
K T+G V+ +M+PE + T +DV+SFGV++ E+ T + +P L K
Sbjct: 197 KTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 252
Query: 738 RVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
+ E +P +L + +MR C + P RP+ +Q++ LD
Sbjct: 253 LLKEGHRMDKPSNCTNELYM--------MMR------DCWHAVPSQRPTFKQLVEDLD 296
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 117/262 (44%), Gaps = 35/262 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNL 170
F + E +G G +G VY+A G VVA+K L + E T E+ + L H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAA-PLNWEQRKKIIRGLAAALH 229
V+L E++L LV++++ S+D F L PL ++++GLA
Sbjct: 66 VKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA---- 118
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
+ H +++HRD+K N++++++ +L DFGLAR R + +
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAF---------GVPVRTYXHEVV 166
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII--LL 347
T+ Y PE + D++S G + E+V+ RRA+ +P D I L
Sbjct: 167 -------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL---FPGDSEIDQLF 215
Query: 348 DWIRRLSDEGKVLQAGDNRLSD 369
R L +V+ G + D
Sbjct: 216 RIFRTLGTPDEVVWPGVTSMPD 237
Score = 32.7 bits (73), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 39/214 (18%), Positives = 97/214 (45%), Gaps = 18/214 (8%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGM-SKCPALRTRFSNELQNLARLR 568
+ NF + +++ E +G Y+ + V +K++ + ++ + + E+ L L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 569 HRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASA 628
H N+V+L + ++ +++++ + + + I +++ + + +++ LA
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA-- 118
Query: 629 ILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRG 688
+ H + +V+HR++ + ++ + G+ LA+F G T + V
Sbjct: 119 --FCH---SHRVLHRDLKPENLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVV-- 166
Query: 689 IFGYMSPEYIESGEATSMA-DVYSFGVVVLEVVT 721
Y +PE + + S A D++S G + E+VT
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 109/227 (48%), Gaps = 30/227 (13%)
Query: 119 LGSGGFGKVYRAVL-------PSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHL-RHRN 169
LG G FG+V A P+ T VAVK L ++ E+ +E+ + + +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVL-FRRPENLEAA-APLNWEQRKKIIRGLAAA 227
++ L G C + L ++ +Y +L L RRP LE + P + + + + L +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 228 LHYLHEQLE----TQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARN 283
+ + +E + IHRD+ NV++ ++ DFGLAR + H + Y +T++ R
Sbjct: 197 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-HHIDYYKKTTNGRL 255
Query: 284 HQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ ++ PE+ + T +SDV+SFG+++ E+ +
Sbjct: 256 -------------PVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFT 288
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 109/238 (45%), Gaps = 32/238 (13%)
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLL-------FHNNHRIGHSILQWHHRYN 620
+H+N++ L G CT+ G + VI +Y++ L L ++ H+ + +
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 621 IIK---SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHR 677
++ +A + YL +++ IHR++ + + + D ++ F LA + D+ ++
Sbjct: 193 LVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY-YK 248
Query: 678 KATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVK 737
K T+G V+ +M+PE + T +DV+SFGV++ E+ T + +P L K
Sbjct: 249 KTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 304
Query: 738 RVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
+ E +P +L + +MR C + P RP+ +Q++ LD
Sbjct: 305 LLKEGHRMDKPSNCTNELYM--------MMR------DCWHAVPSQRPTFKQLVEDLD 348
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 30/222 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G FG+V+ + T VA+K L + G + F E + LRH LV+L V
Sbjct: 16 LGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VV 72
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E+ + +V +YM SL L E L Q + +A+ + Y+
Sbjct: 73 SEEPIXIVTEYMSKGSLLDFL-----KGETGKYLRLPQLVDMAAQIASGMAYVERM---N 124
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
+HRD++ +N+++ ++ DFGLAR +E ++ + +F I
Sbjct: 125 YVHRDLRAANILVGENLVCKVADFGLARLIEDN-----EXTARQGAKF----------PI 169
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
+ PE+ G T KSDV+SFGI++ E+ + R + YP
Sbjct: 170 KWTAPEAALYGRF-TIKSDVWSFGILLTELTTKGR---VPYP 207
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 81/196 (41%), Gaps = 16/196 (8%)
Query: 526 FGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEM 585
FG + G + V +K L F E Q + +LRH LVQL +E+
Sbjct: 21 FGEVWMGTWNGTTRVAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIX 78
Query: 586 LVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNI 645
+V S +L L L+ ++ +AS + Y+ +HR++
Sbjct: 79 IVTEYMSKGSLLDFLKGETGK-----YLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 130
Query: 646 TSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATS 705
++ I + ++ ++ F LA + N+ R+ + + +PE G T
Sbjct: 131 RAANILVGENLVCKVADFGLARLIEDNEXTARQG------AKFPIKWTAPEAALYGRFTI 184
Query: 706 MADVYSFGVVVLEVVT 721
+DV+SFG+++ E+ T
Sbjct: 185 KSDVWSFGILLTELTT 200
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 106/231 (45%), Gaps = 30/231 (12%)
Query: 116 DEVLGSGGFGKVYRA-VLPSDGTVV--AVKCLAEKGERFEKT-FAAELVAVAHLRHRNLV 171
+EV+G G FG VY +L +DG + AVK L + E + F E + + H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 172 RLRGWCVH-EDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
L G C+ E L+V YM + L + N + + + +A + Y
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKY 147
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
L + + +HRD+ N MLD ++ ++ DFGLAR + Y S N
Sbjct: 148 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDM-----YDKEXXSVHN------- 192
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPD 341
T + ++ ES Q T KSDV+SFG+++ E+++ R A YPD
Sbjct: 193 KTGAKLPVKWMALESLQTQKF-TTKSDVWSFGVLLWELMT-RGAP--PYPD 239
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 90/208 (43%), Gaps = 30/208 (14%)
Query: 526 FGTAYQG-FLDNHQ---YVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCT- 580
FG Y G LDN + VK L ++F E + H N++ L G C
Sbjct: 42 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 101
Query: 581 EQGEMLVIYDYSATRILSHLLFHNNHR------IGHSILQWHHRYNIIKSLASAILYLHE 634
+G LV+ Y L + + + H IG + +A + YL
Sbjct: 102 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-----------QVAKGMKYLA- 149
Query: 635 EWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRS-VRGIFGYM 693
+++ +HR++ + LD ++ F LA R+ + + N++ + +M
Sbjct: 150 --SKKFVHRDLAARNCMLDEKFTVKVADFGLA----RDMYDKEXXSVHNKTGAKLPVKWM 203
Query: 694 SPEYIESGEATSMADVYSFGVVVLEVVT 721
+ E +++ + T+ +DV+SFGV++ E++T
Sbjct: 204 ALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 30/231 (12%)
Query: 116 DEVLGSGGFGKVYRA-VLPSDGTVV--AVKCLAEKGERFEKT-FAAELVAVAHLRHRNLV 171
+EV+G G FG VY +L +DG + AVK L + E + F E + + H N++
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 172 RLRGWCVH-EDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
L G C+ E L+V YM + L + N + + + +A + Y
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKY 166
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
L + + +HRD+ N MLD ++ ++ DFGLAR + + Y + +
Sbjct: 167 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL------ 217
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPD 341
+ ++ ES Q T KSDV+SFG+++ E+++ R A YPD
Sbjct: 218 ------PVKWMALESLQTQKF-TTKSDVWSFGVLLWELMT-RGAP--PYPD 258
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 88/208 (42%), Gaps = 30/208 (14%)
Query: 526 FGTAYQG-FLDNHQ---YVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCT- 580
FG Y G LDN + VK L ++F E + H N++ L G C
Sbjct: 61 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 120
Query: 581 EQGEMLVIYDYSATRILSHLLFHNNHR------IGHSILQWHHRYNIIKSLASAILYLHE 634
+G LV+ Y L + + + H IG + +A + YL
Sbjct: 121 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-----------QVAKGMKYLA- 168
Query: 635 EWNEQVIHRNITSSAITLDPDMNPRLGSFALA-EFLTRNDHGHRKATSGNRSVRGIFGYM 693
+++ +HR++ + LD ++ F LA + + + T V+ +M
Sbjct: 169 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK----WM 222
Query: 694 SPEYIESGEATSMADVYSFGVVVLEVVT 721
+ E +++ + T+ +DV+SFGV++ E++T
Sbjct: 223 ALESLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 110/230 (47%), Gaps = 36/230 (15%)
Query: 119 LGSGGFGKVYRAVL-------PSDGTVVAVKCLAEKGERFEKTFAAELVAVAHL-----R 166
LG G FG+V A P+ T VAVK L K + EK + +L++ + +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLS-DLISEMEMMKMIGK 92
Query: 167 HRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVL-FRRPENLEAA-APLNWEQRKKIIRGL 224
H+N++ L G C + L ++ +Y +L L RRP LE + P + + + + L
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 225 AAALHYLHEQLE----TQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSS 280
+ + + +E + IHRD+ NV++ ++ DFGLAR + H + Y +T++
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-HHIDYYKKTTN 211
Query: 281 ARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
R + ++ PE+ + T +SDV+SFG+++ E+ +
Sbjct: 212 GRL-------------PVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFT 247
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 109/238 (45%), Gaps = 32/238 (13%)
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLL-------FHNNHRIGHSILQWHHRYN 620
+H+N++ L G CT+ G + VI +Y++ L L ++ H+ + +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 621 IIK---SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHR 677
++ +A + YL +++ IHR++ + + + D ++ F LA + D+ ++
Sbjct: 152 LVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY-YK 207
Query: 678 KATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVK 737
K T+G V+ +M+PE + T +DV+SFGV++ E+ T + +P L K
Sbjct: 208 KTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 263
Query: 738 RVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
+ E +P +L + +MR C + P RP+ +Q++ LD
Sbjct: 264 LLKEGHRMDKPSNCTNELYM--------MMR------DCWHAVPSQRPTFKQLVEDLD 307
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 105/221 (47%), Gaps = 31/221 (14%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
F + E +G G FG+V++ + VVA+K + E+ E + E+ ++ +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 172 RLRGWCVHEDQLLLVYDYMPNRS-LDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
+ G + +L ++ +Y+ S LD L R A P + Q +++ + L Y
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALD--LLR-------AGPFDEFQIATMLKEILKGLDY 135
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
LH + + IHRD+K +NV+L Q + +L DFG+A Q+ + + + F
Sbjct: 136 LHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAG--------QLTDTQIKRNTFV--- 181
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
GT ++ PE Q+ S +K+D++S GI +E+ G
Sbjct: 182 -----GTPFWMAPEVIQQ-SAYDSKADIWSLGITAIELAKG 216
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 132/317 (41%), Gaps = 61/317 (19%)
Query: 515 FSESQRVAEMDFGTAYQGFLDN--HQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNL 572
F++ +R+ + FG ++G +DN Q V +K + + + E+ L++ +
Sbjct: 25 FTKLERIGKGSFGEVFKG-IDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYV 83
Query: 573 VQLCGWCTEQGEMLVIYDY----SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASA 628
+ G + ++ +I +Y SA +L F + +I ++K +
Sbjct: 84 TKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPF-DEFQIA----------TMLKEILKG 132
Query: 629 ILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRG 688
+ YLH +E+ IHR+I ++ + L + +L F +A LT D ++ T G
Sbjct: 133 LDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLT--DTQIKRNT-----FVG 182
Query: 689 IFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ--------MAVDFRLPEGLLVKRVH 740
+M+PE I+ S AD++S G+ +E+ G+ M V F +P+ V
Sbjct: 183 TPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVG 242
Query: 741 EFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQIL--SILDGND 798
+F + E +D AC +P RP+ +++L + N
Sbjct: 243 DFT---KSFKEFID--------------------ACLNKDPSFRPTAKELLKHKFIVKNS 279
Query: 799 KRFMEDGQMTENLEEWK 815
K+ ++ + + WK
Sbjct: 280 KKTSYLTELIDRFKRWK 296
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 107/224 (47%), Gaps = 44/224 (19%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG+G FG+V+ A + T VAVK + + G + F AE + L+H LV+L V
Sbjct: 190 LGAGQFGEVWMATY-NKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHA-VV 246
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
++ + ++ ++M SL L + E + P + +I G+A ++ ++
Sbjct: 247 TKEPIYIITEFMAKGSLLDFL-KSDEGSKQPLPKLIDFSAQIAEGMA----FIEQR---N 298
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGG-- 296
IHRD++ +N+++ + ++ DFGLAR +G
Sbjct: 299 YIHRDLRAANILVSASLVCKIADFGLAR---------------------------VGAKF 331
Query: 297 TIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
I + PE+ GS T KSDV+SFGI+++E+V+ R + YP
Sbjct: 332 PIKWTAPEAINFGSF-TIKSDVWSFGILLMEIVTYGR---IPYP 371
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 110/279 (39%), Gaps = 44/279 (15%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGW 578
+++ FG + + H V VK + F E + L+H LV+L
Sbjct: 188 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV--EAFLAEANVMKTLQHDKLVKLHAV 245
Query: 579 CTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNE 638
T++ + +I ++ A L L + S + +A + ++ +
Sbjct: 246 VTKE-PIYIITEFMAKGSLLDFLKSDEG----SKQPLPKLIDFSAQIAEGMAFIEQR--- 297
Query: 639 QVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYI 698
IHR++ ++ I + + ++ F LA + + +PE I
Sbjct: 298 NYIHRDLRAANILVSASLVCKIADFGLARV----------------GAKFPIKWTAPEAI 341
Query: 699 ESGEATSMADVYSFGVVVLEVVT-GQMAVD-FRLPEGLLVKRVHEFEARKRPLAELVDLS 756
G T +DV+SFG++++E+VT G++ PE +++ + RP
Sbjct: 342 NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE--VIRALERGYRMPRP-------- 391
Query: 757 LNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
E +EL ++ + C + PE RP+ I S+LD
Sbjct: 392 ---ENCPEELYNIM---MRCWKNRPEERPTFEYIQSVLD 424
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 119/265 (44%), Gaps = 33/265 (12%)
Query: 109 GSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLR 166
G F + E +G G +G VY+A G VVA+K L + E T E+ + L
Sbjct: 1 GMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 167 HRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAA 226
H N+V+L E++L LV++++ ++ L + + + A + K + L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQ 114
Query: 227 ALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQF 286
L + H +++HRD+K N++++++ +L DFGLAR +RT + H+
Sbjct: 115 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPVRTYT---HEV 164
Query: 287 HLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII- 345
T+ Y PE + D++S G + E+V+ RRA+ +P D I
Sbjct: 165 ---------VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL---FPGDSEID 211
Query: 346 -LLDWIRRLSDEGKVLQAGDNRLSD 369
L R L +V+ G + D
Sbjct: 212 QLFRIFRTLGTPDEVVWPGVTSMPD 236
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 514 NFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGM-SKCPALRTRFSNELQNLARLRHRN 571
NF + +++ E +G Y+ + V +K++ + ++ + + E+ L L H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 572 LVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILY 631
+V+L + ++ +++++ + + I +++ + + +++ LA +
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA----F 118
Query: 632 LHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFG 691
H + +V+HR++ + ++ + G+ LA+F G T + V
Sbjct: 119 CH---SHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYTHEVV--TLW 168
Query: 692 YMSPEYIESGEATSMA-DVYSFGVVVLEVVT 721
Y +PE + + S A D++S G + E+VT
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 97/231 (41%), Gaps = 35/231 (15%)
Query: 112 GFDEDEVL---GSGGFGKVYRAVLPSDGTVVAVKCLAEKG--ERFE-KTFAAELVAVAHL 165
FD E+L G G FGKV + A+K + ++ ER E + EL + L
Sbjct: 13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL 72
Query: 166 RHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLA 225
H LV L E+ + +V D + L +L+ E K I L
Sbjct: 73 EHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRY-------HLQQNVHFKEETVKLFICELV 125
Query: 226 AALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQ 285
AL YL Q +IIHRD+K N++LD + + DF +A L E Q
Sbjct: 126 MALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ------------ 170
Query: 286 FHLAETTRIGGTIGYLPPESF--QKGSVATAKSDVFSFGIVVLEVVSGRRA 334
T + GT Y+ PE F +KG+ + D +S G+ E++ GRR
Sbjct: 171 -----ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 110/230 (47%), Gaps = 36/230 (15%)
Query: 119 LGSGGFGKVYRAVL-------PSDGTVVAVKCLAEKGERFEKTFAAELVAVAHL-----R 166
LG G FG+V A P+ T VAVK L K + EK + +L++ + +
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLS-DLISEMEMMKMIGK 84
Query: 167 HRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVL-FRRPENLEAA-APLNWEQRKKIIRGL 224
H+N++ L G C + L ++ +Y +L L RRP LE + P + + + + L
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 225 AAALHYLHEQLE----TQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSS 280
+ + + +E + IHRD+ NV++ ++ DFGLAR + H + Y +T++
Sbjct: 145 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-HHIDYYKKTTN 203
Query: 281 ARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
R + ++ PE+ + T +SDV+SFG+++ E+ +
Sbjct: 204 GRL-------------PVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFT 239
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 109/238 (45%), Gaps = 32/238 (13%)
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLL-------FHNNHRIGHSILQWHHRYN 620
+H+N++ L G CT+ G + VI +Y++ L L ++ H+ + +
Sbjct: 84 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 621 IIK---SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHR 677
++ +A + YL +++ IHR++ + + + D ++ F LA + D+ ++
Sbjct: 144 LVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY-YK 199
Query: 678 KATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVK 737
K T+G V+ +M+PE + T +DV+SFGV++ E+ T + +P L K
Sbjct: 200 KTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 255
Query: 738 RVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
+ E +P +L + +MR C + P RP+ +Q++ LD
Sbjct: 256 LLKEGHRMDKPSNCTNELYM--------MMR------DCWHAVPSQRPTFKQLVEDLD 299
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 30/222 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G FG+V+ + T VA+K L + G + F E + LRH LV+L V
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VV 82
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E+ + +V +YM SL L E L Q + +A+ + Y+
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFL-----KGEMGKYLRLPQLVDMAAQIASGMAYVERM---N 134
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
+HRD++ +N+++ ++ DFGLAR +E +Y R + +F I
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDN-EYTARQGA----KF----------PI 179
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
+ PE+ G T KSDV+SFGI++ E+ + R + YP
Sbjct: 180 KWTAPEAALYGRF-TIKSDVWSFGILLTELTTKGR---VPYP 217
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 85/196 (43%), Gaps = 16/196 (8%)
Query: 526 FGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEM 585
FG + G + V +K L F E Q + +LRH LVQL +E+
Sbjct: 31 FGEVWMGTWNGTTRVAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIY 88
Query: 586 LVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNI 645
+VI S +L L +G L+ ++ +AS + Y+ +HR++
Sbjct: 89 IVIEYMSKGSLLDFL----KGEMG-KYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 646 TSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATS 705
++ I + ++ ++ F LA + N++ R+ + + +PE G T
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGA------KFPIKWTAPEAALYGRFTI 194
Query: 706 MADVYSFGVVVLEVVT 721
+DV+SFG+++ E+ T
Sbjct: 195 KSDVWSFGILLTELTT 210
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 117/262 (44%), Gaps = 35/262 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNL 170
F + E +G G +G VY+A G VVA+K L + E T E+ + L H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAA-PLNWEQRKKIIRGLAAALH 229
V+L E++L LV++++ S+D F L PL ++++GLA
Sbjct: 68 VKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA---- 120
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
+ H +++HRD+K N++++++ +L DFGLAR R + +
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF---------GVPVRTYXHEVV 168
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII--LL 347
T+ Y PE + D++S G + E+V+ RRA+ +P D I L
Sbjct: 169 -------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL---FPGDSEIDQLF 217
Query: 348 DWIRRLSDEGKVLQAGDNRLSD 369
R L +V+ G + D
Sbjct: 218 RIFRTLGTPDEVVWPGVTSMPD 239
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 39/216 (18%), Positives = 98/216 (45%), Gaps = 18/216 (8%)
Query: 509 ISATNNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGM-SKCPALRTRFSNELQNLAR 566
+ + NF + +++ E +G Y+ + V +K++ + ++ + + E+ L
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 567 LRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLA 626
L H N+V+L + ++ +++++ + + + I +++ + + +++ LA
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIK-SYLFQLLQGLA 120
Query: 627 SAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSV 686
+ H + +V+HR++ + ++ + G+ LA+F G T + V
Sbjct: 121 ----FCH---SHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 687 RGIFGYMSPEYIESGEATSMA-DVYSFGVVVLEVVT 721
Y +PE + + S A D++S G + E+VT
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 29/214 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G +G+VY V VAVK L E E+ F E + ++H NLV+L G C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E ++ ++M +L L R E +A + +I ++A+ YL ++
Sbjct: 287 REPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQI----SSAMEYLEKK---N 338
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
IHR++ N ++ + ++ DFGL+R + + + H I T
Sbjct: 339 FIHRNLAARNCLVGENHLVKVADFGLSRLM-----------TGDTYTAHAGAKFPIKWTA 387
Query: 299 GYLPPES--FQKGSVATAKSDVFSFGIVVLEVVS 330
PES + K S+ KSDV++FG+++ E+ +
Sbjct: 388 ----PESLAYNKFSI---KSDVWAFGVLLWEIAT 414
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 118/273 (43%), Gaps = 44/273 (16%)
Query: 526 FGTAYQGFLDNHQY-VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGE 584
+G Y+G + V VK L F E + ++H NLVQL G CT +
Sbjct: 233 YGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVCTREPP 290
Query: 585 MLVIYDY-SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHR 643
+I ++ + +L +L N + +L + + ++SA+ YL + + IHR
Sbjct: 291 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSAMEYLEK---KNFIHR 342
Query: 644 NITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEA 703
N+ + + + ++ F L+ +T + + + + + + +PE + +
Sbjct: 343 NLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAKFPIKWTAPESLAYNKF 396
Query: 704 TSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEAR----KRP--LAELVDLSL 757
+ +DV++FGV++ E+ T M+ P G+ + +V+E + +RP E V
Sbjct: 397 SIKSDVWAFGVLLWEIATYGMS---PYP-GIDLSQVYELLEKDYRMERPEGCPEKV---- 448
Query: 758 NGEYNHKELMRLIKLGIACTLSNPELRPSMRQI 790
ELMR AC NP RPS +I
Sbjct: 449 ------YELMR------ACWQWNPSDRPSFAEI 469
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 121/281 (43%), Gaps = 28/281 (9%)
Query: 540 VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY----SATR 595
V +KR+ + KC E+Q +++ H N+V + E+ ++ S
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 102
Query: 596 ILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPD 655
I+ H++ H+ G +L I++ + + YLH+ N Q IHR++ + I L D
Sbjct: 103 IIKHIVAKGEHKSG--VLDESTIATILREVLEGLEYLHK--NGQ-IHRDVKAGNILLGED 157
Query: 656 MNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSM-ADVYSFGV 714
+ ++ F ++ FL R ++ G +M+PE +E AD++SFG+
Sbjct: 158 GSVQIADFGVSAFLATGGDITRNKV--RKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGI 215
Query: 715 VVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAE--LVDLSLNGEYNHKELMRLIKL 772
+E+ TG P +L+ + P E + D + +Y K ++I L
Sbjct: 216 TAIELATGAAPYHKYPPMKVLMLTLQ----NDPPSLETGVQDKEMLKKYG-KSFRKMISL 270
Query: 773 GIACTLSNPELRPSMRQILSILDGNDKRFMEDGQMTENLEE 813
C +PE RP+ ++L +F + + E L+E
Sbjct: 271 ---CLQKDPEKRPTAAELLR------HKFFQKAKNKEFLQE 302
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 111/242 (45%), Gaps = 17/242 (7%)
Query: 108 IGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLR 166
I + ++ EV+GSG V A VA+K + EK + E+ A++
Sbjct: 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCH 71
Query: 167 HRNLVRLRGWCVHEDQLLLVYDYMPNRS-LDRVLFRRPENLEAAAPLNWEQRKKIIRGLA 225
H N+V V +D+L LV + S LD + + + L+ I+R +
Sbjct: 72 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 226 AALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQ 285
L YLH+ + IHRDVK N++L + ++ DFG++ +L ++ +
Sbjct: 132 EGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFL----------ATGGDIT 178
Query: 286 FHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII 345
+ T + GT ++ PE ++ K+D++SFGI +E+ +G A YP +++
Sbjct: 179 RNKVRKTFV-GTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG-AAPYHKYPPMKVL 236
Query: 346 LL 347
+L
Sbjct: 237 ML 238
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 30/222 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G FG+V+ + T VA+K L + G + F E + LRH LV+L V
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VV 82
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E+ + +V +YM SL L E L Q + +A+ + Y+
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFL-----KGEMGKYLRLPQLVDMAAQIASGMAYVERM---N 134
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
+HRD++ +N+++ ++ DFGLAR +E +Y R + +F I
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDN-EYTARQGA----KF----------PI 179
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
+ PE+ G T KSDV+SFGI++ E+ + R + YP
Sbjct: 180 KWTAPEAALYGRF-TIKSDVWSFGILLTELTTKGR---VPYP 217
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 16/196 (8%)
Query: 526 FGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEM 585
FG + G + V +K L F E Q + +LRH LVQL +E+
Sbjct: 31 FGEVWMGTWNGTTRVAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIY 88
Query: 586 LVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNI 645
+V S +L L +G L+ ++ +AS + Y+ +HR++
Sbjct: 89 IVTEYMSKGSLLDFL----KGEMG-KYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 646 TSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATS 705
++ I + ++ ++ F LA + N++ R+ + + +PE G T
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGA------KFPIKWTAPEAALYGRFTI 194
Query: 706 MADVYSFGVVVLEVVT 721
+DV+SFG+++ E+ T
Sbjct: 195 KSDVWSFGILLTELTT 210
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 30/222 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G FG+V+ + T VA+K L + G + F E + LRH LV+L V
Sbjct: 275 LGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VV 331
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E+ + +V +YM SL L E L Q + +A+ + Y+
Sbjct: 332 SEEPIYIVTEYMSKGSLLDFL-----KGETGKYLRLPQLVDMAAQIASGMAYVERM---N 383
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
+HRD++ +N+++ ++ DFGLAR +E +Y R + +F I
Sbjct: 384 YVHRDLRAANILVGENLVCKVADFGLARLIEDN-EYTARQGA----KF----------PI 428
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
+ PE+ G T KSDV+SFGI++ E+ + R + YP
Sbjct: 429 KWTAPEAALYGRF-TIKSDVWSFGILLTELTTKGR---VPYP 466
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 84/196 (42%), Gaps = 16/196 (8%)
Query: 526 FGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEM 585
FG + G + V +K L F E Q + +LRH LVQL +E+
Sbjct: 280 FGEVWMGTWNGTTRVAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIY 337
Query: 586 LVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNI 645
+V S +L L L+ ++ +AS + Y+ E N +HR++
Sbjct: 338 IVTEYMSKGSLLDFLKGETGK-----YLRLPQLVDMAAQIASGMAYV-ERMN--YVHRDL 389
Query: 646 TSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATS 705
++ I + ++ ++ F LA + N++ R+ + + +PE G T
Sbjct: 390 RAANILVGENLVCKVADFGLARLIEDNEYTARQG------AKFPIKWTAPEAALYGRFTI 443
Query: 706 MADVYSFGVVVLEVVT 721
+DV+SFG+++ E+ T
Sbjct: 444 KSDVWSFGILLTELTT 459
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 30/222 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G FG+V+ + T VA+K L + G + F E + LRH LV+L V
Sbjct: 15 LGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VV 71
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E+ + +V +YM SL L E L Q + +A+ + Y+
Sbjct: 72 SEEPIYIVTEYMSKGSLLDFL-----KGEMGKYLRLPQLVDMAAQIASGMAYVERM---N 123
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
+HRD++ +N+++ ++ DFGLAR +E +Y R + +F I
Sbjct: 124 YVHRDLRAANILVGENLVCKVADFGLARLIEDN-EYTARQGA----KF----------PI 168
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
+ PE+ G T KSDV+SFGI++ E+ + R + YP
Sbjct: 169 KWTAPEAALYGRF-TIKSDVWSFGILLTELTTKGR---VPYP 206
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 16/196 (8%)
Query: 526 FGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEM 585
FG + G + V +K L F E Q + +LRH LVQL +E+
Sbjct: 20 FGEVWMGTWNGTTRVAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIY 77
Query: 586 LVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNI 645
+V S +L L +G L+ ++ +AS + Y+ +HR++
Sbjct: 78 IVTEYMSKGSLLDFL----KGEMG-KYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 129
Query: 646 TSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATS 705
++ I + ++ ++ F LA + N++ R+ + + +PE G T
Sbjct: 130 RAANILVGENLVCKVADFGLARLIEDNEYTARQGA------KFPIKWTAPEAALYGRFTI 183
Query: 706 MADVYSFGVVVLEVVT 721
+DV+SFG+++ E+ T
Sbjct: 184 KSDVWSFGILLTELTT 199
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 108/227 (47%), Gaps = 30/227 (13%)
Query: 119 LGSGGFGKVYRAVL-------PSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHL-RHRN 169
LG G FG+V A P+ T VAVK L ++ E+ +E+ + + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVL-FRRPENLEAA-APLNWEQRKKIIRGLAAA 227
++ L G C + L ++ +Y +L L RRP LE P + + + + L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 228 LHYLHEQLE----TQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARN 283
+ + +E + IHRD+ NV++ ++ DFGLAR + H + Y +T++ R
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-HHIDYYKKTTNGRL 214
Query: 284 HQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ ++ PE+ + T +SDV+SFG+++ E+ +
Sbjct: 215 -------------PVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFT 247
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 105/238 (44%), Gaps = 32/238 (13%)
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLL----------FHNNHRIGHSILQWHH 617
+H+N++ L G CT+ G + VI +Y++ L L +N L
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 618 RYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHR 677
+ +A + YL +++ IHR++ + + + D ++ F LA + D+ ++
Sbjct: 152 LVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY-YK 207
Query: 678 KATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVK 737
K T+G V+ +M+PE + T +DV+SFGV++ E+ T + +P L K
Sbjct: 208 KTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 263
Query: 738 RVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
+ E +P +L + +MR C + P RP+ +Q++ LD
Sbjct: 264 LLKEGHRMDKPSNCTNELYM--------MMR------DCWHAVPSQRPTFKQLVEDLD 307
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 110/230 (47%), Gaps = 36/230 (15%)
Query: 119 LGSGGFGKVYRAVL-------PSDGTVVAVKCLAEKGERFEKTFAAELVAVAHL-----R 166
LG G FG+V A P+ T VAVK L K + EK + +L++ + +
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLS-DLISEMEMMKMIGK 85
Query: 167 HRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVL-FRRPENLEAA-APLNWEQRKKIIRGL 224
H+N++ L G C + L ++ +Y +L L RRP LE + P + + + + L
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 225 AAALHYLHEQLE----TQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSS 280
+ + + +E + IHRD+ NV++ ++ DFGLAR + H + Y +T++
Sbjct: 146 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-HHIDYYKKTTN 204
Query: 281 ARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
R + ++ PE+ + T +SDV+SFG+++ E+ +
Sbjct: 205 GRL-------------PVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFT 240
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 109/238 (45%), Gaps = 32/238 (13%)
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLL-------FHNNHRIGHSILQWHHRYN 620
+H+N++ L G CT+ G + VI +Y++ L L ++ H+ + +
Sbjct: 85 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 621 IIK---SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHR 677
++ +A + YL +++ IHR++ + + + D ++ F LA + D+ ++
Sbjct: 145 LVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY-YK 200
Query: 678 KATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVK 737
K T+G V+ +M+PE + T +DV+SFGV++ E+ T + +P L K
Sbjct: 201 KTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 256
Query: 738 RVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
+ E +P +L + +MR C + P RP+ +Q++ LD
Sbjct: 257 LLKEGHRMDKPSNCTNELYM--------MMR------DCWHAVPSQRPTFKQLVEDLD 300
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 30/222 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G FG+V+ + T VA+K L + G + F E + LRH LV+L V
Sbjct: 17 LGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VV 73
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E+ + +V +YM SL L E L Q + +A+ + Y+
Sbjct: 74 SEEPIYIVTEYMSKGSLLDFL-----KGEMGKYLRLPQLVDMAAQIASGMAYVERM---N 125
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
+HRD++ +N+++ ++ DFGLAR +E +Y R + +F I
Sbjct: 126 YVHRDLRAANILVGENLVCKVADFGLARLIEDN-EYTARQGA----KF----------PI 170
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
+ PE+ G T KSDV+SFGI++ E+ + R + YP
Sbjct: 171 KWTAPEAALYGRF-TIKSDVWSFGILLTELTTKGR---VPYP 208
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 16/196 (8%)
Query: 526 FGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEM 585
FG + G + V +K L F E Q + +LRH LVQL +E+
Sbjct: 22 FGEVWMGTWNGTTRVAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIY 79
Query: 586 LVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNI 645
+V S +L L +G L+ ++ +AS + Y+ +HR++
Sbjct: 80 IVTEYMSKGSLLDFL----KGEMG-KYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 131
Query: 646 TSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATS 705
++ I + ++ ++ F LA + N++ R+ + + +PE G T
Sbjct: 132 RAANILVGENLVCKVADFGLARLIEDNEYTARQGA------KFPIKWTAPEAALYGRFTI 185
Query: 706 MADVYSFGVVVLEVVT 721
+DV+SFG+++ E+ T
Sbjct: 186 KSDVWSFGILLTELTT 201
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 108/227 (47%), Gaps = 30/227 (13%)
Query: 119 LGSGGFGKVYRAVL-------PSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHL-RHRN 169
LG G FG+V A P+ T VAVK L ++ E+ +E+ + + +H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVL-FRRPENLEAA-APLNWEQRKKIIRGLAAA 227
++ L G C + L ++ +Y +L L RRP LE P + + + + L +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 228 LHYLHEQLE----TQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARN 283
+ + +E + IHRD+ NV++ ++ DFGLAR + H + Y +T++ R
Sbjct: 141 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-HHIDYYKKTTNGRL 199
Query: 284 HQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ ++ PE+ + T +SDV+SFG+++ E+ +
Sbjct: 200 -------------PVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFT 232
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 105/238 (44%), Gaps = 32/238 (13%)
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLL----------FHNNHRIGHSILQWHH 617
+H+N++ L G CT+ G + VI +Y++ L L +N L
Sbjct: 77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 618 RYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHR 677
+ +A + YL +++ IHR++ + + + D ++ F LA + D+ ++
Sbjct: 137 LVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY-YK 192
Query: 678 KATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVK 737
K T+G V+ +M+PE + T +DV+SFGV++ E+ T + +P L K
Sbjct: 193 KTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 248
Query: 738 RVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
+ E +P +L + +MR C + P RP+ +Q++ LD
Sbjct: 249 LLKEGHRMDKPSNCTNELYM--------MMR------DCWHAVPSQRPTFKQLVEDLD 292
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 30/231 (12%)
Query: 116 DEVLGSGGFGKVYRA-VLPSDGTVV--AVKCLAEKGERFEKT-FAAELVAVAHLRHRNLV 171
+EV+G G FG VY +L +DG + AVK L + E + F E + + H N++
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 172 RLRGWCVH-EDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
L G C+ E L+V YM + L + N + + + +A + Y
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKY 140
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
L + + +HRD+ N MLD ++ ++ DFGLAR + + Y + +
Sbjct: 141 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP----- 192
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPD 341
+ ++ ES Q T KSDV+SFG+++ E+++ R A YPD
Sbjct: 193 -------VKWMALESLQTQKF-TTKSDVWSFGVLLWELMT-RGAP--PYPD 232
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 88/208 (42%), Gaps = 30/208 (14%)
Query: 526 FGTAYQG-FLDNHQ---YVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCT- 580
FG Y G LDN + VK L ++F E + H N++ L G C
Sbjct: 35 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 94
Query: 581 EQGEMLVIYDYSATRILSHLLFHNNHR------IGHSILQWHHRYNIIKSLASAILYLHE 634
+G LV+ Y L + + + H IG + +A + YL
Sbjct: 95 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-----------QVAKGMKYLA- 142
Query: 635 EWNEQVIHRNITSSAITLDPDMNPRLGSFALA-EFLTRNDHGHRKATSGNRSVRGIFGYM 693
+++ +HR++ + LD ++ F LA + + + T V+ +M
Sbjct: 143 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK----WM 196
Query: 694 SPEYIESGEATSMADVYSFGVVVLEVVT 721
+ E +++ + T+ +DV+SFGV++ E++T
Sbjct: 197 ALESLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 30/231 (12%)
Query: 116 DEVLGSGGFGKVYRA-VLPSDGTVV--AVKCLAEKGERFEKT-FAAELVAVAHLRHRNLV 171
+EV+G G FG VY +L +DG + AVK L + E + F E + + H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 172 RLRGWCVH-EDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
L G C+ E L+V YM + L + N + + + +A + Y
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKY 148
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
L + + +HRD+ N MLD ++ ++ DFGLAR + + Y + +
Sbjct: 149 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL------ 199
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPD 341
+ ++ ES Q T KSDV+SFG+++ E+++ R A YPD
Sbjct: 200 ------PVKWMALESLQTQKF-TTKSDVWSFGVLLWELMT-RGAP--PYPD 240
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 88/208 (42%), Gaps = 30/208 (14%)
Query: 526 FGTAYQG-FLDNHQ---YVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCT- 580
FG Y G LDN + VK L ++F E + H N++ L G C
Sbjct: 43 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 102
Query: 581 EQGEMLVIYDYSATRILSHLLFHNNHR------IGHSILQWHHRYNIIKSLASAILYLHE 634
+G LV+ Y L + + + H IG + +A + YL
Sbjct: 103 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-----------QVAKGMKYLA- 150
Query: 635 EWNEQVIHRNITSSAITLDPDMNPRLGSFALA-EFLTRNDHGHRKATSGNRSVRGIFGYM 693
+++ +HR++ + LD ++ F LA + + + T V+ +M
Sbjct: 151 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK----WM 204
Query: 694 SPEYIESGEATSMADVYSFGVVVLEVVT 721
+ E +++ + T+ +DV+SFGV++ E++T
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 30/231 (12%)
Query: 116 DEVLGSGGFGKVYRA-VLPSDGTVV--AVKCLAEKGERFEKT-FAAELVAVAHLRHRNLV 171
+EV+G G FG VY +L +DG + AVK L + E + F E + + H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 172 RLRGWCVH-EDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
L G C+ E L+V YM + L + N + + + +A + Y
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKY 147
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
L + + +HRD+ N MLD ++ ++ DFGLAR + + Y + +
Sbjct: 148 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL------ 198
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPD 341
+ ++ ES Q T KSDV+SFG+++ E+++ R A YPD
Sbjct: 199 ------PVKWMALESLQTQKF-TTKSDVWSFGVLLWELMT-RGAP--PYPD 239
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 88/208 (42%), Gaps = 30/208 (14%)
Query: 526 FGTAYQG-FLDNHQ---YVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCT- 580
FG Y G LDN + VK L ++F E + H N++ L G C
Sbjct: 42 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 101
Query: 581 EQGEMLVIYDYSATRILSHLLFHNNHR------IGHSILQWHHRYNIIKSLASAILYLHE 634
+G LV+ Y L + + + H IG + +A + YL
Sbjct: 102 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-----------QVAKGMKYLA- 149
Query: 635 EWNEQVIHRNITSSAITLDPDMNPRLGSFALA-EFLTRNDHGHRKATSGNRSVRGIFGYM 693
+++ +HR++ + LD ++ F LA + + + T V+ +M
Sbjct: 150 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK----WM 203
Query: 694 SPEYIESGEATSMADVYSFGVVVLEVVT 721
+ E +++ + T+ +DV+SFGV++ E++T
Sbjct: 204 ALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 30/231 (12%)
Query: 116 DEVLGSGGFGKVYRA-VLPSDGTVV--AVKCLAEKGERFEKT-FAAELVAVAHLRHRNLV 171
+EV+G G FG VY +L +DG + AVK L + E + F E + + H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 172 RLRGWCVH-EDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
L G C+ E L+V YM + L + N + + + +A + Y
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKY 148
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
L + + +HRD+ N MLD ++ ++ DFGLAR + + Y + +
Sbjct: 149 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL------ 199
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPD 341
+ ++ ES Q T KSDV+SFG+++ E+++ R A YPD
Sbjct: 200 ------PVKWMALESLQTQKF-TTKSDVWSFGVLLWELMT-RGAP--PYPD 240
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 88/208 (42%), Gaps = 30/208 (14%)
Query: 526 FGTAYQG-FLDNHQ---YVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCT- 580
FG Y G LDN + VK L ++F E + H N++ L G C
Sbjct: 43 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 102
Query: 581 EQGEMLVIYDYSATRILSHLLFHNNHR------IGHSILQWHHRYNIIKSLASAILYLHE 634
+G LV+ Y L + + + H IG + +A + YL
Sbjct: 103 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-----------QVAKGMKYLA- 150
Query: 635 EWNEQVIHRNITSSAITLDPDMNPRLGSFALA-EFLTRNDHGHRKATSGNRSVRGIFGYM 693
+++ +HR++ + LD ++ F LA + + + T V+ +M
Sbjct: 151 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK----WM 204
Query: 694 SPEYIESGEATSMADVYSFGVVVLEVVT 721
+ E +++ + T+ +DV+SFGV++ E++T
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 30/222 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G FG+V+ + T VA+K L + G + F E + LRH LV+L V
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VV 82
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E+ + +V +YM SL L E L Q + +A+ + Y+
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFL-----KGEMGKYLRLPQLVDMAAQIASGMAYVERM---N 134
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
+HRD++ +N+++ ++ DFGLAR +E ++ + +F I
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDN-----EXTARQGAKF----------PI 179
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
+ PE+ G T KSDV+SFGI++ E+ + R + YP
Sbjct: 180 KWTAPEAALYGRF-TIKSDVWSFGILLTELTTKGR---VPYP 217
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 84/196 (42%), Gaps = 16/196 (8%)
Query: 526 FGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEM 585
FG + G + V +K L F E Q + +LRH LVQL +E+
Sbjct: 31 FGEVWMGTWNGTTRVAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIY 88
Query: 586 LVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNI 645
+VI S +L L +G L+ ++ +AS + Y+ +HR++
Sbjct: 89 IVIEYMSKGSLLDFL----KGEMG-KYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 646 TSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATS 705
++ I + ++ ++ F LA + N+ R+ + + +PE G T
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEXTARQGA------KFPIKWTAPEAALYGRFTI 194
Query: 706 MADVYSFGVVVLEVVT 721
+DV+SFG+++ E+ T
Sbjct: 195 KSDVWSFGILLTELTT 210
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 117/262 (44%), Gaps = 35/262 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNL 170
F + E +G G +G VY+A G VVA+K L + E T E+ + L H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAA-PLNWEQRKKIIRGLAAALH 229
V+L E++L LV++++ S+D F L PL ++++GLA
Sbjct: 67 VKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA---- 119
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
+ H +++HRD+K N++++++ +L DFGLAR R + +
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF---------GVPVRTYXHEVV 167
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII--LL 347
T+ Y PE + D++S G + E+V+ RRA+ +P D I L
Sbjct: 168 -------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL---FPGDSEIDQLF 216
Query: 348 DWIRRLSDEGKVLQAGDNRLSD 369
R L +V+ G + D
Sbjct: 217 RIFRTLGTPDEVVWPGVTSMPD 238
Score = 33.5 bits (75), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 39/216 (18%), Positives = 98/216 (45%), Gaps = 18/216 (8%)
Query: 509 ISATNNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGM-SKCPALRTRFSNELQNLAR 566
+ + NF + +++ E +G Y+ + V +K++ + ++ + + E+ L
Sbjct: 1 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 567 LRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLA 626
L H N+V+L + ++ +++++ + + + I +++ + + +++ LA
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIK-SYLFQLLQGLA 119
Query: 627 SAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSV 686
+ H + +V+HR++ + ++ + G+ LA+F G T + V
Sbjct: 120 ----FCH---SHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 687 RGIFGYMSPEYIESGEATSMA-DVYSFGVVVLEVVT 721
Y +PE + + S A D++S G + E+VT
Sbjct: 168 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 30/231 (12%)
Query: 116 DEVLGSGGFGKVYRA-VLPSDGTVV--AVKCLAEKGERFEKT-FAAELVAVAHLRHRNLV 171
+EV+G G FG VY +L +DG + AVK L + E + F E + + H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 172 RLRGWCVH-EDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
L G C+ E L+V YM + L + N + + + +A + Y
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKY 146
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
L + + +HRD+ N MLD ++ ++ DFGLAR + + Y + +
Sbjct: 147 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL------ 197
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPD 341
+ ++ ES Q T KSDV+SFG+++ E+++ R A YPD
Sbjct: 198 ------PVKWMALESLQTQKF-TTKSDVWSFGVLLWELMT-RGAP--PYPD 238
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 88/208 (42%), Gaps = 30/208 (14%)
Query: 526 FGTAYQG-FLDNHQ---YVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCT- 580
FG Y G LDN + VK L ++F E + H N++ L G C
Sbjct: 41 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 100
Query: 581 EQGEMLVIYDYSATRILSHLLFHNNHR------IGHSILQWHHRYNIIKSLASAILYLHE 634
+G LV+ Y L + + + H IG + +A + YL
Sbjct: 101 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-----------QVAKGMKYLA- 148
Query: 635 EWNEQVIHRNITSSAITLDPDMNPRLGSFALA-EFLTRNDHGHRKATSGNRSVRGIFGYM 693
+++ +HR++ + LD ++ F LA + + + T V+ +M
Sbjct: 149 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK----WM 202
Query: 694 SPEYIESGEATSMADVYSFGVVVLEVVT 721
+ E +++ + T+ +DV+SFGV++ E++T
Sbjct: 203 ALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 30/222 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G FG+V+ + T VA+K L + G + F E + LRH LV+L V
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VV 82
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E+ + +V +YM SL L E L Q + +A+ + Y+
Sbjct: 83 SEEPIYIVCEYMSKGSLLDFL-----KGEMGKYLRLPQLVDMAAQIASGMAYVERM---N 134
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
+HRD++ +N+++ ++ DFGLAR +E +Y R + +F I
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDN-EYTARQGA----KF----------PI 179
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
+ PE+ G T KSDV+SFGI++ E+ + R + YP
Sbjct: 180 KWTAPEAALYGRF-TIKSDVWSFGILLTELTTKGR---VPYP 217
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 16/196 (8%)
Query: 526 FGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEM 585
FG + G + V +K L F E Q + +LRH LVQL +E+
Sbjct: 31 FGEVWMGTWNGTTRVAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIY 88
Query: 586 LVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNI 645
+V S +L L +G L+ ++ +AS + Y+ +HR++
Sbjct: 89 IVCEYMSKGSLLDFL----KGEMG-KYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 646 TSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATS 705
++ I + ++ ++ F LA + N++ R+ + + +PE G T
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGA------KFPIKWTAPEAALYGRFTI 194
Query: 706 MADVYSFGVVVLEVVT 721
+DV+SFG+++ E+ T
Sbjct: 195 KSDVWSFGILLTELTT 210
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 30/222 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G FG+V+ + T VA+K L + G + F E + LRH LV+L V
Sbjct: 192 LGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VV 248
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E+ + +V +YM SL L E L Q + +A+ + Y+
Sbjct: 249 SEEPIYIVGEYMSKGSLLDFL-----KGETGKYLRLPQLVDMAAQIASGMAYVERM---N 300
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
+HRD++ +N+++ ++ DFGLAR +E +Y R + +F I
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDN-EYTARQGA----KF----------PI 345
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
+ PE+ G T KSDV+SFGI++ E+ + R + YP
Sbjct: 346 KWTAPEAALYGRF-TIKSDVWSFGILLTELTTKGR---VPYP 383
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 85/196 (43%), Gaps = 16/196 (8%)
Query: 526 FGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEM 585
FG + G + V +K L F E Q + +LRH LVQL +E+ +
Sbjct: 197 FGEVWMGTWNGTTRVAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAVVSEE-PI 253
Query: 586 LVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNI 645
++ +Y + L L + L+ ++ +AS + Y+ +HR++
Sbjct: 254 YIVGEYMSKGSLLDFLKGETGKY----LRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 306
Query: 646 TSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATS 705
++ I + ++ ++ F LA + N++ R+ + + +PE G T
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQG------AKFPIKWTAPEAALYGRFTI 360
Query: 706 MADVYSFGVVVLEVVT 721
+DV+SFG+++ E+ T
Sbjct: 361 KSDVWSFGILLTELTT 376
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 30/231 (12%)
Query: 116 DEVLGSGGFGKVYRA-VLPSDGTVV--AVKCLAEKGERFEKT-FAAELVAVAHLRHRNLV 171
+EV+G G FG VY +L +DG + AVK L + E + F E + + H N++
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 172 RLRGWCVH-EDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
L G C+ E L+V YM + L + N + + + +A + Y
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKY 167
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
L + + +HRD+ N MLD ++ ++ DFGLAR + + Y + +
Sbjct: 168 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL------ 218
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPD 341
+ ++ ES Q T KSDV+SFG+++ E+++ R A YPD
Sbjct: 219 ------PVKWMALESLQTQKF-TTKSDVWSFGVLLWELMT-RGAP--PYPD 259
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 88/208 (42%), Gaps = 30/208 (14%)
Query: 526 FGTAYQG-FLDNHQ---YVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCT- 580
FG Y G LDN + VK L ++F E + H N++ L G C
Sbjct: 62 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 121
Query: 581 EQGEMLVIYDYSATRILSHLLFHNNHR------IGHSILQWHHRYNIIKSLASAILYLHE 634
+G LV+ Y L + + + H IG + +A + YL
Sbjct: 122 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-----------QVAKGMKYLA- 169
Query: 635 EWNEQVIHRNITSSAITLDPDMNPRLGSFALA-EFLTRNDHGHRKATSGNRSVRGIFGYM 693
+++ +HR++ + LD ++ F LA + + + T V+ +M
Sbjct: 170 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK----WM 223
Query: 694 SPEYIESGEATSMADVYSFGVVVLEVVT 721
+ E +++ + T+ +DV+SFGV++ E++T
Sbjct: 224 ALESLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 30/231 (12%)
Query: 116 DEVLGSGGFGKVYRA-VLPSDGTVV--AVKCLAEKGERFEKT-FAAELVAVAHLRHRNLV 171
+EV+G G FG VY +L +DG + AVK L + E + F E + + H N++
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 172 RLRGWCVH-EDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
L G C+ E L+V YM + L + N + + + +A + Y
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKY 145
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
L + + +HRD+ N MLD ++ ++ DFGLAR + + Y + +
Sbjct: 146 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL------ 196
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPD 341
+ ++ ES Q T KSDV+SFG+++ E+++ R A YPD
Sbjct: 197 ------PVKWMALESLQTQKF-TTKSDVWSFGVLLWELMT-RGAP--PYPD 237
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 88/208 (42%), Gaps = 30/208 (14%)
Query: 526 FGTAYQG-FLDNHQ---YVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCT- 580
FG Y G LDN + VK L ++F E + H N++ L G C
Sbjct: 40 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 99
Query: 581 EQGEMLVIYDYSATRILSHLLFHNNHR------IGHSILQWHHRYNIIKSLASAILYLHE 634
+G LV+ Y L + + + H IG + +A + YL
Sbjct: 100 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-----------QVAKGMKYLA- 147
Query: 635 EWNEQVIHRNITSSAITLDPDMNPRLGSFALA-EFLTRNDHGHRKATSGNRSVRGIFGYM 693
+++ +HR++ + LD ++ F LA + + + T V+ +M
Sbjct: 148 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK----WM 201
Query: 694 SPEYIESGEATSMADVYSFGVVVLEVVT 721
+ E +++ + T+ +DV+SFGV++ E++T
Sbjct: 202 ALESLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 30/231 (12%)
Query: 116 DEVLGSGGFGKVYRA-VLPSDGTVV--AVKCLAEKGERFEKT-FAAELVAVAHLRHRNLV 171
+EV+G G FG VY +L +DG + AVK L + E + F E + + H N++
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 172 RLRGWCVH-EDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
L G C+ E L+V YM + L + N + + + +A + Y
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKY 143
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
L + + +HRD+ N MLD ++ ++ DFGLAR + + Y + +
Sbjct: 144 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL------ 194
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPD 341
+ ++ ES Q T KSDV+SFG+++ E+++ R A YPD
Sbjct: 195 ------PVKWMALESLQTQKF-TTKSDVWSFGVLLWELMT-RGAP--PYPD 235
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 88/208 (42%), Gaps = 30/208 (14%)
Query: 526 FGTAYQG-FLDNHQ---YVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCT- 580
FG Y G LDN + VK L ++F E + H N++ L G C
Sbjct: 38 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 97
Query: 581 EQGEMLVIYDYSATRILSHLLFHNNHR------IGHSILQWHHRYNIIKSLASAILYLHE 634
+G LV+ Y L + + + H IG + +A + YL
Sbjct: 98 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-----------QVAKGMKYLA- 145
Query: 635 EWNEQVIHRNITSSAITLDPDMNPRLGSFALA-EFLTRNDHGHRKATSGNRSVRGIFGYM 693
+++ +HR++ + LD ++ F LA + + + T V+ +M
Sbjct: 146 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK----WM 199
Query: 694 SPEYIESGEATSMADVYSFGVVVLEVVT 721
+ E +++ + T+ +DV+SFGV++ E++T
Sbjct: 200 ALESLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 112/230 (48%), Gaps = 31/230 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDG----TVVAVKCLAE-KGERFEKTFAAELVAVAHLRH 167
F + +VLGSG FG VY+ + +G VA+K L E + K E +A + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
++ RL G C+ + L+ MP L + +N+ + LNW + +A
Sbjct: 79 PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 131
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
++YL ++ +++HRD+ NV++ + + ++ DFG A+ L A ++H
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLL-----------GAEEKEYH 177
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVD 336
AE ++ I ++ ES + T +SDV+S+G+ V E+++ G + D
Sbjct: 178 -AEGGKV--PIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYD 223
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 90/218 (41%), Gaps = 19/218 (8%)
Query: 509 ISATNNFSESQRVAEMDFGTAYQGFLDNHQY-----VLVKRLGMSKCPALRTRFSNELQN 563
I F + + + FGT Y+G V +K L + P +E
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 564 LARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
+A + + ++ +L G C L++ +L ++ H ++ +L W
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 126
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
+A + YL + +++HR++ + + + + ++ F A+ L + + A G
Sbjct: 127 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH-AEGGK 182
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
++ +M+ E I T +DV+S+GV V E++T
Sbjct: 183 VPIK----WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 31/229 (13%)
Query: 110 SNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGER---FEKTFAAELVAVAHLR 166
S+ ++ E+LG GG +V+ A D VAVK L R F F E A L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 167 HRNLVRLRGWCVHEDQL----LLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIR 222
H +V + E +V +Y +D V R + + P+ ++ ++I
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEY-----VDGVTLR--DIVHTEGPMTPKRAIEVIA 123
Query: 223 GLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSAR 282
AL++ H+ IIHRDVK +N+++ + ++ DFG+AR +
Sbjct: 124 DACQALNFSHQN---GIIHRDVKPANILISATNAVKVVDFGIARAIA------------- 167
Query: 283 NHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
+ + +T + GT YL PE + SV A+SDV+S G V+ EV++G
Sbjct: 168 DSGNSVXQTAAVIGTAQYLSPEQARGDSV-DARSDVYSLGCVLYEVLTG 215
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 92/216 (42%), Gaps = 23/216 (10%)
Query: 534 LDNHQYVLVK--RLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEM------ 585
L +H+ V VK R +++ P+ RF E QN A L H +V + + T + E
Sbjct: 34 LRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV--YDTGEAETPAGPLP 91
Query: 586 LVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNI 645
++ +Y L ++ H G + +I A+ + H+ +IHR++
Sbjct: 92 YIVMEYVDGVTLRDIV----HTEGP--MTPKRAIEVIADACQALNFSHQNG---IIHRDV 142
Query: 646 TSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATS 705
+ I + ++ F +A + D G+ + +V G Y+SPE +
Sbjct: 143 KPANILISATNAVKVVDFGIARAIA--DSGNSVXQTA--AVIGTAQYLSPEQARGDSVDA 198
Query: 706 MADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHE 741
+DVYS G V+ EV+TG+ P + + V E
Sbjct: 199 RSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 112/230 (48%), Gaps = 31/230 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDG----TVVAVKCLAE-KGERFEKTFAAELVAVAHLRH 167
F + +VL SG FG VY+ + +G VA+K L E + K E +A + +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
++ RL G C+ + L+ MP L + +N+ + LNW + +A
Sbjct: 84 PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 136
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
++YL ++ +++HRD+ NV++ + + ++ DFGLA+ L A ++H
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYH 182
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVD 336
AE ++ I ++ ES + T +SDV+S+G+ V E+++ G + D
Sbjct: 183 -AEGGKV--PIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYD 228
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 92/218 (42%), Gaps = 19/218 (8%)
Query: 509 ISATNNFSESQRVAEMDFGTAYQGFLDNHQY-----VLVKRLGMSKCPALRTRFSNELQN 563
I F + + ++ FGT Y+G V +K L + P +E
Sbjct: 18 ILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 77
Query: 564 LARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
+A + + ++ +L G C L++ +L ++ H ++ +L W
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 131
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
+A + YL + +++HR++ + + + + ++ F LA+ L + + A G
Sbjct: 132 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH-AEGGK 187
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
++ +M+ E I T +DV+S+GV V E++T
Sbjct: 188 VPIK----WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 111/242 (45%), Gaps = 17/242 (7%)
Query: 108 IGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLR 166
I + ++ EV+GSG V A VA+K + EK + E+ A++
Sbjct: 7 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCH 66
Query: 167 HRNLVRLRGWCVHEDQLLLVYDYMPNRS-LDRVLFRRPENLEAAAPLNWEQRKKIIRGLA 225
H N+V V +D+L LV + S LD + + + L+ I+R +
Sbjct: 67 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 226 AALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQ 285
L YLH+ + IHRDVK N++L + ++ DFG++ +L ++ +
Sbjct: 127 EGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFL----------ATGGDIT 173
Query: 286 FHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII 345
+ T + GT ++ PE ++ K+D++SFGI +E+ +G A YP +++
Sbjct: 174 RNKVRKTFV-GTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG-AAPYHKYPPMKVL 231
Query: 346 LL 347
+L
Sbjct: 232 ML 233
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 113/259 (43%), Gaps = 22/259 (8%)
Query: 540 VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY----SATR 595
V +KR+ + KC E+Q +++ H N+V + E+ ++ S
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 97
Query: 596 ILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPD 655
I+ H++ H+ G +L I++ + + YLH+ N Q IHR++ + I L D
Sbjct: 98 IIKHIVAKGEHKSG--VLDESTIATILREVLEGLEYLHK--NGQ-IHRDVKAGNILLGED 152
Query: 656 MNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSM-ADVYSFGV 714
+ ++ F ++ FL R ++ G +M+PE +E AD++SFG+
Sbjct: 153 GSVQIADFGVSAFLATGGDITRNKV--RKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGI 210
Query: 715 VVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAE--LVDLSLNGEYNHKELMRLIKL 772
+E+ TG P +L+ + P E + D + +Y K ++I L
Sbjct: 211 TAIELATGAAPYHKYPPMKVLMLTLQ----NDPPSLETGVQDKEMLKKYG-KSFRKMISL 265
Query: 773 GIACTLSNPELRPSMRQIL 791
C +PE RP+ ++L
Sbjct: 266 ---CLQKDPEKRPTAAELL 281
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 112/230 (48%), Gaps = 31/230 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDG----TVVAVKCLAE-KGERFEKTFAAELVAVAHLRH 167
F + +VLGSG FG VY+ + +G VA+K L E + K E +A + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
++ RL G C+ + L+ MP L + +N+ + LNW + +A
Sbjct: 79 PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 131
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
++YL ++ +++HRD+ NV++ + + ++ DFG A+ L A ++H
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLL-----------GAEEKEYH 177
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVD 336
AE ++ I ++ ES + T +SDV+S+G+ V E+++ G + D
Sbjct: 178 -AEGGKV--PIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYD 223
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 90/218 (41%), Gaps = 19/218 (8%)
Query: 509 ISATNNFSESQRVAEMDFGTAYQGFLDNHQY-----VLVKRLGMSKCPALRTRFSNELQN 563
I F + + + FGT Y+G V +K L + P +E
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 564 LARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
+A + + ++ +L G C L++ +L ++ H ++ +L W
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 126
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
+A + YL + +++HR++ + + + + ++ F A+ L + + A G
Sbjct: 127 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH-AEGGK 182
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
++ +M+ E I T +DV+S+GV V E++T
Sbjct: 183 VPIK----WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 133/319 (41%), Gaps = 57/319 (17%)
Query: 119 LGSGGFGKVY----RAVLPSDG-TVVAVKCLAEKGERFEKT-FAAELVAVAHLRHRNLVR 172
LG G FG VY R ++ + T VAVK + E E+ F E + ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 173 LRGWCVHEDQLLLVYDYMPN---RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
L G L+V + M + +S R L EN P ++ ++ +A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
YL+ + + +HR++ N M+ + ++GDFG+ R + +E Y
Sbjct: 145 YLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDI-YETDYY-------------- 186
Query: 290 ETTRIGG----TIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII 345
R GG + ++ PES + G V T SD++SFG+V+ E+ S ++Q++
Sbjct: 187 ---RKGGKGLLPVRWMAPESLKDG-VFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 242
Query: 346 LLDWIRRLSDEGKVLQAGDN---RLSDGSYKLCDMEXXXXXXXXXXXXNPHLRPSMKWVI 402
+ +G L DN R++D ++C NP++RP+ ++
Sbjct: 243 ------KFVMDGGYLDQPDNCPERVTD-LMRMC------------WQFNPNMRPTFLEIV 283
Query: 403 EAVSGSYSGKLPALPSFQS 421
+ P + F S
Sbjct: 284 NLLKDDLHPSFPEVSFFHS 302
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 118/279 (42%), Gaps = 32/279 (11%)
Query: 526 FGTAYQGFL------DNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWC 579
FG Y+G + V VK + S R F NE + ++V+L G
Sbjct: 30 FGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVV 89
Query: 580 TEQGEMLVIYDYSA----TRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEE 635
++ LV+ + A L L + G + +A + YL+ +
Sbjct: 90 SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK 149
Query: 636 WNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSP 695
+ +HRN+ + + D ++G F + + D+ +RK G VR +M+P
Sbjct: 150 ---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDY-YRKGGKGLLPVR----WMAP 201
Query: 696 EYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDL 755
E ++ G T+ +D++SFGVV+ E+ + + + +GL ++V +F +D
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSNEQVLKFVMD----GGYLDQ 253
Query: 756 SLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSIL 794
N +LMR+ C NP +RP+ +I+++L
Sbjct: 254 PDNCPERVTDLMRM------CWQFNPNMRPTFLEIVNLL 286
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 112/230 (48%), Gaps = 31/230 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDG----TVVAVKCLAE-KGERFEKTFAAELVAVAHLRH 167
F + +VL SG FG VY+ + +G VA+K L E + K E +A + +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
++ RL G C+ + L+ MP L + +N+ + LNW + +A
Sbjct: 77 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 129
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
++YL ++ +++HRD+ NV++ + + ++ DFGLA+ L A ++H
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYH 175
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVD 336
AE ++ I ++ ES + T +SDV+S+G+ V E+++ G + D
Sbjct: 176 -AEGGKV--PIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYD 221
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 91/218 (41%), Gaps = 19/218 (8%)
Query: 509 ISATNNFSESQRVAEMDFGTAYQGFLDNHQY-----VLVKRLGMSKCPALRTRFSNELQN 563
I F + + ++ FGT Y+G V +K L + P +E
Sbjct: 11 ILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 564 LARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
+A + + ++ +L G C L+ +L ++ H ++ +L W
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 124
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
+A + YL + +++HR++ + + + + ++ F LA+ L + + A G
Sbjct: 125 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH-AEGGK 180
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
++ +M+ E I T +DV+S+GV V E++T
Sbjct: 181 VPIK----WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 30/222 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G FG+V+ + T VA+K L + G + F E + LRH LV+L V
Sbjct: 23 LGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VV 79
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E+ + +V +YM SL L E L Q + +A+ + Y+
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFL-----KGETGKYLRLPQLVDMSAQIASGMAYVERM---N 131
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
+HRD++ +N+++ ++ DFGLAR +E +Y R + +F I
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLARLIEDN-EYTARQGA----KF----------PI 176
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
+ PE+ G T KSDV+SFGI++ E+ + R + YP
Sbjct: 177 KWTAPEAALYGRF-TIKSDVWSFGILLTELTTKGR---VPYP 214
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 84/196 (42%), Gaps = 16/196 (8%)
Query: 526 FGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEM 585
FG + G + V +K L F E Q + +LRH LVQL +E+ +
Sbjct: 28 FGEVWMGTWNGTTRVAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAVVSEE-PI 84
Query: 586 LVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNI 645
++ +Y L L + L+ ++ +AS + Y+ +HR++
Sbjct: 85 YIVTEYMNKGSLLDFLKGETGKY----LRLPQLVDMSAQIASGMAYVE---RMNYVHRDL 137
Query: 646 TSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATS 705
++ I + ++ ++ F LA + N++ R+ + + +PE G T
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDNEYTARQG------AKFPIKWTAPEAALYGRFTI 191
Query: 706 MADVYSFGVVVLEVVT 721
+DV+SFG+++ E+ T
Sbjct: 192 KSDVWSFGILLTELTT 207
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 133/320 (41%), Gaps = 59/320 (18%)
Query: 119 LGSGGFGKVY----RAVLPSDG-TVVAVKCLAEKGERFEKT-FAAELVAVAHLRHRNLVR 172
LG G FG VY R ++ + T VAVK + E E+ F E + ++VR
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 173 LRGWCVHEDQLLLVYDYMPN---RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
L G L+V + M + +S R L EN P ++ ++ +A +
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
YL+ + + +HR++ N M+ + ++GDFG+ R + +E Y
Sbjct: 146 YLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDI-YETDYY-------------- 187
Query: 290 ETTRIGGTIGYLP-----PESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQI 344
R GG G LP PES + G V T SD++SFG+V+ E+ S ++Q+
Sbjct: 188 ---RKGGK-GLLPVRWMAPESLKDG-VFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV 242
Query: 345 ILLDWIRRLSDEGKVLQAGDN---RLSDGSYKLCDMEXXXXXXXXXXXXNPHLRPSMKWV 401
+ + +G L DN R++D ++C NP++RP+ +
Sbjct: 243 L------KFVMDGGYLDQPDNCPERVTD-LMRMC------------WQFNPNMRPTFLEI 283
Query: 402 IEAVSGSYSGKLPALPSFQS 421
+ + P + F S
Sbjct: 284 VNLLKDDLHPSFPEVSFFHS 303
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 118/279 (42%), Gaps = 32/279 (11%)
Query: 526 FGTAYQGFL------DNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWC 579
FG Y+G + V VK + S R F NE + ++V+L G
Sbjct: 31 FGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVV 90
Query: 580 TEQGEMLVIYDYSA----TRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEE 635
++ LV+ + A L L + G + +A + YL+ +
Sbjct: 91 SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK 150
Query: 636 WNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSP 695
+ +HRN+ + + D ++G F + + D+ +RK G VR +M+P
Sbjct: 151 ---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDY-YRKGGKGLLPVR----WMAP 202
Query: 696 EYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDL 755
E ++ G T+ +D++SFGVV+ E+ + + + +GL ++V +F +D
Sbjct: 203 ESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSNEQVLKFVMD----GGYLDQ 254
Query: 756 SLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSIL 794
N +LMR+ C NP +RP+ +I+++L
Sbjct: 255 PDNCPERVTDLMRM------CWQFNPNMRPTFLEIVNLL 287
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 25/215 (11%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVK-CLAEKGERFEKTFAAELVAVAHLRHRNLVRLRG 175
E +G G FG+V+ L +D T+VAVK C + F E + H N+VRL G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 176 WCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQL 235
C + + +V + + + D + F R E A L + +++ AA + YL +
Sbjct: 180 VCTQKQPIYIVMELV--QGGDFLTFLRTE----GARLRVKTLLQMVGDAAAGMEYLESKC 233
Query: 236 ETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIG 295
IHRD+ N ++ + ++ DFG++R E + +S Q + T
Sbjct: 234 ---CIHRDLAARNCLVTEKNVLKISDFGMSR----EEADGVXAASGGLRQVPVKWTA--- 283
Query: 296 GTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PE+ G +++SDV+SFGI++ E S
Sbjct: 284 -------PEALNYGRY-SSESDVWSFGILLWETFS 310
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 90/204 (44%), Gaps = 14/204 (6%)
Query: 519 QRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCG 577
+++ +FG + G L ++ V VK + P L+ +F E + L + H N+V+L G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 578 WCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWN 637
CT++ + ++ + L R+ L ++ A+ + YL +
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTL-----LQMVGDAAAGMEYLE---S 231
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
+ IHR++ + + ++ F ++ G A+ G R V + +PE
Sbjct: 232 KCCIHRDLAARNCLVTEKNVLKISDFGMSR---EEADGVXAASGGLRQVP--VKWTAPEA 286
Query: 698 IESGEATSMADVYSFGVVVLEVVT 721
+ G +S +DV+SFG+++ E +
Sbjct: 287 LNYGRYSSESDVWSFGILLWETFS 310
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 112/230 (48%), Gaps = 31/230 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDG----TVVAVKCLAE-KGERFEKTFAAELVAVAHLRH 167
F + +VL SG FG VY+ + +G VA+K L E + K E +A + +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
++ RL G C+ + L+ MP L + +N+ + LNW + +A
Sbjct: 84 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 136
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
++YL ++ +++HRD+ NV++ + + ++ DFGLA+ L A ++H
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYH 182
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVD 336
AE ++ I ++ ES + T +SDV+S+G+ V E+++ G + D
Sbjct: 183 -AEGGKV--PIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYD 228
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 91/218 (41%), Gaps = 19/218 (8%)
Query: 509 ISATNNFSESQRVAEMDFGTAYQGFLDNHQY-----VLVKRLGMSKCPALRTRFSNELQN 563
I F + + ++ FGT Y+G V +K L + P +E
Sbjct: 18 ILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 77
Query: 564 LARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
+A + + ++ +L G C L+ +L ++ H ++ +L W
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 131
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
+A + YL + +++HR++ + + + + ++ F LA+ L + + A G
Sbjct: 132 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH-AEGGK 187
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
++ +M+ E I T +DV+S+GV V E++T
Sbjct: 188 VPIK----WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 112/230 (48%), Gaps = 31/230 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDG----TVVAVKCLAE-KGERFEKTFAAELVAVAHLRH 167
F + +VLGSG FG VY+ + +G VA+K L E + K E +A + +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
++ RL G C+ + L+ MP L + +N+ + LNW + +A
Sbjct: 84 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 136
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
++YL ++ +++HRD+ NV++ + + ++ DFG A+ L A ++H
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLL-----------GAEEKEYH 182
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVD 336
AE ++ I ++ ES + T +SDV+S+G+ V E+++ G + D
Sbjct: 183 -AEGGKV--PIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYD 228
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 89/218 (40%), Gaps = 19/218 (8%)
Query: 509 ISATNNFSESQRVAEMDFGTAYQGFLDNHQY-----VLVKRLGMSKCPALRTRFSNELQN 563
I F + + + FGT Y+G V +K L + P +E
Sbjct: 18 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 77
Query: 564 LARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
+A + + ++ +L G C L+ +L ++ H ++ +L W
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 131
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
+A + YL + +++HR++ + + + + ++ F A+ L + + A G
Sbjct: 132 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH-AEGGK 187
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
++ +M+ E I T +DV+S+GV V E++T
Sbjct: 188 VPIK----WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 105/236 (44%), Gaps = 33/236 (13%)
Query: 104 AELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELV 160
A+L+IG+ + + +G G F KV A G VAVK + + +K F E+
Sbjct: 2 ADLHIGN--YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVR 58
Query: 161 AVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKI 220
+ L H N+V+L E L LV +Y + + L A + ++ +
Sbjct: 59 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVF-------DYLVAHGWMKEKEARAK 111
Query: 221 IRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSS 280
R + +A+ Y H++ I+HRD+K N++LD+ N ++ DFG + +E + + +
Sbjct: 112 FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDT 164
Query: 281 ARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
G+ Y PE FQ + DV+S G+++ +VSG D
Sbjct: 165 -------------FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 82/182 (45%), Gaps = 33/182 (18%)
Query: 558 SNELQNLAR-------LRHRNLVQLCGWCTEQGEMLVIYDY-SATRILSHLLFHNNHRIG 609
S+ LQ L R L H N+V+L + + ++ +Y S + +L +
Sbjct: 47 SSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-------VA 99
Query: 610 HSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALA-EF 668
H ++ + + SA+ Y H+++ ++HR++ + + LD DMN ++ F + EF
Sbjct: 100 HGWMKEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF 156
Query: 669 LTRNDHGHRKATSGNR--SVRGIFGYMSPEYIESGEATSM-ADVYSFGVVVLEVVTGQMA 725
T GN+ + G Y +PE + + DV+S GV++ +V+G +
Sbjct: 157 -----------TFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 205
Query: 726 VD 727
D
Sbjct: 206 FD 207
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 112/230 (48%), Gaps = 31/230 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDG----TVVAVKCLAE-KGERFEKTFAAELVAVAHLRH 167
F + +VLGSG FG VY+ + +G VA+K L E + K E +A + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
++ RL G C+ + L+ MP L + +N+ + LNW + +A
Sbjct: 77 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 129
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
++YL ++ +++HRD+ NV++ + + ++ DFG A+ L A ++H
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLL-----------GAEEKEYH 175
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVD 336
AE ++ I ++ ES + T +SDV+S+G+ V E+++ G + D
Sbjct: 176 -AEGGKV--PIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYD 221
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/289 (18%), Positives = 115/289 (39%), Gaps = 35/289 (12%)
Query: 509 ISATNNFSESQRVAEMDFGTAYQGFLDNHQY-----VLVKRLGMSKCPALRTRFSNELQN 563
I F + + + FGT Y+G V +K L + P +E
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 564 LARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
+A + + ++ +L G C L+ +L ++ H ++ +L W
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 124
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
+A + YL + +++HR++ + + + + ++ F A+ L + + A G
Sbjct: 125 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH-AEGGK 180
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEF 742
++ +M+ E I T +DV+S+GV V E++T G D +P + + +
Sbjct: 181 VPIK----WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKG 235
Query: 743 EARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQIL 791
E +P +D+ + + + C + + + RP R+++
Sbjct: 236 ERLPQPPICTIDVYM--------------IMVKCWMIDADSRPKFRELI 270
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 112/230 (48%), Gaps = 31/230 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDG----TVVAVKCLAE-KGERFEKTFAAELVAVAHLRH 167
F + +VLGSG FG VY+ + +G VA+K L E + K E +A + +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
++ RL G C+ + L+ MP L + +N+ + LNW + +A
Sbjct: 81 PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 133
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
++YL ++ +++HRD+ NV++ + + ++ DFG A+ L A ++H
Sbjct: 134 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLL-----------GAEEKEYH 179
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVD 336
AE ++ I ++ ES + T +SDV+S+G+ V E+++ G + D
Sbjct: 180 -AEGGKV--PIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYD 225
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 90/218 (41%), Gaps = 19/218 (8%)
Query: 509 ISATNNFSESQRVAEMDFGTAYQGFLDNHQY-----VLVKRLGMSKCPALRTRFSNELQN 563
I F + + + FGT Y+G V +K L + P +E
Sbjct: 15 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 74
Query: 564 LARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
+A + + ++ +L G C L++ +L ++ H ++ +L W
Sbjct: 75 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 128
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
+A + YL + +++HR++ + + + + ++ F A+ L + + A G
Sbjct: 129 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH-AEGGK 184
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
++ +M+ E I T +DV+S+GV V E++T
Sbjct: 185 VPIK----WMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 102/222 (45%), Gaps = 30/222 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G FG+V+ + T VA+K L + G + F E + +RH LV+L V
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKIRHEKLVQLYA-VV 82
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E+ + +V +YM SL L E L Q + +A+ + Y+
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFL-----KGEMGKYLRLPQLVDMAAQIASGMAYVERM---N 134
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
+HRD++ +N+++ ++ DFGLAR +E +Y R + +F I
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDN-EYTARQGA----KF----------PI 179
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
+ PE+ G T KSDV+SFGI++ E+ + R + YP
Sbjct: 180 KWTAPEAALYGRF-TIKSDVWSFGILLTELTTKGR---VPYP 217
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 84/196 (42%), Gaps = 16/196 (8%)
Query: 526 FGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEM 585
FG + G + V +K L F E Q + ++RH LVQL +E+
Sbjct: 31 FGEVWMGTWNGTTRVAIKTLKPGTMSP--EAFLQEAQVMKKIRHEKLVQLYAVVSEEPIY 88
Query: 586 LVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNI 645
+V S +L L +G L+ ++ +AS + Y+ +HR++
Sbjct: 89 IVTEYMSKGSLLDFL----KGEMG-KYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 646 TSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATS 705
++ I + ++ ++ F LA + N++ R+ + + +PE G T
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGA------KFPIKWTAPEAALYGRFTI 194
Query: 706 MADVYSFGVVVLEVVT 721
+DV+SFG+++ E+ T
Sbjct: 195 KSDVWSFGILLTELTT 210
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 112/230 (48%), Gaps = 31/230 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDG----TVVAVKCLAE-KGERFEKTFAAELVAVAHLRH 167
F + +VLGSG FG VY+ + +G VA+K L E + K E +A + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
++ RL G C+ + L+ MP L + +N+ + LNW + +A
Sbjct: 79 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 131
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
++YL ++ +++HRD+ NV++ + + ++ DFG A+ L A ++H
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLL-----------GAEEKEYH 177
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVD 336
AE ++ I ++ ES + T +SDV+S+G+ V E+++ G + D
Sbjct: 178 -AEGGKV--PIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYD 223
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 89/218 (40%), Gaps = 19/218 (8%)
Query: 509 ISATNNFSESQRVAEMDFGTAYQGFLDNHQY-----VLVKRLGMSKCPALRTRFSNELQN 563
I F + + + FGT Y+G V +K L + P +E
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 564 LARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
+A + + ++ +L G C L+ +L ++ H ++ +L W
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 126
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
+A + YL + +++HR++ + + + + ++ F A+ L + + A G
Sbjct: 127 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH-AEGGK 182
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
++ +M+ E I T +DV+S+GV V E++T
Sbjct: 183 VPIK----WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 112/230 (48%), Gaps = 31/230 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDG----TVVAVKCLAE-KGERFEKTFAAELVAVAHLRH 167
F + +VLGSG FG VY+ + +G VA+ L E + K E +A + +
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
++ RL G C+ + L+ MP L + +N+ + LNW + +A
Sbjct: 111 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 163
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
++YL ++ +++HRD+ NV++ + + ++ DFGLA+ L A ++H
Sbjct: 164 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYH 209
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVD 336
AE ++ I ++ ES + T +SDV+S+G+ V E+++ G + D
Sbjct: 210 -AEGGKV--PIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYD 255
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 89/218 (40%), Gaps = 19/218 (8%)
Query: 509 ISATNNFSESQRVAEMDFGTAYQGFLDNHQY-----VLVKRLGMSKCPALRTRFSNELQN 563
I F + + + FGT Y+G V + L + P +E
Sbjct: 45 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYV 104
Query: 564 LARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
+A + + ++ +L G C L+ +L ++ H ++ +L W
Sbjct: 105 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 158
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
+A + YL + +++HR++ + + + + ++ F LA+ L + + A G
Sbjct: 159 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH-AEGGK 214
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
++ +M+ E I T +DV+S+GV V E++T
Sbjct: 215 VPIK----WMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 101/222 (45%), Gaps = 30/222 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G FG+V+ + T VA+K L + G + F E + LRH LV+L V
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VV 82
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E+ + +V +YM SL L E L Q + +A+ + Y+
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFL-----KGEMGKYLRLPQLVDMAAQIASGMAYVERM---N 134
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
+HRD+ +N+++ ++ DFGLAR +E +Y R + +F I
Sbjct: 135 YVHRDLAAANILVGENLVCKVADFGLARLIEDN-EYTARQGA----KF----------PI 179
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
+ PE+ G T KSDV+SFGI++ E+ + R + YP
Sbjct: 180 KWTAPEAALYGRF-TIKSDVWSFGILLTELTTKGR---VPYP 217
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 16/196 (8%)
Query: 526 FGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEM 585
FG + G + V +K L F E Q + +LRH LVQL +E+
Sbjct: 31 FGEVWMGTWNGTTRVAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIY 88
Query: 586 LVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNI 645
+V S +L L +G L+ ++ +AS + Y+ +HR++
Sbjct: 89 IVTEYMSKGSLLDFL----KGEMG-KYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 646 TSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATS 705
++ I + ++ ++ F LA + N++ R+ + + +PE G T
Sbjct: 141 AAANILVGENLVCKVADFGLARLIEDNEYTARQGA------KFPIKWTAPEAALYGRFTI 194
Query: 706 MADVYSFGVVVLEVVT 721
+DV+SFG+++ E+ T
Sbjct: 195 KSDVWSFGILLTELTT 210
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 25/212 (11%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G +G+VY V VAVK L E E+ F E + ++H NLV+L G C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E ++ ++M +L L R E A + +I ++A+ YL ++
Sbjct: 284 REPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQI----SSAMEYLEKK---N 335
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
IHR++ N ++ + ++ DFGL+R + + + H I T
Sbjct: 336 FIHRNLAARNCLVGENHLVKVADFGLSRLM-----------TGDTYTAHAGAKFPIKWTA 384
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PES + KSDV++FG+++ E+ +
Sbjct: 385 ----PESLAYNKFSI-KSDVWAFGVLLWEIAT 411
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 118/273 (43%), Gaps = 44/273 (16%)
Query: 526 FGTAYQGFLDNHQY-VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGE 584
+G Y+G + V VK L F E + ++H NLVQL G CT +
Sbjct: 230 YGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVCTREPP 287
Query: 585 MLVIYDY-SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHR 643
+I ++ + +L +L N + +L + + ++SA+ YL + + IHR
Sbjct: 288 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLEK---KNFIHR 339
Query: 644 NITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEA 703
N+ + + + ++ F L+ +T + + + + + + +PE + +
Sbjct: 340 NLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAKFPIKWTAPESLAYNKF 393
Query: 704 TSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEAR----KRP--LAELVDLSL 757
+ +DV++FGV++ E+ T M+ P G+ + +V+E + +RP E V
Sbjct: 394 SIKSDVWAFGVLLWEIATYGMS---PYP-GIDLSQVYELLEKDYRMERPEGCPEKV---- 445
Query: 758 NGEYNHKELMRLIKLGIACTLSNPELRPSMRQI 790
ELMR AC NP RPS +I
Sbjct: 446 ------YELMR------ACWQWNPSDRPSFAEI 466
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 99/233 (42%), Gaps = 37/233 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVK-CLAEKGERFEKTFAAELVAVAHLRHRNLV 171
++ E LG+GGFG V R + G VA+K C E + + + E+ + L H N+V
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 172 RLR------GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLA 225
R D LL +Y L + L E L + ++ ++
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL----NQFENCCGLKEGPIRTLLSDIS 132
Query: 226 AALHYLHEQLETQIIHRDVKTSNVMLD---SQYNARLGDFGLARWLEH-ELQYQMRTSSA 281
+AL YLH E +IIHRD+K N++L + ++ D G A+ L+ EL
Sbjct: 133 SALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL--------- 180
Query: 282 RNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRA 334
T GT+ YL PE ++ T D +SFG + E ++G R
Sbjct: 181 ---------CTEFVGTLQYLAPELLEQKKY-TVTVDYWSFGTLAFECITGFRP 223
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 76/196 (38%), Gaps = 21/196 (10%)
Query: 535 DNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQL------CGWCTEQGEMLVI 588
D + V +K+ P R R+ E+Q + +L H N+V L+
Sbjct: 38 DTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLA 97
Query: 589 YDYSATRILSHLL--FHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNIT 646
+Y L L F N + ++ ++ ++SA+ YLHE ++IHR++
Sbjct: 98 MEYCEGGDLRKYLNQFENCCGLKEGPIR-----TLLSDISSALRYLHEN---RIIHRDLK 149
Query: 647 SSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSM 706
I L P + + D G G Y++PE +E + T
Sbjct: 150 PENIVLQPGPQRLIHKIIDLGYAKELDQGELCT-----EFVGTLQYLAPELLEQKKYTVT 204
Query: 707 ADVYSFGVVVLEVVTG 722
D +SFG + E +TG
Sbjct: 205 VDYWSFGTLAFECITG 220
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 25/215 (11%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVK-CLAEKGERFEKTFAAELVAVAHLRHRNLVRLRG 175
E +G G FG+V+ L +D T+VAVK C + F E + H N+VRL G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 176 WCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQL 235
C + + +V + + + D + F R E A L + +++ AA + YL +
Sbjct: 180 VCTQKQPIYIVMELV--QGGDFLTFLRTE----GARLRVKTLLQMVGDAAAGMEYLESKC 233
Query: 236 ETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIG 295
IHRD+ N ++ + ++ DFG++R E + +S Q + T
Sbjct: 234 ---CIHRDLAARNCLVTEKNVLKISDFGMSR----EEADGVYAASGGLRQVPVKWTA--- 283
Query: 296 GTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PE+ G +++SDV+SFGI++ E S
Sbjct: 284 -------PEALNYGRY-SSESDVWSFGILLWETFS 310
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 90/204 (44%), Gaps = 14/204 (6%)
Query: 519 QRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCG 577
+++ +FG + G L ++ V VK + P L+ +F E + L + H N+V+L G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 578 WCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWN 637
CT++ + ++ + L R+ L ++ A+ + YL +
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTL-----LQMVGDAAAGMEYLE---S 231
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
+ IHR++ + + ++ F ++ G A+ G R V + +PE
Sbjct: 232 KCCIHRDLAARNCLVTEKNVLKISDFGMSR---EEADGVYAASGGLRQVP--VKWTAPEA 286
Query: 698 IESGEATSMADVYSFGVVVLEVVT 721
+ G +S +DV+SFG+++ E +
Sbjct: 287 LNYGRYSSESDVWSFGILLWETFS 310
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 99/233 (42%), Gaps = 37/233 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVK-CLAEKGERFEKTFAAELVAVAHLRHRNLV 171
++ E LG+GGFG V R + G VA+K C E + + + E+ + L H N+V
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 172 RLR------GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLA 225
R D LL +Y L + L E L + ++ ++
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL----NQFENCCGLKEGPIRTLLSDIS 131
Query: 226 AALHYLHEQLETQIIHRDVKTSNVMLD---SQYNARLGDFGLARWLEH-ELQYQMRTSSA 281
+AL YLH E +IIHRD+K N++L + ++ D G A+ L+ EL
Sbjct: 132 SALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL--------- 179
Query: 282 RNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRA 334
T GT+ YL PE ++ T D +SFG + E ++G R
Sbjct: 180 ---------CTEFVGTLQYLAPELLEQKKY-TVTVDYWSFGTLAFECITGFRP 222
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 76/196 (38%), Gaps = 21/196 (10%)
Query: 535 DNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQL------CGWCTEQGEMLVI 588
D + V +K+ P R R+ E+Q + +L H N+V L+
Sbjct: 37 DTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLA 96
Query: 589 YDYSATRILSHLL--FHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNIT 646
+Y L L F N + ++ ++ ++SA+ YLHE ++IHR++
Sbjct: 97 MEYCEGGDLRKYLNQFENCCGLKEGPIR-----TLLSDISSALRYLHEN---RIIHRDLK 148
Query: 647 SSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSM 706
I L P + + D G G Y++PE +E + T
Sbjct: 149 PENIVLQPGPQRLIHKIIDLGYAKELDQGELCT-----EFVGTLQYLAPELLEQKKYTVT 203
Query: 707 ADVYSFGVVVLEVVTG 722
D +SFG + E +TG
Sbjct: 204 VDYWSFGTLAFECITG 219
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 27/212 (12%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
+GSG FG V+ + V A+K + E G E F E + L H LV+L G C+
Sbjct: 35 IGSGQFGLVHLGYWLNKDKV-AIKTIKE-GSMSEDDFIEEAEVMMKLSHPKLVQLYGVCL 92
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
+ + LV+++M + L L R L AA E + + + YL E
Sbjct: 93 EQAPICLVFEFMEHGCLSDYL-RTQRGLFAA-----ETLLGMCLDVCEGMAYLEEAC--- 143
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
+IHRD+ N ++ ++ DFG+ R++ + QY +S+ +F +
Sbjct: 144 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QY----TSSTGTKF----------PV 188
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ PE F S ++KSDV+SFG+++ EV S
Sbjct: 189 KWASPEVFSF-SRYSSKSDVWSFGVLMWEVFS 219
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 94/229 (41%), Gaps = 34/229 (14%)
Query: 496 MVETPREISFKEIISATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRL---GMSKCPA 552
MV P E++F Q + FG + G+ N V +K + MS+
Sbjct: 22 MVIDPSELTF------------VQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSE--- 66
Query: 553 LRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSI 612
F E + + +L H LVQL G C EQ + +++++ LS L R +
Sbjct: 67 --DDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-----RTQRGL 119
Query: 613 LQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRN 672
+ + + YL E VIHR++ + + + ++ F + F+
Sbjct: 120 FAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVL-- 174
Query: 673 DHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
D + +T V+ + SPE +S +DV+SFGV++ EV +
Sbjct: 175 DDQYTSSTGTKFPVK----WASPEVFSFSRYSSKSDVWSFGVLMWEVFS 219
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 97/223 (43%), Gaps = 31/223 (13%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRNLVRL 173
+ +G G F KV A G VAVK + + +K F E+ + L H N+V+L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKL 78
Query: 174 RGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHE 233
E L LV +Y + + L A + ++ + R + +A+ Y H+
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVF-------DYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 234 QLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTR 293
+ I+HRD+K N++LD+ N ++ DFG + +E + + +
Sbjct: 132 KF---IVHRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDT------------- 171
Query: 294 IGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
G+ Y PE FQ + DV+S G+++ +VSG D
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 33/182 (18%)
Query: 558 SNELQNLAR-------LRHRNLVQLCGWCTEQGEMLVIYDY-SATRILSHLLFHNNHRIG 609
S+ LQ L R L H N+V+L + + ++ +Y S + +L+ H +
Sbjct: 54 SSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK 113
Query: 610 HSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALA-EF 668
+ ++ + + SA+ Y H+++ ++HR++ + + LD DMN ++ F + EF
Sbjct: 114 EARAKF-------RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF 163
Query: 669 LTRNDHGHRKATSGNR--SVRGIFGYMSPEYIESGEATSM-ADVYSFGVVVLEVVTGQMA 725
T GN+ + G Y +PE + + DV+S GV++ +V+G +
Sbjct: 164 -----------TFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
Query: 726 VD 727
D
Sbjct: 213 FD 214
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 118/261 (45%), Gaps = 33/261 (12%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNL 170
F + E +G G +G VY+A G VVA+K L + E T E+ + L H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
V+L E++L LV++++ ++ L + + + A + K + L L +
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLSF 118
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
H +++HRD+K N++++++ +L DFGLAR +RT + H+
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPVRTYT---HEV---- 164
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII--LLD 348
T+ Y PE + D++S G + E+V+ RRA+ +P D I L
Sbjct: 165 -----VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL---FPGDSEIDQLFR 215
Query: 349 WIRRLSDEGKVLQAGDNRLSD 369
R L +V+ G + D
Sbjct: 216 IFRTLGTPDEVVWPGVTSMPD 236
Score = 30.0 bits (66), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 38/211 (18%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 514 NFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGM-SKCPALRTRFSNELQNLARLRHRN 571
NF + +++ E +G Y+ + V +K++ + ++ + + E+ L L H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 572 LVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILY 631
+V+L + ++ +++++ + + I +++ + + +++ L+ +
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLS----F 118
Query: 632 LHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFG 691
H + +V+HR++ + ++ + G+ LA+F G T + V
Sbjct: 119 CH---SHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYTHEVV--TLW 168
Query: 692 YMSPEYIESGEATSMA-DVYSFGVVVLEVVT 721
Y +PE + + S A D++S G + E+VT
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 30/222 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G FG+V+ + T VA+K L + G + F E + LRH LV+L V
Sbjct: 193 LGQGCFGEVWMGTW-NGTTRVAIKTL-KPGNMSPEAFLQEAQVMKKLRHEKLVQLYA-VV 249
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E+ + +V +YM SL L E L Q + +A+ + Y+
Sbjct: 250 SEEPIYIVTEYMSKGSLLDFL-----KGEMGKYLRLPQLVDMAAQIASGMAYVERM---N 301
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
+HRD++ +N+++ ++ DFGL R +E +Y R + +F I
Sbjct: 302 YVHRDLRAANILVGENLVCKVADFGLGRLIEDN-EYTARQGA----KF----------PI 346
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
+ PE+ G T KSDV+SFGI++ E+ + R + YP
Sbjct: 347 KWTAPEAALYGRF-TIKSDVWSFGILLTELTTKGR---VPYP 384
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 83/196 (42%), Gaps = 16/196 (8%)
Query: 526 FGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEM 585
FG + G + V +K L F E Q + +LRH LVQL +E+
Sbjct: 198 FGEVWMGTWNGTTRVAIKTLKPGNMSP--EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIY 255
Query: 586 LVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNI 645
+V S +L L +G L+ ++ +AS + Y+ +HR++
Sbjct: 256 IVTEYMSKGSLLDFL----KGEMGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 307
Query: 646 TSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATS 705
++ I + ++ ++ F L + N++ R+ + + +PE G T
Sbjct: 308 RAANILVGENLVCKVADFGLGRLIEDNEYTARQG------AKFPIKWTAPEAALYGRFTI 361
Query: 706 MADVYSFGVVVLEVVT 721
+DV+SFG+++ E+ T
Sbjct: 362 KSDVWSFGILLTELTT 377
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 30/222 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G FG+V+ + T VA+K L + G + F E + LRH LV+L V
Sbjct: 23 LGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VV 79
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E+ + +V +YM SL L E L Q + +A+ + Y+
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFL-----KGETGKYLRLPQLVDMSAQIASGMAYVERM---N 131
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
+HRD++ +N+++ ++ DFGLAR +E ++ + +F I
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLARLIEDN-----EWTARQGAKF----------PI 176
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
+ PE+ G T KSDV+SFGI++ E+ + R + YP
Sbjct: 177 KWTAPEAALYGRF-TIKSDVWSFGILLTELTTKGR---VPYP 214
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 83/196 (42%), Gaps = 16/196 (8%)
Query: 526 FGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEM 585
FG + G + V +K L F E Q + +LRH LVQL +E+ +
Sbjct: 28 FGEVWMGTWNGTTRVAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAVVSEE-PI 84
Query: 586 LVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNI 645
++ +Y L L + L+ ++ +AS + Y+ +HR++
Sbjct: 85 YIVTEYMNKGSLLDFLKGETGKY----LRLPQLVDMSAQIASGMAYVE---RMNYVHRDL 137
Query: 646 TSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATS 705
++ I + ++ ++ F LA + N+ R+ + + +PE G T
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDNEWTARQG------AKFPIKWTAPEAALYGRFTI 191
Query: 706 MADVYSFGVVVLEVVT 721
+DV+SFG+++ E+ T
Sbjct: 192 KSDVWSFGILLTELTT 207
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
F + + +G G FG+VY+ + VVA+K + E+ E + E+ ++ +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 172 RLRGWCVHEDQLLLVYDYMPNRS-LDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
R G + +L ++ +Y+ S LD L PL I+R + L Y
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALD---------LLKPGPLEETYIATILREILKGLDY 131
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
LH + + IHRD+K +NV+L Q + +L DFG+A Q+ + + + F
Sbjct: 132 LHSERK---IHRDIKAANVLLSEQGDVKLADFGVAG--------QLTDTQIKRNXF---- 176
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
GT ++ PE K S K+D++S GI +E+ G
Sbjct: 177 ----VGTPFWMAPEVI-KQSAYDFKADIWSLGITAIELAKG 212
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 116/288 (40%), Gaps = 53/288 (18%)
Query: 515 FSESQRVAEMDFGTAYQGFLDNH--QYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNL 572
F++ R+ + FG Y+G +DNH + V +K + + + E+ L++ +
Sbjct: 21 FTKLDRIGKGSFGEVYKG-IDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYI 79
Query: 573 VQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYL 632
+ G + ++ +I +Y LL L+ + I++ + + YL
Sbjct: 80 TRYFGSYLKSTKLWIIMEYLGGGSALDLL-------KPGPLEETYIATILREILKGLDYL 132
Query: 633 HEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGY 692
H +E+ IHR+I ++ + L + +L F +A LT N V F +
Sbjct: 133 H---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ------IKRNXFVGTPF-W 182
Query: 693 MSPEYIESGEATSMADVYSFGVVVLEVVTGQ--------MAVDFRLPEGLLVKRVHEFEA 744
M+PE I+ AD++S G+ +E+ G+ M V F +P+ E
Sbjct: 183 MAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKN----SPPTLEG 238
Query: 745 R-KRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQIL 791
+ +P E V+ AC +P RP+ +++L
Sbjct: 239 QHSKPFKEFVE--------------------ACLNKDPRFRPTAKELL 266
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 30/222 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G FG+V+ + T VA+K L + G + F E + LRH LV+L V
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VV 82
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E+ + +V +YM L L E L Q + +A+ + Y+
Sbjct: 83 SEEPIYIVMEYMSKGCLLDFL-----KGEMGKYLRLPQLVDMAAQIASGMAYVER---MN 134
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
+HRD++ +N+++ ++ DFGLAR +E +Y R + +F I
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDN-EYTARQGA----KF----------PI 179
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
+ PE+ G T KSDV+SFGI++ E+ + R + YP
Sbjct: 180 KWTAPEAALYGRF-TIKSDVWSFGILLTELTTKGR---VPYP 217
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 86/196 (43%), Gaps = 16/196 (8%)
Query: 526 FGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEM 585
FG + G + V +K L F E Q + +LRH LVQL +E+ +
Sbjct: 31 FGEVWMGTWNGTTRVAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAVVSEE-PI 87
Query: 586 LVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNI 645
++ +Y + L L +G L+ ++ +AS + Y+ +HR++
Sbjct: 88 YIVMEYMSKGCLLDFL---KGEMG-KYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 646 TSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATS 705
++ I + ++ ++ F LA + N++ R+ + + +PE G T
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGA------KFPIKWTAPEAALYGRFTI 194
Query: 706 MADVYSFGVVVLEVVT 721
+DV+SFG+++ E+ T
Sbjct: 195 KSDVWSFGILLTELTT 210
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 104/229 (45%), Gaps = 31/229 (13%)
Query: 110 SNGFDEDEVLGSGGFGKVYRAV---LPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLR 166
S+ ++ E+LG GG +V+ A L D V ++ + F F E A L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 167 HRNLVRLRGWCVHEDQL----LLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIR 222
H +V + E +V +Y +D V R + + P+ ++ ++I
Sbjct: 71 HPAIVAVYATGEAETPAGPLPYIVMEY-----VDGVTLR--DIVHTEGPMTPKRAIEVIA 123
Query: 223 GLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSAR 282
AL++ H+ IIHRDVK +N+M+ + ++ DFG+AR +
Sbjct: 124 DACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIA------------- 167
Query: 283 NHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
+ + +T + GT YL PE + SV A+SDV+S G V+ EV++G
Sbjct: 168 DSGNSVTQTAAVIGTAQYLSPEQARGDSV-DARSDVYSLGCVLYEVLTG 215
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 91/213 (42%), Gaps = 23/213 (10%)
Query: 537 HQYVLVK--RLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEM------LVI 588
H+ V VK R +++ P+ RF E QN A L H +V + + T + E ++
Sbjct: 37 HRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV--YATGEAETPAGPLPYIV 94
Query: 589 YDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSS 648
+Y L ++ H G + +I A+ + H+ +IHR++ +
Sbjct: 95 MEYVDGVTLRDIV----HTEGP--MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 145
Query: 649 AITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMAD 708
I + ++ F +A + D G+ + + +V G Y+SPE + +D
Sbjct: 146 NIMISATNAVKVMDFGIARAIA--DSGN--SVTQTAAVIGTAQYLSPEQARGDSVDARSD 201
Query: 709 VYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHE 741
VYS G V+ EV+TG+ P + + V E
Sbjct: 202 VYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 25/212 (11%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G +G+VY V VAVK L E E+ F E + ++H NLV+L G C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E ++ ++M +L L R E A + +I ++A+ YL ++
Sbjct: 326 REPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQI----SSAMEYLEKK---N 377
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
IHR++ N ++ + ++ DFGL+R + + + H I T
Sbjct: 378 FIHRNLAARNCLVGENHLVKVADFGLSRLM-----------TGDTYTAHAGAKFPIKWTA 426
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
PES + KSDV++FG+++ E+ +
Sbjct: 427 ----PESLAYNKFSI-KSDVWAFGVLLWEIAT 453
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 115/267 (43%), Gaps = 32/267 (11%)
Query: 526 FGTAYQGFLDNHQY-VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGE 584
+G Y+G + V VK L F E + ++H NLVQL G CT +
Sbjct: 272 YGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVCTREPP 329
Query: 585 MLVIYDY-SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHR 643
+I ++ + +L +L N + +L + + ++SA+ YL + + IHR
Sbjct: 330 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-----MATQISSAMEYLEK---KNFIHR 381
Query: 644 NITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEA 703
N+ + + + ++ F L+ +T + + + + + + +PE + +
Sbjct: 382 NLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAKFPIKWTAPESLAYNKF 435
Query: 704 TSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNH 763
+ +DV++FGV++ E+ T M+ G+ + +V+ EL++ E
Sbjct: 436 SIKSDVWAFGVLLWEIATYGMSPY----PGIDLSQVY----------ELLEKDYRMERPE 481
Query: 764 KELMRLIKLGIACTLSNPELRPSMRQI 790
++ +L AC NP RPS +I
Sbjct: 482 GCPEKVYELMRACWQWNPSDRPSFAEI 508
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 100/212 (47%), Gaps = 27/212 (12%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
+GSG FG V+ + V A+K + E G E+ F E + L H LV+L G C+
Sbjct: 15 IGSGQFGLVHLGYWLNKDKV-AIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
+ + LV+++M + L L R L AA E + + + YL E
Sbjct: 73 EQAPICLVFEFMEHGCLSDYL-RTQRGLFAA-----ETLLGMCLDVCEGMAYLE---EAS 123
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
+IHRD+ N ++ ++ DFG+ R++ + QY +S+ +F +
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QY----TSSTGTKF----------PV 168
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ PE F S ++KSDV+SFG+++ EV S
Sbjct: 169 KWASPEVFSF-SRYSSKSDVWSFGVLMWEVFS 199
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 22/206 (10%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRL---GMSKCPALRTRFSNELQNLARLRHRNLVQL 575
Q + FG + G+ N V +K + MS+ F E + + +L H LVQL
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-----EDFIEEAEVMMKLSHPKLVQL 67
Query: 576 CGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEE 635
G C EQ + +++++ LS L R + + + + YL E
Sbjct: 68 YGVCLEQAPICLVFEFMEHGCLSDYL-----RTQRGLFAAETLLGMCLDVCEGMAYLEE- 121
Query: 636 WNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSP 695
VIHR++ + + + ++ F + F+ D + +T V+ + SP
Sbjct: 122 --ASVIHRDLAARNCLVGENQVIKVSDFGMTRFVL--DDQYTSSTGTKFPVK----WASP 173
Query: 696 EYIESGEATSMADVYSFGVVVLEVVT 721
E +S +DV+SFGV++ EV +
Sbjct: 174 EVFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 97/223 (43%), Gaps = 31/223 (13%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRNLVRL 173
+ +G G F KV A G VAVK + + +K F E+ + L H N+V+L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKL 78
Query: 174 RGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHE 233
E L LV +Y + + L A + ++ + R + +A+ Y H+
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVF-------DYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 234 QLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTR 293
+ I+HRD+K N++LD+ N ++ DFG + +E + + +
Sbjct: 132 KF---IVHRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDT------------- 171
Query: 294 IGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
G+ Y PE FQ + DV+S G+++ +VSG D
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 33/182 (18%)
Query: 558 SNELQNLAR-------LRHRNLVQLCGWCTEQGEMLVIYDY-SATRILSHLLFHNNHRIG 609
S+ LQ L R L H N+V+L + + ++ +Y S + +L+ H +
Sbjct: 54 SSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK 113
Query: 610 HSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALA-EF 668
+ ++ + + SA+ Y H+++ ++HR++ + + LD DMN ++ F + EF
Sbjct: 114 EARAKF-------RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF 163
Query: 669 LTRNDHGHRKATSGNR--SVRGIFGYMSPEYIESGEATSM-ADVYSFGVVVLEVVTGQMA 725
T GN+ + G Y +PE + + DV+S GV++ +V+G +
Sbjct: 164 -----------TFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
Query: 726 VD 727
D
Sbjct: 213 FD 214
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 118/261 (45%), Gaps = 33/261 (12%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNL 170
F + E +G G +G VY+A G VVA+K L + E T E+ + L H N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
V+L E++L LV++++ ++ L + + + A + K + L L +
Sbjct: 72 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
H +++HRD+K N++++++ +L DFGLAR +RT + H+
Sbjct: 126 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPVRTYT---HEV---- 171
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII--LLD 348
T+ Y PE + D++S G + E+V+ RRA+ +P D I L
Sbjct: 172 -----VTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT-RRAL---FPGDSEIDQLFR 222
Query: 349 WIRRLSDEGKVLQAGDNRLSD 369
R L +V+ G + D
Sbjct: 223 IFRTLGTPDEVVWPGVTSMPD 243
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 514 NFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGM-SKCPALRTRFSNELQNLARLRHRN 571
NF + +++ E +G Y+ + V +K++ + ++ + + E+ L L H N
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 572 LVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILY 631
+V+L + ++ +++++ + + I +++ + + +++ LA +
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA----F 125
Query: 632 LHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFG 691
H + +V+HR++ + ++ + G+ LA+F G T + V
Sbjct: 126 CH---SHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYTHEVV--TLW 175
Query: 692 YMSPEYIESGEATSMA-DVYSFGVVVLEVVT 721
Y +PE + + S A D++S G + E+VT
Sbjct: 176 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVT 206
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 100/212 (47%), Gaps = 27/212 (12%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
+GSG FG V+ + V A+K + E G E+ F E + L H LV+L G C+
Sbjct: 18 IGSGQFGLVHLGYWLNKDKV-AIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 75
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
+ + LV+++M + L L R L AA L + + + YL E
Sbjct: 76 EQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC--- 126
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
+IHRD+ N ++ ++ DFG+ R++ + QY +S+ +F +
Sbjct: 127 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QY----TSSTGTKF----------PV 171
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ PE F S ++KSDV+SFG+++ EV S
Sbjct: 172 KWASPEVFSF-SRYSSKSDVWSFGVLMWEVFS 202
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 22/206 (10%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRL---GMSKCPALRTRFSNELQNLARLRHRNLVQL 575
Q + FG + G+ N V +K + MS+ F E + + +L H LVQL
Sbjct: 16 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-----EDFIEEAEVMMKLSHPKLVQL 70
Query: 576 CGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEE 635
G C EQ + +++++ LS L R + + + + YL E
Sbjct: 71 YGVCLEQAPICLVFEFMEHGCLSDYL-----RTQRGLFAAETLLGMCLDVCEGMAYLEE- 124
Query: 636 WNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSP 695
VIHR++ + + + ++ F + F+ D + +T V+ + SP
Sbjct: 125 --ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVL--DDQYTSSTGTKFPVK----WASP 176
Query: 696 EYIESGEATSMADVYSFGVVVLEVVT 721
E +S +DV+SFGV++ EV +
Sbjct: 177 EVFSFSRYSSKSDVWSFGVLMWEVFS 202
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 100/212 (47%), Gaps = 27/212 (12%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
+GSG FG V+ + V A+K + E G E+ F E + L H LV+L G C+
Sbjct: 13 IGSGQFGLVHLGYWLNKDKV-AIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
+ + LV+++M + L L R L AA L + + + YL E
Sbjct: 71 EQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC--- 121
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
+IHRD+ N ++ ++ DFG+ R++ + QY +S+ +F +
Sbjct: 122 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QY----TSSTGTKF----------PV 166
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ PE F S ++KSDV+SFG+++ EV S
Sbjct: 167 KWASPEVF-SFSRYSSKSDVWSFGVLMWEVFS 197
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 22/206 (10%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRL---GMSKCPALRTRFSNELQNLARLRHRNLVQL 575
Q + FG + G+ N V +K + MS+ F E + + +L H LVQL
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-----EDFIEEAEVMMKLSHPKLVQL 65
Query: 576 CGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEE 635
G C EQ + +++++ LS L R + + + + YL E
Sbjct: 66 YGVCLEQAPICLVFEFMEHGCLSDYL-----RTQRGLFAAETLLGMCLDVCEGMAYLEE- 119
Query: 636 WNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSP 695
VIHR++ + + + ++ F + F+ D + +T V+ + SP
Sbjct: 120 --ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVL--DDQYTSSTGTKFPVK----WASP 171
Query: 696 EYIESGEATSMADVYSFGVVVLEVVT 721
E +S +DV+SFGV++ EV +
Sbjct: 172 EVFSFSRYSSKSDVWSFGVLMWEVFS 197
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 100/212 (47%), Gaps = 27/212 (12%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
+GSG FG V+ + V A+K + E G E+ F E + L H LV+L G C+
Sbjct: 15 IGSGQFGLVHLGYWLNKDKV-AIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
+ + LV+++M + L L R L AA L + + + YL E
Sbjct: 73 EQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC--- 123
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
+IHRD+ N ++ ++ DFG+ R++ + QY +S+ +F +
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QY----TSSTGTKF----------PV 168
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ PE F S ++KSDV+SFG+++ EV S
Sbjct: 169 KWASPEVF-SFSRYSSKSDVWSFGVLMWEVFS 199
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 22/206 (10%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRL---GMSKCPALRTRFSNELQNLARLRHRNLVQL 575
Q + FG + G+ N V +K + MS+ F E + + +L H LVQL
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-----EDFIEEAEVMMKLSHPKLVQL 67
Query: 576 CGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEE 635
G C EQ + +++++ LS L R + + + + YL E
Sbjct: 68 YGVCLEQAPICLVFEFMEHGCLSDYL-----RTQRGLFAAETLLGMCLDVCEGMAYLEE- 121
Query: 636 WNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSP 695
VIHR++ + + + ++ F + F+ D + +T V+ + SP
Sbjct: 122 --ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVL--DDQYTSSTGTKFPVK----WASP 173
Query: 696 EYIESGEATSMADVYSFGVVVLEVVT 721
E +S +DV+SFGV++ EV +
Sbjct: 174 EVFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 118/261 (45%), Gaps = 33/261 (12%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNL 170
F + E +G G +G VY+A G VVA+K L + E T E+ + L H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
V+L E++L LV++++ ++ L + + + A + K + L L +
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
H +++HRD+K N++++++ +L DFGLAR +RT + H+
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPVRTYT---HEV---- 164
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII--LLD 348
T+ Y PE + D++S G + E+V+ RRA+ +P D I L
Sbjct: 165 -----VTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT-RRAL---FPGDSEIDQLFR 215
Query: 349 WIRRLSDEGKVLQAGDNRLSD 369
R L +V+ G + D
Sbjct: 216 IFRTLGTPDEVVWPGVTSMPD 236
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 514 NFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGM-SKCPALRTRFSNELQNLARLRHRN 571
NF + +++ E +G Y+ + V +K++ + ++ + + E+ L L H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 572 LVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILY 631
+V+L + ++ +++++ + + I +++ + + +++ LA +
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA----F 118
Query: 632 LHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFG 691
H + +V+HR++ + ++ + G+ LA+F G T + V
Sbjct: 119 CH---SHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYTHEVV--TLW 168
Query: 692 YMSPEYIESGEATSMA-DVYSFGVVVLEVVT 721
Y +PE + + S A D++S G + E+VT
Sbjct: 169 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 106/231 (45%), Gaps = 30/231 (12%)
Query: 116 DEVLGSGGFGKVYRA-VLPSDGTVV--AVKCLAEKGERFEKT-FAAELVAVAHLRHRNLV 171
+EV+G G FG VY +L +DG + AVK L + E + F E + + H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 172 RLRGWCVH-EDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
L G C+ E L+V YM + L + N + + + +A + +
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKF 146
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
L + + +HRD+ N MLD ++ ++ DFGLAR + Y S N
Sbjct: 147 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDM-----YDKEFDSVHN------- 191
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPD 341
T + ++ ES Q T KSDV+SFG+++ E+++ R A YPD
Sbjct: 192 KTGAKLPVKWMALESLQTQKF-TTKSDVWSFGVLLWELMT-RGAP--PYPD 238
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 89/209 (42%), Gaps = 32/209 (15%)
Query: 526 FGTAYQG-FLDNHQ---YVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCT- 580
FG Y G LDN + VK L ++F E + H N++ L G C
Sbjct: 41 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 100
Query: 581 EQGEMLVIYDYSATRILSHLLFHNNHR------IGHSILQWHHRYNIIKSLASAILYLHE 634
+G LV+ Y L + + + H IG + +A + +L
Sbjct: 101 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-----------QVAKGMKFLA- 148
Query: 635 EWNEQVIHRNITSSAITLDPDMNPRLGSFALAE--FLTRNDHGHRKATSGNRSVRGIFGY 692
+++ +HR++ + LD ++ F LA + D H K T V+ +
Sbjct: 149 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK-TGAKLPVK----W 201
Query: 693 MSPEYIESGEATSMADVYSFGVVVLEVVT 721
M+ E +++ + T+ +DV+SFGV++ E++T
Sbjct: 202 MALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 118/261 (45%), Gaps = 33/261 (12%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNL 170
F + E +G G +G VY+A G VVA+K L + E T E+ + L H N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
V+L E++L LV++++ ++ L + + + A + K + L L +
Sbjct: 72 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
H +++HRD+K N++++++ +L DFGLAR +RT + H+
Sbjct: 126 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPVRTYT---HEV---- 171
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII--LLD 348
T+ Y PE + D++S G + E+V+ RRA+ +P D I L
Sbjct: 172 -----VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL---FPGDSEIDQLFR 222
Query: 349 WIRRLSDEGKVLQAGDNRLSD 369
R L +V+ G + D
Sbjct: 223 IFRTLGTPDEVVWPGVTSMPD 243
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 514 NFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGM-SKCPALRTRFSNELQNLARLRHRN 571
NF + +++ E +G Y+ + V +K++ + ++ + + E+ L L H N
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 572 LVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILY 631
+V+L + ++ +++++ + + I +++ + + +++ LA +
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA----F 125
Query: 632 LHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFG 691
H + +V+HR++ + ++ + G+ LA+F G T + V
Sbjct: 126 CH---SHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYTHEVV--TLW 175
Query: 692 YMSPEYIESGEATSMA-DVYSFGVVVLEVVT 721
Y +PE + + S A D++S G + E+VT
Sbjct: 176 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 206
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 118/261 (45%), Gaps = 33/261 (12%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNL 170
F + E +G G +G VY+A G VVA+K L + E T E+ + L H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
V+L E++L LV++++ ++ L + + + A + K + L L +
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
H +++HRD+K N++++++ +L DFGLAR +RT + H+
Sbjct: 120 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPVRTYT---HEV---- 165
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII--LLD 348
T+ Y PE + D++S G + E+V+ RRA+ +P D I L
Sbjct: 166 -----VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL---FPGDSEIDQLFR 216
Query: 349 WIRRLSDEGKVLQAGDNRLSD 369
R L +V+ G + D
Sbjct: 217 IFRTLGTPDEVVWPGVTSMPD 237
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 39/214 (18%), Positives = 96/214 (44%), Gaps = 18/214 (8%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGM-SKCPALRTRFSNELQNLARLR 568
+ NF + +++ E +G Y+ + V +K++ + ++ + + E+ L L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 569 HRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASA 628
H N+V+L + ++ +++++ + + I +++ + + +++ LA
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA-- 118
Query: 629 ILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRG 688
+ H + +V+HR++ + ++ + G+ LA+F G T + V
Sbjct: 119 --FCH---SHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYTHEVV-- 166
Query: 689 IFGYMSPEYIESGEATSMA-DVYSFGVVVLEVVT 721
Y +PE + + S A D++S G + E+VT
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 106/231 (45%), Gaps = 30/231 (12%)
Query: 116 DEVLGSGGFGKVYRA-VLPSDGTVV--AVKCLAEKGERFEKT-FAAELVAVAHLRHRNLV 171
+EV+G G FG VY +L +DG + AVK L + E + F E + + H N++
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 172 RLRGWCVH-EDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
L G C+ E L+V YM + L + N + + + +A + +
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKF 153
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
L + + +HRD+ N MLD ++ ++ DFGLAR + Y S N
Sbjct: 154 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDM-----YDKEFDSVHN------- 198
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPD 341
T + ++ ES Q T KSDV+SFG+++ E+++ R A YPD
Sbjct: 199 KTGAKLPVKWMALESLQTQKF-TTKSDVWSFGVLLWELMT-RGAP--PYPD 245
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 89/209 (42%), Gaps = 32/209 (15%)
Query: 526 FGTAYQG-FLDNHQ---YVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCT- 580
FG Y G LDN + VK L ++F E + H N++ L G C
Sbjct: 48 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 107
Query: 581 EQGEMLVIYDYSATRILSHLLFHNNHR------IGHSILQWHHRYNIIKSLASAILYLHE 634
+G LV+ Y L + + + H IG + +A + +L
Sbjct: 108 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-----------QVAKGMKFLA- 155
Query: 635 EWNEQVIHRNITSSAITLDPDMNPRLGSFALAE--FLTRNDHGHRKATSGNRSVRGIFGY 692
+++ +HR++ + LD ++ F LA + D H K T V+ +
Sbjct: 156 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK-TGAKLPVK----W 208
Query: 693 MSPEYIESGEATSMADVYSFGVVVLEVVT 721
M+ E +++ + T+ +DV+SFGV++ E++T
Sbjct: 209 MALESLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 119/266 (44%), Gaps = 33/266 (12%)
Query: 108 IGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHL 165
+ F + E +G G +G VY+A G VVA+K L + E T E+ + L
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 166 RHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLA 225
H N+V+L E++L LV++++ ++ L + + + A + K + L
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLL 117
Query: 226 AALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQ 285
L + H +++HRD+K N++++++ +L DFGLAR +RT + H+
Sbjct: 118 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPVRTYT---HE 167
Query: 286 FHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII 345
T+ Y PE + D++S G + E+V+ RRA+ +P D I
Sbjct: 168 V---------VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL---FPGDSEI 214
Query: 346 --LLDWIRRLSDEGKVLQAGDNRLSD 369
L R L +V+ G + D
Sbjct: 215 DQLFRIFRTLGTPDEVVWPGVTSMPD 240
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 514 NFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGM-SKCPALRTRFSNELQNLARLRHRN 571
NF + +++ E +G Y+ + V +K++ + ++ + + E+ L L H N
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 572 LVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILY 631
+V+L + ++ +++++ + + I +++ + + +++ LA +
Sbjct: 68 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA----F 122
Query: 632 LHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFG 691
H + +V+HR++ + ++ + G+ LA+F G T + V
Sbjct: 123 CH---SHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYTHEVV--TLW 172
Query: 692 YMSPEYIESGEATSMA-DVYSFGVVVLEVVT 721
Y +PE + + S A D++S G + E+VT
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 106/231 (45%), Gaps = 30/231 (12%)
Query: 116 DEVLGSGGFGKVYRA-VLPSDGTVV--AVKCLAEKGERFEKT-FAAELVAVAHLRHRNLV 171
+EV+G G FG VY +L +DG + AVK L + E + F E + + H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 172 RLRGWCVH-EDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
L G C+ E L+V YM + L + N + + + +A + +
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKF 149
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
L + + +HRD+ N MLD ++ ++ DFGLAR + Y S N
Sbjct: 150 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDM-----YDKEFDSVHN------- 194
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPD 341
T + ++ ES Q T KSDV+SFG+++ E+++ R A YPD
Sbjct: 195 KTGAKLPVKWMALESLQTQKF-TTKSDVWSFGVLLWELMT-RGAP--PYPD 241
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 89/209 (42%), Gaps = 32/209 (15%)
Query: 526 FGTAYQG-FLDNHQ---YVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCT- 580
FG Y G LDN + VK L ++F E + H N++ L G C
Sbjct: 44 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 103
Query: 581 EQGEMLVIYDYSATRILSHLLFHNNHR------IGHSILQWHHRYNIIKSLASAILYLHE 634
+G LV+ Y L + + + H IG + +A + +L
Sbjct: 104 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-----------QVAKGMKFLA- 151
Query: 635 EWNEQVIHRNITSSAITLDPDMNPRLGSFALAE--FLTRNDHGHRKATSGNRSVRGIFGY 692
+++ +HR++ + LD ++ F LA + D H K T V+ +
Sbjct: 152 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK-TGAKLPVK----W 204
Query: 693 MSPEYIESGEATSMADVYSFGVVVLEVVT 721
M+ E +++ + T+ +DV+SFGV++ E++T
Sbjct: 205 MALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 106/231 (45%), Gaps = 30/231 (12%)
Query: 116 DEVLGSGGFGKVYRA-VLPSDGTVV--AVKCLAEKGERFEKT-FAAELVAVAHLRHRNLV 171
+EV+G G FG VY +L +DG + AVK L + E + F E + + H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 172 RLRGWCVH-EDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
L G C+ E L+V YM + L + N + + + +A + +
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKF 148
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
L + + +HRD+ N MLD ++ ++ DFGLAR + Y S N
Sbjct: 149 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDM-----YDKEFDSVHN------- 193
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPD 341
T + ++ ES Q T KSDV+SFG+++ E+++ R A YPD
Sbjct: 194 KTGAKLPVKWMALESLQTQKF-TTKSDVWSFGVLLWELMT-RGAP--PYPD 240
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 89/209 (42%), Gaps = 32/209 (15%)
Query: 526 FGTAYQG-FLDNHQ---YVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCT- 580
FG Y G LDN + VK L ++F E + H N++ L G C
Sbjct: 43 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 102
Query: 581 EQGEMLVIYDYSATRILSHLLFHNNHR------IGHSILQWHHRYNIIKSLASAILYLHE 634
+G LV+ Y L + + + H IG + +A + +L
Sbjct: 103 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-----------QVAKGMKFLA- 150
Query: 635 EWNEQVIHRNITSSAITLDPDMNPRLGSFALAE--FLTRNDHGHRKATSGNRSVRGIFGY 692
+++ +HR++ + LD ++ F LA + D H K T V+ +
Sbjct: 151 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK-TGAKLPVK----W 203
Query: 693 MSPEYIESGEATSMADVYSFGVVVLEVVT 721
M+ E +++ + T+ +DV+SFGV++ E++T
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 30/222 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
LG G FG+V+ + T VA+K L + G + F E + LRH LV+L V
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VV 82
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
E+ + +V +YM L L E L Q + +A+ + Y+
Sbjct: 83 SEEPIYIVTEYMSKGCLLDFL-----KGEMGKYLRLPQLVDMAAQIASGMAYVERM---N 134
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
+HRD++ +N+++ ++ DFGLAR +E +Y R + +F I
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDN-EYTARQGA----KF----------PI 179
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
+ PE+ G T KSDV+SFGI++ E+ + R + YP
Sbjct: 180 KWTAPEAALYGRF-TIKSDVWSFGILLTELTTKGR---VPYP 217
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 86/196 (43%), Gaps = 16/196 (8%)
Query: 526 FGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEM 585
FG + G + V +K L F E Q + +LRH LVQL +E+ +
Sbjct: 31 FGEVWMGTWNGTTRVAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAVVSEE-PI 87
Query: 586 LVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNI 645
++ +Y + L L +G L+ ++ +AS + Y+ +HR++
Sbjct: 88 YIVTEYMSKGCLLDFL---KGEMG-KYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 646 TSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATS 705
++ I + ++ ++ F LA + N++ R+ + + +PE G T
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGA------KFPIKWTAPEAALYGRFTI 194
Query: 706 MADVYSFGVVVLEVVT 721
+DV+SFG+++ E+ T
Sbjct: 195 KSDVWSFGILLTELTT 210
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 118/261 (45%), Gaps = 33/261 (12%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNL 170
F + E +G G +G VY+A G VVA+K L + E T E+ + L H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
V+L E++L LV++++ ++ L + + + A + K + L L +
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
H +++HRD+K N++++++ +L DFGLAR +RT + H+
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPVRTYT---HEV---- 163
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII--LLD 348
T+ Y PE + D++S G + E+V+ RRA+ +P D I L
Sbjct: 164 -----VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL---FPGDSEIDQLFR 214
Query: 349 WIRRLSDEGKVLQAGDNRLSD 369
R L +V+ G + D
Sbjct: 215 IFRTLGTPDEVVWPGVTSMPD 235
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 514 NFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGM-SKCPALRTRFSNELQNLARLRHRN 571
NF + +++ E +G Y+ + V +K++ + ++ + + E+ L L H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 572 LVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILY 631
+V+L + ++ +++++ + + I +++ + + +++ LA +
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA----F 117
Query: 632 LHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFG 691
H + +V+HR++ + ++ + G+ LA+F G T + V
Sbjct: 118 CH---SHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYTHEVV--TLW 167
Query: 692 YMSPEYIESGEATSMA-DVYSFGVVVLEVVT 721
Y +PE + + S A D++S G + E+VT
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 106/231 (45%), Gaps = 30/231 (12%)
Query: 116 DEVLGSGGFGKVYRA-VLPSDGTVV--AVKCLAEKGERFEKT-FAAELVAVAHLRHRNLV 171
+EV+G G FG VY +L +DG + AVK L + E + F E + + H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 172 RLRGWCVH-EDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
L G C+ E L+V YM + L + N + + + +A + +
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKF 148
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
L + + +HRD+ N MLD ++ ++ DFGLAR + Y S N
Sbjct: 149 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDM-----YDKEFDSVHN------- 193
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPD 341
T + ++ ES Q T KSDV+SFG+++ E+++ R A YPD
Sbjct: 194 KTGAKLPVKWMALESLQTQKF-TTKSDVWSFGVLLWELMT-RGAP--PYPD 240
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 89/209 (42%), Gaps = 32/209 (15%)
Query: 526 FGTAYQG-FLDNHQ---YVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCT- 580
FG Y G LDN + VK L ++F E + H N++ L G C
Sbjct: 43 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 102
Query: 581 EQGEMLVIYDYSATRILSHLLFHNNHR------IGHSILQWHHRYNIIKSLASAILYLHE 634
+G LV+ Y L + + + H IG + +A + +L
Sbjct: 103 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-----------QVAKGMKFLA- 150
Query: 635 EWNEQVIHRNITSSAITLDPDMNPRLGSFALAE--FLTRNDHGHRKATSGNRSVRGIFGY 692
+++ +HR++ + LD ++ F LA + D H K T V+ +
Sbjct: 151 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK-TGAKLPVK----W 203
Query: 693 MSPEYIESGEATSMADVYSFGVVVLEVVT 721
M+ E +++ + T+ +DV+SFGV++ E++T
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 118/261 (45%), Gaps = 33/261 (12%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNL 170
F + E +G G +G VY+A G VVA+K L + E T E+ + L H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
V+L E++L LV++++ ++ L + + + A + K + L L +
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
H +++HRD+K N++++++ +L DFGLAR +RT + H+
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPVRTYT---HEV---- 164
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII--LLD 348
T+ Y PE + D++S G + E+V+ RRA+ +P D I L
Sbjct: 165 -----VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL---FPGDSEIDQLFR 215
Query: 349 WIRRLSDEGKVLQAGDNRLSD 369
R L +V+ G + D
Sbjct: 216 IFRTLGTPDEVVWPGVTSMPD 236
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 514 NFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGM-SKCPALRTRFSNELQNLARLRHRN 571
NF + +++ E +G Y+ + V +K++ + ++ + + E+ L L H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 572 LVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILY 631
+V+L + ++ +++++ + + I +++ + + +++ LA +
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA----F 118
Query: 632 LHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFG 691
H + +V+HR++ + ++ + G+ LA+F G T + V
Sbjct: 119 CH---SHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYTHEVV--TLW 168
Query: 692 YMSPEYIESGEATSMA-DVYSFGVVVLEVVT 721
Y +PE + + S A D++S G + E+VT
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 106/231 (45%), Gaps = 30/231 (12%)
Query: 116 DEVLGSGGFGKVYRA-VLPSDGTVV--AVKCLAEKGERFEKT-FAAELVAVAHLRHRNLV 171
+EV+G G FG VY +L +DG + AVK L + E + F E + + H N++
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 172 RLRGWCVH-EDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
L G C+ E L+V YM + L + N + + + +A + +
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKF 207
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
L + + +HRD+ N MLD ++ ++ DFGLAR + Y S N
Sbjct: 208 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDM-----YDKEFDSVHN------- 252
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPD 341
T + ++ ES Q T KSDV+SFG+++ E+++ R A YPD
Sbjct: 253 KTGAKLPVKWMALESLQTQKF-TTKSDVWSFGVLLWELMT-RGAP--PYPD 299
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 89/209 (42%), Gaps = 32/209 (15%)
Query: 526 FGTAYQG-FLDNHQ---YVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCT- 580
FG Y G LDN + VK L ++F E + H N++ L G C
Sbjct: 102 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 161
Query: 581 EQGEMLVIYDYSATRILSHLLFHNNHR------IGHSILQWHHRYNIIKSLASAILYLHE 634
+G LV+ Y L + + + H IG + +A + +L
Sbjct: 162 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-----------QVAKGMKFLA- 209
Query: 635 EWNEQVIHRNITSSAITLDPDMNPRLGSFALAE--FLTRNDHGHRKATSGNRSVRGIFGY 692
+++ +HR++ + LD ++ F LA + D H K T V+ +
Sbjct: 210 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK-TGAKLPVK----W 262
Query: 693 MSPEYIESGEATSMADVYSFGVVVLEVVT 721
M+ E +++ + T+ +DV+SFGV++ E++T
Sbjct: 263 MALESLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 118/261 (45%), Gaps = 33/261 (12%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNL 170
F + E +G G +G VY+A G VVA+K L + E T E+ + L H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
V+L E++L LV++++ ++ L + + + A + K + L L +
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
H +++HRD+K N++++++ +L DFGLAR +RT + H+
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPVRTYT---HEV---- 163
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII--LLD 348
T+ Y PE + D++S G + E+V+ RRA+ +P D I L
Sbjct: 164 -----VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL---FPGDSEIDQLFR 214
Query: 349 WIRRLSDEGKVLQAGDNRLSD 369
R L +V+ G + D
Sbjct: 215 IFRTLGTPDEVVWPGVTSMPD 235
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 514 NFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGM-SKCPALRTRFSNELQNLARLRHRN 571
NF + +++ E +G Y+ + V +K++ + ++ + + E+ L L H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 572 LVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILY 631
+V+L + ++ +++++ + + I +++ + + +++ LA +
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA----F 117
Query: 632 LHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFG 691
H + +V+HR++ + ++ + G+ LA+F G T + V
Sbjct: 118 CH---SHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYTHEVV--TLW 167
Query: 692 YMSPEYIESGEATSMA-DVYSFGVVVLEVVT 721
Y +PE + + S A D++S G + E+VT
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 49/284 (17%)
Query: 519 QRVAEMDFGTA--YQGFLDNHQYVLVKRLGMSKCPAL-RTRFSNELQNLARLRHRNLVQL 575
Q++ E FG A + D QYV +K + +S+ + R E+ LA ++H N+VQ
Sbjct: 30 QKIGEGSFGKAILVKSTEDGRQYV-IKEINISRMSSKEREESRREVAVLANMKHPNIVQY 88
Query: 576 CGWCTEQGEMLVIYDYSA-----TRILSH--LLFHNNHRIGHSILQWHHRYNIIKSLASA 628
E G + ++ DY RI + +LF + IL W + + A
Sbjct: 89 RESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQ-----ILDWFVQ------ICLA 137
Query: 629 ILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRG 688
+ ++H+ +++HR+I S I L D +LG F +A L R+ G
Sbjct: 138 LKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLN-------STVELARACIG 187
Query: 689 IFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRP 748
Y+SPE E+ + +D+++ G V+ E+ T + A + + L++K +
Sbjct: 188 TPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIIS-------- 239
Query: 749 LAELVDLSLNGEYNHKELM-RLIKLGIACTLSNPELRPSMRQIL 791
+SL+ Y+ + L+ +L K NP RPS+ IL
Sbjct: 240 -GSFPPVSLHYSYDLRSLVSQLFK-------RNPRDRPSVNSIL 275
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 27/220 (12%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVK--CLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
+G G FGK DG +K ++ + + E+ +A+++H N+V+ R
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 177 CVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLE 236
L +V DY L F+R N + +Q + AL ++H++
Sbjct: 92 FEENGSLYIVMDYCEGGDL----FKRI-NAQKGVLFQEDQILDWFVQICLALKHVHDR-- 144
Query: 237 TQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGG 296
+I+HRD+K+ N+ L +LGDFG+AR L N LA G
Sbjct: 145 -KILHRDIKSQNIFLTKDGTVQLGDFGIARVL--------------NSTVELARACI--G 187
Query: 297 TIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
T YL PE + KSD+++ G V+ E+ + + A +
Sbjct: 188 TPYYLSPEICENKPY-NNKSDIWALGCVLYELCTLKHAFE 226
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 23/225 (10%)
Query: 110 SNGFDEDEVLGSGGFGKVYRAV---LPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLR 166
S+ ++ E+LG GG +V+ A L D V ++ + F F E A L
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 167 HRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAA 226
H +V + E + Y+ +D V R + + P+ ++ ++I
Sbjct: 88 HPAIVAVYDTGEAETPAGPL-PYIVMEYVDGVTLR--DIVHTEGPMTPKRAIEVIADACQ 144
Query: 227 ALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQF 286
AL++ H+ IIHRDVK +N+M+ + ++ DFG+AR + +
Sbjct: 145 ALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIA-------------DSGN 188
Query: 287 HLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
+ +T + GT YL PE + SV A+SDV+S G V+ EV++G
Sbjct: 189 SVTQTAAVIGTAQYLSPEQARGDSV-DARSDVYSLGCVLYEVLTG 232
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 23/213 (10%)
Query: 537 HQYVLVK--RLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEM------LVI 588
H+ V VK R +++ P+ RF E QN A L H +V + + T + E ++
Sbjct: 54 HRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV--YDTGEAETPAGPLPYIV 111
Query: 589 YDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSS 648
+Y L ++ H G + I+ +A A L+ +IHR++ +
Sbjct: 112 MEYVDGVTLRDIV----HTEGPMTPK-----RAIEVIADACQALNFSHQNGIIHRDVKPA 162
Query: 649 AITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMAD 708
I + ++ F +A + D G+ + + +V G Y+SPE + +D
Sbjct: 163 NIMISATNAVKVMDFGIARAIA--DSGN--SVTQTAAVIGTAQYLSPEQARGDSVDARSD 218
Query: 709 VYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHE 741
VYS G V+ EV+TG+ P + + V E
Sbjct: 219 VYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 251
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 109/230 (47%), Gaps = 36/230 (15%)
Query: 119 LGSGGFGKVYRAVL-------PSDGTVVAVKCLAEKGERFEKTFAAELVAVAHL-----R 166
LG G FG+V A P+ T VAVK L K + EK + +L++ + +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLS-DLISEMEMMKMIGK 92
Query: 167 HRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVL-FRRPENLEAA-APLNWEQRKKIIRGL 224
H+N++ L G C + L ++ +Y +L L R P LE + P + + + + L
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 225 AAALHYLHEQLE----TQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSS 280
+ + + +E + IHRD+ NV++ ++ DFGLAR + H + Y +T++
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-HHIDYYKKTTN 211
Query: 281 ARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
R + ++ PE+ + T +SDV+SFG+++ E+ +
Sbjct: 212 GRL-------------PVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFT 247
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 109/238 (45%), Gaps = 32/238 (13%)
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLL-------FHNNHRIGHSILQWHHRYN 620
+H+N++ L G CT+ G + VI +Y++ L L ++ H+ + +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 621 IIK---SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHR 677
++ +A + YL +++ IHR++ + + + D ++ F LA + D+ ++
Sbjct: 152 LVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY-YK 207
Query: 678 KATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVK 737
K T+G V+ +M+PE + T +DV+SFGV++ E+ T + +P L K
Sbjct: 208 KTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 263
Query: 738 RVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
+ E +P +L + +MR C + P RP+ +Q++ LD
Sbjct: 264 LLKEGHRMDKPSNCTNELYM--------MMR------DCWHAVPSQRPTFKQLVEDLD 307
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 107/232 (46%), Gaps = 32/232 (13%)
Query: 116 DEVLGSGGFGKVYRA-VLPSDGTVV--AVKCLAEKGERFEKT-FAAELVAVAHLRHRNLV 171
+EV+G G FG VY +L +DG + AVK L + E + F E + + H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 172 RLRGWCVH-EDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
L G C+ E L+V YM + L + N + + + +A + +
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKF 149
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR-WLEHELQYQMRTSSARNHQFHLA 289
L + + +HRD+ N MLD ++ ++ DFGLAR L+ E + A+
Sbjct: 150 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKL------ 200
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPD 341
+ ++ ES Q T KSDV+SFG+++ E+++ R A YPD
Sbjct: 201 -------PVKWMALESLQTQKF-TTKSDVWSFGVLLWELMT-RGAP--PYPD 241
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 88/208 (42%), Gaps = 30/208 (14%)
Query: 526 FGTAYQG-FLDNHQ---YVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCT- 580
FG Y G LDN + VK L ++F E + H N++ L G C
Sbjct: 44 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 103
Query: 581 EQGEMLVIYDYSATRILSHLLFHNNHR------IGHSILQWHHRYNIIKSLASAILYLHE 634
+G LV+ Y L + + + H IG + +A + +L
Sbjct: 104 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-----------QVAKGMKFLA- 151
Query: 635 EWNEQVIHRNITSSAITLDPDMNPRLGSFALA-EFLTRNDHGHRKATSGNRSVRGIFGYM 693
+++ +HR++ + LD ++ F LA + L + T V+ +M
Sbjct: 152 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVK----WM 205
Query: 694 SPEYIESGEATSMADVYSFGVVVLEVVT 721
+ E +++ + T+ +DV+SFGV++ E++T
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 104/229 (45%), Gaps = 31/229 (13%)
Query: 110 SNGFDEDEVLGSGGFGKVYRAV---LPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLR 166
S+ ++ E+LG GG +V+ A L D V ++ + F F E A L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 167 HRNLVRLRGWCVHEDQL----LLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIR 222
H +V + E +V +Y +D V R + + P+ ++ ++I
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEY-----VDGVTLR--DIVHTEGPMTPKRAIEVIA 123
Query: 223 GLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSAR 282
AL++ H+ IIHRDVK +N+M+ + ++ DFG+AR +
Sbjct: 124 DACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIA------------- 167
Query: 283 NHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
+ + +T + GT YL PE + SV A+SDV+S G V+ EV++G
Sbjct: 168 DSGNSVTQTAAVIGTAQYLSPEQARGDSV-DARSDVYSLGCVLYEVLTG 215
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 91/213 (42%), Gaps = 23/213 (10%)
Query: 537 HQYVLVK--RLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEM------LVI 588
H+ V VK R +++ P+ RF E QN A L H +V + + T + E ++
Sbjct: 37 HRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV--YDTGEAETPAGPLPYIV 94
Query: 589 YDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSS 648
+Y L ++ H G + +I A+ + H+ +IHR++ +
Sbjct: 95 MEYVDGVTLRDIV----HTEGP--MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 145
Query: 649 AITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMAD 708
I + ++ F +A + D G+ + + +V G Y+SPE + +D
Sbjct: 146 NIMISATNAVKVMDFGIARAIA--DSGN--SVTQTAAVIGTAQYLSPEQARGDSVDARSD 201
Query: 709 VYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHE 741
VYS G V+ EV+TG+ P + + V E
Sbjct: 202 VYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 33/261 (12%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNL 170
F + E +G G +G VY+A G VVA+K L + E T E+ + L H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
V+L E++L LV++++ ++ L + + + A + K + L L +
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
H +++HRD+K N++++++ +L DFGLAR R + +
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF---------GVPVRTYXHEVV- 168
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII--LLD 348
T+ Y PE + D++S G + E+V+ RRA+ +P D I L
Sbjct: 169 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL---FPGDSEIDQLFR 218
Query: 349 WIRRLSDEGKVLQAGDNRLSD 369
R L +V+ G + D
Sbjct: 219 IFRTLGTPDEVVWPGVTSMPD 239
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/214 (18%), Positives = 96/214 (44%), Gaps = 18/214 (8%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGM-SKCPALRTRFSNELQNLARLR 568
+ NF + +++ E +G Y+ + V +K++ + ++ + + E+ L L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 569 HRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASA 628
H N+V+L + ++ +++++ + + I +++ + + +++ LA
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA-- 120
Query: 629 ILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRG 688
+ H + +V+HR++ + ++ + G+ LA+F G T + V
Sbjct: 121 --FCH---SHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVV-- 168
Query: 689 IFGYMSPEYIESGEATSMA-DVYSFGVVVLEVVT 721
Y +PE + + S A D++S G + E+VT
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 33/261 (12%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNL 170
F + E +G G +G VY+A G VVA+K L + E T E+ + L H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
V+L E++L LV++++ ++ L + + + A + K + L L +
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
H +++HRD+K N++++++ +L DFGLAR R + +
Sbjct: 121 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAF---------GVPVRTYXHEVV- 167
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII--LLD 348
T+ Y PE + D++S G + E+V+ RRA+ +P D I L
Sbjct: 168 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL---FPGDSEIDQLFR 217
Query: 349 WIRRLSDEGKVLQAGDNRLSD 369
R L +V+ G + D
Sbjct: 218 IFRTLGTPDEVVWPGVTSMPD 238
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/214 (18%), Positives = 96/214 (44%), Gaps = 18/214 (8%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGM-SKCPALRTRFSNELQNLARLR 568
+ NF + +++ E +G Y+ + V +K++ + ++ + + E+ L L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 569 HRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASA 628
H N+V+L + ++ +++++ + + I +++ + + +++ LA
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA-- 119
Query: 629 ILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRG 688
+ H + +V+HR++ + ++ + G+ LA+F G T + V
Sbjct: 120 --FCH---SHRVLHRDLKPENLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVV-- 167
Query: 689 IFGYMSPEYIESGEATSMA-DVYSFGVVVLEVVT 721
Y +PE + + S A D++S G + E+VT
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 33/261 (12%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNL 170
F + E +G G +G VY+A G VVA+K L + E T E+ + L H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
V+L E++L LV++++ ++ L + + + A + K + L L +
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
H +++HRD+K N++++++ +L DFGLAR R + +
Sbjct: 121 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF---------GVPVRTYXHEVV- 167
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII--LLD 348
T+ Y PE + D++S G + E+V+ RRA+ +P D I L
Sbjct: 168 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL---FPGDSEIDQLFR 217
Query: 349 WIRRLSDEGKVLQAGDNRLSD 369
R L +V+ G + D
Sbjct: 218 IFRTLGTPDEVVWPGVTSMPD 238
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 39/214 (18%), Positives = 96/214 (44%), Gaps = 18/214 (8%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGM-SKCPALRTRFSNELQNLARLR 568
+ NF + +++ E +G Y+ + V +K++ + ++ + + E+ L L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 569 HRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASA 628
H N+V+L + ++ +++++ + + I +++ + + +++ LA
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA-- 119
Query: 629 ILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRG 688
+ H + +V+HR++ + ++ + G+ LA+F G T + V
Sbjct: 120 --FCH---SHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVV-- 167
Query: 689 IFGYMSPEYIESGEATSMA-DVYSFGVVVLEVVT 721
Y +PE + + S A D++S G + E+VT
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 33/261 (12%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNL 170
F + E +G G +G VY+A G VVA+K L + E T E+ + L H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
V+L E++L LV++++ ++ L + + + A + K + L L +
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
H +++HRD+K N++++++ +L DFGLAR R + +
Sbjct: 120 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF---------GVPVRTYXHEVV- 166
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII--LLD 348
T+ Y PE + D++S G + E+V+ RRA+ +P D I L
Sbjct: 167 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL---FPGDSEIDQLFR 216
Query: 349 WIRRLSDEGKVLQAGDNRLSD 369
R L +V+ G + D
Sbjct: 217 IFRTLGTPDEVVWPGVTSMPD 237
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 39/214 (18%), Positives = 96/214 (44%), Gaps = 18/214 (8%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGM-SKCPALRTRFSNELQNLARLR 568
+ NF + +++ E +G Y+ + V +K++ + ++ + + E+ L L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 569 HRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASA 628
H N+V+L + ++ +++++ + + I +++ + + +++ LA
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA-- 118
Query: 629 ILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRG 688
+ H + +V+HR++ + ++ + G+ LA+F G T + V
Sbjct: 119 --FCH---SHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVV-- 166
Query: 689 IFGYMSPEYIESGEATSMA-DVYSFGVVVLEVVT 721
Y +PE + + S A D++S G + E+VT
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 96/223 (43%), Gaps = 31/223 (13%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRNLVRL 173
+ +G G F KV A G VAVK + + +K F E+ + L H N+V+L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKL 78
Query: 174 RGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHE 233
E L LV +Y + + L A + ++ + R + +A+ Y H+
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVF-------DYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 234 QLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTR 293
+ I+HRD+K N++LD+ N ++ DFG + +E + + +
Sbjct: 132 KF---IVHRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDA------------- 171
Query: 294 IGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
G Y PE FQ + DV+S G+++ +VSG D
Sbjct: 172 FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 33/182 (18%)
Query: 558 SNELQNLAR-------LRHRNLVQLCGWCTEQGEMLVIYDY-SATRILSHLLFHNNHRIG 609
S+ LQ L R L H N+V+L + + ++ +Y S + +L+ H +
Sbjct: 54 SSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK 113
Query: 610 HSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALA-EF 668
+ ++ + + SA+ Y H+++ ++HR++ + + LD DMN ++ F + EF
Sbjct: 114 EARAKF-------RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF 163
Query: 669 LTRNDHGHRKATSGNR--SVRGIFGYMSPEYIESGEATSM-ADVYSFGVVVLEVVTGQMA 725
T GN+ + G Y +PE + + DV+S GV++ +V+G +
Sbjct: 164 -----------TFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
Query: 726 VD 727
D
Sbjct: 213 FD 214
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 33/261 (12%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNL 170
F + E +G G +G VY+A G VVA+K L + E T E+ + L H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
V+L E++L LV++++ ++ L + + + A + K + L L +
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
H +++HRD+K N++++++ +L DFGLAR R + +
Sbjct: 120 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF---------GVPVRTYXHEVV- 166
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII--LLD 348
T+ Y PE + D++S G + E+V+ RRA+ +P D I L
Sbjct: 167 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL---FPGDSEIDQLFR 216
Query: 349 WIRRLSDEGKVLQAGDNRLSD 369
R L +V+ G + D
Sbjct: 217 IFRTLGTPDEVVWPGVTSMPD 237
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 514 NFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGM-SKCPALRTRFSNELQNLARLRHRN 571
NF + +++ E +G Y+ + V +K++ + ++ + + E+ L L H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 572 LVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILY 631
+V+L + ++ +++++ + + I +++ + + +++ LA +
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA----F 119
Query: 632 LHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFG 691
H + +V+HR++ + ++ + G+ LA+F G T + V
Sbjct: 120 CH---SHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVV--TLW 169
Query: 692 YMSPEYIESGEATSMA-DVYSFGVVVLEVVT 721
Y +PE + + S A D++S G + E+VT
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 29/230 (12%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNLVRLR 174
E +G G +G VY+A S G +VA+K L + E T E+ + L H N+V L
Sbjct: 27 EKVGEGTYGVVYKAK-DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLI 85
Query: 175 GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQ 234
E L LV+++M + L +VL L+ + Q K + L + + H+
Sbjct: 86 DVIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDS------QIKIYLYQLLRGVAHCHQH 138
Query: 235 LETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRI 294
+I+HRD+K N++++S +L DFGLAR R++ +
Sbjct: 139 ---RILHRDLKPQNLLINSDGALKLADFGLARAF---------GIPVRSYTHEVV----- 181
Query: 295 GGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQI 344
T+ Y P+ + D++S G + E+++G+ DDQ+
Sbjct: 182 --TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQL 229
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/216 (18%), Positives = 95/216 (43%), Gaps = 26/216 (12%)
Query: 514 NFSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSK----CPALRTRFSNELQNLARLRH 569
+ + ++V E +G Y+ + V +KR+ + P+ R E+ L L H
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR---EISLLKELHH 78
Query: 570 RNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAI 629
N+V L + + +++++ + L +L N + S ++ + Y +++ +A
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEF-MEKDLKKVLDENKTGLQDSQIKIY-LYQLLRGVA--- 133
Query: 630 LYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEF--LTRNDHGHRKATSGNRSVR 687
+ H+ +++HR++ + ++ D +L F LA + + H T R+
Sbjct: 134 -HCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPD 189
Query: 688 GIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
+ G S + ++ D++S G + E++TG+
Sbjct: 190 VLMG--------SKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 33/261 (12%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNL 170
F + E +G G +G VY+A G VVA+K L + E T E+ + L H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
V+L E++L LV++++ ++ L + + + A + K + L L +
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
H +++HRD+K N++++++ +L DFGLAR R + +
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF---------GVPVRTYXHEVV- 168
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII--LLD 348
T+ Y PE + D++S G + E+V+ RRA+ +P D I L
Sbjct: 169 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL---FPGDSEIDQLFR 218
Query: 349 WIRRLSDEGKVLQAGDNRLSD 369
R L +V+ G + D
Sbjct: 219 IFRTLGTPDEVVWPGVTSMPD 239
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/216 (18%), Positives = 97/216 (44%), Gaps = 18/216 (8%)
Query: 509 ISATNNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGM-SKCPALRTRFSNELQNLAR 566
+ + NF + +++ E +G Y+ + V +K++ + ++ + + E+ L
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 567 LRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLA 626
L H N+V+L + ++ +++++ + + I +++ + + +++ LA
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA 120
Query: 627 SAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSV 686
+ H + +V+HR++ + ++ + G+ LA+F G T + V
Sbjct: 121 ----FCH---SHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 687 RGIFGYMSPEYIESGEATSMA-DVYSFGVVVLEVVT 721
Y +PE + + S A D++S G + E+VT
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 33/261 (12%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNL 170
F + E +G G +G VY+A G VVA+K L + E T E+ + L H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
V+L E++L LV++++ ++ L + + + A + K + L L +
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
H +++HRD+K N++++++ +L DFGLAR R + +
Sbjct: 121 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF---------GVPVRTYXHEVV- 167
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII--LLD 348
T+ Y PE + D++S G + E+V+ RRA+ +P D I L
Sbjct: 168 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL---FPGDSEIDQLFR 217
Query: 349 WIRRLSDEGKVLQAGDNRLSD 369
R L +V+ G + D
Sbjct: 218 IFRTLGTPDEVVWPGVTSMPD 238
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 39/214 (18%), Positives = 96/214 (44%), Gaps = 18/214 (8%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGM-SKCPALRTRFSNELQNLARLR 568
+ NF + +++ E +G Y+ + V +K++ + ++ + + E+ L L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 569 HRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASA 628
H N+V+L + ++ +++++ + + I +++ + + +++ LA
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA-- 119
Query: 629 ILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRG 688
+ H + +V+HR++ + ++ + G+ LA+F G T + V
Sbjct: 120 --FCH---SHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVV-- 167
Query: 689 IFGYMSPEYIESGEATSMA-DVYSFGVVVLEVVT 721
Y +PE + + S A D++S G + E+VT
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 33/261 (12%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNL 170
F + E +G G +G VY+A G VVA+K L + E T E+ + L H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
V+L E++L LV++++ ++ L + + + A + K + L L +
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
H +++HRD+K N++++++ +L DFGLAR R + +
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF---------GVPVRTYXHEVV- 165
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII--LLD 348
T+ Y PE + D++S G + E+V+ RRA+ +P D I L
Sbjct: 166 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL---FPGDSEIDQLFR 215
Query: 349 WIRRLSDEGKVLQAGDNRLSD 369
R L +V+ G + D
Sbjct: 216 IFRTLGTPDEVVWPGVTSMPD 236
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 39/214 (18%), Positives = 96/214 (44%), Gaps = 18/214 (8%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGM-SKCPALRTRFSNELQNLARLR 568
+ NF + +++ E +G Y+ + V +K++ + ++ + + E+ L L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 569 HRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASA 628
H N+V+L + ++ +++++ + + I +++ + + +++ LA
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA-- 117
Query: 629 ILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRG 688
+ H + +V+HR++ + ++ + G+ LA+F G T + V
Sbjct: 118 --FCH---SHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVV-- 165
Query: 689 IFGYMSPEYIESGEATSMA-DVYSFGVVVLEVVT 721
Y +PE + + S A D++S G + E+VT
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 33/261 (12%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNL 170
F + E +G G +G VY+A G VVA+K L + E T E+ + L H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
V+L E++L LV++++ ++ L + + + A + K + L L +
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
H +++HRD+K N++++++ +L DFGLAR R + +
Sbjct: 120 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAF---------GVPVRTYXHEVV- 166
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII--LLD 348
T+ Y PE + D++S G + E+V+ RRA+ +P D I L
Sbjct: 167 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL---FPGDSEIDQLFR 216
Query: 349 WIRRLSDEGKVLQAGDNRLSD 369
R L +V+ G + D
Sbjct: 217 IFRTLGTPDEVVWPGVTSMPD 237
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 39/214 (18%), Positives = 96/214 (44%), Gaps = 18/214 (8%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGM-SKCPALRTRFSNELQNLARLR 568
+ NF + +++ E +G Y+ + V +K++ + ++ + + E+ L L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 569 HRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASA 628
H N+V+L + ++ +++++ + + I +++ + + +++ LA
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA-- 118
Query: 629 ILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRG 688
+ H + +V+HR++ + ++ + G+ LA+F G T + V
Sbjct: 119 --FCH---SHRVLHRDLKPENLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVV-- 166
Query: 689 IFGYMSPEYIESGEATSMA-DVYSFGVVVLEVVT 721
Y +PE + + S A D++S G + E+VT
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 97/223 (43%), Gaps = 31/223 (13%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRNLVRL 173
+ +G G F KV A G VAV+ + + +K F E+ + L H N+V+L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKL 78
Query: 174 RGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHE 233
E L LV +Y + + L A + ++ + R + +A+ Y H+
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVF-------DYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 234 QLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTR 293
+ I+HRD+K N++LD+ N ++ DFG + +E + + +
Sbjct: 132 KF---IVHRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDT------------- 171
Query: 294 IGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
G+ Y PE FQ + DV+S G+++ +VSG D
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 33/182 (18%)
Query: 558 SNELQNLAR-------LRHRNLVQLCGWCTEQGEMLVIYDY-SATRILSHLLFHNNHRIG 609
S+ LQ L R L H N+V+L + + ++ +Y S + +L+ H +
Sbjct: 54 SSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK 113
Query: 610 HSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALA-EF 668
+ ++ + + SA+ Y H+++ ++HR++ + + LD DMN ++ F + EF
Sbjct: 114 EARAKF-------RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF 163
Query: 669 LTRNDHGHRKATSGNR--SVRGIFGYMSPEYIESGEATSM-ADVYSFGVVVLEVVTGQMA 725
T GN+ + G Y +PE + + DV+S GV++ +V+G +
Sbjct: 164 -----------TFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
Query: 726 VD 727
D
Sbjct: 213 FD 214
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 33/261 (12%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNL 170
F + E +G G +G VY+A G VVA+K L + E T E+ + L H N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
V+L E++L LV++++ ++ L + + + A + K + L L +
Sbjct: 69 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
H +++HRD+K N++++++ +L DFGLAR R + +
Sbjct: 123 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF---------GVPVRTYXHEVV- 169
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII--LLD 348
T+ Y PE + D++S G + E+V+ RRA+ +P D I L
Sbjct: 170 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL---FPGDSEIDQLFR 219
Query: 349 WIRRLSDEGKVLQAGDNRLSD 369
R L +V+ G + D
Sbjct: 220 IFRTLGTPDEVVWPGVTSMPD 240
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/216 (18%), Positives = 97/216 (44%), Gaps = 18/216 (8%)
Query: 509 ISATNNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGM-SKCPALRTRFSNELQNLAR 566
+ + NF + +++ E +G Y+ + V +K++ + ++ + + E+ L
Sbjct: 3 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 567 LRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLA 626
L H N+V+L + ++ +++++ + + I +++ + + +++ LA
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA 121
Query: 627 SAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSV 686
+ H + +V+HR++ + ++ + G+ LA+F G T + V
Sbjct: 122 ----FCH---SHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVV 169
Query: 687 RGIFGYMSPEYIESGEATSMA-DVYSFGVVVLEVVT 721
Y +PE + + S A D++S G + E+VT
Sbjct: 170 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 33/261 (12%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNL 170
F + E +G G +G VY+A G VVA+K L + E T E+ + L H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
V+L E++L LV++++ ++ L + + + A + K + L L +
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
H +++HRD+K N++++++ +L DFGLAR R + +
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF---------GVPVRTYXHEVV- 165
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII--LLD 348
T+ Y PE + D++S G + E+V+ RRA+ +P D I L
Sbjct: 166 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL---FPGDSEIDQLFR 215
Query: 349 WIRRLSDEGKVLQAGDNRLSD 369
R L +V+ G + D
Sbjct: 216 IFRTLGTPDEVVWPGVTSMPD 236
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 39/214 (18%), Positives = 96/214 (44%), Gaps = 18/214 (8%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGM-SKCPALRTRFSNELQNLARLR 568
+ NF + +++ E +G Y+ + V +K++ + ++ + + E+ L L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 569 HRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASA 628
H N+V+L + ++ +++++ + + I +++ + + +++ LA
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA-- 117
Query: 629 ILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRG 688
+ H + +V+HR++ + ++ + G+ LA+F G T + V
Sbjct: 118 --FCH---SHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVV-- 165
Query: 689 IFGYMSPEYIESGEATSMA-DVYSFGVVVLEVVT 721
Y +PE + + S A D++S G + E+VT
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 33/261 (12%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNL 170
F + E +G G +G VY+A G VVA+K L + E T E+ + L H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
V+L E++L LV++++ ++ L + + + A + K + L L +
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
H +++HRD+K N++++++ +L DFGLAR R + +
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF---------GVPVRTYXHEVV- 164
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII--LLD 348
T+ Y PE + D++S G + E+V+ RRA+ +P D I L
Sbjct: 165 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL---FPGDSEIDQLFR 214
Query: 349 WIRRLSDEGKVLQAGDNRLSD 369
R L +V+ G + D
Sbjct: 215 IFRTLGTPDEVVWPGVTSMPD 235
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 514 NFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGM-SKCPALRTRFSNELQNLARLRHRN 571
NF + +++ E +G Y+ + V +K++ + ++ + + E+ L L H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 572 LVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILY 631
+V+L + ++ +++++ + + I +++ + + +++ LA +
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA----F 117
Query: 632 LHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFG 691
H + +V+HR++ + ++ + G+ LA+F G T + V
Sbjct: 118 CH---SHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVV--TLW 167
Query: 692 YMSPEYIESGEATSMA-DVYSFGVVVLEVVT 721
Y +PE + + S A D++S G + E+VT
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 33/261 (12%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNL 170
F + E +G G +G VY+A G VVA+K L + E T E+ + L H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
V+L E++L LV++++ ++ L + + + A + K + L L +
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
H +++HRD+K N++++++ +L DFGLAR R + +
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF---------GVPVRTYXHEVV- 165
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII--LLD 348
T+ Y PE + D++S G + E+V+ RRA+ +P D I L
Sbjct: 166 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL---FPGDSEIDQLFR 215
Query: 349 WIRRLSDEGKVLQAGDNRLSD 369
R L +V+ G + D
Sbjct: 216 IFRTLGTPDEVVWPGVTSMPD 236
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 39/214 (18%), Positives = 96/214 (44%), Gaps = 18/214 (8%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGM-SKCPALRTRFSNELQNLARLR 568
+ NF + +++ E +G Y+ + V +K++ + ++ + + E+ L L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 569 HRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASA 628
H N+V+L + ++ +++++ + + I +++ + + +++ LA
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA-- 117
Query: 629 ILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRG 688
+ H + +V+HR++ + ++ + G+ LA+F G T + V
Sbjct: 118 --FCH---SHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVV-- 165
Query: 689 IFGYMSPEYIESGEATSMA-DVYSFGVVVLEVVT 721
Y +PE + + S A D++S G + E+VT
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 33/261 (12%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNL 170
F + E +G G +G VY+A G VVA+K L + E T E+ + L H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
V+L E++L LV++++ ++ L + + + A + K + L L +
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
H +++HRD+K N++++++ +L DFGLAR R + +
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF---------GVPVRTYXHEVV- 164
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII--LLD 348
T+ Y PE + D++S G + E+V+ RRA+ +P D I L
Sbjct: 165 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL---FPGDSEIDQLFR 214
Query: 349 WIRRLSDEGKVLQAGDNRLSD 369
R L +V+ G + D
Sbjct: 215 IFRTLGTPDEVVWPGVTSMPD 235
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 514 NFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGM-SKCPALRTRFSNELQNLARLRHRN 571
NF + +++ E +G Y+ + V +K++ + ++ + + E+ L L H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 572 LVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILY 631
+V+L + ++ +++++ + + I +++ + + +++ LA +
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA----F 117
Query: 632 LHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFG 691
H + +V+HR++ + ++ + G+ LA+F G T + V
Sbjct: 118 CH---SHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVV--TLW 167
Query: 692 YMSPEYIESGEATSMA-DVYSFGVVVLEVVT 721
Y +PE + + S A D++S G + E+VT
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 115/262 (43%), Gaps = 35/262 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNL 170
F + E +G G +G VY+A G VVA+K L + E T E+ + L H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAA-PLNWEQRKKIIRGLAAALH 229
V+L E++L LV++++ D F L PL ++++GLA
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQ---DLKTFMDASALTGIPLPLIKSYLFQLLQGLA---- 120
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
+ H +++HRD+K N++++++ +L DFGLAR R + +
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF---------GVPVRTYXHEVV 168
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII--LL 347
T+ Y PE + D++S G + E+V+ RRA+ +P D I L
Sbjct: 169 -------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL---FPGDSEIDQLF 217
Query: 348 DWIRRLSDEGKVLQAGDNRLSD 369
R L +V+ G + D
Sbjct: 218 RIFRTLGTPDEVVWPGVTSMPD 239
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/214 (18%), Positives = 97/214 (45%), Gaps = 18/214 (8%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGM-SKCPALRTRFSNELQNLARLR 568
+ NF + +++ E +G Y+ + V +K++ + ++ + + E+ L L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 569 HRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASA 628
H N+V+L + ++ +++++ + + + I +++ + + +++ LA
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIK-SYLFQLLQGLA-- 120
Query: 629 ILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRG 688
+ H + +V+HR++ + ++ + G+ LA+F G T + V
Sbjct: 121 --FCH---SHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVV-- 168
Query: 689 IFGYMSPEYIESGEATSMA-DVYSFGVVVLEVVT 721
Y +PE + + S A D++S G + E+VT
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 29/230 (12%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNLVRLR 174
E +G G +G VY+A S G +VA+K L + E T E+ + L H N+V L
Sbjct: 27 EKVGEGTYGVVYKAK-DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLI 85
Query: 175 GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQ 234
E L LV+++M + L +VL L+ + Q K + L + + H+
Sbjct: 86 DVIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDS------QIKIYLYQLLRGVAHCHQH 138
Query: 235 LETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRI 294
+I+HRD+K N++++S +L DFGLAR R++ +
Sbjct: 139 ---RILHRDLKPQNLLINSDGALKLADFGLARAF---------GIPVRSYTHEVV----- 181
Query: 295 GGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQI 344
T+ Y P+ + D++S G + E+++G+ DDQ+
Sbjct: 182 --TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQL 229
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/216 (18%), Positives = 95/216 (43%), Gaps = 26/216 (12%)
Query: 514 NFSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSK----CPALRTRFSNELQNLARLRH 569
+ + ++V E +G Y+ + V +KR+ + P+ R E+ L L H
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR---EISLLKELHH 78
Query: 570 RNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAI 629
N+V L + + +++++ + L +L N + S ++ + Y +++ +A
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEF-MEKDLKKVLDENKTGLQDSQIKIY-LYQLLRGVA--- 133
Query: 630 LYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEF--LTRNDHGHRKATSGNRSVR 687
+ H+ +++HR++ + ++ D +L F LA + + H T R+
Sbjct: 134 -HCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPD 189
Query: 688 GIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
+ G S + ++ D++S G + E++TG+
Sbjct: 190 VLMG--------SKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 109/230 (47%), Gaps = 36/230 (15%)
Query: 119 LGSGGFGKVYRAVL-------PSDGTVVAVKCLAEKGERFEKTFAAELVAVAHL-----R 166
LG G FG+V A P+ T VAVK L K + EK + +L++ + +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLS-DLISEMEMMKMIGK 92
Query: 167 HRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVL-FRRPENLEAA-APLNWEQRKKIIRGL 224
H+N++ L G C + L ++ +Y +L L RRP LE + P + + + + L
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 225 AAALHYLHEQLE----TQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSS 280
+ + + +E + IHRD+ NV++ ++ DFGLAR + H + +T++
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-HHIDXXKKTTN 211
Query: 281 ARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
R + ++ PE+ + T +SDV+SFG+++ E+ +
Sbjct: 212 GRL-------------PVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFT 247
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 105/239 (43%), Gaps = 34/239 (14%)
Query: 568 RHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLL-----------FHNNHRIGHSILQWH 616
+H+N++ L G CT+ G + VI +Y++ L L F+ +H L
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQ-LSSK 150
Query: 617 HRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGH 676
+ +A + YL +++ IHR++ + + + D ++ F LA + D
Sbjct: 151 DLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDX-X 206
Query: 677 RKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLV 736
+K T+G V+ +M+PE + T +DV+SFGV++ E+ T + +P L
Sbjct: 207 KKTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
Query: 737 KRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
K + E +P +L + +MR C + P RP+ +Q++ LD
Sbjct: 263 KLLKEGHRMDKPSNCTNELYM--------MMR------DCWHAVPSQRPTFKQLVEDLD 307
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 33/261 (12%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNL 170
F + E +G G +G VY+A G VVA+K L + E T E+ + L H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
V+L E++L LV++++ ++ L + + + A + K + L L +
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
H +++HRD+K N++++++ +L DFGLAR R + +
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF---------GVPVRTYXHEVV- 165
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII--LLD 348
T+ Y PE + D++S G + E+V+ RRA+ +P D I L
Sbjct: 166 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL---FPGDSEIDQLFR 215
Query: 349 WIRRLSDEGKVLQAGDNRLSD 369
R L +V+ G + D
Sbjct: 216 IFRTLGTPDEVVWPGVTSMPD 236
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 39/214 (18%), Positives = 96/214 (44%), Gaps = 18/214 (8%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGM-SKCPALRTRFSNELQNLARLR 568
+ NF + +++ E +G Y+ + V +K++ + ++ + + E+ L L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 569 HRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASA 628
H N+V+L + ++ +++++ + + I +++ + + +++ LA
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA-- 117
Query: 629 ILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRG 688
+ H + +V+HR++ + ++ + G+ LA+F G T + V
Sbjct: 118 --FCH---SHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVV-- 165
Query: 689 IFGYMSPEYIESGEATSMA-DVYSFGVVVLEVVT 721
Y +PE + + S A D++S G + E+VT
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 97/215 (45%), Gaps = 28/215 (13%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
E +G G G VY A+ + G VA++ + + + ++ E++ + ++ N+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 177 CVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLE 236
+ D+L +V +Y+ SL V+ ++ Q + R AL +LH
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV--------TETCMDEGQIAAVCRECLQALEFLHS--- 134
Query: 237 TQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGG 296
Q+IHRD+K+ N++L + +L DFG + E S R+ G
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE-------QSKRSEMV---------G 178
Query: 297 TIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T ++ PE + + K D++S GI+ +E++ G
Sbjct: 179 TPYWMAPEVVTRKAYG-PKVDIWSLGIMAIEMIEG 212
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 89/210 (42%), Gaps = 19/210 (9%)
Query: 515 FSESQRVAEMDFGTAYQGF-LDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLV 573
++ +++ + GT Y + Q V ++++ + + P + NE+ + ++ N+V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK-KELIINEILVMRENKNPNIV 80
Query: 574 QLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLH 633
E+ V+ +Y A L+ + + + + + + A+ +LH
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSLTDV-------VTETCMDEGQIAAVCRECLQALEFLH 133
Query: 634 EEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYM 693
+ QVIHR+I S I L D + +L F +T S + G +M
Sbjct: 134 ---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-------SKRSEMVGTPYWM 183
Query: 694 SPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
+PE + D++S G++ +E++ G+
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 95/223 (42%), Gaps = 31/223 (13%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRNLVRL 173
E LG G FGKV A VA+K ++ K E+ + LRH ++++L
Sbjct: 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKL 74
Query: 174 RGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHE 233
+++V +Y D ++ ++ + ++ ++ + + A+ Y H
Sbjct: 75 YDVITTPTDIVMVIEYAGGELFDYIVEKKR--------MTEDEGRRFFQQIICAIEYCHR 126
Query: 234 QLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTR 293
+I+HRD+K N++LD N ++ DFGL+ + ++TS
Sbjct: 127 H---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD--GNFLKTSC------------- 168
Query: 294 IGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
G+ Y PE A + DV+S GIV+ ++ GR D
Sbjct: 169 --GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 97/215 (45%), Gaps = 28/215 (13%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
E +G G G VY A+ + G VA++ + + + ++ E++ + ++ N+V
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 177 CVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLE 236
+ D+L +V +Y+ SL V+ ++ Q + R AL +LH
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVV--------TETCMDEGQIAAVCRECLQALEFLHS--- 135
Query: 237 TQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGG 296
Q+IHRD+K+ N++L + +L DFG + E S R+ G
Sbjct: 136 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE-------QSKRSXMV---------G 179
Query: 297 TIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T ++ PE + + K D++S GI+ +E++ G
Sbjct: 180 TPYWMAPEVVTRKAYG-PKVDIWSLGIMAIEMIEG 213
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 89/210 (42%), Gaps = 19/210 (9%)
Query: 515 FSESQRVAEMDFGTAYQGF-LDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLV 573
++ +++ + GT Y + Q V ++++ + + P + NE+ + ++ N+V
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK-KELIINEILVMRENKNPNIV 81
Query: 574 QLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLH 633
E+ V+ +Y A L+ + + + + + + A+ +LH
Sbjct: 82 NYLDSYLVGDELWVVMEYLAGGSLTDV-------VTETCMDEGQIAAVCRECLQALEFLH 134
Query: 634 EEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYM 693
+ QVIHR+I S I L D + +L F +T S + G +M
Sbjct: 135 ---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-------SKRSXMVGTPYWM 184
Query: 694 SPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
+PE + D++S G++ +E++ G+
Sbjct: 185 APEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRN---LVRLR 174
+G G +G V + V G ++AVK + + E+ +K +L V +R + +V+
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVV--MRSSDCPYIVQFY 87
Query: 175 GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQ 234
G E + + M + S D+ L+ P E KI AL++L E
Sbjct: 88 GALFREGDCWICMELM-STSFDKFYKYVYSVLDDVIP--EEILGKITLATVKALNHLKEN 144
Query: 235 LETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRI 294
L +IIHRD+K SN++LD N +L DFG++ Q+ S A+ TR
Sbjct: 145 L--KIIHRDIKPSNILLDRSGNIKLCDFGISG--------QLVDSIAK---------TRD 185
Query: 295 GGTIGYLPPESFQKGSVATA---KSDVFSFGIVVLEVVSGR 332
G Y+ PE + +SDV+S GI + E+ +GR
Sbjct: 186 AGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 12/105 (11%)
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
+LA+ H + N ++IHR+I S I LD N +L F ++ L + R A
Sbjct: 131 TLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDA---- 186
Query: 684 RSVRGIFGYMSPEYIESGEATS----MADVYSFGVVVLEVVTGQM 724
G YM+PE I+ + +DV+S G+ + E+ TG+
Sbjct: 187 ----GCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRF 227
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 28/215 (13%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
E +G G G VY A+ + G VA++ + + + ++ E++ + ++ N+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 177 CVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLE 236
+ D+L +V +Y+ SL V+ ++ Q + R AL +LH
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV--------TETCMDEGQIAAVCRECLQALEFLHS--- 134
Query: 237 TQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGG 296
Q+IHRD+K+ N++L + +L DFG + E Q + S+ + G
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE---QSKRST-------------MVG 178
Query: 297 TIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T ++ PE + + K D++S GI+ +E++ G
Sbjct: 179 TPYWMAPEVVTRKAYG-PKVDIWSLGIMAIEMIEG 212
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 90/210 (42%), Gaps = 19/210 (9%)
Query: 515 FSESQRVAEMDFGTAYQGF-LDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLV 573
++ +++ + GT Y + Q V ++++ + + P + NE+ + ++ N+V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK-KELIINEILVMRENKNPNIV 80
Query: 574 QLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLH 633
E+ V+ +Y A L+ + + + + + + A+ +LH
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSLTDV-------VTETCMDEGQIAAVCRECLQALEFLH 133
Query: 634 EEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYM 693
+ QVIHR+I S I L D + +L F +T S ++ G +M
Sbjct: 134 ---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-------SKRSTMVGTPYWM 183
Query: 694 SPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
+PE + D++S G++ +E++ G+
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 97/235 (41%), Gaps = 40/235 (17%)
Query: 104 AELYIGSNG---FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFA---A 157
AEL+ + F + +G G FG VY A + VVA+K ++ G++ + +
Sbjct: 44 AELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIK 103
Query: 158 ELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQR 217
E+ + LRH N ++ RG + E LV +Y + D + + PL +
Sbjct: 104 EVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHK-------KPLQEVEI 156
Query: 218 KKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMR 277
+ G L YLH +IHRDVK N++L +LGDFG A
Sbjct: 157 AAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASI---------- 203
Query: 278 TSSARNHQFHLAETTRIGGTIGYLPPE---SFQKGSVATAKSDVFSFGIVVLEVV 329
+A GT ++ PE + +G K DV+S GI +E+
Sbjct: 204 ----------MAPANXFVGTPYWMAPEVILAMDEGQY-DGKVDVWSLGITCIELA 247
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 81/212 (38%), Gaps = 26/212 (12%)
Query: 515 FSESQRVAEMDFGTAYQGF-LDNHQYVLVKRLGMS--KCPALRTRFSNELQNLARLRHRN 571
FS+ + + FG Y + N + V +K++ S + E++ L +LRH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 572 LVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILY 631
+Q G + ++ +Y L H LQ + + Y
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKP------LQEVEIAAVTHGALQGLAY 169
Query: 632 LHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFG 691
LH + +IHR++ + I L +LG F A + N V G
Sbjct: 170 LH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM----------APANXFV-GTPY 215
Query: 692 YMSPEYI---ESGEATSMADVYSFGVVVLEVV 720
+M+PE I + G+ DV+S G+ +E+
Sbjct: 216 WMAPEVILAMDEGQYDGKVDVWSLGITCIELA 247
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 118/262 (45%), Gaps = 35/262 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNL 170
F + E +G G +G VY+A G VVA+K L + E T E+ + L H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAA-PLNWEQRKKIIRGLAAALH 229
V+L E++L LV++++ D F L PL ++++GLA
Sbjct: 64 VKLLDVIHTENKLYLVFEHVHQ---DLKTFMDASALTGIPLPLIKSYLFQLLQGLA---- 116
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
+ H +++HRD+K N++++++ +L DFGLAR +RT + H+
Sbjct: 117 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPVRTYT---HEV--- 163
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII--LL 347
T+ Y PE + D++S G + E+V+ RRA+ +P D I L
Sbjct: 164 ------VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL---FPGDSEIDQLF 213
Query: 348 DWIRRLSDEGKVLQAGDNRLSD 369
R L +V+ G + D
Sbjct: 214 RIFRTLGTPDEVVWPGVTSMPD 235
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 102/236 (43%), Gaps = 44/236 (18%)
Query: 104 AELYIGSNG---FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFA---A 157
AEL+ + F + +G G FG VY A + VVA+K ++ G++ + +
Sbjct: 5 AELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIK 64
Query: 158 ELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRV-LFRRP-ENLEAAAPLNWE 215
E+ + LRH N ++ RG + E LV +Y + D + + ++P + +E AA
Sbjct: 65 EVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAA----- 119
Query: 216 QRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQ 275
+ G L YLH +IHRDVK N++L +LGDFG A
Sbjct: 120 ----VTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASI-------- 164
Query: 276 MRTSSARNHQFHLAETTRIGGTIGYLPPE---SFQKGSVATAKSDVFSFGIVVLEV 328
+A GT ++ PE + +G K DV+S GI +E+
Sbjct: 165 ------------MAPANXFVGTPYWMAPEVILAMDEGQY-DGKVDVWSLGITCIEL 207
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 85/214 (39%), Gaps = 32/214 (14%)
Query: 515 FSESQRVAEMDFGTAYQGF-LDNHQYVLVKRLGMS--KCPALRTRFSNELQNLARLRHRN 571
FS+ + + FG Y + N + V +K++ S + E++ L +LRH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 572 LVQLCGWCTEQGEMLVIYDY---SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASA 628
+Q G + ++ +Y SA+ +L + LQ +
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLL---------EVHKKPLQEVEIAAVTHGALQG 127
Query: 629 ILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRG 688
+ YLH + +IHR++ + I L +LG F A + N V G
Sbjct: 128 LAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM----------APANXFV-G 173
Query: 689 IFGYMSPEYI---ESGEATSMADVYSFGVVVLEV 719
+M+PE I + G+ DV+S G+ +E+
Sbjct: 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 97/215 (45%), Gaps = 28/215 (13%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
E +G G G VY A+ + G VA++ + + + ++ E++ + ++ N+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 177 CVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLE 236
+ D+L +V +Y+ SL V+ ++ Q + R AL +LH
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV--------TETCMDEGQIAAVCRECLQALEFLHS--- 134
Query: 237 TQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGG 296
Q+IHRD+K+ N++L + +L DFG + E S R+ G
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE-------QSKRSXMV---------G 178
Query: 297 TIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T ++ PE + + K D++S GI+ +E++ G
Sbjct: 179 TPYWMAPEVVTRKAYG-PKVDIWSLGIMAIEMIEG 212
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 89/210 (42%), Gaps = 19/210 (9%)
Query: 515 FSESQRVAEMDFGTAYQGF-LDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLV 573
++ +++ + GT Y + Q V ++++ + + P + NE+ + ++ N+V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK-KELIINEILVMRENKNPNIV 80
Query: 574 QLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLH 633
E+ V+ +Y A L+ + + + + + + A+ +LH
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSLTDV-------VTETCMDEGQIAAVCRECLQALEFLH 133
Query: 634 EEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYM 693
+ QVIHR+I S I L D + +L F +T S + G +M
Sbjct: 134 ---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-------SKRSXMVGTPYWM 183
Query: 694 SPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
+PE + D++S G++ +E++ G+
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 99/225 (44%), Gaps = 25/225 (11%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
+D + LG G +G+V AV VAVK + ++ + E+ A L H N+V
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVV 68
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
+ G H + + Y ++ S + R ++ P ++ L A + YL
Sbjct: 69 KFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP----DAQRFFHQLMAGVVYL 121
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
H I HRD+K N++LD + N ++ DFGLA T N++ L
Sbjct: 122 HG---IGITHRDIKPENLLLDERDNLKISDFGLA------------TVFRYNNRERL--L 164
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
++ GT+ Y+ PE ++ DV+S GIV+ +++G D
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 101/229 (44%), Gaps = 34/229 (14%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVR 172
F+ E++G+G +G+VY+ G + A+K + G+ E+ + + HRN+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 173 LRGWCVH------EDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAA 226
G + +DQL LV ++ S+ ++ N L E I R +
Sbjct: 86 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNT-----LKEEWIAYICREILR 140
Query: 227 ALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQF 286
L +LH+ ++IHRD+K NV+L +L DFG++ L+ RT RN
Sbjct: 141 GLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD-------RTVGRRN--- 187
Query: 287 HLAETTRIGGTIGYLPPESFQKGSVATA----KSDVFSFGIVVLEVVSG 331
T I GT ++ PE A KSD++S GI +E+ G
Sbjct: 188 -----TFI-GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 33/224 (14%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRNLVRL 173
+ +G G F KV A G VAV+ + + +K F E+ + L H N+V+L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKL 78
Query: 174 RGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHE 233
E L LV +Y + + L A + ++ + R + +A+ Y H+
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVF-------DYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 234 QLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA-ETT 292
+ I+HRD+K N++LD+ N ++ DFG + ++F +
Sbjct: 132 KF---IVHRDLKAENLLLDADMNIKIADFGFS------------------NEFTFGNKLD 170
Query: 293 RIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
G+ Y PE FQ + DV+S G+++ +VSG D
Sbjct: 171 EFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 83/182 (45%), Gaps = 33/182 (18%)
Query: 558 SNELQNLAR-------LRHRNLVQLCGWCTEQGEMLVIYDY-SATRILSHLLFHNNHRIG 609
S+ LQ L R L H N+V+L + + ++ +Y S + +L+ H +
Sbjct: 54 SSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK 113
Query: 610 HSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALA-EF 668
+ ++ + + SA+ Y H+++ ++HR++ + + LD DMN ++ F + EF
Sbjct: 114 EARAKF-------RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF 163
Query: 669 LTRNDHGHRKATSGNR--SVRGIFGYMSPEYIESGEATSM-ADVYSFGVVVLEVVTGQMA 725
T GN+ G Y +PE + + DV+S GV++ +V+G +
Sbjct: 164 -----------TFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
Query: 726 VD 727
D
Sbjct: 213 FD 214
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 116/262 (44%), Gaps = 41/262 (15%)
Query: 71 NTPRKEHSGLFHDMEGVQMSEKVGGDNPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRA 130
++P++E + H+ + V +PR SY + +I +G G G V A
Sbjct: 2 SSPQREPQRVSHEQFRAALQLVVDPGDPR--SYLDNFIK---------IGEGSTGIVCIA 50
Query: 131 VLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYM 190
+ S G +VAVK + + ++ + E+V + +H N+V + + D+L +V +++
Sbjct: 51 TVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 110
Query: 191 PNRSL-DRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNV 249
+L D V R +N EQ + + AL LH Q +IHRD+K+ ++
Sbjct: 111 EGGALTDIVTHTR---------MNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSI 158
Query: 250 MLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKG 309
+L +L DFG + E+ + + GT ++ PE +
Sbjct: 159 LLTHDGRVKLSDFGFCAQVSKEVPRR----------------KXLVGTPYWMAPELISRL 202
Query: 310 SVATAKSDVFSFGIVVLEVVSG 331
+ D++S GI+V+E+V G
Sbjct: 203 PYG-PEVDIWSLGIMVIEMVDG 223
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 82/189 (43%), Gaps = 24/189 (12%)
Query: 538 QYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRIL 597
+ V VK++ + K R NE+ + +H N+V++ E+ V+ ++ L
Sbjct: 57 KLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 115
Query: 598 SHLLFH---NNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDP 654
+ ++ H N +I L ++ A+ LH + VIHR+I S +I L
Sbjct: 116 TDIVTHTRMNEEQIAAVCL----------AVLQALSVLHAQG---VIHRDIKSDSILLTH 162
Query: 655 DMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGV 714
D +L F ++ K + + G +M+PE I D++S G+
Sbjct: 163 DGRVKLSDFGFCAQVS-------KEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGI 215
Query: 715 VVLEVVTGQ 723
+V+E+V G+
Sbjct: 216 MVIEMVDGE 224
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 115/261 (44%), Gaps = 41/261 (15%)
Query: 72 TPRKEHSGLFHDMEGVQMSEKVGGDNPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAV 131
+P++E + H+ + V +PR SY + +I +G G G V A
Sbjct: 1 SPQREPQRVSHEQFRAALQLVVDPGDPR--SYLDNFIK---------IGEGSTGIVCIAT 49
Query: 132 LPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMP 191
+ S G +VAVK + + ++ + E+V + +H N+V + + D+L +V +++
Sbjct: 50 VRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 109
Query: 192 NRSL-DRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVM 250
+L D V R +N EQ + + AL LH Q +IHRD+K+ +++
Sbjct: 110 GGALTDIVTHTR---------MNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSIL 157
Query: 251 LDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGS 310
L +L DFG + E+ + + GT ++ PE +
Sbjct: 158 LTHDGRVKLSDFGFCAQVSKEVPRR----------------KXLVGTPYWMAPELISRLP 201
Query: 311 VATAKSDVFSFGIVVLEVVSG 331
+ D++S GI+V+E+V G
Sbjct: 202 YG-PEVDIWSLGIMVIEMVDG 221
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 82/189 (43%), Gaps = 24/189 (12%)
Query: 538 QYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRIL 597
+ V VK++ + K R NE+ + +H N+V++ E+ V+ ++ L
Sbjct: 55 KLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 113
Query: 598 SHLLFH---NNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDP 654
+ ++ H N +I L ++ A+ LH + VIHR+I S +I L
Sbjct: 114 TDIVTHTRMNEEQIAAVCL----------AVLQALSVLHAQG---VIHRDIKSDSILLTH 160
Query: 655 DMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGV 714
D +L F ++ K + + G +M+PE I D++S G+
Sbjct: 161 DGRVKLSDFGFCAQVS-------KEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGI 213
Query: 715 VVLEVVTGQ 723
+V+E+V G+
Sbjct: 214 MVIEMVDGE 222
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 33/261 (12%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNL 170
F + E +G G +G VY+A G VVA+K L + E T E+ + L H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
V+L E++L LV++++ ++ L + + + A + K + L L +
Sbjct: 68 VKLLDVIHTENKLYLVFEHV-DQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
H +++HRD+K N++++++ +L DFGLAR R + +
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF---------GVPVRTYXHEVV- 168
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII--LLD 348
T+ Y PE + D++S G + E+V+ RRA+ +P D I L
Sbjct: 169 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL---FPGDSEIDQLFR 218
Query: 349 WIRRLSDEGKVLQAGDNRLSD 369
R L +V+ G + D
Sbjct: 219 IFRTLGTPDEVVWPGVTSMPD 239
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 115/262 (43%), Gaps = 35/262 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNL 170
F + E +G G +G VY+A G VVA+K L + E T E+ + L H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAA-PLNWEQRKKIIRGLAAALH 229
V+L E++L LV++++ D F L PL ++++GLA
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKD---FMDASALTGIPLPLIKSYLFQLLQGLA---- 117
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
+ H +++HRD+K N++++++ +L DFGLAR R + +
Sbjct: 118 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAF---------GVPVRTYXHEVV 165
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII--LL 347
T+ Y PE + D++S G + E+V+ RRA+ +P D I L
Sbjct: 166 -------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL---FPGDSEIDQLF 214
Query: 348 DWIRRLSDEGKVLQAGDNRLSD 369
R L +V+ G + D
Sbjct: 215 RIFRTLGTPDEVVWPGVTSMPD 236
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/214 (18%), Positives = 96/214 (44%), Gaps = 18/214 (8%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGM-SKCPALRTRFSNELQNLARLR 568
+ NF + +++ E +G Y+ + V +K++ + ++ + + E+ L L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 569 HRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASA 628
H N+V+L + ++ +++++ + + I +++ + + +++ LA
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIK-SYLFQLLQGLA-- 117
Query: 629 ILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRG 688
+ H + +V+HR++ + ++ + G+ LA+F G T + V
Sbjct: 118 --FCH---SHRVLHRDLKPENLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVV-- 165
Query: 689 IFGYMSPEYIESGEATSMA-DVYSFGVVVLEVVT 721
Y +PE + + S A D++S G + E+VT
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 27/212 (12%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
+GSG FG V+ + V A+K + E G E+ F E + L H LV+L G C+
Sbjct: 16 IGSGQFGLVHLGYWLNKDKV-AIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 73
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
+ + LV ++M + L L R L AA L + + + YL E
Sbjct: 74 EQAPICLVTEFMEHGCLSDYL-RTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC--- 124
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
+IHRD+ N ++ ++ DFG+ R++ + QY +S+ +F +
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QY----TSSTGTKF----------PV 169
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ PE F S ++KSDV+SFG+++ EV S
Sbjct: 170 KWASPEVF-SFSRYSSKSDVWSFGVLMWEVFS 200
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 85/206 (41%), Gaps = 22/206 (10%)
Query: 519 QRVAEMDFGTAYQGFLDNHQYVLVKRL---GMSKCPALRTRFSNELQNLARLRHRNLVQL 575
Q + FG + G+ N V +K + MS+ F E + + +L H LVQL
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-----EDFIEEAEVMMKLSHPKLVQL 68
Query: 576 CGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEE 635
G C EQ + ++ T + H + R + + + + YL E
Sbjct: 69 YGVCLEQAPICLV-----TEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE- 122
Query: 636 WNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSP 695
VIHR++ + + + ++ F + F+ D + +T V+ + SP
Sbjct: 123 --ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVL--DDQYTSSTGTKFPVK----WASP 174
Query: 696 EYIESGEATSMADVYSFGVVVLEVVT 721
E +S +DV+SFGV++ EV +
Sbjct: 175 EVFSFSRYSSKSDVWSFGVLMWEVFS 200
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 92/223 (41%), Gaps = 31/223 (13%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRNLVRL 173
+ +G G F KV A G VAVK + + +K F E+ L H N+V+L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIXKVLNHPNIVKL 78
Query: 174 RGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHE 233
E L LV +Y + L E A + Q + +A+ Y H+
Sbjct: 79 FEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQ-------IVSAVQYCHQ 131
Query: 234 QLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTR 293
+ I+HRD+K N++LD+ N ++ DFG + +E + + +
Sbjct: 132 KF---IVHRDLKAENLLLDADXNIKIADFGFS----NEFTFGNKLDA------------- 171
Query: 294 IGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
G Y PE FQ + DV+S G+++ +VSG D
Sbjct: 172 FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 83/182 (45%), Gaps = 33/182 (18%)
Query: 558 SNELQNLAR-------LRHRNLVQLCGWCTEQGEMLVIYDY-SATRILSHLLFHNNHRIG 609
S+ LQ L R L H N+V+L + + ++ +Y S + +L+ H +
Sbjct: 54 SSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEK 113
Query: 610 HSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALA-EF 668
+ ++ + + SA+ Y H+++ ++HR++ + + LD D N ++ F + EF
Sbjct: 114 EARAKF-------RQIVSAVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEF 163
Query: 669 LTRNDHGHRKATSGNR--SVRGIFGYMSPEYIESGEATSM-ADVYSFGVVVLEVVTGQMA 725
T GN+ + G Y +PE + + DV+S GV++ +V+G +
Sbjct: 164 -----------TFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
Query: 726 VD 727
D
Sbjct: 213 FD 214
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 101/223 (45%), Gaps = 28/223 (12%)
Query: 116 DEVLGSGGFGKVYRAVLPSDG-------TVVAVKCLAEKGERFEKTFAAELVAVAHLRHR 168
+E LG G F K+++ V G T V +K L + + ++F ++ L H+
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
+LV G CV D+ +LV +++ SLD L ++ +N +N + ++ + LAAA+
Sbjct: 73 HLVLNYGVCVCGDENILVQEFVKFGSLDTYL-KKNKNC-----INILWKLEVAKQLAAAM 126
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
H+L E +IH +V N++L + + + G+ + + + + +
Sbjct: 127 HFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQER--- 180
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
I ++PPE + +D +SFG + E+ SG
Sbjct: 181 ---------IPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 110/247 (44%), Gaps = 44/247 (17%)
Query: 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRN 169
+ F++ LG+G G V++ G V+A K + E EL +
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVL---FRRPENLEAAAPLNWEQRKKIIRGLAA 226
+V G + ++ + ++M SLD+VL R PE + + +I+GL
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI------AVIKGLT- 121
Query: 227 ALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQF 286
YL E+ +I+HRDVK SN++++S+ +L DFG++ L E+
Sbjct: 122 ---YLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEM-------------- 162
Query: 287 HLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII- 345
GT Y+ PE Q G+ + +SD++S G+ ++E+ GR YP +
Sbjct: 163 ----ANEFVGTRSYMSPERLQ-GTHYSVQSDIWSMGLSLVEMAVGR------YPRPPMAI 211
Query: 346 --LLDWI 350
LLD+I
Sbjct: 212 FELLDYI 218
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 519 QRVAEMDFGTAYQGFLDNHQ---YVLVKRL-GMSKCPALRTRFSNELQNLARLRHRNLVQ 574
++++E+ G F +H+ V+ ++L + PA+R + ELQ L +V
Sbjct: 12 EKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVG 71
Query: 575 LCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHE 634
G GE+ + ++ L +L RI IL + ++ + YL E
Sbjct: 72 FYGAFYSDGEISICMEHMDGGSLDQVL-KKAGRIPEQILG-----KVSIAVIKGLTYLRE 125
Query: 635 EWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMS 694
+ +++HR++ S I ++ +L F ++ G N V G YMS
Sbjct: 126 K--HKIMHRDVKPSNILVNSRGEIKLCDFGVS--------GQLIDEMANEFV-GTRSYMS 174
Query: 695 PEYIESGEATSMADVYSFGVVVLEVVTGQ 723
PE ++ + +D++S G+ ++E+ G+
Sbjct: 175 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 117/261 (44%), Gaps = 33/261 (12%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNL 170
F + E +G G +G VY+A G VVA+ L + E T E+ + L H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
V+L E++L LV++++ ++ L + + + A + K + L L +
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
H +++HRD+K N++++++ +L DFGLAR +RT + H+
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPVRTYT---HEV---- 164
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII--LLD 348
T+ Y PE + D++S G + E+V+ RRA+ +P D I L
Sbjct: 165 -----VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL---FPGDSEIDQLFR 215
Query: 349 WIRRLSDEGKVLQAGDNRLSD 369
R L +V+ G + D
Sbjct: 216 IFRTLGTPDEVVWPGVTSMPD 236
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 40/211 (18%), Positives = 91/211 (43%), Gaps = 18/211 (8%)
Query: 514 NFSESQRVAEMDFGTAYQG--FLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRN 571
NF + +++ E +G Y+ L L K ++ + + E+ L L H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 572 LVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILY 631
+V+L + ++ +++++ + + I +++ + + +++ LA +
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA----F 118
Query: 632 LHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFG 691
H + +V+HR++ + ++ + G+ LA+F G T + V
Sbjct: 119 CH---SHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYTHEVV--TLW 168
Query: 692 YMSPEYIESGEATSMA-DVYSFGVVVLEVVT 721
Y +PE + + S A D++S G + E+VT
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 117/261 (44%), Gaps = 33/261 (12%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNL 170
F + E +G G +G VY+A G VVA+ L + E T E+ + L H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
V+L E++L LV++++ ++ L + + + A + K + L L +
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
H +++HRD+K N++++++ +L DFGLAR +RT + H+
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR----AFGVPVRTYT---HEV---- 163
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII--LLD 348
T+ Y PE + D++S G + E+V+ RRA+ +P D I L
Sbjct: 164 -----VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL---FPGDSEIDQLFR 214
Query: 349 WIRRLSDEGKVLQAGDNRLSD 369
R L +V+ G + D
Sbjct: 215 IFRTLGTPDEVVWPGVTSMPD 235
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 40/211 (18%), Positives = 91/211 (43%), Gaps = 18/211 (8%)
Query: 514 NFSESQRVAEMDFGTAYQG--FLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRN 571
NF + +++ E +G Y+ L L K ++ + + E+ L L H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 572 LVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILY 631
+V+L + ++ +++++ + + I +++ + + +++ LA +
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA----F 117
Query: 632 LHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFG 691
H + +V+HR++ + ++ + G+ LA+F G T + V
Sbjct: 118 CH---SHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYTHEVV--TLW 167
Query: 692 YMSPEYIESGEATSMA-DVYSFGVVVLEVVT 721
Y +PE + + S A D++S G + E+VT
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 108/228 (47%), Gaps = 38/228 (16%)
Query: 112 GFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAA-------ELVAVAH 164
F ++ +G G F +VYRA DG VA+K K + F+ A E+ +
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALK----KVQIFDLMDAKARADCIKEIDLLKQ 88
Query: 165 LRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVL--FRRPENLEAAAPLNWEQRKKIIR 222
L H N+++ + +++L +V + L R++ F++ + L + W K
Sbjct: 89 LNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTV-W----KYFV 143
Query: 223 GLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSAR 282
L +AL ++H + +++HRD+K +NV + + +LGD GL R+ + +T++A
Sbjct: 144 QLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRF------FSSKTTAAH 194
Query: 283 NHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ + GT Y+ PE + KSD++S G ++ E+ +
Sbjct: 195 S----------LVGTPYYMSPERIHENGY-NFKSDIWSLGCLLYEMAA 231
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 98/242 (40%), Gaps = 28/242 (11%)
Query: 554 RTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLL--FHNNHRIGHS 611
R E+ L +L H N+++ E E+ ++ + + LS ++ F R+
Sbjct: 76 RADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPE 135
Query: 612 ILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTR 671
W + L SA+ ++H + +V+HR+I + + + +LG L F +
Sbjct: 136 RTVWKY----FVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 188
Query: 672 NDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLP 731
T+ S+ G YMSPE I +D++S G ++ E+ Q F
Sbjct: 189 K-------TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP--FYGD 239
Query: 732 EGLLVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQIL 791
+ L + E P L ++ +EL +L+ + C +PE RP + +
Sbjct: 240 KMNLYSLCKKIEQCDYP-------PLPSDHYSEELRQLVNM---CINPDPEKRPDVTYVY 289
Query: 792 SI 793
+
Sbjct: 290 DV 291
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 96/223 (43%), Gaps = 31/223 (13%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRNLVRL 173
+ +G G F KV A G VA+K + + +K F E+ + L H N+V+L
Sbjct: 18 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKL 76
Query: 174 RGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHE 233
E L L+ +Y + + L A + ++ + R + +A+ Y H+
Sbjct: 77 FEVIETEKTLYLIMEYASGGEVF-------DYLVAHGRMKEKEARSKFRQIVSAVQYCHQ 129
Query: 234 QLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTR 293
+ +I+HRD+K N++LD+ N ++ DFG + T + F
Sbjct: 130 K---RIVHRDLKAENLLLDADMNIKIADFGFSNEF---------TVGGKLDTF------- 170
Query: 294 IGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
G+ Y PE FQ + DV+S G+++ +VSG D
Sbjct: 171 -CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 79/179 (44%), Gaps = 20/179 (11%)
Query: 551 PALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY-SATRILSHLLFHNNHRIG 609
P + E++ + L H N+V+L + + +I +Y S + +L +
Sbjct: 52 PTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYL-------VA 104
Query: 610 HSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFL 669
H ++ + + + SA+ Y H++ +++HR++ + + LD DMN ++ F +
Sbjct: 105 HGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEF 161
Query: 670 TRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATS-MADVYSFGVVVLEVVTGQMAVD 727
T G G+ Y +PE + + DV+S GV++ +V+G + D
Sbjct: 162 TVG--GKLDTFCGSPP------YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 95/213 (44%), Gaps = 28/213 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
+G G G V A G VAVK + + ++ + E+V + H N+V + +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
D+L +V +++ +L ++ +N EQ + + AL YLH Q
Sbjct: 113 VGDELWVVMEFLEGGALTDIV--------THTRMNEEQIATVCLSVLRALSYLHNQ---G 161
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
+IHRD+K+ +++L S +L DFG + E + + + GT
Sbjct: 162 VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE----------------VPKRKXLVGTP 205
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
++ PE + T + D++S GI+V+E++ G
Sbjct: 206 YWMAPEVISRLPYGT-EVDIWSLGIMVIEMIDG 237
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 81/184 (44%), Gaps = 18/184 (9%)
Query: 540 VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSH 599
V VK++ + K R NE+ + H N+V + E+ V+ ++ L+
Sbjct: 73 VAVKKMDLRK-QQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTD 131
Query: 600 LLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPR 659
+ + H+ + + S+ A+ YLH N+ VIHR+I S +I L D +
Sbjct: 132 I-------VTHTRMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIK 181
Query: 660 LGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEV 719
L F ++ K + + G +M+PE I + D++S G++V+E+
Sbjct: 182 LSDFGFCAQVS-------KEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEM 234
Query: 720 VTGQ 723
+ G+
Sbjct: 235 IDGE 238
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 103/232 (44%), Gaps = 29/232 (12%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
F+ + LG GGFG V+ A D A+K + E + E+ A+A L H +V
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 172 R-LRGWCVHEDQLLL------VYDYMPNRSLDRVLFRRPENLE--AAAPLNWEQRKK--- 219
R W L VY Y+ ++ R ENL+ E+R++
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYI------QMQLCRKENLKDWMNGRCTIEERERSVC 120
Query: 220 --IIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMR 277
I +A A+ +LH + ++HRD+K SN+ ++GDFGL ++ + + Q
Sbjct: 121 LHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 278 TSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVV 329
+ + H + GT Y+ PE G+ + K D+FS G+++ E++
Sbjct: 178 LTPMPAYARHTGQV----GTKLYMSPEQIH-GNSYSHKVDIFSLGLILFELL 224
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 94/228 (41%), Gaps = 28/228 (12%)
Query: 513 NNFSESQRVAEMDFGTAYQGF--LDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHR 570
+F Q + FG ++ +D+ Y +KR+ + R + E++ LA+L H
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYA-IKRIRLPNRELAREKVMREVKALAKLEHP 63
Query: 571 NLVQ-LCGWCTE------QGEMLVIYDYSATRILSHLLFHNNHRI---GHSILQWHHR-- 618
+V+ W + Q +Y Y I L N + G ++ R
Sbjct: 64 GIVRYFNAWLEKNTTEKLQPSSPKVYLY----IQMQLCRKENLKDWMNGRCTIEERERSV 119
Query: 619 -YNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHR 677
+I +A A+ +LH ++ ++HR++ S I D ++G F L + +++
Sbjct: 120 CLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 176
Query: 678 KATSGNRSVR-----GIFGYMSPEYIESGEATSMADVYSFGVVVLEVV 720
T R G YMSPE I + D++S G+++ E++
Sbjct: 177 VLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 31/223 (13%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRNLVRL 173
+ +G G F KV A G VAVK + + +K F E+ + L H N+V+L
Sbjct: 21 KTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKL 79
Query: 174 RGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHE 233
E L LV +Y + + L A + ++ + R + +A+ Y H+
Sbjct: 80 FEVIETEKTLYLVMEYASGGEVF-------DYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 132
Query: 234 QLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTR 293
+ I+HRD+K N++LD N ++ DFG + E + ++ T
Sbjct: 133 KY---IVHRDLKAENLLLDGDMNIKIADFGFSN--EFTVGNKLDT--------------- 172
Query: 294 IGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
G+ Y PE FQ + DV+S G+++ +VSG D
Sbjct: 173 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 84/182 (46%), Gaps = 26/182 (14%)
Query: 551 PALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY-SATRILSHLLFHNNHRIG 609
P + E++ + L H N+V+L + + ++ +Y S + +L+ H +
Sbjct: 55 PTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK 114
Query: 610 HSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALA-EF 668
+ ++ + + SA+ Y H+++ ++HR++ + + LD DMN ++ F + EF
Sbjct: 115 EARAKF-------RQIVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEF 164
Query: 669 LTRNDHGHRKATSGNR--SVRGIFGYMSPEYIESGEATSM-ADVYSFGVVVLEVVTGQMA 725
T GN+ + G Y +PE + + DV+S GV++ +V+G +
Sbjct: 165 -----------TVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 213
Query: 726 VD 727
D
Sbjct: 214 FD 215
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 115/261 (44%), Gaps = 41/261 (15%)
Query: 72 TPRKEHSGLFHDMEGVQMSEKVGGDNPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAV 131
+P++E + H+ + V +PR SY + +I +G G G V A
Sbjct: 46 SPQREPQRVSHEQFRAALQLVVDPGDPR--SYLDNFIK---------IGEGSTGIVCIAT 94
Query: 132 LPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMP 191
+ S G +VAVK + + ++ + E+V + +H N+V + + D+L +V +++
Sbjct: 95 VRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 154
Query: 192 NRSL-DRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVM 250
+L D V R +N EQ + + AL LH Q +IHRD+K+ +++
Sbjct: 155 GGALTDIVTHTR---------MNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSIL 202
Query: 251 LDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGS 310
L +L DFG + E+ + + GT ++ PE +
Sbjct: 203 LTHDGRVKLSDFGFCAQVSKEVPRR----------------KXLVGTPYWMAPELISRLP 246
Query: 311 VATAKSDVFSFGIVVLEVVSG 331
+ D++S GI+V+E+V G
Sbjct: 247 YG-PEVDIWSLGIMVIEMVDG 266
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 82/189 (43%), Gaps = 24/189 (12%)
Query: 538 QYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRIL 597
+ V VK++ + K R NE+ + +H N+V++ E+ V+ ++ L
Sbjct: 100 KLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 158
Query: 598 SHLLFH---NNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDP 654
+ ++ H N +I L ++ A+ LH + VIHR+I S +I L
Sbjct: 159 TDIVTHTRMNEEQIAAVCL----------AVLQALSVLHAQG---VIHRDIKSDSILLTH 205
Query: 655 DMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGV 714
D +L F ++ K + + G +M+PE I D++S G+
Sbjct: 206 DGRVKLSDFGFCAQVS-------KEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGI 258
Query: 715 VVLEVVTGQ 723
+V+E+V G+
Sbjct: 259 MVIEMVDGE 267
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 115/261 (44%), Gaps = 41/261 (15%)
Query: 72 TPRKEHSGLFHDMEGVQMSEKVGGDNPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAV 131
+P++E + H+ + V +PR SY + +I +G G G V A
Sbjct: 123 SPQREPQRVSHEQFRAALQLVVDPGDPR--SYLDNFIK---------IGEGSTGIVCIAT 171
Query: 132 LPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMP 191
+ S G +VAVK + + ++ + E+V + +H N+V + + D+L +V +++
Sbjct: 172 VRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 231
Query: 192 NRSL-DRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVM 250
+L D V R +N EQ + + AL LH Q +IHRD+K+ +++
Sbjct: 232 GGALTDIVTHTR---------MNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSIL 279
Query: 251 LDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGS 310
L +L DFG + E+ + + GT ++ PE +
Sbjct: 280 LTHDGRVKLSDFGFCAQVSKEVPRR----------------KXLVGTPYWMAPELISRLP 323
Query: 311 VATAKSDVFSFGIVVLEVVSG 331
+ D++S GI+V+E+V G
Sbjct: 324 YG-PEVDIWSLGIMVIEMVDG 343
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 82/189 (43%), Gaps = 24/189 (12%)
Query: 538 QYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRIL 597
+ V VK++ + K R NE+ + +H N+V++ E+ V+ ++ L
Sbjct: 177 KLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 235
Query: 598 SHLLFH---NNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDP 654
+ ++ H N +I L ++ A+ LH + VIHR+I S +I L
Sbjct: 236 TDIVTHTRMNEEQIAAVCL----------AVLQALSVLHAQG---VIHRDIKSDSILLTH 282
Query: 655 DMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGV 714
D +L F ++ K + + G +M+PE I D++S G+
Sbjct: 283 DGRVKLSDFGFCAQVS-------KEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGI 335
Query: 715 VVLEVVTGQ 723
+V+E+V G+
Sbjct: 336 MVIEMVDGE 344
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 105/220 (47%), Gaps = 32/220 (14%)
Query: 117 EVLGSGGFGKVYRAVLPSDG----TVVAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLV 171
+VLGSG FG VY+ + DG VA+K L E + K E +A + +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSL-DRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
RL G C+ + LV MP L D V R L + LNW + +A + Y
Sbjct: 83 RLLGICLTS-TVQLVTQLMPYGCLLDHVRENR-GRLGSQDLLNWCMQ------IAKGMSY 134
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
L + +++HRD+ NV++ S + ++ DFGLAR L+ + ++H A+
Sbjct: 135 LED---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDID-----------ETEYH-AD 179
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
++ I ++ ES + T +SDV+S+G+ V E+++
Sbjct: 180 GGKV--PIKWMALESILRRRF-THQSDVWSYGVTVWELMT 216
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 113/277 (40%), Gaps = 43/277 (15%)
Query: 526 FGTAYQGFL----DNHQY-VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCT 580
FGT Y+G +N + V +K L + P +E +A + + +L G C
Sbjct: 30 FGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICL 89
Query: 581 EQGEMLVIYDYSATRILSHLLFHNNHRIG-HSILQWHHRYNIIKSLASAILYLHEEWNEQ 639
LV +L H+ N R+G +L W + +A + YL + +
Sbjct: 90 TSTVQLVTQLMPYGCLLDHVR-ENRGRLGSQDLLNWCMQ------IAKGMSYLE---DVR 139
Query: 640 VIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIE 699
++HR++ + + + + ++ F LA L D A G ++ +M+ E I
Sbjct: 140 LVHRDLAARNVLVKSPNHVKITDFGLARLLD-IDETEYHADGGKVPIK----WMALESIL 194
Query: 700 SGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSLN 758
T +DV+S+GV V E++T G D G+ P E+ DL
Sbjct: 195 RRRFTHQSDVWSYGVTVWELMTFGAKPYD-----GI-------------PAREIPDLLEK 236
Query: 759 GEYNHKELMRLIK---LGIACTLSNPELRPSMRQILS 792
GE + + I + + C + + E RP R+++S
Sbjct: 237 GERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVS 273
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 32/224 (14%)
Query: 113 FDEDEVLGSGGFGKVY---RAVLPSDGTVVAVKCLAEKGERFEKTFAAELV--AVAHLRH 167
F+ +VLG G FGKV+ + P G + A+K L + + ++ +A + H
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNH 89
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+V+L E +L L+ D++ R D LF R L E K + LA
Sbjct: 90 PFVVKLHYAFQTEGKLYLILDFL--RGGD--LFTR---LSKEVMFTEEDVKFYLAELALG 142
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L +LH II+RD+K N++LD + + +L DFGL++ A +H+
Sbjct: 143 LDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK-------------EAIDHE-- 184
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
+ GT+ Y+ PE + + + +D +S+G+++ E+++G
Sbjct: 185 -KKAYSFCGTVEYMAPEVVNRQGHSHS-ADWWSYGVLMFEMLTG 226
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 26/176 (14%)
Query: 554 RTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSA-----TRILSHLLFHNNHRI 608
R R E LA + H +V+L +G++ +I D+ TR+ ++F
Sbjct: 74 RVRTKMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEE--- 130
Query: 609 GHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEF 668
++ LA L L + +I+R++ I LD + + +L F L++
Sbjct: 131 -----------DVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK- 178
Query: 669 LTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQM 724
DH +KA S G YM+PE + + AD +S+GV++ E++TG +
Sbjct: 179 -EAIDH-EKKAYS----FCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSL 228
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 98/220 (44%), Gaps = 33/220 (15%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAEL-VAVAHLRHRNLVR 172
+V+G G FGKV A ++ AVK L +K ++ EK +E V + +++H LV
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 173 LRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
L D+L V DY+ L L R LE A + +A+AL YLH
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAE-------IASALGYLH 156
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARW-LEHELQYQMRTSSARNHQFHLAET 291
I++RD+K N++LDSQ + L DFGL + +EH + T
Sbjct: 157 S---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN-----------------STT 196
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
+ GT YL PE K D + G V+ E++ G
Sbjct: 197 STFCGTPEYLAPEVLHKQPYDRT-VDWWCLGAVLYEMLYG 235
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 95/223 (42%), Gaps = 31/223 (13%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKTFAAELVAVAHLRHRNLVRL 173
+ +G G F KV A G VA+K + + +K F E+ + L H N+V+L
Sbjct: 21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKL 79
Query: 174 RGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHE 233
E L L+ +Y + + L A + ++ + R + +A+ Y H+
Sbjct: 80 FEVIETEKTLYLIMEYASGGEVF-------DYLVAHGRMKEKEARSKFRQIVSAVQYCHQ 132
Query: 234 QLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTR 293
+ +I+HRD+K N++LD+ N ++ DFG + T + F
Sbjct: 133 K---RIVHRDLKAENLLLDADMNIKIADFGFSNEF---------TVGGKLDAF------- 173
Query: 294 IGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
G Y PE FQ + DV+S G+++ +VSG D
Sbjct: 174 -CGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 79/179 (44%), Gaps = 20/179 (11%)
Query: 551 PALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY-SATRILSHLLFHNNHRIG 609
P + E++ + L H N+V+L + + +I +Y S + +L +
Sbjct: 55 PTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYL-------VA 107
Query: 610 HSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFL 669
H ++ + + + SA+ Y H++ +++HR++ + + LD DMN ++ F +
Sbjct: 108 HGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEF 164
Query: 670 TRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATS-MADVYSFGVVVLEVVTGQMAVD 727
T G A G Y +PE + + DV+S GV++ +V+G + D
Sbjct: 165 TVG--GKLDAFCGAPP------YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 25/225 (11%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
+D + LG G +G+V AV VAVK + ++ + E+ L H N+V
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
+ G H + + Y ++ S + R ++ P ++ L A + YL
Sbjct: 69 KFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP----DAQRFFHQLMAGVVYL 121
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
H I HRD+K N++LD + N ++ DFGLA T N++ L
Sbjct: 122 HG---IGITHRDIKPENLLLDERDNLKISDFGLA------------TVFRYNNRERL--L 164
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
++ GT+ Y+ PE ++ DV+S GIV+ +++G D
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 34/219 (15%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
EVLGSG F +V+ G + A+KC+ + + + E+ + ++H N+V L
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74
Query: 177 CVHEDQLLLVYDYMPNRSL-DRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQL 235
LV + L DR+L R E A L +I+ + +A+ YLHE
Sbjct: 75 YESTTHYYLVMQLVSGGELFDRIL-ERGVYTEKDASL-------VIQQVLSAVKYLHEN- 125
Query: 236 ETQIIHRDVKTSNVM-LDSQYNAR--LGDFGLARWLEHELQYQMRTSSARNHQFHLAETT 292
I+HRD+K N++ L + N++ + DFGL++ ++ + M T+
Sbjct: 126 --GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI---MSTAC------------ 168
Query: 293 RIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
GT GY+ PE + + A D +S G++ ++ G
Sbjct: 169 ---GTPGYVAPEVLAQKPYSKA-VDCWSIGVITYILLCG 203
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 83/180 (46%), Gaps = 22/180 (12%)
Query: 547 MSKCPALR-TRFSNELQNLARLRHRNLVQLCG-WCTEQGEMLVIYDYSATRILSHLLFHN 604
+ K PA R + NE+ L +++H N+V L + + LV+ S + +L
Sbjct: 42 IKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERG 101
Query: 605 NHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNIT-SSAITLDPDMNPRLGSF 663
+ + L +I+ + SA+ YLHE ++HR++ + + L P+ N ++
Sbjct: 102 VYTEKDASL-------VIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKI--- 148
Query: 664 ALAEF-LTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
+ +F L++ + +T+ G GY++PE + + D +S GV+ ++ G
Sbjct: 149 MITDFGLSKMEQNGIMSTAC-----GTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 105/221 (47%), Gaps = 38/221 (17%)
Query: 119 LGSGGFGKVYRAV-LPSDGTVVAVKCL-AEKGER-FEKTFAAELVAVAHLR---HRNLVR 172
+G G +GKV++A L + G VA+K + + GE + E+ + HL H N+VR
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 173 LRGWCV-----HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
L C E +L LV++++ ++ L L + PE P E K ++ L
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPE---PGVPT--ETIKDMMFQLLRG 132
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L +LH +++HRD+K N+++ S +L DFGLAR + F
Sbjct: 133 LDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARI----------------YSFQ 173
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEV 328
+A T+ + T+ Y PE + S AT D++S G + E+
Sbjct: 174 MALTSVV-VTLWYRAPEVLLQSSYATP-VDLWSVGCIFAEM 212
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 99/215 (46%), Gaps = 28/215 (13%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
E +G G G VY A+ + G VA++ + + + ++ E++ + ++ N+V
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 177 CVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLE 236
+ D+L +V +Y+ SL V+ ++ Q + R AL +LH
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVV--------TETCMDEGQIAAVCRECLQALEFLH---S 135
Query: 237 TQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGG 296
Q+IHR++K+ N++L + +L DFG + E Q + S+ + G
Sbjct: 136 NQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPE---QSKRST-------------MVG 179
Query: 297 TIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T ++ PE + + K D++S GI+ +E++ G
Sbjct: 180 TPYWMAPEVVTRKAYG-PKVDIWSLGIMAIEMIEG 213
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 90/210 (42%), Gaps = 19/210 (9%)
Query: 515 FSESQRVAEMDFGTAYQGF-LDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLV 573
++ +++ + GT Y + Q V ++++ + + P + NE+ + ++ N+V
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK-KELIINEILVMRENKNPNIV 81
Query: 574 QLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLH 633
E+ V+ +Y A L+ + + + + + + A+ +LH
Sbjct: 82 NYLDSYLVGDELWVVMEYLAGGSLTDV-------VTETCMDEGQIAAVCRECLQALEFLH 134
Query: 634 EEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYM 693
+ QVIHRNI S I L D + +L F +T S ++ G +M
Sbjct: 135 ---SNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQ-------SKRSTMVGTPYWM 184
Query: 694 SPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
+PE + D++S G++ +E++ G+
Sbjct: 185 APEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 34/232 (14%)
Query: 106 LYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEK--TFAAE---LV 160
+++ N F ++G GGFG+VY G + A+KCL +K + ++ T A ++
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 161 AVAHLRHRNLVRLRGWCVH-EDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKK 219
++ + + H D+L + D M L L + EA +
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAE--- 300
Query: 220 IIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTS 279
II G L ++H + +++RD+K +N++LD + R+ D GLA
Sbjct: 301 IILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-------------- 339
Query: 280 SARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
F + GT GY+ PE QKG + +D FS G ++ +++ G
Sbjct: 340 ----CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 626 ASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALA-EFLTRNDHGHRKATSGNR 684
A IL L N V++R++ + I LD + R+ LA +F + H
Sbjct: 299 AEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA--------- 349
Query: 685 SVRGIFGYMSPEYIESGEA-TSMADVYSFGVVVLEVVTG 722
SV G GYM+PE ++ G A S AD +S G ++ +++ G
Sbjct: 350 SV-GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 34/232 (14%)
Query: 106 LYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEK--TFAAE---LV 160
+++ N F ++G GGFG+VY G + A+KCL +K + ++ T A ++
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 242
Query: 161 AVAHLRHRNLVRLRGWCVH-EDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKK 219
++ + + H D+L + D M L L + EA +
Sbjct: 243 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAE--- 299
Query: 220 IIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTS 279
II G L ++H + +++RD+K +N++LD + R+ D GLA
Sbjct: 300 IILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-------------- 338
Query: 280 SARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
F + GT GY+ PE QKG + +D FS G ++ +++ G
Sbjct: 339 ----CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 626 ASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALA-EFLTRNDHGHRKATSGNR 684
A IL L N V++R++ + I LD + R+ LA +F + H
Sbjct: 298 AEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA--------- 348
Query: 685 SVRGIFGYMSPEYIESGEA-TSMADVYSFGVVVLEVVTG 722
SV G GYM+PE ++ G A S AD +S G ++ +++ G
Sbjct: 349 SV-GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 30/215 (13%)
Query: 119 LGSGGFGKVYRAVLPSD---GTVVAVK-CLAEKGERFEKTFAAELVAVAHLRHRNLVRLR 174
+G G FG V++ + S VA+K C + + F E + + H ++V+L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 175 GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQ 234
G + E+ + ++ + L L R +L+ A+ + + + L+ AL YL +
Sbjct: 78 G-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ------LSTALAYLESK 130
Query: 235 LETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRI 294
+ +HRD+ NV++ S +LGDFGL+R++E Y+
Sbjct: 131 ---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL------------- 174
Query: 295 GGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVV 329
I ++ PES +A SDV+ FG+ + E++
Sbjct: 175 --PIKWMAPESINFRRFTSA-SDVWMFGVCMWEIL 206
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 95/204 (46%), Gaps = 19/204 (9%)
Query: 521 VAEMDFGTAYQGFL----DNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLC 576
+ E FG +QG + V +K ++R +F E + + H ++V+L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 577 GWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEW 636
G TE +++ + + S L S++ + ++ L++A+ YL
Sbjct: 78 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ------LSTALAYLE--- 128
Query: 637 NEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPE 696
+++ +HR+I + + + + +LG F L+ ++ D + KA+ G ++ +M+PE
Sbjct: 129 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIK----WMAPE 182
Query: 697 YIESGEATSMADVYSFGVVVLEVV 720
I TS +DV+ FGV + E++
Sbjct: 183 SINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 25/225 (11%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
+D + LG G +G+V AV VAVK + ++ + E+ L H N+V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
+ G H + + Y ++ S + R ++ P ++ L A + YL
Sbjct: 68 KFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP----DAQRFFHQLMAGVVYL 120
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
H I HRD+K N++LD + N ++ DFGLA T N++ L
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLA------------TVFRYNNRERL--L 163
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
++ GT+ Y+ PE ++ DV+S GIV+ +++G D
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 30/215 (13%)
Query: 119 LGSGGFGKVYRAVLPSD---GTVVAVK-CLAEKGERFEKTFAAELVAVAHLRHRNLVRLR 174
+G G FG V++ + S VA+K C + + F E + + H ++V+L
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 175 GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQ 234
G + E+ + ++ + L L R +L+ A+ + + + L+ AL YL +
Sbjct: 106 G-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ------LSTALAYLESK 158
Query: 235 LETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRI 294
+ +HRD+ NV++ S +LGDFGL+R++E Y+
Sbjct: 159 ---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL------------- 202
Query: 295 GGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVV 329
I ++ PES +A SDV+ FG+ + E++
Sbjct: 203 --PIKWMAPESINFRRFTSA-SDVWMFGVCMWEIL 234
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 107/236 (45%), Gaps = 27/236 (11%)
Query: 497 VETPREISFKEIISATNNFSESQR--------VAEMDFGTAYQGFLDNHQ----YVLVKR 544
+ T + F+ + ++ E QR + E FG +QG + + V +K
Sbjct: 14 IPTTENLYFQGAMGSSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKT 73
Query: 545 LGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN 604
++R +F E + + H ++V+L G TE +++ + + S L
Sbjct: 74 CKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRK 133
Query: 605 NHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFA 664
S++ + ++ L++A+ YL +++ +HR+I + + + + +LG F
Sbjct: 134 YSLDLASLILYAYQ------LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFG 184
Query: 665 LAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVV 720
L+ ++ D + KA+ G ++ +M+PE I TS +DV+ FGV + E++
Sbjct: 185 LSRYM--EDSTYYKASKGKLPIK----WMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 30/216 (13%)
Query: 118 VLGSGGFGKVYRAVLPSD---GTVVAVK-CLAEKGERFEKTFAAELVAVAHLRHRNLVRL 173
+G G FG V++ + S VA+K C + + F E + + H ++V+L
Sbjct: 20 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 79
Query: 174 RGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHE 233
G + E+ + ++ + L L R +L+ A+ + + + L+ AL YL
Sbjct: 80 IG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ------LSTALAYLES 132
Query: 234 QLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTR 293
+ + +HRD+ NV++ S +LGDFGL+R++E Y+
Sbjct: 133 K---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL------------ 177
Query: 294 IGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVV 329
I ++ PES +A SDV+ FG+ + E++
Sbjct: 178 ---PIKWMAPESINFRRFTSA-SDVWMFGVCMWEIL 209
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 96/204 (47%), Gaps = 19/204 (9%)
Query: 521 VAEMDFGTAYQGFLDNHQ----YVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLC 576
+ E FG +QG + + V +K ++R +F E + + H ++V+L
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 577 GWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEW 636
G TE +++ + + S L S++ + ++ L++A+ YL
Sbjct: 81 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ------LSTALAYLE--- 131
Query: 637 NEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPE 696
+++ +HR+I + + + + +LG F L+ ++ D + KA+ G ++ +M+PE
Sbjct: 132 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIK----WMAPE 185
Query: 697 YIESGEATSMADVYSFGVVVLEVV 720
I TS +DV+ FGV + E++
Sbjct: 186 SINFRRFTSASDVWMFGVCMWEIL 209
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 25/225 (11%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
+D + LG G +G+V AV VAVK + ++ + E+ L H N+V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
+ G H + + Y ++ S + R ++ P ++ L A + YL
Sbjct: 68 KFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP----DAQRFFHQLMAGVVYL 120
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
H I HRD+K N++LD + N ++ DFGLA T N++ L
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLA------------TVFRYNNRERL--L 163
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
++ GT+ Y+ PE ++ DV+S GIV+ +++G D
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 118/261 (45%), Gaps = 52/261 (19%)
Query: 106 LYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHL 165
LY S EV G FG V++A L ++ V + + +K + ++ + E+ ++ +
Sbjct: 19 LYFQSMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDK-QSWQNEY--EVYSLPGM 75
Query: 166 RHRNLVRL-----RGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKI 220
+H N+++ RG V D L L+ + SL L A ++W + I
Sbjct: 76 KHENILQFIGAEKRGTSVDVD-LWLITAFHEKGSLSDFL--------KANVVSWNELCHI 126
Query: 221 IRGLAAALHYLHEQL-------ETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQ 273
+A L YLHE + + I HRD+K+ NV+L + A + DFGLA L+
Sbjct: 127 AETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA------LK 180
Query: 274 YQMRTSSARNHQFHLAETTRIGGTIG---YLPPESFQKGSV-----ATAKSDVFSFGIVV 325
++ S+ H G +G Y+ PE + G++ A + D+++ G+V+
Sbjct: 181 FEAGKSAGDTH-----------GQVGTRRYMAPEVLE-GAINFQRDAFLRIDMYAMGLVL 228
Query: 326 LEVVSGRRAVDLTYPDDQIIL 346
E+ S A D P D+ +L
Sbjct: 229 WELASRCTAAD--GPVDEYML 247
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 100/228 (43%), Gaps = 35/228 (15%)
Query: 526 FGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQG-- 583
FG ++ L N +YV VK + + + + E+ +L ++H N++Q G ++G
Sbjct: 37 FGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIG-AEKRGTS 92
Query: 584 ---EMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEW---- 636
++ +I + LS L N ++ W+ +I +++A + YLHE+
Sbjct: 93 VDVDLWLITAFHEKGSLSDFLKAN-------VVSWNELCHIAETMARGLAYLHEDIPGLK 145
Query: 637 ---NEQVIHRNITSSAITLDPDMNPRLGSFALA-EFLTRNDHGHRKATSGNRSVRGIFGY 692
+ HR+I S + L ++ + F LA +F G G R Y
Sbjct: 146 DGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRR------Y 199
Query: 693 MSPEYIESG-----EATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLL 735
M+PE +E +A D+Y+ G+V+ E+ + A D + E +L
Sbjct: 200 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYML 247
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 30/215 (13%)
Query: 119 LGSGGFGKVYRAVLPSD---GTVVAVK-CLAEKGERFEKTFAAELVAVAHLRHRNLVRLR 174
+G G FG V++ + S VA+K C + + F E + + H ++V+L
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 175 GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQ 234
G + E+ + ++ + L L R +L+ A+ + + + L+ AL YL +
Sbjct: 83 G-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ------LSTALAYLESK 135
Query: 235 LETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRI 294
+ +HRD+ NV++ S +LGDFGL+R++E Y+
Sbjct: 136 ---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL------------- 179
Query: 295 GGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVV 329
I ++ PES +A SDV+ FG+ + E++
Sbjct: 180 --PIKWMAPESINFRRFTSA-SDVWMFGVCMWEIL 211
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 96/204 (47%), Gaps = 19/204 (9%)
Query: 521 VAEMDFGTAYQGFLDNHQ----YVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLC 576
+ E FG +QG + + V +K ++R +F E + + H ++V+L
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 577 GWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEW 636
G TE +++ + + S L S++ + ++ L++A+ YL
Sbjct: 83 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ------LSTALAYLE--- 133
Query: 637 NEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPE 696
+++ +HR+I + + + + +LG F L+ ++ D + KA+ G ++ +M+PE
Sbjct: 134 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIK----WMAPE 187
Query: 697 YIESGEATSMADVYSFGVVVLEVV 720
I TS +DV+ FGV + E++
Sbjct: 188 SINFRRFTSASDVWMFGVCMWEIL 211
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 25/225 (11%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
+D + LG G +G+V AV VAVK + ++ + E+ L H N+V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
+ G H + + Y ++ S + R ++ P ++ L A + YL
Sbjct: 68 KFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP----DAQRFFHQLMAGVVYL 120
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
H I HRD+K N++LD + N ++ DFGLA T N++ L
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLA------------TVFRYNNRERL--L 163
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
++ GT+ Y+ PE ++ DV+S GIV+ +++G D
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 105/221 (47%), Gaps = 38/221 (17%)
Query: 119 LGSGGFGKVYRAV-LPSDGTVVAVKCL-AEKGER-FEKTFAAELVAVAHLR---HRNLVR 172
+G G +GKV++A L + G VA+K + + GE + E+ + HL H N+VR
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 173 LRGWCV-----HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
L C E +L LV++++ ++ L L + PE P E K ++ L
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPE---PGVPT--ETIKDMMFQLLRG 132
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L +LH +++HRD+K N+++ S +L DFGLAR + F
Sbjct: 133 LDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARI----------------YSFQ 173
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEV 328
+A T+ + T+ Y PE + S AT D++S G + E+
Sbjct: 174 MALTSVV-VTLWYRAPEVLLQSSYATP-VDLWSVGCIFAEM 212
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 25/225 (11%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
+D + LG G +G+V AV VAVK + ++ + E+ L H N+V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
+ G H + + Y ++ S + R ++ P ++ L A + YL
Sbjct: 68 KFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP----DAQRFFHQLMAGVVYL 120
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
H I HRD+K N++LD + N ++ DFGLA T N++ L
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLA------------TVFRYNNRERL--L 163
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
++ GT+ Y+ PE ++ DV+S GIV+ +++G D
Sbjct: 164 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 105/221 (47%), Gaps = 38/221 (17%)
Query: 119 LGSGGFGKVYRAV-LPSDGTVVAVKCL-AEKGER-FEKTFAAELVAVAHLR---HRNLVR 172
+G G +GKV++A L + G VA+K + + GE + E+ + HL H N+VR
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 173 LRGWCV-----HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
L C E +L LV++++ ++ L L + PE P E K ++ L
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPE---PGVPT--ETIKDMMFQLLRG 132
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L +LH +++HRD+K N+++ S +L DFGLAR + F
Sbjct: 133 LDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARI----------------YSFQ 173
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEV 328
+A T+ + T+ Y PE + S AT D++S G + E+
Sbjct: 174 MALTSVV-VTLWYRAPEVLLQSSYATP-VDLWSVGCIFAEM 212
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 30/215 (13%)
Query: 119 LGSGGFGKVYRAVLPSD---GTVVAVK-CLAEKGERFEKTFAAELVAVAHLRHRNLVRLR 174
+G G FG V++ + S VA+K C + + F E + + H ++V+L
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 175 GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQ 234
G + E+ + ++ + L L R +L+ A+ + + + L+ AL YL +
Sbjct: 75 G-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ------LSTALAYLESK 127
Query: 235 LETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRI 294
+ +HRD+ NV++ S +LGDFGL+R++E Y+
Sbjct: 128 ---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL------------- 171
Query: 295 GGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVV 329
I ++ PES +A SDV+ FG+ + E++
Sbjct: 172 --PIKWMAPESINFRRFTSA-SDVWMFGVCMWEIL 203
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 96/204 (47%), Gaps = 19/204 (9%)
Query: 521 VAEMDFGTAYQGFLDNHQ----YVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLC 576
+ E FG +QG + + V +K ++R +F E + + H ++V+L
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 577 GWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEW 636
G TE +++ + + S L S++ + ++ L++A+ YL
Sbjct: 75 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ------LSTALAYLE--- 125
Query: 637 NEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPE 696
+++ +HR+I + + + + +LG F L+ ++ D + KA+ G ++ +M+PE
Sbjct: 126 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIK----WMAPE 179
Query: 697 YIESGEATSMADVYSFGVVVLEVV 720
I TS +DV+ FGV + E++
Sbjct: 180 SINFRRFTSASDVWMFGVCMWEIL 203
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 34/232 (14%)
Query: 106 LYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEK--TFAAE---LV 160
+++ N F ++G GGFG+VY G + A+KCL +K + ++ T A ++
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 161 AVAHLRHRNLVRLRGWCVH-EDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKK 219
++ + + H D+L + D M L L + EA +
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAE--- 300
Query: 220 IIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTS 279
II G L ++H + +++RD+K +N++LD + R+ D GLA
Sbjct: 301 IILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-------------- 339
Query: 280 SARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
F + GT GY+ PE QKG + +D FS G ++ +++ G
Sbjct: 340 ----CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 626 ASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALA-EFLTRNDHGHRKATSGNR 684
A IL L N V++R++ + I LD + R+ LA +F + H
Sbjct: 299 AEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA--------- 349
Query: 685 SVRGIFGYMSPEYIESGEA-TSMADVYSFGVVVLEVVTG 722
SV G GYM+PE ++ G A S AD +S G ++ +++ G
Sbjct: 350 SV-GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 34/232 (14%)
Query: 106 LYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEK--TFAAE---LV 160
+++ N F ++G GGFG+VY G + A+KCL +K + ++ T A ++
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 161 AVAHLRHRNLVRLRGWCVH-EDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKK 219
++ + + H D+L + D M L L + EA +
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAE--- 300
Query: 220 IIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTS 279
II G L ++H + +++RD+K +N++LD + R+ D GLA
Sbjct: 301 IILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-------------- 339
Query: 280 SARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
F + GT GY+ PE QKG + +D FS G ++ +++ G
Sbjct: 340 ----CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 626 ASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALA-EFLTRNDHGHRKATSGNR 684
A IL L N V++R++ + I LD + R+ LA +F + H
Sbjct: 299 AEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA--------- 349
Query: 685 SVRGIFGYMSPEYIESGEA-TSMADVYSFGVVVLEVVTG 722
SV G GYM+PE ++ G A S AD +S G ++ +++ G
Sbjct: 350 SV-GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 30/215 (13%)
Query: 119 LGSGGFGKVYRAVLPSD---GTVVAVK-CLAEKGERFEKTFAAELVAVAHLRHRNLVRLR 174
+G G FG V++ + S VA+K C + + F E + + H ++V+L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 175 GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQ 234
G + E+ + ++ + L L R +L+ A+ + + + L+ AL YL +
Sbjct: 78 G-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ------LSTALAYLESK 130
Query: 235 LETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRI 294
+ +HRD+ NV++ S +LGDFGL+R++E Y+
Sbjct: 131 ---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL------------- 174
Query: 295 GGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVV 329
I ++ PES +A SDV+ FG+ + E++
Sbjct: 175 --PIKWMAPESINFRRFTSA-SDVWMFGVCMWEIL 206
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 96/204 (47%), Gaps = 19/204 (9%)
Query: 521 VAEMDFGTAYQGFLDNHQ----YVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLC 576
+ E FG +QG + + V +K ++R +F E + + H ++V+L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 577 GWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEW 636
G TE +++ + + S L S++ + ++ L++A+ YL
Sbjct: 78 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ------LSTALAYLE--- 128
Query: 637 NEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPE 696
+++ +HR+I + + + + +LG F L+ ++ D + KA+ G ++ +M+PE
Sbjct: 129 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIK----WMAPE 182
Query: 697 YIESGEATSMADVYSFGVVVLEVV 720
I TS +DV+ FGV + E++
Sbjct: 183 SINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 30/214 (14%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
+G G G V A + S G +VAVK + + ++ + E+V + +H N+V + +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 179 HEDQLLLVYDYMPNRSL-DRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLET 237
D+L +V +++ +L D V R +N EQ + + AL LH Q
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHTR---------MNEEQIAAVCLAVLQALSVLHAQ--- 135
Query: 238 QIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGT 297
+IHRD+K+ +++L +L DFG + E+ + + GT
Sbjct: 136 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR----------------KXLVGT 179
Query: 298 IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
++ PE + + D++S GI+V+E+V G
Sbjct: 180 PYWMAPELISRLPYG-PEVDIWSLGIMVIEMVDG 212
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 82/189 (43%), Gaps = 24/189 (12%)
Query: 538 QYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRIL 597
+ V VK++ + K R NE+ + +H N+V++ E+ V+ ++ L
Sbjct: 46 KLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104
Query: 598 SHLLFH---NNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDP 654
+ ++ H N +I L ++ A+ LH + VIHR+I S +I L
Sbjct: 105 TDIVTHTRMNEEQIAAVCL----------AVLQALSVLHAQ---GVIHRDIKSDSILLTH 151
Query: 655 DMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGV 714
D +L F ++ K + + G +M+PE I D++S G+
Sbjct: 152 DGRVKLSDFGFCAQVS-------KEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGI 204
Query: 715 VVLEVVTGQ 723
+V+E+V G+
Sbjct: 205 MVIEMVDGE 213
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 30/214 (14%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
+G G G V A + S G +VAVK + + ++ + E+V + +H N+V + +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 179 HEDQLLLVYDYMPNRSL-DRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLET 237
D+L +V +++ +L D V R +N EQ + + AL LH Q
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTHTR---------MNEEQIAAVCLAVLQALSVLHAQ--- 139
Query: 238 QIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGT 297
+IHRD+K+ +++L +L DFG + E+ + + GT
Sbjct: 140 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR----------------KXLVGT 183
Query: 298 IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
++ PE + + D++S GI+V+E+V G
Sbjct: 184 PYWMAPELISRLPYG-PEVDIWSLGIMVIEMVDG 216
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 82/189 (43%), Gaps = 24/189 (12%)
Query: 538 QYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRIL 597
+ V VK++ + K R NE+ + +H N+V++ E+ V+ ++ L
Sbjct: 50 KLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 108
Query: 598 SHLLFH---NNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDP 654
+ ++ H N +I L ++ A+ LH + VIHR+I S +I L
Sbjct: 109 TDIVTHTRMNEEQIAAVCL----------AVLQALSVLHAQ---GVIHRDIKSDSILLTH 155
Query: 655 DMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGV 714
D +L F ++ K + + G +M+PE I D++S G+
Sbjct: 156 DGRVKLSDFGFCAQVS-------KEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGI 208
Query: 715 VVLEVVTGQ 723
+V+E+V G+
Sbjct: 209 MVIEMVDGE 217
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 25/225 (11%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
+D + LG G +G+V AV VAVK + ++ + E+ L H N+V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
+ G H + + Y ++ S + R ++ P ++ L A + YL
Sbjct: 68 KFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP----DAQRFFHQLMAGVVYL 120
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
H I HRD+K N++LD + N ++ DFGLA T N++ L
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLA------------TVFRYNNRERL--L 163
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
++ GT+ Y+ PE ++ DV+S GIV+ +++G D
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 25/225 (11%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
+D + LG G +G+V AV VAVK + ++ + E+ L H N+V
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 66
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
+ G H + + Y ++ S + R ++ P ++ L A + YL
Sbjct: 67 KFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP----DAQRFFHQLMAGVVYL 119
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
H I HRD+K N++LD + N ++ DFGLA T N++ L
Sbjct: 120 HG---IGITHRDIKPENLLLDERDNLKISDFGLA------------TVFRYNNRERL--L 162
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
++ GT+ Y+ PE ++ DV+S GIV+ +++G D
Sbjct: 163 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 30/215 (13%)
Query: 119 LGSGGFGKVYRAVLPSD---GTVVAVK-CLAEKGERFEKTFAAELVAVAHLRHRNLVRLR 174
+G G FG V++ + S VA+K C + + F E + + H ++V+L
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 175 GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQ 234
G + E+ + ++ + L L R +L+ A+ + + + L+ AL YL +
Sbjct: 80 G-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ------LSTALAYLESK 132
Query: 235 LETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRI 294
+ +HRD+ NV++ S +LGDFGL+R++E Y+
Sbjct: 133 ---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL------------- 176
Query: 295 GGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVV 329
I ++ PES +A SDV+ FG+ + E++
Sbjct: 177 --PIKWMAPESINFRRFTSA-SDVWMFGVCMWEIL 208
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 96/204 (47%), Gaps = 19/204 (9%)
Query: 521 VAEMDFGTAYQGFLDNHQ----YVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLC 576
+ E FG +QG + + V +K ++R +F E + + H ++V+L
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 577 GWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEW 636
G TE +++ + + S L S++ + ++ L++A+ YL
Sbjct: 80 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ------LSTALAYLE--- 130
Query: 637 NEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPE 696
+++ +HR+I + + + + +LG F L+ ++ D + KA+ G ++ +M+PE
Sbjct: 131 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIK----WMAPE 184
Query: 697 YIESGEATSMADVYSFGVVVLEVV 720
I TS +DV+ FGV + E++
Sbjct: 185 SINFRRFTSASDVWMFGVCMWEIL 208
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 25/225 (11%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
+D + LG G +G+V AV VAVK + ++ + E+ L H N+V
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
+ G H + + Y ++ S + R ++ P ++ L A + YL
Sbjct: 69 KFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP----DAQRFFHQLMAGVVYL 121
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
H I HRD+K N++LD + N ++ DFGLA T N++ L
Sbjct: 122 HG---IGITHRDIKPENLLLDERDNLKISDFGLA------------TVFRYNNRERL--L 164
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
++ GT+ Y+ PE ++ DV+S GIV+ +++G D
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 25/225 (11%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
+D + LG G +G+V AV VAVK + ++ + E+ L H N+V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
+ G H + + Y ++ S + R ++ P ++ L A + YL
Sbjct: 68 KFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP----DAQRFFHQLMAGVVYL 120
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
H I HRD+K N++LD + N ++ DFGLA T N++ L
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLA------------TVFRYNNRERL--L 163
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
++ GT+ Y+ PE ++ DV+S GIV+ +++G D
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 27/223 (12%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFE--KTFAAELVAVAHLRHRNLVRLR 174
E +G+G +G V A G VA+K + + K EL + H +H N++ ++
Sbjct: 61 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIK 120
Query: 175 GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLE----AAAPLNWEQRKKIIRGLAAALHY 230
D L Y +S+ VL +L ++ PL E + + L L Y
Sbjct: 121 ------DILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKY 174
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
+H Q+IHRD+K SN++++ ++GDFG+AR L +S HQ+ + E
Sbjct: 175 MHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGL---------CTSPAEHQYFMTE 222
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRR 333
T Y PE T D++S G + E+++ R+
Sbjct: 223 YV---ATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 18/172 (10%)
Query: 556 RFSNELQNLARLRHRNLV---QLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHS- 611
R EL+ L +H N++ + GE +Y ++ L+ + H+I HS
Sbjct: 100 RTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVY------VVLDLMESDLHQIIHSS 153
Query: 612 -ILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLT 670
L H + L + Y+H + QVIHR++ S + ++ + ++G F +A L
Sbjct: 154 QPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLC 210
Query: 671 RNDHGHRKATSGNRSVRGIFGYMSPEYIES-GEATSMADVYSFGVVVLEVVT 721
+ H+ + + R Y +PE + S E T D++S G + E++
Sbjct: 211 TSPAEHQYFMTEYVATR---WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 259
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 36/245 (14%)
Query: 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRN 169
+ F++ LG+G G V++ G V+A K + E EL +
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVL---FRRPENLEAAAPLNWEQRKKIIRGLAA 226
+V G + ++ + ++M SLD+VL R PE + + +I+GL
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI------AVIKGLT- 137
Query: 227 ALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQF 286
YL E+ +I+HRDVK SN++++S+ +L DFG++ Q+ S A +
Sbjct: 138 ---YLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSG--------QLIDSMANSFV- 183
Query: 287 HLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII- 345
GT Y+ PE Q G+ + +SD++S G+ ++E+ GR + I
Sbjct: 184 ---------GTRSYMSPERLQ-GTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFE 233
Query: 346 LLDWI 350
LLD+I
Sbjct: 234 LLDYI 238
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 92/212 (43%), Gaps = 21/212 (9%)
Query: 519 QRVAEMDFGTAYQGFLDNHQ---YVLVKRL-GMSKCPALRTRFSNELQNLARLRHRNLVQ 574
++++E+ G F +H+ V+ ++L + PA+R + ELQ L +V
Sbjct: 28 EKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVG 87
Query: 575 LCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHE 634
G GE+ + ++ L +L RI IL +IK L YL E
Sbjct: 88 FYGAFYSDGEISICMEHMDGGSLDQVL-KKAGRIPEQIL-GKVSIAVIKGLT----YLRE 141
Query: 635 EWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMS 694
+ +++HR++ S I ++ +L F ++ L S S G YMS
Sbjct: 142 K--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---------DSMANSFVGTRSYMS 190
Query: 695 PEYIESGEATSMADVYSFGVVVLEVVTGQMAV 726
PE ++ + +D++S G+ ++E+ G+ +
Sbjct: 191 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 222
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 27/223 (12%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFE--KTFAAELVAVAHLRHRNLVRLR 174
E +G+G +G V A G VA+K + + K EL + H +H N++ ++
Sbjct: 60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIK 119
Query: 175 GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLE----AAAPLNWEQRKKIIRGLAAALHY 230
D L Y +S+ VL +L ++ PL E + + L L Y
Sbjct: 120 ------DILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKY 173
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
+H Q+IHRD+K SN++++ ++GDFG+AR L +S HQ+ + E
Sbjct: 174 MHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGL---------CTSPAEHQYFMTE 221
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRR 333
T Y PE T D++S G + E+++ R+
Sbjct: 222 YV---ATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 18/172 (10%)
Query: 556 RFSNELQNLARLRHRNLV---QLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHS- 611
R EL+ L +H N++ + GE +Y ++ L+ + H+I HS
Sbjct: 99 RTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVY------VVLDLMESDLHQIIHSS 152
Query: 612 -ILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLT 670
L H + L + Y+H + QVIHR++ S + ++ + ++G F +A L
Sbjct: 153 QPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLC 209
Query: 671 RNDHGHRKATSGNRSVRGIFGYMSPEYIES-GEATSMADVYSFGVVVLEVVT 721
+ H+ + + R Y +PE + S E T D++S G + E++
Sbjct: 210 TSPAEHQYFMTEYVATR---WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 258
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 102/224 (45%), Gaps = 34/224 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGER-FEKTFAAELVAVAHLRHRNLV 171
F+ E LG+G F +V A + G + AVKC+ +K + E + E+ + ++H N+V
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSL-DRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
L + L LV + L DR++ + + A+ L IR + A++Y
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTL--------IRQVLDAVYY 135
Query: 231 LHEQLETQIIHRDVKTSNVML---DSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
LH I+HRD+K N++ D + + DFGL++ E + + +++
Sbjct: 136 LHRM---GIVHRDLKPENLLYYSQDEESKIMISDFGLSK---MEGKGDVMSTAC------ 183
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
GT GY+ PE + + A D +S G++ ++ G
Sbjct: 184 --------GTPGYVAPEVLAQKPYSKA-VDCWSIGVIAYILLCG 218
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 25/225 (11%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
+D + LG G +G+V AV VAVK + ++ + E+ L H N+V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
+ G H + + Y ++ S + R ++ P ++ L A + YL
Sbjct: 68 KFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP----DAQRFFHQLMAGVVYL 120
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
H I HRD+K N++LD + N ++ DFGLA T N++ L
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLA------------TVFRYNNRERL--L 163
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
++ GT+ Y+ PE ++ DV+S GIV+ +++G D
Sbjct: 164 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 30/215 (13%)
Query: 119 LGSGGFGKVYRAVLPSD---GTVVAVK-CLAEKGERFEKTFAAELVAVAHLRHRNLVRLR 174
+G G FG V++ + S VA+K C + + F E + + H ++V+L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 175 GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQ 234
G + E+ + ++ + L L R +L+ A+ + + + L+ AL YL +
Sbjct: 458 G-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQ------LSTALAYLESK 510
Query: 235 LETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRI 294
+ +HRD+ NV++ S +LGDFGL+R++E Y+
Sbjct: 511 ---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL------------- 554
Query: 295 GGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVV 329
I ++ PES +A SDV+ FG+ + E++
Sbjct: 555 --PIKWMAPESINFRRFTSA-SDVWMFGVCMWEIL 586
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 95/204 (46%), Gaps = 19/204 (9%)
Query: 521 VAEMDFGTAYQGFL----DNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLC 576
+ E FG +QG + V +K ++R +F E + + H ++V+L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 577 GWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEW 636
G TE +++ + + S L S++ + ++ L++A+ YL
Sbjct: 458 GVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQ------LSTALAYLE--- 508
Query: 637 NEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPE 696
+++ +HR+I + + + + +LG F L+ ++ D + KA+ G ++ +M+PE
Sbjct: 509 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIK----WMAPE 562
Query: 697 YIESGEATSMADVYSFGVVVLEVV 720
I TS +DV+ FGV + E++
Sbjct: 563 SINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 97/213 (45%), Gaps = 28/213 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
+G G G V A G VAVK + + ++ + E+V + +H N+V + +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
++L ++ +++ +L ++ + LN EQ + + AL YLH Q
Sbjct: 113 VGEELWVLMEFLQGGALTDIV--------SQVRLNEEQIATVCEAVLQALAYLHAQ---G 161
Query: 239 IIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTI 298
+IHRD+K+ +++L +L DFG + + + + + GT
Sbjct: 162 VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD----------------VPKRKXLVGTP 205
Query: 299 GYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
++ PE + AT + D++S GI+V+E+V G
Sbjct: 206 YWMAPEVISRSLYAT-EVDIWSLGIMVIEMVDG 237
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 10/104 (9%)
Query: 620 NIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKA 679
+ +++ A+ YLH + VIHR+I S +I L D +L F +++ D RK
Sbjct: 145 TVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISK-DVPKRKX 200
Query: 680 TSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
G +M+PE I + D++S G++V+E+V G+
Sbjct: 201 LVGTPY------WMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 25/225 (11%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
+D + LG G +G+V AV VAVK + ++ + E+ L H N+V
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
+ G H + + Y ++ S + R ++ P ++ L A + YL
Sbjct: 69 KFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP----DAQRFFHQLMAGVVYL 121
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
H I HRD+K N++LD + N ++ DFGLA T N++ L
Sbjct: 122 HG---IGITHRDIKPENLLLDERDNLKISDFGLA------------TVFRYNNRERL--L 164
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
++ GT+ Y+ PE ++ DV+S GIV+ +++G D
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 25/225 (11%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
+D + LG G +G+V AV VAVK + ++ + E+ L H N+V
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
+ G H + + Y ++ S + R ++ P ++ L A + YL
Sbjct: 69 KFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP----DAQRFFHQLMAGVVYL 121
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
H I HRD+K N++LD + N ++ DFGLA T N++ L
Sbjct: 122 HG---IGITHRDIKPENLLLDERDNLKISDFGLA------------TVFRYNNRERL--L 164
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
++ GT+ Y+ PE ++ DV+S GIV+ +++G D
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 25/225 (11%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
+D + LG G +G+V AV VAVK + ++ + E+ L H N+V
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
+ G H + + Y ++ S + R ++ P ++ L A + YL
Sbjct: 69 KFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP----DAQRFFHQLMAGVVYL 121
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
H I HRD+K N++LD + N ++ DFGLA T N++ L
Sbjct: 122 HG---IGITHRDIKPENLLLDERDNLKISDFGLA------------TVFRYNNRERL--L 164
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
++ GT+ Y+ PE ++ DV+S GIV+ +++G D
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 99/222 (44%), Gaps = 41/222 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLR------HRNLV 171
+G G +G VY+A P G VA+K + GE E + + VA LR H N+V
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGE--EGLPISTVREVALLRRLEAFEHPNVV 69
Query: 172 RLRGWCV-----HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAA 226
RL C E ++ LV++++ ++ L L + P L E K ++R
Sbjct: 70 RLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAP-----PPGLPAETIKDLMRQFLR 123
Query: 227 ALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQF 286
L +LH I+HRD+K N+++ S +L DFGLAR YQM +
Sbjct: 124 GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI----YSYQMALAP------ 170
Query: 287 HLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEV 328
+ T+ Y PE + + AT D++S G + E+
Sbjct: 171 -------VVVTLWYRAPEVLLQSTYAT-PVDMWSVGCIFAEM 204
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 25/225 (11%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
+D + LG G +G+V AV VAVK + ++ + E+ L H N+V
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVV 68
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
+ G H + + Y ++ S + R ++ P ++ L A + YL
Sbjct: 69 KFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP----DAQRFFHQLMAGVVYL 121
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
H I HRD+K N++LD + N ++ DFGLA T N++ L
Sbjct: 122 HG---IGITHRDIKPENLLLDERDNLKISDFGLA------------TVFRYNNRERL--L 164
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
++ GT+ Y+ PE ++ DV+S GIV+ +++G D
Sbjct: 165 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 97/225 (43%), Gaps = 25/225 (11%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
+D + LG G +G+V AV VAVK + ++ + E+ L H N+V
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
+ G H + + Y ++ S + R ++ P ++ L A + YL
Sbjct: 69 KFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP----DAQRFFHQLMAGVVYL 121
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
H I HRD+K N++LD + N ++ DFGLA + + ++
Sbjct: 122 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL--------------L 164
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
++ GT+ Y+ PE ++ DV+S GIV+ +++G D
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 25/225 (11%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
+D + LG G +G+V AV VAVK + ++ + E+ L H N+V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
+ G H + + Y ++ S + R ++ P ++ L A + YL
Sbjct: 68 KFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP----DAQRFFHQLMAGVVYL 120
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
H I HRD+K N++LD + N ++ DFGLA T N++ L
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLA------------TVFRYNNRERL--L 163
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
++ GT+ Y+ PE ++ DV+S GIV+ +++G D
Sbjct: 164 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 35/229 (15%)
Query: 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRN 169
+ F++ LG+G G V++ G V+A K + E EL +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVL---FRRPENLEAAAPLNWEQRKKIIRGLAA 226
+V G + ++ + ++M SLD+VL R PE + + +I+GL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI------AVIKGLT- 118
Query: 227 ALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQF 286
YL E+ +I+HRDVK SN++++S+ +L DFG++ Q+ S A +
Sbjct: 119 ---YLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSG--------QLIDSMANSFV- 164
Query: 287 HLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAV 335
GT Y+ PE Q G+ + +SD++S G+ ++E+ GR +
Sbjct: 165 ---------GTRSYMSPERLQ-GTHYSVQSDIWSMGLSLVEMAVGRYPI 203
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 92/212 (43%), Gaps = 21/212 (9%)
Query: 519 QRVAEMDFGTAYQGFLDNHQ---YVLVKRL-GMSKCPALRTRFSNELQNLARLRHRNLVQ 574
++++E+ G F +H+ V+ ++L + PA+R + ELQ L +V
Sbjct: 9 EKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVG 68
Query: 575 LCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHE 634
G GE+ + ++ L +L RI IL +IK L YL E
Sbjct: 69 FYGAFYSDGEISICMEHMDGGSLDQVL-KKAGRIPEQIL-GKVSIAVIKGLT----YLRE 122
Query: 635 EWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMS 694
+ +++HR++ S I ++ +L F ++ L S S G YMS
Sbjct: 123 K--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---------DSMANSFVGTRSYMS 171
Query: 695 PEYIESGEATSMADVYSFGVVVLEVVTGQMAV 726
PE ++ + +D++S G+ ++E+ G+ +
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 35/229 (15%)
Query: 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRN 169
+ F++ LG+G G V++ G V+A K + E EL +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVL---FRRPENLEAAAPLNWEQRKKIIRGLAA 226
+V G + ++ + ++M SLD+VL R PE + + +I+GL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI------AVIKGLT- 118
Query: 227 ALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQF 286
YL E+ +I+HRDVK SN++++S+ +L DFG++ Q+ S A +
Sbjct: 119 ---YLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSG--------QLIDSMANSFV- 164
Query: 287 HLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAV 335
GT Y+ PE Q G+ + +SD++S G+ ++E+ GR +
Sbjct: 165 ---------GTRSYMSPERLQ-GTHYSVQSDIWSMGLSLVEMAVGRYPI 203
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 92/212 (43%), Gaps = 21/212 (9%)
Query: 519 QRVAEMDFGTAYQGFLDNHQ---YVLVKRL-GMSKCPALRTRFSNELQNLARLRHRNLVQ 574
++++E+ G F +H+ V+ ++L + PA+R + ELQ L +V
Sbjct: 9 EKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVG 68
Query: 575 LCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHE 634
G GE+ + ++ L +L RI IL +IK L YL E
Sbjct: 69 FYGAFYSDGEISICMEHMDGGSLDQVL-KKAGRIPEQIL-GKVSIAVIKGLT----YLRE 122
Query: 635 EWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMS 694
+ +++HR++ S I ++ +L F ++ L S S G YMS
Sbjct: 123 K--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---------DSMANSFVGTRSYMS 171
Query: 695 PEYIESGEATSMADVYSFGVVVLEVVTGQMAV 726
PE ++ + +D++S G+ ++E+ G+ +
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 97/225 (43%), Gaps = 25/225 (11%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
+D + LG G +G+V AV VAVK + ++ + E+ L H N+V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
+ G H + + Y ++ S + R ++ P ++ L A + YL
Sbjct: 68 KFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP----DAQRFFHQLMAGVVYL 120
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
H I HRD+K N++LD + N ++ DFGLA + + ++
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL--------------L 163
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
++ GT+ Y+ PE ++ DV+S GIV+ +++G D
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 25/225 (11%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
+D + LG G +G+V AV VAVK + ++ + E+ L H N+V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVV 67
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
+ G H + + Y ++ S + R ++ P ++ L A + YL
Sbjct: 68 KFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP----DAQRFFHQLMAGVVYL 120
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
H I HRD+K N++LD + N ++ DFGLA T N++ L
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLA------------TVFRYNNRERL--L 163
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
++ GT+ Y+ PE ++ DV+S GIV+ +++G D
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 35/229 (15%)
Query: 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRN 169
+ F++ LG+G G V++ G V+A K + E EL +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVL---FRRPENLEAAAPLNWEQRKKIIRGLAA 226
+V G + ++ + ++M SLD+VL R PE + + +I+GL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI------AVIKGLT- 118
Query: 227 ALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQF 286
YL E+ +I+HRDVK SN++++S+ +L DFG++ Q+ S A +
Sbjct: 119 ---YLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSG--------QLIDSMANSFV- 164
Query: 287 HLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAV 335
GT Y+ PE Q G+ + +SD++S G+ ++E+ GR +
Sbjct: 165 ---------GTRSYMSPERLQ-GTHYSVQSDIWSMGLSLVEMAVGRYPI 203
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 92/212 (43%), Gaps = 21/212 (9%)
Query: 519 QRVAEMDFGTAYQGFLDNHQ---YVLVKRL-GMSKCPALRTRFSNELQNLARLRHRNLVQ 574
++++E+ G F +H+ V+ ++L + PA+R + ELQ L +V
Sbjct: 9 EKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVG 68
Query: 575 LCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHE 634
G GE+ + ++ L +L RI IL +IK L YL E
Sbjct: 69 FYGAFYSDGEISICMEHMDGGSLDQVL-KKAGRIPEQIL-GKVSIAVIKGLT----YLRE 122
Query: 635 EWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMS 694
+ +++HR++ S I ++ +L F ++ L S S G YMS
Sbjct: 123 K--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---------DSMANSFVGTRSYMS 171
Query: 695 PEYIESGEATSMADVYSFGVVVLEVVTGQMAV 726
PE ++ + +D++S G+ ++E+ G+ +
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 34/225 (15%)
Query: 113 FDEDEVLGSGGFGKVY--RAVLPSDG-TVVAVKCLAEKGERFEKTFAAELV--AVAHLRH 167
F+ +VLG G FGKV+ + + SD + A+K L + + ++ + + H
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+V+L E +L L+ D++ R D LF R L E K + LA A
Sbjct: 86 PFIVKLHYAFQTEGKLYLILDFL--RGGD--LFTR---LSKEVMFTEEDVKFYLAELALA 138
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR-WLEHELQYQMRTSSARNHQF 286
L +LH II+RD+K N++LD + + +L DFGL++ ++HE
Sbjct: 139 LDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE--------------- 180
Query: 287 HLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
+ GT+ Y+ PE + T +D +SFG+++ E+++G
Sbjct: 181 --KKAYSFCGTVEYMAPEVVNRRG-HTQSADWWSFGVLMFEMLTG 222
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 26/176 (14%)
Query: 554 RTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSA-----TRILSHLLFHNNHRI 608
R R E L + H +V+L +G++ +I D+ TR+ ++F
Sbjct: 70 RVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED-- 127
Query: 609 GHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEF 668
++++ + LA A+ +LH + +I+R++ I LD + + +L F L++
Sbjct: 128 ----VKFY-----LAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK- 174
Query: 669 LTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQM 724
DH +KA S +V YM+PE + T AD +SFGV++ E++TG +
Sbjct: 175 -ESIDH-EKKAYSFCGTVE----YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTL 224
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 25/225 (11%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
+D + LG G +G+V AV VAVK + ++ + E+ L H N+V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVV 67
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
+ G H + + Y ++ S + R ++ P ++ L A + YL
Sbjct: 68 KFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP----DAQRFFHQLMAGVVYL 120
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
H I HRD+K N++LD + N ++ DFGLA T N++ L
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLA------------TVFRYNNRERL--L 163
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
++ GT+ Y+ PE ++ DV+S GIV+ +++G D
Sbjct: 164 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 35/229 (15%)
Query: 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRN 169
+ F++ LG+G G V++ G V+A K + E EL +
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVL---FRRPENLEAAAPLNWEQRKKIIRGLAA 226
+V G + ++ + ++M SLD+VL R PE + + +I+GL
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI------AVIKGLT- 145
Query: 227 ALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQF 286
YL E+ +I+HRDVK SN++++S+ +L DFG++ Q+ S A +
Sbjct: 146 ---YLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSG--------QLIDSMANSFV- 191
Query: 287 HLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAV 335
GT Y+ PE Q G+ + +SD++S G+ ++E+ GR +
Sbjct: 192 ---------GTRSYMSPERLQ-GTHYSVQSDIWSMGLSLVEMAVGRYPI 230
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 92/212 (43%), Gaps = 21/212 (9%)
Query: 519 QRVAEMDFGTAYQGFLDNHQ---YVLVKRL-GMSKCPALRTRFSNELQNLARLRHRNLVQ 574
++++E+ G F +H+ V+ ++L + PA+R + ELQ L +V
Sbjct: 36 EKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVG 95
Query: 575 LCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHE 634
G GE+ + ++ L +L RI IL +IK L YL E
Sbjct: 96 FYGAFYSDGEISICMEHMDGGSLDQVL-KKAGRIPEQIL-GKVSIAVIKGLT----YLRE 149
Query: 635 EWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMS 694
+ +++HR++ S I ++ +L F ++ L S S G YMS
Sbjct: 150 K--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---------DSMANSFVGTRSYMS 198
Query: 695 PEYIESGEATSMADVYSFGVVVLEVVTGQMAV 726
PE ++ + +D++S G+ ++E+ G+ +
Sbjct: 199 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 34/225 (15%)
Query: 113 FDEDEVLGSGGFGKVY--RAVLPSDG-TVVAVKCLAEKGERFEKTFAAELV--AVAHLRH 167
F+ +VLG G FGKV+ + + SD + A+K L + + ++ + + H
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 86
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+V+L E +L L+ D++ R D LF R L E K + LA A
Sbjct: 87 PFIVKLHYAFQTEGKLYLILDFL--RGGD--LFTR---LSKEVMFTEEDVKFYLAELALA 139
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR-WLEHELQYQMRTSSARNHQF 286
L +LH II+RD+K N++LD + + +L DFGL++ ++HE
Sbjct: 140 LDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE--------------- 181
Query: 287 HLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
+ GT+ Y+ PE + T +D +SFG+++ E+++G
Sbjct: 182 --KKAYSFCGTVEYMAPEVVNRRG-HTQSADWWSFGVLMFEMLTG 223
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 26/176 (14%)
Query: 554 RTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSA-----TRILSHLLFHNNHRI 608
R R E L + H +V+L +G++ +I D+ TR+ ++F
Sbjct: 71 RVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED-- 128
Query: 609 GHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEF 668
++++ + LA A+ +LH + +I+R++ I LD + + +L F L++
Sbjct: 129 ----VKFY-----LAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK- 175
Query: 669 LTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQM 724
DH +KA S +V YM+PE + T AD +SFGV++ E++TG +
Sbjct: 176 -ESIDH-EKKAYSFCGTVE----YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTL 225
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 109/243 (44%), Gaps = 39/243 (16%)
Query: 97 NPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEK 153
P +F I S+ + VLG G FG+V G AVK +++ K + ++
Sbjct: 12 TPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE 71
Query: 154 TFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYD-YMPNRSLDRVLFR-RPENLEAAAP 211
+ E+ + L H N+++L + + LV + Y D ++ R R ++AA
Sbjct: 72 SLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-- 129
Query: 212 LNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQ---YNARLGDFGLARWL 268
+IIR + + + Y+H+ +I+HRD+K N++L+S+ N R+ DFGL+
Sbjct: 130 -------RIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179
Query: 269 EHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEV 328
E + + + GT Y+ PE K DV+S G+++ +
Sbjct: 180 EASKKMKDKI-----------------GTAYYIAPEVLH--GTYDEKCDVWSTGVILYIL 220
Query: 329 VSG 331
+SG
Sbjct: 221 LSG 223
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 35/229 (15%)
Query: 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRN 169
+ F++ LG+G G V++ G V+A K + E EL +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVL---FRRPENLEAAAPLNWEQRKKIIRGLAA 226
+V G + ++ + ++M SLD+VL R PE + + +I+GL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI------AVIKGLT- 118
Query: 227 ALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQF 286
YL E+ +I+HRDVK SN++++S+ +L DFG++ L +
Sbjct: 119 ---YLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-------------- 159
Query: 287 HLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAV 335
GT Y+ PE Q G+ + +SD++S G+ ++E+ GR +
Sbjct: 160 ----ANSFVGTRSYMSPERLQ-GTHYSVQSDIWSMGLSLVEMAVGRYPI 203
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 118/284 (41%), Gaps = 39/284 (13%)
Query: 519 QRVAEMDFGTAYQGFLDNHQ---YVLVKRL-GMSKCPALRTRFSNELQNLARLRHRNLVQ 574
++++E+ G F +H+ V+ ++L + PA+R + ELQ L +V
Sbjct: 9 EKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVG 68
Query: 575 LCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHE 634
G GE+ + ++ L +L RI IL + ++ + YL E
Sbjct: 69 FYGAFYSDGEISICMEHMDGGSLDQVL-KKAGRIPEQILG-----KVSIAVIKGLTYLRE 122
Query: 635 EWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMS 694
+ +++HR++ S I ++ +L F ++ L S S G YMS
Sbjct: 123 K--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---------DSMANSFVGTRSYMS 171
Query: 695 PEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLA--EL 752
PE ++ + +D++S G+ ++E+ G R P + E + P+A EL
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVG------RYP----IPPPDAKEDSRPPMAIFEL 221
Query: 753 VDLSLNGEYNHKELMRLIKLGI-----ACTLSNPELRPSMRQIL 791
+D +N E K + L C + NP R ++Q++
Sbjct: 222 LDYIVN-EPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 264
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 34/225 (15%)
Query: 113 FDEDEVLGSGGFGKVY--RAVLPSDG-TVVAVKCLAEKGERFEKTFAAELV--AVAHLRH 167
F+ +VLG G FGKV+ + + SD + A+K L + + ++ + + H
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+V+L E +L L+ D++ R D LF R L E K + LA A
Sbjct: 86 PFIVKLHYAFQTEGKLYLILDFL--RGGD--LFTR---LSKEVMFTEEDVKFYLAELALA 138
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR-WLEHELQYQMRTSSARNHQF 286
L +LH II+RD+K N++LD + + +L DFGL++ ++HE
Sbjct: 139 LDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE--------------- 180
Query: 287 HLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
+ GT+ Y+ PE + T +D +SFG+++ E+++G
Sbjct: 181 --KKAYSFCGTVEYMAPEVVNRRG-HTQSADWWSFGVLMFEMLTG 222
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 26/176 (14%)
Query: 554 RTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSA-----TRILSHLLFHNNHRI 608
R R E L + H +V+L +G++ +I D+ TR+ ++F
Sbjct: 70 RVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED-- 127
Query: 609 GHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEF 668
++++ + LA A+ +LH + +I+R++ I LD + + +L F L++
Sbjct: 128 ----VKFY-----LAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK- 174
Query: 669 LTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQM 724
DH +KA S G YM+PE + T AD +SFGV++ E++TG +
Sbjct: 175 -ESIDH-EKKAYS----FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTL 224
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 109/242 (45%), Gaps = 39/242 (16%)
Query: 98 PRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEKT 154
P +F I S+ + VLG G FG+V G AVK +++ K + +++
Sbjct: 19 PGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES 78
Query: 155 FAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYD-YMPNRSLDRVLFR-RPENLEAAAPL 212
E+ + L H N+++L + + LV + Y D ++ R R ++AA
Sbjct: 79 LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA--- 135
Query: 213 NWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQ---YNARLGDFGLARWLE 269
+IIR + + + Y+H+ +I+HRD+K N++L+S+ N R+ DFGL+ E
Sbjct: 136 ------RIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 186
Query: 270 HELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVV 329
+ + + GT Y+ PE K DV+S G+++ ++
Sbjct: 187 ASKKMKDKI-----------------GTAYYIAPEVLH--GTYDEKCDVWSTGVILYILL 227
Query: 330 SG 331
SG
Sbjct: 228 SG 229
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 98/222 (44%), Gaps = 41/222 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLR------HRNLV 171
+G G +G VY+A P G VA+K + GE E + + VA LR H N+V
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGE--EGLPISTVREVALLRRLEAFEHPNVV 69
Query: 172 RLRGWCV-----HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAA 226
RL C E ++ LV++++ ++ L L + P L E K ++R
Sbjct: 70 RLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAP-----PPGLPAETIKDLMRQFLR 123
Query: 227 ALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQF 286
L +LH I+HRD+K N+++ S +L DFGLAR YQM
Sbjct: 124 GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI----YSYQMALDP------ 170
Query: 287 HLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEV 328
+ T+ Y PE + + AT D++S G + E+
Sbjct: 171 -------VVVTLWYRAPEVLLQSTYAT-PVDMWSVGCIFAEM 204
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 36/226 (15%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAA---ELVAVAHLRHRNLVRL 173
+ LG G FGKV G VAVK L + R E+ + RH ++++L
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 174 RGWCVHEDQLLLVYDYMPNRSLDRVLFR--RPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
+V +Y+ L + + R E +EA +++ + + +A+ Y
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEA---------RRLFQQILSAVDYC 127
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWL-EHELQYQMRTSSARNHQFHLAE 290
H + ++HRD+K NV+LD+ NA++ DFGL+ + + E +RTS
Sbjct: 128 HRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF---LRTSC---------- 171
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
G+ Y PE A + D++S G+++ ++ G D
Sbjct: 172 -----GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 83/193 (43%), Gaps = 24/193 (12%)
Query: 540 VLVKRLGMSKCPALRT--RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY-SATRI 596
V VK L K +L + E+QNL RH ++++L + + ++ +Y S +
Sbjct: 39 VAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGEL 98
Query: 597 LSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDM 656
++ H ++ + + + SA+ Y H V+HR++ + LD M
Sbjct: 99 FDYICKHGR-------VEEMEARRLFQQILSAVDYCHR---HMVVHRDLKPENVLLDAHM 148
Query: 657 NPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGE--ATSMADVYSFGV 714
N ++ F L+ ++ + S N Y +PE I SG A D++S GV
Sbjct: 149 NAKIADFGLSNMMSDGEFLRTSCGSPN--------YAAPEVI-SGRLYAGPEVDIWSCGV 199
Query: 715 VVLEVVTGQMAVD 727
++ ++ G + D
Sbjct: 200 ILYALLCGTLPFD 212
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 35/229 (15%)
Query: 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRN 169
+ F++ LG+G G V++ G V+A K + E EL +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVL---FRRPENLEAAAPLNWEQRKKIIRGLAA 226
+V G + ++ + ++M SLD+VL R PE + + +I+GL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI------AVIKGLT- 118
Query: 227 ALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQF 286
YL E+ +I+HRDVK SN++++S+ +L DFG++ Q+ S A +
Sbjct: 119 ---YLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSG--------QLIDSMANSFV- 164
Query: 287 HLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAV 335
GT Y+ PE Q G+ + +SD++S G+ ++E+ GR +
Sbjct: 165 ---------GTRSYMSPERLQ-GTHYSVQSDIWSMGLSLVEMAVGRYPI 203
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 92/212 (43%), Gaps = 21/212 (9%)
Query: 519 QRVAEMDFGTAYQGFLDNHQ---YVLVKRL-GMSKCPALRTRFSNELQNLARLRHRNLVQ 574
++++E+ G F +H+ V+ ++L + PA+R + ELQ L +V
Sbjct: 9 EKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVG 68
Query: 575 LCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHE 634
G GE+ + ++ L +L RI IL +IK L YL E
Sbjct: 69 FYGAFYSDGEISICMEHMDGGSLDQVL-KKAGRIPEQIL-GKVSIAVIKGLT----YLRE 122
Query: 635 EWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMS 694
+ +++HR++ S I ++ +L F ++ L S S G YMS
Sbjct: 123 K--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---------DSMANSFVGTRSYMS 171
Query: 695 PEYIESGEATSMADVYSFGVVVLEVVTGQMAV 726
PE ++ + +D++S G+ ++E+ G+ +
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 35/229 (15%)
Query: 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRN 169
+ F++ LG+G G V++ G V+A K + E EL +
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVL---FRRPENLEAAAPLNWEQRKKIIRGLAA 226
+V G + ++ + ++M SLD+VL R PE + + +I+GL
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI------AVIKGLT- 180
Query: 227 ALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQF 286
YL E+ +I+HRDVK SN++++S+ +L DFG++ L +
Sbjct: 181 ---YLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-------------- 221
Query: 287 HLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAV 335
GT Y+ PE Q G+ + +SD++S G+ ++E+ GR +
Sbjct: 222 ----ANSFVGTRSYMSPERLQ-GTHYSVQSDIWSMGLSLVEMAVGRYPI 265
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 92/212 (43%), Gaps = 21/212 (9%)
Query: 519 QRVAEMDFGTAYQGFLDNHQ---YVLVKRL-GMSKCPALRTRFSNELQNLARLRHRNLVQ 574
++++E+ G F +H+ V+ ++L + PA+R + ELQ L +V
Sbjct: 71 EKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVG 130
Query: 575 LCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHE 634
G GE+ + ++ L +L RI IL +IK L YL E
Sbjct: 131 FYGAFYSDGEISICMEHMDGGSLDQVL-KKAGRIPEQIL-GKVSIAVIKGLT----YLRE 184
Query: 635 EWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMS 694
+ +++HR++ S I ++ +L F ++ L S S G YMS
Sbjct: 185 K--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---------DSMANSFVGTRSYMS 233
Query: 695 PEYIESGEATSMADVYSFGVVVLEVVTGQMAV 726
PE ++ + +D++S G+ ++E+ G+ +
Sbjct: 234 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 27/215 (12%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLVRLRGWC 177
LG G + VY+ +VA+K + E E T E+ + L+H N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 178 VHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLET 237
E L LV++Y+ ++ L + L + +N K + L L Y H Q
Sbjct: 70 HTEKSLTLVFEYL-DKDLKQYLD------DCGNIINMHNVKLFLFQLLRGLAYCHRQ--- 119
Query: 238 QIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGT 297
+++HRD+K N++++ + +L DFGLAR + T + N T
Sbjct: 120 KVLHRDLKPQNLLINERGELKLADFGLAR------AKSIPTKTYDNEVV----------T 163
Query: 298 IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
+ Y PP+ + + + D++ G + E+ +GR
Sbjct: 164 LWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 104/227 (45%), Gaps = 28/227 (12%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGER---FEKTFAAELVAVAHLRHRNLVRLRG 175
LG G +G V++++ G VVAVK + + + ++TF ++ H N+V L
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 176 WCVHEDQ--LLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHE 233
++ + LV+DYM L V+ R LE ++ ++ L + YLH
Sbjct: 77 VLRADNDRDVYLVFDYMET-DLHAVI--RANILEPV------HKQYVVYQLIKVIKYLHS 127
Query: 234 QLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEH--------ELQYQMRTSSARNHQ 285
++HRD+K SN++L+++ + ++ DFGL+R + L T + + Q
Sbjct: 128 ---GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQ 184
Query: 286 FHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
L + T Y PE + T D++S G ++ E++ G+
Sbjct: 185 PILTDYV---ATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 109/243 (44%), Gaps = 39/243 (16%)
Query: 97 NPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEK 153
P +F I S+ + VLG G FG+V G AVK +++ K + ++
Sbjct: 35 TPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE 94
Query: 154 TFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYD-YMPNRSLDRVLFR-RPENLEAAAP 211
+ E+ + L H N+++L + + LV + Y D ++ R R ++AA
Sbjct: 95 SLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-- 152
Query: 212 LNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQ---YNARLGDFGLARWL 268
+IIR + + + Y+H+ +I+HRD+K N++L+S+ N R+ DFGL+
Sbjct: 153 -------RIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 202
Query: 269 EHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEV 328
E + + + GT Y+ PE K DV+S G+++ +
Sbjct: 203 EASKKMKDKI-----------------GTAYYIAPEVLH--GTYDEKCDVWSTGVILYIL 243
Query: 329 VSG 331
+SG
Sbjct: 244 LSG 246
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 97/215 (45%), Gaps = 30/215 (13%)
Query: 119 LGSGGFGKVYRAVLPSD---GTVVAVK-CLAEKGERFEKTFAAELVAVAHLRHRNLVRLR 174
+G G FG V++ + S VA+K C + + F E + + H ++V+L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 175 GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQ 234
G + E+ + ++ + L L R +L+ A+ + + + L+ AL YL +
Sbjct: 78 G-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQ------LSTALAYLESK 130
Query: 235 LETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRI 294
+ +HRD+ NV++ + +LGDFGL+R++E Y+
Sbjct: 131 ---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL------------- 174
Query: 295 GGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVV 329
I ++ PES +A SDV+ FG+ + E++
Sbjct: 175 --PIKWMAPESINFRRFTSA-SDVWMFGVCMWEIL 206
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 94/204 (46%), Gaps = 19/204 (9%)
Query: 521 VAEMDFGTAYQGFL----DNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLC 576
+ E FG +QG + V +K ++R +F E + + H ++V+L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 577 GWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEW 636
G TE +++ + + S L S++ + ++ L++A+ YL
Sbjct: 78 GVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQ------LSTALAYLE--- 128
Query: 637 NEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPE 696
+++ +HR+I + + + +LG F L+ ++ D + KA+ G ++ +M+PE
Sbjct: 129 SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM--EDSTYYKASKGKLPIK----WMAPE 182
Query: 697 YIESGEATSMADVYSFGVVVLEVV 720
I TS +DV+ FGV + E++
Sbjct: 183 SINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 109/243 (44%), Gaps = 39/243 (16%)
Query: 97 NPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEK 153
P +F I S+ + VLG G FG+V G AVK +++ K + ++
Sbjct: 36 TPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE 95
Query: 154 TFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYD-YMPNRSLDRVLFR-RPENLEAAAP 211
+ E+ + L H N+++L + + LV + Y D ++ R R ++AA
Sbjct: 96 SLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-- 153
Query: 212 LNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQ---YNARLGDFGLARWL 268
+IIR + + + Y+H+ +I+HRD+K N++L+S+ N R+ DFGL+
Sbjct: 154 -------RIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 203
Query: 269 EHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEV 328
E + + + GT Y+ PE K DV+S G+++ +
Sbjct: 204 EASKKMKDKI-----------------GTAYYIAPEVLH--GTYDEKCDVWSTGVILYIL 244
Query: 329 VSG 331
+SG
Sbjct: 245 LSG 247
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 102/221 (46%), Gaps = 29/221 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVR 172
+D E LG+G FG V+R + G A K + E ++T E+ ++ LRH LV
Sbjct: 53 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVN 112
Query: 173 LRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
L +++++++Y++M L + + ++ ++ + +R + L ++H
Sbjct: 113 LHDAFEDDNEMVMIYEFMSGGELFEKV------ADEHNKMSEDEAVEYMRQVCKGLCHMH 166
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNA--RLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
E +H D+K N+M ++ + +L DFGL L+ + ++ T +A +AE
Sbjct: 167 EN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAE 223
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
G +GY +D++S G++ ++SG
Sbjct: 224 ----GKPVGYY--------------TDMWSVGVLSYILLSG 246
Score = 33.5 bits (75), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 66/165 (40%), Gaps = 18/165 (10%)
Query: 560 ELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY-SATRILSHLLFHNNHRIGHSILQWHHR 618
E+Q ++ LRH LV L + EM++IY++ S + + +N +++
Sbjct: 98 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEY--- 154
Query: 619 YNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEF-LTRNDHGHR 677
++ + + ++HE +H ++ I R L +F LT H
Sbjct: 155 ---MRQVCKGLCHMHE---NNYVHLDLKPENIMF---TTKRSNELKLIDFGLT----AHL 201
Query: 678 KATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
+ G + +PE E D++S GV+ +++G
Sbjct: 202 DPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 97/215 (45%), Gaps = 30/215 (13%)
Query: 119 LGSGGFGKVYRAVLPSD---GTVVAVK-CLAEKGERFEKTFAAELVAVAHLRHRNLVRLR 174
+G G FG V++ + S VA+K C + + F E + + H ++V+L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 175 GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQ 234
G + E+ + ++ + L L R +L+ A+ + + + L+ AL YL +
Sbjct: 458 G-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQ------LSTALAYLESK 510
Query: 235 LETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRI 294
+ +HRD+ NV++ + +LGDFGL+R++E Y+
Sbjct: 511 ---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL------------- 554
Query: 295 GGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVV 329
I ++ PES +A SDV+ FG+ + E++
Sbjct: 555 --PIKWMAPESINFRRFTSA-SDVWMFGVCMWEIL 586
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 94/204 (46%), Gaps = 19/204 (9%)
Query: 521 VAEMDFGTAYQGFL----DNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLC 576
+ E FG +QG + V +K ++R +F E + + H ++V+L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 577 GWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEW 636
G TE +++ + + S L S++ + ++ L++A+ YL
Sbjct: 458 GVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQ------LSTALAYLE--- 508
Query: 637 NEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPE 696
+++ +HR+I + + + +LG F L+ ++ D + KA+ G ++ +M+PE
Sbjct: 509 SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM--EDSTYYKASKGKLPIK----WMAPE 562
Query: 697 YIESGEATSMADVYSFGVVVLEVV 720
I TS +DV+ FGV + E++
Sbjct: 563 SINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 102/221 (46%), Gaps = 29/221 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVR 172
+D E LG+G FG V+R + G A K + E ++T E+ ++ LRH LV
Sbjct: 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVN 218
Query: 173 LRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
L +++++++Y++M L + + ++ ++ + +R + L ++H
Sbjct: 219 LHDAFEDDNEMVMIYEFMSGGELFEKV------ADEHNKMSEDEAVEYMRQVCKGLCHMH 272
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNA--RLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
E +H D+K N+M ++ + +L DFGL L+ + ++ T +A +AE
Sbjct: 273 EN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAE 329
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
G +GY +D++S G++ ++SG
Sbjct: 330 ----GKPVGYY--------------TDMWSVGVLSYILLSG 352
Score = 33.1 bits (74), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 66/165 (40%), Gaps = 18/165 (10%)
Query: 560 ELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY-SATRILSHLLFHNNHRIGHSILQWHHR 618
E+Q ++ LRH LV L + EM++IY++ S + + +N +++
Sbjct: 204 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEY--- 260
Query: 619 YNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEF-LTRNDHGHR 677
++ + + ++HE +H ++ I R L +F LT H
Sbjct: 261 ---MRQVCKGLCHMHE---NNYVHLDLKPENIMF---TTKRSNELKLIDFGLT----AHL 307
Query: 678 KATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
+ G + +PE E D++S GV+ +++G
Sbjct: 308 DPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 104/229 (45%), Gaps = 35/229 (15%)
Query: 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRN 169
+ F+ LG+G G V + G ++A K + E EL +
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLF---RRPENLEAAAPLNWEQRKKIIRGLAA 226
+V G + ++ + ++M SLD+VL R PE + + ++RGLA
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSI------AVLRGLA- 128
Query: 227 ALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQF 286
YL E+ QI+HRDVK SN++++S+ +L DFG++ Q+ S A +
Sbjct: 129 ---YLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSG--------QLIDSMANSFV- 174
Query: 287 HLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAV 335
GT Y+ PE Q G+ + +SD++S G+ ++E+ GR +
Sbjct: 175 ---------GTRSYMAPERLQ-GTHYSVQSDIWSMGLSLVELAVGRYPI 213
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 75/176 (42%), Gaps = 17/176 (9%)
Query: 551 PALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGH 610
PA+R + ELQ L +V G GE+ + ++ L +L RI
Sbjct: 55 PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-KEAKRIPE 113
Query: 611 SILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLT 670
IL + ++ + YL E+ Q++HR++ S I ++ +L F ++ L
Sbjct: 114 EILG-----KVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 166
Query: 671 RNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAV 726
S S G YM+PE ++ + +D++S G+ ++E+ G+ +
Sbjct: 167 ---------DSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 98/222 (44%), Gaps = 41/222 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLR------HRNLV 171
+G G +G VY+A P G VA+K + GE E + + VA LR H N+V
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGE--EGLPISTVREVALLRRLEAFEHPNVV 69
Query: 172 RLRGWCV-----HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAA 226
RL C E ++ LV++++ ++ L L + P L E K ++R
Sbjct: 70 RLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAP-----PPGLPAETIKDLMRQFLR 123
Query: 227 ALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQF 286
L +LH I+HRD+K N+++ S +L DFGLAR YQM
Sbjct: 124 GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI----YSYQMALFP------ 170
Query: 287 HLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEV 328
+ T+ Y PE + + AT D++S G + E+
Sbjct: 171 -------VVVTLWYRAPEVLLQSTYAT-PVDMWSVGCIFAEM 204
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 112/272 (41%), Gaps = 51/272 (18%)
Query: 108 IGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVA------ 161
+ N FD ++LG G FGKV + G A+K L R E A + VA
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKIL-----RKEVIIAKDEVAHTVTES 56
Query: 162 --VAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKK 219
+ + RH L L+ D+L V +Y L L R E A +
Sbjct: 57 RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE--- 113
Query: 220 IIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTS 279
+ +AL YLH + +++RD+K N+MLD + ++ DFGL + + +
Sbjct: 114 ----IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK--------EGISD 158
Query: 280 SARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTY 339
A F GT YL PE + A D + G+V+ E++ GR Y
Sbjct: 159 GATMKTF--------CGTPEYLAPEVLEDNDYGRA-VDWWGLGVVMYEMMCGRLPF---Y 206
Query: 340 PDD-----QIILLDWI---RRLSDEGKVLQAG 363
D ++IL++ I R LS E K L AG
Sbjct: 207 NQDHERLFELILMEEIRFPRTLSPEAKSLLAG 238
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 16/103 (15%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ SA+ YLH + V++R+I + LD D + ++ F L ++ S
Sbjct: 114 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC----------KEGISDGA 160
Query: 685 SVRGIFG---YMSPEYIESGEATSMADVYSFGVVVLEVVTGQM 724
+++ G Y++PE +E + D + GVV+ E++ G++
Sbjct: 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 203
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 104/238 (43%), Gaps = 43/238 (18%)
Query: 117 EVLGSGGFGKVYRAVL-----PSDGTVVAVKCLAEKGERFE-KTFAAELVAVAHLRHRNL 170
+ LG G FGKV +A + T VAVK L E E + +E + + H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAA----------APLNWEQRKKI 220
++L G C + LLL+ +Y SL R R + + L+ + +
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSL-RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 221 IRG--------LAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHEL 272
G ++ + YL E +++HRD+ N+++ ++ DFGL+R + E
Sbjct: 148 TMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 273 QYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
Y R+ RI + ++ ES + T +SDV+SFG+++ E+V+
Sbjct: 205 SYVKRSQG------------RI--PVKWMAIESLFD-HIYTTQSDVWSFGVLLWEIVT 247
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 88/201 (43%), Gaps = 28/201 (13%)
Query: 540 VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSH 599
V VK L + P+ +E L ++ H ++++L G C++ G +L+I +Y+ L
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 600 LLFHNNHRIGHSILQWHHRY-------------------NIIKSLASAILYLHEEWNEQV 640
L + ++G L + ++ + YL E ++
Sbjct: 116 FL-RESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KL 171
Query: 641 IHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIES 700
+HR++ + I + ++ F L+ + D + K + G V+ +M+ E +
Sbjct: 172 VHRDLAARNILVAEGRKMKISDFGLSRDVYEED-SYVKRSQGRIPVK----WMAIESLFD 226
Query: 701 GEATSMADVYSFGVVVLEVVT 721
T+ +DV+SFGV++ E+VT
Sbjct: 227 HIYTTQSDVWSFGVLLWEIVT 247
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 112/272 (41%), Gaps = 51/272 (18%)
Query: 108 IGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVA------ 161
+ N FD ++LG G FGKV + G A+K L R E A + VA
Sbjct: 5 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKIL-----RKEVIIAKDEVAHTVTES 59
Query: 162 --VAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKK 219
+ + RH L L+ D+L V +Y L L R E A +
Sbjct: 60 RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE--- 116
Query: 220 IIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTS 279
+ +AL YLH + +++RD+K N+MLD + ++ DFGL + + +
Sbjct: 117 ----IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK--------EGISD 161
Query: 280 SARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTY 339
A F GT YL PE + A D + G+V+ E++ GR Y
Sbjct: 162 GATMKTF--------CGTPEYLAPEVLEDNDYGRA-VDWWGLGVVMYEMMCGRLPF---Y 209
Query: 340 PDD-----QIILLDWI---RRLSDEGKVLQAG 363
D ++IL++ I R LS E K L AG
Sbjct: 210 NQDHERLFELILMEEIRFPRTLSPEAKSLLAG 241
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 16/103 (15%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ SA+ YLH + V++R+I + LD D + ++ F L ++ S
Sbjct: 117 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC----------KEGISDGA 163
Query: 685 SVRGIFG---YMSPEYIESGEATSMADVYSFGVVVLEVVTGQM 724
+++ G Y++PE +E + D + GVV+ E++ G++
Sbjct: 164 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 206
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 112/272 (41%), Gaps = 51/272 (18%)
Query: 108 IGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVA------ 161
+ N FD ++LG G FGKV + G A+K L R E A + VA
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKIL-----RKEVIIAKDEVAHTVTES 56
Query: 162 --VAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKK 219
+ + RH L L+ D+L V +Y L L R E A +
Sbjct: 57 RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE--- 113
Query: 220 IIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTS 279
+ +AL YLH + +++RD+K N+MLD + ++ DFGL + + +
Sbjct: 114 ----IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK--------EGISD 158
Query: 280 SARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTY 339
A F GT YL PE + A D + G+V+ E++ GR Y
Sbjct: 159 GATMKTF--------CGTPEYLAPEVLEDNDYGRA-VDWWGLGVVMYEMMCGRLPF---Y 206
Query: 340 PDD-----QIILLDWI---RRLSDEGKVLQAG 363
D ++IL++ I R LS E K L AG
Sbjct: 207 NQDHERLFELILMEEIRFPRTLSPEAKSLLAG 238
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 16/103 (15%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ SA+ YLH + V++R+I + LD D + ++ F L ++ S
Sbjct: 114 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC----------KEGISDGA 160
Query: 685 SVRGIFG---YMSPEYIESGEATSMADVYSFGVVVLEVVTGQM 724
+++ G Y++PE +E + D + GVV+ E++ G++
Sbjct: 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 203
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 92/215 (42%), Gaps = 30/215 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178
+GSG FG +VAVK + E+GE+ ++ E++ LRH N+VR + +
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYI-ERGEKIDENVKREIINHRSLRHPNIVRFKEVIL 84
Query: 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ 238
L +V +Y LF R N A + ++ + + L + + Y H Q
Sbjct: 85 TPTHLAIVMEYASGGE----LFERICN---AGRFSEDEARFFFQQLISGVSYCHAM---Q 134
Query: 239 IIHRDVKTSNVMLDSQYNARLG--DFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGG 296
+ HRD+K N +LD RL DFG ++ L Q +++ G
Sbjct: 135 VCHRDLKLENTLLDGSPAPRLKICDFGYSK--SSVLHSQPKSTV---------------G 177
Query: 297 TIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T Y+ PE K +DV+S G+ + ++ G
Sbjct: 178 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 112/272 (41%), Gaps = 51/272 (18%)
Query: 108 IGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVA------ 161
+ N FD ++LG G FGKV + G A+K L R E A + VA
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKIL-----RKEVIIAKDEVAHTVTES 56
Query: 162 --VAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKK 219
+ + RH L L+ D+L V +Y L L R E A +
Sbjct: 57 RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE--- 113
Query: 220 IIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTS 279
+ +AL YLH + +++RD+K N+MLD + ++ DFGL + + +
Sbjct: 114 ----IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK--------EGISD 158
Query: 280 SARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTY 339
A F GT YL PE + A D + G+V+ E++ GR Y
Sbjct: 159 GATMKXF--------CGTPEYLAPEVLEDNDYGRA-VDWWGLGVVMYEMMCGRLPF---Y 206
Query: 340 PDD-----QIILLDWI---RRLSDEGKVLQAG 363
D ++IL++ I R LS E K L AG
Sbjct: 207 NQDHERLFELILMEEIRFPRTLSPEAKSLLAG 238
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 16/103 (15%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ SA+ YLH + V++R+I + LD D + ++ F L ++ S
Sbjct: 114 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC----------KEGISDGA 160
Query: 685 SVRGIFG---YMSPEYIESGEATSMADVYSFGVVVLEVVTGQM 724
+++ G Y++PE +E + D + GVV+ E++ G++
Sbjct: 161 TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 203
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 112/272 (41%), Gaps = 51/272 (18%)
Query: 108 IGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVA------ 161
+ N FD ++LG G FGKV + G A+K L R E A + VA
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKIL-----RKEVIIAKDEVAHTVTES 56
Query: 162 --VAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKK 219
+ + RH L L+ D+L V +Y L L R E A +
Sbjct: 57 RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE--- 113
Query: 220 IIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTS 279
+ +AL YLH + +++RD+K N+MLD + ++ DFGL + + +
Sbjct: 114 ----IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK--------EGISD 158
Query: 280 SARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTY 339
A F GT YL PE + A D + G+V+ E++ GR Y
Sbjct: 159 GATMKXF--------CGTPEYLAPEVLEDNDYGRA-VDWWGLGVVMYEMMCGRLPF---Y 206
Query: 340 PDD-----QIILLDWI---RRLSDEGKVLQAG 363
D ++IL++ I R LS E K L AG
Sbjct: 207 NQDHERLFELILMEEIRFPRTLSPEAKSLLAG 238
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 16/103 (15%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ SA+ YLH + V++R+I + LD D + ++ F L ++ S
Sbjct: 114 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC----------KEGISDGA 160
Query: 685 SVRGIFG---YMSPEYIESGEATSMADVYSFGVVVLEVVTGQM 724
+++ G Y++PE +E + D + GVV+ E++ G++
Sbjct: 161 TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 203
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 112/272 (41%), Gaps = 51/272 (18%)
Query: 108 IGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVA------ 161
+ N FD ++LG G FGKV + G A+K L R E A + VA
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKIL-----RKEVIIAKDEVAHTVTES 56
Query: 162 --VAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKK 219
+ + RH L L+ D+L V +Y L L R E A +
Sbjct: 57 RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE--- 113
Query: 220 IIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTS 279
+ +AL YLH + +++RD+K N+MLD + ++ DFGL + + +
Sbjct: 114 ----IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK--------EGISD 158
Query: 280 SARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTY 339
A F GT YL PE + A D + G+V+ E++ GR Y
Sbjct: 159 GATMKXF--------CGTPEYLAPEVLEDNDYGRA-VDWWGLGVVMYEMMCGRLPF---Y 206
Query: 340 PDD-----QIILLDWI---RRLSDEGKVLQAG 363
D ++IL++ I R LS E K L AG
Sbjct: 207 NQDHERLFELILMEEIRFPRTLSPEAKSLLAG 238
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 16/103 (15%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ SA+ YLH + V++R+I + LD D + ++ F L ++ S
Sbjct: 114 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC----------KEGISDGA 160
Query: 685 SVRGIFG---YMSPEYIESGEATSMADVYSFGVVVLEVVTGQM 724
+++ G Y++PE +E + D + GVV+ E++ G++
Sbjct: 161 TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 203
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 112/272 (41%), Gaps = 51/272 (18%)
Query: 108 IGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVA------ 161
+ N FD ++LG G FGKV + G A+K L R E A + VA
Sbjct: 7 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKIL-----RKEVIIAKDEVAHTVTES 61
Query: 162 --VAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKK 219
+ + RH L L+ D+L V +Y L L R E A +
Sbjct: 62 RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE--- 118
Query: 220 IIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTS 279
+ +AL YLH + +++RD+K N+MLD + ++ DFGL + + +
Sbjct: 119 ----IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK--------EGISD 163
Query: 280 SARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTY 339
A F GT YL PE + A D + G+V+ E++ GR Y
Sbjct: 164 GATMKXF--------CGTPEYLAPEVLEDNDYGRA-VDWWGLGVVMYEMMCGRLPF---Y 211
Query: 340 PDD-----QIILLDWI---RRLSDEGKVLQAG 363
D ++IL++ I R LS E K L AG
Sbjct: 212 NQDHERLFELILMEEIRFPRTLSPEAKSLLAG 243
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 16/103 (15%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ SA+ YLH + V++R+I + LD D + ++ F L ++ S
Sbjct: 119 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC----------KEGISDGA 165
Query: 685 SVRGIFG---YMSPEYIESGEATSMADVYSFGVVVLEVVTGQM 724
+++ G Y++PE +E + D + GVV+ E++ G++
Sbjct: 166 TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 208
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 99/219 (45%), Gaps = 38/219 (17%)
Query: 119 LGSGGFGKVYRAVLPSD---GTVVAVK-CLAEKGERFEKTFAAELVAVAHLRHRNLVRLR 174
+G G FG V++ + S VA+K C + + F E + + H ++V+L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 175 GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQ 234
G + E+ + ++ + L L R +L+ A+ + + + L+ AL YL +
Sbjct: 78 G-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQ------LSTALAYLESK 130
Query: 235 LETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRI 294
+ +HRD+ NV++ S +LGDFGL+R++E ++T
Sbjct: 131 ---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME--------------------DSTXX 167
Query: 295 GGTIGYLPPESFQKGSVA----TAKSDVFSFGIVVLEVV 329
+ G LP + S+ T+ SDV+ FG+ + E++
Sbjct: 168 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 94/204 (46%), Gaps = 19/204 (9%)
Query: 521 VAEMDFGTAYQGFL----DNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLC 576
+ E FG +QG + V +K ++R +F E + + H ++V+L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 577 GWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEW 636
G TE +++ + + S L S++ + ++ L++A+ YL
Sbjct: 78 GVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQ------LSTALAYLE--- 128
Query: 637 NEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPE 696
+++ +HR+I + + + + +LG F L+ ++ D KA+ G ++ +M+PE
Sbjct: 129 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTXXKASKGKLPIK----WMAPE 182
Query: 697 YIESGEATSMADVYSFGVVVLEVV 720
I TS +DV+ FGV + E++
Sbjct: 183 SINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 25/225 (11%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLV 171
+D + LG G G+V AV VAVK + ++ + E+ L H N+V
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
+ G H + + Y ++ S + R ++ P ++ L A + YL
Sbjct: 68 KFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP----DAQRFFHQLMAGVVYL 120
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
H I HRD+K N++LD + N ++ DFGLA T N++ L
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLA------------TVFRYNNRERL--L 163
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
++ GT+ Y+ PE ++ DV+S GIV+ +++G D
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 108/237 (45%), Gaps = 42/237 (17%)
Query: 108 IGSNGFDEDEVLGSGGFGKVY--RAVLPSD-GTVVAVKCL-----AEKGERFEKTFAAEL 159
+G F+ +VLG+G +GKV+ R + D G + A+K L +K + E T E
Sbjct: 51 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHT-RTER 109
Query: 160 VAVAHLRHRN-LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRK 218
+ H+R LV L E +L L+ DY+ L L +R E +
Sbjct: 110 QVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQI------ 163
Query: 219 KIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRT 278
+ + AL +LH+ II+RD+K N++LDS + L DFGL++
Sbjct: 164 -YVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSK------------ 207
Query: 279 SSARNHQFHLAETTR---IGGTIGYLPPESFQKGSVATAKS-DVFSFGIVVLEVVSG 331
+F ET R GTI Y+ P+ + G K+ D +S G+++ E+++G
Sbjct: 208 ------EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 99/223 (44%), Gaps = 28/223 (12%)
Query: 116 DEVLGSGGFGKVYRAVLPSDG-------TVVAVKCLAEKGERFEKTFAAELVAVAHLRHR 168
+E LG G F K+++ V G T V +K L + + ++F ++ L H+
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
+LV G C D+ +LV +++ SLD L ++ +N +N + ++ + LA A+
Sbjct: 73 HLVLNYGVCFCGDENILVQEFVKFGSLDTYL-KKNKNC-----INILWKLEVAKQLAWAM 126
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
H+L E +IH +V N++L + + + G+ + + + + +
Sbjct: 127 HFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQER--- 180
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
I ++PPE + +D +SFG + E+ SG
Sbjct: 181 ---------IPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 97/203 (47%), Gaps = 33/203 (16%)
Query: 78 SGLFHDMEGVQMSEKV-----GGDNPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVL 132
S + D +G +++ V G D P+ SY + +V+G+G FG VY+A L
Sbjct: 4 SKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTD----------TKVIGNGSFGVVYQAKL 53
Query: 133 PSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLR------GWCVHEDQLLLV 186
G +VA+K + + +RF+ EL + L H N+VRLR G E L LV
Sbjct: 54 CDSGELVAIKKVLQD-KRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 109
Query: 187 YDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKT 246
DY+P ++ RV R + P+ + K + L +L Y+H I HRD+K
Sbjct: 110 LDYVPE-TVYRVA-RHYSRAKQTLPVIYV--KLYMYQLFRSLAYIH---SFGICHRDIKP 162
Query: 247 SNVMLDSQYNA-RLGDFGLARWL 268
N++LD +L DFG A+ L
Sbjct: 163 QNLLLDPDTAVLKLCDFGSAKQL 185
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 40/225 (17%)
Query: 514 NFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSN-ELQNLARLRHRN 571
++++++ + FG YQ L D+ + V +K++ K RF N ELQ + +L H N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 86
Query: 572 LVQLCGWCTEQGE------MLVIYDY---SATRILSHLLFHNNHRIGHSILQWHHRYNII 622
+V+L + GE + ++ DY + R+ H + + I + Y +
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLF 144
Query: 623 KSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNP-RLGSFALAEFLTRNDHGHRKATS 681
+SLA Y+H + + HR+I + LDPD +L F A+ L R
Sbjct: 145 RSLA----YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---------- 187
Query: 682 GNRSVRGIFG--YMSPEYI-ESGEATSMADVYSFGVVVLEVVTGQ 723
G +V I Y +PE I + + TS DV+S G V+ E++ GQ
Sbjct: 188 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 33/198 (16%)
Query: 83 DMEGVQMSEKV-----GGDNPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGT 137
D +G +++ V G D P+ SY + +V+G+G FG VY+A L G
Sbjct: 31 DKDGSKVTTVVATPGQGPDRPQEVSYTDT----------KVIGNGSFGVVYQAKLCDSGE 80
Query: 138 VVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLR------GWCVHEDQLLLVYDYMP 191
+VA+K + + +RF+ EL + L H N+VRLR G E L LV DY+P
Sbjct: 81 LVAIKKVLQD-KRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 136
Query: 192 NRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVML 251
++ RV R + P+ + K + L +L Y+H I HRD+K N++L
Sbjct: 137 E-TVYRVA-RHYSRAKQTLPVIYV--KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLL 189
Query: 252 DSQYNA-RLGDFGLARWL 268
D +L DFG A+ L
Sbjct: 190 DPDTAVLKLCDFGSAKQL 207
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 40/225 (17%)
Query: 514 NFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSN-ELQNLARLRHRN 571
++++++ + FG YQ L D+ + V +K++ K RF N ELQ + +L H N
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 108
Query: 572 LVQLCGWCTEQGE------MLVIYDY---SATRILSHLLFHNNHRIGHSILQWHHRYNII 622
+V+L + GE + ++ DY + R+ H + + I + Y +
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLF 166
Query: 623 KSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNP-RLGSFALAEFLTRNDHGHRKATS 681
+SLA Y+H + + HR+I + LDPD +L F A+ L R
Sbjct: 167 RSLA----YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---------- 209
Query: 682 GNRSVRGIFG--YMSPEYI-ESGEATSMADVYSFGVVVLEVVTGQ 723
G +V I Y +PE I + + TS DV+S G V+ E++ GQ
Sbjct: 210 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 33/198 (16%)
Query: 83 DMEGVQMSEKV-----GGDNPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGT 137
D +G +++ V G D P+ SY + +V+G+G FG VY+A L G
Sbjct: 25 DKDGSKVTTVVATPGQGPDRPQEVSYTDT----------KVIGNGSFGVVYQAKLCDSGE 74
Query: 138 VVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLR------GWCVHEDQLLLVYDYMP 191
+VA+K + + +RF+ EL + L H N+VRLR G E L LV DY+P
Sbjct: 75 LVAIKKVLQD-KRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 130
Query: 192 NRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVML 251
++ RV R + P+ + K + L +L Y+H I HRD+K N++L
Sbjct: 131 E-TVYRVA-RHYSRAKQTLPVIYV--KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLL 183
Query: 252 DSQYNA-RLGDFGLARWL 268
D +L DFG A+ L
Sbjct: 184 DPDTAVLKLCDFGSAKQL 201
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 40/225 (17%)
Query: 514 NFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSN-ELQNLARLRHRN 571
++++++ + FG YQ L D+ + V +K++ K RF N ELQ + +L H N
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 102
Query: 572 LVQLCGWCTEQGE------MLVIYDY---SATRILSHLLFHNNHRIGHSILQWHHRYNII 622
+V+L + GE + ++ DY + R+ H + + I + Y +
Sbjct: 103 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLF 160
Query: 623 KSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNP-RLGSFALAEFLTRNDHGHRKATS 681
+SLA Y+H + + HR+I + LDPD +L F A+ L R
Sbjct: 161 RSLA----YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---------- 203
Query: 682 GNRSVRGIFG--YMSPEYI-ESGEATSMADVYSFGVVVLEVVTGQ 723
G +V I Y +PE I + + TS DV+S G V+ E++ GQ
Sbjct: 204 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 33/198 (16%)
Query: 83 DMEGVQMSEKV-----GGDNPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGT 137
D +G +++ V G D P+ SY + +V+G+G FG VY+A L G
Sbjct: 33 DKDGSKVTTVVATPGQGPDRPQEVSYTDT----------KVIGNGSFGVVYQAKLCDSGE 82
Query: 138 VVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLR------GWCVHEDQLLLVYDYMP 191
+VA+K + + +RF+ EL + L H N+VRLR G E L LV DY+P
Sbjct: 83 LVAIKKVLQD-KRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 138
Query: 192 NRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVML 251
++ RV R + P+ + K + L +L Y+H I HRD+K N++L
Sbjct: 139 E-TVYRVA-RHYSRAKQTLPVIYV--KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLL 191
Query: 252 DSQYNA-RLGDFGLARWL 268
D +L DFG A+ L
Sbjct: 192 DPDTAVLKLCDFGSAKQL 209
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 40/225 (17%)
Query: 514 NFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSN-ELQNLARLRHRN 571
++++++ + FG YQ L D+ + V +K++ K RF N ELQ + +L H N
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 110
Query: 572 LVQLCGWCTEQGE------MLVIYDY---SATRILSHLLFHNNHRIGHSILQWHHRYNII 622
+V+L + GE + ++ DY + R+ H + + I + Y +
Sbjct: 111 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLF 168
Query: 623 KSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNP-RLGSFALAEFLTRNDHGHRKATS 681
+SLA Y+H + + HR+I + LDPD +L F A+ L R
Sbjct: 169 RSLA----YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---------- 211
Query: 682 GNRSVRGIFG--YMSPEYI-ESGEATSMADVYSFGVVVLEVVTGQ 723
G +V I Y +PE I + + TS DV+S G V+ E++ GQ
Sbjct: 212 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 33/198 (16%)
Query: 83 DMEGVQMSEKV-----GGDNPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGT 137
D +G +++ V G D P+ SY + +V+G+G FG VY+A L G
Sbjct: 31 DKDGSKVTTVVATPGQGPDRPQEVSYTDT----------KVIGNGSFGVVYQAKLCDSGE 80
Query: 138 VVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLR------GWCVHEDQLLLVYDYMP 191
+VA+K + + +RF+ EL + L H N+VRLR G E L LV DY+P
Sbjct: 81 LVAIKKVLQD-KRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 136
Query: 192 NRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVML 251
++ RV R + P+ + K + L +L Y+H I HRD+K N++L
Sbjct: 137 E-TVYRVA-RHYSRAKQTLPVIYV--KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLL 189
Query: 252 DSQYNA-RLGDFGLARWL 268
D +L DFG A+ L
Sbjct: 190 DPDTAVLKLCDFGSAKQL 207
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 40/225 (17%)
Query: 514 NFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSN-ELQNLARLRHRN 571
++++++ + FG YQ L D+ + V +K++ K RF N ELQ + +L H N
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 108
Query: 572 LVQLCGWCTEQGE------MLVIYDY---SATRILSHLLFHNNHRIGHSILQWHHRYNII 622
+V+L + GE + ++ DY + R+ H + + I + Y +
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLF 166
Query: 623 KSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNP-RLGSFALAEFLTRNDHGHRKATS 681
+SLA Y+H + + HR+I + LDPD +L F A+ L R
Sbjct: 167 RSLA----YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---------- 209
Query: 682 GNRSVRGIFG--YMSPEYI-ESGEATSMADVYSFGVVVLEVVTGQ 723
G +V I Y +PE I + + TS DV+S G V+ E++ GQ
Sbjct: 210 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 33/198 (16%)
Query: 83 DMEGVQMSEKV-----GGDNPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGT 137
D +G +++ V G D P+ SY + +V+G+G FG VY+A L G
Sbjct: 76 DKDGSKVTTVVATPGQGPDRPQEVSYTDT----------KVIGNGSFGVVYQAKLCDSGE 125
Query: 138 VVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLR------GWCVHEDQLLLVYDYMP 191
+VA+K + + +RF+ EL + L H N+VRLR G E L LV DY+P
Sbjct: 126 LVAIKKVLQD-KRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 181
Query: 192 NRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVML 251
++ RV R + P+ + K + L +L Y+H I HRD+K N++L
Sbjct: 182 E-TVYRVA-RHYSRAKQTLPVIYV--KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLL 234
Query: 252 DSQYNA-RLGDFGLARWL 268
D +L DFG A+ L
Sbjct: 235 DPDTAVLKLCDFGSAKQL 252
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 40/225 (17%)
Query: 514 NFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSN-ELQNLARLRHRN 571
++++++ + FG YQ L D+ + V +K++ K RF N ELQ + +L H N
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 153
Query: 572 LVQLCGWCTEQGE------MLVIYDY---SATRILSHLLFHNNHRIGHSILQWHHRYNII 622
+V+L + GE + ++ DY + R+ H + + I + Y +
Sbjct: 154 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLF 211
Query: 623 KSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNP-RLGSFALAEFLTRNDHGHRKATS 681
+SLA Y+H + + HR+I + LDPD +L F A+ L R
Sbjct: 212 RSLA----YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---------- 254
Query: 682 GNRSVRGIFG--YMSPEYI-ESGEATSMADVYSFGVVVLEVVTGQ 723
G +V I Y +PE I + + TS DV+S G V+ E++ GQ
Sbjct: 255 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 33/198 (16%)
Query: 83 DMEGVQMSEKV-----GGDNPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGT 137
D +G +++ V G D P+ SY + +V+G+G FG VY+A L G
Sbjct: 35 DKDGSKVTTVVATPGQGPDRPQEVSYTDT----------KVIGNGSFGVVYQAKLCDSGE 84
Query: 138 VVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLR------GWCVHEDQLLLVYDYMP 191
+VA+K + + +RF+ EL + L H N+VRLR G E L LV DY+P
Sbjct: 85 LVAIKKVLQD-KRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 140
Query: 192 NRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVML 251
++ RV R + P+ + K + L +L Y+H I HRD+K N++L
Sbjct: 141 E-TVYRVA-RHYSRAKQTLPVIYV--KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLL 193
Query: 252 DSQYNA-RLGDFGLARWL 268
D +L DFG A+ L
Sbjct: 194 DPDTAVLKLCDFGSAKQL 211
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 40/225 (17%)
Query: 514 NFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSN-ELQNLARLRHRN 571
++++++ + FG YQ L D+ + V +K++ K RF N ELQ + +L H N
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 112
Query: 572 LVQLCGWCTEQGE------MLVIYDY---SATRILSHLLFHNNHRIGHSILQWHHRYNII 622
+V+L + GE + ++ DY + R+ H + + I + Y +
Sbjct: 113 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLF 170
Query: 623 KSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNP-RLGSFALAEFLTRNDHGHRKATS 681
+SLA Y+H + + HR+I + LDPD +L F A+ L R
Sbjct: 171 RSLA----YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---------- 213
Query: 682 GNRSVRGIFG--YMSPEYI-ESGEATSMADVYSFGVVVLEVVTGQ 723
G +V I Y +PE I + + TS DV+S G V+ E++ GQ
Sbjct: 214 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 32/218 (14%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGE--RFEKTFAAELVAVAHLRHRNLVRLRG 175
++G G +G V + G +VA+K E + +K E+ + LRH NLV L
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 176 WCVHEDQLLLVYDYMPNRSLDRV-LFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQ 234
C + + LV++++ + LD + LF L+++ +K + + + + H
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDLELF--------PNGLDYQVVQKYLFQIINGIGFCHSH 143
Query: 235 LETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRI 294
IIHRD+K N+++ +L DFG A RT +A + TR
Sbjct: 144 ---NIIHRDIKPENILVSQSGVVKLCDFGFA-----------RTLAAPGEVYDDEVATR- 188
Query: 295 GGTIGYLPPESFQKGSVATAKS-DVFSFGIVVLEVVSG 331
Y PE G V K+ DV++ G +V E+ G
Sbjct: 189 ----WYRAPELLV-GDVKYGKAVDVWAIGCLVTEMFMG 221
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 84/198 (42%), Gaps = 30/198 (15%)
Query: 528 TAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLV 587
A + FL++ +VK++ M E++ L +LRH NLV L C ++ +
Sbjct: 53 VAIKKFLESDDDKMVKKIAM-----------REIKLLKQLRHENLVNLLEVCKKKKRWYL 101
Query: 588 IYDYSATRILSHL-LFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNIT 646
++++ IL L LF N + + ++Q + + II + I + H + +IHR+I
Sbjct: 102 VFEFVDHTILDDLELFPNG--LDYQVVQ-KYLFQII----NGIGFCH---SHNIIHRDIK 151
Query: 647 SSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSM 706
I + +L F A L + + Y +PE +
Sbjct: 152 PENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATR-------WYRAPELLVGDVKYGK 204
Query: 707 A-DVYSFGVVVLEVVTGQ 723
A DV++ G +V E+ G+
Sbjct: 205 AVDVWAIGCLVTEMFMGE 222
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 33/198 (16%)
Query: 83 DMEGVQMSEKV-----GGDNPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGT 137
D +G +++ V G D P+ SY + +V+G+G FG VY+A L G
Sbjct: 9 DKDGSKVTTVVATPGQGPDRPQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGE 58
Query: 138 VVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLR------GWCVHEDQLLLVYDYMP 191
+VA+K + + +RF+ EL + L H N+VRLR G E L LV DY+P
Sbjct: 59 LVAIKKVLQD-KRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 114
Query: 192 NRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVML 251
++ RV R + P+ + K + L +L Y+H I HRD+K N++L
Sbjct: 115 E-TVYRVA-RHYSRAKQTLPVIYV--KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLL 167
Query: 252 DSQYNA-RLGDFGLARWL 268
D +L DFG A+ L
Sbjct: 168 DPDTAVLKLCDFGSAKQL 185
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 40/225 (17%)
Query: 514 NFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSN-ELQNLARLRHRN 571
++++++ + FG YQ L D+ + V +K++ K RF N ELQ + +L H N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 86
Query: 572 LVQLCGWCTEQGE------MLVIYDY---SATRILSHLLFHNNHRIGHSILQWHHRYNII 622
+V+L + GE + ++ DY + R+ H + + I + Y +
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLF 144
Query: 623 KSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNP-RLGSFALAEFLTRNDHGHRKATS 681
+SLA Y+H + + HR+I + LDPD +L F A+ L R
Sbjct: 145 RSLA----YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---------- 187
Query: 682 GNRSVRGIFG--YMSPEYI-ESGEATSMADVYSFGVVVLEVVTGQ 723
G +V I Y +PE I + + TS DV+S G V+ E++ GQ
Sbjct: 188 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 119/262 (45%), Gaps = 50/262 (19%)
Query: 83 DMEGVQMSEKV-----GGDNPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGT 137
D +G +++ V G D P+ SY + +V+G+G FG VY+A L G
Sbjct: 5 DKDGSKVTTVVATPGQGPDRPQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGE 54
Query: 138 VVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLR------GWCVHEDQLLLVYDYMP 191
+VA+K + + +RF+ EL + L H N+VRLR G E L LV DY+P
Sbjct: 55 LVAIKKVLQ-DKRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 110
Query: 192 NRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVML 251
++ RV R + P+ + K + L +L Y+H I HRD+K N++L
Sbjct: 111 E-TVYRVA-RHYSRAKQTLPVIYV--KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLL 163
Query: 252 DSQYNA-RLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGS 310
D +L DFG A+ L ++ + S + + E I G Y
Sbjct: 164 DPDTAVLKLCDFGSAKQL---VRGEPNVSXICSRYYRAPEL--IFGATDY---------- 208
Query: 311 VATAKSDVFSFGIVVLEVVSGR 332
T+ DV+S G V+ E++ G+
Sbjct: 209 --TSSIDVWSAGCVLAELLLGQ 228
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 40/225 (17%)
Query: 514 NFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSN-ELQNLARLRHRN 571
++++++ + FG YQ L D+ + V +K++ K RF N ELQ + +L H N
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 82
Query: 572 LVQLCGWCTEQGE------MLVIYDY---SATRILSHLLFHNNHRIGHSILQWHHRYNII 622
+V+L + GE + ++ DY + R+ H + + I + Y +
Sbjct: 83 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLF 140
Query: 623 KSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNP-RLGSFALAEFLTRNDHGHRKATS 681
+SLA Y+H + + HR+I + LDPD +L F A+ L R
Sbjct: 141 RSLA----YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---------- 183
Query: 682 GNRSVRGIFG--YMSPEYI-ESGEATSMADVYSFGVVVLEVVTGQ 723
G +V I Y +PE I + + TS DV+S G V+ E++ GQ
Sbjct: 184 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 98/235 (41%), Gaps = 36/235 (15%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAA---ELVAVAHLRHRNLVRL 173
+ LG G FGKV G VAVK L + R E+ + RH ++++L
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 174 RGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHE 233
+ +V +Y+ L + + L+ ++ +++ + + + + Y H
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYICKN-------GRLDEKESRRLFQQILSGVDYCHR 134
Query: 234 QLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTR 293
+ ++HRD+K NV+LD+ NA++ DFGL+ + E R
Sbjct: 135 HM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD------------------GEFLR 173
Query: 294 IG-GTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
G+ Y PE A + D++S G+++ ++ G L + DD + L
Sbjct: 174 XSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGT----LPFDDDHVPTL 224
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 81/192 (42%), Gaps = 22/192 (11%)
Query: 540 VLVKRLGMSKCPALRT--RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRIL 597
V VK L K +L + E+QNL RH ++++L + ++ ++ +Y + L
Sbjct: 44 VAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGEL 103
Query: 598 SHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMN 657
+ N L + + + S + Y H V+HR++ + LD MN
Sbjct: 104 FDYICKNGR------LDEKESRRLFQQILSGVDYCHR---HMVVHRDLKPENVLLDAHMN 154
Query: 658 PRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGE--ATSMADVYSFGVV 715
++ F L+ ++ + S N Y +PE I SG A D++S GV+
Sbjct: 155 AKIADFGLSNMMSDGEFLRXSCGSPN--------YAAPEVI-SGRLYAGPEVDIWSSGVI 205
Query: 716 VLEVVTGQMAVD 727
+ ++ G + D
Sbjct: 206 LYALLCGTLPFD 217
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 33/198 (16%)
Query: 83 DMEGVQMSEKV-----GGDNPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGT 137
D +G +++ V G D P+ SY + +V+G+G FG VY+A L G
Sbjct: 10 DKDGSKVTTVVATPGQGPDRPQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGE 59
Query: 138 VVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLR------GWCVHEDQLLLVYDYMP 191
+VA+K + + +RF+ EL + L H N+VRLR G E L LV DY+P
Sbjct: 60 LVAIKKVLQD-KRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 115
Query: 192 NRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVML 251
++ RV R + P+ + K + L +L Y+H I HRD+K N++L
Sbjct: 116 E-TVYRVA-RHYSRAKQTLPVIYV--KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLL 168
Query: 252 DSQYNA-RLGDFGLARWL 268
D +L DFG A+ L
Sbjct: 169 DPDTAVLKLCDFGSAKQL 186
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 40/225 (17%)
Query: 514 NFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSN-ELQNLARLRHRN 571
++++++ + FG YQ L D+ + V +K++ K RF N ELQ + +L H N
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 87
Query: 572 LVQLCGWCTEQGE------MLVIYDY---SATRILSHLLFHNNHRIGHSILQWHHRYNII 622
+V+L + GE + ++ DY + R+ H + + I + Y +
Sbjct: 88 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLF 145
Query: 623 KSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNP-RLGSFALAEFLTRNDHGHRKATS 681
+SLA Y+H + + HR+I + LDPD +L F A+ L R
Sbjct: 146 RSLA----YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---------- 188
Query: 682 GNRSVRGIFG--YMSPEYI-ESGEATSMADVYSFGVVVLEVVTGQ 723
G +V I Y +PE I + + TS DV+S G V+ E++ GQ
Sbjct: 189 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 33/198 (16%)
Query: 83 DMEGVQMSEKV-----GGDNPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGT 137
D +G +++ V G D P+ SY + +V+G+G FG VY+A L G
Sbjct: 16 DKDGSKVTTVVATPGQGPDRPQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGE 65
Query: 138 VVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLR------GWCVHEDQLLLVYDYMP 191
+VA+K + + +RF+ EL + L H N+VRLR G E L LV DY+P
Sbjct: 66 LVAIKKVLQ-DKRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 121
Query: 192 NRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVML 251
++ RV R + P+ + K + L +L Y+H I HRD+K N++L
Sbjct: 122 E-TVYRVA-RHYSRAKQTLPVIYV--KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLL 174
Query: 252 DSQYNA-RLGDFGLARWL 268
D +L DFG A+ L
Sbjct: 175 DPDTAVLKLCDFGSAKQL 192
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 40/225 (17%)
Query: 514 NFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSN-ELQNLARLRHRN 571
++++++ + FG YQ L D+ + V +K++ K RF N ELQ + +L H N
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 93
Query: 572 LVQLCGWCTEQGE------MLVIYDY---SATRILSHLLFHNNHRIGHSILQWHHRYNII 622
+V+L + GE + ++ DY + R+ H + + I + Y +
Sbjct: 94 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLF 151
Query: 623 KSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNP-RLGSFALAEFLTRNDHGHRKATS 681
+SLA Y+H + + HR+I + LDPD +L F A+ L R
Sbjct: 152 RSLA----YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---------- 194
Query: 682 GNRSVRGIFG--YMSPEYI-ESGEATSMADVYSFGVVVLEVVTGQ 723
G +V I Y +PE I + + TS DV+S G V+ E++ GQ
Sbjct: 195 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 112/246 (45%), Gaps = 45/246 (18%)
Query: 94 GGDNPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEK 153
G D P+ SY + +V+G+G FG VY+A L G +VA+K + + +RF+
Sbjct: 13 GPDRPQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKN 61
Query: 154 TFAAELVAVAHLRHRNLVRLR------GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLE 207
EL + L H N+VRLR G E L LV DY+P ++ RV R +
Sbjct: 62 R---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVA-RHYSRAK 116
Query: 208 AAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNA-RLGDFGLAR 266
P+ + K + L +L Y+H I HRD+K N++LD +L DFG A+
Sbjct: 117 QTLPVIYV--KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
Query: 267 WLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVL 326
L ++ + S + + E I G Y T+ DV+S G V+
Sbjct: 172 QL---VRGEPNVSXICSRYYRAPEL--IFGATDY------------TSSIDVWSAGCVLA 214
Query: 327 EVVSGR 332
E++ G+
Sbjct: 215 ELLLGQ 220
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 40/225 (17%)
Query: 514 NFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSN-ELQNLARLRHRN 571
++++++ + FG YQ L D+ + V +K++ K RF N ELQ + +L H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 74
Query: 572 LVQLCGWCTEQGE------MLVIYDY---SATRILSHLLFHNNHRIGHSILQWHHRYNII 622
+V+L + GE + ++ DY + R+ H + + I + Y +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLF 132
Query: 623 KSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNP-RLGSFALAEFLTRNDHGHRKATS 681
+SLA Y+H + + HR+I + LDPD +L F A+ L R
Sbjct: 133 RSLA----YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---------- 175
Query: 682 GNRSVRGIFG--YMSPEYI-ESGEATSMADVYSFGVVVLEVVTGQ 723
G +V I Y +PE I + + TS DV+S G V+ E++ GQ
Sbjct: 176 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 23/163 (14%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-----AEKGERFEKTFAAELVAVAHLRH 167
+++ + LG G F VY+A + +VA+K + +E + +T E+ + L H
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNR----SLDRVLFRRPENLEAAAPLNWEQRKKIIRG 223
N++ L H+ + LV+D+M D L P +++A + +
Sbjct: 72 PNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQ-------- 123
Query: 224 LAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266
L YLH+ I+HRD+K +N++LD +L DFGLA+
Sbjct: 124 ---GLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAK 160
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 35/238 (14%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNL 170
+++ E +G G +G V++A +VA+K L + E + E+ + L+H+N+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
VRL + +L LV+++ D+ L + ++ L+ E K + L L +
Sbjct: 64 VRLHDVLHSDKKLTLVFEFC-----DQDLKKYFDSCNGD--LDPEIVKSFLFQLLKGLGF 116
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
H + ++HRD+K N++++ +L DFGLAR +R SA
Sbjct: 117 CHSR---NVLHRDLKPQNLLINRNGELKLADFGLAR----AFGIPVRCYSAE-------- 161
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP----DDQI 344
T+ Y PP+ + + D++S G + E+ + R + +P DDQ+
Sbjct: 162 ----VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPL---FPGNDVDDQL 212
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 96/230 (41%), Gaps = 35/230 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVR 172
+D +V+G G V R V + G AVK + ER +L V R
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLS---PEQLEEVREATRRETHI 152
Query: 173 LRGWCVHEDQLLLVYDYMPNRSLDRV--LFRRPE---NLEAAAPLNWEQRKKIIRGLAAA 227
LR H + L+ Y + + V L R+ E L L+ ++ + I+R L A
Sbjct: 153 LRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEA 212
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
+ +LH I+HRD+K N++LD RL DFG + LE
Sbjct: 213 VSFLHA---NNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEP----------------- 252
Query: 288 LAETTR-IGGTIGYLPPESFQKGSVAT-----AKSDVFSFGIVVLEVVSG 331
E R + GT GYL PE + T + D+++ G+++ +++G
Sbjct: 253 -GEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 88/182 (48%), Gaps = 28/182 (15%)
Query: 94 GGDNPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEK 153
G D P+ SY + +V+G+G FG VY+A L G +VA+K + + G+ F+
Sbjct: 13 GPDRPQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-GKAFKN 61
Query: 154 TFAAELVAVAHLRHRNLVRLR------GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLE 207
EL + L H N+VRLR G E L LV DY+P ++ RV R +
Sbjct: 62 R---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVA-RHYSRAK 116
Query: 208 AAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNA-RLGDFGLAR 266
P+ + K + L +L Y+H I HRD+K N++LD +L DFG A+
Sbjct: 117 QTLPVIYV--KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
Query: 267 WL 268
L
Sbjct: 172 QL 173
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 103/222 (46%), Gaps = 34/222 (15%)
Query: 514 NFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNL 572
++++++ + FG YQ L D+ + V +K++ K A + R ELQ + +L H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGK--AFKNR---ELQIMRKLDHCNI 75
Query: 573 VQLCGWCTEQGE------MLVIYDY---SATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
V+L + GE + ++ DY + R+ H + + I + Y + +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLFR 133
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNP-RLGSFALAEFLTRNDHGHRKATSG 682
SLA Y+H + + HR+I + LDPD +L F A+ L R +
Sbjct: 134 SLA----YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--------P 178
Query: 683 NRSVRGIFGYMSPEYI-ESGEATSMADVYSFGVVVLEVVTGQ 723
N S Y +PE I + + TS DV+S G V+ E++ GQ
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 88/182 (48%), Gaps = 28/182 (15%)
Query: 94 GGDNPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEK 153
G D P+ SY + +V+G+G FG VY+A L G +VA+K + + +RF+
Sbjct: 18 GPDRPQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-KRFKN 66
Query: 154 TFAAELVAVAHLRHRNLVRLR------GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLE 207
EL + L H N+VRLR G E L LV DY+P ++ RV R +
Sbjct: 67 R---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVA-RHYSRAK 121
Query: 208 AAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNA-RLGDFGLAR 266
P+ + K + L +L Y+H I HRD+K N++LD +L DFG A+
Sbjct: 122 QTLPVIYV--KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 176
Query: 267 WL 268
L
Sbjct: 177 QL 178
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 40/225 (17%)
Query: 514 NFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSN-ELQNLARLRHRN 571
++++++ + FG YQ L D+ + V +K++ K RF N ELQ + +L H N
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 79
Query: 572 LVQLCGWCTEQGE------MLVIYDY---SATRILSHLLFHNNHRIGHSILQWHHRYNII 622
+V+L + GE + ++ DY + R+ H + + I + Y +
Sbjct: 80 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLF 137
Query: 623 KSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNP-RLGSFALAEFLTRNDHGHRKATS 681
+SLA Y+H + + HR+I + LDPD +L F A+ L R
Sbjct: 138 RSLA----YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---------- 180
Query: 682 GNRSVRGIFG--YMSPEYI-ESGEATSMADVYSFGVVVLEVVTGQ 723
G +V I Y +PE I + + TS DV+S G V+ E++ GQ
Sbjct: 181 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 112/246 (45%), Gaps = 45/246 (18%)
Query: 94 GGDNPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEK 153
G D P+ SY + +V+G+G FG VY+A L G +VA+K + + +RF+
Sbjct: 14 GPDRPQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKN 62
Query: 154 TFAAELVAVAHLRHRNLVRLR------GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLE 207
EL + L H N+VRLR G E L LV DY+P ++ RV R +
Sbjct: 63 R---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVA-RHYSRAK 117
Query: 208 AAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNA-RLGDFGLAR 266
P+ + K + L +L Y+H I HRD+K N++LD +L DFG A+
Sbjct: 118 QTLPVIYV--KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 172
Query: 267 WLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVL 326
L ++ + S + + E I G Y T+ DV+S G V+
Sbjct: 173 QL---VRGEPNVSXICSRYYRAPEL--IFGATDY------------TSSIDVWSAGCVLA 215
Query: 327 EVVSGR 332
E++ G+
Sbjct: 216 ELLLGQ 221
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 40/225 (17%)
Query: 514 NFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSN-ELQNLARLRHRN 571
++++++ + FG YQ L D+ + V +K++ K RF N ELQ + +L H N
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 75
Query: 572 LVQLCGWCTEQGE------MLVIYDY---SATRILSHLLFHNNHRIGHSILQWHHRYNII 622
+V+L + GE + ++ DY + R+ H + + I + Y +
Sbjct: 76 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLF 133
Query: 623 KSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNP-RLGSFALAEFLTRNDHGHRKATS 681
+SLA Y+H + + HR+I + LDPD +L F A+ L R
Sbjct: 134 RSLA----YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---------- 176
Query: 682 GNRSVRGIFG--YMSPEYI-ESGEATSMADVYSFGVVVLEVVTGQ 723
G +V I Y +PE I + + TS DV+S G V+ E++ GQ
Sbjct: 177 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 88/182 (48%), Gaps = 28/182 (15%)
Query: 94 GGDNPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEK 153
G D P+ SY + +V+G+G FG VY+A L G +VA+K + + G+ F+
Sbjct: 13 GPDRPQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-GKAFKN 61
Query: 154 TFAAELVAVAHLRHRNLVRLR------GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLE 207
EL + L H N+VRLR G E L LV DY+P ++ RV R +
Sbjct: 62 R---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVA-RHYSRAK 116
Query: 208 AAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNA-RLGDFGLAR 266
P+ + K + L +L Y+H I HRD+K N++LD +L DFG A+
Sbjct: 117 QTLPVIYV--KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
Query: 267 WL 268
L
Sbjct: 172 QL 173
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 103/222 (46%), Gaps = 34/222 (15%)
Query: 514 NFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNL 572
++++++ + FG YQ L D+ + V +K++ K A + R ELQ + +L H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGK--AFKNR---ELQIMRKLDHCNI 75
Query: 573 VQLCGWCTEQGE------MLVIYDY---SATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
V+L + GE + ++ DY + R+ H + + I + Y + +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLFR 133
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNP-RLGSFALAEFLTRNDHGHRKATSG 682
SLA Y+H + + HR+I + LDPD +L F A+ L R +
Sbjct: 134 SLA----YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--------P 178
Query: 683 NRSVRGIFGYMSPEYI-ESGEATSMADVYSFGVVVLEVVTGQ 723
N S Y +PE I + + TS DV+S G V+ E++ GQ
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 34/218 (15%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCL--AEKGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
+G G +G V++ G +VA+K +E +K E+ + L+H NLV L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 177 CVHEDQLLLVYDYMPN---RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHE 233
+ +L LV++Y + LDR PE+L + + W+ + A+++ H+
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKS--ITWQTLQ--------AVNFCHK 120
Query: 234 QLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTR 293
IHRDVK N+++ +L DFG AR L Y + R ++ +
Sbjct: 121 H---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATR---WYRSPELL 174
Query: 294 IGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
+G T Y PP DV++ G V E++SG
Sbjct: 175 VGDT-QYGPP------------VDVWAIGCVFAELLSG 199
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 84/206 (40%), Gaps = 19/206 (9%)
Query: 520 RVAEMDFGTAYQG-FLDNHQYVLVKRLGMSKC-PALRTRFSNELQNLARLRHRNLVQLCG 577
++ E +G ++ D Q V +K+ S+ P ++ E++ L +L+H NLV L
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 578 WCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWN 637
+ + ++++Y H + H R + + H +I A+ + H+
Sbjct: 70 VFRRKRRLHLVFEYC-----DHTVLHELDRYQRGVPE-HLVKSITWQTLQAVNFCHK--- 120
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPE- 696
IHR++ I + +L F A LT G + R Y SPE
Sbjct: 121 HNCIHRDVKPENILITKHSVIKLCDFGFARLLT----GPSDYYDDEVATR---WYRSPEL 173
Query: 697 YIESGEATSMADVYSFGVVVLEVVTG 722
+ + DV++ G V E+++G
Sbjct: 174 LVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 88/182 (48%), Gaps = 28/182 (15%)
Query: 94 GGDNPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEK 153
G D P+ SY + +V+G+G FG VY+A L G +VA+K + + +RF+
Sbjct: 17 GPDRPQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-KRFKN 65
Query: 154 TFAAELVAVAHLRHRNLVRLR------GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLE 207
EL + L H N+VRLR G E L LV DY+P ++ RV R +
Sbjct: 66 R---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVA-RHYSRAK 120
Query: 208 AAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNA-RLGDFGLAR 266
P+ + K + L +L Y+H I HRD+K N++LD +L DFG A+
Sbjct: 121 QTLPVIYV--KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 175
Query: 267 WL 268
L
Sbjct: 176 QL 177
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 40/225 (17%)
Query: 514 NFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSN-ELQNLARLRHRN 571
++++++ + FG YQ L D+ + V +K++ K RF N ELQ + +L H N
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 78
Query: 572 LVQLCGWCTEQGE------MLVIYDY---SATRILSHLLFHNNHRIGHSILQWHHRYNII 622
+V+L + GE + ++ DY + R+ H + + I + Y +
Sbjct: 79 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLF 136
Query: 623 KSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNP-RLGSFALAEFLTRNDHGHRKATS 681
+SLA Y+H + + HR+I + LDPD +L F A+ L R
Sbjct: 137 RSLA----YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---------- 179
Query: 682 GNRSVRGIFG--YMSPEYI-ESGEATSMADVYSFGVVVLEVVTGQ 723
G +V I Y +PE I + + TS DV+S G V+ E++ GQ
Sbjct: 180 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 97/223 (43%), Gaps = 40/223 (17%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCL--AEKGERFEKTFAAELVAVAHLR------HRNL 170
+G G +G VY+A P G VA+K + G + + VA LR H N+
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76
Query: 171 VRLRGWCV-----HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLA 225
VRL C E ++ LV++++ ++ L L + P L E K ++R
Sbjct: 77 VRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAP-----PPGLPAETIKDLMRQFL 130
Query: 226 AALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQ 285
L +LH I+HRD+K N+++ S +L DFGLAR YQM
Sbjct: 131 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI----YSYQM--------- 174
Query: 286 FHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEV 328
T + T+ Y PE + + AT D++S G + E+
Sbjct: 175 ----ALTPVVVTLWYRAPEVLLQSTYAT-PVDMWSVGCIFAEM 212
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 88/182 (48%), Gaps = 28/182 (15%)
Query: 94 GGDNPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEK 153
G D P+ SY + +V+G+G FG VY+A L G +VA+K + + +RF+
Sbjct: 13 GPDRPQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKN 61
Query: 154 TFAAELVAVAHLRHRNLVRLR------GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLE 207
EL + L H N+VRLR G E L LV DY+P ++ RV R +
Sbjct: 62 R---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVA-RHYSRAK 116
Query: 208 AAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNA-RLGDFGLAR 266
P+ + K + L +L Y+H I HRD+K N++LD +L DFG A+
Sbjct: 117 QTLPVIYV--KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
Query: 267 WL 268
L
Sbjct: 172 QL 173
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 36/223 (16%)
Query: 514 NFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSN-ELQNLARLRHRN 571
++++++ + FG YQ L D+ + V +K++ K RF N ELQ + +L H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 74
Query: 572 LVQLCGWCTEQGE------MLVIYDY---SATRILSHLLFHNNHRIGHSILQWHHRYNII 622
+V+L + GE + ++ DY + R+ H + + I + Y +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLF 132
Query: 623 KSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNP-RLGSFALAEFLTRNDHGHRKATS 681
+SLA Y+H + + HR+I + LDPD +L F A+ L R +
Sbjct: 133 RSLA----YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-------- 177
Query: 682 GNRSVRGIFGYMSPEYI-ESGEATSMADVYSFGVVVLEVVTGQ 723
N S Y +PE I + + TS DV+S G V+ E++ GQ
Sbjct: 178 PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 36/226 (15%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAA---ELVAVAHLRHRNLVRL 173
+ LG G FGKV G VAVK L + R E+ + RH ++++L
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 174 RGWCVHEDQLLLVYDYMPNRSLDRVLFR--RPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
+V +Y+ L + + R E +EA +++ + + +A+ Y
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEA---------RRLFQQILSAVDYC 127
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWL-EHELQYQMRTSSARNHQFHLAE 290
H + ++HRD+K NV+LD+ NA++ DFGL+ + + E +R S
Sbjct: 128 HRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF---LRDSC---------- 171
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
G+ Y PE A + D++S G+++ ++ G D
Sbjct: 172 -----GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 83/193 (43%), Gaps = 24/193 (12%)
Query: 540 VLVKRLGMSKCPALRT--RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY-SATRI 596
V VK L K +L + E+QNL RH ++++L + + ++ +Y S +
Sbjct: 39 VAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGEL 98
Query: 597 LSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDM 656
++ H ++ + + + SA+ Y H V+HR++ + LD M
Sbjct: 99 FDYICKHGR-------VEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHM 148
Query: 657 NPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGE--ATSMADVYSFGV 714
N ++ F L+ ++ + S N Y +PE I SG A D++S GV
Sbjct: 149 NAKIADFGLSNMMSDGEFLRDSCGSPN--------YAAPEVI-SGRLYAGPEVDIWSCGV 199
Query: 715 VVLEVVTGQMAVD 727
++ ++ G + D
Sbjct: 200 ILYALLCGTLPFD 212
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 112/246 (45%), Gaps = 45/246 (18%)
Query: 94 GGDNPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEK 153
G D P+ SY + +V+G+G FG VY+A L G +VA+K + + +RF+
Sbjct: 13 GPDRPQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKN 61
Query: 154 TFAAELVAVAHLRHRNLVRLR------GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLE 207
EL + L H N+VRLR G E L LV DY+P ++ RV R +
Sbjct: 62 R---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVA-RHYSRAK 116
Query: 208 AAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNA-RLGDFGLAR 266
P+ + K + L +L Y+H I HRD+K N++LD +L DFG A+
Sbjct: 117 QTLPVIYV--KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
Query: 267 WLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVL 326
L ++ + S + + E I G Y T+ DV+S G V+
Sbjct: 172 QL---VRGEPNVSXICSRYYRAPEL--IFGATDY------------TSSIDVWSAGCVLA 214
Query: 327 EVVSGR 332
E++ G+
Sbjct: 215 ELLLGQ 220
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 40/225 (17%)
Query: 514 NFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSN-ELQNLARLRHRN 571
++++++ + FG YQ L D+ + V +K++ K RF N ELQ + +L H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 74
Query: 572 LVQLCGWCTEQGE------MLVIYDY---SATRILSHLLFHNNHRIGHSILQWHHRYNII 622
+V+L + GE + ++ DY + R+ H + + I + Y +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLF 132
Query: 623 KSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNP-RLGSFALAEFLTRNDHGHRKATS 681
+SLA Y+H + + HR+I + LDPD +L F A+ L R
Sbjct: 133 RSLA----YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---------- 175
Query: 682 GNRSVRGIFG--YMSPEYI-ESGEATSMADVYSFGVVVLEVVTGQ 723
G +V I Y +PE I + + TS DV+S G V+ E++ GQ
Sbjct: 176 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 105/231 (45%), Gaps = 34/231 (14%)
Query: 108 IGSNGFDEDEVLGSGGFGKVYRAVL--PSDGTV-VAVKCLA----EKGERFEKTFAAELV 160
IG E LG G FG V R PS TV VAVKCL + E + F E+
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD-FIREVN 67
Query: 161 AVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSL-DRVLFRRPENLEAAAPLNWEQRKK 219
A+ L HRNL+RL G V + +V + P SL DR+ R+ + L+ +
Sbjct: 68 AMHSLDHRNLIRLYG-VVLTPPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLS-----R 119
Query: 220 IIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTS 279
+A + YL + + IHRD+ N++L ++ ++GDFGL MR
Sbjct: 120 YAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGL-----------MRAL 165
Query: 280 SARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ + + E ++ + PES + + + A SD + FG+ + E+ +
Sbjct: 166 PQNDDHYVMQEHRKV--PFAWCAPESLKTRTFSHA-SDTWMFGVTLWEMFT 213
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 74/176 (42%), Gaps = 23/176 (13%)
Query: 551 PALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGH 610
P F E+ + L HRNL++L G +V +L L H GH
Sbjct: 56 PEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQ----GH 111
Query: 611 SILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLT 670
+L RY + +A + YL +++ IHR++ + + L ++G F L L
Sbjct: 112 FLLGTLSRYAV--QVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 166
Query: 671 RND-----HGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
+ND HRK F + +PE +++ + +D + FGV + E+ T
Sbjct: 167 QNDDHYVMQEHRKVP---------FAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 105/231 (45%), Gaps = 34/231 (14%)
Query: 108 IGSNGFDEDEVLGSGGFGKVYRAVL--PSDGTV-VAVKCLA----EKGERFEKTFAAELV 160
IG E LG G FG V R PS TV VAVKCL + E + F E+
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD-FIREVN 63
Query: 161 AVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSL-DRVLFRRPENLEAAAPLNWEQRKK 219
A+ L HRNL+RL G V + +V + P SL DR+ R+ + L+ +
Sbjct: 64 AMHSLDHRNLIRLYG-VVLTPPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLS-----R 115
Query: 220 IIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTS 279
+A + YL + + IHRD+ N++L ++ ++GDFGL MR
Sbjct: 116 YAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGL-----------MRAL 161
Query: 280 SARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ + + E ++ + PES + + + A SD + FG+ + E+ +
Sbjct: 162 PQNDDHYVMQEHRKV--PFAWCAPESLKTRTFSHA-SDTWMFGVTLWEMFT 209
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 74/176 (42%), Gaps = 23/176 (13%)
Query: 551 PALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGH 610
P F E+ + L HRNL++L G +V +L L H GH
Sbjct: 52 PEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQ----GH 107
Query: 611 SILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLT 670
+L RY + +A + YL +++ IHR++ + + L ++G F L L
Sbjct: 108 FLLGTLSRYAV--QVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 162
Query: 671 RND-----HGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
+ND HRK F + +PE +++ + +D + FGV + E+ T
Sbjct: 163 QNDDHYVMQEHRKVP---------FAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 101/240 (42%), Gaps = 32/240 (13%)
Query: 96 DNPRIFSYAELYI--GSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEK 153
D P + +L I S+ ++ + +GSG FG +VAVK + E+GE+
Sbjct: 2 DRPAVSGPMDLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI-ERGEKIAA 60
Query: 154 TFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLN 213
E++ LRH N+VR + + L +V +Y LF R N A +
Sbjct: 61 NVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE----LFERICN---AGRFS 113
Query: 214 WEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLG--DFGLARWLEHE 271
++ + + L + + Y H Q+ HRD+K N +LD RL DFG ++
Sbjct: 114 EDEARFFFQQLISGVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICDFGYSK--SSV 168
Query: 272 LQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
L Q +++ GT Y+ PE K +DV+S G+ + ++ G
Sbjct: 169 LHSQPKSTV---------------GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 105/231 (45%), Gaps = 34/231 (14%)
Query: 108 IGSNGFDEDEVLGSGGFGKVYRAVL--PSDGTV-VAVKCLA----EKGERFEKTFAAELV 160
IG E LG G FG V R PS TV VAVKCL + E + F E+
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD-FIREVN 67
Query: 161 AVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSL-DRVLFRRPENLEAAAPLNWEQRKK 219
A+ L HRNL+RL G V + +V + P SL DR+ R+ + L+ +
Sbjct: 68 AMHSLDHRNLIRLYG-VVLTPPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLS-----R 119
Query: 220 IIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTS 279
+A + YL + + IHRD+ N++L ++ ++GDFGL MR
Sbjct: 120 YAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGL-----------MRAL 165
Query: 280 SARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ + + E ++ + PES + + + A SD + FG+ + E+ +
Sbjct: 166 PQNDDHYVMQEHRKV--PFAWCAPESLKTRTFSHA-SDTWMFGVTLWEMFT 213
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 74/176 (42%), Gaps = 23/176 (13%)
Query: 551 PALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGH 610
P F E+ + L HRNL++L G +V +L L H GH
Sbjct: 56 PEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQ----GH 111
Query: 611 SILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLT 670
+L RY + +A + YL +++ IHR++ + + L ++G F L L
Sbjct: 112 FLLGTLSRYAV--QVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 166
Query: 671 RND-----HGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
+ND HRK F + +PE +++ + +D + FGV + E+ T
Sbjct: 167 QNDDHYVMQEHRKVP---------FAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 88/182 (48%), Gaps = 28/182 (15%)
Query: 94 GGDNPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEK 153
G D P+ SY + +V+G+G FG VY+A L G +VA+K + + G+ F+
Sbjct: 13 GPDRPQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-GKAFKN 61
Query: 154 TFAAELVAVAHLRHRNLVRLR------GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLE 207
EL + L H N+VRLR G E L LV DY+P ++ RV R +
Sbjct: 62 R---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPA-TVYRVA-RHYSRAK 116
Query: 208 AAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNA-RLGDFGLAR 266
P+ + K + L +L Y+H I HRD+K N++LD +L DFG A+
Sbjct: 117 QTLPVIYV--KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
Query: 267 WL 268
L
Sbjct: 172 QL 173
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
Query: 514 NFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNL 572
++++++ + FG YQ L D+ + V +K++ K A + R ELQ + +L H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGK--AFKNR---ELQIMRKLDHCNI 75
Query: 573 VQLCGWCTEQGE------MLVIYDY---SATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
V+L + GE + ++ DY + R+ H + + I + Y + +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARH--YSRAKQTLPVIYVKLYMYQLFR 133
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNP-RLGSFALAEFLTRNDHGHRKATSG 682
SLA Y+H + + HR+I + LDPD +L F A+ L R G
Sbjct: 134 SLA----YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR----------G 176
Query: 683 NRSVRGIFG--YMSPEYI-ESGEATSMADVYSFGVVVLEVVTGQ 723
+V I Y +PE I + + TS DV+S G V+ E++ GQ
Sbjct: 177 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 104/239 (43%), Gaps = 31/239 (12%)
Query: 108 IGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVA 163
+G + F+ VLG G FGKV A + G + AVK L + + + E T + +
Sbjct: 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSL 79
Query: 164 HLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRG 223
H L +L D+L V +++ L +F +++ + + + +
Sbjct: 80 ARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL---MF----HIQKSRRFDEARARFYAAE 132
Query: 224 LAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARN 283
+ +AL +LH++ II+RD+K NV+LD + + +L DFG+ +
Sbjct: 133 IISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGM----------------CKE 173
Query: 284 HQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDD 342
+ T GT Y+ PE Q+ A D ++ G+++ E++ G + DD
Sbjct: 174 GICNGVTTATFCGTPDYIAPEILQEMLYGPA-VDWWAMGVLLYEMLCGHAPFEAENEDD 231
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 105/231 (45%), Gaps = 34/231 (14%)
Query: 108 IGSNGFDEDEVLGSGGFGKVYRAVL--PSDGTV-VAVKCLA----EKGERFEKTFAAELV 160
IG E LG G FG V R PS TV VAVKCL + E + F E+
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD-FIREVN 73
Query: 161 AVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSL-DRVLFRRPENLEAAAPLNWEQRKK 219
A+ L HRNL+RL G V + +V + P SL DR+ R+ + L+ +
Sbjct: 74 AMHSLDHRNLIRLYG-VVLTPPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLS-----R 125
Query: 220 IIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTS 279
+A + YL + + IHRD+ N++L ++ ++GDFGL MR
Sbjct: 126 YAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGL-----------MRAL 171
Query: 280 SARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ + + E ++ + PES + + + A SD + FG+ + E+ +
Sbjct: 172 PQNDDHYVMQEHRKV--PFAWCAPESLKTRTFSHA-SDTWMFGVTLWEMFT 219
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 74/176 (42%), Gaps = 23/176 (13%)
Query: 551 PALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGH 610
P F E+ + L HRNL++L G +V +L L H GH
Sbjct: 62 PEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQ----GH 117
Query: 611 SILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLT 670
+L RY + +A + YL +++ IHR++ + + L ++G F L L
Sbjct: 118 FLLGTLSRYAV--QVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172
Query: 671 RND-----HGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
+ND HRK F + +PE +++ + +D + FGV + E+ T
Sbjct: 173 QNDDHYVMQEHRKVP---------FAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 32/218 (14%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHRNLVRLR 174
LG GGF K + V A K + + K + EK + E+ L H+++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGFH 83
Query: 175 GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQ 234
G+ D + +V + RSL + RR E A + +R + YLH
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEA-------RYYLRQIVLGCQYLHRN 136
Query: 235 LETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRI 294
++IHRD+K N+ L+ ++GDFGLA +E++ + + +
Sbjct: 137 ---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK----------------KTL 177
Query: 295 GGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
GT Y+ PE K + + DV+S G ++ ++ G+
Sbjct: 178 CGTPNYIAPEVLSKKG-HSFEVDVWSIGCIMYTLLVGK 214
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 551 PALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGH 610
P R + S E+ L H+++V G+ + + V+ + R L L H+
Sbjct: 58 PHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-----HKRRK 112
Query: 611 SILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLT 670
++ + RY ++ + YLH +VIHR++ + L+ D+ ++G F LA +
Sbjct: 113 ALTEPEARY-YLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 168
Query: 671 RNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
+ G RK T + G Y++PE + + DV+S G ++ ++ G+
Sbjct: 169 YD--GERKKT-----LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 105/231 (45%), Gaps = 34/231 (14%)
Query: 108 IGSNGFDEDEVLGSGGFGKVYRAVL--PSDGTV-VAVKCLA----EKGERFEKTFAAELV 160
IG E LG G FG V R PS TV VAVKCL + E + F E+
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD-FIREVN 63
Query: 161 AVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSL-DRVLFRRPENLEAAAPLNWEQRKK 219
A+ L HRNL+RL G V + +V + P SL DR+ R+ + L+ +
Sbjct: 64 AMHSLDHRNLIRLYG-VVLTPPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLS-----R 115
Query: 220 IIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTS 279
+A + YL + + IHRD+ N++L ++ ++GDFGL MR
Sbjct: 116 YAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGL-----------MRAL 161
Query: 280 SARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ + + E ++ + PES + + + A SD + FG+ + E+ +
Sbjct: 162 PQNDDHYVMQEHRKV--PFAWCAPESLKTRTFSHA-SDTWMFGVTLWEMFT 209
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 74/176 (42%), Gaps = 23/176 (13%)
Query: 551 PALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGH 610
P F E+ + L HRNL++L G +V +L L H GH
Sbjct: 52 PEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQ----GH 107
Query: 611 SILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLT 670
+L RY + +A + YL +++ IHR++ + + L ++G F L L
Sbjct: 108 FLLGTLSRYAV--QVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 162
Query: 671 RND-----HGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
+ND HRK F + +PE +++ + +D + FGV + E+ T
Sbjct: 163 QNDDHYVMQEHRKVP---------FAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 32/218 (14%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHRNLVRLR 174
LG GGF K + V A K + + K + EK + E+ L H+++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGFH 83
Query: 175 GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQ 234
G+ D + +V + RSL + RR E A + +R + YLH
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEA-------RYYLRQIVLGCQYLHRN 136
Query: 235 LETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRI 294
++IHRD+K N+ L+ ++GDFGLA +E++ + + +
Sbjct: 137 ---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK----------------KTL 177
Query: 295 GGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
GT Y+ PE K + + DV+S G ++ ++ G+
Sbjct: 178 CGTPNYIAPEVLSKKG-HSFEVDVWSIGCIMYTLLVGK 214
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 551 PALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGH 610
P R + S E+ L H+++V G+ + + V+ + R L L H+
Sbjct: 58 PHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-----HKRRK 112
Query: 611 SILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLT 670
++ + RY ++ + YLH +VIHR++ + L+ D+ ++G F LA +
Sbjct: 113 ALTEPEARY-YLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 168
Query: 671 RNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
+ G RK T + G Y++PE + + DV+S G ++ ++ G+
Sbjct: 169 YD--GERKKT-----LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 32/218 (14%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHRNLVRLR 174
LG GGF K + V A K + + K + EK + E+ L H+++V
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGFH 87
Query: 175 GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQ 234
G+ D + +V + RSL + RR E A + +R + YLH
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEA-------RYYLRQIVLGCQYLHRN 140
Query: 235 LETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRI 294
++IHRD+K N+ L+ ++GDFGLA +E++ + + +
Sbjct: 141 ---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK----------------KTL 181
Query: 295 GGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
GT Y+ PE K + + DV+S G ++ ++ G+
Sbjct: 182 CGTPNYIAPEVLSKKG-HSFEVDVWSIGCIMYTLLVGK 218
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 551 PALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGH 610
P R + S E+ L H+++V G+ + + V+ + R L L H+
Sbjct: 62 PHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-----HKRRK 116
Query: 611 SILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLT 670
++ + RY ++ + YLH +VIHR++ + L+ D+ ++G F LA +
Sbjct: 117 ALTEPEARY-YLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 172
Query: 671 RNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
+ G RK T + G Y++PE + + DV+S G ++ ++ G+
Sbjct: 173 YD--GERKKT-----LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 218
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 98/238 (41%), Gaps = 28/238 (11%)
Query: 96 DNPRIFSYAELYI--GSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEK 153
D P + +L I S+ ++ + +GSG FG +VAVK + E+GE+ ++
Sbjct: 2 DRPAVSGPMDLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI-ERGEKIDE 60
Query: 154 TFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLN 213
E++ LRH N+VR + + L +V +Y LF R N A +
Sbjct: 61 NVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE----LFERICN---AGRFS 113
Query: 214 WEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQ 273
++ + + L + + Y H Q+ HRD+K N +LD RL L
Sbjct: 114 EDEARFFFQQLISGVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLH 170
Query: 274 YQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
Q +++ GT Y+ PE K +DV+S G+ + ++ G
Sbjct: 171 SQPKSTV---------------GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 120/308 (38%), Gaps = 50/308 (16%)
Query: 535 DNHQYVLVKRLGMSK---CPALRTRFSNEL-------------QNLAR-------LRHRN 571
D+ +Y LVK +G +R + SNEL +N+ R LRH N
Sbjct: 17 DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPN 76
Query: 572 LVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILY 631
+V+ + ++ +Y++ L + N R ++ + L S + Y
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERIC-NAGRFSEDEARF-----FFQQLISGVSY 130
Query: 632 LHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFG 691
H QV HR++ LD PRL A + H K+T G +
Sbjct: 131 CHAM---QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPA------ 181
Query: 692 YMSPEYIESGEAT-SMADVYSFGVVVLEVVTGQMAVDFRLPEGL--LVKRVHEFEARKRP 748
Y++PE + E +ADV+S GV + ++ G A F PE K +H +
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG--AYPFEDPEEPKNFRKTIHRILNVQYA 239
Query: 749 LAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGNDKRFMEDGQMT 808
+ + V +S E H + R+ A +S PE+R + L L + M D MT
Sbjct: 240 IPDYVHIS--PECRHL-ISRIFVADPAKRISIPEIR-NHEWFLKNLPAD---LMNDNTMT 292
Query: 809 ENLEEWKQ 816
+E Q
Sbjct: 293 TQFDESDQ 300
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 32/240 (13%)
Query: 96 DNPRIFSYAELYI--GSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEK 153
D P + +L I S+ ++ + +G+G FG +VAVK + E+GE+ ++
Sbjct: 2 DRPAVAGPMDLPIMHDSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYI-ERGEKIDE 60
Query: 154 TFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLN 213
E++ LRH N+VR + + L +V +Y LF R N A +
Sbjct: 61 NVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE----LFERICN---AGRFS 113
Query: 214 WEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARL--GDFGLARWLEHE 271
++ + + L + + Y H Q+ HRD+K N +LD RL DFG ++
Sbjct: 114 EDEARFFFQQLISGVSYAHAM---QVAHRDLKLENTLLDGSPAPRLKIADFGYSK--ASV 168
Query: 272 LQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
L Q +++ GT Y+ PE K +DV+S G+ + ++ G
Sbjct: 169 LHSQPKSAV---------------GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 35/218 (16%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHRNLVRL 173
LG+G FG+V+ +G A+K L + + ++ E T E + ++ + H ++R+
Sbjct: 13 TLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHT-NDERLMLSIVTHPFIIRM 71
Query: 174 RGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHE 233
G Q+ ++ DY+ L +L + A K + AL YLH
Sbjct: 72 WGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVA-------KFYAAEVCLALEYLHS 124
Query: 234 QLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTR 293
+ II+RD+K N++LD + ++ DFG A+++ T
Sbjct: 125 K---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-------------------VTYX 162
Query: 294 IGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
+ GT Y+ PE + D +SFGI++ E+++G
Sbjct: 163 LCGTPDYIAPEVVSTKPYNKS-IDWWSFGILIYEMLAG 199
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/159 (19%), Positives = 74/159 (46%), Gaps = 19/159 (11%)
Query: 564 LARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIK 623
L+ + H ++++ G + ++ +I DY L LL + R + + +++
Sbjct: 60 LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLL-RKSQRFPNPVAKFY-----AA 113
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
+ A+ YLH ++ +I+R++ I LD + + ++ F A+++ +
Sbjct: 114 EVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTY--------- 161
Query: 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
+ G Y++PE + + D +SFG+++ E++ G
Sbjct: 162 -XLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 34/219 (15%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A+ G VA+K L+ + E F K EL+ + H++H N++ L
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 177 CVHEDQLLLVYDY---MPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHE 233
L YD+ MP D ++ +E + E+ + ++ + L Y+H
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTD---LQKIMGME----FSEEKIQYLVYQMLKGLKYIHS 162
Query: 234 QLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTR 293
++HRD+K N+ ++ ++ DFGLAR + AE T
Sbjct: 163 ---AGVVHRDLKPGNLAVNEDCELKILDFGLARHAD-------------------AEMTG 200
Query: 294 IGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
T Y PE D++S G ++ E+++G+
Sbjct: 201 YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 71/169 (42%), Gaps = 17/169 (10%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQW 615
R EL L ++H N++ L T + YD+ ++ + +G +
Sbjct: 87 RAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYL--VMPFMQTDLQKIMGMEFSEE 144
Query: 616 HHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHG 675
+Y ++ + + Y+H + V+HR++ + ++ D ++ F LA H
Sbjct: 145 KIQY-LVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR------HA 194
Query: 676 HRKATSGNRSVRGIFGYMSPEYIESG-EATSMADVYSFGVVVLEVVTGQ 723
+ T G R Y +PE I S D++S G ++ E++TG+
Sbjct: 195 DAEMT-GYVVTRW---YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 92/221 (41%), Gaps = 38/221 (17%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A+ G VA+K L+ + E F K EL+ + H++H N++ L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 177 CVHEDQLLLVYDY---MPNRSLDRVLFRRPENLEAAAPLNWEQRK--KIIRGLAAALHYL 231
L YD+ MP D L+ L + + K ++ + L Y+
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTD---------LQKIMGLKFSEEKIQYLVYQMLKGLKYI 142
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
H ++HRD+K N+ ++ ++ DFGLAR + AE
Sbjct: 143 HS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHAD-------------------AEM 180
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
T T Y PE D++S G ++ E+++G+
Sbjct: 181 TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 71/169 (42%), Gaps = 17/169 (10%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQW 615
R EL L ++H N++ L T + YD+ ++ + +G +
Sbjct: 69 RAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYL--VMPFMQTDLQKIMGLKFSEE 126
Query: 616 HHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHG 675
+Y ++ + + Y+H + V+HR++ + ++ D ++ F LA H
Sbjct: 127 KIQY-LVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR------HA 176
Query: 676 HRKATSGNRSVRGIFGYMSPEYIESG-EATSMADVYSFGVVVLEVVTGQ 723
+ T G R Y +PE I S D++S G ++ E++TG+
Sbjct: 177 DAEMT-GYVVTRW---YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 112/246 (45%), Gaps = 45/246 (18%)
Query: 94 GGDNPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEK 153
G D P+ SY + +V+G+G FG VY+A L G +VA+K + + +RF+
Sbjct: 13 GPDRPQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKN 61
Query: 154 TFAAELVAVAHLRHRNLVRLRGWCVHEDQ------LLLVYDYMPNRSLDRVLFRRPENLE 207
EL + L H N+VRLR + + L LV DY+P ++ RV R +
Sbjct: 62 ---RELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPE-TVYRVA-RHYSRAK 116
Query: 208 AAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNA-RLGDFGLAR 266
P+ + K + L +L Y+H I HRD+K N++LD +L DFG A+
Sbjct: 117 QTLPVIYV--KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
Query: 267 WLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVL 326
L ++ + S + + E I G Y T+ DV+S G V+
Sbjct: 172 QL---VRGEPNVSXICSRYYRAPEL--IFGATDY------------TSSIDVWSAGCVLA 214
Query: 327 EVVSGR 332
E++ G+
Sbjct: 215 ELLLGQ 220
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 40/225 (17%)
Query: 514 NFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSN-ELQNLARLRHRN 571
++++++ + FG YQ L D+ + V +K++ K RF N ELQ + +L H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 74
Query: 572 LVQLCGWCTEQGE------MLVIYDY---SATRILSHLLFHNNHRIGHSILQWHHRYNII 622
+V+L + GE + ++ DY + R+ H + + I + Y +
Sbjct: 75 IVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLF 132
Query: 623 KSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNP-RLGSFALAEFLTRNDHGHRKATS 681
+SLA Y+H + + HR+I + LDPD +L F A+ L R
Sbjct: 133 RSLA----YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---------- 175
Query: 682 GNRSVRGIFG--YMSPEYI-ESGEATSMADVYSFGVVVLEVVTGQ 723
G +V I Y +PE I + + TS DV+S G V+ E++ GQ
Sbjct: 176 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 32/218 (14%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHRNLVRLR 174
LG GGF K + V A K + + K + EK + E+ L H+++V
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGFH 81
Query: 175 GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQ 234
G+ D + +V + RSL + RR E A + +R + YLH
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEA-------RYYLRQIVLGCQYLHRN 134
Query: 235 LETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRI 294
++IHRD+K N+ L+ ++GDFGLA +E++ + + +
Sbjct: 135 ---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK----------------KVL 175
Query: 295 GGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
GT Y+ PE K + + DV+S G ++ ++ G+
Sbjct: 176 CGTPNYIAPEVLSKKG-HSFEVDVWSIGCIMYTLLVGK 212
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 551 PALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGH 610
P R + S E+ L H+++V G+ + + V+ + R L L H+
Sbjct: 56 PHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-----HKRRK 110
Query: 611 SILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLT 670
++ + RY ++ + YLH +VIHR++ + L+ D+ ++G F LA +
Sbjct: 111 ALTEPEARY-YLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 166
Query: 671 RNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
+ G RK + + G Y++PE + + DV+S G ++ ++ G+
Sbjct: 167 YD--GERK-----KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 212
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 92/219 (42%), Gaps = 33/219 (15%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V AV G VA+K L + E F K EL + H+RH N++ L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 177 CVHEDQLLLVYDY---MPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHE 233
++ L D+ MP D + E L ++ + ++ + L Y+H
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKL------GEDRIQFLVYQMLKGLRYIHA 146
Query: 234 QLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTR 293
IIHRD+K N+ ++ ++ DFGLAR + E+ + T
Sbjct: 147 ---AGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTR-------------- 189
Query: 294 IGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
Y PE T D++S G ++ E+++G+
Sbjct: 190 -----WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 72/174 (41%), Gaps = 26/174 (14%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRI-----LSHLLFHNNHRIGH 610
R EL+ L +RH N++ L T + D+ L L+ H ++G
Sbjct: 70 RAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH--EKLGE 127
Query: 611 SILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLT 670
+Q+ ++ + + Y+H +IHR++ + ++ D ++ F LA
Sbjct: 128 DRIQF-----LVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLA---- 175
Query: 671 RNDHGHRKATSGNRSVRGIFGYMSPEYIESG-EATSMADVYSFGVVVLEVVTGQ 723
R+A S Y +PE I + T D++S G ++ E++TG+
Sbjct: 176 ------RQADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 96/216 (44%), Gaps = 27/216 (12%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVRLRG 175
E +G G +G VY+A T K EK E T E+ + L+H N+V+L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 176 WCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQL 235
+ +L+LV++++ ++ L ++L LE+ K + L + Y H++
Sbjct: 68 VIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTA------KSFLLQLLNGIAYCHDR- 119
Query: 236 ETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIG 295
+++HRD+K N++++ + ++ DFGLAR R + +
Sbjct: 120 --RVLHRDLKPQNLLINREGELKIADFGLARAF---------GIPVRKYTHEIV------ 162
Query: 296 GTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T+ Y P+ + D++S G + E+V+G
Sbjct: 163 -TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 104/250 (41%), Gaps = 31/250 (12%)
Query: 97 NPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC----LAEKGERFE 152
N R A +G FD V+G G + KV L + A+K L E +
Sbjct: 6 NTRESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDID 65
Query: 153 KTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPL 212
+ V H LV L E +L V +Y+ L +F +++ L
Sbjct: 66 WVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL---MF----HMQRQRKL 118
Query: 213 NWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHEL 272
E + ++ AL+YLHE+ II+RD+K NV+LDS+ + +L D+G+ +
Sbjct: 119 PEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCK------ 169
Query: 273 QYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
+R T+ GT Y+ PE +G D ++ G+++ E+++GR
Sbjct: 170 -EGLRPGDT---------TSXFCGTPNYIAPEIL-RGEDYGFSVDWWALGVLMFEMMAGR 218
Query: 333 RAVDLTYPDD 342
D+ D
Sbjct: 219 SPFDIVGSSD 228
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 59/128 (46%), Gaps = 13/128 (10%)
Query: 600 LLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPR 659
L+FH + + + H R+ ++ A+ YLHE +I+R++ + LD + + +
Sbjct: 108 LMFHMQRQ--RKLPEEHARF-YSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIK 161
Query: 660 LGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEV 719
L + + + G R + + G Y++PE + + D ++ GV++ E+
Sbjct: 162 LTDYGMCK------EGLRPGDTTSXFC-GTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 214
Query: 720 VTGQMAVD 727
+ G+ D
Sbjct: 215 MAGRSPFD 222
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 106/243 (43%), Gaps = 39/243 (16%)
Query: 97 NPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE---KGERFEK 153
P F I S+ + VLG G FG+V G AVK +++ K + ++
Sbjct: 12 TPGXFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE 71
Query: 154 TFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYD-YMPNRSLDRVLFR-RPENLEAAAP 211
+ E+ + L H N+ +L + + LV + Y D ++ R R ++AA
Sbjct: 72 SLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-- 129
Query: 212 LNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQ---YNARLGDFGLARWL 268
+IIR + + + Y H+ +I+HRD+K N++L+S+ N R+ DFGL+
Sbjct: 130 -------RIIRQVLSGITYXHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179
Query: 269 EHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEV 328
E + + + GT Y+ PE K DV+S G+++ +
Sbjct: 180 EASKKXKDKI-----------------GTAYYIAPEVLH--GTYDEKCDVWSTGVILYIL 220
Query: 329 VSG 331
+SG
Sbjct: 221 LSG 223
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 32/218 (14%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHRNLVRLR 174
LG GGF K + V A K + + K + EK + E+ L H+++V
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGFH 105
Query: 175 GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQ 234
G+ D + +V + RSL + RR E A + +R + YLH
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEA-------RYYLRQIVLGCQYLHRN 158
Query: 235 LETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRI 294
++IHRD+K N+ L+ ++GDFGLA +E++ + + +
Sbjct: 159 ---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK----------------KVL 199
Query: 295 GGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
GT Y+ PE K + + DV+S G ++ ++ G+
Sbjct: 200 CGTPNYIAPEVLSKKG-HSFEVDVWSIGCIMYTLLVGK 236
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 551 PALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGH 610
P R + S E+ L H+++V G+ + + V+ + R L L H+
Sbjct: 80 PHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-----HKRRK 134
Query: 611 SILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLT 670
++ + RY ++ + YLH +VIHR++ + L+ D+ ++G F LA +
Sbjct: 135 ALTEPEARY-YLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 190
Query: 671 RNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
+ G RK + + G Y++PE + + DV+S G ++ ++ G+
Sbjct: 191 YD--GERK-----KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 236
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 32/218 (14%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHRNLVRLR 174
LG GGF K + V A K + + K + EK + E+ L H+++V
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGFH 107
Query: 175 GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQ 234
G+ D + +V + RSL + RR E A + +R + YLH
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEA-------RYYLRQIVLGCQYLHRN 160
Query: 235 LETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRI 294
++IHRD+K N+ L+ ++GDFGLA +E++ + + +
Sbjct: 161 ---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK----------------KVL 201
Query: 295 GGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
GT Y+ PE K + + DV+S G ++ ++ G+
Sbjct: 202 CGTPNYIAPEVLSKKG-HSFEVDVWSIGCIMYTLLVGK 238
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 551 PALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGH 610
P R + S E+ L H+++V G+ + + V+ + R L L H+
Sbjct: 82 PHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-----HKRRK 136
Query: 611 SILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLT 670
++ + RY ++ + YLH +VIHR++ + L+ D+ ++G F LA +
Sbjct: 137 ALTEPEARY-YLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 192
Query: 671 RNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
+ G RK + + G Y++PE + + DV+S G ++ ++ G+
Sbjct: 193 YD--GERK-----KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 238
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 119/277 (42%), Gaps = 74/277 (26%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLA----EKG---------ERFEKTFAAELVAVAHL 165
LGSG +G+V + + A+K + +KG E+F + E+ + L
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 166 RHRNLVRLRGWCVHEDQ--LLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRG 223
H N+++L + V ED+ LV ++ L + R + E A I++
Sbjct: 104 DHPNIIKL--FDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA-------NIMKQ 154
Query: 224 LAAALHYLHEQLETQIIHRDVKTSNVMLDSQ---YNARLGDFGLARWLEHELQYQMRTSS 280
+ + + YLH+ I+HRD+K N++L+++ N ++ DFGL+ + + + + R
Sbjct: 155 ILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRL-- 209
Query: 281 ARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
GT Y+ PE +K K DV+S G+++ ++ G YP
Sbjct: 210 ---------------GTAYYIAPEVLKKK--YNEKCDVWSCGVIMYILLCG-------YP 245
Query: 341 -----DDQIILL------------DWIRRLSDEGKVL 360
+DQ I+ DW + +SDE K L
Sbjct: 246 PFGGQNDQDIIKKVEKGKYYFDFNDW-KNISDEAKEL 281
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 76/168 (45%), Gaps = 23/168 (13%)
Query: 559 NELQNLARLRHRNLVQLCGWCTEQGEMLVIYD-YSATRILSHLLFHNNHRIGHSILQWHH 617
NE+ L L H N+++L ++ ++ + Y + ++ N H+
Sbjct: 95 NEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQII--NRHKFDEC-----D 147
Query: 618 RYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPD---MNPRLGSFALAEFLTRNDH 674
NI+K + S I YLH+ ++HR+I I L+ +N ++ F L+ F ++ D+
Sbjct: 148 AANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK-DY 203
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
R G Y++PE ++ + DV+S GV++ ++ G
Sbjct: 204 KLRDRL-------GTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCG 243
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 117/263 (44%), Gaps = 41/263 (15%)
Query: 119 LGSGGFGKVYRA-VLPSDGT----VVAVKCLAEKGERFE-KTFAAELVAVAHL-RHRNLV 171
LG G FG+V A D T VAVK L E E + +EL + H+ H N+V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 172 RLRGWCVHEDQLLLVY----------DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKII 221
L G C L+V Y+ ++ + V ++ PE+L L E
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDF-LTLEHLICYS 154
Query: 222 RGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSA 281
+A + +L + + IHRD+ N++L + ++ DFGLAR + + +R A
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD-XVRKGDA 210
Query: 282 RNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPD 341
R + ++ PE+ V T +SDV+SFG+++ E+ S + YP
Sbjct: 211 RL-------------PLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGAS---PYPG 253
Query: 342 DQIILLDWIRRLSDEGKVLQAGD 364
+I ++ RRL EG ++A D
Sbjct: 254 VKID-EEFCRRLK-EGTRMRAPD 274
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 70/163 (42%), Gaps = 18/163 (11%)
Query: 569 HRNLVQLCGWCTEQG-EMLVIYDYSATRILSHLL---------FHNNHRIGHSILQWHHR 618
H N+V L G CT+ G ++VI ++ LS L + + L H
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 619 YNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRK 678
+A + +L + + IHR++ + I L ++ F LA + ++ RK
Sbjct: 151 ICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 679 ATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
+ R +M+PE I T +DV+SFGV++ E+ +
Sbjct: 208 GDA-----RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 100/235 (42%), Gaps = 31/235 (13%)
Query: 108 IGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC----LAEKGERFEKTFAAELVAVA 163
+G FD V+G G + KV L + A+K L E + + V
Sbjct: 2 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 61
Query: 164 HLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRG 223
H LV L E +L V +Y+ L +F +++ L E +
Sbjct: 62 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL---MF----HMQRQRKLPEEHARFYSAE 114
Query: 224 LAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARN 283
++ AL+YLHE+ II+RD+K NV+LDS+ + +L D+G+ + +R
Sbjct: 115 ISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCK-------EGLRPGDT-- 162
Query: 284 HQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLT 338
T+ GT Y+ PE +G D ++ G+++ E+++GR D+
Sbjct: 163 -------TSXFCGTPNYIAPEIL-RGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 209
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 59/128 (46%), Gaps = 13/128 (10%)
Query: 600 LLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPR 659
L+FH + + + H R+ ++ A+ YLHE +I+R++ + LD + + +
Sbjct: 93 LMFHMQRQ--RKLPEEHARF-YSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIK 146
Query: 660 LGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEV 719
L + + + G R + + G Y++PE + + D ++ GV++ E+
Sbjct: 147 LTDYGMCK------EGLRPGDTTSXFC-GTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 199
Query: 720 VTGQMAVD 727
+ G+ D
Sbjct: 200 MAGRSPFD 207
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 96/216 (44%), Gaps = 27/216 (12%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVRLRG 175
E +G G +G VY+A T K EK E T E+ + L+H N+V+L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 176 WCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQL 235
+ +L+LV++++ ++ L ++L LE+ K + L + Y H++
Sbjct: 68 VIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTA------KSFLLQLLNGIAYCHDR- 119
Query: 236 ETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIG 295
+++HRD+K N++++ + ++ DFGLAR R + +
Sbjct: 120 --RVLHRDLKPQNLLINREGELKIADFGLARAF---------GIPVRKYTHEVV------ 162
Query: 296 GTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T+ Y P+ + D++S G + E+V+G
Sbjct: 163 -TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 100/232 (43%), Gaps = 21/232 (9%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
E++G G FG+VY + + + + ++ K F E++A RH N+V G
Sbjct: 39 ELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQL-KAFKREVMAYRQTRHENVVLFMGA 97
Query: 177 CVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLE 236
C+ L ++ R+L V+ +A L+ + ++I + + + YLH +
Sbjct: 98 CMSPPHLAIITSLCKGRTLYSVV------RDAKIVLDVNKTRQIAQEIVKGMGYLHAK-- 149
Query: 237 TQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQ---FHLAETTR 293
I+H+D+K+ NV D+ + DFGL + LQ R R HLA
Sbjct: 150 -GILHKDLKSKNVFYDNG-KVVITDFGLFS-ISGVLQAGRREDKLRIQNGWLCHLAPE-- 204
Query: 294 IGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII 345
I L P++ + + SDVF+ G + E + R T P + II
Sbjct: 205 ---IIRQLSPDTEEDKLPFSKHSDVFALGTIWYE-LHAREWPFKTQPAEAII 252
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 109/266 (40%), Gaps = 31/266 (11%)
Query: 81 FHDMEGVQMSEKVGGDNPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVA 140
F G + E+ N R A +G FD V+G G + KV L + A
Sbjct: 22 FQGAMGSGIEEEKEAMNTRESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYA 81
Query: 141 VKC----LAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLD 196
++ L E + + V H LV L E +L V +Y+ L
Sbjct: 82 MRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL- 140
Query: 197 RVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYN 256
+F +++ L E + ++ AL+YLHE+ II+RD+K NV+LDS+ +
Sbjct: 141 --MF----HMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGH 191
Query: 257 ARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKS 316
+L D+G+ + +R T+ GT Y+ PE +G
Sbjct: 192 IKLTDYGMCK-------EGLRPGDT---------TSTFCGTPNYIAPEIL-RGEDYGFSV 234
Query: 317 DVFSFGIVVLEVVSGRRAVDLTYPDD 342
D ++ G+++ E+++GR D+ D
Sbjct: 235 DWWALGVLMFEMMAGRSPFDIVGSSD 260
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 59/128 (46%), Gaps = 13/128 (10%)
Query: 600 LLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPR 659
L+FH + + + H R+ ++ A+ YLHE +I+R++ + LD + + +
Sbjct: 140 LMFHMQRQ--RKLPEEHARF-YSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIK 193
Query: 660 LGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEV 719
L + + + G R + + G Y++PE + + D ++ GV++ E+
Sbjct: 194 LTDYGMCK------EGLRPGDT-TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 246
Query: 720 VTGQMAVD 727
+ G+ D
Sbjct: 247 MAGRSPFD 254
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 109/252 (43%), Gaps = 55/252 (21%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRL--- 173
E+ G FG V++A L +D V + L +K + E+ + ++H NL++
Sbjct: 21 EIKARGRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSER---EIFSTPGMKHENLLQFIAA 77
Query: 174 --RGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
RG + E +L L+ + SL L + W + + ++ L YL
Sbjct: 78 EKRGSNL-EVELWLITAFHDKGSLTDYL--------KGNIITWNELCHVAETMSRGLSYL 128
Query: 232 HEQL--------ETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARN 283
HE + + I HRD K+ NV+L S A L DFGLA ++++
Sbjct: 129 HEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLA------VRFEPGKPPGDT 182
Query: 284 HQFHLAETTRIGGTIG---YLPPE------SFQKGSVATAKSDVFSFGIVVLEVVSGRRA 334
H G +G Y+ PE +FQ+ A + D+++ G+V+ E+VS +A
Sbjct: 183 H-----------GQVGTRRYMAPEVLEGAINFQRD--AFLRIDMYAMGLVLWELVSRCKA 229
Query: 335 VDLTYPDDQIIL 346
D P D+ +L
Sbjct: 230 AD--GPVDEYML 239
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 34/228 (14%)
Query: 526 FGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEM 585
FG ++ L N +V VK + + ++ E+ + ++H NL+Q ++G
Sbjct: 28 FGCVWKAQLMN-DFVAVKIFPLQDKQSWQS--EREIFSTPGMKHENLLQFIA-AEKRGSN 83
Query: 586 LVIYDYSATRILSHLLFHNNHRIGH----SILQWHHRYNIIKSLASAILYLHEE--W--- 636
L + + T FH+ + +I+ W+ ++ ++++ + YLHE+ W
Sbjct: 84 LEVELWLITA------FHDKGSLTDYLKGNIITWNELCHVAETMSRGLSYLHEDVPWCRG 137
Query: 637 ---NEQVIHRNITSSAITLDPDMNPRLGSFALA-EFLTRNDHGHRKATSGNRSVRGIFGY 692
+ HR+ S + L D+ L F LA F G G R Y
Sbjct: 138 EGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRR------Y 191
Query: 693 MSPEYIESG-----EATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLL 735
M+PE +E +A D+Y+ G+V+ E+V+ A D + E +L
Sbjct: 192 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYML 239
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 105/227 (46%), Gaps = 19/227 (8%)
Query: 500 PREISFKEIISATNNFS-ESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKC----PALR 554
P EI KE+ + E + + +FGT +G+ + V + + K PAL+
Sbjct: 13 PEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK 72
Query: 555 TRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQ 614
E + +L + +V++ G C + MLV+ + + L+ L N H +I++
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGICEAESWMLVM-EMAELGPLNKYLQQNRHVKDKNIIE 131
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
++ ++ + YL E +HR++ + + L ++ F L++ L +++
Sbjct: 132 ------LVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 182
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
++ T G V+ + +PE I + +S +DV+SFGV++ E +
Sbjct: 183 YYKAQTHGKWPVK----WYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 35/223 (15%)
Query: 115 EDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAH----LRHRNL 170
ED+ LGSG FG V + V V K E + EL+A A+ L + +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 171 VRLRGWCVHEDQLLLV--YDYMP-NRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
VR+ G C E +L++ + P N+ L + + +N+ +++ ++
Sbjct: 91 VRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----------IELVHQVSMG 139
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
+ YL E + +HRD+ NV+L +Q+ A++ DFGL++ L R + +
Sbjct: 140 MKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-------------RADENY 183
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
T + + PE ++KSDV+SFG+++ E S
Sbjct: 184 YKAQTHGKWPVKWYAPECINYYKF-SSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 105/227 (46%), Gaps = 19/227 (8%)
Query: 500 PREISFKEIISATNNFS-ESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKC----PALR 554
P EI KE+ + E + + +FGT +G+ + V + + K PAL+
Sbjct: 13 PEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK 72
Query: 555 TRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQ 614
E + +L + +V++ G C + MLV+ + + L+ L N H +I++
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGICEAESWMLVM-EMAELGPLNKYLQQNRHVKDKNIIE 131
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
++ ++ + YL E +HR++ + + L ++ F L++ L +++
Sbjct: 132 ------LVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 182
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
++ T G V+ + +PE I + +S +DV+SFGV++ E +
Sbjct: 183 YYKAQTHGKWPVK----WYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 35/223 (15%)
Query: 115 EDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAH----LRHRNL 170
ED+ LGSG FG V + V V K E + EL+A A+ L + +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 171 VRLRGWCVHEDQLLLV--YDYMP-NRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
VR+ G C E +L++ + P N+ L + + +N+ +++ ++
Sbjct: 91 VRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----------IELVHQVSMG 139
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
+ YL E + +HRD+ NV+L +Q+ A++ DFGL++ L R + +
Sbjct: 140 MKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-------------RADENY 183
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
T + + PE ++KSDV+SFG+++ E S
Sbjct: 184 YKAQTHGKWPVKWYAPECINYYKF-SSKSDVWSFGVLMWEAFS 225
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 100/235 (42%), Gaps = 31/235 (13%)
Query: 108 IGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC----LAEKGERFEKTFAAELVAVA 163
+G FD V+G G + KV L + A+K L E + + V
Sbjct: 6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 65
Query: 164 HLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRG 223
H LV L E +L V +Y+ L +F +++ L E +
Sbjct: 66 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL---MF----HMQRQRKLPEEHARFYSAE 118
Query: 224 LAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARN 283
++ AL+YLHE+ II+RD+K NV+LDS+ + +L D+G+ + +R
Sbjct: 119 ISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCK-------EGLRPGDT-- 166
Query: 284 HQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLT 338
T+ GT Y+ PE +G D ++ G+++ E+++GR D+
Sbjct: 167 -------TSXFCGTPNYIAPEIL-RGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 213
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 59/128 (46%), Gaps = 13/128 (10%)
Query: 600 LLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPR 659
L+FH + + + H R+ ++ A+ YLHE +I+R++ + LD + + +
Sbjct: 97 LMFHMQRQ--RKLPEEHARF-YSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIK 150
Query: 660 LGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEV 719
L + + + G R + + G Y++PE + + D ++ GV++ E+
Sbjct: 151 LTDYGMCK------EGLRPGDTTSXFC-GTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 203
Query: 720 VTGQMAVD 727
+ G+ D
Sbjct: 204 MAGRSPFD 211
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 96/216 (44%), Gaps = 27/216 (12%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVRLRG 175
E +G G +G VY+A T K EK E T E+ + L+H N+V+L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 176 WCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQL 235
+ +L+LV++++ ++ L ++L LE+ K + L + Y H++
Sbjct: 68 VIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTA------KSFLLQLLNGIAYCHDR- 119
Query: 236 ETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIG 295
+++HRD+K N++++ + ++ DFGLAR R + +
Sbjct: 120 --RVLHRDLKPQNLLINREGELKIADFGLARAF---------GIPVRKYTHEVV------ 162
Query: 296 GTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T+ Y P+ + D++S G + E+V+G
Sbjct: 163 -TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 97/238 (40%), Gaps = 28/238 (11%)
Query: 96 DNPRIFSYAELYI--GSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEK 153
D P + +L I S+ ++ + +GSG FG +VAVK + E+GE+ ++
Sbjct: 2 DRPAVSGPMDLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI-ERGEKIDE 60
Query: 154 TFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLN 213
E++ LRH N+VR + + L +V +Y LF R N A +
Sbjct: 61 NVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE----LFERICN---AGRFS 113
Query: 214 WEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQ 273
++ + + L + + Y H Q+ HRD+K N +LD RL L
Sbjct: 114 EDEARFFFQQLISGVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLH 170
Query: 274 YQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
Q + + GT Y+ PE K +DV+S G+ + ++ G
Sbjct: 171 SQPKDTV---------------GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 105/227 (46%), Gaps = 19/227 (8%)
Query: 500 PREISFKEIISATNNFS-ESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKC----PALR 554
P EI KE+ + E + + +FGT +G+ + V + + K PAL+
Sbjct: 11 PEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK 70
Query: 555 TRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQ 614
E + +L + +V++ G C + MLV+ + + L+ L N H +I++
Sbjct: 71 DELLAEANVMQQLDNPYIVRMIGICEAESWMLVM-EMAELGPLNKYLQQNRHVKDKNIIE 129
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
++ ++ + YL E +HR++ + + L ++ F L++ L +++
Sbjct: 130 ------LVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 180
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
++ T G V+ + +PE I + +S +DV+SFGV++ E +
Sbjct: 181 YYKAQTHGKWPVK----WYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 35/223 (15%)
Query: 115 EDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAH----LRHRNL 170
ED+ LGSG FG V + V V K E + EL+A A+ L + +
Sbjct: 29 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 88
Query: 171 VRLRGWCVHEDQLLLV--YDYMP-NRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
VR+ G C E +L++ + P N+ L + + +N+ +++ ++
Sbjct: 89 VRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----------IELVHQVSMG 137
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
+ YL E + +HRD+ NV+L +Q+ A++ DFGL++ L R + +
Sbjct: 138 MKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-------------RADENY 181
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
T + + PE ++KSDV+SFG+++ E S
Sbjct: 182 YKAQTHGKWPVKWYAPECINYYKF-SSKSDVWSFGVLMWEAFS 223
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 103/238 (43%), Gaps = 43/238 (18%)
Query: 117 EVLGSGGFGKVYRAVL-----PSDGTVVAVKCLAEKGERFE-KTFAAELVAVAHLRHRNL 170
+ LG G FGKV +A + T VAVK L E E + +E + + H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAA----------APLNWEQRKKI 220
++L G C + LLL+ +Y SL R R + + L+ + +
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSL-RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 221 IRG--------LAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHEL 272
G ++ + YL E +++HRD+ N+++ ++ DFGL+R + E
Sbjct: 148 TMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE- 203
Query: 273 QYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
S + Q + + ++ ES + T +SDV+SFG+++ E+V+
Sbjct: 204 -----DSXVKRSQGRIP--------VKWMAIESLFD-HIYTTQSDVWSFGVLLWEIVT 247
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 87/201 (43%), Gaps = 28/201 (13%)
Query: 540 VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSH 599
V VK L + P+ +E L ++ H ++++L G C++ G +L+I +Y+ L
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 600 LLFHNNHRIGHSILQWHHR-------------------YNIIKSLASAILYLHEEWNEQV 640
L + ++G L + ++ + YL E ++
Sbjct: 116 FL-RESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KL 171
Query: 641 IHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIES 700
+HR++ + I + ++ F L+ + D K + G V+ +M+ E +
Sbjct: 172 VHRDLAARNILVAEGRKMKISDFGLSRDVYEED-SXVKRSQGRIPVK----WMAIESLFD 226
Query: 701 GEATSMADVYSFGVVVLEVVT 721
T+ +DV+SFGV++ E+VT
Sbjct: 227 HIYTTQSDVWSFGVLLWEIVT 247
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 92/218 (42%), Gaps = 32/218 (14%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHRNLVRLR 174
LG GGF K Y V A K + + K + EK + E+ L + ++V
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSLDNPHVVGFH 92
Query: 175 GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQ 234
G+ +D + +V + RSL + RR E A + +R + YLH
Sbjct: 93 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEA-------RYFMRQTIQGVQYLHNN 145
Query: 235 LETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRI 294
++IHRD+K N+ L+ + ++GDFGLA +E F +
Sbjct: 146 ---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE----------------FDGERKKDL 186
Query: 295 GGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
GT Y+ PE K + + D++S G ++ ++ G+
Sbjct: 187 CGTPNYIAPEVLCKKG-HSFEVDIWSLGCILYTLLVGK 223
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 94/209 (44%), Gaps = 24/209 (11%)
Query: 515 FSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQ 574
F++ + +MD + G V+ K + + P + + S E+ L + ++V
Sbjct: 39 FAKCYEITDMDTKEVFAG------KVVPKSMLLK--PHQKEKMSTEIAIHKSLDNPHVVG 90
Query: 575 LCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHE 634
G+ + + V+ + R L L H+ ++ + RY ++ + YLH
Sbjct: 91 FHGFFEDDDFVYVVLEICRRRSLLEL-----HKRRKAVTEPEARY-FMRQTIQGVQYLH- 143
Query: 635 EWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMS 694
N +VIHR++ + L+ DM+ ++G F LA + + G RK + + G Y++
Sbjct: 144 --NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD--GERK-----KDLCGTPNYIA 194
Query: 695 PEYIESGEATSMADVYSFGVVVLEVVTGQ 723
PE + + D++S G ++ ++ G+
Sbjct: 195 PEVLCKKGHSFEVDIWSLGCILYTLLVGK 223
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 104/244 (42%), Gaps = 61/244 (25%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGER--FEKTFAAELVAVAHLRHRNLVRLR 174
E +G G +G+V+R G VAVK + + E+ F +T EL LRH N++
Sbjct: 14 ECVGKGRYGEVWRGSW--QGENVAVKIFSSRDEKSWFRET---ELYNTVMLRHENILGFI 68
Query: 175 G------------WCV-HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKII 221
W + H ++ +YDY+ +LD V R I+
Sbjct: 69 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR-----------------IV 111
Query: 222 RGLAAALHYLH-----EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQM 276
+A+ L +LH Q + I HRD+K+ N+++ + D GLA + H
Sbjct: 112 LSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA--VMH------ 163
Query: 277 RTSSARNHQFHLAETTRIGGTIGYLPP----ESFQKGSVATAKS-DVFSFGIVVLEVVSG 331
S +Q + R+ GT Y+ P E+ Q + K D+++FG+V+ EV
Sbjct: 164 ---SQSTNQLDVGNNPRV-GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--A 217
Query: 332 RRAV 335
RR V
Sbjct: 218 RRMV 221
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 108/238 (45%), Gaps = 35/238 (14%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNL 170
+++ E +G G +G V++A +VA+K L + E + E+ + L+H+N+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
VRL + +L LV+++ D+ L + ++ L+ E K + L L +
Sbjct: 64 VRLHDVLHSDKKLTLVFEFC-----DQDLKKYFDSCNGD--LDPEIVKSFLFQLLKGLGF 116
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
H + ++HRD+K N++++ +L +FGLAR +R S AE
Sbjct: 117 CHSR---NVLHRDLKPQNLLINRNGELKLANFGLAR----AFGIPVRCYS--------AE 161
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP----DDQI 344
T+ Y PP+ + + D++S G + E+ + R + +P DDQ+
Sbjct: 162 VV----TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL---FPGNDVDDQL 212
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 104/244 (42%), Gaps = 61/244 (25%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGER--FEKTFAAELVAVAHLRHRNLVRLR 174
E +G G +G+V+R G VAVK + + E+ F +T EL LRH N++
Sbjct: 43 ECVGKGRYGEVWRGSW--QGENVAVKIFSSRDEKSWFRET---ELYNTVMLRHENILGFI 97
Query: 175 G------------WCV-HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKII 221
W + H ++ +YDY+ +LD V R I+
Sbjct: 98 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR-----------------IV 140
Query: 222 RGLAAALHYLH-----EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQM 276
+A+ L +LH Q + I HRD+K+ N+++ + D GLA + H
Sbjct: 141 LSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA--VMH------ 192
Query: 277 RTSSARNHQFHLAETTRIGGTIGYLPP----ESFQKGSVATAKS-DVFSFGIVVLEVVSG 331
S +Q + R+ GT Y+ P E+ Q + K D+++FG+V+ EV
Sbjct: 193 ---SQSTNQLDVGNNPRV-GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--A 246
Query: 332 RRAV 335
RR V
Sbjct: 247 RRMV 250
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 104/244 (42%), Gaps = 61/244 (25%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGER--FEKTFAAELVAVAHLRHRNLVRLR 174
E +G G +G+V+R G VAVK + + E+ F +T EL LRH N++
Sbjct: 14 ECVGKGRYGEVWRGSW--QGENVAVKIFSSRDEKSWFRET---ELYNTVMLRHENILGFI 68
Query: 175 G------------WCV-HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKII 221
W + H ++ +YDY+ +LD V R I+
Sbjct: 69 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR-----------------IV 111
Query: 222 RGLAAALHYLH-----EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQM 276
+A+ L +LH Q + I HRD+K+ N+++ + D GLA + H
Sbjct: 112 LSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA--VMH------ 163
Query: 277 RTSSARNHQFHLAETTRIGGTIGYLPP----ESFQKGSVATAKS-DVFSFGIVVLEVVSG 331
S +Q + R+ GT Y+ P E+ Q + K D+++FG+V+ EV
Sbjct: 164 ---SQSTNQLDVGNNPRV-GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--A 217
Query: 332 RRAV 335
RR V
Sbjct: 218 RRMV 221
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 96/228 (42%), Gaps = 35/228 (15%)
Query: 110 SNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK---GERFEKTFAAELVAVAHLR 166
S+ +D E LG G F V R V + G A K + K F+K E L+
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK-LEREARICRKLQ 86
Query: 167 HRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAA 226
H N+VRL E LV+D + L + R EA A I+ +
Sbjct: 87 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADA-------SHCIQQILE 139
Query: 227 ALHYLHEQLETQIIHRDVKTSNVMLDSQYNA---RLGDFGLARWLEHELQYQMRTSSARN 283
++ Y H I+HR++K N++L S+ +L DFGLA ++ S A
Sbjct: 140 SIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--------IEVNDSEAW- 187
Query: 284 HQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
H F GT GYL PE +K + D+++ G+++ ++ G
Sbjct: 188 HGF--------AGTPGYLSPEVLKKDPYSKP-VDIWACGVILYILLVG 226
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 73/164 (44%), Gaps = 28/164 (17%)
Query: 566 RLRHRNLVQLCGWCTEQGEMLVIYD-YSATRILSHLL---FHNNHRIGHSILQWHHRYNI 621
+L+H N+V+L E+ +++D + + ++ F++ H I Q I
Sbjct: 84 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ------I 137
Query: 622 IKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNP---RLGSFALAEFLTRNDHGHRK 678
++S+A Y H + ++HRN+ + L +L F LA + ++ H
Sbjct: 138 LESIA----YCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF 190
Query: 679 ATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
A G GY+SPE ++ + D+++ GV++ ++ G
Sbjct: 191 A--------GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 98/223 (43%), Gaps = 38/223 (17%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGER--FEKTFAAELVAVAHLRHRNLVRLRGW 176
+G G FG+V++A G VA+K + + E+ F T E+ + L+H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 177 CVHE--------DQLLLVYDYMPNRS---LDRVLFRRPENLEAAAPLNWEQRKKIIRGLA 225
C + + LV+D+ + L VL + + K++++ L
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK----------FTLSEIKRVMQMLL 135
Query: 226 AALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQ 285
L+Y+H +I+HRD+K +NV++ +L DFGLAR S A+N Q
Sbjct: 136 NGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAF----------SLAKNSQ 182
Query: 286 FHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEV 328
+ + T+ Y PPE D++ G ++ E+
Sbjct: 183 PNRYXNRVV--TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 18/155 (11%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
LG G +G+VY+A+ VA+K L + E T E+ + L+HRN++ L+
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 177 CVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLE 236
H +L L+++Y N L + + + P+ ++ K + L +++ H +
Sbjct: 102 IHHNHRLHLIFEYAEN-DLKKYMDKNPD-------VSMRVIKSFLYQLINGVNFCHSR-- 151
Query: 237 TQIIHRDVKTSNVMLDSQYNA-----RLGDFGLAR 266
+ +HRD+K N++L + ++GDFGLAR
Sbjct: 152 -RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 31/225 (13%)
Query: 117 EVLGSGGFGKVYRAVLPS-DGTV--VAVKC--LAEKGERFEKTFAAELVAVAHLRHRNLV 171
++LG G FG V L DGT VAVK L +R + F +E + H N++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 172 RLRGWCVHED-----QLLLVYDYMPNRSL-DRVLFRRPENLEAAAPLNWEQRKKIIRGLA 225
RL G C+ + +++ +M L +L+ R E PL + K + +A
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPL--QTLLKFMVDIA 157
Query: 226 AALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQ 285
+ YL + +HRD+ N ML + DFGL++ + S Q
Sbjct: 158 LGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKI---------YSGDYYRQ 205
Query: 286 FHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+A+ + ++ ES V T+KSDV++FG+ + E+ +
Sbjct: 206 GRIAKM-----PVKWIAIESLAD-RVYTSKSDVWAFGVTMWEIAT 244
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 95/231 (41%), Gaps = 18/231 (7%)
Query: 505 FKEIISATNNFSESQRVAEMDFGTAYQGFLDNHQ----YVLVKRLGMSKCPALRTR-FSN 559
++++ N + + E +FG+ +G L V VK + + F +
Sbjct: 26 LEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLS 85
Query: 560 ELQNLARLRHRNLVQLCGWCTE---QG--EMLVIYDYSATRILSHLLFHNNHRIGHSILQ 614
E + H N+++L G C E QG + +VI + L L ++ G +
Sbjct: 86 EAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIP 145
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
+ +A + YL N +HR++ + L DM + F L++ + D+
Sbjct: 146 LQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDY 202
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMA 725
+R+ V+ +++ E + TS +DV++FGV + E+ T M
Sbjct: 203 -YRQGRIAKMPVK----WIAIESLADRVYTSKSDVWAFGVTMWEIATRGMT 248
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 96/228 (42%), Gaps = 35/228 (15%)
Query: 110 SNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK---GERFEKTFAAELVAVAHLR 166
S+ +D E LG G F V R V + G A K + K F+K E L+
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK-LEREARICRKLQ 63
Query: 167 HRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAA 226
H N+VRL E LV+D + L + R EA A I+ +
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADA-------SHCIQQILE 116
Query: 227 ALHYLHEQLETQIIHRDVKTSNVMLDSQYNA---RLGDFGLARWLEHELQYQMRTSSARN 283
++ Y H I+HR++K N++L S+ +L DFGLA ++ S A
Sbjct: 117 SIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--------IEVNDSEAW- 164
Query: 284 HQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
H F GT GYL PE +K + D+++ G+++ ++ G
Sbjct: 165 HGF--------AGTPGYLSPEVLKKDPYSKP-VDIWACGVILYILLVG 203
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 76/174 (43%), Gaps = 28/174 (16%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYD-YSATRILSHLL---FHNNHRIGHS 611
+ E + +L+H N+V+L E+ +++D + + ++ F++ H
Sbjct: 51 KLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHC 110
Query: 612 ILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNP---RLGSFALAEF 668
I Q I++S+A Y H + ++HRN+ + L +L F LA
Sbjct: 111 IQQ------ILESIA----YCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 157
Query: 669 LTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
+ ++ H A G GY+SPE ++ + D+++ GV++ ++ G
Sbjct: 158 VNDSEAWHGFA--------GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 96/228 (42%), Gaps = 35/228 (15%)
Query: 110 SNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK---GERFEKTFAAELVAVAHLR 166
S+ +D E LG G F V R V + G A K + K F+K E L+
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK-LEREARICRKLQ 62
Query: 167 HRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAA 226
H N+VRL E LV+D + L + R EA A I+ +
Sbjct: 63 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADA-------SHCIQQILE 115
Query: 227 ALHYLHEQLETQIIHRDVKTSNVMLDSQYNA---RLGDFGLARWLEHELQYQMRTSSARN 283
++ Y H I+HR++K N++L S+ +L DFGLA ++ S A
Sbjct: 116 SIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--------IEVNDSEAW- 163
Query: 284 HQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
H F GT GYL PE +K + D+++ G+++ ++ G
Sbjct: 164 HGF--------AGTPGYLSPEVLKKDPY-SKPVDIWACGVILYILLVG 202
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 76/174 (43%), Gaps = 28/174 (16%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYD-YSATRILSHLL---FHNNHRIGHS 611
+ E + +L+H N+V+L E+ +++D + + ++ F++ H
Sbjct: 50 KLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHC 109
Query: 612 ILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNP---RLGSFALAEF 668
I Q I++S+A Y H + ++HRN+ + L +L F LA
Sbjct: 110 IQQ------ILESIA----YCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 156
Query: 669 LTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
+ ++ H A G GY+SPE ++ + D+++ GV++ ++ G
Sbjct: 157 VNDSEAWHGFA--------GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 92/218 (42%), Gaps = 32/218 (14%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHRNLVRLR 174
LG GGF K Y V A K + + K + EK + E+ L + ++V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSLDNPHVVGFH 108
Query: 175 GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQ 234
G+ +D + +V + RSL + RR E A + +R + YLH
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEA-------RYFMRQTIQGVQYLHNN 161
Query: 235 LETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRI 294
++IHRD+K N+ L+ + ++GDFGLA +E F +
Sbjct: 162 ---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE----------------FDGERKKXL 202
Query: 295 GGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
GT Y+ PE K + + D++S G ++ ++ G+
Sbjct: 203 CGTPNYIAPEVLCKKG-HSFEVDIWSLGCILYTLLVGK 239
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 94/209 (44%), Gaps = 24/209 (11%)
Query: 515 FSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQ 574
F++ + +MD + G V+ K + + P + + S E+ L + ++V
Sbjct: 55 FAKCYEITDMDTKEVFAG------KVVPKSMLLK--PHQKEKMSTEIAIHKSLDNPHVVG 106
Query: 575 LCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHE 634
G+ + + V+ + R L L H+ ++ + RY ++ + YLH
Sbjct: 107 FHGFFEDDDFVYVVLEICRRRSLLEL-----HKRRKAVTEPEARY-FMRQTIQGVQYLH- 159
Query: 635 EWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMS 694
N +VIHR++ + L+ DM+ ++G F LA + + G RK + + G Y++
Sbjct: 160 --NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD--GERK-----KXLCGTPNYIA 210
Query: 695 PEYIESGEATSMADVYSFGVVVLEVVTGQ 723
PE + + D++S G ++ ++ G+
Sbjct: 211 PEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 96/228 (42%), Gaps = 35/228 (15%)
Query: 110 SNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK---GERFEKTFAAELVAVAHLR 166
S+ +D E LG G F V R V + G A K + K F+K E L+
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK-LEREARICRKLQ 63
Query: 167 HRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAA 226
H N+VRL E LV+D + L + R EA A I+ +
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADA-------SHCIQQILE 116
Query: 227 ALHYLHEQLETQIIHRDVKTSNVMLDSQYNA---RLGDFGLARWLEHELQYQMRTSSARN 283
++ Y H I+HR++K N++L S+ +L DFGLA ++ S A
Sbjct: 117 SIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--------IEVNDSEAW- 164
Query: 284 HQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
H F GT GYL PE +K + D+++ G+++ ++ G
Sbjct: 165 HGF--------AGTPGYLSPEVLKKDPYSKP-VDIWACGVILYILLVG 203
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 76/174 (43%), Gaps = 28/174 (16%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYD-YSATRILSHLL---FHNNHRIGHS 611
+ E + +L+H N+V+L E+ +++D + + ++ F++ H
Sbjct: 51 KLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHC 110
Query: 612 ILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNP---RLGSFALAEF 668
I Q I++S+A Y H + ++HRN+ + L +L F LA
Sbjct: 111 IQQ------ILESIA----YCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 157
Query: 669 LTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
+ ++ H A G GY+SPE ++ + D+++ GV++ ++ G
Sbjct: 158 VNDSEAWHGFA--------GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 104/231 (45%), Gaps = 34/231 (14%)
Query: 108 IGSNGFDEDEVLGSGGFGKVYRAVL--PSDGTV-VAVKCLA----EKGERFEKTFAAELV 160
IG E LG G FG V R PS TV VAVKCL + E + F E+
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD-FIREVN 63
Query: 161 AVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSL-DRVLFRRPENLEAAAPLNWEQRKK 219
A+ L HRNL+RL G V + +V + P SL DR+ R+ + L+ +
Sbjct: 64 AMHSLDHRNLIRLYG-VVLTPPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLS-----R 115
Query: 220 IIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTS 279
+A + YL + + IHRD+ N++L ++ ++GDFGL MR
Sbjct: 116 YAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGL-----------MRAL 161
Query: 280 SARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ + E ++ + PES + + + A SD + FG+ + E+ +
Sbjct: 162 PQNDDHXVMQEHRKV--PFAWCAPESLKTRTFSHA-SDTWMFGVTLWEMFT 209
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 74/176 (42%), Gaps = 23/176 (13%)
Query: 551 PALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGH 610
P F E+ + L HRNL++L G +V +L L H GH
Sbjct: 52 PEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQ----GH 107
Query: 611 SILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLT 670
+L RY + +A + YL +++ IHR++ + + L ++G F L L
Sbjct: 108 FLLGTLSRYAV--QVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 162
Query: 671 RND-----HGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
+ND HRK F + +PE +++ + +D + FGV + E+ T
Sbjct: 163 QNDDHXVMQEHRKVP---------FAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 98/223 (43%), Gaps = 38/223 (17%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGER--FEKTFAAELVAVAHLRHRNLVRLRGW 176
+G G FG+V++A G VA+K + + E+ F T E+ + L+H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 177 CVHE--------DQLLLVYDYMPNRS---LDRVLFRRPENLEAAAPLNWEQRKKIIRGLA 225
C + + LV+D+ + L VL + + K++++ L
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK----------FTLSEIKRVMQMLL 135
Query: 226 AALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQ 285
L+Y+H +I+HRD+K +NV++ +L DFGLAR S A+N Q
Sbjct: 136 NGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAF----------SLAKNSQ 182
Query: 286 FHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEV 328
+ + T+ Y PPE D++ G ++ E+
Sbjct: 183 PNRYXNRVV--TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 107/232 (46%), Gaps = 36/232 (15%)
Query: 117 EVLGSGGFGKVYRA----VLPSDGTV-VAVKCLAEKGERFEK-TFAAELVAVAHL-RHRN 169
+ LG+G FGKV A ++ SD + VAVK L E+ +EL +++L H N
Sbjct: 52 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 111
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENL--EAAAP---------LNWEQRK 218
+V L G C L++ +Y L L R+ ++ +P L+ E
Sbjct: 112 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 171
Query: 219 KIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRT 278
+A + +L + IHRD+ N++L ++ DFGLAR ++++ Y ++
Sbjct: 172 SFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKG 228
Query: 279 SSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
++ R+ + ++ PES V T +SDV+S+GI + E+ S
Sbjct: 229 NA------------RL--PVKWMAPESIF-NCVYTFESDVWSYGIFLWELFS 265
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 114/284 (40%), Gaps = 54/284 (19%)
Query: 535 DNHQYVLVKRLGMSKCPALRTRFSNELQNLARL-RHRNLVQLCGWCTEQGEMLVIYDYSA 593
D V VK L S R +EL+ L+ L H N+V L G CT G LVI +Y
Sbjct: 74 DAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCC 133
Query: 594 TRILSHLLFHNN-----HRIGHSIL-----------QWHHRYNIIKSLASAILYLHEEWN 637
L + L + +I+ Y + K +A +
Sbjct: 134 YGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA-------S 186
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
+ IHR++ + I L ++ F LA + +ND + GN R +M+PE
Sbjct: 187 KNCIHRDLAARNILLTHGRITKICDFGLARHI-KNDSNY--VVKGN--ARLPVKWMAPES 241
Query: 698 IESGEATSMADVYSFGVVVLEVVT------GQMAVDFRLPEGLLVKRVHEFEARKRPLAE 751
I + T +DV+S+G+ + E+ + M VD + + ++K + + AE
Sbjct: 242 IFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYK--MIKEGFRMLSPEHAPAE 299
Query: 752 LVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
+ D +M+ C ++P RP+ +QI+ +++
Sbjct: 300 MYD-----------IMK------TCWDADPLKRPTFKQIVQLIE 326
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 104/231 (45%), Gaps = 34/231 (14%)
Query: 108 IGSNGFDEDEVLGSGGFGKVYRAVL--PSDGTV-VAVKCLA----EKGERFEKTFAAELV 160
IG E LG G FG V R PS TV VAVKCL + E + F E+
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD-FIREVN 73
Query: 161 AVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSL-DRVLFRRPENLEAAAPLNWEQRKK 219
A+ L HRNL+RL G V + +V + P SL DR+ R+ + L+ +
Sbjct: 74 AMHSLDHRNLIRLYG-VVLTPPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLS-----R 125
Query: 220 IIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTS 279
+A + YL + + IHRD+ N++L ++ ++GDFGL MR
Sbjct: 126 YAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGL-----------MRAL 171
Query: 280 SARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ + E ++ + PES + + + A SD + FG+ + E+ +
Sbjct: 172 PQNDDHXVMQEHRKV--PFAWCAPESLKTRTFSHA-SDTWMFGVTLWEMFT 219
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 74/176 (42%), Gaps = 23/176 (13%)
Query: 551 PALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGH 610
P F E+ + L HRNL++L G +V +L L H GH
Sbjct: 62 PEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQ----GH 117
Query: 611 SILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLT 670
+L RY + +A + YL +++ IHR++ + + L ++G F L L
Sbjct: 118 FLLGTLSRYAV--QVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172
Query: 671 RND-----HGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
+ND HRK F + +PE +++ + +D + FGV + E+ T
Sbjct: 173 QNDDHXVMQEHRKVP---------FAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 92/218 (42%), Gaps = 32/218 (14%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHRNLVRLR 174
LG GGF K Y V A K + + K + EK + E+ L + ++V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSLDNPHVVGFH 108
Query: 175 GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQ 234
G+ +D + +V + RSL + RR E A + +R + YLH
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEA-------RYFMRQTIQGVQYLHNN 161
Query: 235 LETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRI 294
++IHRD+K N+ L+ + ++GDFGLA +E F +
Sbjct: 162 ---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE----------------FDGERKKTL 202
Query: 295 GGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
GT Y+ PE K + + D++S G ++ ++ G+
Sbjct: 203 CGTPNYIAPEVLCKKG-HSFEVDIWSLGCILYTLLVGK 239
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 94/209 (44%), Gaps = 24/209 (11%)
Query: 515 FSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQ 574
F++ + +MD + G V+ K + + P + + S E+ L + ++V
Sbjct: 55 FAKCYEITDMDTKEVFAG------KVVPKSMLLK--PHQKEKMSTEIAIHKSLDNPHVVG 106
Query: 575 LCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHE 634
G+ + + V+ + R L L H+ ++ + RY ++ + YLH
Sbjct: 107 FHGFFEDDDFVYVVLEICRRRSLLEL-----HKRRKAVTEPEARY-FMRQTIQGVQYLH- 159
Query: 635 EWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMS 694
N +VIHR++ + L+ DM+ ++G F LA + + G RK T + G Y++
Sbjct: 160 --NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD--GERKKT-----LCGTPNYIA 210
Query: 695 PEYIESGEATSMADVYSFGVVVLEVVTGQ 723
PE + + D++S G ++ ++ G+
Sbjct: 211 PEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 35/223 (15%)
Query: 115 EDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAH----LRHRNL 170
ED+ LGSG FG V + V V K E + EL+A A+ L + +
Sbjct: 9 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 68
Query: 171 VRLRGWCVHEDQLLLV--YDYMP-NRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
VR+ G C E +L++ + P N+ L + + +N+ +++ ++
Sbjct: 69 VRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----------IELVHQVSMG 117
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
+ YL E + +HRD+ NV+L +Q+ A++ DFGL++ L + Y + +
Sbjct: 118 MKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK----- 169
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ + PE ++KSDV+SFG+++ E S
Sbjct: 170 --------WPVKWYAPECINYYKF-SSKSDVWSFGVLMWEAFS 203
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 98/209 (46%), Gaps = 18/209 (8%)
Query: 517 ESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKC----PALRTRFSNELQNLARLRHRNL 572
E + + +FGT +G+ + V + + K PAL+ E + +L + +
Sbjct: 9 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 68
Query: 573 VQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYL 632
V++ G C + MLV+ + + L+ L N H +I++ ++ ++ + YL
Sbjct: 69 VRMIGICEAESWMLVM-EMAELGPLNKYLQQNRHVKDKNIIE------LVHQVSMGMKYL 121
Query: 633 HEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGY 692
E +HR++ + + L ++ F L++ L +++ ++ T G V+ +
Sbjct: 122 EES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK----W 174
Query: 693 MSPEYIESGEATSMADVYSFGVVVLEVVT 721
+PE I + +S +DV+SFGV++ E +
Sbjct: 175 YAPECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 30/236 (12%)
Query: 106 LYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAA-----ELV 160
+Y S+ F +LG G +G V A G +VA+K K E F+K A E+
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIK----KIEPFDKPLFALRTLREIK 61
Query: 161 AVAHLRHRNLVRL----RGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQ 216
+ H +H N++ + R + + + L RV+ + L+ +
Sbjct: 62 ILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI--------STQMLSDDH 113
Query: 217 RKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQM 276
+ I A+ LH + +IHRD+K SN++++S + ++ DFGLAR ++ +
Sbjct: 114 IQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIID---ESAA 167
Query: 277 RTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
S Q + E T Y PE + + DV+S G ++ E+ R
Sbjct: 168 DNSEPTGQQSGMTEXV---ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 102/220 (46%), Gaps = 31/220 (14%)
Query: 116 DEVLGSGGFGKVYRAV--LPSDGTVVAVKCLAEKGERFEKTFAAELVAVAH-LRHRNLVR 172
D LG G FG V + V + VA+K L + E+ + + H L + +VR
Sbjct: 15 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 74
Query: 173 LRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
L G C E L+LV + L + L + E + + +++ ++ + YL
Sbjct: 75 LIGVCQAE-ALMLVMEMAGGGPLHKFLVGKREEIPVS------NVAELLHQVSMGMKYLE 127
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETT 292
E+ +HRD+ NV+L +++ A++ DFGL++ L + Y S+ +
Sbjct: 128 EK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGK---------- 174
Query: 293 RIGGTIGYLPPE--SFQKGSVATAKSDVFSFGIVVLEVVS 330
+ + PE +F+K S ++SDV+S+G+ + E +S
Sbjct: 175 ---WPLKWYAPECINFRKFS---SRSDVWSYGVTMWEALS 208
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 88/200 (44%), Gaps = 16/200 (8%)
Query: 525 DFGTAYQGFLDNHQY---VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTE 581
+FG+ QG + V +K L A E Q + +L + +V+L G C
Sbjct: 22 NFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA 81
Query: 582 QGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVI 641
+ MLV+ + + L L I S + ++ ++ + YL E+ +
Sbjct: 82 EALMLVM-EMAGGGPLHKFLVGKREEIPVSNVA-----ELLHQVSMGMKYLEEK---NFV 132
Query: 642 HRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESG 701
HR++ + + L ++ F L++ L +D + ++G ++ + +PE I
Sbjct: 133 HRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLK----WYAPECINFR 188
Query: 702 EATSMADVYSFGVVVLEVVT 721
+ +S +DV+S+GV + E ++
Sbjct: 189 KFSSRSDVWSYGVTMWEALS 208
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 35/223 (15%)
Query: 115 EDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAH----LRHRNL 170
ED+ LGSG FG V + V V K E + EL+A A+ L + +
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70
Query: 171 VRLRGWCVHEDQLLLV--YDYMP-NRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
VR+ G C E +L++ + P N+ L + + +N+ +++ ++
Sbjct: 71 VRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----------IELVHQVSMG 119
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
+ YL E + +HRD+ NV+L +Q+ A++ DFGL++ L + Y + +
Sbjct: 120 MKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK----- 171
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ + PE ++KSDV+SFG+++ E S
Sbjct: 172 --------WPVKWYAPECINYYKF-SSKSDVWSFGVLMWEAFS 205
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 98/209 (46%), Gaps = 18/209 (8%)
Query: 517 ESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKC----PALRTRFSNELQNLARLRHRNL 572
E + + +FGT +G+ + V + + K PAL+ E + +L + +
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70
Query: 573 VQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYL 632
V++ G C + MLV+ + + L+ L N H +I++ ++ ++ + YL
Sbjct: 71 VRMIGICEAESWMLVM-EMAELGPLNKYLQQNRHVKDKNIIE------LVHQVSMGMKYL 123
Query: 633 HEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGY 692
E +HR++ + + L ++ F L++ L +++ ++ T G V+ +
Sbjct: 124 EES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK----W 176
Query: 693 MSPEYIESGEATSMADVYSFGVVVLEVVT 721
+PE I + +S +DV+SFGV++ E +
Sbjct: 177 YAPECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 92/218 (42%), Gaps = 32/218 (14%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHRNLVRLR 174
LG GGF K Y V A K + + K + EK + E+ L + ++V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSLDNPHVVGFH 108
Query: 175 GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQ 234
G+ +D + +V + RSL + RR E A + +R + YLH
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEA-------RYFMRQTIQGVQYLHNN 161
Query: 235 LETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRI 294
++IHRD+K N+ L+ + ++GDFGLA +E F +
Sbjct: 162 ---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE----------------FDGERKKDL 202
Query: 295 GGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
GT Y+ PE K + + D++S G ++ ++ G+
Sbjct: 203 CGTPNYIAPEVLCKKG-HSFEVDIWSLGCILYTLLVGK 239
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 94/209 (44%), Gaps = 24/209 (11%)
Query: 515 FSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQ 574
F++ + +MD + G V+ K + + P + + S E+ L + ++V
Sbjct: 55 FAKCYEITDMDTKEVFAG------KVVPKSMLLK--PHQKEKMSTEIAIHKSLDNPHVVG 106
Query: 575 LCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHE 634
G+ + + V+ + R L L H+ ++ + RY ++ + YLH
Sbjct: 107 FHGFFEDDDFVYVVLEICRRRSLLEL-----HKRRKAVTEPEARY-FMRQTIQGVQYLH- 159
Query: 635 EWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMS 694
N +VIHR++ + L+ DM+ ++G F LA + + G RK + + G Y++
Sbjct: 160 --NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD--GERK-----KDLCGTPNYIA 210
Query: 695 PEYIESGEATSMADVYSFGVVVLEVVTGQ 723
PE + + D++S G ++ ++ G+
Sbjct: 211 PEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 102/238 (42%), Gaps = 43/238 (18%)
Query: 117 EVLGSGGFGKVYRAVL-----PSDGTVVAVKCLAEKGERFE-KTFAAELVAVAHLRHRNL 170
+ LG G FGKV +A + T VAVK L E E + +E + + H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 171 VRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAA----------APLNWEQRKKI 220
++L G C + LLL+ +Y SL R R + + L+ + +
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSL-RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 221 IRG--------LAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHEL 272
G ++ + YL E ++HRD+ N+++ ++ DFGL+R + E
Sbjct: 148 TMGDLISFAWQISQGMQYLAEM---SLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE- 203
Query: 273 QYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
S + Q + + ++ ES + T +SDV+SFG+++ E+V+
Sbjct: 204 -----DSXVKRSQGRIP--------VKWMAIESLFD-HIYTTQSDVWSFGVLLWEIVT 247
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 86/201 (42%), Gaps = 28/201 (13%)
Query: 540 VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSH 599
V VK L + P+ +E L ++ H ++++L G C++ G +L+I +Y+ L
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 600 LLFHNNHRIGHSILQWHHR-------------------YNIIKSLASAILYLHEEWNEQV 640
L + ++G L + ++ + YL E +
Sbjct: 116 FL-RESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---SL 171
Query: 641 IHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIES 700
+HR++ + I + ++ F L+ + D K + G V+ +M+ E +
Sbjct: 172 VHRDLAARNILVAEGRKMKISDFGLSRDVYEED-SXVKRSQGRIPVK----WMAIESLFD 226
Query: 701 GEATSMADVYSFGVVVLEVVT 721
T+ +DV+SFGV++ E+VT
Sbjct: 227 HIYTTQSDVWSFGVLLWEIVT 247
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 35/223 (15%)
Query: 115 EDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAH----LRHRNL 170
ED+ LGSG FG V + V V K E + EL+A A+ L + +
Sbjct: 21 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 80
Query: 171 VRLRGWCVHEDQLLLV--YDYMP-NRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
VR+ G C E +L++ + P N+ L + + +N+ +++ ++
Sbjct: 81 VRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----------IELVHQVSMG 129
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
+ YL E + +HRD+ NV+L +Q+ A++ DFGL++ L + Y + +
Sbjct: 130 MKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK----- 181
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ + PE ++KSDV+SFG+++ E S
Sbjct: 182 --------WPVKWYAPECINYYKF-SSKSDVWSFGVLMWEAFS 215
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 98/209 (46%), Gaps = 18/209 (8%)
Query: 517 ESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKC----PALRTRFSNELQNLARLRHRNL 572
E + + +FGT +G+ + V + + K PAL+ E + +L + +
Sbjct: 21 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 80
Query: 573 VQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYL 632
V++ G C + MLV+ + + L+ L N H +I++ ++ ++ + YL
Sbjct: 81 VRMIGICEAESWMLVM-EMAELGPLNKYLQQNRHVKDKNIIE------LVHQVSMGMKYL 133
Query: 633 HEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGY 692
E +HR++ + + L ++ F L++ L +++ ++ T G V+ +
Sbjct: 134 EES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK----W 186
Query: 693 MSPEYIESGEATSMADVYSFGVVVLEVVT 721
+PE I + +S +DV+SFGV++ E +
Sbjct: 187 YAPECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 35/223 (15%)
Query: 115 EDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAH----LRHRNL 170
ED+ LGSG FG V + V V K E + EL+A A+ L + +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 171 VRLRGWCVHEDQLLLV--YDYMP-NRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
VR+ G C E +L++ + P N+ L + + +N+ +++ ++
Sbjct: 75 VRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----------IELVHQVSMG 123
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
+ YL E + +HRD+ NV+L +Q+ A++ DFGL++ L + Y + +
Sbjct: 124 MKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK----- 175
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ + PE ++KSDV+SFG+++ E S
Sbjct: 176 --------WPVKWYAPECINYYKF-SSKSDVWSFGVLMWEAFS 209
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 98/209 (46%), Gaps = 18/209 (8%)
Query: 517 ESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKC----PALRTRFSNELQNLARLRHRNL 572
E + + +FGT +G+ + V + + K PAL+ E + +L + +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 573 VQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYL 632
V++ G C + MLV+ + + L+ L N H +I++ ++ ++ + YL
Sbjct: 75 VRMIGICEAESWMLVM-EMAELGPLNKYLQQNRHVKDKNIIE------LVHQVSMGMKYL 127
Query: 633 HEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGY 692
E +HR++ + + L ++ F L++ L +++ ++ T G V+ +
Sbjct: 128 EES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK----W 180
Query: 693 MSPEYIESGEATSMADVYSFGVVVLEVVT 721
+PE I + +S +DV+SFGV++ E +
Sbjct: 181 YAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 28/229 (12%)
Query: 108 IGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVA---VAH 164
+G + F + VLG GGFG+V+ + + G + A K L +K + K + +V +A
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 165 LRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRG- 223
+ R +V L + L LV M + ++ N++ P E R
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIY----NVDEDNPGFQEPRAIFYTAQ 297
Query: 224 LAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARN 283
+ + L +LH++ II+RD+K NV+LD N R+ D GLA +++ +
Sbjct: 298 IVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLA--------VELKAGQTK- 345
Query: 284 HQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
T GT G++ PE G D F+ G+ + E+++ R
Sbjct: 346 -------TKGYAGTPGFMAPELLL-GEEYDFSVDYFALGVTLYEMIAAR 386
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ S + +LH+ +I+R++ + LD D N R+ LA L + + +
Sbjct: 298 IVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVEL-------KAGQTKTK 347
Query: 685 SVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
G G+M+PE + E D ++ GV + E++ +
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 98/223 (43%), Gaps = 38/223 (17%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGER--FEKTFAAELVAVAHLRHRNLVRLRGW 176
+G G FG+V++A G VA+K + + E+ F T E+ + L+H N+V L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 177 CVHE--------DQLLLVYDYMPNRS---LDRVLFRRPENLEAAAPLNWEQRKKIIRGLA 225
C + + LV+D+ + L VL + + K++++ L
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK----------FTLSEIKRVMQMLL 134
Query: 226 AALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQ 285
L+Y+H +I+HRD+K +NV++ +L DFGLAR S A+N Q
Sbjct: 135 NGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAF----------SLAKNSQ 181
Query: 286 FHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEV 328
+ + T+ Y PPE D++ G ++ E+
Sbjct: 182 PNRYXNRVV--TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 222
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 98/223 (43%), Gaps = 38/223 (17%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGER--FEKTFAAELVAVAHLRHRNLVRLRGW 176
+G G FG+V++A G VA+K + + E+ F T E+ + L+H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 177 CVHEDQ--------LLLVYDYMPNRS---LDRVLFRRPENLEAAAPLNWEQRKKIIRGLA 225
C + + LV+D+ + L VL + + K++++ L
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK----------FTLSEIKRVMQMLL 135
Query: 226 AALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQ 285
L+Y+H +I+HRD+K +NV++ +L DFGLAR S A+N Q
Sbjct: 136 NGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAF----------SLAKNSQ 182
Query: 286 FHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEV 328
+ + T+ Y PPE D++ G ++ E+
Sbjct: 183 PNRYXNRVV--TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 28/229 (12%)
Query: 108 IGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVA---VAH 164
+G + F + VLG GGFG+V+ + + G + A K L +K + K + +V +A
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 165 LRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRG- 223
+ R +V L + L LV M + ++ N++ P E R
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIY----NVDEDNPGFQEPRAIFYTAQ 297
Query: 224 LAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARN 283
+ + L +LH++ II+RD+K NV+LD N R+ D GLA +++ +
Sbjct: 298 IVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLA--------VELKAGQTK- 345
Query: 284 HQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
T GT G++ PE G D F+ G+ + E+++ R
Sbjct: 346 -------TKGYAGTPGFMAPELLL-GEEYDFSVDYFALGVTLYEMIAAR 386
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ S + +LH+ +I+R++ + LD D N R+ LA L + + +
Sbjct: 298 IVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVEL-------KAGQTKTK 347
Query: 685 SVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
G G+M+PE + E D ++ GV + E++ +
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 28/229 (12%)
Query: 108 IGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVA---VAH 164
+G + F + VLG GGFG+V+ + + G + A K L +K + K + +V +A
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 165 LRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRG- 223
+ R +V L + L LV M + ++ N++ P E R
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIY----NVDEDNPGFQEPRAIFYTAQ 297
Query: 224 LAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARN 283
+ + L +LH++ II+RD+K NV+LD N R+ D GLA +++ +
Sbjct: 298 IVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLA--------VELKAGQTK- 345
Query: 284 HQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
T GT G++ PE G D F+ G+ + E+++ R
Sbjct: 346 -------TKGYAGTPGFMAPELLL-GEEYDFSVDYFALGVTLYEMIAAR 386
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ S + +LH+ +I+R++ + LD D N R+ LA L + + +
Sbjct: 298 IVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVEL-------KAGQTKTK 347
Query: 685 SVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
G G+M+PE + E D ++ GV + E++ +
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 107/232 (46%), Gaps = 36/232 (15%)
Query: 117 EVLGSGGFGKVYRA----VLPSDGTV-VAVKCLAEKGERFEK-TFAAELVAVAHL-RHRN 169
+ LG+G FGKV A ++ SD + VAVK L E+ +EL +++L H N
Sbjct: 29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 88
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENL--EAAAP---------LNWEQRK 218
+V L G C L++ +Y L L R+ ++ +P L+ E
Sbjct: 89 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 148
Query: 219 KIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRT 278
+A + +L + IHRD+ N++L ++ DFGLAR ++++ Y ++
Sbjct: 149 SFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 205
Query: 279 SSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
++ R+ + ++ PES V T +SDV+S+GI + E+ S
Sbjct: 206 NA------------RL--PVKWMAPESIFN-CVYTFESDVWSYGIFLWELFS 242
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 114/284 (40%), Gaps = 54/284 (19%)
Query: 535 DNHQYVLVKRLGMSKCPALRTRFSNELQNLARL-RHRNLVQLCGWCTEQGEMLVIYDYSA 593
D V VK L S R +EL+ L+ L H N+V L G CT G LVI +Y
Sbjct: 51 DAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCC 110
Query: 594 TRILSHLLFHNN-----HRIGHSIL-----------QWHHRYNIIKSLASAILYLHEEWN 637
L + L + +I+ Y + K +A +
Sbjct: 111 YGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA-------S 163
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
+ IHR++ + I L ++ F LA + +ND + GN R +M+PE
Sbjct: 164 KNCIHRDLAARNILLTHGRITKICDFGLARDI-KNDSNY--VVKGN--ARLPVKWMAPES 218
Query: 698 IESGEATSMADVYSFGVVVLEVVT------GQMAVDFRLPEGLLVKRVHEFEARKRPLAE 751
I + T +DV+S+G+ + E+ + M VD + + ++K + + AE
Sbjct: 219 IFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYK--MIKEGFRMLSPEHAPAE 276
Query: 752 LVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
+ D +M+ C ++P RP+ +QI+ +++
Sbjct: 277 MYD-----------IMK------TCWDADPLKRPTFKQIVQLIE 303
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 28/229 (12%)
Query: 108 IGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVA---VAH 164
+G + F + VLG GGFG+V+ + + G + A K L +K + K + +V +A
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 165 LRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRG- 223
+ R +V L + L LV M + ++ N++ P E R
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIY----NVDEDNPGFQEPRAIFYTAQ 297
Query: 224 LAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARN 283
+ + L +LH++ II+RD+K NV+LD N R+ D GLA +++ +
Sbjct: 298 IVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLA--------VELKAGQTK- 345
Query: 284 HQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
T GT G++ PE G D F+ G+ + E+++ R
Sbjct: 346 -------TKGYAGTPGFMAPELLL-GEEYDFSVDYFALGVTLYEMIAAR 386
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ S + +LH+ +I+R++ + LD D N R+ LA L + + +
Sbjct: 298 IVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVEL-------KAGQTKTK 347
Query: 685 SVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
G G+M+PE + E D ++ GV + E++ +
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 107/232 (46%), Gaps = 36/232 (15%)
Query: 117 EVLGSGGFGKVYRA----VLPSDGTV-VAVKCLAEKGERFEK-TFAAELVAVAHL-RHRN 169
+ LG+G FGKV A ++ SD + VAVK L E+ +EL +++L H N
Sbjct: 45 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 104
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENL--EAAAP---------LNWEQRK 218
+V L G C L++ +Y L L R+ ++ +P L+ E
Sbjct: 105 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 164
Query: 219 KIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRT 278
+A + +L + IHRD+ N++L ++ DFGLAR ++++ Y ++
Sbjct: 165 SFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 221
Query: 279 SSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
++ R+ + ++ PES V T +SDV+S+GI + E+ S
Sbjct: 222 NA------------RL--PVKWMAPESIF-NCVYTFESDVWSYGIFLWELFS 258
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 116/284 (40%), Gaps = 54/284 (19%)
Query: 535 DNHQYVLVKRLGMSKCPALRTRFSNELQNLARL-RHRNLVQLCGWCTEQGEMLVIYDYSA 593
D V VK L S R +EL+ L+ L H N+V L G CT G LVI +Y
Sbjct: 67 DAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCC 126
Query: 594 TRILSHLLFHNN-----HRIGHSIL-----------QWHHRYNIIKSLASAILYLHEEWN 637
L + L + +I+ Y + K +A +L +
Sbjct: 127 YGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMA----FLA---S 179
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
+ IHR++ + I L ++ F LA + +ND + GN R +M+PE
Sbjct: 180 KNCIHRDLAARNILLTHGRITKICDFGLARDI-KNDSNY--VVKGN--ARLPVKWMAPES 234
Query: 698 IESGEATSMADVYSFGVVVLEVVT------GQMAVDFRLPEGLLVKRVHEFEARKRPLAE 751
I + T +DV+S+G+ + E+ + M VD + + ++K + + AE
Sbjct: 235 IFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYK--MIKEGFRMLSPEHAPAE 292
Query: 752 LVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
+ D +M+ C ++P RP+ +QI+ +++
Sbjct: 293 MYD-----------IMK------TCWDADPLKRPTFKQIVQLIE 319
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 35/223 (15%)
Query: 115 EDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAH----LRHRNL 170
ED+ LGSG FG V + V V K E + EL+A A+ L + +
Sbjct: 373 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 432
Query: 171 VRLRGWCVHEDQLLLV--YDYMP-NRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
VR+ G C E +L++ + P N+ L + + +N+ +++ ++
Sbjct: 433 VRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----------IELVHQVSMG 481
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
+ YL E + +HRD+ NV+L +Q+ A++ DFGL++ L + Y + +
Sbjct: 482 MKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK----- 533
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ + PE ++KSDV+SFG+++ E S
Sbjct: 534 --------WPVKWYAPECINYYKF-SSKSDVWSFGVLMWEAFS 567
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 105/227 (46%), Gaps = 19/227 (8%)
Query: 500 PREISFKEIISATNNFS-ESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKC----PALR 554
P EI KE+ + E + + +FGT +G+ + V + + K PAL+
Sbjct: 355 PEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK 414
Query: 555 TRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQ 614
E + +L + +V++ G C + MLV+ + + L+ L N H +I++
Sbjct: 415 DELLAEANVMQQLDNPYIVRMIGICEAESWMLVM-EMAELGPLNKYLQQNRHVKDKNIIE 473
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
++ ++ + YL E +HR++ + + L ++ F L++ L +++
Sbjct: 474 ------LVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 524
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
++ T G V+ + +PE I + +S +DV+SFGV++ E +
Sbjct: 525 YYKAQTHGKWPVK----WYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 102/231 (44%), Gaps = 47/231 (20%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGER--FEKTFAAELVAVAHLRHRNLVRLR 174
E +G G FG+V+R G VAVK + + ER F + AE+ LRH N++
Sbjct: 10 ESIGKGRFGEVWRG--KWRGEEVAVKIFSSREERSWFRE---AEIYQTVMLRHENIL--- 61
Query: 175 GWCVHED-------QLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
G+ ++ QL LV DY + SL L R +E K+ A+
Sbjct: 62 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI--------KLALSTASG 113
Query: 228 LHYLHEQL-----ETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSAR 282
L +LH ++ + I HRD+K+ N+++ + D GLA +R SA
Sbjct: 114 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA----------VRHDSAT 163
Query: 283 NHQFHLAETTRIGGTIGYLPPESFQ-----KGSVATAKSDVFSFGIVVLEV 328
+ +A R+ GT Y+ PE K + ++D+++ G+V E+
Sbjct: 164 D-TIDIAPNHRV-GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 107/232 (46%), Gaps = 36/232 (15%)
Query: 117 EVLGSGGFGKVYRA----VLPSDGTV-VAVKCLAEKGERFEK-TFAAELVAVAHL-RHRN 169
+ LG+G FGKV A ++ SD + VAVK L E+ +EL +++L H N
Sbjct: 52 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 111
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENL--EAAAP---------LNWEQRK 218
+V L G C L++ +Y L L R+ ++ +P L+ E
Sbjct: 112 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 171
Query: 219 KIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRT 278
+A + +L + IHRD+ N++L ++ DFGLAR ++++ Y ++
Sbjct: 172 SFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 228
Query: 279 SSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
++ R+ + ++ PES V T +SDV+S+GI + E+ S
Sbjct: 229 NA------------RL--PVKWMAPESIF-NCVYTFESDVWSYGIFLWELFS 265
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 114/284 (40%), Gaps = 54/284 (19%)
Query: 535 DNHQYVLVKRLGMSKCPALRTRFSNELQNLARL-RHRNLVQLCGWCTEQGEMLVIYDYSA 593
D V VK L S R +EL+ L+ L H N+V L G CT G LVI +Y
Sbjct: 74 DAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCC 133
Query: 594 TRILSHLLFHNN-----HRIGHSIL-----------QWHHRYNIIKSLASAILYLHEEWN 637
L + L + +I+ Y + K +A +
Sbjct: 134 YGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA-------S 186
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
+ IHR++ + I L ++ F LA + +ND + GN R +M+PE
Sbjct: 187 KNCIHRDLAARNILLTHGRITKICDFGLARDI-KNDSNY--VVKGN--ARLPVKWMAPES 241
Query: 698 IESGEATSMADVYSFGVVVLEVVT------GQMAVDFRLPEGLLVKRVHEFEARKRPLAE 751
I + T +DV+S+G+ + E+ + M VD + + ++K + + AE
Sbjct: 242 IFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYK--MIKEGFRMLSPEHAPAE 299
Query: 752 LVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
+ D +M+ C ++P RP+ +QI+ +++
Sbjct: 300 MYD-----------IMK------TCWDADPLKRPTFKQIVQLIE 326
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 102/231 (44%), Gaps = 47/231 (20%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGER--FEKTFAAELVAVAHLRHRNLVRLR 174
E +G G FG+V+R G VAVK + + ER F + AE+ LRH N++
Sbjct: 9 ESIGKGRFGEVWRG--KWRGEEVAVKIFSSREERSWFRE---AEIYQTVMLRHENIL--- 60
Query: 175 GWCVHED-------QLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
G+ ++ QL LV DY + SL L R +E K+ A+
Sbjct: 61 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI--------KLALSTASG 112
Query: 228 LHYLHEQL-----ETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSAR 282
L +LH ++ + I HRD+K+ N+++ + D GLA +R SA
Sbjct: 113 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA----------VRHDSAT 162
Query: 283 NHQFHLAETTRIGGTIGYLPPESFQ-----KGSVATAKSDVFSFGIVVLEV 328
+ +A R+ GT Y+ PE K + ++D+++ G+V E+
Sbjct: 163 D-TIDIAPNHRV-GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 102/231 (44%), Gaps = 47/231 (20%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGER--FEKTFAAELVAVAHLRHRNLVRLR 174
E +G G FG+V+R G VAVK + + ER F + AE+ LRH N++
Sbjct: 12 ESIGKGRFGEVWRG--KWRGEEVAVKIFSSREERSWFRE---AEIYQTVMLRHENIL--- 63
Query: 175 GWCVHED-------QLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
G+ ++ QL LV DY + SL L R +E K+ A+
Sbjct: 64 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI--------KLALSTASG 115
Query: 228 LHYLHEQL-----ETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSAR 282
L +LH ++ + I HRD+K+ N+++ + D GLA +R SA
Sbjct: 116 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA----------VRHDSAT 165
Query: 283 NHQFHLAETTRIGGTIGYLPPESFQ-----KGSVATAKSDVFSFGIVVLEV 328
+ +A R+ GT Y+ PE K + ++D+++ G+V E+
Sbjct: 166 D-TIDIAPNHRV-GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 30/236 (12%)
Query: 106 LYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAA-----ELV 160
+Y S+ F +LG G +G V A G +VA+K K E F+K A E+
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIK----KIEPFDKPLFALRTLREIK 61
Query: 161 AVAHLRHRNLVRL----RGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQ 216
+ H +H N++ + R + + + L RV+ + L+ +
Sbjct: 62 ILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI--------STQMLSDDH 113
Query: 217 RKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQM 276
+ I A+ LH + +IHRD+K SN++++S + ++ DFGLAR ++ +
Sbjct: 114 IQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIID---ESAA 167
Query: 277 RTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
S Q + E T Y PE + + DV+S G ++ E+ R
Sbjct: 168 DNSEPTGQQSGMTEYV---ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 35/223 (15%)
Query: 115 EDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAH----LRHRNL 170
ED+ LGSG FG V + V V K E + EL+A A+ L + +
Sbjct: 374 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 433
Query: 171 VRLRGWCVHEDQLLLV--YDYMP-NRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
VR+ G C E +L++ + P N+ L + + +N+ +++ ++
Sbjct: 434 VRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----------IELVHQVSMG 482
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
+ YL E + +HRD+ NV+L +Q+ A++ DFGL++ L + Y + +
Sbjct: 483 MKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK----- 534
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ + PE ++KSDV+SFG+++ E S
Sbjct: 535 --------WPVKWYAPECINYYKF-SSKSDVWSFGVLMWEAFS 568
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 105/227 (46%), Gaps = 19/227 (8%)
Query: 500 PREISFKEIISATNNFS-ESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKC----PALR 554
P EI KE+ + E + + +FGT +G+ + V + + K PAL+
Sbjct: 356 PEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK 415
Query: 555 TRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQ 614
E + +L + +V++ G C + MLV+ + + L+ L N H +I++
Sbjct: 416 DELLAEANVMQQLDNPYIVRMIGICEAESWMLVM-EMAELGPLNKYLQQNRHVKDKNIIE 474
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
++ ++ + YL E +HR++ + + L ++ F L++ L +++
Sbjct: 475 ------LVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 525
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
++ T G V+ + +PE I + +S +DV+SFGV++ E +
Sbjct: 526 YYKAQTHGKWPVK----WYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 30/236 (12%)
Query: 106 LYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAA-----ELV 160
+Y S+ F +LG G +G V A G +VA+K K E F+K A E+
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIK----KIEPFDKPLFALRTLREIK 61
Query: 161 AVAHLRHRNLVRL----RGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQ 216
+ H +H N++ + R + + + L RV+ + L+ +
Sbjct: 62 ILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI--------STQMLSDDH 113
Query: 217 RKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQM 276
+ I A+ LH + +IHRD+K SN++++S + ++ DFGLAR ++ +
Sbjct: 114 IQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIID---ESAA 167
Query: 277 RTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
S Q + E T Y PE + + DV+S G ++ E+ R
Sbjct: 168 DNSEPTGQQSGMVEFV---ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 107/232 (46%), Gaps = 36/232 (15%)
Query: 117 EVLGSGGFGKVYRA----VLPSDGTV-VAVKCLAEKGERFEK-TFAAELVAVAHL-RHRN 169
+ LG+G FGKV A ++ SD + VAVK L E+ +EL +++L H N
Sbjct: 47 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 106
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENL--EAAAP---------LNWEQRK 218
+V L G C L++ +Y L L R+ ++ +P L+ E
Sbjct: 107 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 166
Query: 219 KIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRT 278
+A + +L + IHRD+ N++L ++ DFGLAR ++++ Y ++
Sbjct: 167 SFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 223
Query: 279 SSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
++ R+ + ++ PES V T +SDV+S+GI + E+ S
Sbjct: 224 NA------------RL--PVKWMAPESIF-NCVYTFESDVWSYGIFLWELFS 260
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 114/284 (40%), Gaps = 54/284 (19%)
Query: 535 DNHQYVLVKRLGMSKCPALRTRFSNELQNLARL-RHRNLVQLCGWCTEQGEMLVIYDYSA 593
D V VK L S R +EL+ L+ L H N+V L G CT G LVI +Y
Sbjct: 69 DAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCC 128
Query: 594 TRILSHLLFHNN-----HRIGHSIL-----------QWHHRYNIIKSLASAILYLHEEWN 637
L + L + +I+ Y + K +A +
Sbjct: 129 YGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA-------S 181
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
+ IHR++ + I L ++ F LA + +ND + GN R +M+PE
Sbjct: 182 KNCIHRDLAARNILLTHGRITKICDFGLARDI-KNDSNY--VVKGN--ARLPVKWMAPES 236
Query: 698 IESGEATSMADVYSFGVVVLEVVT------GQMAVDFRLPEGLLVKRVHEFEARKRPLAE 751
I + T +DV+S+G+ + E+ + M VD + + ++K + + AE
Sbjct: 237 IFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYK--MIKEGFRMLSPEHAPAE 294
Query: 752 LVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795
+ D +M+ C ++P RP+ +QI+ +++
Sbjct: 295 MYD-----------IMK------TCWDADPLKRPTFKQIVQLIE 321
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 102/231 (44%), Gaps = 47/231 (20%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGER--FEKTFAAELVAVAHLRHRNLVRLR 174
E +G G FG+V+R G VAVK + + ER F + AE+ LRH N++
Sbjct: 15 ESIGKGRFGEVWRG--KWRGEEVAVKIFSSREERSWFRE---AEIYQTVMLRHENIL--- 66
Query: 175 GWCVHED-------QLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
G+ ++ QL LV DY + SL L R +E K+ A+
Sbjct: 67 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI--------KLALSTASG 118
Query: 228 LHYLHEQL-----ETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSAR 282
L +LH ++ + I HRD+K+ N+++ + D GLA +R SA
Sbjct: 119 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA----------VRHDSAT 168
Query: 283 NHQFHLAETTRIGGTIGYLPPESFQ-----KGSVATAKSDVFSFGIVVLEV 328
+ +A R+ GT Y+ PE K + ++D+++ G+V E+
Sbjct: 169 D-TIDIAPNHRV-GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 102/231 (44%), Gaps = 47/231 (20%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGER--FEKTFAAELVAVAHLRHRNLVRLR 174
E +G G FG+V+R G VAVK + + ER F + AE+ LRH N++
Sbjct: 35 ESIGKGRFGEVWRG--KWRGEEVAVKIFSSREERSWFRE---AEIYQTVMLRHENIL--- 86
Query: 175 GWCVHED-------QLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
G+ ++ QL LV DY + SL L R +E K+ A+
Sbjct: 87 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI--------KLALSTASG 138
Query: 228 LHYLHEQL-----ETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSAR 282
L +LH ++ + I HRD+K+ N+++ + D GLA +R SA
Sbjct: 139 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA----------VRHDSAT 188
Query: 283 NHQFHLAETTRIGGTIGYLPPESFQ-----KGSVATAKSDVFSFGIVVLEV 328
+ +A R+ GT Y+ PE K + ++D+++ G+V E+
Sbjct: 189 D-TIDIAPNHRV-GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 102/231 (44%), Gaps = 47/231 (20%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGER--FEKTFAAELVAVAHLRHRNLVRLR 174
E +G G FG+V+R G VAVK + + ER F + AE+ LRH N++
Sbjct: 48 ESIGKGRFGEVWRG--KWRGEEVAVKIFSSREERSWFRE---AEIYQTVMLRHENIL--- 99
Query: 175 GWCVHED-------QLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
G+ ++ QL LV DY + SL L R +E K+ A+
Sbjct: 100 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI--------KLALSTASG 151
Query: 228 LHYLHEQL-----ETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSAR 282
L +LH ++ + I HRD+K+ N+++ + D GLA +R SA
Sbjct: 152 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA----------VRHDSAT 201
Query: 283 NHQFHLAETTRIGGTIGYLPPESFQ-----KGSVATAKSDVFSFGIVVLEV 328
+ +A R+ GT Y+ PE K + ++D+++ G+V E+
Sbjct: 202 D-TIDIAPNHRV-GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 100/218 (45%), Gaps = 31/218 (14%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
E+LG G FG+V++ + G +A K + +G + ++ E+ + L H NL++L
Sbjct: 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDA 154
Query: 177 CVHEDQLLLVYDYMPNRSL-DRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQL 235
++ ++LV +Y+ L DR++ E L ++ + + ++H+
Sbjct: 155 FESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTIL-------FMKQICEGIRHMHQMY 207
Query: 236 ETQIIHRDVKTSNVMLDSQ--YNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTR 293
I+H D+K N++ ++ ++ DFGLAR +Y+ R N
Sbjct: 208 ---ILHLDLKPENILCVNRDAKQIKIIDFGLAR------RYKPREKLKVNF--------- 249
Query: 294 IGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
GT +L PE V+ +D++S G++ ++SG
Sbjct: 250 --GTPEFLAPEVVNYDFVSFP-TDMWSVGVIAYMLLSG 284
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 124/272 (45%), Gaps = 29/272 (10%)
Query: 74 RKEHSGLFHDMEGVQMSEKVGGDNPRIFSYAELYIGSNGFD--EDEV-----LGSGGFGK 126
+K + GL E + + + S A + IG+ F+ D++ LG G +G
Sbjct: 7 KKRNPGLKIPKEAFEQPQTSSTPPRDLDSKACISIGNQNFEVKADDLEPIMELGRGAYGV 66
Query: 127 VYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAEL-VAVAHLRHRNLVRLRGWCVHEDQLL 184
V + G ++AVK + A + +K +L +++ + V G E +
Sbjct: 67 VEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVW 126
Query: 185 LVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDV 244
+ + M + SLD+ F + + ++ + + KI + AL +LH +L +IHRDV
Sbjct: 127 ICMELM-DTSLDK--FYK-QVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDV 180
Query: 245 KTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPE 304
K SNV++++ ++ DFG++ +L + +T A + E RI PE
Sbjct: 181 KPSNVLINALGQVKMCDFGISGYLVDSV---AKTIDAGCKPYMAPE--RIN-------PE 228
Query: 305 SFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
QKG + KSD++S GI ++E+ R D
Sbjct: 229 LNQKG--YSVKSDIWSLGITMIELAILRFPYD 258
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 98/209 (46%), Gaps = 18/209 (8%)
Query: 517 ESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKC----PALRTRFSNELQNLARLRHRNL 572
E + + +FGT +G+ + V + + K PAL+ E + +L + +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 573 VQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYL 632
V++ G C + MLV+ + + L+ L N H +I++ ++ ++ + YL
Sbjct: 75 VRMIGICEAESWMLVM-EMAELGPLNKYLQQNRHVKDKNIIE------LVHQVSMGMKYL 127
Query: 633 HEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGY 692
E +HR++ + + L ++ F L++ L +++ ++ T G V+ +
Sbjct: 128 EES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVK----W 180
Query: 693 MSPEYIESGEATSMADVYSFGVVVLEVVT 721
+PE I + +S +DV+SFGV++ E +
Sbjct: 181 YAPECINYYKFSSKSDVWSFGVLMWEAFS 209
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 37/224 (16%)
Query: 115 EDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAH----LRHRNL 170
ED+ LGSG FG V + V V K E + EL+A A+ L + +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 171 VRLRGWCVHEDQLLLV--YDYMP-NRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
VR+ G C E +L++ + P N+ L + + +N+ +++ ++
Sbjct: 75 VRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----------IELVHQVSMG 123
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLE-HELQYQMRTSSARNHQF 286
+ YL E + +HRD+ NV+L +Q+ A++ DFGL++ L E Y+ +T ++
Sbjct: 124 MKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKW 180
Query: 287 HLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ E I Y ++KSDV+SFG+++ E S
Sbjct: 181 YAPE------CINYYK---------FSSKSDVWSFGVLMWEAFS 209
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 95/235 (40%), Gaps = 44/235 (18%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG------ERFEKTFAAELVAVAHLR 166
++ E+LG G V R + AVK + G E ++ A L V LR
Sbjct: 6 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 65
Query: 167 ----HRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIR 222
H N+++L+ LV+D M L L + L+ ++ +KI+R
Sbjct: 66 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-------VTLSEKETRKIMR 118
Query: 223 GLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSAR 282
L + LH+ I+HRD+K N++LD N +L DFG +
Sbjct: 119 ALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS----------------- 158
Query: 283 NHQFHLAETTR-IGGTIGYLPPE----SFQKGSVATAKS-DVFSFGIVVLEVVSG 331
Q E R + GT YL PE S K D++S G+++ +++G
Sbjct: 159 -CQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 17/109 (15%)
Query: 620 NIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKA 679
I+++L I LH+ ++HR++ I LD DMN +L F F + D G +
Sbjct: 115 KIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFG---FSCQLDPGEKL- 167
Query: 680 TSGNRSVRGIFGYMSPEYIESGEATSM------ADVYSFGVVVLEVVTG 722
R V G Y++PE IE + D++S GV++ ++ G
Sbjct: 168 ----REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 118/264 (44%), Gaps = 42/264 (15%)
Query: 119 LGSGGFGKVYRA-VLPSDGT----VVAVKCLAEKGERFE-KTFAAELVAVAHL-RHRNLV 171
LG G FG+V A D T VAVK L E E + +EL + H+ H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 172 RLRGWCVHEDQLLLVY----------DYMPNRSLDRVLFRR-PENLEAAAPLNWEQRKKI 220
L G C L+V Y+ ++ + V ++ PE+L L E
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDF-LTLEHLICY 155
Query: 221 IRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSS 280
+A + +L + + IHRD+ N++L + ++ DFGLAR + + Y +R
Sbjct: 156 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-VRKGD 211
Query: 281 ARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
AR + ++ PE+ V T +SDV+SFG+++ E+ S + YP
Sbjct: 212 ARL-------------PLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGAS---PYP 254
Query: 341 DDQIILLDWIRRLSDEGKVLQAGD 364
+I ++ RRL EG ++A D
Sbjct: 255 GVKID-EEFCRRLK-EGTRMRAPD 276
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 13/161 (8%)
Query: 569 HRNLVQLCGWCTEQG-EMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLAS 627
H N+V L G CT+ G ++VI ++ LS L + Y +L
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEH 151
Query: 628 AILYLHE-----EW--NEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKAT 680
I Y + E+ + + IHR++ + I L ++ F LA + ++ RK
Sbjct: 152 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 211
Query: 681 SGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
+ R +M+PE I T +DV+SFGV++ E+ +
Sbjct: 212 A-----RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 95/235 (40%), Gaps = 44/235 (18%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG------ERFEKTFAAELVAVAHLR 166
++ E+LG G V R + AVK + G E ++ A L V LR
Sbjct: 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 167 ----HRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIR 222
H N+++L+ LV+D M L L + L+ ++ +KI+R
Sbjct: 79 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-------VTLSEKETRKIMR 131
Query: 223 GLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSAR 282
L + LH+ I+HRD+K N++LD N +L DFG +
Sbjct: 132 ALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS----------------- 171
Query: 283 NHQFHLAETTR-IGGTIGYLPPE----SFQKGSVATAKS-DVFSFGIVVLEVVSG 331
Q E R + GT YL PE S K D++S G+++ +++G
Sbjct: 172 -CQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 17/109 (15%)
Query: 620 NIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKA 679
I+++L I LH+ ++HR++ I LD DMN +L F F + D G +
Sbjct: 128 KIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFG---FSCQLDPGEKL- 180
Query: 680 TSGNRSVRGIFGYMSPEYIESGEATSM------ADVYSFGVVVLEVVTG 722
RSV G Y++PE IE + D++S GV++ ++ G
Sbjct: 181 ----RSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 95/235 (40%), Gaps = 44/235 (18%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG------ERFEKTFAAELVAVAHLR 166
++ E+LG G V R + AVK + G E ++ A L V LR
Sbjct: 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 167 ----HRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIR 222
H N+++L+ LV+D M L L + L+ ++ +KI+R
Sbjct: 79 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-------VTLSEKETRKIMR 131
Query: 223 GLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSAR 282
L + LH+ I+HRD+K N++LD N +L DFG +
Sbjct: 132 ALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS----------------- 171
Query: 283 NHQFHLAETTR-IGGTIGYLPPE----SFQKGSVATAKS-DVFSFGIVVLEVVSG 331
Q E R + GT YL PE S K D++S G+++ +++G
Sbjct: 172 -CQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 17/109 (15%)
Query: 620 NIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKA 679
I+++L I LH+ ++HR++ I LD DMN +L F F + D G +
Sbjct: 128 KIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFG---FSCQLDPGEKL- 180
Query: 680 TSGNRSVRGIFGYMSPEYIESGEATSM------ADVYSFGVVVLEVVTG 722
R V G Y++PE IE + D++S GV++ ++ G
Sbjct: 181 ----REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 98/224 (43%), Gaps = 34/224 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLV 171
+D +VLG+G F +V A +VA+KC+A+K E E + E+ + ++H N+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSL-DRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
L L L+ + L DR++ + A+ ++I + A+ Y
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS--------RLIFQVLDAVKY 131
Query: 231 LHEQLETQIIHRDVKTSNVM---LDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
LH + I+HRD+K N++ LD + DFGL++ M +
Sbjct: 132 LH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK---------MEDPGSV----- 174
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
+ GT GY+ PE + + A D +S G++ ++ G
Sbjct: 175 ---LSTACGTPGYVAPEVLAQKPYSKA-VDCWSIGVIAYILLCG 214
Score = 35.8 bits (81), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 87/220 (39%), Gaps = 33/220 (15%)
Query: 536 NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYD-YSAT 594
+ V +K + NE+ L +++H N+V L G + +I S
Sbjct: 42 TQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGG 101
Query: 595 RILSHLL---FHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAI- 650
+ ++ F+ I Q + A+ YLH + ++HR++ +
Sbjct: 102 ELFDRIVEKGFYTERDASRLIFQ----------VLDAVKYLH---DLGIVHRDLKPENLL 148
Query: 651 --TLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMAD 708
+LD D + F L++ D G +T+ G GY++PE + + D
Sbjct: 149 YYSLDEDSKIMISDFGLSKM---EDPGSVLSTAC-----GTPGYVAPEVLAQKPYSKAVD 200
Query: 709 VYSFGVVVLEVVTGQMAV----DFRLPEGLLVKRVHEFEA 744
+S GV+ ++ G D +L E +L K +EF++
Sbjct: 201 CWSIGVIAYILLCGYPPFYDENDAKLFEQIL-KAEYEFDS 239
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 118/264 (44%), Gaps = 42/264 (15%)
Query: 119 LGSGGFGKVYRA-VLPSDGT----VVAVKCLAEKGERFE-KTFAAELVAVAHL-RHRNLV 171
LG G FG+V A D T VAVK L E E + +EL + H+ H N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 172 RLRGWCVHEDQLLLVY----------DYMPNRSLDRVLFR-RPENLEAAAPLNWEQRKKI 220
L G C L+V Y+ ++ + V ++ PE+L L E
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF-LTLEHLICY 190
Query: 221 IRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSS 280
+A + +L + + IHRD+ N++L + ++ DFGLAR + + Y +R
Sbjct: 191 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-VRKGD 246
Query: 281 ARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
AR + ++ PE+ V T +SDV+SFG+++ E+ S + YP
Sbjct: 247 ARL-------------PLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGAS---PYP 289
Query: 341 DDQIILLDWIRRLSDEGKVLQAGD 364
+I ++ RRL EG ++A D
Sbjct: 290 GVKID-EEFCRRLK-EGTRMRAPD 311
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 13/161 (8%)
Query: 569 HRNLVQLCGWCTEQG-EMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLAS 627
H N+V L G CT+ G ++VI ++ LS L + + Y +L
Sbjct: 127 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 186
Query: 628 AILY-------LHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKAT 680
I Y + + + IHR++ + I L ++ F LA + ++ RK
Sbjct: 187 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 246
Query: 681 SGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
+ R +M+PE I T +DV+SFGV++ E+ +
Sbjct: 247 A-----RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 95/222 (42%), Gaps = 31/222 (13%)
Query: 116 DEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRG 175
D V+G G FG VY D ++C + R + E A LR L+R
Sbjct: 26 DRVIGKGHFGVVYHGEY-IDQAQNRIQCAIKSLSRITEMQQVE----AFLREGLLMRGLN 80
Query: 176 WCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGL-------AAAL 228
H + L L+ +P L VL + + + QR ++ L A +
Sbjct: 81 ---HPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGM 137
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YL EQ + +HRD+ N MLD + ++ DFGLAR + Y S + H+
Sbjct: 138 EYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYY-----SVQQHRH-- 187
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
R+ + + ES Q T KSDV+SFG+++ E+++
Sbjct: 188 ---ARL--PVKWTALESLQTYRF-TTKSDVWSFGVLLWELLT 223
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 85/180 (47%), Gaps = 27/180 (15%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+A + YL E+ + +HR++ + LD ++ F LA + ++ + +R
Sbjct: 133 VARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREY---YSVQQHR 186
Query: 685 SVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEA 744
R + + E +++ T+ +DV+SFGV++ E++T + A +R + + F A
Sbjct: 187 HARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLT-RGAPPYRHIDPF---DLTHFLA 242
Query: 745 RKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMR-------QILSILDGN 797
+ R L + EY L ++++ C ++P +RP+ R QI+S L G+
Sbjct: 243 QGRRLPQ-------PEYCPDSLYQVMQ---QCWEADPAVRPTFRVLVGEVEQIVSALLGD 292
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 118/264 (44%), Gaps = 42/264 (15%)
Query: 119 LGSGGFGKVYRA-VLPSDGT----VVAVKCLAEKGERFE-KTFAAELVAVAHL-RHRNLV 171
LG G FG+V A D T VAVK L E E + +EL + H+ H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 172 RLRGWCVHEDQLLLVYD----------YMPNRSLDRVLFR-RPENLEAAAPLNWEQRKKI 220
L G C L+V Y+ ++ + V ++ PE+L L E
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF-LTLEHLICY 144
Query: 221 IRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSS 280
+A + +L + + IHRD+ N++L + ++ DFGLAR + + Y +R
Sbjct: 145 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-VRKGD 200
Query: 281 ARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
AR + ++ PE+ V T +SDV+SFG+++ E+ S + YP
Sbjct: 201 ARL-------------PLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGAS---PYP 243
Query: 341 DDQIILLDWIRRLSDEGKVLQAGD 364
+I ++ RRL EG ++A D
Sbjct: 244 GVKID-EEFCRRLK-EGTRMRAPD 265
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 13/161 (8%)
Query: 569 HRNLVQLCGWCTEQG-EMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLAS 627
H N+V L G CT+ G ++VI ++ LS L + + Y +L
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 628 AILY-------LHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKAT 680
I Y + + + IHR++ + I L ++ F LA + ++ RK
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 681 SGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
+ R +M+PE I T +DV+SFGV++ E+ +
Sbjct: 201 A-----RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 118/264 (44%), Gaps = 42/264 (15%)
Query: 119 LGSGGFGKVYRA-VLPSDGT----VVAVKCLAEKGERFE-KTFAAELVAVAHL-RHRNLV 171
LG G FG+V A D T VAVK L E E + +EL + H+ H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 172 RLRGWCVHEDQLLLVY----------DYMPNRSLDRVLFR-RPENLEAAAPLNWEQRKKI 220
L G C L+V Y+ ++ + V ++ PE+L L E
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF-LTLEHLICY 153
Query: 221 IRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSS 280
+A + +L + + IHRD+ N++L + ++ DFGLAR + + Y +R
Sbjct: 154 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-VRKGD 209
Query: 281 ARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
AR + ++ PE+ V T +SDV+SFG+++ E+ S + YP
Sbjct: 210 ARL-------------PLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGAS---PYP 252
Query: 341 DDQIILLDWIRRLSDEGKVLQAGD 364
+I ++ RRL EG ++A D
Sbjct: 253 GVKID-EEFCRRLK-EGTRMRAPD 274
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 13/161 (8%)
Query: 569 HRNLVQLCGWCTEQG-EMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLAS 627
H N+V L G CT+ G ++VI ++ LS L + + Y +L
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 628 AILY-------LHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKAT 680
I Y + + + IHR++ + I L ++ F LA + ++ RK
Sbjct: 150 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 209
Query: 681 SGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
+ R +M+PE I T +DV+SFGV++ E+ +
Sbjct: 210 A-----RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 103/235 (43%), Gaps = 47/235 (20%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLV-----RL 173
+G G +G+V+ + V V E+ F +T E+ +RH N++ +
Sbjct: 45 IGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRET---EIYQTVLMRHENILGFIAADI 101
Query: 174 RG---WCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
+G W QL L+ DY N SL L + L+A + L K+ + L +
Sbjct: 102 KGTGSWT----QLYLITDYHENGSLYDYL--KSTTLDAKSML------KLAYSSVSGLCH 149
Query: 231 LHEQL-----ETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQ 285
LH ++ + I HRD+K+ N+++ + D GLA ++ S N +
Sbjct: 150 LHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA----------VKFISDTN-E 198
Query: 286 FHLAETTRIGGTIGYLPPESFQKG-----SVATAKSDVFSFGIVVLEVVSGRRAV 335
+ TR+ GT Y+PPE + + +D++SFG+++ EV RR V
Sbjct: 199 VDIPPNTRV-GTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV--ARRCV 250
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 22/179 (12%)
Query: 624 SLASAILYLHEEW-----NEQVIHRNITSSAITLDPDMNPRLGSFALA-EFLTRNDHGHR 677
S S + +LH E + HR++ S I + + + LA +F++ D
Sbjct: 142 SSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFIS--DTNEV 199
Query: 678 KATSGNRSVRGIFGYMSPEYIESG------EATSMADVYSFGVVVLEV----VTGQMAVD 727
R G YM PE ++ ++ MAD+YSFG+++ EV V+G + +
Sbjct: 200 DIPPNTRV--GTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEE 257
Query: 728 FRLPEGLLVKRVHEFE-ARKRPLAELVDLSLNGEYNHKELMRLI-KLGIACTLSNPELR 784
++LP LV +E R+ + + S ++ E +R + KL C NP R
Sbjct: 258 YQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASR 316
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 106/250 (42%), Gaps = 49/250 (19%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAE--LVAVAHLRHRNLVRL- 173
E++G G +G VY+ L V V A + + F E + V + H N+ R
Sbjct: 19 ELIGRGRYGAVYKGSLDERPVAVKVFSFANR-----QNFINEKNIYRVPLMEHDNIARFI 73
Query: 174 ----RGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
R + LLV +Y PN SL + L +L + +W ++ + L
Sbjct: 74 VGDERVTADGRMEYLLVMEYYPNGSLXKYL-----SLHTS---DWVSSCRLAHSVTRGLA 125
Query: 230 YLHEQL------ETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARN 283
YLH +L + I HRD+ + NV++ + + DFGL+ MR + R
Sbjct: 126 YLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS----------MRLTGNRL 175
Query: 284 HQFHLAETTRIG--GTIGYLPPESFQKGSV-------ATAKSDVFSFGIVVLEVVSGRRA 334
+ + I GTI Y+ PE + G+V A + D+++ G++ E+ R
Sbjct: 176 VRPGEEDNAAISEVGTIRYMAPEVLE-GAVNLRDXESALKQVDMYALGLIYWEIF--MRC 232
Query: 335 VDLTYPDDQI 344
DL +P + +
Sbjct: 233 TDL-FPGESV 241
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 99/226 (43%), Gaps = 34/226 (15%)
Query: 110 SNGFDEDEVLGSGGFG--KVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRH 167
S+ +D + +GSG FG ++ R L + +VAVK + E+G ++ E++ LRH
Sbjct: 19 SDRYDFVKDIGSGNFGVARLMRDKLTKE--LVAVKYI-ERGAAIDENVQREIINHRSLRH 75
Query: 168 RNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
N+VR + + L ++ +Y L E + A + ++ + + L +
Sbjct: 76 PNIVRFKEVILTPTHLAIIMEYASGGELY-------ERICNAGRFSEDEARFFFQQLLSG 128
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLG--DFGLARWLEHELQYQMRTSSARNHQ 285
+ Y H QI HRD+K N +LD RL DFG ++ L Q +++
Sbjct: 129 VSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSK--SSVLHSQPKSTV----- 178
Query: 286 FHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
GT Y+ PE + +DV+S G+ + ++ G
Sbjct: 179 ----------GTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 96/240 (40%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ A L + + +I +
Sbjct: 86 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRG 133
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 134 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 175
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 176 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 77/169 (45%), Gaps = 16/169 (9%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + + L
Sbjct: 63 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCAKLT 119
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 120 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 175
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
AT R+ + +M D++S G ++ E++TG+
Sbjct: 176 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGR 216
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 179
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 180 ----TGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 78/170 (45%), Gaps = 18/170 (10%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA H
Sbjct: 124 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR------H 174
Query: 675 GHRKATSGNRSVRGIFGYMSPE-YIESGEATSMADVYSFGVVVLEVVTGQ 723
+ T G + R Y +PE + + D++S G ++ E++TG+
Sbjct: 175 TDDEMT-GYVATRW---YRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 118/264 (44%), Gaps = 42/264 (15%)
Query: 119 LGSGGFGKVYRA-VLPSDGT----VVAVKCLAEKGERFE-KTFAAELVAVAHL-RHRNLV 171
LG G FG+V A D T VAVK L E E + +EL + H+ H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 172 RLRGWCVHEDQLLLVYD----------YMPNRSLDRVLFR-RPENLEAAAPLNWEQRKKI 220
L G C L+V Y+ ++ + V ++ PE+L L E
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF-LTLEHLICY 144
Query: 221 IRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSS 280
+A + +L + + IHRD+ N++L + ++ DFGLAR + + Y +R
Sbjct: 145 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-VRKGD 200
Query: 281 ARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
AR + ++ PE+ V T +SDV+SFG+++ E+ S + YP
Sbjct: 201 ARL-------------PLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGAS---PYP 243
Query: 341 DDQIILLDWIRRLSDEGKVLQAGD 364
+I ++ RRL EG ++A D
Sbjct: 244 GVKID-EEFCRRLK-EGTRMRAPD 265
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 13/161 (8%)
Query: 569 HRNLVQLCGWCTEQG-EMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLAS 627
H N+V L G CT+ G ++VI ++ LS L + + Y +L
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 628 AILYLHE-----EW--NEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKAT 680
I Y + E+ + + IHR++ + I L ++ F LA + ++ RK
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 681 SGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
+ R +M+PE I T +DV+SFGV++ E+ +
Sbjct: 201 A-----RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 110 SNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRN 169
S+ F+ + LG G VYR A+K L + ++ K E+ + L H N
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHPN 109
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSL-DRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
+++L+ ++ LV + + L DR++ + + AA + K+I+ +A
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAA----DAVKQILEAVA--- 162
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDS---QYNARLGDFGLARWLEHELQYQMRTSSARNHQ 285
YLHE I+HRD+K N++ + ++ DFGL++ +EH Q M+T
Sbjct: 163 -YLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH--QVLMKT------- 209
Query: 286 FHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
+ GT GY PE +G + D++S GI+ ++ G
Sbjct: 210 --------VCGTPGYCAPEIL-RGCAYGPEVDMWSVGIITYILLCG 246
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 14/106 (13%)
Query: 620 NIIKSLASAILYLHEEWNEQVIHRNITSSAI---TLDPDMNPRLGSFALAEFLTRNDHGH 676
+ +K + A+ YLHE ++HR++ + T PD ++ F L++ + H
Sbjct: 152 DAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE-----H 203
Query: 677 RKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
+ ++V G GY +PE + D++S G++ ++ G
Sbjct: 204 QVLM---KTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 95/220 (43%), Gaps = 32/220 (14%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRN--LVRLRGW 176
+GSG G+V++ G V+AVK + G + E + V H +V+ G
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 177 CVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLE 236
+ + + + M + L +R + P+ K+ + AL+YL E+
Sbjct: 93 FITNTDVFIAMELM--GTCAEKLKKRMQ-----GPIPERILGKMTVAIVKALYYLKEK-- 143
Query: 237 TQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGG 296
+IHRDVK SN++LD + +L DFG++ L + A++ R G
Sbjct: 144 HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD--------KAKD---------RSAG 186
Query: 297 TIGYLPPESFQKGSVATA----KSDVFSFGIVVLEVVSGR 332
Y+ PE ++DV+S GI ++E+ +G+
Sbjct: 187 CAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 15/106 (14%)
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
++ A+ YL E+ VIHR++ S I LD +L F ++ L + R A
Sbjct: 132 AIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA---- 185
Query: 684 RSVRGIFGYMSPEYIESGEATS-----MADVYSFGVVVLEVVTGQM 724
G YM+PE I+ + T ADV+S G+ ++E+ TGQ
Sbjct: 186 ----GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQF 227
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 102/220 (46%), Gaps = 31/220 (14%)
Query: 116 DEVLGSGGFGKVYRAV--LPSDGTVVAVKCLAEKGERFEKTFAAELVAVAH-LRHRNLVR 172
D LG G FG V + V + VA+K L + E+ + + H L + +VR
Sbjct: 341 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 400
Query: 173 LRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
L G C E L+LV + L + L + E + + +++ ++ + YL
Sbjct: 401 LIGVCQAE-ALMLVMEMAGGGPLHKFLVGKREEIPVS------NVAELLHQVSMGMKYLE 453
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETT 292
E+ +HR++ NV+L +++ A++ DFGL++ L + Y S+ +
Sbjct: 454 EK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGK---------- 500
Query: 293 RIGGTIGYLPPE--SFQKGSVATAKSDVFSFGIVVLEVVS 330
+ + PE +F+K S ++SDV+S+G+ + E +S
Sbjct: 501 ---WPLKWYAPECINFRKFS---SRSDVWSYGVTMWEALS 534
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 88/200 (44%), Gaps = 16/200 (8%)
Query: 525 DFGTAYQGFLDNHQY---VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTE 581
+FG+ QG + V +K L A E Q + +L + +V+L G C
Sbjct: 348 NFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA 407
Query: 582 QGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVI 641
+ MLV+ + + L L I S + ++ ++ + YL E+ +
Sbjct: 408 EALMLVM-EMAGGGPLHKFLVGKREEIPVSNVA-----ELLHQVSMGMKYLEEK---NFV 458
Query: 642 HRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESG 701
HRN+ + + L ++ F L++ L +D + ++G ++ + +PE I
Sbjct: 459 HRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLK----WYAPECINFR 514
Query: 702 EATSMADVYSFGVVVLEVVT 721
+ +S +DV+S+GV + E ++
Sbjct: 515 KFSSRSDVWSYGVTMWEALS 534
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 96/217 (44%), Gaps = 38/217 (17%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAH----LRHRNLVRL- 173
LG G +G+V++ DG + AVK + R K A +L V +H VRL
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVK-RSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLE 123
Query: 174 RGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEA-AAPLNWEQRKKIIRGLAAALHYLH 232
+ W E +L + + SL ++ EA A L Q +R AL +LH
Sbjct: 124 QAW--EEGGILYLQTELCGPSLQ-------QHCEAWGASLPEAQVWGYLRDTLLALAHLH 174
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETT 292
Q ++H DVK +N+ L + +LGDFGL ++ T+ A Q
Sbjct: 175 SQ---GLVHLDVKPANIFLGPRGRCKLGDFGLL--------VELGTAGAGEVQ------- 216
Query: 293 RIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVV 329
G Y+ PE Q GS TA +DVFS G+ +LEV
Sbjct: 217 --EGDPRYMAPELLQ-GSYGTA-ADVFSLGLTILEVA 249
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 111/255 (43%), Gaps = 46/255 (18%)
Query: 500 PREISFKEIISAT------------NNFSES-QRVAEMDFGTAYQGFL-----DNHQYVL 541
PR +SF+ S T + F +S QR++ + G+ + F D Y +
Sbjct: 28 PRRVSFRGEASETLQSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAV 87
Query: 542 VKRLGMSKCPALRTRFSNELQNLARL-RHRNLVQL-CGWCTEQGEMLVIYDYSATRILSH 599
+ + + P R R E+ + ++ +H V+L W E+G +L Y T +
Sbjct: 88 KRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAW--EEGGIL----YLQTELCGP 141
Query: 600 LLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPR 659
L + G S+ + + ++ A+ +LH ++ ++H ++ + I L P +
Sbjct: 142 SLQQHCEAWGASLPE-AQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCK 197
Query: 660 LGSFALAEFLTRNDHGHRKATSGNRSVR-GIFGYMSPEYIESGEATSMADVYSFGVVVLE 718
LG F L L T+G V+ G YM+PE ++ T+ ADV+S G+ +LE
Sbjct: 198 LGDFGLLVEL---------GTAGAGEVQEGDPRYMAPELLQGSYGTA-ADVFSLGLTILE 247
Query: 719 VVTGQMAVDFRLPEG 733
V A + LP G
Sbjct: 248 V-----ACNMELPHG 257
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 19/199 (9%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVR 172
+D E LGSG FG V+R V + G V K + + T E+ + L H L+
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLIN 112
Query: 173 LRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
L + +++L+ +++ L + + A +N+ +R L ++H
Sbjct: 113 LHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINY------MRQACEGLKHMH 166
Query: 233 EQLETQIIHRDVKTSNVMLDSQY--NARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
E I+H D+K N+M +++ + ++ DFGLA L + ++ T++A + +
Sbjct: 167 EH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVD 223
Query: 291 TTRIG--------GTIGYL 301
+G G +GY+
Sbjct: 224 REPVGFYTDMWAIGVLGYV 242
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 96/240 (40%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L++ + K EL + H++H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 102 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 149
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 150 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 191
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 192 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 247
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 79 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 135
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 136 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 191
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG-----------Q 723
AT R+ + +M D++S G ++ E++TG Q
Sbjct: 192 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 243
Query: 724 MAVDFRL---PEGLLVKRVHEFEAR 745
+ + RL P L+K++ AR
Sbjct: 244 LKLILRLVGTPGAELLKKISSESAR 268
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 95/228 (41%), Gaps = 41/228 (17%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHRNLVRL 173
VLG G FGKV A + A+K L + + + E T + V + L +L
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 174 RGWCVHEDQLLLVYDYMPNRSLDRVL-----FRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
D+L V +Y+ L + F+ P+ + AA ++ L
Sbjct: 86 HSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAA------------EISIGL 133
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
+LH++ II+RD+K NVMLDS+ + ++ DFG+ + H
Sbjct: 134 FFLHKR---GIIYRDLKLDNVMLDSEGHIKIADFGM----------------CKEHMMDG 174
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
T GT Y+ PE + D +++G+++ E+++G+ D
Sbjct: 175 VTTREFCGTPDYIAPEIIAYQPYGKS-VDWWAYGVLLYEMLAGQPPFD 221
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
++ + +LH+ +I+R++ + LD + G +A+F +H T+ R
Sbjct: 129 ISIGLFFLHKRG---IIYRDLKLDNVMLDSE-----GHIKIADFGMCKEHMMDGVTT--R 178
Query: 685 SVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVD 727
G Y++PE I D +++GV++ E++ GQ D
Sbjct: 179 EFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 95 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 142
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 143 LKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM--------------- 184
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 185 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 72 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 128
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 129 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARH-TDDEM 184
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG-----------Q 723
AT R+ + +M D++S G ++ E++TG Q
Sbjct: 185 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 236
Query: 724 MAVDFRL---PEGLLVKRVHEFEAR 745
+ + RL P L+K++ AR
Sbjct: 237 LKLILRLVGTPGAELLKKISSESAR 261
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 113/281 (40%), Gaps = 46/281 (16%)
Query: 108 IGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELV---AVAH 164
+ N F+ ++LG G FGKV + G A+K L ++ + A L + +
Sbjct: 5 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 64
Query: 165 LRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGL 224
RH L L+ D+L V +Y L L R E A + +
Sbjct: 65 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE-------I 117
Query: 225 AAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNH 284
+AL YLH E +++RD+K N+MLD + ++ DFGL + ++
Sbjct: 118 VSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK------------EGIKDG 163
Query: 285 QFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDD-- 342
A GT YL PE + A D + G+V+ E++ GR Y D
Sbjct: 164 ----ATMKXFCGTPEYLAPEVLEDNDYGRA-VDWWGLGVVMYEMMCGRLPF---YNQDHE 215
Query: 343 ---QIILLDWI---RRLSDEGKVLQAG------DNRLSDGS 371
++IL++ I R L E K L +G RL GS
Sbjct: 216 KLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGS 256
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ SA+ YLH E N V++R++ + LD D + ++ F L + G + + +
Sbjct: 117 IVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK------EGIKDGAT-MK 167
Query: 685 SVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQM 724
G Y++PE +E + D + GVV+ E++ G++
Sbjct: 168 XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 207
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 100/226 (44%), Gaps = 34/226 (15%)
Query: 113 FDEDEVLGSGGFGKVY---RAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHL 165
F+ VLG GG+GKV+ + + G + A+K L + + + AE + +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 166 RHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLA 225
+H +V L +L L+ +Y+ L L R +E A + ++
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAE-------IS 131
Query: 226 AALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQ 285
AL +LH++ II+RD+K N+ML+ Q + +L DFGL + H+ H
Sbjct: 132 MALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD--------GTVTHT 180
Query: 286 FHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
F GTI Y+ PE + A D +S G ++ ++++G
Sbjct: 181 F--------CGTIEYMAPEILMRSGHNRA-VDWWSLGALMYDMLTG 217
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 31/223 (13%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELV----AVAH-LRHRNLV 171
EV+G G F V R + G AVK + + E + ++ H L+H ++V
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
L + L +V+++M L + +R + A + +R + AL Y
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRAD---AGFVYSEAVASHYMRQILEALRYC 146
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNA---RLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
H+ IIHRDVK NV+L S+ N+ +LGDFG+A Q+ S L
Sbjct: 147 HD---NNIIHRDVKPENVLLASKENSAPVKLGDFGVA--------IQLGESG-------L 188
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
R+ GT ++ PE ++ DV+ G+++ ++SG
Sbjct: 189 VAGGRV-GTPHFMAPEVVKREPYGKP-VDVWGCGVILFILLSG 229
Score = 33.1 bits (74), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 84/203 (41%), Gaps = 21/203 (10%)
Query: 541 LVKRLGMSKCPALRTR-FSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY-SATRILS 598
+V + P L T E L+H ++V+L + G + +++++ +
Sbjct: 56 IVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCF 115
Query: 599 HLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNP 658
++ + +S H ++ + A+ Y H + +IHR++ + L N
Sbjct: 116 EIVKRADAGFVYSEAVASH---YMRQILEALRYCH---DNNIIHRDVKPENVLLASKENS 169
Query: 659 ---RLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVV 715
+LG F +A L G +G R G +M+PE ++ DV+ GV+
Sbjct: 170 APVKLGDFGVAIQL-----GESGLVAGGRV--GTPHFMAPEVVKREPYGKPVDVWGCGVI 222
Query: 716 VLEVVTGQM---AVDFRLPEGLL 735
+ +++G + RL EG++
Sbjct: 223 LFILLSGCLPFYGTKERLFEGII 245
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 100/226 (44%), Gaps = 34/226 (15%)
Query: 113 FDEDEVLGSGGFGKVY---RAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHL 165
F+ VLG GG+GKV+ + + G + A+K L + + + AE + +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 166 RHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLA 225
+H +V L +L L+ +Y+ L L R +E A + ++
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAE-------IS 131
Query: 226 AALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQ 285
AL +LH++ II+RD+K N+ML+ Q + +L DFGL + H+ H
Sbjct: 132 MALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD--------GTVTHX 180
Query: 286 FHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
F GTI Y+ PE + A D +S G ++ ++++G
Sbjct: 181 F--------CGTIEYMAPEILMRSGHNRA-VDWWSLGALMYDMLTG 217
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 98/224 (43%), Gaps = 34/224 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLV 171
+D +VLG+G F +V A +VA+KC+A++ E E + E+ + ++H N+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSL-DRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
L L L+ + L DR++ + A+ ++I + A+ Y
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS--------RLIFQVLDAVKY 131
Query: 231 LHEQLETQIIHRDVKTSNVM---LDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
LH + I+HRD+K N++ LD + DFGL++ M +
Sbjct: 132 LH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK---------MEDPGSV----- 174
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
+ GT GY+ PE + + A D +S G++ ++ G
Sbjct: 175 ---LSTACGTPGYVAPEVLAQKPYSKA-VDCWSIGVIAYILLCG 214
Score = 36.2 bits (82), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 87/220 (39%), Gaps = 33/220 (15%)
Query: 536 NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY-SAT 594
+ V +K + NE+ L +++H N+V L G + +I S
Sbjct: 42 TQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGG 101
Query: 595 RILSHLL---FHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAI- 650
+ ++ F+ I Q + A+ YLH + ++HR++ +
Sbjct: 102 ELFDRIVEKGFYTERDASRLIFQ----------VLDAVKYLH---DLGIVHRDLKPENLL 148
Query: 651 --TLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMAD 708
+LD D + F L++ D G +T+ G GY++PE + + D
Sbjct: 149 YYSLDEDSKIMISDFGLSKM---EDPGSVLSTAC-----GTPGYVAPEVLAQKPYSKAVD 200
Query: 709 VYSFGVVVLEVVTGQMAV----DFRLPEGLLVKRVHEFEA 744
+S GV+ ++ G D +L E +L K +EF++
Sbjct: 201 CWSIGVIAYILLCGYPPFYDENDAKLFEQIL-KAEYEFDS 239
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 96 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 143
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 144 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 185
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 186 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 73 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 129
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 130 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 185
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
AT R+ + +M D++S G ++ E++TG+
Sbjct: 186 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGR 226
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 113/281 (40%), Gaps = 46/281 (16%)
Query: 108 IGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELV---AVAH 164
+ N F+ ++LG G FGKV + G A+K L ++ + A L + +
Sbjct: 145 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 204
Query: 165 LRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGL 224
RH L L+ D+L V +Y L L R E A + +
Sbjct: 205 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE-------I 257
Query: 225 AAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNH 284
+AL YLH E +++RD+K N+MLD + ++ DFGL + ++
Sbjct: 258 VSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK------------EGIKDG 303
Query: 285 QFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDD-- 342
A GT YL PE + A D + G+V+ E++ GR Y D
Sbjct: 304 ----ATMKTFCGTPEYLAPEVLEDNDYGRA-VDWWGLGVVMYEMMCGRLPF---YNQDHE 355
Query: 343 ---QIILLDWI---RRLSDEGKVLQAG------DNRLSDGS 371
++IL++ I R L E K L +G RL GS
Sbjct: 356 KLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGS 396
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ SA+ YLH E N V++R++ + LD D + ++ F L + G + + +
Sbjct: 257 IVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK------EGIKDGAT-MK 307
Query: 685 SVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQM 724
+ G Y++PE +E + D + GVV+ E++ G++
Sbjct: 308 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 347
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 113/281 (40%), Gaps = 46/281 (16%)
Query: 108 IGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELV---AVAH 164
+ N F+ ++LG G FGKV + G A+K L ++ + A L + +
Sbjct: 148 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 207
Query: 165 LRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGL 224
RH L L+ D+L V +Y L L R E A + +
Sbjct: 208 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE-------I 260
Query: 225 AAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNH 284
+AL YLH E +++RD+K N+MLD + ++ DFGL + ++
Sbjct: 261 VSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK------------EGIKDG 306
Query: 285 QFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDD-- 342
A GT YL PE + A D + G+V+ E++ GR Y D
Sbjct: 307 ----ATMKTFCGTPEYLAPEVLEDNDYGRA-VDWWGLGVVMYEMMCGRLPF---YNQDHE 358
Query: 343 ---QIILLDWI---RRLSDEGKVLQAG------DNRLSDGS 371
++IL++ I R L E K L +G RL GS
Sbjct: 359 KLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGS 399
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ SA+ YLH E N V++R++ + LD D + ++ F L + G + + +
Sbjct: 260 IVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK------EGIKDGAT-MK 310
Query: 685 SVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQM 724
+ G Y++PE +E + D + GVV+ E++ G++
Sbjct: 311 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 350
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 96 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 143
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 144 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 185
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 186 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 73 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 129
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 130 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 185
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
AT R+ + +M D++S G ++ E++TG+
Sbjct: 186 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGR 226
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 95 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 142
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 143 LKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM--------------- 184
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 185 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 72 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 128
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 129 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARH-TDDEM 184
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
AT R+ + +M D++S G ++ E++TG+
Sbjct: 185 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGR 225
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 113/281 (40%), Gaps = 46/281 (16%)
Query: 108 IGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELV---AVAH 164
+ N F+ ++LG G FGKV + G A+K L ++ + A L + +
Sbjct: 6 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 65
Query: 165 LRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGL 224
RH L L+ D+L V +Y L L R E A + +
Sbjct: 66 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE-------I 118
Query: 225 AAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNH 284
+AL YLH E +++RD+K N+MLD + ++ DFGL + ++
Sbjct: 119 VSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK------------EGIKDG 164
Query: 285 QFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDD-- 342
A GT YL PE + A D + G+V+ E++ GR Y D
Sbjct: 165 ----ATMKXFCGTPEYLAPEVLEDNDYGRA-VDWWGLGVVMYEMMCGRLPF---YNQDHE 216
Query: 343 ---QIILLDWI---RRLSDEGKVLQAG------DNRLSDGS 371
++IL++ I R L E K L +G RL GS
Sbjct: 217 KLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGS 257
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ SA+ YLH E N V++R++ + LD D + ++ F L + G + + +
Sbjct: 118 IVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK------EGIKDGAT-MK 168
Query: 685 SVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQM 724
G Y++PE +E + D + GVV+ E++ G++
Sbjct: 169 XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 208
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 96 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 143
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 144 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 185
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 186 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 73 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 129
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 130 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 185
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
AT R+ + +M D++S G ++ E++TG+
Sbjct: 186 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGR 226
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 101 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 148
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 149 LKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM--------------- 190
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 191 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 246
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 78 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 134
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 135 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARH-TDDEM 190
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG-----------Q 723
AT R+ + +M D++S G ++ E++TG Q
Sbjct: 191 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 242
Query: 724 MAVDFRL---PEGLLVKRVHEFEAR 745
+ + RL P L+K++ AR
Sbjct: 243 LKLILRLVGTPGAELLKKISSESAR 267
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 96 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 143
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 144 LKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEM--------------- 185
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 186 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 73 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 129
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 130 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARH-TDDEM 185
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
AT R+ + +M D++S G ++ E++TG+
Sbjct: 186 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGR 226
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 113/281 (40%), Gaps = 46/281 (16%)
Query: 108 IGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELV---AVAH 164
+ N F+ ++LG G FGKV + G A+K L ++ + A L + +
Sbjct: 7 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 66
Query: 165 LRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGL 224
RH L L+ D+L V +Y L L R E A + +
Sbjct: 67 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE-------I 119
Query: 225 AAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNH 284
+AL YLH E +++RD+K N+MLD + ++ DFGL + ++
Sbjct: 120 VSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK------------EGIKDG 165
Query: 285 QFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDD-- 342
A GT YL PE + A D + G+V+ E++ GR Y D
Sbjct: 166 ----ATMKXFCGTPEYLAPEVLEDNDYGRA-VDWWGLGVVMYEMMCGRLPF---YNQDHE 217
Query: 343 ---QIILLDWI---RRLSDEGKVLQAG------DNRLSDGS 371
++IL++ I R L E K L +G RL GS
Sbjct: 218 KLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGS 258
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ SA+ YLH E N V++R++ + LD D + ++ F L + G + + +
Sbjct: 119 IVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK------EGIKDGAT-MK 169
Query: 685 SVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQM 724
G Y++PE +E + D + GVV+ E++ G++
Sbjct: 170 XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 209
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 98/224 (43%), Gaps = 34/224 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLV 171
+D +VLG+G F +V A +VA+KC+A++ E E + E+ + ++H N+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSL-DRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
L L L+ + L DR++ + A+ ++I + A+ Y
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS--------RLIFQVLDAVKY 131
Query: 231 LHEQLETQIIHRDVKTSNVM---LDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
LH + I+HRD+K N++ LD + DFGL++ M +
Sbjct: 132 LH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK---------MEDPGSV----- 174
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
+ GT GY+ PE + + A D +S G++ ++ G
Sbjct: 175 ---LSTACGTPGYVAPEVLAQKPYSKA-VDCWSIGVIAYILLCG 214
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 88/220 (40%), Gaps = 33/220 (15%)
Query: 536 NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEM-LVIYDYSAT 594
+ V +K + NE+ L +++H N+V L G + L++ S
Sbjct: 42 TQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGG 101
Query: 595 RILSHLL---FHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAI- 650
+ ++ F+ I Q + A+ YLH + ++HR++ +
Sbjct: 102 ELFDRIVEKGFYTERDASRLIFQ----------VLDAVKYLH---DLGIVHRDLKPENLL 148
Query: 651 --TLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMAD 708
+LD D + F L++ D G +T+ G GY++PE + + D
Sbjct: 149 YYSLDEDSKIMISDFGLSKM---EDPGSVLSTAC-----GTPGYVAPEVLAQKPYSKAVD 200
Query: 709 VYSFGVVVLEVVTGQMAV----DFRLPEGLLVKRVHEFEA 744
+S GV+ ++ G D +L E +L K +EF++
Sbjct: 201 CWSIGVIAYILLCGYPPFYDENDAKLFEQIL-KAEYEFDS 239
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 179
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 180 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 124 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 179
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
AT R+ + +M D++S G ++ E++TG+
Sbjct: 180 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 179
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 180 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 124 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 179
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
AT R+ + +M D++S G ++ E++TG+
Sbjct: 180 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 179
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 180 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 124 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 179
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG-----------Q 723
AT R+ + +M D++S G ++ E++TG Q
Sbjct: 180 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
Query: 724 MAVDFRL---PEGLLVKRVHEFEAR 745
+ + RL P L+K++ AR
Sbjct: 232 LKLILRLVGTPGAELLKKISSESAR 256
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 179
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 180 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 124 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 179
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
AT R+ + +M D++S G ++ E++TG+
Sbjct: 180 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 29/223 (13%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLR-HRNLVRLRGW 176
VL GGF VY A G A+K L E + E+ + L H N+V+
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSA 94
Query: 177 C--------VHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
+ + LL+ + + ++ + + +E+ PL+ + KI A+
Sbjct: 95 ASIGKEESDTGQAEFLLLTELCKGQLVEFL-----KKMESRGPLSCDTVLKIFYQTCRAV 149
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
++H Q + IIHRD+K N++L +Q +L DFG A + H Y + SA+
Sbjct: 150 QHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDY---SWSAQRRALVE 205
Query: 289 AETTRIGGTIGYLPPE------SFQKGSVATAKSDVFSFGIVV 325
E TR T Y PE +F G K D+++ G ++
Sbjct: 206 EEITR-NTTPMYRTPEIIDLYSNFPIGE----KQDIWALGCIL 243
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 179
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 180 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 124 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 179
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG-----------Q 723
AT R+ + +M D++S G ++ E++TG Q
Sbjct: 180 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
Query: 724 MAVDFRL---PEGLLVKRVHEFEAR 745
+ + RL P L+K++ AR
Sbjct: 232 LKLILRLVGTPGAELLKKISSESAR 256
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 95 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 142
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 143 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 184
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 185 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 72 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 128
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 129 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 184
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG-----------Q 723
AT R+ + +M D++S G ++ E++TG Q
Sbjct: 185 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 236
Query: 724 MAVDFRL---PEGLLVKRVHEFEAR 745
+ + RL P L+K++ AR
Sbjct: 237 LKLILRLVGTPGAELLKKISSESAR 261
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 101 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 148
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 149 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 190
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 191 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 246
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 78 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 134
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 135 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 190
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG-----------Q 723
AT R+ + +M D++S G ++ E++TG Q
Sbjct: 191 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 242
Query: 724 MAVDFRL---PEGLLVKRVHEFEAR 745
+ + RL P L+K++ AR
Sbjct: 243 LKLILRLVGTPGAELLKKISSESAR 267
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 89 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 136
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 137 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 178
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 179 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 234
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 66 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 122
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 123 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 178
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG-----------Q 723
AT R+ + +M D++S G ++ E++TG Q
Sbjct: 179 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 230
Query: 724 MAVDFRL---PEGLLVKRVHEFEAR 745
+ + RL P L+K++ AR
Sbjct: 231 LKLILRLVGTPGAELLKKISSESAR 255
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 113 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 160
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 161 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 202
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 203 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 258
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 90 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 146
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 147 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 202
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG-----------Q 723
AT R+ + +M D++S G ++ E++TG Q
Sbjct: 203 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 254
Query: 724 MAVDFRL---PEGLLVKRVHEFEAR 745
+ + RL P L+K++ AR
Sbjct: 255 LKLILRLVGTPGAELLKKISSESAR 279
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 102 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 149
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 150 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 191
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 192 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 247
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 79 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 135
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 136 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 191
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG-----------Q 723
AT R+ + +M D++S G ++ E++TG Q
Sbjct: 192 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 243
Query: 724 MAVDFRL---PEGLLVKRVHEFEAR 745
+ + RL P L+K++ AR
Sbjct: 244 LKLILRLVGTPGAELLKKISSESAR 268
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 102 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 149
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 150 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 191
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 192 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 247
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 79 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 135
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 136 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 191
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG-----------Q 723
AT R+ + +M D++S G ++ E++TG Q
Sbjct: 192 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 243
Query: 724 MAVDFRL---PEGLLVKRVHEFEAR 745
+ + RL P L+K++ AR
Sbjct: 244 LKLILRLVGTPGAELLKKISSESAR 268
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 92 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 139
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 140 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 181
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 182 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 69 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 125
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 126 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 181
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG-----------Q 723
AT R+ + +M D++S G ++ E++TG Q
Sbjct: 182 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 233
Query: 724 MAVDFRL---PEGLLVKRVHEFEAR 745
+ + RL P L+K++ AR
Sbjct: 234 LKLILRLVGTPGAELLKKISSESAR 258
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 110 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 158 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 199
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 200 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 255
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 87 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 143
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 144 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 199
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG-----------Q 723
AT R+ + +M D++S G ++ E++TG Q
Sbjct: 200 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 251
Query: 724 MAVDFRL---PEGLLVKRVHEFEAR 745
+ + RL P L+K++ AR
Sbjct: 252 LKLILRLVGTPGAELLKKISSESAR 276
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 179
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 180 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 124 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 179
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
AT R+ + +M D++S G ++ E++TG+
Sbjct: 180 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 92 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 139
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 140 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 181
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 182 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 69 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 125
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 126 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 181
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG-----------Q 723
AT R+ + +M D++S G ++ E++TG Q
Sbjct: 182 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 233
Query: 724 MAVDFRL---PEGLLVKRVHEFEAR 745
+ + RL P L+K++ AR
Sbjct: 234 LKLILRLVGTPGAELLKKISSESAR 258
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 95 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 142
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 143 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 184
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 185 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 72 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 128
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 129 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 184
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
AT R+ + +M D++S G ++ E++TG+
Sbjct: 185 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGR 225
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 109 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 156
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 157 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 198
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 199 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 254
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 86 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 142
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 143 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 198
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
AT R+ + +M D++S G ++ E++TG+
Sbjct: 199 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGR 239
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 98/224 (43%), Gaps = 34/224 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLV 171
+D +VLG+G F +V A +VA+KC+A++ E E + E+ + ++H N+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSL-DRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
L L L+ + L DR++ + A+ ++I + A+ Y
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS--------RLIFQVLDAVKY 131
Query: 231 LHEQLETQIIHRDVKTSNVM---LDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
LH + I+HRD+K N++ LD + DFGL++ M +
Sbjct: 132 LH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK---------MEDPGSV----- 174
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
+ GT GY+ PE + + A D +S G++ ++ G
Sbjct: 175 ---LSTACGTPGYVAPEVLAQKPYSKA-VDCWSIGVIAYILLCG 214
Score = 35.8 bits (81), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 87/220 (39%), Gaps = 33/220 (15%)
Query: 536 NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYD-YSAT 594
+ V +K + NE+ L +++H N+V L G + +I S
Sbjct: 42 TQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGG 101
Query: 595 RILSHLL---FHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAI- 650
+ ++ F+ I Q + A+ YLH + ++HR++ +
Sbjct: 102 ELFDRIVEKGFYTERDASRLIFQ----------VLDAVKYLH---DLGIVHRDLKPENLL 148
Query: 651 --TLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMAD 708
+LD D + F L++ D G +T+ G GY++PE + + D
Sbjct: 149 YYSLDEDSKIMISDFGLSKM---EDPGSVLSTAC-----GTPGYVAPEVLAQKPYSKAVD 200
Query: 709 VYSFGVVVLEVVTGQMAV----DFRLPEGLLVKRVHEFEA 744
+S GV+ ++ G D +L E +L K +EF++
Sbjct: 201 CWSIGVIAYILLCGYPPFYDENDAKLFEQIL-KAEYEFDS 239
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 92 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 139
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 140 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 181
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 182 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 69 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 125
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 126 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 181
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG-----------Q 723
AT R+ + +M D++S G ++ E++TG Q
Sbjct: 182 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 233
Query: 724 MAVDFRL---PEGLLVKRVHEFEAR 745
+ + RL P L+K++ AR
Sbjct: 234 LKLILRLVGTPGAELLKKISSESAR 258
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 97 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 145 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 186
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 187 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 74 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 130
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 131 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 186
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
AT R+ + +M D++S G ++ E++TG+
Sbjct: 187 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGR 227
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 92 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 139
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 140 LKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEM--------------- 181
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 182 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 69 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 125
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 126 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARH-TDDEM 181
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG-----------Q 723
AT R+ + +M D++S G ++ E++TG Q
Sbjct: 182 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 233
Query: 724 MAVDFRL---PEGLLVKRVHEFEAR 745
+ + RL P L+K++ AR
Sbjct: 234 LKLILRLVGTPGAELLKKISSESAR 258
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 179
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 180 ----TGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 124 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 179
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG-----------Q 723
AT R+ + +M D++S G ++ E++TG Q
Sbjct: 180 TGXVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
Query: 724 MAVDFRL---PEGLLVKRVHEFEAR 745
+ + RL P L+K++ AR
Sbjct: 232 LKLILRLVGTPGAELLKKISSESAR 256
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 98/223 (43%), Gaps = 30/223 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK---GERFEKTFAAELVAVAHLRHRN 169
F ++LG G F V A + A+K L ++ E E ++ L H
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 170 LVRLRGWCVHEDQ-LLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
V+L +C +D+ L Y N L + + R+ + + + + +AL
Sbjct: 99 FVKLY-FCFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAE------IVSAL 150
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH + IIHRD+K N++L+ + ++ DFG A+ L E + AR + F
Sbjct: 151 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE------SKQARANXF-- 199
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
GT Y+ PE + S A SD+++ G ++ ++V+G
Sbjct: 200 ------VGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAG 235
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ SA+ YLH + +IHR++ I L+ DM+ ++ F A+ L+ K N
Sbjct: 146 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANX 198
Query: 685 SVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
V G Y+SPE + A +D+++ G ++ ++V G
Sbjct: 199 FV-GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 125/298 (41%), Gaps = 61/298 (20%)
Query: 110 SNGFDEDEVLGSGGFGKVYRA-----VLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAH 164
SN F ++ +G G F VY A V P + +A+K L AAEL +
Sbjct: 20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEK--IALKHLIPTSHPIR--IAAELQCLTV 75
Query: 165 LRHRNLVRLRGWCVHE-DQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRG 223
++ V +C + D +++ Y+ + S L+ L++++ ++ +
Sbjct: 76 AGGQDNVMGVKYCFRKNDHVVIAMPYLEHESF----------LDILNSLSFQEVREYMLN 125
Query: 224 LAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLG-----DFGLA-----------RW 267
L AL +H+ I+HRDVK SN + YN RL DFGLA ++
Sbjct: 126 LFKALKRIHQ---FGIVHRDVKPSNFL----YNRRLKKYALVDFGLAQGTHDTKIELLKF 178
Query: 268 LEHELQYQMRTSSARNHQFHLAETTRIG---GTIGYLPPESFQKGSVATAKSDVFSFGIV 324
++ E Q Q R S + L+ ++ GT G+ PE K T D++S G++
Sbjct: 179 VQSEAQ-QERCSQNKC-SICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVI 236
Query: 325 VLEVVSGRRAVDLTYP----DDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDME 378
L ++SGR YP D + L I + + +QA + G LC E
Sbjct: 237 FLSLLSGR------YPFYKASDDLTALAQIMTIRGSRETIQAAK---TFGKSILCSKE 285
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 179
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 180 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 124 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 179
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG-----------Q 723
AT R+ + +M D++S G ++ E++TG Q
Sbjct: 180 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
Query: 724 MAVDFRL---PEGLLVKRVHEFEAR 745
+ + RL P L+K++ AR
Sbjct: 232 LKLILRLVGTPGAELLKKISSESAR 256
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 179
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 180 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 124 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 179
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
AT R+ + +M D++S G ++ E++TG+
Sbjct: 180 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 101/229 (44%), Gaps = 37/229 (16%)
Query: 119 LGSGGFGKVYRA-VLPSDGT----VVAVKCLAEKGERFE-KTFAAELVAVAHL-RHRNLV 171
LG G FG+V A D T VAVK L E E + +EL + H+ H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 172 RLRGWCVHEDQLLLVY----------DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKII 221
L G C L+V Y+ ++ + V ++ PE+L L E
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK-PEDLYKDF-LTLEHLIXYS 154
Query: 222 RGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSA 281
+A + +L + + IHRD+ N++L + ++ DFGLAR + + +R A
Sbjct: 155 FQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD-XVRKGDA 210
Query: 282 RNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
R + ++ PE+ V T +SDV+SFG+++ E+ S
Sbjct: 211 RL-------------PLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFS 245
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 70/162 (43%), Gaps = 17/162 (10%)
Query: 569 HRNLVQLCGWCTEQG-EMLVIYDYSATRILSHLL--------FHNNHRIGHSILQWHHRY 619
H N+V L G CT+ G ++VI ++ LS L + + L H
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLI 151
Query: 620 NIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKA 679
+A + +L + + IHR++ + I L ++ F LA + ++ RK
Sbjct: 152 XYSFQVAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 680 TSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
+ R +M+PE I T +DV+SFGV++ E+ +
Sbjct: 209 DA-----RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRG 137
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM--------------- 179
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 180 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Score = 36.2 bits (82), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKXQKLT 123
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 124 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARH-TDDEM 179
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
AT R+ + +M D++S G ++ E++TG+
Sbjct: 180 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 110 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 158 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 199
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 200 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 255
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 87 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 143
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 144 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 199
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
AT R+ + +M D++S G ++ E++TG+
Sbjct: 200 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGR 240
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 18/108 (16%)
Query: 224 LAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARN 283
+ +AL YLH + IIHRD+K N++L+ + ++ DFG A+ L E + AR
Sbjct: 141 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE------SKQARA 191
Query: 284 HQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
+ F GT Y+ PE + S A+ SD+++ G ++ ++V+G
Sbjct: 192 NSF--------VGTAQYVSPELLTEKS-ASKSSDLWALGCIIYQLVAG 230
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ SA+ YLH + +IHR++ I L+ DM+ ++ F A+ L+ R
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA-----N 192
Query: 685 SVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
S G Y+SPE + A+ +D+++ G ++ ++V G
Sbjct: 193 SFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 102/225 (45%), Gaps = 32/225 (14%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAEL-VAVAHLRHRNLVRLRGW 176
LG G +G V + G ++AVK + A + +K +L +++ + V G
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 177 CVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLE 236
E + + + M + SLD+ F + + ++ + + KI + AL +LH +L
Sbjct: 75 LFREGDVWICMELM-DTSLDK--FYK-QVIDKGQTIPEDILGKIAVSIVKALEHLHSKL- 129
Query: 237 TQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGG 296
+IHRDVK SNV++++ ++ DFG++ +L ++ + G
Sbjct: 130 -SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID-----------------AG 171
Query: 297 TIGYLPPESF-----QKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
Y+ PE QKG + KSD++S GI ++E+ R D
Sbjct: 172 CKPYMAPERINPELNQKG--YSVKSDIWSLGITMIELAILRFPYD 214
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 87 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 134
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 135 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 176
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 177 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 232
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 64 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 120
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 121 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 176
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
AT R+ + +M D++S G ++ E++TG+
Sbjct: 177 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGR 217
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 88 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 135
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 136 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 177
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 178 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 233
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 65 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 121
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 122 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 177
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
AT R+ + +M D++S G ++ E++TG+
Sbjct: 178 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGR 218
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 87 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 134
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 135 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 176
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 177 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 232
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 64 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 120
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 121 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 176
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
AT R+ + +M D++S G ++ E++TG+
Sbjct: 177 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGR 217
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 103/240 (42%), Gaps = 44/240 (18%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKC-----LAEKGERFEKT-FAAELVAVAHLR--HRN 169
+LGSGGFG VY + SD VA+K +++ GE T E+V + +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 170 LVRLRGWCVHEDQLLLVYDYM-PNRSL-DRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
++RL W D +L+ + M P + L D + R E A W+ + A
Sbjct: 75 VIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQ--------VLEA 126
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLD-SQYNARLGDFGLARWLEHELQYQMRTSSARNHQF 286
+ + H ++HRD+K N+++D ++ +L DFG L+ +
Sbjct: 127 VRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-------------- 169
Query: 287 HLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346
T GT Y PPE + + V+S GI++ ++V G D+ + D+ I+
Sbjct: 170 ----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII 221
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 100 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 147
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 148 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 189
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 190 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 245
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 77 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 133
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 134 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 189
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
AT R+ + +M D++S G ++ E++TG+
Sbjct: 190 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGR 230
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 86 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 133
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 134 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 175
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 176 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 63 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 119
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 120 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 175
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
AT R+ + +M D++S G ++ E++TG+
Sbjct: 176 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGR 216
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRG 137
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 179
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 180 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Score = 35.8 bits (81), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKXQKLT 123
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 124 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 179
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
AT R+ + +M D++S G ++ E++TG+
Sbjct: 180 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 109 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 156
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 157 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 198
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 199 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 254
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 86 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 142
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 143 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 198
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
AT R+ + +M D++S G ++ E++TG+
Sbjct: 199 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGR 239
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 89/220 (40%), Gaps = 32/220 (14%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK--GERFEKTFAAELVAVAHLRHRNLVRLR 174
E LG G F V R V + A K + K R + E L+H N+VRL
Sbjct: 37 EELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 96
Query: 175 GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQ 234
E LV+D + L + R EA A I + +++++H+
Sbjct: 97 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADA-------SHCIHQILESVNHIHQH 149
Query: 235 LETQIIHRDVKTSNVMLDSQYNA---RLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
I+HRD+K N++L S+ +L DFGLA ++ E Q
Sbjct: 150 ---DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWF--------------- 191
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
GT GYL PE +K D+++ G+++ ++ G
Sbjct: 192 -GFAGTPGYLSPEVLRKDPYGKP-VDIWACGVILYILLVG 229
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 79/179 (44%), Gaps = 27/179 (15%)
Query: 553 LRTRFSNELQNLAR----LRHRNLVQLCGWCTEQGEMLVIYD-YSATRILSHLL---FHN 604
L R +L+ AR L+H N+V+L +E+G +++D + + ++ +++
Sbjct: 69 LSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS 128
Query: 605 NHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFA 664
H I Q + ++ ++H+ ++HR++ + L + +
Sbjct: 129 EADASHCIHQ----------ILESVNHIHQH---DIVHRDLKPENLLLASKC--KGAAVK 173
Query: 665 LAEF-LTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
LA+F L G ++A G G GY+SPE + D+++ GV++ ++ G
Sbjct: 174 LADFGLAIEVQGEQQAWFG---FAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 95/241 (39%), Gaps = 47/241 (19%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 97 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR H
Sbjct: 145 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--------------------H 181
Query: 288 LA-ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346
A E T T Y PE D++S G ++ E+++GR T DQ+ L
Sbjct: 182 TADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 241
Query: 347 L 347
+
Sbjct: 242 I 242
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 87/205 (42%), Gaps = 30/205 (14%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 74 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 130
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA
Sbjct: 131 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT 187
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG-----------Q 723
G+ AT R+ + +M D++S G ++ E++TG Q
Sbjct: 188 GY-VATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 238
Query: 724 MAVDFRL---PEGLLVKRVHEFEAR 745
+ + RL P L+K++ AR
Sbjct: 239 LKLILRLVGTPGAELLKKISSESAR 263
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 96/222 (43%), Gaps = 28/222 (12%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK---GERFEKTFAAELVAVAHLRHRN 169
F ++LG G F V A + A+K L ++ E E ++ L H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
V+L +++L Y N L + + R+ + + + + +AL
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAE------IVSALE 143
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
YLH + IIHRD+K N++L+ + ++ DFG A+ L E + AR + F
Sbjct: 144 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE------SKQARANSF--- 191
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
GT Y+ PE + S A SD+++ G ++ ++V+G
Sbjct: 192 -----VGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAG 227
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ SA+ YLH + +IHR++ I L+ DM+ ++ F A+ L+ R
Sbjct: 138 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA-----N 189
Query: 685 SVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
S G Y+SPE + A +D+++ G ++ ++V G
Sbjct: 190 SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 95/241 (39%), Gaps = 47/241 (19%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 97 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR H
Sbjct: 145 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--------------------H 181
Query: 288 LA-ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346
A E T T Y PE D++S G ++ E+++GR T DQ+ L
Sbjct: 182 TADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 241
Query: 347 L 347
+
Sbjct: 242 I 242
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 74 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 130
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 131 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TADEM 186
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG-----------Q 723
AT R+ + +M D++S G ++ E++TG Q
Sbjct: 187 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 238
Query: 724 MAVDFRL---PEGLLVKRVHEFEAR 745
+ + RL P L+K++ AR
Sbjct: 239 LKLILRLVGTPGAELLKKISSESAR 263
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 86 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 133
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 134 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 175
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 176 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 63 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 119
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 120 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 175
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
AT R+ + +M D++S G ++ E++TG+
Sbjct: 176 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGR 216
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 18/108 (16%)
Query: 224 LAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARN 283
+ +AL YLH + IIHRD+K N++L+ + ++ DFG A+ L E + AR
Sbjct: 119 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE------SKQARA 169
Query: 284 HQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
+ F GT Y+ PE + S A SD+++ G ++ ++V+G
Sbjct: 170 NXF--------VGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAG 208
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ SA+ YLH + +IHR++ I L+ DM+ ++ F A+ L+ K N
Sbjct: 119 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANX 171
Query: 685 SVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
V G Y+SPE + A +D+++ G ++ ++V G
Sbjct: 172 FV-GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 96/222 (43%), Gaps = 28/222 (12%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK---GERFEKTFAAELVAVAHLRHRN 169
F ++LG G F V A + A+K L ++ E E ++ L H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
V+L +++L Y N L + + R+ + + + + +AL
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAE------IVSALE 143
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
YLH + IIHRD+K N++L+ + ++ DFG A+ L E + AR + F
Sbjct: 144 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE------SKQARANXF--- 191
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
GT Y+ PE + S A SD+++ G ++ ++V+G
Sbjct: 192 -----VGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAG 227
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ SA+ YLH + +IHR++ I L+ DM+ ++ F A+ L+ K N
Sbjct: 138 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANX 190
Query: 685 SVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
V G Y+SPE + A +D+++ G ++ ++V G
Sbjct: 191 FV-GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 95/241 (39%), Gaps = 47/241 (19%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 97 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR H
Sbjct: 145 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--------------------H 181
Query: 288 LA-ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346
A E T T Y PE D++S G ++ E+++GR T DQ+ L
Sbjct: 182 TADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 241
Query: 347 L 347
+
Sbjct: 242 I 242
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 87/205 (42%), Gaps = 30/205 (14%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 74 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 130
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA
Sbjct: 131 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT 187
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG-----------Q 723
G+ AT R+ + +M D++S G ++ E++TG Q
Sbjct: 188 GY-VATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 238
Query: 724 MAVDFRL---PEGLLVKRVHEFEAR 745
+ + RL P L+K++ AR
Sbjct: 239 LKLILRLVGTPGAELLKKISSESAR 263
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 18/108 (16%)
Query: 224 LAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARN 283
+ +AL YLH + IIHRD+K N++L+ + ++ DFG A+ L E + AR
Sbjct: 116 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE------SKQARA 166
Query: 284 HQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
+ F GT Y+ PE + S A SD+++ G ++ ++V+G
Sbjct: 167 NXF--------VGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAG 205
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ SA+ YLH + +IHR++ I L+ DM+ ++ F A+ L+ K N
Sbjct: 116 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANX 168
Query: 685 SVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
V G Y+SPE + A +D+++ G ++ ++V G
Sbjct: 169 FV-GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 96/222 (43%), Gaps = 28/222 (12%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK---GERFEKTFAAELVAVAHLRHRN 169
F ++LG G F V A + A+K L ++ E E ++ L H
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
V+L +++L Y N L + + R+ + + + + +AL
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAE------IVSALE 128
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
YLH + IIHRD+K N++L+ + ++ DFG A+ L E + AR + F
Sbjct: 129 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE------SKQARANXF--- 176
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
GT Y+ PE + S A SD+++ G ++ ++V+G
Sbjct: 177 -----VGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAG 212
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ SA+ YLH + +IHR++ I L+ DM+ ++ F A+ L+ K N
Sbjct: 123 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANX 175
Query: 685 SVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
V G Y+SPE + A +D+++ G ++ ++V G
Sbjct: 176 FV-GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 96/225 (42%), Gaps = 26/225 (11%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHL-RHRN 169
F E E +GSG FG V++ V DG + A+K + G E+ E+ A A L +H +
Sbjct: 11 FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSH 70
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
+VR +D +L+ +Y SL + EN + + K ++ + L
Sbjct: 71 VVRYFSAWAEDDHMLIQNEYCNGGSLADAI---SENYRIMSYFKEAELKDLLLQVGRGLR 127
Query: 230 YLHEQLETQIIHRDVKTSNVMLD--SQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
Y+H ++H D+K SN+ + S NA + W +++ +++
Sbjct: 128 YIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGD--------- 175
Query: 288 LAETTRIG------GTIGYLPPESFQKGSVATAKSDVFSFGIVVL 326
L TRI G +L E Q+ K+D+F+ + V+
Sbjct: 176 LGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV 220
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 18/108 (16%)
Query: 224 LAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARN 283
+ +AL YLH + IIHRD+K N++L+ + ++ DFG A+ L E + AR
Sbjct: 118 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE------SKQARA 168
Query: 284 HQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
+ F GT Y+ PE + S A SD+++ G ++ ++V+G
Sbjct: 169 NXF--------VGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAG 207
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ SA+ YLH + +IHR++ I L+ DM+ ++ F A+ L+ K N
Sbjct: 118 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANX 170
Query: 685 SVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
V G Y+SPE + A +D+++ G ++ ++V G
Sbjct: 171 FV-GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 18/108 (16%)
Query: 224 LAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARN 283
+ +AL YLH + IIHRD+K N++L+ + ++ DFG A+ L E + AR
Sbjct: 117 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE------SKQARA 167
Query: 284 HQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
+ F GT Y+ PE + S A SD+++ G ++ ++V+G
Sbjct: 168 NXF--------VGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAG 206
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ SA+ YLH + +IHR++ I L+ DM+ ++ F A+ L+ K N
Sbjct: 117 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANX 169
Query: 685 SVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
V G Y+SPE + A +D+++ G ++ ++V G
Sbjct: 170 FV-GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 95/224 (42%), Gaps = 20/224 (8%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFE--KTFAAELVAVAHLRHRNLVRLRG 175
++G G +G VY A + VA+K + E K E+ + L+ ++RL
Sbjct: 33 LIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYD 92
Query: 176 WCVHEDQLLLVYDYMPNRSLD---RVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
+ +D L Y+ D + LF+ P L E K I+ L +++H
Sbjct: 93 LIIPDDLLKFDELYIVLEIADSDLKKLFKTP------IFLTEEHIKTILYNLLLGENFIH 146
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARN-----HQFH 287
E + IIHRD+K +N +L+ + ++ DFGLAR + E + N H +
Sbjct: 147 E---SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKN 203
Query: 288 L-AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
L + T T Y PE T D++S G + E+++
Sbjct: 204 LKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 96/225 (42%), Gaps = 26/225 (11%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHL-RHRN 169
F E E +GSG FG V++ V DG + A+K + G E+ E+ A A L +H +
Sbjct: 13 FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSH 72
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
+VR +D +L+ +Y SL + EN + + K ++ + L
Sbjct: 73 VVRYFSAWAEDDHMLIQNEYCNGGSLADAI---SENYRIMSYFKEAELKDLLLQVGRGLR 129
Query: 230 YLHEQLETQIIHRDVKTSNVMLD--SQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
Y+H ++H D+K SN+ + S NA + W +++ +++
Sbjct: 130 YIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGD--------- 177
Query: 288 LAETTRIG------GTIGYLPPESFQKGSVATAKSDVFSFGIVVL 326
L TRI G +L E Q+ K+D+F+ + V+
Sbjct: 178 LGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV 222
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 96/225 (42%), Gaps = 26/225 (11%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK--GERFEKTFAAELVAVAHL-RHRN 169
F E E +GSG FG V++ V DG + A+K + G E+ E+ A A L +H +
Sbjct: 9 FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSH 68
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
+VR +D +L+ +Y SL + EN + + K ++ + L
Sbjct: 69 VVRYFSAWAEDDHMLIQNEYCNGGSLADAI---SENYRIMSYFKEAELKDLLLQVGRGLR 125
Query: 230 YLHEQLETQIIHRDVKTSNVMLD--SQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
Y+H ++H D+K SN+ + S NA + W +++ +++
Sbjct: 126 YIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGD--------- 173
Query: 288 LAETTRIG------GTIGYLPPESFQKGSVATAKSDVFSFGIVVL 326
L TRI G +L E Q+ K+D+F+ + V+
Sbjct: 174 LGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV 218
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 88/220 (40%), Gaps = 32/220 (14%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK--GERFEKTFAAELVAVAHLRHRNLVRLR 174
E LG G F V R V G A K + K R + E L+H N+VRL
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 87
Query: 175 GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQ 234
E L++D + L + R EA A I+ + A+ + H
Sbjct: 88 DSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADA-------SHCIQQILEAVLHCH-- 138
Query: 235 LETQIIHRDVKTSNVMLDSQYNA---RLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
+ ++HRD+K N++L S+ +L DFGLA +E E Q
Sbjct: 139 -QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWF--------------- 182
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
GT GYL PE +K D+++ G+++ ++ G
Sbjct: 183 -GFAGTPGYLSPEVLRKDPYGKP-VDLWACGVILYILLVG 220
Score = 36.6 bits (83), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 78/175 (44%), Gaps = 19/175 (10%)
Query: 553 LRTRFSNELQNLAR----LRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRI 608
L R +L+ AR L+H N+V+L +E+G +I+D + LF + +
Sbjct: 60 LSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDL----VTGGELFEDI--V 113
Query: 609 GHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEF 668
+ I+ + A+L+ H+ V+HR++ + L + + + LA+F
Sbjct: 114 AREYYSEADASHCIQQILEAVLHCHQM---GVVHRDLKPENLLLASKL--KGAAVKLADF 168
Query: 669 -LTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
L G ++A G G GY+SPE + D+++ GV++ ++ G
Sbjct: 169 GLAIEVEGEQQAWFG---FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 96/225 (42%), Gaps = 26/225 (11%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHL-RHRN 169
F E E +GSG FG V++ V DG + A+K + G E+ E+ A A L +H +
Sbjct: 11 FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSH 70
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
+VR +D +L+ +Y SL + EN + + K ++ + L
Sbjct: 71 VVRYFSAWAEDDHMLIQNEYCNGGSLADAI---SENYRIMSYFKEAELKDLLLQVGRGLR 127
Query: 230 YLHEQLETQIIHRDVKTSNVMLD--SQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
Y+H ++H D+K SN+ + S NA + W +++ +++
Sbjct: 128 YIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGD--------- 175
Query: 288 LAETTRIG------GTIGYLPPESFQKGSVATAKSDVFSFGIVVL 326
L TRI G +L E Q+ K+D+F+ + V+
Sbjct: 176 LGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV 220
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 18/108 (16%)
Query: 224 LAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARN 283
+ +AL YLH + IIHRD+K N++L+ + ++ DFG A+ L E + AR
Sbjct: 142 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE------SKQARA 192
Query: 284 HQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
+ F GT Y+ PE + S A SD+++ G ++ ++V+G
Sbjct: 193 NSF--------VGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAG 231
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ SA+ YLH + +IHR++ I L+ DM+ ++ F A+ L+ R
Sbjct: 142 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA-----N 193
Query: 685 SVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
S G Y+SPE + A +D+++ G ++ ++V G
Sbjct: 194 SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 18/108 (16%)
Query: 224 LAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARN 283
+ +AL YLH + IIHRD+K N++L+ + ++ DFG A+ L E + AR
Sbjct: 139 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE------SKQARA 189
Query: 284 HQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
+ F GT Y+ PE + S A SD+++ G ++ ++V+G
Sbjct: 190 NXF--------VGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAG 228
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ SA+ YLH + +IHR++ I L+ DM+ ++ F A+ L+ K N
Sbjct: 139 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANX 191
Query: 685 SVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
V G Y+SPE + A +D+++ G ++ ++V G
Sbjct: 192 FV-GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 18/108 (16%)
Query: 224 LAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARN 283
+ +AL YLH + IIHRD+K N++L+ + ++ DFG A+ L E + AR
Sbjct: 139 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE------SKQARA 189
Query: 284 HQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
+ F GT Y+ PE + S A SD+++ G ++ ++V+G
Sbjct: 190 NXF--------VGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAG 228
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ SA+ YLH + +IHR++ I L+ DM+ ++ F A+ L+ K N
Sbjct: 139 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANX 191
Query: 685 SVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
V G Y+SPE + A +D+++ G ++ ++V G
Sbjct: 192 FV-GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 18/108 (16%)
Query: 224 LAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARN 283
+ +AL YLH + IIHRD+K N++L+ + ++ DFG A+ L E + AR
Sbjct: 139 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE------SKQARA 189
Query: 284 HQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
+ F GT Y+ PE + S A SD+++ G ++ ++V+G
Sbjct: 190 NXF--------VGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAG 228
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ SA+ YLH + +IHR++ I L+ DM+ ++ F A+ L+ K N
Sbjct: 139 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANX 191
Query: 685 SVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
V G Y+SPE + A +D+++ G ++ ++V G
Sbjct: 192 FV-GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 117/264 (44%), Gaps = 42/264 (15%)
Query: 119 LGSGGFGKVYRA-VLPSDGT----VVAVKCLAEKGERFE-KTFAAELVAVAHL-RHRNLV 171
LG G FG+V A D T VAVK L E E + +EL + H+ H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 172 RLRGWCVHEDQLLLVYD----------YMPNRSLDRVLFR-RPENLEAAAPLNWEQRKKI 220
L G C L+V Y+ ++ + V ++ PE+L L E
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF-LTLEHLICY 144
Query: 221 IRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSS 280
+A + +L + + IHRD+ N++L + ++ DFGLAR + + +R
Sbjct: 145 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD-XVRKGD 200
Query: 281 ARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
AR + ++ PE+ V T +SDV+SFG+++ E+ S + YP
Sbjct: 201 ARL-------------PLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGAS---PYP 243
Query: 341 DDQIILLDWIRRLSDEGKVLQAGD 364
+I ++ RRL EG ++A D
Sbjct: 244 GVKID-EEFCRRLK-EGTRMRAPD 265
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 13/161 (8%)
Query: 569 HRNLVQLCGWCTEQG-EMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLAS 627
H N+V L G CT+ G ++VI ++ LS L + + Y +L
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 628 AILYLHE-----EW--NEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKAT 680
I Y + E+ + + IHR++ + I L ++ F LA + ++ RK
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 681 SGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
+ R +M+PE I T +DV+SFGV++ E+ +
Sbjct: 201 A-----RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 18/108 (16%)
Query: 224 LAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARN 283
+ +AL YLH + IIHRD+K N++L+ + ++ DFG A+ L E + AR
Sbjct: 141 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE------SKQARA 191
Query: 284 HQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
+ F GT Y+ PE + S A SD+++ G ++ ++V+G
Sbjct: 192 NXF--------VGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAG 230
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ SA+ YLH + +IHR++ I L+ DM+ ++ F A+ L+ K N
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANX 193
Query: 685 SVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
V G Y+SPE + A +D+++ G ++ ++V G
Sbjct: 194 FV-GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ + L + + +I +
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRG 137
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGL R + E+
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEM--------------- 179
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 180 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 87/205 (42%), Gaps = 30/205 (14%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKSQKLT 123
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F L T ++
Sbjct: 124 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCRH-TDDEM 179
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG-----------Q 723
AT R+ + +M D++S G ++ E++TG Q
Sbjct: 180 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
Query: 724 MAVDFRL---PEGLLVKRVHEFEAR 745
+ + RL P L+K++ AR
Sbjct: 232 LKLILRLVGTPGAELLKKISSESAR 256
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 18/108 (16%)
Query: 224 LAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARN 283
+ +AL YLH + IIHRD+K N++L+ + ++ DFG A+ L E + AR
Sbjct: 141 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE------SKQARA 191
Query: 284 HQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
+ F GT Y+ PE + S A SD+++ G ++ ++V+G
Sbjct: 192 NXFV--------GTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAG 230
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ SA+ YLH + +IHR++ I L+ DM+ ++ F A+ L+ K N
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANX 193
Query: 685 SVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLP-EGLLVKRVHEFE 743
V G Y+SPE + A +D+++ G ++ ++V G FR EGL+ ++ + E
Sbjct: 194 FV-GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRAGNEGLIFAKIIKLE 250
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 117/264 (44%), Gaps = 42/264 (15%)
Query: 119 LGSGGFGKVYRA-VLPSDGT----VVAVKCLAEKGERFE-KTFAAELVAVAHL-RHRNLV 171
LG G FG+V A D T VAVK L E E + +EL + H+ H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 172 RLRGWCVHEDQLLLVY----------DYMPNRSLDRVLFR-RPENLEAAAPLNWEQRKKI 220
L G C L+V Y+ ++ + V ++ PE+L L E
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF-LTLEHLICY 144
Query: 221 IRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSS 280
+A + +L + + IHRD+ N++L + ++ DFGLAR + + +R
Sbjct: 145 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD-XVRKGD 200
Query: 281 ARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
AR + ++ PE+ V T +SDV+SFG+++ E+ S + YP
Sbjct: 201 ARL-------------PLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGAS---PYP 243
Query: 341 DDQIILLDWIRRLSDEGKVLQAGD 364
+I ++ RRL EG ++A D
Sbjct: 244 GVKID-EEFCRRLK-EGTRMRAPD 265
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 13/161 (8%)
Query: 569 HRNLVQLCGWCTEQG-EMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLAS 627
H N+V L G CT+ G ++VI ++ LS L + + Y +L
Sbjct: 81 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 628 AILYLHE-----EW--NEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKAT 680
I Y + E+ + + IHR++ + I L ++ F LA + ++ RK
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 681 SGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
+ R +M+PE I T +DV+SFGV++ E+ +
Sbjct: 201 A-----RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 18/108 (16%)
Query: 224 LAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARN 283
+ +AL YLH + IIHRD+K N++L+ + ++ DFG A+ L E + AR
Sbjct: 139 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE------SKQARA 189
Query: 284 HQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
+ F GT Y+ PE + S A SD+++ G ++ ++V+G
Sbjct: 190 NAF--------VGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAG 228
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ SA+ YLH + +IHR++ I L+ DM+ ++ F A+ L+ K N
Sbjct: 139 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANA 191
Query: 685 SVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
V G Y+SPE + A +D+++ G ++ ++V G
Sbjct: 192 FV-GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 113 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 160
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+ + T
Sbjct: 161 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR-------- 209
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 210 -----------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 258
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 90 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 146
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 147 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 202
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG-----------Q 723
AT R+ + +M D++S G ++ E++TG Q
Sbjct: 203 XGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 254
Query: 724 MAVDFRL---PEGLLVKRVHEFEAR 745
+ + RL P L+K++ AR
Sbjct: 255 LKLILRLVGTPGAELLKKISSESAR 279
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 98/225 (43%), Gaps = 31/225 (13%)
Query: 119 LGSGGFGKVYRA-VLPSDGT----VVAVKCLAEKGERFE-KTFAAELVAVAHL-RHRNLV 171
LG G FG+V A D T VAVK L E E + +EL + H+ H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 172 RLRGWCVHED-QLLLVYDYMPNRSLDRVLFRR-----PENLEAAAPLNWEQRKKIIRGLA 225
L G C L+++ ++ +L L + P L E +A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 226 AALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQ 285
+ +L + + IHRD+ N++L + ++ DFGLAR + + Y +R AR
Sbjct: 155 KGMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDY-VRKGDARL-- 208
Query: 286 FHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ ++ PE+ V T +SDV+SFG+++ E+ S
Sbjct: 209 -----------PLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFS 241
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 15/160 (9%)
Query: 569 HRNLVQLCGWCTEQG-EMLVIYDYSATRILSHLL------FHNNHRIGHSILQWHHRYNI 621
H N+V L G CT+ G ++VI ++ LS L F + L H
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 622 IKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATS 681
+A + +L + + IHR++ + I L ++ F LA + ++ RK +
Sbjct: 150 SFQVAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDA 206
Query: 682 GNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
R +M+PE I T +DV+SFGV++ E+ +
Sbjct: 207 -----RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 90/224 (40%), Gaps = 31/224 (13%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK----GERFEKTFAAELVAVAHLRHR 168
F+ ++LG G FGKV+ A A+K L + + E T + V H
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 79
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
L + ++ L V +Y+ L ++++ + + + L
Sbjct: 80 FLTHMFCTFQTKENLFFVMEYLNGGDLMY-------HIQSCHKFDLSRATFYAAEIILGL 132
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
+LH + I++RD+K N++LD + ++ DFG+ + +
Sbjct: 133 QFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGM----------------CKENMLGD 173
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
A+T GT Y+ PE G D +SFG+++ E++ G+
Sbjct: 174 AKTNEFCGTPDYIAPEILL-GQKYNHSVDWWSFGVLLYEMLIGQ 216
Score = 36.6 bits (83), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 55/114 (48%), Gaps = 10/114 (8%)
Query: 613 LQWHHRYNIIKSL---ASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFL 669
+Q H++++ ++ A IL L ++ +++R++ I LD D + ++ F + +
Sbjct: 110 IQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCK-- 167
Query: 670 TRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
N G K G Y++PE + + D +SFGV++ E++ GQ
Sbjct: 168 -ENMLGDAKTNE----FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 18/108 (16%)
Query: 224 LAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARN 283
+ +AL YLH + IIHRD+K N++L+ + ++ DFG A+ L E + AR
Sbjct: 141 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE------SKQARA 191
Query: 284 HQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
+ F GT Y+ PE + S A SD+++ G ++ ++V+G
Sbjct: 192 NXF--------VGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAG 230
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ SA+ YLH + +IHR++ I L+ DM+ ++ F A+ L+ K N
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANX 193
Query: 685 SVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
V G Y+SPE + A +D+++ G ++ ++V G
Sbjct: 194 FV-GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 18/108 (16%)
Query: 224 LAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARN 283
+ +AL YLH + IIHRD+K N++L+ + ++ DFG A+ L E + AR
Sbjct: 142 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE------SKQARA 192
Query: 284 HQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
+ F GT Y+ PE + S A SD+++ G ++ ++V+G
Sbjct: 193 NXF--------VGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAG 231
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ SA+ YLH + +IHR++ I L+ DM+ ++ F A+ L+ K N
Sbjct: 142 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANX 194
Query: 685 SVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
V G Y+SPE + A +D+++ G ++ ++V G
Sbjct: 195 FV-GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 18/108 (16%)
Query: 224 LAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARN 283
+ +AL YLH + IIHRD+K N++L+ + ++ DFG A+ L E + AR
Sbjct: 141 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE------SKQARA 191
Query: 284 HQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
+ F GT Y+ PE + S A SD+++ G ++ ++V+G
Sbjct: 192 NXF--------VGTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAG 230
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ SA+ YLH + +IHR++ I L+ DM+ ++ F A+ L+ K N
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANX 193
Query: 685 SVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
V G Y+SPE + A +D+++ G ++ ++V G
Sbjct: 194 FV-GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 117/264 (44%), Gaps = 42/264 (15%)
Query: 119 LGSGGFGKVYRA-VLPSDGT----VVAVKCLAEKGERFE-KTFAAELVAVAHL-RHRNLV 171
LG G FG+V A D T VAVK L E E + +EL + H+ H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 172 RLRGWCVHEDQLLLVY----------DYMPNRSLDRVLFR-RPENLEAAAPLNWEQRKKI 220
L G C L+V Y+ ++ + V ++ PE+L L E
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF-LTLEHLICY 153
Query: 221 IRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSS 280
+A + +L + + IHRD+ N++L + ++ DFGLAR + + +R
Sbjct: 154 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD-XVRKGD 209
Query: 281 ARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
AR + ++ PE+ V T +SDV+SFG+++ E+ S + YP
Sbjct: 210 ARL-------------PLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGAS---PYP 252
Query: 341 DDQIILLDWIRRLSDEGKVLQAGD 364
+I ++ RRL EG ++A D
Sbjct: 253 GVKID-EEFCRRLK-EGTRMRAPD 274
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 13/161 (8%)
Query: 569 HRNLVQLCGWCTEQG-EMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLAS 627
H N+V L G CT+ G ++VI ++ LS L + + Y +L
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 628 AILY-------LHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKAT 680
I Y + + + IHR++ + I L ++ F LA + ++ RK
Sbjct: 150 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 681 SGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
+ R +M+PE I T +DV+SFGV++ E+ +
Sbjct: 210 A-----RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ D+GLAR + E+
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEM--------------- 179
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 180 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ + LA T ++
Sbjct: 124 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLARH-TDDEM 179
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG-----------Q 723
AT R+ + +M D++S G ++ E++TG Q
Sbjct: 180 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
Query: 724 MAVDFRL---PEGLLVKRVHEFEAR 745
+ + RL P L+K++ AR
Sbjct: 232 LKLILRLVGTPGAELLKKISSESAR 256
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 18/108 (16%)
Query: 224 LAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARN 283
+ +AL YLH + IIHRD+K N++L+ + ++ DFG A+ L E + AR
Sbjct: 141 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE------SKQARA 191
Query: 284 HQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
+ F GT Y+ PE + S A SD+++ G ++ ++V+G
Sbjct: 192 NXFV--------GTAQYVSPELLTEKS-AXKSSDLWALGCIIYQLVAG 230
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ SA+ YLH + +IHR++ I L+ DM+ ++ F A+ L+ K N
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANX 193
Query: 685 SVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLP-EGLLVKRVHEFE 743
V G Y+SPE + A +D+++ G ++ ++V G FR EGL+ ++ + E
Sbjct: 194 FV-GTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG--LPPFRAGNEGLIFAKIIKLE 250
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 95/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 110 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+ + T
Sbjct: 158 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATR-------- 206
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 207 -----------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 255
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 87 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 143
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 144 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 199
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
AT R+ + +M D++S G ++ E++TG+
Sbjct: 200 XGXVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGR 240
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 18/108 (16%)
Query: 224 LAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARN 283
+ +AL YLH + IIHRD+K N++L+ + ++ DFG A+ L E + AR
Sbjct: 144 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE------SKQARA 194
Query: 284 HQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
+ F GT Y+ PE + S A SD+++ G ++ ++V+G
Sbjct: 195 NXFV--------GTAQYVSPELLTEKS-ACKSSDLWALGCIIYQLVAG 233
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ SA+ YLH + +IHR++ I L+ DM+ ++ F A+ L+ K N
Sbjct: 144 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----KQARANX 196
Query: 685 SVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
V G Y+SPE + A +D+++ G ++ ++V G
Sbjct: 197 FV-GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 96/231 (41%), Gaps = 42/231 (18%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLVRLRG 175
++LG G V+R G + A+K R E + L H+N+V+L
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL-- 72
Query: 176 WCVHEDQL----LLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
+ + E+ +L+ ++ P SL VL P N A L + ++R + +++L
Sbjct: 73 FAIEEETTTRHKVLIMEFCPCGSLYTVL-EEPSN---AYGLPESEFLIVLRDVVGGMNHL 128
Query: 232 HEQLETQIIHRDVKTSNVML----DSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
E I+HR++K N+M D Q +L DFG AR LE + Q+
Sbjct: 129 REN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF------------- 172
Query: 288 LAETTRIGGTIGYLPPESFQKGSVAT-------AKSDVFSFGIVVLEVVSG 331
+ GT YL P+ +++ + A D++S G+ +G
Sbjct: 173 ----VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 94/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 179
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 180 ----AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 124 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 179
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
AT R+ + +M D++S G ++ E++TG+
Sbjct: 180 AGFVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 8/110 (7%)
Query: 220 IIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTS 279
I +A A+ +LH + ++HRD+K SN+ ++GDFGL ++ + + Q +
Sbjct: 169 IFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 280 SARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVV 329
+ H + GT Y+ PE G+ + K D+FS G+++ E++
Sbjct: 226 PMPAYATHXGQV----GTKLYMSPEQIH-GNNYSHKVDIFSLGLILFELL 270
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 620 NIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHR-- 677
+I +A A+ +LH ++ ++HR++ S I D ++G F L + +++
Sbjct: 168 HIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 224
Query: 678 ---KATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVV 720
A + + G YMSPE I + D++S G+++ E++
Sbjct: 225 TPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 94/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 179
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 180 ----AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 124 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 179
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
AT R+ + +M D++S G ++ E++TG+
Sbjct: 180 AGFVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 14/166 (8%)
Query: 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFE--KTFAAELVAVAHLRHR 168
+ ++ ++G G +G VY A + VA+K + E K E+ + L+
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLD---RVLFRRPENLEAAAPLNWEQRKKIIRGLA 225
++RL + ED L Y+ D + LF+ P L + K I+ L
Sbjct: 88 YIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTP------IFLTEQHVKTILYNLL 141
Query: 226 AALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHE 271
++HE + IIHRD+K +N +L+ + ++ DFGLAR + +
Sbjct: 142 LGEKFIHE---SGIIHRDLKPANCLLNQDCSVKICDFGLARTINSD 184
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 117/264 (44%), Gaps = 42/264 (15%)
Query: 119 LGSGGFGKVYRA-VLPSDGT----VVAVKCLAEKGERFE-KTFAAELVAVAHL-RHRNLV 171
LG G FG+V A D T VAVK L E E + +EL + H+ H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 172 RLRGWCVHEDQLLLVY----------DYMPNRSLDRVLFR-RPENLEAAAPLNWEQRKKI 220
L G C L+V Y+ ++ + V ++ PE+L L E
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF-LTLEHLICY 153
Query: 221 IRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSS 280
+A + +L + + IHRD+ N++L + ++ DFGLAR + + +R
Sbjct: 154 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-XVRKGD 209
Query: 281 ARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340
AR + ++ PE+ V T +SDV+SFG+++ E+ S + YP
Sbjct: 210 ARL-------------PLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGAS---PYP 252
Query: 341 DDQIILLDWIRRLSDEGKVLQAGD 364
+I ++ RRL EG ++A D
Sbjct: 253 GVKID-EEFCRRLK-EGTRMRAPD 274
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 13/161 (8%)
Query: 569 HRNLVQLCGWCTEQG-EMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLAS 627
H N+V L G CT+ G ++VI ++ LS L + + Y +L
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 628 AILY-------LHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKAT 680
I Y + + + IHR++ + I L ++ F LA + ++ RK
Sbjct: 150 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGD 209
Query: 681 SGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
+ R +M+PE I T +DV+SFGV++ E+ +
Sbjct: 210 A-----RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 96/231 (41%), Gaps = 42/231 (18%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLVRLRG 175
++LG G V+R G + A+K R E + L H+N+V+L
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL-- 72
Query: 176 WCVHEDQL----LLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
+ + E+ +L+ ++ P SL VL P N A L + ++R + +++L
Sbjct: 73 FAIEEETTTRHKVLIMEFCPCGSLYTVL-EEPSN---AYGLPESEFLIVLRDVVGGMNHL 128
Query: 232 HEQLETQIIHRDVKTSNVML----DSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
E I+HR++K N+M D Q +L DFG AR LE + Q+
Sbjct: 129 REN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF------------- 172
Query: 288 LAETTRIGGTIGYLPPESFQKGSVAT-------AKSDVFSFGIVVLEVVSG 331
+ GT YL P+ +++ + A D++S G+ +G
Sbjct: 173 ----VXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 114/259 (44%), Gaps = 36/259 (13%)
Query: 119 LGSGGFGKVYRA-VLPSDGT----VVAVKCLAEKGERFE-KTFAAELVAVAHL-RHRNLV 171
LG G FG+V A D T VAVK L E E + +EL + H+ H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 172 RLRGWCVHED-QLLLVYDYMPNRSLDRVLFRR-----PENLEAAAPLNWEQRKKIIRGLA 225
L G C L+++ ++ +L L + P L E +A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 226 AALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQ 285
+ +L + + IHRD+ N++L + ++ DFGLAR + + Y +R AR
Sbjct: 155 KGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-VRKGDARL-- 208
Query: 286 FHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII 345
+ ++ PE+ V T +SDV+SFG+++ E+ S + YP +I
Sbjct: 209 -----------PLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGAS---PYPGVKID 253
Query: 346 LLDWIRRLSDEGKVLQAGD 364
++ RRL EG ++A D
Sbjct: 254 -EEFCRRLK-EGTRMRAPD 270
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 15/160 (9%)
Query: 569 HRNLVQLCGWCTEQG-EMLVIYDYSATRILSHLL------FHNNHRIGHSILQWHHRYNI 621
H N+V L G CT+ G ++VI ++ LS L F + L H
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 622 IKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATS 681
+A + +L + + IHR++ + I L ++ F LA + ++ RK +
Sbjct: 150 SFQVAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 206
Query: 682 GNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
R +M+PE I T +DV+SFGV++ E+ +
Sbjct: 207 -----RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 95/239 (39%), Gaps = 32/239 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V + G +AVK L+ + K EL + H++H N++ L
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 177 CVHEDQLLLVYD-YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQL 235
L D Y+ + L N+ L + + +I + L Y+H
Sbjct: 119 FTPATSLEEFNDVYLVTHLMGADL----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS-- 172
Query: 236 ETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIG 295
IIHRD+K SN+ ++ ++ DFGLAR + E+ T
Sbjct: 173 -ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------------------TGYV 212
Query: 296 GTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIRRLS 354
T Y PE D++S G ++ E+++GR T D I L I RL+
Sbjct: 213 ATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGT---DHINQLQQIMRLT 268
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 96 RTYRELRLLKHMKHENVIGLLDVFTPATSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 152
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 153 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 208
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
AT R+ + +M D++S G ++ E++TG+
Sbjct: 209 TGYVATRWYRAPEIMLNWM--------HYNMTVDIWSVGCIMAELLTGR 249
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 94/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 86 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 133
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DFGLAR + E+
Sbjct: 134 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--------------- 175
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 176 ----AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 63 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 119
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 120 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH-TDDEM 175
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
AT R+ + +M D++S G ++ E++TG+
Sbjct: 176 AGFVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGR 216
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 88/220 (40%), Gaps = 31/220 (14%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK----GERFEKTFAAELVAVAHLRHRNLVR 172
++LG G FGKV+ A A+K L + + E T + V H L
Sbjct: 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 82
Query: 173 LRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
+ ++ L V +Y+ L ++++ + + + L +LH
Sbjct: 83 MFCTFQTKENLFFVMEYLNGGDLMY-------HIQSCHKFDLSRATFYAAEIILGLQFLH 135
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETT 292
+ I++RD+K N++LD + ++ DFG+ + + A+T
Sbjct: 136 SK---GIVYRDLKLDNILLDKDGHIKIADFGM----------------CKENMLGDAKTN 176
Query: 293 RIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
GT Y+ PE G D +SFG+++ E++ G+
Sbjct: 177 XFCGTPDYIAPEILL-GQKYNHSVDWWSFGVLLYEMLIGQ 215
Score = 36.2 bits (82), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 55/114 (48%), Gaps = 10/114 (8%)
Query: 613 LQWHHRYNIIKSL---ASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFL 669
+Q H++++ ++ A IL L ++ +++R++ I LD D + ++ F + +
Sbjct: 109 IQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCK-- 166
Query: 670 TRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
N G K G Y++PE + + D +SFGV++ E++ GQ
Sbjct: 167 -ENMLGDAKTNX----FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 103/218 (47%), Gaps = 32/218 (14%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHL-RHRNLVRLRG 175
E LG G FG V+R V S K + KG ++ + +++ ++ RHRN++ L
Sbjct: 11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT--DQVLVKKEISILNIARHRNILHLHE 68
Query: 176 WCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQL 235
++L+++++++ LD +F R +A LN + + + AL +LH
Sbjct: 69 SFESMEELVMIFEFISG--LD--IFERINT--SAFELNEREIVSYVHQVCEALQFLHSH- 121
Query: 236 ETQIIHRDVKTSNVMLDSQYNA--RLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTR 293
I H D++ N++ ++ ++ ++ +FG AR L+ +++ ++
Sbjct: 122 --NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPE----------- 168
Query: 294 IGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
Y PE Q V+TA +D++S G +V ++SG
Sbjct: 169 ------YYAPEVHQHDVVSTA-TDMWSLGTLVYVLLSG 199
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 95/220 (43%), Gaps = 36/220 (16%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKCL--AEKGERFEKTFAAELVAVAHLRHRNLVRLRG 175
+LG G FG+V + AVK + A + T E+ + L H N+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 176 WCVHEDQLLLVYD-YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQ 234
+V + Y D ++ R+ + AA +II+ + + + Y+H+
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA--------RIIKQVFSGITYMHKH 140
Query: 235 LETQIIHRDVKTSNVMLDSQY---NARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
I+HRD+K N++L+S+ + ++ DFGL+ + + + R
Sbjct: 141 ---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI------------- 184
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
GT Y+ PE + K DV+S G+++ ++SG
Sbjct: 185 ----GTAYYIAPEVLR--GTYDEKCDVWSAGVILYILLSG 218
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 71/167 (42%), Gaps = 23/167 (13%)
Query: 560 ELQNLARLRHRNLVQLCGWCTEQGEMLVIYD-YSATRILSHLLFHNNHRIGHSILQWHHR 618
E++ L +L H N+++L + ++ + Y+ + + I H
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEI-------IKRKRFSEHDA 123
Query: 619 YNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDP---DMNPRLGSFALAEFLTRNDHG 675
IIK + S I Y+H+ ++HR++ I L+ D + ++ F L+ +N
Sbjct: 124 ARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM 180
Query: 676 HRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
+ G Y++PE + G DV+S GV++ +++G
Sbjct: 181 KDRI--------GTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSG 218
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 90/223 (40%), Gaps = 42/223 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVK----------CLAEKGERFEKTFAAELVAVAHLRHR 168
LGSG FG V+ AV V VK C E + + T E+ ++ + H
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTL--EIAILSRVEHA 89
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLF--RRPENLEAAAPLNWEQRKKIIRGLAA 226
N++++ ++ LV + LD F R P E A I R L +
Sbjct: 90 NIIKVLDIFENQGFFQLVMEKH-GSGLDLFAFIDRHPRLDEPLA-------SYIFRQLVS 141
Query: 227 ALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQF 286
A+ YL + IIHRD+K N+++ + +L DFG A +LE R F
Sbjct: 142 AVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAYLE------------RGKLF 186
Query: 287 HLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVV 329
+ GTI Y PE + +++S G+ + +V
Sbjct: 187 Y-----TFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 120/290 (41%), Gaps = 76/290 (26%)
Query: 115 EDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAA----------------- 157
+DE+ G G +G V A +D T A+K L++K + F
Sbjct: 18 KDEI-GKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQP 76
Query: 158 ---------ELVAVAHLRHRNLVRLRGWC--VHEDQLLLVYDYMPNRSLDRVLFRRPENL 206
E+ + L H N+V+L +ED L +V++ + + V
Sbjct: 77 RGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV-------- 128
Query: 207 EAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266
PL+ +Q + + L + YLH Q +IIHRD+K SN+++ + ++ DFG++
Sbjct: 129 PTLKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSN 185
Query: 267 WLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKG-SVATAKS-DVFSFGIV 324
+ + S A L+ T GT ++ PES + + + K+ DV++ G+
Sbjct: 186 --------EFKGSDAL-----LSNTV---GTPAFMAPESLSETRKIFSGKALDVWAMGVT 229
Query: 325 VLEVVSGR---------------RAVDLTYPDDQII---LLDWIRRLSDE 356
+ V G+ ++ L +PD I L D I R+ D+
Sbjct: 230 LYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDK 279
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 95/220 (43%), Gaps = 36/220 (16%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKCL--AEKGERFEKTFAAELVAVAHLRHRNLVRLRG 175
+LG G FG+V + AVK + A + T E+ + L H N+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 176 WCVHEDQLLLVYD-YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQ 234
+V + Y D ++ R+ + AA +II+ + + + Y+H+
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA--------RIIKQVFSGITYMHKH 140
Query: 235 LETQIIHRDVKTSNVMLDSQ---YNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
I+HRD+K N++L+S+ + ++ DFGL+ + + + R
Sbjct: 141 ---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI------------- 184
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
GT Y+ PE + K DV+S G+++ ++SG
Sbjct: 185 ----GTAYYIAPEVLR--GTYDEKCDVWSAGVILYILLSG 218
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 72/167 (43%), Gaps = 23/167 (13%)
Query: 560 ELQNLARLRHRNLVQLCGWCTEQGEMLVIYD-YSATRILSHLLFHNNHRIGHSILQWHHR 618
E++ L +L H N+++L + ++ + Y+ + + I H
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEI-------IKRKRFSEHDA 123
Query: 619 YNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDP---DMNPRLGSFALAEFLTRNDHG 675
IIK + S I Y+H+ ++HR++ I L+ D + ++ F L+ +N
Sbjct: 124 ARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN--- 177
Query: 676 HRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
+ + G Y++PE + G DV+S GV++ +++G
Sbjct: 178 -----TKMKDRIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSG 218
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 100/241 (41%), Gaps = 44/241 (18%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKCLAEK----GERFEKTFAAEL-VAV-----AHLRH 167
+LG GGFG V+ +D VA+K + + L VA+ A H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 168 RNLVRLRGWCVHEDQLLLVYD-YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAA 226
++RL W ++ +LV + +P + L + + PL + + A
Sbjct: 98 PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEK-------GPLGEGPSRCFFGQVVA 150
Query: 227 ALHYLHEQLETQIIHRDVKTSNVMLDSQYN-ARLGDFGLARWLEHELQYQMRTSSARNHQ 285
A+ + H + ++HRD+K N+++D + A+L DFG L H+ Y
Sbjct: 151 AIQHCHSR---GVVHRDIKDENILIDLRRGCAKLIDFGSGALL-HDEPY----------- 195
Query: 286 FHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII 345
T GT Y PPE + + V+S GI++ ++V G D+ + DQ I
Sbjct: 196 ------TDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCG----DIPFERDQEI 245
Query: 346 L 346
L
Sbjct: 246 L 246
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 106/235 (45%), Gaps = 55/235 (23%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
+GSGG KV++ VL + A+K L E + ++ E+ + L+
Sbjct: 36 IGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ--------- 85
Query: 177 CVHEDQLLLVYDYMPNRSLDRVLFRRPE--NLEAAAPLN-------WEQRKKIIRGLAAA 227
H D+++ +YDY D+ ++ E N++ + L WE RK + + A
Sbjct: 86 --HSDKIIRLYDY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEA 139
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
+H +H+ I+H D+K +N ++ +L DFG+A ++ + TS ++ Q
Sbjct: 140 VHTIHQH---GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPD-----TTSVVKDSQV- 189
Query: 288 LAETTRIGGTIGYLPPESFQKGSVA----------TAKSDVFSFGIVVLEVVSGR 332
GT+ Y+PPE+ + S + + KSDV+S G ++ + G+
Sbjct: 190 --------GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 95/220 (43%), Gaps = 36/220 (16%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKCL--AEKGERFEKTFAAELVAVAHLRHRNLVRLRG 175
+LG G FG+V + AVK + A + T E+ + L H N+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 176 WCVHEDQLLLVYD-YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQ 234
+V + Y D ++ R+ + AA +II+ + + + Y+H+
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA--------RIIKQVFSGITYMHKH 140
Query: 235 LETQIIHRDVKTSNVMLDSQ---YNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
I+HRD+K N++L+S+ + ++ DFGL+ + + + R
Sbjct: 141 ---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI------------- 184
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
GT Y+ PE + K DV+S G+++ ++SG
Sbjct: 185 ----GTAYYIAPEVLR--GTYDEKCDVWSAGVILYILLSG 218
Score = 36.6 bits (83), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 72/167 (43%), Gaps = 23/167 (13%)
Query: 560 ELQNLARLRHRNLVQLCGWCTEQGEMLVIYD-YSATRILSHLLFHNNHRIGHSILQWHHR 618
E++ L +L H N+++L + ++ + Y+ + + I H
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEI-------IKRKRFSEHDA 123
Query: 619 YNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDP---DMNPRLGSFALAEFLTRNDHG 675
IIK + S I Y+H+ ++HR++ I L+ D + ++ F L+ +N
Sbjct: 124 ARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN--- 177
Query: 676 HRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
+ + G Y++PE + G DV+S GV++ +++G
Sbjct: 178 -----TKMKDRIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSG 218
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 98/217 (45%), Gaps = 29/217 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCL-AEKGERFEKTFAAELVAVAHLRHRNLVRLRGWC 177
LGSG FG V+ S G +K + ++ + + AE+ + L H N++++ +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKI--FE 87
Query: 178 VHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLET 237
V ED + Y M +L R L+ ++++ + AL Y H Q
Sbjct: 88 VFEDYHNM-YIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ--- 143
Query: 238 QIIHRDVKTSNVML-DSQYNA--RLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRI 294
++H+D+K N++ D+ ++ ++ DFGLA + + +T
Sbjct: 144 HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD-----------------EHSTNA 186
Query: 295 GGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
GT Y+ PE F++ T K D++S G+V+ +++G
Sbjct: 187 AGTALYMAPEVFKRD--VTFKCDIWSAGVVMYFLLTG 221
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 105/255 (41%), Gaps = 32/255 (12%)
Query: 541 LVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHL 600
++K + + + E++ L L H N++++ + M ++ + L
Sbjct: 51 VIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLER 110
Query: 601 LFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNP-- 658
+ R L + ++K + +A+ Y H ++ V+H+++ I D +P
Sbjct: 111 IVSAQAR--GKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQ-DTSPHS 164
Query: 659 --RLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVV 716
++ F LAE ++H A G YM+PE + + T D++S GVV+
Sbjct: 165 PIKIIDFGLAELFKSDEHSTNAA--------GTALYMAPEVFKR-DVTFKCDIWSAGVVM 215
Query: 717 LEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIAC 776
++TG + G ++ V + K P + ++ + + L+K +
Sbjct: 216 YFLLTGCLPFT-----GTSLEEVQQKATYKEP-----NYAVECRPLTPQAVDLLKQMLT- 264
Query: 777 TLSNPELRPSMRQIL 791
+PE RPS Q+L
Sbjct: 265 --KDPERRPSAAQVL 277
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 106/235 (45%), Gaps = 55/235 (23%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
+GSGG KV++ VL + A+K L E + ++ E+ + L+
Sbjct: 20 IGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ--------- 69
Query: 177 CVHEDQLLLVYDYMPNRSLDRVLFRRPE--NLEAAAPLN-------WEQRKKIIRGLAAA 227
H D+++ +YDY D+ ++ E N++ + L WE RK + + A
Sbjct: 70 --HSDKIIRLYDY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEA 123
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
+H +H+ I+H D+K +N ++ +L DFG+A ++ + TS ++ Q
Sbjct: 124 VHTIHQH---GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPD-----TTSVVKDSQV- 173
Query: 288 LAETTRIGGTIGYLPPESFQKGSVA----------TAKSDVFSFGIVVLEVVSGR 332
GT+ Y+PPE+ + S + + KSDV+S G ++ + G+
Sbjct: 174 --------GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 220
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 100/223 (44%), Gaps = 27/223 (12%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLR-HRNLVRLRG 175
E+LG G + KV AV +G AVK + ++ E+ + + ++N++ L
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIE 78
Query: 176 WCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQL 235
+ + + LV++ + S+ +++ N + +++R +AAAL +LH +
Sbjct: 79 FFEDDTRFYLVFEKLQGGSI-------LAHIQKQKHFNEREASRVVRDVAAALDFLHTK- 130
Query: 236 ETQIIHRDVKTSNVMLDSQYN---ARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETT 292
I HRD+K N++ +S ++ DF L + ++ S E T
Sbjct: 131 --GIAHRDLKPENILCESPEKVSPVKICDFDLGSGM------KLNNSCT---PITTPELT 179
Query: 293 RIGGTIGYLPPESFQ----KGSVATAKSDVFSFGIVVLEVVSG 331
G+ Y+ PE + + + + D++S G+V+ ++SG
Sbjct: 180 TPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 89/220 (40%), Gaps = 32/220 (14%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK--GERFEKTFAAELVAVAHLRHRNLVRLR 174
E +G G F V R V G A K + K R + E L+H N+VRL
Sbjct: 10 EDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLH 69
Query: 175 GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQ 234
E LV+D + L + R EA A I+ + A+ + H+
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADA-------SHCIQQILEAVLHCHQ- 121
Query: 235 LETQIIHRDVKTSNVMLDSQYNA---RLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
++HRD+K N++L S+ +L DFGLA + + F A
Sbjct: 122 --MGVVHRDLKPENLLLASKCKGAAVKLADFGLA----------IEVQGDQQAWFGFA-- 167
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
GT GYL PE +K + D+++ G+++ ++ G
Sbjct: 168 ----GTPGYLSPEVLRKEAYGKP-VDIWACGVILYILLVG 202
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 77/175 (44%), Gaps = 19/175 (10%)
Query: 553 LRTRFSNELQNLAR----LRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRI 608
L R +L+ AR L+H N+V+L +E+G +++D + LF + +
Sbjct: 42 LSARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDL----VTGGELFEDI--V 95
Query: 609 GHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEF 668
+ I+ + A+L+ H+ V+HR++ + L + + LA+F
Sbjct: 96 AREYYSEADASHCIQQILEAVLHCHQM---GVVHRDLKPENLLLASKC--KGAAVKLADF 150
Query: 669 -LTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
L G ++A G G GY+SPE + D+++ GV++ ++ G
Sbjct: 151 GLAIEVQGDQQAWFG---FAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 94/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ FGLAR + E+
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEM--------------- 179
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 180 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 124 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLARH-TDDEM 179
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG-----------Q 723
AT R+ + +M D++S G ++ E++TG Q
Sbjct: 180 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
Query: 724 MAVDFRL---PEGLLVKRVHEFEAR 745
+ + RL P L+K++ AR
Sbjct: 232 LKLILRLVGTPGAELLKKISSESAR 256
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 106/235 (45%), Gaps = 55/235 (23%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
+GSGG KV++ VL + A+K L E + ++ E+ + L+
Sbjct: 17 IGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ--------- 66
Query: 177 CVHEDQLLLVYDYMPNRSLDRVLFRRPE--NLEAAAPLN-------WEQRKKIIRGLAAA 227
H D+++ +YDY D+ ++ E N++ + L WE RK + + A
Sbjct: 67 --HSDKIIRLYDY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEA 120
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
+H +H+ I+H D+K +N ++ +L DFG+A ++ + TS ++ Q
Sbjct: 121 VHTIHQH---GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPD-----TTSVVKDSQV- 170
Query: 288 LAETTRIGGTIGYLPPESFQKGSVA----------TAKSDVFSFGIVVLEVVSGR 332
GT+ Y+PPE+ + S + + KSDV+S G ++ + G+
Sbjct: 171 --------GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 217
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 106/235 (45%), Gaps = 55/235 (23%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
+GSGG KV++ VL + A+K L E + ++ E+ + L+
Sbjct: 64 IGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ--------- 113
Query: 177 CVHEDQLLLVYDYMPNRSLDRVLFRRPE--NLEAAAPLN-------WEQRKKIIRGLAAA 227
H D+++ +YDY D+ ++ E N++ + L WE RK + + A
Sbjct: 114 --HSDKIIRLYDY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEA 167
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
+H +H+ I+H D+K +N ++ +L DFG+A ++ + TS ++ Q
Sbjct: 168 VHTIHQH---GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPD-----TTSVVKDSQV- 217
Query: 288 LAETTRIGGTIGYLPPESFQKGSVA----------TAKSDVFSFGIVVLEVVSGR 332
GT+ Y+PPE+ + S + + KSDV+S G ++ + G+
Sbjct: 218 --------GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 40/238 (16%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKC-----LAEKGERFEKT-FAAELVAVAHLRH--RN 169
+LGSGGFG VY + SD VA+K +++ GE T E+V + +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL W D +L+ + P D F + L E + + A+
Sbjct: 76 VIRLLDWFERPDSFVLILE-RPEPVQDLFDF-----ITERGALQEELARSFFWQVLEAVR 129
Query: 230 YLHEQLETQIIHRDVKTSNVMLD-SQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
+ H ++HRD+K N+++D ++ +L DFG L+ +
Sbjct: 130 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---------------- 170
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346
T GT Y PPE + + V+S GI++ ++V G D+ + D+ I+
Sbjct: 171 --YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII 222
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 106/235 (45%), Gaps = 55/235 (23%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
+GSGG KV++ VL + A+K L E + ++ E+ + L+
Sbjct: 16 IGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ--------- 65
Query: 177 CVHEDQLLLVYDYMPNRSLDRVLFRRPE--NLEAAAPLN-------WEQRKKIIRGLAAA 227
H D+++ +YDY D+ ++ E N++ + L WE RK + + A
Sbjct: 66 --HSDKIIRLYDY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEA 119
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
+H +H+ I+H D+K +N ++ +L DFG+A ++ + TS ++ Q
Sbjct: 120 VHTIHQH---GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPD-----TTSVVKDSQV- 169
Query: 288 LAETTRIGGTIGYLPPESFQKGSVA----------TAKSDVFSFGIVVLEVVSGR 332
GT+ Y+PPE+ + S + + KSDV+S G ++ + G+
Sbjct: 170 --------GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 216
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 40/238 (16%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKC-----LAEKGERFEKT-FAAELVAVAHLRH--RN 169
+LGSGGFG VY + SD VA+K +++ GE T E+V + +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL W D +L+ + P D F + L E + + A+
Sbjct: 76 VIRLLDWFERPDSFVLILE-RPEPVQDLFDF-----ITERGALQEELARSFFWQVLEAVR 129
Query: 230 YLHEQLETQIIHRDVKTSNVMLD-SQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
+ H ++HRD+K N+++D ++ +L DFG L+ +
Sbjct: 130 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---------------- 170
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346
T GT Y PPE + + V+S GI++ ++V G D+ + D+ I+
Sbjct: 171 --YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII 222
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 94/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ D GLAR + E+
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEM--------------- 179
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 180 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 87/205 (42%), Gaps = 30/205 (14%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ LA T ++
Sbjct: 124 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLARH-TDDEM 179
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG-----------Q 723
AT R+ + +M D++S G ++ E++TG Q
Sbjct: 180 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
Query: 724 MAVDFRL---PEGLLVKRVHEFEAR 745
+ + RL P L+K++ AR
Sbjct: 232 LKLILRLVGTPGAELLKKISSESAR 256
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 40/238 (16%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKC-----LAEKGERFEKT-FAAELVAVAHLRH--RN 169
+LGSGGFG VY + SD VA+K +++ GE T E+V + +
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL W D +L+ + P D F + L E + + A+
Sbjct: 90 VIRLLDWFERPDSFVLILE-RPEPVQDLFDF-----ITERGALQEELARSFFWQVLEAVR 143
Query: 230 YLHEQLETQIIHRDVKTSNVMLD-SQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
+ H ++HRD+K N+++D ++ +L DFG L+ +
Sbjct: 144 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---------------- 184
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346
T GT Y PPE + + V+S GI++ ++V G D+ + D+ I+
Sbjct: 185 --YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII 236
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 40/238 (16%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKC-----LAEKGERFEKT-FAAELVAVAHLRH--RN 169
+LGSGGFG VY + SD VA+K +++ GE T E+V + +
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL W D +L+ + P D F + L E + + A+
Sbjct: 118 VIRLLDWFERPDSFVLILE-RPEPVQDLFDF-----ITERGALQEELARSFFWQVLEAVR 171
Query: 230 YLHEQLETQIIHRDVKTSNVMLD-SQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
+ H ++HRD+K N+++D ++ +L DFG L+ +
Sbjct: 172 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---------------- 212
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346
T GT Y PPE + + V+S GI++ ++V G D+ + D+ I+
Sbjct: 213 --YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII 264
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 40/238 (16%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKC-----LAEKGERFEKT-FAAELVAVAHLRH--RN 169
+LGSGGFG VY + SD VA+K +++ GE T E+V + +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL W D +L+ + P D F + L E + + A+
Sbjct: 75 VIRLLDWFERPDSFVLILE-RPEPVQDLFDF-----ITERGALQEELARSFFWQVLEAVR 128
Query: 230 YLHEQLETQIIHRDVKTSNVMLD-SQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
+ H ++HRD+K N+++D ++ +L DFG L+ +
Sbjct: 129 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---------------- 169
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346
T GT Y PPE + + V+S GI++ ++V G D+ + D+ I+
Sbjct: 170 --YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII 221
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 40/238 (16%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKC-----LAEKGERFEKT-FAAELVAVAHLRH--RN 169
+LGSGGFG VY + SD VA+K +++ GE T E+V + +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL W D +L+ + P D F + L E + + A+
Sbjct: 91 VIRLLDWFERPDSFVLILE-RPEPVQDLFDF-----ITERGALQEELARSFFWQVLEAVR 144
Query: 230 YLHEQLETQIIHRDVKTSNVMLD-SQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
+ H ++HRD+K N+++D ++ +L DFG L+ +
Sbjct: 145 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---------------- 185
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346
T GT Y PPE + + V+S GI++ ++V G D+ + D+ I+
Sbjct: 186 --YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII 237
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 40/238 (16%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKC-----LAEKGERFEKT-FAAELVAVAHLRH--RN 169
+LGSGGFG VY + SD VA+K +++ GE T E+V + +
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL W D +L+ + P D F + L E + + A+
Sbjct: 110 VIRLLDWFERPDSFVLILE-RPEPVQDLFDF-----ITERGALQEELARSFFWQVLEAVR 163
Query: 230 YLHEQLETQIIHRDVKTSNVMLD-SQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
+ H ++HRD+K N+++D ++ +L DFG L+ +
Sbjct: 164 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---------------- 204
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346
T GT Y PPE + + V+S GI++ ++V G D+ + D+ I+
Sbjct: 205 --YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII 256
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 40/238 (16%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKC-----LAEKGERFEKT-FAAELVAVAHLR--HRN 169
+LGSGGFG VY + SD VA+K +++ GE T E+V + +
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 97
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL W D +L+ + P D F + L E + + A+
Sbjct: 98 VIRLLDWFERPDSFVLILE-RPEPVQDLFDF-----ITERGALQEELARSFFWQVLEAVR 151
Query: 230 YLHEQLETQIIHRDVKTSNVMLD-SQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
+ H ++HRD+K N+++D ++ +L DFG L+ +
Sbjct: 152 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---------------- 192
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346
T GT Y PPE + + V+S GI++ ++V G D+ + D+ I+
Sbjct: 193 --YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII 244
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 40/238 (16%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKC-----LAEKGERFEKT-FAAELVAVAHLRH--RN 169
+LGSGGFG VY + SD VA+K +++ GE T E+V + +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL W D +L+ + P D F + L E + + A+
Sbjct: 91 VIRLLDWFERPDSFVLILE-RPEPVQDLFDF-----ITERGALQEELARSFFWQVLEAVR 144
Query: 230 YLHEQLETQIIHRDVKTSNVMLD-SQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
+ H ++HRD+K N+++D ++ +L DFG L+ +
Sbjct: 145 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---------------- 185
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346
T GT Y PPE + + V+S GI++ ++V G D+ + D+ I+
Sbjct: 186 --YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII 237
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 94/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ DF LAR + E+
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEM--------------- 179
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 180 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ F LA T ++
Sbjct: 124 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLARH-TDDEM 179
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
AT R+ + +M D++S G ++ E++TG+
Sbjct: 180 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 40/238 (16%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKC-----LAEKGERFEKT-FAAELVAVAHLRH--RN 169
+LGSGGFG VY + SD VA+K +++ GE T E+V + +
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL W D +L+ + P D F + L E + + A+
Sbjct: 90 VIRLLDWFERPDSFVLILE-RPEPVQDLFDF-----ITERGALQEELARSFFWQVLEAVR 143
Query: 230 YLHEQLETQIIHRDVKTSNVMLD-SQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
+ H ++HRD+K N+++D ++ +L DFG L+ +
Sbjct: 144 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---------------- 184
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346
T GT Y PPE + + V+S GI++ ++V G D+ + D+ I+
Sbjct: 185 --YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII 236
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 40/238 (16%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKC-----LAEKGERFEKT-FAAELVAVAHLRH--RN 169
+LGSGGFG VY + SD VA+K +++ GE T E+V + +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL W D +L+ + P D F + L E + + A+
Sbjct: 104 VIRLLDWFERPDSFVLILE-RPEPVQDLFDF-----ITERGALQEELARSFFWQVLEAVR 157
Query: 230 YLHEQLETQIIHRDVKTSNVMLD-SQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
+ H ++HRD+K N+++D ++ +L DFG L+ +
Sbjct: 158 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---------------- 198
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346
T GT Y PPE + + V+S GI++ ++V G D+ + D+ I+
Sbjct: 199 --YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII 250
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 40/238 (16%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKC-----LAEKGERFEKT-FAAELVAVAHLR--HRN 169
+LGSGGFG VY + SD VA+K +++ GE T E+V + +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL W D +L+ + P D F + L E + + A+
Sbjct: 71 VIRLLDWFERPDSFVLILE-RPEPVQDLFDF-----ITERGALQEELARSFFWQVLEAVR 124
Query: 230 YLHEQLETQIIHRDVKTSNVMLD-SQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
+ H ++HRD+K N+++D ++ +L DFG L+ +
Sbjct: 125 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---------------- 165
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346
T GT Y PPE + + V+S GI++ ++V G D+ + D+ I+
Sbjct: 166 --YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII 217
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 40/238 (16%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKC-----LAEKGERFEKT-FAAELVAVAHLR--HRN 169
+LGSGGFG VY + SD VA+K +++ GE T E+V + +
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL W D +L+ + P D F + L E + + A+
Sbjct: 74 VIRLLDWFERPDSFVLILE-RPEPVQDLFDF-----ITERGALQEELARSFFWQVLEAVR 127
Query: 230 YLHEQLETQIIHRDVKTSNVMLD-SQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
+ H ++HRD+K N+++D ++ +L DFG L+ +
Sbjct: 128 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---------------- 168
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346
T GT Y PPE + + V+S GI++ ++V G D+ + D+ I+
Sbjct: 169 --YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII 220
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 40/238 (16%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKC-----LAEKGERFEKT-FAAELVAVAHLRH--RN 169
+LGSGGFG VY + SD VA+K +++ GE T E+V + +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL W D +L+ + P D F + L E + + A+
Sbjct: 104 VIRLLDWFERPDSFVLILE-RPEPVQDLFDF-----ITERGALQEELARSFFWQVLEAVR 157
Query: 230 YLHEQLETQIIHRDVKTSNVMLD-SQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
+ H ++HRD+K N+++D ++ +L DFG L+ +
Sbjct: 158 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---------------- 198
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346
T GT Y PPE + + V+S GI++ ++V G D+ + D+ I+
Sbjct: 199 --YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII 250
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 40/238 (16%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKC-----LAEKGERFEKT-FAAELVAVAHLRH--RN 169
+LGSGGFG VY + SD VA+K +++ GE T E+V + +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL W D +L+ + P D F + L E + + A+
Sbjct: 103 VIRLLDWFERPDSFVLILE-RPEPVQDLFDF-----ITERGALQEELARSFFWQVLEAVR 156
Query: 230 YLHEQLETQIIHRDVKTSNVMLD-SQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
+ H ++HRD+K N+++D ++ +L DFG L+ +
Sbjct: 157 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---------------- 197
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346
T GT Y PPE + + V+S GI++ ++V G D+ + D+ I+
Sbjct: 198 --YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII 249
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 40/238 (16%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKC-----LAEKGERFEKT-FAAELVAVAHLRH--RN 169
+LGSGGFG VY + SD VA+K +++ GE T E+V + +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL W D +L+ + P D F + L E + + A+
Sbjct: 103 VIRLLDWFERPDSFVLILE-RPEPVQDLFDF-----ITERGALQEELARSFFWQVLEAVR 156
Query: 230 YLHEQLETQIIHRDVKTSNVMLD-SQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
+ H ++HRD+K N+++D ++ +L DFG L+ +
Sbjct: 157 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---------------- 197
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346
T GT Y PPE + + V+S GI++ ++V G D+ + D+ I+
Sbjct: 198 --YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII 249
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 40/238 (16%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKC-----LAEKGERFEKT-FAAELVAVAHLRH--RN 169
+LGSGGFG VY + SD VA+K +++ GE T E+V + +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL W D +L+ + P D F + L E + + A+
Sbjct: 103 VIRLLDWFERPDSFVLILE-RPEPVQDLFDF-----ITERGALQEELARSFFWQVLEAVR 156
Query: 230 YLHEQLETQIIHRDVKTSNVMLD-SQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
+ H ++HRD+K N+++D ++ +L DFG L+ +
Sbjct: 157 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---------------- 197
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346
T GT Y PPE + + V+S GI++ ++V G D+ + D+ I+
Sbjct: 198 --YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII 249
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 40/238 (16%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKC-----LAEKGERFEKT-FAAELVAVAHLRH--RN 169
+LGSGGFG VY + SD VA+K +++ GE T E+V + +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL W D +L+ + P D F + L E + + A+
Sbjct: 104 VIRLLDWFERPDSFVLILE-RPEPVQDLFDF-----ITERGALQEELARSFFWQVLEAVR 157
Query: 230 YLHEQLETQIIHRDVKTSNVMLD-SQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
+ H ++HRD+K N+++D ++ +L DFG L+ +
Sbjct: 158 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---------------- 198
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346
T GT Y PPE + + V+S GI++ ++V G D+ + D+ I+
Sbjct: 199 --YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII 250
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 40/238 (16%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKC-----LAEKGERFEKT-FAAELVAVAHLRH--RN 169
+LGSGGFG VY + SD VA+K +++ GE T E+V + +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL W D +L+ + P D F + L E + + A+
Sbjct: 104 VIRLLDWFERPDSFVLILE-RPEPVQDLFDF-----ITERGALQEELARSFFWQVLEAVR 157
Query: 230 YLHEQLETQIIHRDVKTSNVMLD-SQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
+ H ++HRD+K N+++D ++ +L DFG L+ +
Sbjct: 158 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---------------- 198
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346
T GT Y PPE + + V+S GI++ ++V G D+ + D+ I+
Sbjct: 199 --YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII 250
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 40/238 (16%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKC-----LAEKGERFEKT-FAAELVAVAHLRH--RN 169
+LGSGGFG VY + SD VA+K +++ GE T E+V + +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL W D +L+ + P D F + L E + + A+
Sbjct: 103 VIRLLDWFERPDSFVLILE-RPEPVQDLFDF-----ITERGALQEELARSFFWQVLEAVR 156
Query: 230 YLHEQLETQIIHRDVKTSNVMLD-SQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
+ H ++HRD+K N+++D ++ +L DFG L+ +
Sbjct: 157 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---------------- 197
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346
T GT Y PPE + + V+S GI++ ++V G D+ + D+ I+
Sbjct: 198 --YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII 249
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 40/238 (16%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKC-----LAEKGERFEKT-FAAELVAVAHLRH--RN 169
+LGSGGFG VY + SD VA+K +++ GE T E+V + +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL W D +L+ + P D F + L E + + A+
Sbjct: 91 VIRLLDWFERPDSFVLILE-RPEPVQDLFDF-----ITERGALQEELARSFFWQVLEAVR 144
Query: 230 YLHEQLETQIIHRDVKTSNVMLD-SQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
+ H ++HRD+K N+++D ++ +L DFG L+ +
Sbjct: 145 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---------------- 185
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346
T GT Y PPE + + V+S GI++ ++V G D+ + D+ I+
Sbjct: 186 --YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII 237
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 40/238 (16%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKC-----LAEKGERFEKT-FAAELVAVAHLRH--RN 169
+LGSGGFG VY + SD VA+K +++ GE T E+V + +
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL W D +L+ + P D F + L E + + A+
Sbjct: 118 VIRLLDWFERPDSFVLILE-RPEPVQDLFDF-----ITERGALQEELARSFFWQVLEAVR 171
Query: 230 YLHEQLETQIIHRDVKTSNVMLD-SQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
+ H ++HRD+K N+++D ++ +L DFG L+ +
Sbjct: 172 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---------------- 212
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346
T GT Y PPE + + V+S GI++ ++V G D+ + D+ I+
Sbjct: 213 --YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII 264
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 106/235 (45%), Gaps = 55/235 (23%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
+GSGG KV++ VL + A+K L E + ++ E+ + L+
Sbjct: 64 IGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ--------- 113
Query: 177 CVHEDQLLLVYDYMPNRSLDRVLFRRPE--NLEAAAPLN-------WEQRKKIIRGLAAA 227
H D+++ +YDY D+ ++ E N++ + L WE RK + + A
Sbjct: 114 --HSDKIIRLYDY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEA 167
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
+H +H+ I+H D+K +N ++ +L DFG+A ++ + TS ++ Q
Sbjct: 168 VHTIHQH---GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDT-----TSVVKDSQV- 217
Query: 288 LAETTRIGGTIGYLPPESFQKGSVA----------TAKSDVFSFGIVVLEVVSGR 332
GT+ Y+PPE+ + S + + KSDV+S G ++ + G+
Sbjct: 218 --------GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 40/238 (16%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKC-----LAEKGERFEKT-FAAELVAVAHLRH--RN 169
+LGSGGFG VY + SD VA+K +++ GE T E+V + +
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 122
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL W D +L+ + P D F + L E + + A+
Sbjct: 123 VIRLLDWFERPDSFVLILE-RPEPVQDLFDF-----ITERGALQEELARSFFWQVLEAVR 176
Query: 230 YLHEQLETQIIHRDVKTSNVMLD-SQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
+ H ++HRD+K N+++D ++ +L DFG L+ +
Sbjct: 177 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---------------- 217
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346
T GT Y PPE + + V+S GI++ ++V G D+ + D+ I+
Sbjct: 218 --YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII 269
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 40/238 (16%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKC-----LAEKGERFEKT-FAAELVAVAHLR--HRN 169
+LGSGGFG VY + SD VA+K +++ GE T E+V + +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL W D +L+ + P D F + L E + + A+
Sbjct: 71 VIRLLDWFERPDSFVLILE-RPEPVQDLFDF-----ITERGALQEELARSFFWQVLEAVR 124
Query: 230 YLHEQLETQIIHRDVKTSNVMLD-SQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
+ H ++HRD+K N+++D ++ +L DFG L+ +
Sbjct: 125 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---------------- 165
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346
T GT Y PPE + + V+S GI++ ++V G D+ + D+ I+
Sbjct: 166 --YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII 217
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 40/238 (16%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKC-----LAEKGERFEKT-FAAELVAVAHLRH--RN 169
+LGSGGFG VY + SD VA+K +++ GE T E+V + +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL W D +L+ + P D F + L E + + A+
Sbjct: 76 VIRLLDWFERPDSFVLILE-RPEPVQDLFDF-----ITERGALQEELARSFFWQVLEAVR 129
Query: 230 YLHEQLETQIIHRDVKTSNVMLD-SQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
+ H ++HRD+K N+++D ++ +L DFG L+ +
Sbjct: 130 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---------------- 170
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346
T GT Y PPE + + V+S GI++ ++V G D+ + D+ I+
Sbjct: 171 --YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII 222
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 94/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ D GLAR + E+
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEM--------------- 179
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 180 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 87/205 (42%), Gaps = 30/205 (14%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ LA T ++
Sbjct: 124 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLARH-TDDEM 179
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG-----------Q 723
AT R+ + +M D++S G ++ E++TG Q
Sbjct: 180 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
Query: 724 MAVDFRL---PEGLLVKRVHEFEAR 745
+ + RL P L+K++ AR
Sbjct: 232 LKLILRLVGTPGAELLKKISSESAR 256
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 94/219 (42%), Gaps = 36/219 (16%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKG--ERFEKTFAAELVAVAHLRHRNLVRLRGW 176
LGSG +G+V A+K + + E+ + L H N+++L +
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104
Query: 177 CVHEDQLLLVYD-YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQL 235
+ LV + Y D ++ R N AA II+ + + + YLH+
Sbjct: 105 FEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV--------IIKQVLSGVTYLHKH- 155
Query: 236 ETQIIHRDVKTSNVMLDSQYN---ARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETT 292
I+HRD+K N++L+S+ ++ DFGL+ E++ + + R
Sbjct: 156 --NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERL-------------- 199
Query: 293 RIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
GT Y+ PE +K K DV+S G+++ +++G
Sbjct: 200 ---GTAYYIAPEVLRKK--YDEKCDVWSIGVILFILLAG 233
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 94/240 (39%), Gaps = 45/240 (18%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF--EKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG +G V A G VAVK L+ + K EL + H++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 177 CVHEDQLLLVYDYMPNRSLDR---------VLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
+ P RSL+ ++ N+ L + + +I +
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
L Y+H IIHRD+K SN+ ++ ++ D GLAR + E+
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEM--------------- 179
Query: 288 LAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347
T T Y PE D++S G ++ E+++GR T DQ+ L+
Sbjct: 180 ----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 87/205 (42%), Gaps = 30/205 (14%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHN-NHRIGHSILQ 614
R EL+ L ++H N++ L T + +++ +++HL+ + N+ + L
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 615 WHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674
H +I + + Y+H + +IHR++ S + ++ D ++ LA T ++
Sbjct: 124 DDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLARH-TDDEM 179
Query: 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG-----------Q 723
AT R+ + +M D++S G ++ E++TG Q
Sbjct: 180 TGYVATRWYRAPEIMLNWM--------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
Query: 724 MAVDFRL---PEGLLVKRVHEFEAR 745
+ + RL P L+K++ AR
Sbjct: 232 LKLILRLVGTPGAELLKKISSESAR 256
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 104/235 (44%), Gaps = 55/235 (23%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKC--LAEKGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
+GSGG KV++ VL + A+K L E + ++ E+ + L+
Sbjct: 36 IGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ--------- 85
Query: 177 CVHEDQLLLVYDYMPNRSLDRVLFRRPE--NLEAAAPLN-------WEQRKKIIRGLAAA 227
H D+++ +YDY D+ ++ E N++ + L WE RK + + A
Sbjct: 86 --HSDKIIRLYDY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEA 139
Query: 228 LHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFH 287
+H +H+ I+H D+K +N ++ +L DFG+A ++ + ++ S
Sbjct: 140 VHTIHQH---GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKDSQV------ 189
Query: 288 LAETTRIGGTIGYLPPESFQKGSVA----------TAKSDVFSFGIVVLEVVSGR 332
GT+ Y+PPE+ + S + + KSDV+S G ++ + G+
Sbjct: 190 --------GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 40/238 (16%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKC-----LAEKGERFEKT-FAAELVAVAHLR--HRN 169
+LGSGGFG VY + SD VA+K +++ GE T E+V + +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
++RL W D +L+ + P D F + L E + + A+
Sbjct: 71 VIRLLDWFERPDSFVLILE-RPEPVQDLFDF-----ITERGALQEELARSFFWQVLEAVR 124
Query: 230 YLHEQLETQIIHRDVKTSNVMLD-SQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
+ H ++HRD+K N+++D ++ +L DFG L+ +
Sbjct: 125 HCH---NXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---------------- 165
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346
T GT Y PPE + + V+S GI++ ++V G D+ + D+ I+
Sbjct: 166 --YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII 217
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 96/229 (41%), Gaps = 40/229 (17%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRL----- 173
LG GG G V+ AV VA+K + + K E+ + L H N+V++
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 174 ---------RGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGL 224
G + + +V +YM L VL PL E + + L
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVL--------EQGPLLEEHARLFMYQL 129
Query: 225 AAALHYLHEQLETQIIHRDVKTSNVMLDSQ-YNARLGDFGLARWLEHELQYQMRTSSARN 283
L Y+H ++HRD+K +N+ ++++ ++GDFGLAR ++ +
Sbjct: 130 LRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMD----------PHYS 176
Query: 284 HQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
H+ HL+E T Y P + T D+++ G + E+++G+
Sbjct: 177 HKGHLSEGLV---TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 92/214 (42%), Gaps = 36/214 (16%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAEL---VAVAHLRHR--NLVRL 173
LG G F V + + S G A K L K R + AE+ +AV L ++ L
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFL--KKRRRGQDCRAEILHEIAVLELAKSCPRVINL 94
Query: 174 RGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHE 233
+ +++L+ +Y + + E A ++ ++I+ + ++YLH+
Sbjct: 95 HEVYENTSEIILILEYAAGGEIFSLCLP-----ELAEMVSENDVIRLIKQILEGVYYLHQ 149
Query: 234 QLETQIIHRDVKTSNVMLDSQY---NARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
I+H D+K N++L S Y + ++ DFG++R + H E
Sbjct: 150 N---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA-----------------CE 189
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIV 324
I GT YL PE + TA +D+++ GI+
Sbjct: 190 LREIMGTPEYLAPEILNYDPITTA-TDMWNIGII 222
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 621 IIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKAT 680
+IK + + YLH+ ++H ++ I L + P LG + +F GH
Sbjct: 136 LIKQILEGVYYLHQN---NIVHLDLKPQNILLS-SIYP-LGDIKIVDFGMSRKIGHACEL 190
Query: 681 SGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
R + G Y++PE + T+ D+++ G++ ++T
Sbjct: 191 ---REIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLT 228
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 99/218 (45%), Gaps = 23/218 (10%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAE-KGERFEKTFAAELVAVAHLRHRNLVRLRG 175
+ +G G +G V A T VA+K ++ + + + + E+ + RH N++ +R
Sbjct: 49 QYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRD 108
Query: 176 WCVHEDQLLLVYD-YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQ 234
+ L + D Y+ ++ L++ ++ + + +I+RGL Y+H
Sbjct: 109 -ILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLK----YIHS- 162
Query: 235 LETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRI 294
++HRD+K SN+++++ + ++ DFGLAR + E +H L E
Sbjct: 163 --ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPE----------HDHTGFLTEXV-- 208
Query: 295 GGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
T Y PE T D++S G ++ E++S R
Sbjct: 209 -ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
Score = 32.7 bits (73), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 43/221 (19%), Positives = 93/221 (42%), Gaps = 32/221 (14%)
Query: 515 FSESQRVAEMDFGTAYQGFLDNH---QYVLVKRLGMSKCPALRTRFSNELQNLARLRHRN 571
+++ Q + E +G + +H V +K++ + R E+Q L R RH N
Sbjct: 45 YTQLQYIGEGAYGMVSSAY--DHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHEN 102
Query: 572 LVQL-----CGWCTEQGEMLVIYDYSAT---RILSHLLFHNNHRIGHSILQWHHRYNIIK 623
++ + ++ ++ D T ++L N+H + Y I++
Sbjct: 103 VIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHIC-------YFLYQILR 155
Query: 624 SLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683
L Y+H + V+HR++ S + ++ + ++ F LA + +H H +
Sbjct: 156 GLK----YIH---SANVLHRDLKPSNLLINTTCDLKICDFGLAR-IADPEHDHTGFLTEX 207
Query: 684 RSVRGIFGYMSPE-YIESGEATSMADVYSFGVVVLEVVTGQ 723
+ R Y +PE + S T D++S G ++ E+++ +
Sbjct: 208 VATR---WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 92/224 (41%), Gaps = 41/224 (18%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHRNLVRL 173
VLG G FGKV + + AVK L + + + E T + V + L +L
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 86
Query: 174 RGWCVHEDQLLLVYDYMPNRSLDRVL-----FRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
D+L V +Y+ L + F+ P + AA + A L
Sbjct: 87 HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEI------------AIGL 134
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
+L + II+RD+K NVMLDS+ + ++ DFG+ + + +
Sbjct: 135 FFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGM----------------CKENIWDG 175
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
T GT Y+ PE + D ++FG+++ E+++G+
Sbjct: 176 VTTKXFCGTPDYIAPEIIAYQPYGKS-VDWWAFGVLLYEMLAGQ 218
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 16/118 (13%)
Query: 219 KIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRT 278
KI + AL +LH +L +IHRDVK SNV++++ + DFG++ +L ++ +
Sbjct: 140 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDI-- 195
Query: 279 SSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336
A + E RI PE QKG + KSD++S GI +E+ R D
Sbjct: 196 -DAGCKPYXAPE--RIN-------PELNQKG--YSVKSDIWSLGITXIELAILRFPYD 241
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 89/217 (41%), Gaps = 29/217 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF---EKTFAAELVAVAHLRHRNLVRLRG 175
+GSG +G V A VAVK L+ + +T+ EL + HL+H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGLLD 94
Query: 176 WCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQL 235
+ D+ + ++ N+ + L+ E + ++ L L Y+H
Sbjct: 95 VFTPATS---IEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHS-- 149
Query: 236 ETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIG 295
IIHRD+K SNV ++ R+ DFGLAR + E+ T
Sbjct: 150 -AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEM-------------------TGYV 189
Query: 296 GTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
T Y PE D++S G ++ E++ G+
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 88/220 (40%), Gaps = 32/220 (14%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK--GERFEKTFAAELVAVAHLRHRNLVRLR 174
E LG G F V R + G A K + K R + E L+H N+VRL
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 69
Query: 175 GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQ 234
E LV+D + L + R EA A I+ + ++++ H
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADA-------SHCIQQILESVNHCHL- 121
Query: 235 LETQIIHRDVKTSNVMLDSQYNA---RLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
I+HRD+K N++L S+ +L DFGLA + + F A
Sbjct: 122 --NGIVHRDLKPENLLLASKSKGAAVKLADFGLA----------IEVQGDQQAWFGFA-- 167
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
GT GYL PE +K D+++ G+++ ++ G
Sbjct: 168 ----GTPGYLSPEVLRKDPYGKP-VDMWACGVILYILLVG 202
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 100/231 (43%), Gaps = 47/231 (20%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK----GERFEKTFA----AELVAVAHLRHR 168
+ LGSG G+V A VA+K ++++ G E A E+ + L H
Sbjct: 15 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 74
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
+++++ + ED +++ D+V+ + EA L + Q + A+
Sbjct: 75 CIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLK-EATCKLYFYQ-------MLLAV 126
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYN---ARLGDFGLARWL-EHELQYQMRTSSARNH 284
YLHE IIHRD+K NV+L SQ ++ DFG ++ L E L MRT
Sbjct: 127 QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---MRT------ 174
Query: 285 QFHLAETTRIGGTIGYLPPESFQKGSVATA----KSDVFSFGIVVLEVVSG 331
+ GT YL PE SV TA D +S G+++ +SG
Sbjct: 175 ---------LCGTPTYLAPEVLV--SVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 100/231 (43%), Gaps = 47/231 (20%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK----GERFEKTFA----AELVAVAHLRHR 168
+ LGSG G+V A VA+K ++++ G E A E+ + L H
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
+++++ + ED +++ D+V+ + EA L + Q + A+
Sbjct: 76 CIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLK-EATCKLYFYQ-------MLLAV 127
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYN---ARLGDFGLARWL-EHELQYQMRTSSARNH 284
YLHE IIHRD+K NV+L SQ ++ DFG ++ L E L MRT
Sbjct: 128 QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---MRT------ 175
Query: 285 QFHLAETTRIGGTIGYLPPESFQKGSVATA----KSDVFSFGIVVLEVVSG 331
+ GT YL PE SV TA D +S G+++ +SG
Sbjct: 176 ---------LCGTPTYLAPEVLV--SVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 100/231 (43%), Gaps = 47/231 (20%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK----GERFEKTFA----AELVAVAHLRHR 168
+ LGSG G+V A VA+K ++++ G E A E+ + L H
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
+++++ + ED +++ D+V+ + EA L + Q + A+
Sbjct: 76 CIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLK-EATCKLYFYQ-------MLLAV 127
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYN---ARLGDFGLARWL-EHELQYQMRTSSARNH 284
YLHE IIHRD+K NV+L SQ ++ DFG ++ L E L MRT
Sbjct: 128 QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---MRT------ 175
Query: 285 QFHLAETTRIGGTIGYLPPESFQKGSVATA----KSDVFSFGIVVLEVVSG 331
+ GT YL PE SV TA D +S G+++ +SG
Sbjct: 176 ---------LCGTPTYLAPEVLV--SVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 88/217 (40%), Gaps = 29/217 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF---EKTFAAELVAVAHLRHRNLVRLRG 175
+GSG +G V A VAVK L+ + +T+ EL + HL+H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGLLD 94
Query: 176 WCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQL 235
+ D+ + ++ N+ L+ E + ++ L L Y+H
Sbjct: 95 VFTPATS---IEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS-- 149
Query: 236 ETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIG 295
IIHRD+K SNV ++ R+ DFGLAR + E+ T
Sbjct: 150 -AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEM-------------------TGYV 189
Query: 296 GTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
T Y PE D++S G ++ E++ G+
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 87/220 (39%), Gaps = 32/220 (14%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK--GERFEKTFAAELVAVAHLRHRNLVRLR 174
E LG G F V R V G A + K R + E L+H N+VRL
Sbjct: 17 EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 76
Query: 175 GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQ 234
E L++D + L + R EA A I+ + A+ + H+
Sbjct: 77 DSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADA-------SHCIQQILEAVLHCHQM 129
Query: 235 LETQIIHRDVKTSNVMLDSQYNA---RLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
++HR++K N++L S+ +L DFGLA +E E Q
Sbjct: 130 ---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWF--------------- 171
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
GT GYL PE +K D+++ G+++ ++ G
Sbjct: 172 -GFAGTPGYLSPEVLRKDPYGKP-VDLWACGVILYILLVG 209
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 78/175 (44%), Gaps = 19/175 (10%)
Query: 553 LRTRFSNELQNLAR----LRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRI 608
L R +L+ AR L+H N+V+L +E+G +I+D + LF + +
Sbjct: 49 LSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDL----VTGGELFEDI--V 102
Query: 609 GHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEF 668
+ I+ + A+L+ H+ V+HRN+ + L + + + LA+F
Sbjct: 103 AREYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKL--KGAAVKLADF 157
Query: 669 -LTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
L G ++A G G GY+SPE + D+++ GV++ ++ G
Sbjct: 158 GLAIEVEGEQQAWFG---FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 100/231 (43%), Gaps = 47/231 (20%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK----GERFEKTFA----AELVAVAHLRHR 168
+ LGSG G+V A VA+K ++++ G E A E+ + L H
Sbjct: 22 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 81
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
+++++ + ED +++ D+V+ + EA L + Q + A+
Sbjct: 82 CIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLK-EATCKLYFYQ-------MLLAV 133
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYN---ARLGDFGLARWL-EHELQYQMRTSSARNH 284
YLHE IIHRD+K NV+L SQ ++ DFG ++ L E L MRT
Sbjct: 134 QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---MRT------ 181
Query: 285 QFHLAETTRIGGTIGYLPPESFQKGSVATA----KSDVFSFGIVVLEVVSG 331
+ GT YL PE SV TA D +S G+++ +SG
Sbjct: 182 ---------LCGTPTYLAPEVLV--SVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 100/231 (43%), Gaps = 47/231 (20%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK----GERFEKTFA----AELVAVAHLRHR 168
+ LGSG G+V A VA+K ++++ G E A E+ + L H
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
+++++ + ED +++ D+V+ + EA L + Q + A+
Sbjct: 76 CIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLK-EATCKLYFYQ-------MLLAV 127
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYN---ARLGDFGLARWL-EHELQYQMRTSSARNH 284
YLHE IIHRD+K NV+L SQ ++ DFG ++ L E L MRT
Sbjct: 128 QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---MRT------ 175
Query: 285 QFHLAETTRIGGTIGYLPPESFQKGSVATA----KSDVFSFGIVVLEVVSG 331
+ GT YL PE SV TA D +S G+++ +SG
Sbjct: 176 ---------LCGTPTYLAPEVLV--SVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 88/217 (40%), Gaps = 29/217 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF---EKTFAAELVAVAHLRHRNLVRLRG 175
+GSG +G V A VAVK L+ + +T+ EL + HL+H N++ L
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGLLD 86
Query: 176 WCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQL 235
+ D+ + ++ N+ L+ E + ++ L L Y+H
Sbjct: 87 VFTPATS---IEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS-- 141
Query: 236 ETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIG 295
IIHRD+K SNV ++ R+ DFGLAR + E+ T
Sbjct: 142 -AGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEM-------------------TGYV 181
Query: 296 GTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
T Y PE D++S G ++ E++ G+
Sbjct: 182 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 92/224 (41%), Gaps = 41/224 (18%)
Query: 118 VLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHRNLVRL 173
VLG G FGKV + + AVK L + + + E T + V + L +L
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407
Query: 174 RGWCVHEDQLLLVYDYMPNRSLDRVL-----FRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
D+L V +Y+ L + F+ P + AA + A L
Sbjct: 408 HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEI------------AIGL 455
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
+L + II+RD+K NVMLDS+ + ++ DFG+ + + +
Sbjct: 456 FFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGM----------------CKENIWDG 496
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
T GT Y+ PE + D ++FG+++ E+++G+
Sbjct: 497 VTTKXFCGTPDYIAPEIIAYQPYGKS-VDWWAFGVLLYEMLAGQ 539
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 88/220 (40%), Gaps = 32/220 (14%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK--GERFEKTFAAELVAVAHLRHRNLVRLR 174
E LG G F V R + G A K + K R + E L+H N+VRL
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 69
Query: 175 GWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQ 234
E LV+D + L + R EA A I+ + ++++ H
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADA-------SHCIQQILESVNHCHL- 121
Query: 235 LETQIIHRDVKTSNVMLDSQYNA---RLGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
I+HRD+K N++L S+ +L DFGLA + + F A
Sbjct: 122 --NGIVHRDLKPENLLLASKSKGAAVKLADFGLA----------IEVQGDQQAWFGFA-- 167
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
GT GYL PE +K D+++ G+++ ++ G
Sbjct: 168 ----GTPGYLSPEVLRKDPYGKP-VDMWACGVILYILLVG 202
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 105/238 (44%), Gaps = 49/238 (20%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGER--FEKTFAAELVAVAHLRHRNLVRLR 174
E +G G +G+V+R + G VAVK + + E+ F +T E+ LRH N++
Sbjct: 14 ECVGKGRYGEVWRGLW--HGESVAVKIFSSRDEQSWFRET---EIYNTVLLRHDNIL--- 65
Query: 175 GWCVHE-------DQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAA 227
G+ + QL L+ Y + SL L R + LE L ++ A
Sbjct: 66 GFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQR--QTLEPHLAL------RLAVSAACG 117
Query: 228 LHYLHEQL-----ETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSAR 282
L +LH ++ + I HRD K+ NV++ S + D GLA + H S
Sbjct: 118 LAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA--VMH---------SQG 166
Query: 283 NHQFHLAETTRIGGTIGYLPP----ESFQKGSVATAK-SDVFSFGIVVLEVVSGRRAV 335
+ + R+ GT Y+ P E + + K +D+++FG+V+ E+ RR +
Sbjct: 167 SDYLDIGNNPRV-GTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI--ARRTI 221
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 219 KIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRT 278
+I+RGL Y+H ++HRD+K SN++L++ + ++ DFGLAR
Sbjct: 136 QILRGLK----YIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLAR------------ 176
Query: 279 SSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
A H T T Y PE T D++S G ++ E++S R
Sbjct: 177 -VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 528 TAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQL-----CGWCTEQ 582
+AY N V +K++ + R E++ L R RH N++ + +
Sbjct: 45 SAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQM 102
Query: 583 GEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIH 642
++ ++ D T + + L H I + Y I++ L Y+H + V+H
Sbjct: 103 KDVYIVQDLMETDL--YKLLKTQHLSNDHICYF--LYQILRGLK----YIH---SANVLH 151
Query: 643 RNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPE-YIESG 701
R++ S + L+ + ++ F LA + DH H + + R Y +PE + S
Sbjct: 152 RDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEYVATR---WYRAPEIMLNSK 207
Query: 702 EATSMADVYSFGVVVLEVVTGQ 723
T D++S G ++ E+++ +
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 219 KIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRT 278
+I+RGL Y+H ++HRD+K SN++L++ + ++ DFGLAR
Sbjct: 132 QILRGLK----YIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLAR------------ 172
Query: 279 SSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
A H T T Y PE T D++S G ++ E++S R
Sbjct: 173 -VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 82/190 (43%), Gaps = 21/190 (11%)
Query: 540 VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQL-----CGWCTEQGEMLVIYDYSAT 594
V +K++ + R E++ L R RH N++ + + ++ ++ D T
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 595 RILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDP 654
+ + L H I + Y I++ L Y+H + V+HR++ S + L+
Sbjct: 111 DL--YKLLKTQHLSNDHICYF--LYQILRGLK----YIH---SANVLHRDLKPSNLLLNT 159
Query: 655 DMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPE-YIESGEATSMADVYSFG 713
+ ++ F LA + DH H + + R Y +PE + S T D++S G
Sbjct: 160 TXDLKICDFGLAR-VADPDHDHTGFLTEYVATR---WYRAPEIMLNSKGYTKSIDIWSVG 215
Query: 714 VVVLEVVTGQ 723
++ E+++ +
Sbjct: 216 CILAEMLSNR 225
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 219 KIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRT 278
+I+RGL Y+H ++HRD+K SN++L++ + ++ DFGLAR
Sbjct: 132 QILRGLK----YIHS---ANVLHRDLKPSNLLLNTTXDLKIXDFGLAR------------ 172
Query: 279 SSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
A H T T Y PE T D++S G ++ E++S R
Sbjct: 173 -VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 82/190 (43%), Gaps = 21/190 (11%)
Query: 540 VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQL-----CGWCTEQGEMLVIYDYSAT 594
V +K++ + R E++ L R RH N++ + + ++ ++ D T
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 595 RILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDP 654
+ + L H I + Y I++ L Y+H + V+HR++ S + L+
Sbjct: 111 DL--YKLLKTQHLSNDHICYF--LYQILRGLK----YIH---SANVLHRDLKPSNLLLNT 159
Query: 655 DMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPE-YIESGEATSMADVYSFG 713
+ ++ F LA + DH H + + R Y +PE + S T D++S G
Sbjct: 160 TXDLKIXDFGLAR-VADPDHDHTGFLTEYVATR---WYRAPEIMLNSKGYTKSIDIWSVG 215
Query: 714 VVVLEVVTGQ 723
++ E+++ +
Sbjct: 216 CILAEMLSNR 225
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 219 KIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRT 278
+I+RGL Y+H ++HRD+K SN++L++ + ++ DFGLAR
Sbjct: 136 QILRGLK----YIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLAR------------ 176
Query: 279 SSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
A H T T Y PE T D++S G ++ E++S R
Sbjct: 177 -VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 43/224 (19%), Positives = 93/224 (41%), Gaps = 22/224 (9%)
Query: 507 EIISATNNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSKCPALRTRFSNELQNLA 565
++ ++ + E +G + + N V +K++ + R E++ L
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL 80
Query: 566 RLRHRNLVQL-----CGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYN 620
R RH N++ + + ++ ++ D T + + L H I + Y
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDL--YKLLKCQHLSNDHICYF--LYQ 136
Query: 621 IIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKAT 680
I++ L Y+H + V+HR++ S + L+ + ++ F LA + DH H
Sbjct: 137 ILRGLK----YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFL 188
Query: 681 SGNRSVRGIFGYMSPE-YIESGEATSMADVYSFGVVVLEVVTGQ 723
+ + R Y +PE + S T D++S G ++ E+++ +
Sbjct: 189 TEYVATR---WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 219 KIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRT 278
+I+RGL Y+H ++HRD+K SN++L++ + ++ DFGLAR
Sbjct: 132 QILRGLK----YIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLAR------------ 172
Query: 279 SSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
A H T T Y PE T D++S G ++ E++S R
Sbjct: 173 -VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 82/190 (43%), Gaps = 21/190 (11%)
Query: 540 VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQL-----CGWCTEQGEMLVIYDYSAT 594
V +K++ + R E++ L R RH N++ + + ++ ++ D T
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 595 RILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDP 654
+ + L H I + Y I++ L Y+H + V+HR++ S + L+
Sbjct: 111 DL--YKLLKTQHLSNDHICYF--LYQILRGLK----YIH---SANVLHRDLKPSNLLLNT 159
Query: 655 DMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPE-YIESGEATSMADVYSFG 713
+ ++ F LA + DH H + + R Y +PE + S T D++S G
Sbjct: 160 TXDLKICDFGLAR-VADPDHDHTGFLTEYVATR---WYRAPEIMLNSKGYTKSIDIWSVG 215
Query: 714 VVVLEVVTGQ 723
++ E+++ +
Sbjct: 216 CILAEMLSNR 225
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 219 KIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRT 278
+I+RGL Y+H ++HRD+K SN++L++ + ++ DFGLAR
Sbjct: 130 QILRGLK----YIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLAR------------ 170
Query: 279 SSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
A H T T Y PE T D++S G ++ E++S R
Sbjct: 171 -VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 528 TAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQL-----CGWCTEQ 582
+AY N V +K++ + R E++ L R RH N++ + +
Sbjct: 39 SAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQM 96
Query: 583 GEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIH 642
++ ++ D T + + L H I + Y I++ L Y+H + V+H
Sbjct: 97 KDVYIVQDLMETDL--YKLLKTQHLSNDHICYF--LYQILRGLK----YIH---SANVLH 145
Query: 643 RNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPE-YIESG 701
R++ S + L+ + ++ F LA + DH H + + R Y +PE + S
Sbjct: 146 RDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATR---WYRAPEIMLNSK 201
Query: 702 EATSMADVYSFGVVVLEVVTGQ 723
T D++S G ++ E+++ +
Sbjct: 202 GYTKSIDIWSVGCILAEMLSNR 223
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 219 KIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRT 278
+I+RGL Y+H ++HRD+K SN++L++ + ++ DFGLAR
Sbjct: 136 QILRGLK----YIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLAR------------ 176
Query: 279 SSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
A H T T Y PE T D++S G ++ E++S R
Sbjct: 177 -VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 528 TAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQL-----CGWCTEQ 582
+AY N V +K++ + R E++ L R RH N++ + +
Sbjct: 45 SAYDNL--NKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDIIRAPTIEQM 102
Query: 583 GEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIH 642
++ ++ D T + + L H I + Y I++ L Y+H + V+H
Sbjct: 103 KDVYIVQDLMETDL--YKLLKTQHLSNDHICYF--LYQILRGLK----YIH---SANVLH 151
Query: 643 RNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPE-YIESG 701
R++ S + L+ + ++ F LA + DH H + + R Y +PE + S
Sbjct: 152 RDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEYVATR---WYRAPEIMLNSK 207
Query: 702 EATSMADVYSFGVVVLEVVTGQ 723
T D++S G ++ E+++ +
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNR 229
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 219 KIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRT 278
+I+RGL Y+H ++HRD+K SN++L++ + ++ DFGLAR
Sbjct: 152 QILRGLK----YIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLAR------------ 192
Query: 279 SSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
A H T T Y PE T D++S G ++ E++S R
Sbjct: 193 -VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
Score = 32.7 bits (73), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 40/220 (18%), Positives = 93/220 (42%), Gaps = 14/220 (6%)
Query: 507 EIISATNNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSKCPALRTRFSNELQNLA 565
++ ++ + E +G + + N V +K++ + R E++ L
Sbjct: 37 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL 96
Query: 566 RLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSI-LQWHHRYNIIKS 624
R RH N++ + + I +++HL+ + +++ + L H +
Sbjct: 97 RFRHENIIGI----NDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQ 152
Query: 625 LASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNR 684
+ + Y+H + V+HR++ S + L+ + ++ F LA + DH H +
Sbjct: 153 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEYV 208
Query: 685 SVRGIFGYMSPE-YIESGEATSMADVYSFGVVVLEVVTGQ 723
+ R Y +PE + S T D++S G ++ E+++ +
Sbjct: 209 ATR---WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 219 KIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRT 278
+I+RGL Y+H ++HRD+K SN++L++ + ++ DFGLAR
Sbjct: 132 QILRGLK----YIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLAR------------ 172
Query: 279 SSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
A H T T Y PE T D++S G ++ E++S R
Sbjct: 173 -VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 82/190 (43%), Gaps = 21/190 (11%)
Query: 540 VLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQL-----CGWCTEQGEMLVIYDYSAT 594
V +K++ + R E++ L R RH N++ + + ++ ++ D T
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 595 RILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDP 654
+ + L H I + Y I++ L Y+H + V+HR++ S + L+
Sbjct: 111 DL--YKLLKTQHLSNDHICYF--LYQILRGLK----YIH---SANVLHRDLKPSNLLLNT 159
Query: 655 DMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPE-YIESGEATSMADVYSFG 713
+ ++ F LA + DH H + + R Y +PE + S T D++S G
Sbjct: 160 TCDLKICDFGLAR-VADPDHDHTGFLTEYVATR---WYRAPEIMLNSKGYTKSIDIWSVG 215
Query: 714 VVVLEVVTGQ 723
++ E+++ +
Sbjct: 216 CILAEMLSNR 225
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 219 KIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRT 278
+I+RGL Y+H ++HRD+K SN++L++ + ++ DFGLAR
Sbjct: 137 QILRGLK----YIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLAR------------ 177
Query: 279 SSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
A H T T Y PE T D++S G ++ E++S R
Sbjct: 178 -VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 528 TAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQL-----CGWCTEQ 582
+AY N V +K++ + R E++ L R RH N++ + +
Sbjct: 46 SAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQM 103
Query: 583 GEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIH 642
++ ++ D T + + L H I + Y I++ L Y+H + V+H
Sbjct: 104 KDVYIVQDLMETDL--YKLLKTQHLSNDHICYF--LYQILRGLK----YIH---SANVLH 152
Query: 643 RNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPE-YIESG 701
R++ S + L+ + ++ F LA + DH H + + R Y +PE + S
Sbjct: 153 RDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATR---WYRAPEIMLNSK 208
Query: 702 EATSMADVYSFGVVVLEVVTGQ 723
T D++S G ++ E+++ +
Sbjct: 209 GYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 219 KIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRT 278
+I+RGL Y+H ++HRD+K SN++L++ + ++ DFGLAR
Sbjct: 138 QILRGLK----YIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLAR------------ 178
Query: 279 SSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
A H T T Y PE T D++S G ++ E++S R
Sbjct: 179 -VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 528 TAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQL-----CGWCTEQ 582
+AY N V +K++ + R E++ L R RH N++ + +
Sbjct: 47 SAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQM 104
Query: 583 GEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIH 642
++ ++ D T + + L H I + Y I++ L Y+H + V+H
Sbjct: 105 KDVYIVQDLMETDL--YKLLKTQHLSNDHICYF--LYQILRGLK----YIH---SANVLH 153
Query: 643 RNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPE-YIESG 701
R++ S + L+ + ++ F LA + DH H + + R Y +PE + S
Sbjct: 154 RDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATR---WYRAPEIMLNSK 209
Query: 702 EATSMADVYSFGVVVLEVVTGQ 723
T D++S G ++ E+++ +
Sbjct: 210 GYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 219 KIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRT 278
+I+RGL Y+H ++HRD+K SN++L++ + ++ DFGLAR
Sbjct: 129 QILRGLK----YIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLAR------------ 169
Query: 279 SSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
A H T T Y PE T D++S G ++ E++S R
Sbjct: 170 -VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 528 TAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQL-----CGWCTEQ 582
+AY N V +K++ + R E++ L R RH N++ + +
Sbjct: 38 SAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQM 95
Query: 583 GEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIH 642
++ ++ D T + + L H I + Y I++ L Y+H + V+H
Sbjct: 96 KDVYIVQDLMETDL--YKLLKTQHLSNDHICYF--LYQILRGLK----YIH---SANVLH 144
Query: 643 RNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPE-YIESG 701
R++ S + L+ + ++ F LA + DH H + + R Y +PE + S
Sbjct: 145 RDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATR---WYRAPEIMLNSK 200
Query: 702 EATSMADVYSFGVVVLEVVTGQ 723
T D++S G ++ E+++ +
Sbjct: 201 GYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 219 KIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRT 278
+I+RGL Y+H ++HRD+K SN++L++ + ++ DFGLAR
Sbjct: 136 QILRGLK----YIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLAR------------ 176
Query: 279 SSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
A H T T Y PE T D++S G ++ E++S R
Sbjct: 177 -VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 528 TAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQL-----CGWCTEQ 582
+AY N V +K++ + R E++ L R RH N++ + +
Sbjct: 45 SAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQM 102
Query: 583 GEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIH 642
++ ++ D T + + L H I + Y I++ L Y+H + V+H
Sbjct: 103 KDVYIVQDLMETDL--YKLLKTQHLSNDHICYF--LYQILRGLK----YIH---SANVLH 151
Query: 643 RNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPE-YIESG 701
R++ S + L+ + ++ F LA + DH H + + R Y +PE + S
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATR---WYRAPEIMLNSK 207
Query: 702 EATSMADVYSFGVVVLEVVTGQ 723
T D++S G ++ E+++ +
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 219 KIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRT 278
+I+RGL Y+H ++HRD+K SN++L++ + ++ DFGLAR
Sbjct: 130 QILRGLK----YIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLAR------------ 170
Query: 279 SSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
A H T T Y PE T D++S G ++ E++S R
Sbjct: 171 -VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 528 TAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQL-----CGWCTEQ 582
+AY N V +K++ + R E++ L R RH N++ + +
Sbjct: 39 SAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQM 96
Query: 583 GEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIH 642
++ ++ D T + + L H I + Y I++ L Y+H + V+H
Sbjct: 97 KDVYIVQDLMETDL--YKLLKTQHLSNDHICYF--LYQILRGLK----YIH---SANVLH 145
Query: 643 RNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPE-YIESG 701
R++ S + L+ + ++ F LA + DH H + + R Y +PE + S
Sbjct: 146 RDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATR---WYRAPEIMLNSK 201
Query: 702 EATSMADVYSFGVVVLEVVTGQ 723
T D++S G ++ E+++ +
Sbjct: 202 GYTKSIDIWSVGCILAEMLSNR 223
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 219 KIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRT 278
+I+RGL Y+H ++HRD+K SN++L++ + ++ DFGLAR
Sbjct: 140 QILRGLK----YIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLAR------------ 180
Query: 279 SSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
A H T T Y PE T D++S G ++ E++S R
Sbjct: 181 -VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 83/194 (42%), Gaps = 21/194 (10%)
Query: 536 NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQL-----CGWCTEQGEMLVIYD 590
N V +K++ + R E++ L R RH N++ + + ++ ++ D
Sbjct: 55 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 114
Query: 591 YSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAI 650
T + + L H I + Y I++ L Y+H + V+HR++ S +
Sbjct: 115 LMETDL--YKLLKTQHLSNDHICYF--LYQILRGLK----YIH---SANVLHRDLKPSNL 163
Query: 651 TLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPE-YIESGEATSMADV 709
L+ + ++ F LA + DH H + + R Y +PE + S T D+
Sbjct: 164 LLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATR---WYRAPEIMLNSKGYTKSIDI 219
Query: 710 YSFGVVVLEVVTGQ 723
+S G ++ E+++ +
Sbjct: 220 WSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 219 KIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRT 278
+I+RGL Y+H ++HRD+K SN++L++ + ++ DFGLAR
Sbjct: 132 QILRGLK----YIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLAR------------ 172
Query: 279 SSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
A H T T Y PE T D++S G ++ E++S R
Sbjct: 173 -VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 83/194 (42%), Gaps = 21/194 (10%)
Query: 536 NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQL-----CGWCTEQGEMLVIYD 590
N V +K++ + R E++ L R RH N++ + + ++ ++ D
Sbjct: 47 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 106
Query: 591 YSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAI 650
T + + L H I + Y I++ L Y+H + V+HR++ S +
Sbjct: 107 LMETDL--YKLLKTQHLSNDHICYF--LYQILRGLK----YIH---SANVLHRDLKPSNL 155
Query: 651 TLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPE-YIESGEATSMADV 709
L+ + ++ F LA + DH H + + R Y +PE + S T D+
Sbjct: 156 LLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATR---WYRAPEIMLNSKGYTKSIDI 211
Query: 710 YSFGVVVLEVVTGQ 723
+S G ++ E+++ +
Sbjct: 212 WSVGCILAEMLSNR 225
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 219 KIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRT 278
+I+RGL Y+H ++HRD+K SN++L++ + ++ DFGLAR
Sbjct: 136 QILRGLK----YIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLAR------------ 176
Query: 279 SSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
A H T T Y PE T D++S G ++ E++S R
Sbjct: 177 -VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 219 KIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRT 278
+I+RGL Y+H ++HRD+K SN++L++ + ++ DFGLAR
Sbjct: 134 QILRGLK----YIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLAR------------ 174
Query: 279 SSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
A H T T Y PE T D++S G ++ E++S R
Sbjct: 175 -VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 219 KIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRT 278
+I+RGL Y+H ++HRD+K SN++L++ + ++ DFGLAR
Sbjct: 134 QILRGLK----YIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLAR------------ 174
Query: 279 SSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
A H T T Y PE T D++S G ++ E++S R
Sbjct: 175 -VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 83/194 (42%), Gaps = 21/194 (10%)
Query: 536 NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQL-----CGWCTEQGEMLVIYD 590
N V +K++ + R E++ L R RH N++ + + ++ ++ D
Sbjct: 49 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 108
Query: 591 YSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAI 650
T + + L H I + Y I++ L Y+H + V+HR++ S +
Sbjct: 109 LMETDL--YKLLKTQHLSNDHICYF--LYQILRGLK----YIH---SANVLHRDLKPSNL 157
Query: 651 TLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPE-YIESGEATSMADV 709
L+ + ++ F LA + DH H + + R Y +PE + S T D+
Sbjct: 158 LLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATR---WYRAPEIMLNSKGYTKSIDI 213
Query: 710 YSFGVVVLEVVTGQ 723
+S G ++ E+++ +
Sbjct: 214 WSVGCILAEMLSNR 227
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 113/261 (43%), Gaps = 40/261 (15%)
Query: 75 KEHSGLFHDMEGVQMSEKVGGDNPRIFSY-AELYIGSNGFDEDEVLGSGGFGKVYRAVLP 133
+E S D EGV ++EK+ P + Y E++ ++ LG G FG+V+R
Sbjct: 44 REPSPKTEDNEGVLLTEKL---KPVDYEYREEVHWATHQLR----LGRGSFGEVHRMEDK 96
Query: 134 SDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNR 193
G AVK + R E A EL+A A L +V L G + + + +
Sbjct: 97 QTGFQCAVKKV-----RLEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGG 151
Query: 194 SLDRVLFRRPENLEAAAPLNWEQRKKIIRGLA-AALHYLHEQLETQIIHRDVKTSNVMLD 252
SL +++ + P E R G A L YLH + +I+H DVK NV+L
Sbjct: 152 SLGQLV-----KEQGCLP---EDRALYYLGQALEGLEYLHSR---RILHGDVKADNVLLS 200
Query: 253 SQ-YNARLGDFGLARWLEHE-LQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGS 310
S +A L DFG A L+ + L + T I GT ++ PE G
Sbjct: 201 SDGSHAALCDFGHAVCLQPDGLGKDLLTGD------------YIPGTETHMAPEVVL-GR 247
Query: 311 VATAKSDVFSFGIVVLEVVSG 331
AK DV+S ++L +++G
Sbjct: 248 SCDAKVDVWSSCCMMLHMLNG 268
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 219 KIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRT 278
+I+RGL Y+H ++HRD+K SN++L++ + ++ DFGLAR
Sbjct: 134 QILRGLK----YIHS---ANVLHRDLKPSNLLLNTTSDLKICDFGLAR------------ 174
Query: 279 SSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
A H T T Y PE T D++S G ++ E++S R
Sbjct: 175 -VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 219 KIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRT 278
+I+RGL Y+H ++HRD+K SN++L++ + ++ DFGLAR
Sbjct: 152 QILRGLK----YIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLAR------------ 192
Query: 279 SSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
A H T T Y PE T D++S G ++ E++S R
Sbjct: 193 -VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 43/224 (19%), Positives = 93/224 (41%), Gaps = 22/224 (9%)
Query: 507 EIISATNNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSKCPALRTRFSNELQNLA 565
++ ++ + E +G + + N V +K++ + R E++ L
Sbjct: 37 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL 96
Query: 566 RLRHRNLVQL-----CGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYN 620
R RH N++ + + ++ ++ D T + + L H I + Y
Sbjct: 97 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDL--YKLLKTQHLSNDHICYF--LYQ 152
Query: 621 IIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKAT 680
I++ L Y+H + V+HR++ S + L+ + ++ F LA + DH H
Sbjct: 153 ILRGLK----YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFL 204
Query: 681 SGNRSVRGIFGYMSPE-YIESGEATSMADVYSFGVVVLEVVTGQ 723
+ + R Y +PE + S T D++S G ++ E+++ +
Sbjct: 205 TEYVATR---WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 113/261 (43%), Gaps = 40/261 (15%)
Query: 75 KEHSGLFHDMEGVQMSEKVGGDNPRIFSY-AELYIGSNGFDEDEVLGSGGFGKVYRAVLP 133
+E S D EGV ++EK+ P + Y E++ ++ LG G FG+V+R
Sbjct: 63 REPSPKTEDNEGVLLTEKL---KPVDYEYREEVHWATHQLR----LGRGSFGEVHRMEDK 115
Query: 134 SDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNR 193
G AVK + R E A EL+A A L +V L G + + + +
Sbjct: 116 QTGFQCAVKKV-----RLEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGG 170
Query: 194 SLDRVLFRRPENLEAAAPLNWEQRKKIIRGLA-AALHYLHEQLETQIIHRDVKTSNVMLD 252
SL +++ + P E R G A L YLH + +I+H DVK NV+L
Sbjct: 171 SLGQLV-----KEQGCLP---EDRALYYLGQALEGLEYLHSR---RILHGDVKADNVLLS 219
Query: 253 SQ-YNARLGDFGLARWLEHE-LQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGS 310
S +A L DFG A L+ + L + T I GT ++ PE G
Sbjct: 220 SDGSHAALCDFGHAVCLQPDGLGKSLLTGD------------YIPGTETHMAPEVVL-GR 266
Query: 311 VATAKSDVFSFGIVVLEVVSG 331
AK DV+S ++L +++G
Sbjct: 267 SCDAKVDVWSSCCMMLHMLNG 287
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 20/114 (17%)
Query: 219 KIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRT 278
+I+RGL Y+H ++HRD+K SN++L++ + ++ DFGLAR + +
Sbjct: 136 QILRGLK----YIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD------- 181
Query: 279 SSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
+H L E T Y PE T D++S G ++ E++S R
Sbjct: 182 ---HDHTGFLXEXV---ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 85/202 (42%), Gaps = 23/202 (11%)
Query: 528 TAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQL-----CGWCTEQ 582
+AY N V +K++ + R E++ L R RH N++ + +
Sbjct: 45 SAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQM 102
Query: 583 GEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIH 642
++ ++ D T + + L H I + Y I++ L Y+H + V+H
Sbjct: 103 KDVYIVQDLMETDL--YKLLKTQHLSNDHICYF--LYQILRGLK----YIH---SANVLH 151
Query: 643 RNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPE-YIESG 701
R++ S + L+ + ++ F LA + DH H + R Y +PE + S
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLXEXVATR---WYRAPEIMLNSK 207
Query: 702 EATSMADVYSFGVVVLEVVTGQ 723
T D++S G ++ E+++ +
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 20/114 (17%)
Query: 219 KIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRT 278
+I+RGL Y+H ++HRD+K SN++L++ + ++ DFGLAR + +
Sbjct: 137 QILRGLK----YIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD------- 182
Query: 279 SSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
+H L E T Y PE T D++S G ++ E++S R
Sbjct: 183 ---HDHTGFLXEXV---ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 85/202 (42%), Gaps = 23/202 (11%)
Query: 528 TAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQL-----CGWCTEQ 582
+AY N V +K++ + R E++ L R RH N++ + +
Sbjct: 46 SAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQM 103
Query: 583 GEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIH 642
++ ++ D T + + L H I + Y I++ L Y+H + V+H
Sbjct: 104 KDVYIVQDLMETDL--YKLLKTQHLSNDHICYF--LYQILRGLK----YIH---SANVLH 152
Query: 643 RNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPE-YIESG 701
R++ S + L+ + ++ F LA + DH H + R Y +PE + S
Sbjct: 153 RDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLXEXVATR---WYRAPEIMLNSK 208
Query: 702 EATSMADVYSFGVVVLEVVTGQ 723
T D++S G ++ E+++ +
Sbjct: 209 GYTKSIDIWSVGCILAEMLSNR 230
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 106/252 (42%), Gaps = 38/252 (15%)
Query: 83 DMEGVQMSEKVGGDNPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVK 142
D EGV ++EK+ P + Y E + LG G FG+V+R G AVK
Sbjct: 50 DNEGVLLTEKL---KPVDYEYREEV---HWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVK 103
Query: 143 CLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRR 202
+ R E ELVA A L +V L G + + + + SL +++ +
Sbjct: 104 KV-----RLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQM 158
Query: 203 PENLEAAAPLNWEQRKKIIRGLA-AALHYLHEQLETQIIHRDVKTSNVMLDSQYN-ARLG 260
P E R G A L YLH + +I+H DVK NV+L S + A L
Sbjct: 159 -----GCLP---EDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALC 207
Query: 261 DFGLARWLEHE-LQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVF 319
DFG A L+ + L + T I GT ++ PE G AK D++
Sbjct: 208 DFGHALCLQPDGLGKSLLTGD------------YIPGTETHMAPEVVM-GKPCDAKVDIW 254
Query: 320 SFGIVVLEVVSG 331
S ++L +++G
Sbjct: 255 SSCCMMLHMLNG 266
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 97/241 (40%), Gaps = 45/241 (18%)
Query: 105 ELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAH 164
E+ + F+ +V+G G FG+V + + + A+K L ++E AE A
Sbjct: 68 EMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKIL----NKWEMLKRAE---TAC 120
Query: 165 LRHRNLVRLRGWC-----VH-----EDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNW 214
R V + G C +H E+ L LV DY L +L + + L
Sbjct: 121 FREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPE------ 174
Query: 215 EQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQY 274
+ + I + A+ +H+ +HRD+K NV+LD + RL DFG
Sbjct: 175 DMARFYIGEMVLAIDSIHQ---LHYVHRDIKPDNVLLDVNGHIRLADFG----------- 220
Query: 275 QMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAK----SDVFSFGIVVLEVVS 330
S + + +++ GT Y+ PE Q K D +S G+ + E++
Sbjct: 221 ----SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLY 276
Query: 331 G 331
G
Sbjct: 277 G 277
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 100/231 (43%), Gaps = 47/231 (20%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK----GERFEKTFA----AELVAVAHLRHR 168
+ LGSG G+V A VA++ ++++ G E A E+ + L H
Sbjct: 155 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHP 214
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
+++++ + ED +++ D+V+ + EA L + Q + A+
Sbjct: 215 CIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLK-EATCKLYFYQ-------MLLAV 266
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYN---ARLGDFGLARWL-EHELQYQMRTSSARNH 284
YLHE IIHRD+K NV+L SQ ++ DFG ++ L E L MRT
Sbjct: 267 QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---MRT------ 314
Query: 285 QFHLAETTRIGGTIGYLPPESFQKGSVATA----KSDVFSFGIVVLEVVSG 331
+ GT YL PE SV TA D +S G+++ +SG
Sbjct: 315 ---------LCGTPTYLAPEVLV--SVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 100/231 (43%), Gaps = 47/231 (20%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK----GERFEKTFA----AELVAVAHLRHR 168
+ LGSG G+V A VA++ ++++ G E A E+ + L H
Sbjct: 141 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHP 200
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
+++++ + ED +++ D+V+ + EA L + Q + A+
Sbjct: 201 CIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLK-EATCKLYFYQ-------MLLAV 252
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYN---ARLGDFGLARWL-EHELQYQMRTSSARNH 284
YLHE IIHRD+K NV+L SQ ++ DFG ++ L E L MRT
Sbjct: 253 QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---MRT------ 300
Query: 285 QFHLAETTRIGGTIGYLPPESFQKGSVATA----KSDVFSFGIVVLEVVSG 331
+ GT YL PE SV TA D +S G+++ +SG
Sbjct: 301 ---------LCGTPTYLAPEVLV--SVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 97/241 (40%), Gaps = 45/241 (18%)
Query: 105 ELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAH 164
E+ + F+ +V+G G FG+V + + + A+K L ++E AE A
Sbjct: 84 EMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKIL----NKWEMLKRAE---TAC 136
Query: 165 LRHRNLVRLRGWC-----VH-----EDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNW 214
R V + G C +H E+ L LV DY L +L + + L
Sbjct: 137 FREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPE------ 190
Query: 215 EQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQY 274
+ + I + A+ +H+ +HRD+K NV+LD + RL DFG
Sbjct: 191 DMARFYIGEMVLAIDSIHQ---LHYVHRDIKPDNVLLDVNGHIRLADFG----------- 236
Query: 275 QMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAK----SDVFSFGIVVLEVVS 330
S + + +++ GT Y+ PE Q K D +S G+ + E++
Sbjct: 237 ----SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLY 292
Query: 331 G 331
G
Sbjct: 293 G 293
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 96/223 (43%), Gaps = 31/223 (13%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELV----AVAH-LRHRNLV 171
EV+G G F V R + G AVK + + E + ++ H L+H ++V
Sbjct: 30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
L + L +V+++M L + +R +A + +R + AL Y
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADLCFEIVKR---ADAGFVYSEAVASHYMRQILEALRYC 146
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNA---RLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
H+ IIHRDVK V+L S+ N+ +LG FG+A Q+ S L
Sbjct: 147 HDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA--------IQLGESG-------L 188
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
R+ GT ++ PE ++ DV+ G+++ ++SG
Sbjct: 189 VAGGRV-GTPHFMAPEVVKREPYGKP-VDVWGCGVILFILLSG 229
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 84/203 (41%), Gaps = 21/203 (10%)
Query: 541 LVKRLGMSKCPALRTR-FSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY-SATRILS 598
+V + P L T E L+H ++V+L + G + +++++ +
Sbjct: 56 IVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCF 115
Query: 599 HLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNP 658
++ + +S H ++ + A+ Y H + +IHR++ + L N
Sbjct: 116 EIVKRADAGFVYSEAVASH---YMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENS 169
Query: 659 ---RLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVV 715
+LG F +A L G +G R G +M+PE ++ DV+ GV+
Sbjct: 170 APVKLGGFGVAIQL-----GESGLVAGGRV--GTPHFMAPEVVKREPYGKPVDVWGCGVI 222
Query: 716 VLEVVTGQM---AVDFRLPEGLL 735
+ +++G + RL EG++
Sbjct: 223 LFILLSGCLPFYGTKERLFEGII 245
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 96/232 (41%), Gaps = 37/232 (15%)
Query: 108 IGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF---EKTFAAELVAVAH 164
+ N F + VLG GGFG+V + + G + A K L +K + E E +
Sbjct: 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK 240
Query: 165 LRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRG- 223
+ R +V L +D L LV M L ++ + A P E R
Sbjct: 241 VNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQ---AGFP---EARAVFYAAE 294
Query: 224 LAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARN 283
+ L LH + +I++RD+K N++LD + R+ D GLA
Sbjct: 295 ICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLA------------------ 333
Query: 284 HQFHLAETTRIG---GTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
H+ E I GT+GY+ PE K T D ++ G ++ E+++G+
Sbjct: 334 --VHVPEGQTIKGRVGTVGYMAPEVV-KNERYTFSPDWWALGCLLYEMIAGQ 382
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
E++++R++ I LD + R+ LA H T R G GYM+PE
Sbjct: 305 ERIVYRDLKPENILLDDHGHIRISDLGLAV------HVPEGQTIKGRV--GTVGYMAPEV 356
Query: 698 IESGEATSMADVYSFGVVVLEVVTGQ 723
+++ T D ++ G ++ E++ GQ
Sbjct: 357 VKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 96/232 (41%), Gaps = 37/232 (15%)
Query: 108 IGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERF---EKTFAAELVAVAH 164
+ N F + VLG GGFG+V + + G + A K L +K + E E +
Sbjct: 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK 240
Query: 165 LRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRG- 223
+ R +V L +D L LV M L ++ + A P E R
Sbjct: 241 VNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQ---AGFP---EARAVFYAAE 294
Query: 224 LAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARN 283
+ L LH + +I++RD+K N++LD + R+ D GLA
Sbjct: 295 ICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLA------------------ 333
Query: 284 HQFHLAETTRIG---GTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
H+ E I GT+GY+ PE K T D ++ G ++ E+++G+
Sbjct: 334 --VHVPEGQTIKGRVGTVGYMAPEVV-KNERYTFSPDWWALGCLLYEMIAGQ 382
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 638 EQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEY 697
E++++R++ I LD + R+ LA H T R G GYM+PE
Sbjct: 305 ERIVYRDLKPENILLDDHGHIRISDLGLAV------HVPEGQTIKGRV--GTVGYMAPEV 356
Query: 698 IESGEATSMADVYSFGVVVLEVVTGQ 723
+++ T D ++ G ++ E++ GQ
Sbjct: 357 VKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 97/233 (41%), Gaps = 34/233 (14%)
Query: 106 LYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLA--EKGERFEKTFAAELVAVA 163
L + + +D +V+G G FG+V + V A+K L+ E +R + F E +
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIM 129
Query: 164 HLRHRNLVRLRGWCVHEDQ--LLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKII 221
+ V ++ +C +D L +V +YMP L ++ N + P W K
Sbjct: 130 AFANSPWV-VQLFCAFQDDKYLYMVMEYMPGGDLVNLM----SNYDV--PEKWA--KFYT 180
Query: 222 RGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSA 281
+ AL +H +IHRDVK N++LD + +L DFG ++ T+
Sbjct: 181 AEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV- 236
Query: 282 RNHQFHLAETTRIGGTIGYLPPESF--QKGSVATAKS-DVFSFGIVVLEVVSG 331
GT Y+ PE Q G + D +S G+ + E++ G
Sbjct: 237 --------------GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 96/223 (43%), Gaps = 31/223 (13%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELV----AVAH-LRHRNLV 171
EV+G G F V R + G AVK + + E + ++ H L+H ++V
Sbjct: 32 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 91
Query: 172 RLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
L + L +V+++M L + +R +A + +R + AL Y
Sbjct: 92 ELLETYSSDGMLYMVFEFMDGADLCFEIVKR---ADAGFVYSEAVASHYMRQILEALRYC 148
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYNA---RLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
H+ IIHRDVK V+L S+ N+ +LG FG+A Q+ S L
Sbjct: 149 HDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA--------IQLGESG-------L 190
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
R+ GT ++ PE ++ DV+ G+++ ++SG
Sbjct: 191 VAGGRV-GTPHFMAPEVVKREPYGKP-VDVWGCGVILFILLSG 231
Score = 33.1 bits (74), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 82/197 (41%), Gaps = 21/197 (10%)
Query: 547 MSKCPALRTR-FSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY-SATRILSHLLFHN 604
+ P L T E L+H ++V+L + G + +++++ + ++
Sbjct: 64 FTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRA 123
Query: 605 NHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNP---RLG 661
+ +S H ++ + A+ Y H + +IHR++ + L N +LG
Sbjct: 124 DAGFVYSEAVASH---YMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLG 177
Query: 662 SFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721
F +A L G +G R G +M+PE ++ DV+ GV++ +++
Sbjct: 178 GFGVAIQL-----GESGLVAGGRV--GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLS 230
Query: 722 GQM---AVDFRLPEGLL 735
G + RL EG++
Sbjct: 231 GCLPFYGTKERLFEGII 247
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 94/221 (42%), Gaps = 39/221 (17%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAA---ELVAVAHLRHRNLVRLRG 175
LGSG +G+V G A+K + + A E+ + L H N+++L
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 71
Query: 176 WCVHEDQLLLVYD-YMPNRSLDRVLFRRP-ENLEAAAPLNWEQRKKIIRGLAAALHYLHE 233
+ + LV + Y D ++ R+ ++AA I++ + + YLH+
Sbjct: 72 FFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV---------IMKQVLSGTTYLHK 122
Query: 234 QLETQIIHRDVKTSNVMLDSQYN---ARLGDFGLARWLEHELQYQMRTSSARNHQFHLAE 290
I+HRD+K N++L+S+ ++ DFGL+ E + + R
Sbjct: 123 H---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL------------ 167
Query: 291 TTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
GT Y+ PE +K K DV+S G+++ ++ G
Sbjct: 168 -----GTAYYIAPEVLRKK--YDEKCDVWSCGVILYILLCG 201
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 90/216 (41%), Gaps = 29/216 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG G V A G VAVK L+ + + K ELV + + H+N++ L
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 91
Query: 177 CVHEDQLLLVYD-YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQL 235
+ L D Y+ +D L + L+ E+ ++ + + +LH
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLCQV-----IHMELDHERMSYLLYQMLCGIKHLHS-- 144
Query: 236 ETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIG 295
IIHRD+K SN+++ S ++ DFGLAR ++ N TR
Sbjct: 145 -AGIIHRDLKPSNIVVKSDCTLKILDFGLAR------------TACTNFMMTPYVVTRY- 190
Query: 296 GTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
Y PE G A D++S G ++ E+V G
Sbjct: 191 ----YRAPEVIL-GMGYAANVDIWSVGCIMGELVKG 221
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 69/169 (40%), Gaps = 18/169 (10%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQW 615
R EL L + H+N++ L T Q + ++ ++ L+ N ++ H L
Sbjct: 69 RAYRELVLLKCVNHKNIISLLNVFTPQK---TLEEFQDVYLVMELMDANLCQVIHMELDH 125
Query: 616 HHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHG 675
++ + I +LH + +IHR++ S I + D ++ F LA
Sbjct: 126 ERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLA--------- 173
Query: 676 HRKATSGNRSVRGIFG--YMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
R A + + Y +PE I + D++S G ++ E+V G
Sbjct: 174 -RTACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 98/230 (42%), Gaps = 39/230 (16%)
Query: 110 SNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAA---ELVAVAHLR 166
S+ + + LGSG +G+V G A+K + + A E+ + L
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 167 HRNLVRLRGWCVHEDQLLLVYD-YMPNRSLDRVLFRRP-ENLEAAAPLNWEQRKKIIRGL 224
H N+++L + + LV + Y D ++ R+ ++AA I++ +
Sbjct: 80 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV---------IMKQV 130
Query: 225 AAALHYLHEQLETQIIHRDVKTSNVMLDSQYN---ARLGDFGLARWLEHELQYQMRTSSA 281
+ YLH+ I+HRD+K N++L+S+ ++ DFGL+ E + + R
Sbjct: 131 LSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL--- 184
Query: 282 RNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
GT Y+ PE +K K DV+S G+++ ++ G
Sbjct: 185 --------------GTAYYIAPEVLRKK--YDEKCDVWSCGVILYILLCG 218
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 106/252 (42%), Gaps = 38/252 (15%)
Query: 83 DMEGVQMSEKVGGDNPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVK 142
D EGV ++EK+ P + Y E + +G G FG+V+R G AVK
Sbjct: 36 DNEGVLLTEKL---KPVDYEYREEV---HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVK 89
Query: 143 CLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRR 202
+ R E ELVA A L +V L G + + + + SL +++ +
Sbjct: 90 KV-----RLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQM 144
Query: 203 PENLEAAAPLNWEQRKKIIRGLA-AALHYLHEQLETQIIHRDVKTSNVMLDSQYN-ARLG 260
P E R G A L YLH + +I+H DVK NV+L S + A L
Sbjct: 145 -----GCLP---EDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALC 193
Query: 261 DFGLARWLEHE-LQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVF 319
DFG A L+ + L + T I GT ++ PE G AK D++
Sbjct: 194 DFGHALCLQPDGLGKSLLTGD------------YIPGTETHMAPEVVM-GKPCDAKVDIW 240
Query: 320 SFGIVVLEVVSG 331
S ++L +++G
Sbjct: 241 SSCCMMLHMLNG 252
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 106/252 (42%), Gaps = 38/252 (15%)
Query: 83 DMEGVQMSEKVGGDNPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVK 142
D EGV ++EK+ P + Y E + +G G FG+V+R G AVK
Sbjct: 52 DNEGVLLTEKL---KPVDYEYREEV---HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVK 105
Query: 143 CLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRR 202
+ R E ELVA A L +V L G + + + + SL +++ +
Sbjct: 106 KV-----RLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQM 160
Query: 203 PENLEAAAPLNWEQRKKIIRGLA-AALHYLHEQLETQIIHRDVKTSNVMLDSQYN-ARLG 260
P E R G A L YLH + +I+H DVK NV+L S + A L
Sbjct: 161 -----GCLP---EDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALC 209
Query: 261 DFGLARWLEHE-LQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVF 319
DFG A L+ + L + T I GT ++ PE G AK D++
Sbjct: 210 DFGHALCLQPDGLGKSLLTGD------------YIPGTETHMAPEVVM-GKPCDAKVDIW 256
Query: 320 SFGIVVLEVVSG 331
S ++L +++G
Sbjct: 257 SSCCMMLHMLNG 268
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
F+ + +G+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 101
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +YMP + L R E A Q +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQ-------IVLTF 154
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK------------------- 192
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
F+ + +G+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 101
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +YMP + L R E A Q +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQ-------IVLTF 154
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK------------------- 192
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 234
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 88/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
F+ + LG+G FG+V G A+K L + K + E T + + A +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQA-VNFP 101
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y P + L R E A Q +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ-------IVLTF 154
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+M+D Q ++ DFGLA+ ++
Sbjct: 155 EYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVK------------------- 192
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 234
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
F+ + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 101
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y P + L R E A Q +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQ-------IVLTF 154
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+M+D Q ++ DFG A+ ++
Sbjct: 155 EYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK------------------- 192
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 234
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
F+ + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 102
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y P + L R E A Q +
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ-------IVLTF 155
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+M+D Q ++ DFG A+ ++
Sbjct: 156 EYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK------------------- 193
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 194 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 235
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 96/224 (42%), Gaps = 38/224 (16%)
Query: 115 EDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLR-HRNLVRL 173
+D+ LG G F + V AVK ++ +R E E+ A+ H N+V+L
Sbjct: 15 KDKPLGEGSFSICRKCVHKKSNQAFAVKIIS---KRMEANTQKEITALKLCEGHPNIVKL 71
Query: 174 RGWCVHEDQL--LLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYL 231
V DQL LV + + L + ++ E A I+R L +A+ ++
Sbjct: 72 HE--VFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASY-------IMRKLVSAVSHM 122
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYN---ARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
H + ++HRD+K N++ + + ++ DFG AR + Q ++T
Sbjct: 123 H---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ-PLKTPCF------- 171
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
T+ Y PE + + D++S G+++ ++SG+
Sbjct: 172 --------TLHYAAPELLNQNGYDES-CDLWSLGVILYTMLSGQ 206
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 100/223 (44%), Gaps = 36/223 (16%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
+V+G+G FG V++A L V K L +K RF+ EL + ++H N+V L+ +
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQDK--RFKNR---ELQIMRIVKHPNVVDLKAF 100
Query: 177 CV----HEDQLL--LVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
+D++ LV +Y+P ++ R R L+ P+ K + L +L Y
Sbjct: 101 FYSNGDKKDEVFLNLVLEYVP-ETVYRA-SRHYAKLKQTMPMLL--IKLYMYQLLRSLAY 156
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNA-RLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
+H I HRD+K N++LD +L DFG A+ L + + S + +
Sbjct: 157 IH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL---IAGEPNVSXICSRYYRAP 210
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR 332
E I G Y T D++S G V+ E++ G+
Sbjct: 211 EL--IFGATNY------------TTNIDIWSTGCVMAELMQGQ 239
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
F+ + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 94
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y+P + L R E A Q +
Sbjct: 95 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ-------IVLTF 147
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 148 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------------------- 185
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 186 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 227
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 98/256 (38%), Gaps = 57/256 (22%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLA--EKGERFEKTFAAELVAVAHLRHRNLVRLR 174
+V+G G FG+V S V A+K L+ E +R + F E + + V
Sbjct: 80 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 139
Query: 175 GWCVHEDQLL-LVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAA----ALH 229
+ +D+ L +V +YMP L ++ N++ +K R A AL
Sbjct: 140 FYAFQDDRYLYMVMEYMPGGDLVNLM------------SNYDVPEKWARFYTAEVVLALD 187
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
+H IHRDVK N++LD + +L DFG + E + T+
Sbjct: 188 AIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV--------- 235
Query: 290 ETTRIGGTIGYLPPESF--QKGSVATAKS-DVFSFGIVVLEVVSGRRAV----------- 335
GT Y+ PE Q G + D +S G+ + E++ G
Sbjct: 236 ------GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSK 289
Query: 336 ------DLTYPDDQII 345
LT+PDD I
Sbjct: 290 IMNHKNSLTFPDDNDI 305
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 88/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
F+ + LG+G FG+V G A+K L + K + E T + + A +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQA-VNFP 101
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y P + L R E A Q +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ-------IVLTF 154
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+M+D Q ++ DFGLA+ ++
Sbjct: 155 EYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVK------------------- 192
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 234
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 99/234 (42%), Gaps = 36/234 (15%)
Query: 103 YAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAEL-VA 161
Y + + S+G+ E +G G + + R V + AVK + ++ ++ + E+ +
Sbjct: 19 YFQSMVFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVI----DKSKRDPSEEIEIL 74
Query: 162 VAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKII 221
+ + +H N++ L+ + LV + M L + R+ E A ++
Sbjct: 75 LRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-------VL 127
Query: 222 RGLAAALHYLHEQLETQIIHRDVKTSNVM-LDSQYNA---RLGDFGLARWLEHELQYQMR 277
+ + YLH Q ++HRD+K SN++ +D N R+ DFG A+ L E M
Sbjct: 128 HTIGKTVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMT 184
Query: 278 TSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
N ++ PE ++ D++S GI++ +++G
Sbjct: 185 PCYTAN----------------FVAPEVLKRQGYDEG-CDIWSLGILLYTMLAG 221
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 96/233 (41%), Gaps = 31/233 (13%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLA--EKGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
LG GGF V DG A+K + E+ +R E A++ + H N++RL +
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRL--FNHPNILRLVAY 94
Query: 177 CV------HEDQLLLVYDYMPNRSLDR-VLFRRPENLEAAAP-LNWEQRKKIIRGLAAAL 228
C+ HE LLL + R L+ E L+ L +Q ++ G+ L
Sbjct: 95 CLRERGAKHEAWLLLPF-------FKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGL 147
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
+H + HRD+K +N++L + L D G Q + +R L
Sbjct: 148 EAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMN------QACIHVEGSRQ-ALTL 197
Query: 289 AETTRIGGTIGYLPPESF--QKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTY 339
+ TI Y PE F Q V ++DV+S G V+ ++ G D+ +
Sbjct: 198 QDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVF 250
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
F+ + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 101
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y P + L R E A Q +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ-------IVLTF 154
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+M+D Q ++ DFG A+ ++
Sbjct: 155 EYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK------------------- 192
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 234
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 94/213 (44%), Gaps = 30/213 (14%)
Query: 74 RKEHSGLFHDMEGVQM---------SEKVGGDNPRIFSYAELYIGSNGFDEDEVLGSGGF 124
++ +SG H + G Q S K PR S ++ + ++ ++G+G +
Sbjct: 10 QQHNSGTQHTVSGSQQEGQQRKQHHSSKPTASMPRPHSDWQI---PDRYEIRHLIGTGSY 66
Query: 125 GKVYRAVLPSDGTVVAVKCLAEKGERFE--KTFAAELVAVAHLRHRNLVRLRGWCVHED- 181
G V A + VVA+K + E K E+ + L H ++V++ + +D
Sbjct: 67 GHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDV 126
Query: 182 ----QLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLET 237
+L +V + S + LFR P L K ++ L + Y+H
Sbjct: 127 EKFDELYVVLEIA--DSDFKKLFRTPVYLTEL------HIKTLLYNLLVGVKYVHS---A 175
Query: 238 QIIHRDVKTSNVMLDSQYNARLGDFGLARWLEH 270
I+HRD+K +N +++ + ++ DFGLAR +++
Sbjct: 176 GILHRDLKPANCLVNQDCSVKVCDFGLARTVDY 208
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 98/256 (38%), Gaps = 57/256 (22%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLA--EKGERFEKTFAAELVAVAHLRHRNLVRLR 174
+V+G G FG+V S V A+K L+ E +R + F E + + V
Sbjct: 75 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 134
Query: 175 GWCVHEDQLL-LVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAA----ALH 229
+ +D+ L +V +YMP L ++ N++ +K R A AL
Sbjct: 135 FYAFQDDRYLYMVMEYMPGGDLVNLM------------SNYDVPEKWARFYTAEVVLALD 182
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
+H IHRDVK N++LD + +L DFG + E + T+
Sbjct: 183 AIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV--------- 230
Query: 290 ETTRIGGTIGYLPPESF--QKGSVATAKS-DVFSFGIVVLEVVSGRRAV----------- 335
GT Y+ PE Q G + D +S G+ + E++ G
Sbjct: 231 ------GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSK 284
Query: 336 ------DLTYPDDQII 345
LT+PDD I
Sbjct: 285 IMNHKNSLTFPDDNDI 300
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 65/127 (51%), Gaps = 22/127 (17%)
Query: 212 LNWEQRKKII----RGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQ--YNARLGDFGLA 265
L++ QR+K+I R + +ALHYLH Q I HRD+K N + + + +L DFGL+
Sbjct: 161 LDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLS 217
Query: 266 RWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATA-KSDVFSFGIV 324
+ Y++ N+ + TT+ GT ++ PE + + K D +S G++
Sbjct: 218 KEF-----YKL------NNGEYYGMTTK-AGTPYFVAPEVLNTTNESYGPKCDAWSAGVL 265
Query: 325 VLEVVSG 331
+ ++ G
Sbjct: 266 LHLLLMG 272
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 98/256 (38%), Gaps = 57/256 (22%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLA--EKGERFEKTFAAELVAVAHLRHRNLVRLR 174
+V+G G FG+V S V A+K L+ E +R + F E + + V
Sbjct: 80 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 139
Query: 175 GWCVHEDQLL-LVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAA----ALH 229
+ +D+ L +V +YMP L ++ N++ +K R A AL
Sbjct: 140 FYAFQDDRYLYMVMEYMPGGDLVNLM------------SNYDVPEKWARFYTAEVVLALD 187
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
+H IHRDVK N++LD + +L DFG + E + T+
Sbjct: 188 AIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV--------- 235
Query: 290 ETTRIGGTIGYLPPESF--QKGSVATAKS-DVFSFGIVVLEVVSGRRAV----------- 335
GT Y+ PE Q G + D +S G+ + E++ G
Sbjct: 236 ------GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSK 289
Query: 336 ------DLTYPDDQII 345
LT+PDD I
Sbjct: 290 IMNHKNSLTFPDDNDI 305
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
F+ + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 94
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y+P + L R E A Q +
Sbjct: 95 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ-------IVLTF 147
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 148 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------------------- 185
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 186 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 227
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
F+ + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 101
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y+P + L R E A Q +
Sbjct: 102 FLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ-------IVLTF 154
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------------------- 192
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
F+ + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 101
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y+P + L R E A Q +
Sbjct: 102 FLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ-------IVLTF 154
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------------------- 192
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 234
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
F+ + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 102
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y+P + L R E A Q +
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ-------IVLTF 155
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 156 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------------------- 193
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 194 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 235
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
F+ + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 101
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y+P + L R E A Q +
Sbjct: 102 FLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ-------IVLTF 154
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------------------- 192
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 234
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
F+ + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 101
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y P + L R E A Q +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ-------IVLTF 154
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+M+D Q ++ DFG A+ ++
Sbjct: 155 EYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVK------------------- 192
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 234
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 87/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
F+ LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 44 FERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQA-VNFP 102
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y P + L R E A Q +
Sbjct: 103 FLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQ-------IVLTF 155
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 156 EYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK------------------- 193
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 194 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 235
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 20/127 (15%)
Query: 238 QIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGT 297
+ IHRD+ N++L + ++ DFGLAR + + Y +R AR
Sbjct: 211 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-VRKGDARL-------------P 256
Query: 298 IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIRRLSDEG 357
+ ++ PE+ V T +SDV+SFG+++ E+ S + YP +I ++ RRL EG
Sbjct: 257 LKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGAS---PYPGVKID-EEFCRRLK-EG 310
Query: 358 KVLQAGD 364
++A D
Sbjct: 311 TRMRAPD 317
Score = 36.2 bits (82), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 637 NEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPE 696
+ + IHR++ + I L ++ F LA + ++ RK + R +M+PE
Sbjct: 209 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA-----RLPLKWMAPE 263
Query: 697 YIESGEATSMADVYSFGVVVLEVVT 721
I T +DV+SFGV++ E+ +
Sbjct: 264 TIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 15/93 (16%)
Query: 238 QIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGT 297
+ IHRD+ N++L + ++ DFGLAR + + Y +R AR
Sbjct: 218 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-VRKGDARL-------------P 263
Query: 298 IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ ++ PE+ V T +SDV+SFG+++ E+ S
Sbjct: 264 LKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFS 295
Score = 36.2 bits (82), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 637 NEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPE 696
+ + IHR++ + I L ++ F LA + ++ RK + R +M+PE
Sbjct: 216 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA-----RLPLKWMAPE 270
Query: 697 YIESGEATSMADVYSFGVVVLEVVT 721
I T +DV+SFGV++ E+ +
Sbjct: 271 TIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
F+ + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 101
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y+P + L R E A Q +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ-------IVLTF 154
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------------------- 192
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 234
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 93/224 (41%), Gaps = 34/224 (15%)
Query: 117 EVLGSGGFGKVYRAVLPSD-----GTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLV 171
++LG G +GKV + VL S+ + K + E E+ + LRH+N++
Sbjct: 11 DLLGEGSYGKV-KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVI 69
Query: 172 RLRGWCVHEDQ--LLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALH 229
+L +E++ + +V +Y + +L PE Q L L
Sbjct: 70 QLVDVLYNEEKQKMYMVMEYC-VCGMQEMLDSVPEKRFPVC-----QAHGYFCQLIDGLE 123
Query: 230 YLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
YLH Q I+H+D+K N++L + ++ G+A L H F
Sbjct: 124 YLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEAL---------------HPFAAD 165
Query: 290 ETTRIG-GTIGYLPPESFQK-GSVATAKSDVFSFGIVVLEVVSG 331
+T R G+ + PPE + + K D++S G+ + + +G
Sbjct: 166 DTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG 209
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 74/177 (41%), Gaps = 19/177 (10%)
Query: 551 PALRTRFSNELQNLARLRHRNLVQLCG--WCTEQGEMLVIYDYSATRILSHLLFHNNHRI 608
P E+Q L RLRH+N++QL + E+ +M ++ +Y + L R
Sbjct: 47 PNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRF 106
Query: 609 GHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEF 668
+ Q H + L + YLH ++ ++H++I + L ++ + +AE
Sbjct: 107 --PVCQAHGYFC---QLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEA 158
Query: 669 LTRNDHGHRKATSGN-RSVRGIFGYMSPEYIESGEATS--MADVYSFGVVVLEVVTG 722
L H A R+ +G + PE + S D++S GV + + TG
Sbjct: 159 L------HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
F+ + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 102
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y+P + L R E A Q +
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ-------IVLTF 155
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 156 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------------------- 193
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 194 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 235
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 17/94 (18%)
Query: 238 QIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGT 297
+ IHRD+ N++L + ++ DFGLAR + + Y +R AR
Sbjct: 220 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-VRKGDARL-------------P 265
Query: 298 IGYLPPES-FQKGSVATAKSDVFSFGIVVLEVVS 330
+ ++ PE+ F + V T +SDV+SFG+++ E+ S
Sbjct: 266 LKWMAPETIFDR--VYTIQSDVWSFGVLLWEIFS 297
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 637 NEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPE 696
+ + IHR++ + I L ++ F LA + ++ RK + R +M+PE
Sbjct: 218 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA-----RLPLKWMAPE 272
Query: 697 YIESGEATSMADVYSFGVVVLEVVT 721
I T +DV+SFGV++ E+ +
Sbjct: 273 TIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
F+ + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 102
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y+P + L R E A Q +
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ-------IVLTF 155
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 156 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------------------- 193
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 194 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 235
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
F+ + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 64 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 122
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y+P + L R E A Q +
Sbjct: 123 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ-------IVLTF 175
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 176 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------------------- 213
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 214 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 255
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 20/127 (15%)
Query: 238 QIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGT 297
+ IHRD+ N++L + ++ DFGLAR + + Y +R AR
Sbjct: 213 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-VRKGDARL-------------P 258
Query: 298 IGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIRRLSDEG 357
+ ++ PE+ V T +SDV+SFG+++ E+ S + YP +I ++ RRL EG
Sbjct: 259 LKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGAS---PYPGVKID-EEFCRRLK-EG 312
Query: 358 KVLQAGD 364
++A D
Sbjct: 313 TRMRAPD 319
Score = 36.2 bits (82), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 637 NEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPE 696
+ + IHR++ + I L ++ F LA + ++ RK + R +M+PE
Sbjct: 211 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA-----RLPLKWMAPE 265
Query: 697 YIESGEATSMADVYSFGVVVLEVVT 721
I T +DV+SFGV++ E+ +
Sbjct: 266 TIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
F+ + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 102
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y+P + L R E A Q +
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ-------IVLTF 155
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 156 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------------------- 193
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 194 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 235
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
F+ + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 101
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y+P + L R E A Q +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ-------IVLTF 154
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------------------- 192
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 234
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 90/221 (40%), Gaps = 39/221 (17%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAE-----KGERFEKTFAAELVAVAHLRHRNLVRL 173
+G G F VY+ L ++ TV C + K ER + F E + L+H N+VR
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSER--QRFKEEAEXLKGLQHPNIVRF 90
Query: 174 -RGW--CVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230
W V + +++ + + +R + + +W R + L +
Sbjct: 91 YDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSW------CRQILKGLQF 144
Query: 231 LHEQLETQIIHRDVKTSNVMLDSQYNA-RLGDFGLARWLEHELQYQMRTSSARNHQFHLA 289
LH + IIHRD+K N+ + + ++GD GLA R S A+
Sbjct: 145 LHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL--------KRASFAKA------ 189
Query: 290 ETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330
+ GT + PE +++ + DV++FG LE +
Sbjct: 190 ----VIGTPEFXAPEXYEEKYDESV--DVYAFGXCXLEXAT 224
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 88/210 (41%), Gaps = 34/210 (16%)
Query: 526 FGTAYQGFLDNHQYVLV-------KRLGMSKCPALRTRFSNELQNLARLRHRNLVQLC-G 577
F T Y+G LD V V ++L S+ R RF E + L L+H N+V+
Sbjct: 39 FKTVYKG-LDTETTVEVAWCELQDRKLTKSE----RQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 578 W-CTEQGE--MLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHE 634
W T +G+ ++++ + + L L + W + I+K L +LH
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQ--ILKGLQ----FLHT 147
Query: 635 EWNEQVIHRNITSSAITLD-PDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYM 693
+IHR++ I + P + ++G LA K S ++V G +
Sbjct: 148 R-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL---------KRASFAKAVIGTPEFX 197
Query: 694 SPEYIESGEATSMADVYSFGVVVLEVVTGQ 723
+PE E S+ DVY+FG LE T +
Sbjct: 198 APEXYEEKYDESV-DVYAFGXCXLEXATSE 226
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 11/151 (7%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHLRHRNLVRLRGW 176
+GSG G V A G VAVK L+ + + K ELV + + H+N++ L
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 89
Query: 177 CVHEDQLLLVYD-YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQL 235
+ L D Y+ +D L + L+ E+ ++ + + +LH
Sbjct: 90 FTPQKTLEEFQDVYLVMELMDANLCQV-----IHMELDHERMSYLLYQMLCGIKHLHS-- 142
Query: 236 ETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266
IIHRD+K SN+++ S ++ DFGLAR
Sbjct: 143 -AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 172
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 70/171 (40%), Gaps = 18/171 (10%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQW 615
R EL L + H+N++ L T Q + ++ ++ L+ N ++ H L
Sbjct: 67 RAYRELVLLKCVNHKNIISLLNVFTPQK---TLEEFQDVYLVMELMDANLCQVIHMELDH 123
Query: 616 HHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHG 675
++ + I +LH + +IHR++ S I + D ++ F LA
Sbjct: 124 ERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLA--------- 171
Query: 676 HRKATSGNRSVRGIFG--YMSPEYIESGEATSMADVYSFGVVVLEVVTGQM 724
R A++ + Y +PE I D++S G ++ E+V G +
Sbjct: 172 -RTASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSV 221
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 87/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
F+ + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 102
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
L +L L +V +Y P + L R E A Q +
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQ-------IVLTF 155
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+M+D Q ++ DFG A+ ++
Sbjct: 156 EYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK------------------- 193
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 194 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 235
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 89/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
F+ + +G+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 101
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y+P + L R E A Q +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ-------IVLTF 154
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK------------------- 192
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 234
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 96/227 (42%), Gaps = 36/227 (15%)
Query: 110 SNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAEL-VAVAHLRHR 168
S+G+ E +G G + + R V + AVK + ++ ++ + E+ + + + +H
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVI----DKSKRDPSEEIEILLRYGQHP 81
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
N++ L+ + LV + M L + R+ E A ++ + +
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-------VLHTIGKTV 134
Query: 229 HYLHEQLETQIIHRDVKTSNVM-LDSQYNA---RLGDFGLARWLEHELQYQMRTSSARNH 284
YLH Q ++HRD+K SN++ +D N R+ DFG A+ L E M N
Sbjct: 135 EYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTAN- 190
Query: 285 QFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
++ PE ++ D++S GI++ +++G
Sbjct: 191 ---------------FVAPEVLKRQGYDEG-CDIWSLGILLYTMLAG 221
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
FD + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 101
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y+ + L R E A Q +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-------IVLTF 154
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------------------- 192
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 193 GRTWXLAGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 234
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
F+ + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 29 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 87
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y+P + L R E A Q +
Sbjct: 88 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ-------IVLTF 140
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 141 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------------------- 178
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 179 GRTWTLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 220
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 17/154 (11%)
Query: 119 LGSGGFGKV---YRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHLRHRNLVRL 173
+GSG G V Y AVL + VA+K L+ + + K ELV + + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISL 88
Query: 174 RGWCVHEDQLLLVYD-YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
+ L D Y+ +D L + + L+ E+ ++ + + +LH
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ-----MELDHERMSYLLYQMLCGIKHLH 143
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266
IIHRD+K SN+++ S ++ DFGLAR
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
F+ + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 102
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y+P + L R E A Q +
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ-------IVLTF 155
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 156 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------------------- 193
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 194 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 235
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 88/220 (40%), Gaps = 23/220 (10%)
Query: 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRG-WC 177
+G G +G VY+A +G + E+ + L+H N++ L+ +
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFL 88
Query: 178 VHED-QLLLVYDYMPNRSLDRVLFRRPENL-EAAAPLNWEQRKKIIRGLAAALHYLHEQL 235
H D ++ L++DY + + F R + L K ++ + +HYLH
Sbjct: 89 SHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW 148
Query: 236 ETQIIHRDVKTSNVMLDSQYNAR----LGDFGLARWLEHELQYQMRTSSARNHQFHLAET 291
++HRD+K +N+++ + R + D G AR L+ LA+
Sbjct: 149 ---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLK-------------PLADL 192
Query: 292 TRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
+ T Y PE T D+++ G + E+++
Sbjct: 193 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 232
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
FD + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 38 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 96
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y+ + L R E A Q +
Sbjct: 97 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ-------IVLTF 149
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 150 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------------------- 187
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 188 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 229
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
F+ + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 101
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y+P + L R E A Q +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ-------IVLTF 154
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------------------- 192
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
F+ + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 101
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y+P + L R E A Q +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ-------IVLTF 154
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------------------- 192
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 234
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 17/154 (11%)
Query: 119 LGSGGFGKV---YRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHLRHRNLVRL 173
+GSG G V Y AVL + VA+K L+ + + K ELV + + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISL 88
Query: 174 RGWCVHEDQLLLVYD-YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
+ L D Y+ +D L + + L+ E+ ++ + + +LH
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH 143
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266
IIHRD+K SN+++ S ++ DFGLAR
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 92/223 (41%), Gaps = 33/223 (14%)
Query: 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLA--EKGERFEKT-FAAELVAVAHLRHRNLVRL 173
+V+G G FG+V L + V A+K L E +R E F E + + + + L
Sbjct: 80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTL 139
Query: 174 RGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHE 233
++ L LV DY L +L + + L E + + + A+ +H+
Sbjct: 140 HYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPE------EMARFYLAEMVIAIDSVHQ 193
Query: 234 QLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTR 293
+HRD+K N+++D + RL DFG S + + +++
Sbjct: 194 ---LHYVHRDIKPDNILMDMNGHIRLADFG---------------SCLKLMEDGTVQSSV 235
Query: 294 IGGTIGYLPPESFQ-----KGSVATAKSDVFSFGIVVLEVVSG 331
GT Y+ PE Q KG + D +S G+ + E++ G
Sbjct: 236 AVGTPDYISPEILQAMEGGKGRYG-PECDWWSLGVCMYEMLYG 277
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
F+ + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 101
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y+P + L R E A Q +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ-------IVLTF 154
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------------------- 192
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 234
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
F+ + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 102
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y+P + L R E A Q +
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ-------IVLTF 155
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 156 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------------------- 193
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 194 GRTWTLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 235
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 17/154 (11%)
Query: 119 LGSGGFGKV---YRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHLRHRNLVRL 173
+GSG G V Y AVL + VA+K L+ + + K ELV + + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISL 88
Query: 174 RGWCVHEDQLLLVYD-YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
+ L D Y+ +D L + L+ E+ ++ + + +LH
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDANLXQV-----IQMELDHERMSYLLYQMLXGIKHLH 143
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266
IIHRD+K SN+++ S ++ DFGLAR
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 87/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
F+ + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 102
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
L +L L +V +Y P + L R E A Q +
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ-------IVLTF 155
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+M+D Q ++ DFG A+ ++
Sbjct: 156 EYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK------------------- 193
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 194 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 235
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 87/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
F+ + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 102
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
L +L L +V +Y P + L R E A Q +
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ-------IVLTF 155
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+M+D Q ++ DFG A+ ++
Sbjct: 156 EYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK------------------- 193
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 194 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 235
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 88/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
FD + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 122
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y+ + L R E A Q +
Sbjct: 123 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-------IVLTF 175
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ R A
Sbjct: 176 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------RVKGA------- 215
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 216 --TWTLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 255
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
FD + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 101
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y+ + L R E A Q +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ-------IVLTF 154
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------------------- 192
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 234
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 17/94 (18%)
Query: 238 QIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGT 297
+ IHRD+ N++L ++ DFGLAR + +N + TR+
Sbjct: 219 KCIHRDLAARNILLSENNVVKICDFGLARDI------------YKNPDYVRKGDTRL--P 264
Query: 298 IGYLPPES-FQKGSVATAKSDVFSFGIVVLEVVS 330
+ ++ PES F K + + KSDV+S+G+++ E+ S
Sbjct: 265 LKWMAPESIFDK--IYSTKSDVWSYGVLLWEIFS 296
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 15/109 (13%)
Query: 639 QVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYI 698
+ IHR++ + I L + ++ F LA + +N RK + R +M+PE I
Sbjct: 219 KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDT-----RLPLKWMAPESI 273
Query: 699 ESGEATSMADVYSFGVVVLEVVT--------GQMAVDF--RLPEGLLVK 737
++ +DV+S+GV++ E+ + QM DF RL EG+ ++
Sbjct: 274 FDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMRMR 322
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
FD + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 101
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y+ + L R E A Q +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ-------IVLTF 154
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------------------- 192
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
FD + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 101
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y+ + L R E A Q +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ-------IVLTF 154
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------------------- 192
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 234
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
FD + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 122
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y+ + L R E A Q +
Sbjct: 123 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ-------IVLTF 175
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 176 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------------------- 213
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 214 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 255
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 100/227 (44%), Gaps = 31/227 (13%)
Query: 115 EDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLR-HRNLVRL 173
+++VLG G +V + AVK + ++ E+ + + HRN++ L
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 174 RGWCVHEDQLLLVYDYMPNRS-LDRVLFRRPEN-LEAAAPLNWEQRKKIIRGLAAALHYL 231
+ ED+ LV++ M S L + RR N LEA+ +++ +A+AL +L
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV---------VVQDVASALDFL 127
Query: 232 HEQLETQIIHRDVKTSNVMLDSQYN---ARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
H + I HRD+K N++ + ++ DFGL ++ +
Sbjct: 128 HNK---GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIK---------LNGDCSPIST 175
Query: 289 AETTRIGGTIGYLPPESF----QKGSVATAKSDVFSFGIVVLEVVSG 331
E G+ Y+ PE ++ S+ + D++S G+++ ++SG
Sbjct: 176 PELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
FD + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 101
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y+ + L R E A Q +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-------IVLTF 154
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------------------- 192
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 193 GRTWXLXGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
FD + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 101
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y+ + L R E A Q +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQ-------IVLTF 154
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------------------- 192
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 234
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 17/154 (11%)
Query: 119 LGSGGFGKV---YRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHLRHRNLVRL 173
+GSG G V Y AVL + VA+K L+ + + K ELV + + H+N++ L
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 126
Query: 174 RGWCVHEDQLLLVYD-YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
+ L D Y+ +D L + + L+ E+ ++ + + +LH
Sbjct: 127 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH 181
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266
IIHRD+K SN+++ S ++ DFGLAR
Sbjct: 182 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
FD + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 30 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 88
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y+ + L R E A Q +
Sbjct: 89 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-------IVLTF 141
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 142 EYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVK------------------- 179
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 180 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 221
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
FD + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 44 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 102
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y+ + L R E A Q +
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-------IVLTF 155
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 156 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------------------- 193
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 194 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 235
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 17/154 (11%)
Query: 119 LGSGGFGKV---YRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHLRHRNLVRL 173
+GSG G V Y AVL + VA+K L+ + + K ELV + + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 88
Query: 174 RGWCVHEDQLLLVYD-YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
+ L D Y+ +D L + L+ E+ ++ + + +LH
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDANLXQV-----IQMELDHERMSYLLYQMLXGIKHLH 143
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266
IIHRD+K SN+++ S ++ DFGLAR
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
FD + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 101
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y+ + L R E A Q +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-------IVLTF 154
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------------------- 192
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 234
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 17/154 (11%)
Query: 119 LGSGGFGKV---YRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHLRHRNLVRL 173
+GSG G V Y AVL + VA+K L+ + + K ELV + + H+N++ L
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 126
Query: 174 RGWCVHEDQLLLVYD-YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
+ L D Y+ +D L + + L+ E+ ++ + + +LH
Sbjct: 127 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH 181
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266
IIHRD+K SN+++ S ++ DFGLAR
Sbjct: 182 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
FD + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 101
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y+ + L R E A Q +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-------IVLTF 154
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------------------- 192
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 234
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 94/241 (39%), Gaps = 38/241 (15%)
Query: 105 ELYIGSNGFDEDEVLGSGGFGKVYRAVLPS-DGTVVAVKCLAEKGERFEKT----FAAEL 159
++ I F +LG G FG V A L DG+ V V K + + F E
Sbjct: 17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREA 76
Query: 160 VAVAHLRHRNLVRLRGWCVHEDQ------LLLVYDYMPNRSLDRVLF--RRPENLEAAAP 211
+ H ++ +L G + +++ +M + L L R EN P
Sbjct: 77 ACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGEN-----P 131
Query: 212 LNWEQRK--KIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLE 269
N + + + +A + YL + IHRD+ N ML + DFGL+R +
Sbjct: 132 FNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIY 188
Query: 270 HELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVV 329
Y+ +S + +L ES ++ T SDV++FG+ + E++
Sbjct: 189 SGDYYRQGCASKL--------------PVKWLALESLAD-NLYTVHSDVWAFGVTMWEIM 233
Query: 330 S 330
+
Sbjct: 234 T 234
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 641 IHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIES 700
IHR++ + L DM + F L+ + D+ +R+ + V+ +++ E +
Sbjct: 159 IHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDY-YRQGCASKLPVK----WLALESLAD 213
Query: 701 GEATSMADVYSFGVVVLEVVT 721
T +DV++FGV + E++T
Sbjct: 214 NLYTVHSDVWAFGVTMWEIMT 234
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 17/154 (11%)
Query: 119 LGSGGFGKV---YRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHLRHRNLVRL 173
+GSG G V Y AVL + VA+K L+ + + K ELV + + H+N++ L
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 81
Query: 174 RGWCVHEDQLLLVYD-YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
+ L D Y+ +D L + L+ E+ ++ + + +LH
Sbjct: 82 LNVFTPQKTLEEFQDVYLVMELMDANLXQV-----IQMELDHERMSYLLYQMLXGIKHLH 136
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266
IIHRD+K SN+++ S ++ DFGLAR
Sbjct: 137 S---AGIIHRDLKPSNIVVKSDXTLKILDFGLAR 167
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 17/154 (11%)
Query: 119 LGSGGFGKV---YRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHLRHRNLVRL 173
+GSG G V Y AVL + VA+K L+ + + K ELV + + H+N++ L
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 89
Query: 174 RGWCVHEDQLLLVYD-YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
+ L D Y+ +D L + L+ E+ ++ + + +LH
Sbjct: 90 LNVFTPQKTLEEFQDVYLVMELMDANLCQV-----IQMELDHERMSYLLYQMLCGIKHLH 144
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266
IIHRD+K SN+++ S ++ DFGLAR
Sbjct: 145 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
FD + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 101
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y+ + L R E A Q +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-------IVLTF 154
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------------------- 192
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
FD + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 101
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y+ + L R E A Q +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-------IVLTF 154
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------------------- 192
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 234
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 17/154 (11%)
Query: 119 LGSGGFGKV---YRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHLRHRNLVRL 173
+GSG G V Y AVL + VA+K L+ + + K ELV + + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 88
Query: 174 RGWCVHEDQLLLVYD-YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
+ L D Y+ +D L + L+ E+ ++ + + +LH
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDANLCQV-----IQMELDHERMSYLLYQMLCGIKHLH 143
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266
IIHRD+K SN+++ S ++ DFGLAR
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
FD + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 101
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y+ + L R E A Q +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-------IVLTF 154
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------------------- 192
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYEMAAG 234
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 17/154 (11%)
Query: 119 LGSGGFGKV---YRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHLRHRNLVRL 173
+GSG G V Y AVL + VA+K L+ + + K ELV + + H+N++ L
Sbjct: 31 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 87
Query: 174 RGWCVHEDQLLLVYD-YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
+ L D Y+ +D L + L+ E+ ++ + + +LH
Sbjct: 88 LNVFTPQKTLEEFQDVYLVMELMDANLCQV-----IQMELDHERMSYLLYQMLCGIKHLH 142
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266
IIHRD+K SN+++ S ++ DFGLAR
Sbjct: 143 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 173
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 17/154 (11%)
Query: 119 LGSGGFGKV---YRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHLRHRNLVRL 173
+GSG G V Y AVL + VA+K L+ + + K ELV + + H+N++ L
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 89
Query: 174 RGWCVHEDQLLLVYD-YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
+ L D Y+ +D L + + L+ E+ ++ + + +LH
Sbjct: 90 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH 144
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266
IIHRD+K SN+++ S ++ DFGLAR
Sbjct: 145 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 96/229 (41%), Gaps = 38/229 (16%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEK------TFAAELVAVAHLR 166
+D E LGSG F V + S G A K + ++ + + E+ + ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 167 HRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAA 226
H N++ L ++ ++L+ + + L L + L E+ + ++ +
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-------ESLTEEEATEFLKQILN 125
Query: 227 ALHYLHEQLETQIIHRDVKTSNVML----DSQYNARLGDFGLARWLEHELQYQMRTSSAR 282
++YLH QI H D+K N+ML + ++ DFGLA H++ +
Sbjct: 126 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA----HKIDFG------- 171
Query: 283 NHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
E I GT ++ PE + ++D++S G++ ++SG
Sbjct: 172 ------NEFKNIFGTPAFVAPEIVNYEPLGL-EADMWSIGVITYILLSG 213
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 17/154 (11%)
Query: 119 LGSGGFGKV---YRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHLRHRNLVRL 173
+GSG G V Y AVL + VA+K L+ + + K ELV + + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 88
Query: 174 RGWCVHEDQLLLVYD-YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
+ L D Y+ +D L + + L+ E+ ++ + + +LH
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH 143
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266
IIHRD+K SN+++ S ++ DFGLAR
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
FD + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 101
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y+ + L R E A Q +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-------IVLTF 154
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 155 EYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVK------------------- 192
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ E+ +G
Sbjct: 193 GRTWXLCGTPEYLAPEIIISKGYNKA-VDWWALGVLIYEMAAG 234
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 17/154 (11%)
Query: 119 LGSGGFGKV---YRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHLRHRNLVRL 173
+GSG G V Y AVL + VA+K L+ + + K ELV + + H+N++ L
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 82
Query: 174 RGWCVHEDQLLLVYD-YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
+ L D Y+ +D L + L+ E+ ++ + + +LH
Sbjct: 83 LNVFTPQKTLEEFQDVYLVMELMDANLCQV-----IQMELDHERMSYLLYQMLCGIKHLH 137
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266
IIHRD+K SN+++ S ++ DFGLAR
Sbjct: 138 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 17/154 (11%)
Query: 119 LGSGGFGKV---YRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHLRHRNLVRL 173
+GSG G V Y AVL + VA+K L+ + + K ELV + + H+N++ L
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 81
Query: 174 RGWCVHEDQLLLVYD-YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
+ L D Y+ +D L + L+ E+ ++ + + +LH
Sbjct: 82 LNVFTPQKTLEEFQDVYLVMELMDANLCQV-----IQMELDHERMSYLLYQMLCGIKHLH 136
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266
IIHRD+K SN+++ S ++ DFGLAR
Sbjct: 137 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 167
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 17/154 (11%)
Query: 119 LGSGGFGKV---YRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHLRHRNLVRL 173
+GSG G V Y AVL + VA+K L+ + + K ELV + + H+N++ L
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 82
Query: 174 RGWCVHEDQLLLVYD-YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
+ L D Y+ +D L + L+ E+ ++ + + +LH
Sbjct: 83 LNVFTPQKTLEEFQDVYLVMELMDANLCQV-----IQMELDHERMSYLLYQMLCGIKHLH 137
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266
IIHRD+K SN+++ S ++ DFGLAR
Sbjct: 138 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 103/228 (45%), Gaps = 38/228 (16%)
Query: 110 SNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRN 169
++G++ E +G G + R + + AVK + +K +R + T E++ + + +H N
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKII-DKSKR-DPTEEIEIL-LRYGQHPN 77
Query: 170 LVRLRGWCVHEDQLLLVYDYMPNRSL-DRVLFRRP-ENLEAAAPLNWEQRKKIIRGLAAA 227
++ L+ + +V + M L D++L ++ EA+A ++ +
Sbjct: 78 IITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASA---------VLFTITKT 128
Query: 228 LHYLHEQLETQIIHRDVKTSNVM-LDSQYNA---RLGDFGLARWLEHELQYQMRTSSARN 283
+ YLH Q ++HRD+K SN++ +D N R+ DFG A+ L E M N
Sbjct: 129 VEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTAN 185
Query: 284 HQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
++ PE ++ A D++S G+++ +++G
Sbjct: 186 ----------------FVAPEVLERQGY-DAACDIWSLGVLLYTMLTG 216
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 14/106 (13%)
Query: 621 IIKSLASAILYLHEEWNEQVIHRNITSSAIT-LDPDMNP---RLGSFALAEFLTRNDHGH 676
++ ++ + YLH + V+HR++ S I +D NP R+ F A+ L R ++G
Sbjct: 121 VLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-RAENGL 176
Query: 677 RKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
+ +++PE +E + D++S GV++ ++TG
Sbjct: 177 LMTPCYTAN------FVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 31/161 (19%)
Query: 119 LGSGGFGKV---YRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHLRHRNLVRL 173
+GSG G V Y A+L + VA+K L+ + + K ELV + + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 174 RGWCVHEDQLLLVYDYMPNRSLDR------VLFRRPENLEAA--APLNWEQRKKIIRGLA 225
+ P +SL+ V+ NL L+ E+ ++ +
Sbjct: 89 LNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQML 136
Query: 226 AALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266
+ +LH IIHRD+K SN+++ S ++ DFGLAR
Sbjct: 137 CGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 68/171 (39%), Gaps = 22/171 (12%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQW 615
R EL + + H+N++ L T Q + ++ I+ L+ N ++ L
Sbjct: 69 RAYRELVLMKCVNHKNIIGLLNVFTPQKSL---EEFQDVYIVMELMDANLSQVIQMELDH 125
Query: 616 HHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHG 675
++ + I +LH + +IHR++ S I + D ++ F LA
Sbjct: 126 ERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR-------- 174
Query: 676 HRKATSGNRSVRGIFG----YMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
T+G + + Y +PE I D++S G ++ E++ G
Sbjct: 175 ----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 31/161 (19%)
Query: 119 LGSGGFGKV---YRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHLRHRNLVRL 173
+GSG G V Y A+L + VA+K L+ + + K ELV + + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 174 RGWCVHEDQLLLVYDYMPNRSLDR------VLFRRPENLEAA--APLNWEQRKKIIRGLA 225
+ P +SL+ V+ NL L+ E+ ++ +
Sbjct: 89 LNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQML 136
Query: 226 AALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266
+ +LH IIHRD+K SN+++ S ++ DFGLAR
Sbjct: 137 CGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 68/171 (39%), Gaps = 22/171 (12%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQW 615
R EL + + H+N++ L T Q + ++ I+ L+ N ++ L
Sbjct: 69 RAYRELVLMKCVNHKNIIGLLNVFTPQKSL---EEFQDVYIVMELMDANLSQVIQMELDH 125
Query: 616 HHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHG 675
++ + I +LH + +IHR++ S I + D ++ F LA
Sbjct: 126 ERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------- 174
Query: 676 HRKATSGNRSVRGIFG----YMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
T+G + + Y +PE I D++S G ++ E++ G
Sbjct: 175 ----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 31/161 (19%)
Query: 119 LGSGGFGKV---YRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHLRHRNLVRL 173
+GSG G V Y A+L + VA+K L+ + + K ELV + + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGL 88
Query: 174 RGWCVHEDQLLLVYDYMPNRSLDR------VLFRRPENLEAA--APLNWEQRKKIIRGLA 225
+ P +SL+ V+ NL L+ E+ ++ +
Sbjct: 89 LNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQML 136
Query: 226 AALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266
+ +LH IIHRD+K SN+++ S ++ DFGLAR
Sbjct: 137 VGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 68/171 (39%), Gaps = 22/171 (12%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQW 615
R EL + + H+N++ L T Q + ++ I+ L+ N ++ L
Sbjct: 69 RAYRELVLMKVVNHKNIIGLLNVFTPQKSL---EEFQDVYIVMELMDANLSQVIQMELDH 125
Query: 616 HHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHG 675
++ + I +LH + +IHR++ S I + D ++ F LA
Sbjct: 126 ERMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR-------- 174
Query: 676 HRKATSGNRSVRGIFG----YMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
T+G + + Y +PE I D++S G ++ E++ G
Sbjct: 175 ----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 31/161 (19%)
Query: 119 LGSGGFGKV---YRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHLRHRNLVRL 173
+GSG G V Y A+L + VA+K L+ + + K ELV + + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGL 88
Query: 174 RGWCVHEDQLLLVYDYMPNRSLDR------VLFRRPENLEAA--APLNWEQRKKIIRGLA 225
+ P +SL+ V+ NL L+ E+ ++ +
Sbjct: 89 LNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQML 136
Query: 226 AALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266
+ +LH IIHRD+K SN+++ S ++ DFGLAR
Sbjct: 137 VGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 69/171 (40%), Gaps = 22/171 (12%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQW 615
R EL + + H+N++ L T Q + ++ I+ L+ N ++ L
Sbjct: 69 RAYRELVLMKVVNHKNIIGLLNVFTPQKSL---EEFQDVYIVMELMDANLSQVIQMELDH 125
Query: 616 HHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHG 675
++ + I +LH + +IHR++ S I + D ++ F LA
Sbjct: 126 ERMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR-------- 174
Query: 676 HRKATSGNRSVRGIFG----YMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
T+G + + Y +PE I D++S GV++ E++ G
Sbjct: 175 ----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 25/129 (19%)
Query: 206 LEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLA 265
L PL + I+R + +AL H T HRDVK N+++ + A L DFG+A
Sbjct: 125 LRRQGPLAPPRAVAIVRQIGSALDAAHAAGAT---HRDVKPENILVSADDFAYLVDFGIA 181
Query: 266 RWLEHELQYQMRTSSARNHQFHLAETTRIGGTIG---YLPPESFQKGSVATAKSDVFSFG 322
E + T++G T+G Y PE F + S AT ++D+++
Sbjct: 182 SATTDE------------------KLTQLGNTVGTLYYXAPERFSE-SHATYRADIYALT 222
Query: 323 IVVLEVVSG 331
V+ E ++G
Sbjct: 223 CVLYECLTG 231
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 68/176 (38%), Gaps = 15/176 (8%)
Query: 547 MSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNH 606
+S P RTR E + RL+ ++V + + G++ Y R+++ +
Sbjct: 71 LSSDPVFRTRXQREARTAGRLQEPHVVPIHDFGEIDGQL-----YVDXRLINGVDLAAXL 125
Query: 607 RIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALA 666
R L I++ + SA L HR++ I + D L F +A
Sbjct: 126 R-RQGPLAPPRAVAIVRQIGSA---LDAAHAAGATHRDVKPENILVSADDFAYLVDFGIA 181
Query: 667 EFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
T K T +V G Y +PE AT AD+Y+ V+ E +TG
Sbjct: 182 SATT-----DEKLTQLGNTV-GTLYYXAPERFSESHATYRADIYALTCVLYECLTG 231
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 96/229 (41%), Gaps = 38/229 (16%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEK------TFAAELVAVAHLR 166
+D E LGSG F V + S G A K + ++ + + E+ + ++
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 167 HRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAA 226
H N++ L ++ ++L+ + + L L + L E+ + ++ +
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-------ESLTEEEATEFLKQILN 125
Query: 227 ALHYLHEQLETQIIHRDVKTSNVML----DSQYNARLGDFGLARWLEHELQYQMRTSSAR 282
++YLH QI H D+K N+ML + ++ DFGLA H++ +
Sbjct: 126 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA----HKIDFG------- 171
Query: 283 NHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
E I GT ++ PE + ++D++S G++ ++SG
Sbjct: 172 ------NEFKNIFGTPEFVAPEIVNYEPLGL-EADMWSIGVITYILLSG 213
Score = 29.3 bits (64), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 84/219 (38%), Gaps = 32/219 (14%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHR 570
+ F+ ++ E G Y +++ +R S+ R E+ L ++H
Sbjct: 20 GSGKFAVVKKCREKSTGLQYAA-----KFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 571 NLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAIL 630
N++ L + ++++I + A L L L +K + + +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEATEFLKQILNGVY 128
Query: 631 YLHEEWNEQVIHRNITSSAITL----DPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSV 686
YLH + Q+ H ++ I L P ++ F LA K GN
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA----------HKIDFGNE-F 174
Query: 687 RGIFG---YMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
+ IFG +++PE + AD++S GV+ +++G
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 31/161 (19%)
Query: 119 LGSGGFGKV---YRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHLRHRNLVRL 173
+GSG G V Y A+L + VA+K L+ + + K ELV + + H+N++ L
Sbjct: 32 IGSGAQGIVVAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGL 88
Query: 174 RGWCVHEDQLLLVYDYMPNRSLDR------VLFRRPENLEAA--APLNWEQRKKIIRGLA 225
+ P +SL+ V+ NL L+ E+ ++ +
Sbjct: 89 LNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQML 136
Query: 226 AALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266
+ +LH IIHRD+K SN+++ S ++ DFGLAR
Sbjct: 137 VGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 69/171 (40%), Gaps = 22/171 (12%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQW 615
R EL + + H+N++ L T Q + ++ I+ L+ N ++ L
Sbjct: 69 RAYRELVLMKVVNHKNIIGLLNVFTPQKSL---EEFQDVYIVMELMDANLSQVIQMELDH 125
Query: 616 HHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHG 675
++ + I +LH + +IHR++ S I + D ++ F LA
Sbjct: 126 ERMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR-------- 174
Query: 676 HRKATSGNRSVRGIFG----YMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
T+G + + Y +PE I D++S GV++ E++ G
Sbjct: 175 ----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 31/161 (19%)
Query: 119 LGSGGFGKV---YRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHLRHRNLVRL 173
+GSG G V Y A+L + VA+K L+ + + K ELV + + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGL 88
Query: 174 RGWCVHEDQLLLVYDYMPNRSLDR------VLFRRPENLEAA--APLNWEQRKKIIRGLA 225
+ P +SL+ V+ NL L+ E+ ++ +
Sbjct: 89 LNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQML 136
Query: 226 AALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266
+ +LH IIHRD+K SN+++ S ++ DFGLAR
Sbjct: 137 CGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 68/171 (39%), Gaps = 22/171 (12%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQW 615
R EL + + H+N++ L T Q + ++ I+ L+ N ++ L
Sbjct: 69 RAYRELVLMKVVNHKNIIGLLNVFTPQKSL---EEFQDVYIVMELMDANLSQVIQMELDH 125
Query: 616 HHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHG 675
++ + I +LH + +IHR++ S I + D ++ F LA
Sbjct: 126 ERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR-------- 174
Query: 676 HRKATSGNRSVRGIFG----YMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
T+G + + Y +PE I D++S G ++ E++ G
Sbjct: 175 ----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 96/229 (41%), Gaps = 38/229 (16%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEK------TFAAELVAVAHLR 166
+D E LGSG F V + S G A K + ++ + + E+ + ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 167 HRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAA 226
H N++ L ++ ++L+ + + L L + L E+ + ++ +
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-------ESLTEEEATEFLKQILN 125
Query: 227 ALHYLHEQLETQIIHRDVKTSNVML----DSQYNARLGDFGLARWLEHELQYQMRTSSAR 282
++YLH QI H D+K N+ML + ++ DFGLA H++ +
Sbjct: 126 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA----HKIDFG------- 171
Query: 283 NHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
E I GT ++ PE + ++D++S G++ ++SG
Sbjct: 172 ------NEFKNIFGTPEFVAPEIVNYEPLGL-EADMWSIGVITYILLSG 213
Score = 29.6 bits (65), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 84/219 (38%), Gaps = 32/219 (14%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHR 570
+ F+ ++ E G Y +++ +R S+ R E+ L ++H
Sbjct: 20 GSGQFAVVKKCREKSTGLQYAA-----KFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 571 NLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAIL 630
N++ L + ++++I + A L L L +K + + +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEATEFLKQILNGVY 128
Query: 631 YLHEEWNEQVIHRNITSSAITL----DPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSV 686
YLH + Q+ H ++ I L P ++ F LA K GN
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA----------HKIDFGNE-F 174
Query: 687 RGIFG---YMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
+ IFG +++PE + AD++S GV+ +++G
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 88/223 (39%), Gaps = 35/223 (15%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE----KGERFEKTFAAELVAVAHLRHR 168
FD + LG+G FG+V G A+K L + K ++ E T + + A +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFP 101
Query: 169 NLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAAL 228
LV+L L +V +Y+ + L R E A Q +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-------IVLTF 154
Query: 229 HYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288
YLH +I+RD+K N+++D Q ++ DFG A+ ++
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------------------- 192
Query: 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
T + GT YL PE A D ++ G+++ ++ +G
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKA-VDWWALGVLIYQMAAG 234
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 17/154 (11%)
Query: 119 LGSGGFGKV---YRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHLRHRNLVRL 173
+GSG G V Y A+L + VA+K L+ + + K ELV + + H+N++ L
Sbjct: 37 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 93
Query: 174 RGWCVHEDQLLLVYD-YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
+ L D Y+ +D L + L+ E+ ++ + + +LH
Sbjct: 94 LNVFTPQKSLEEFQDVYIVMELMDANLCQV-----IQMELDHERMSYLLYQMLCGIKHLH 148
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266
IIHRD+K SN+++ S ++ DFGLAR
Sbjct: 149 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 179
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 96/229 (41%), Gaps = 38/229 (16%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEK------TFAAELVAVAHLR 166
+D E LGSG F V + S G A K + ++ + + E+ + ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 167 HRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAA 226
H N++ L ++ ++L+ + + L L + L E+ + ++ +
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-------ESLTEEEATEFLKQILN 125
Query: 227 ALHYLHEQLETQIIHRDVKTSNVML----DSQYNARLGDFGLARWLEHELQYQMRTSSAR 282
++YLH QI H D+K N+ML + ++ DFGLA H++ +
Sbjct: 126 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA----HKIDFG------- 171
Query: 283 NHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
E I GT ++ PE + ++D++S G++ ++SG
Sbjct: 172 ------NEFKNIFGTPEFVAPEIVNYEPLGL-EADMWSIGVITYILLSG 213
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 17/154 (11%)
Query: 119 LGSGGFGKV---YRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHLRHRNLVRL 173
+GSG G V Y A+L + VA+K L+ + + K ELV + + H+N++ L
Sbjct: 33 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 89
Query: 174 RGWCVHEDQLLLVYD-YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
+ L D Y+ +D L + + L+ E+ ++ + + +LH
Sbjct: 90 LNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH 144
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266
IIHRD+K SN+++ S ++ DFGLAR
Sbjct: 145 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 68/171 (39%), Gaps = 22/171 (12%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQW 615
R EL + + H+N++ L T Q + ++ I+ L+ N ++ L
Sbjct: 70 RAYRELVLMKCVNHKNIIGLLNVFTPQKSL---EEFQDVYIVMELMDANLCQVIQMELDH 126
Query: 616 HHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHG 675
++ + I +LH + +IHR++ S I + D ++ F LA
Sbjct: 127 ERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------- 175
Query: 676 HRKATSGNRSVRGIFG----YMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
T+G + + Y +PE I D++S G ++ E++ G
Sbjct: 176 ----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 96/229 (41%), Gaps = 38/229 (16%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEK------TFAAELVAVAHLR 166
+D E LGSG F V + S G A K + ++ + + E+ + ++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 167 HRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAA 226
H N++ L ++ ++L+ + + L L + L E+ + ++ +
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-------ESLTEEEATEFLKQILN 124
Query: 227 ALHYLHEQLETQIIHRDVKTSNVML----DSQYNARLGDFGLARWLEHELQYQMRTSSAR 282
++YLH QI H D+K N+ML + ++ DFGLA H++ +
Sbjct: 125 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA----HKIDFG------- 170
Query: 283 NHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
E I GT ++ PE + ++D++S G++ ++SG
Sbjct: 171 ------NEFKNIFGTPEFVAPEIVNYEPLGL-EADMWSIGVITYILLSG 212
Score = 29.3 bits (64), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 84/219 (38%), Gaps = 32/219 (14%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHR 570
+ F+ ++ E G Y +++ +R S+ R E+ L ++H
Sbjct: 19 GSGQFAVVKKCREKSTGLQYAA-----KFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 73
Query: 571 NLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAIL 630
N++ L + ++++I + A L L L +K + + +
Sbjct: 74 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEATEFLKQILNGVY 127
Query: 631 YLHEEWNEQVIHRNITSSAITL----DPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSV 686
YLH + Q+ H ++ I L P ++ F LA K GN
Sbjct: 128 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA----------HKIDFGNE-F 173
Query: 687 RGIFG---YMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
+ IFG +++PE + AD++S GV+ +++G
Sbjct: 174 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 17/154 (11%)
Query: 119 LGSGGFGKV---YRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHLRHRNLVRL 173
+GSG G V Y A+L + VA+K L+ + + K ELV + + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 174 RGWCVHEDQLLLVYD-YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
+ L D Y+ +D L + L+ E+ ++ + + +LH
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLCQV-----IQMELDHERMSYLLYQMLCGIKHLH 143
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266
IIHRD+K SN+++ S ++ DFGLAR
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 96/229 (41%), Gaps = 38/229 (16%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEK------TFAAELVAVAHLR 166
+D E LGSG F V + S G A K + ++ + + E+ + ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 167 HRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAA 226
H N++ L ++ ++L+ + + L L + L E+ + ++ +
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-------ESLTEEEATEFLKQILN 125
Query: 227 ALHYLHEQLETQIIHRDVKTSNVML----DSQYNARLGDFGLARWLEHELQYQMRTSSAR 282
++YLH QI H D+K N+ML + ++ DFGLA H++ +
Sbjct: 126 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA----HKIDFG------- 171
Query: 283 NHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
E I GT ++ PE + ++D++S G++ ++SG
Sbjct: 172 ------NEFKNIFGTPEFVAPEIVNYEPLGL-EADMWSIGVITYILLSG 213
Score = 29.3 bits (64), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 84/219 (38%), Gaps = 32/219 (14%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHR 570
+ F+ ++ E G Y +++ +R S+ R E+ L ++H
Sbjct: 20 GSGQFAVVKKCREKSTGLQYAA-----KFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 571 NLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAIL 630
N++ L + ++++I + A L L L +K + + +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEATEFLKQILNGVY 128
Query: 631 YLHEEWNEQVIHRNITSSAITL----DPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSV 686
YLH + Q+ H ++ I L P ++ F LA K GN
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA----------HKIDFGNE-F 174
Query: 687 RGIFG---YMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
+ IFG +++PE + AD++S GV+ +++G
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 96/229 (41%), Gaps = 38/229 (16%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEK------TFAAELVAVAHLR 166
+D E LGSG F V + S G A K + ++ + + E+ + ++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 167 HRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAA 226
H N++ L ++ ++L+ + + L L + L E+ + ++ +
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-------ESLTEEEATEFLKQILN 124
Query: 227 ALHYLHEQLETQIIHRDVKTSNVML----DSQYNARLGDFGLARWLEHELQYQMRTSSAR 282
++YLH QI H D+K N+ML + ++ DFGLA H++ +
Sbjct: 125 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA----HKIDFG------- 170
Query: 283 NHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
E I GT ++ PE + ++D++S G++ ++SG
Sbjct: 171 ------NEFKNIFGTPEFVAPEIVNYEPLGL-EADMWSIGVITYILLSG 212
Score = 29.3 bits (64), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 84/219 (38%), Gaps = 32/219 (14%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHR 570
+ F+ ++ E G Y +++ +R S+ R E+ L ++H
Sbjct: 19 GSGQFAVVKKCREKSTGLQYAA-----KFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 73
Query: 571 NLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAIL 630
N++ L + ++++I + A L L L +K + + +
Sbjct: 74 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEATEFLKQILNGVY 127
Query: 631 YLHEEWNEQVIHRNITSSAITL----DPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSV 686
YLH + Q+ H ++ I L P ++ F LA K GN
Sbjct: 128 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA----------HKIDFGNE-F 173
Query: 687 RGIFG---YMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
+ IFG +++PE + AD++S GV+ +++G
Sbjct: 174 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 31/161 (19%)
Query: 119 LGSGGFGKV---YRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHLRHRNLVRL 173
+GSG G V Y A+L + VA+K L+ + + K ELV + + H+N++ L
Sbjct: 26 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 82
Query: 174 RGWCVHEDQLLLVYDYMPNRSLDRV--LFRRPENLEA------AAPLNWEQRKKIIRGLA 225
+ P +SL+ ++ E ++A L+ E+ ++ +
Sbjct: 83 LNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQML 130
Query: 226 AALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266
+ +LH IIHRD+K SN+++ S ++ DFGLAR
Sbjct: 131 CGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 97/229 (42%), Gaps = 38/229 (16%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAA------ELVAVAHLR 166
+D E LGSG F V + S G A K + ++ + + + E+ + ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 167 HRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAA 226
H N++ L ++ ++L+ + + L L + L E+ + ++ +
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-------ESLTEEEATEFLKQILN 125
Query: 227 ALHYLHEQLETQIIHRDVKTSNVML----DSQYNARLGDFGLARWLEHELQYQMRTSSAR 282
++YLH QI H D+K N+ML + ++ DFGLA H++ +
Sbjct: 126 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA----HKIDFG------- 171
Query: 283 NHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
E I GT ++ PE + ++D++S G++ ++SG
Sbjct: 172 ------NEFKNIFGTPEFVAPEIVNYEPLGL-EADMWSIGVITYILLSG 213
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 76/192 (39%), Gaps = 27/192 (14%)
Query: 538 QYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRIL 597
+++ +R S+ R E+ L ++H N++ L + ++++I + A L
Sbjct: 42 KFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL 101
Query: 598 SHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITL----D 653
L L +K + + + YLH + Q+ H ++ I L
Sbjct: 102 FDFLAEKES------LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNV 152
Query: 654 PDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFG---YMSPEYIESGEATSMADVY 710
P ++ F LA K GN + IFG +++PE + AD++
Sbjct: 153 PKPRIKIIDFGLA----------HKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLEADMW 201
Query: 711 SFGVVVLEVVTG 722
S GV+ +++G
Sbjct: 202 SIGVITYILLSG 213
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 17/154 (11%)
Query: 119 LGSGGFGKV---YRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHLRHRNLVRL 173
+GSG G V Y A+L + VA+K L+ + + K ELV + + H+N++ L
Sbjct: 34 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 90
Query: 174 RGWCVHEDQLLLVYD-YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
+ L D Y+ +D L + L+ E+ ++ + + +LH
Sbjct: 91 LNVFTPQKSLEEFQDVYIVMELMDANLCQV-----IQMELDHERMSYLLYQMLCGIKHLH 145
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266
IIHRD+K SN+++ S ++ DFGLAR
Sbjct: 146 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 176
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 68/169 (40%), Gaps = 18/169 (10%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQW 615
R EL + + H+N++ L T Q + ++ I+ L+ N ++ L
Sbjct: 71 RAYRELVLMKCVNHKNIIGLLNVFTPQKSL---EEFQDVYIVMELMDANLCQVIQMELDH 127
Query: 616 HHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHG 675
++ + I +LH + +IHR++ S I + D ++ F LA
Sbjct: 128 ERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLA--------- 175
Query: 676 HRKATSGNRSVRGIFG--YMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
R A + V + Y +PE I D++S G ++ E++ G
Sbjct: 176 -RTAGTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 96/229 (41%), Gaps = 38/229 (16%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEK------TFAAELVAVAHLR 166
+D E LGSG F V + S G A K + ++ + + E+ + ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 167 HRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAA 226
H N++ L ++ ++L+ + + L L + L E+ + ++ +
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-------ESLTEEEATEFLKQILN 125
Query: 227 ALHYLHEQLETQIIHRDVKTSNVML----DSQYNARLGDFGLARWLEHELQYQMRTSSAR 282
++YLH QI H D+K N+ML + ++ DFGLA H++ +
Sbjct: 126 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA----HKIDFG------- 171
Query: 283 NHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
E I GT ++ PE + ++D++S G++ ++SG
Sbjct: 172 ------NEFKNIFGTPEFVAPEIVNYEPLGL-EADMWSIGVITYILLSG 213
Score = 29.6 bits (65), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 84/219 (38%), Gaps = 32/219 (14%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHR 570
+ F+ ++ E G Y +++ +R S+ R E+ L ++H
Sbjct: 20 GSGQFAVVKKCREKSTGLQYAA-----KFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 571 NLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAIL 630
N++ L + ++++I + A L L L +K + + +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEATEFLKQILNGVY 128
Query: 631 YLHEEWNEQVIHRNITSSAITL----DPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSV 686
YLH + Q+ H ++ I L P ++ F LA K GN
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA----------HKIDFGNE-F 174
Query: 687 RGIFG---YMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
+ IFG +++PE + AD++S GV+ +++G
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 17/154 (11%)
Query: 119 LGSGGFGKV---YRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHLRHRNLVRL 173
+GSG G V Y A+L + VA+K L+ + + K ELV + + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 174 RGWCVHEDQLLLVYD-YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
+ L D Y+ +D L + + L+ E+ ++ + + +LH
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH 143
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266
IIHRD+K SN+++ S ++ DFGLAR
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Score = 30.4 bits (67), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 68/171 (39%), Gaps = 22/171 (12%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQW 615
R EL + + H+N++ L T Q + ++ I+ L+ N ++ L
Sbjct: 69 RAYRELVLMKCVNHKNIIGLLNVFTPQKSL---EEFQDVYIVMELMDANLCQVIQMELDH 125
Query: 616 HHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHG 675
++ + I +LH + +IHR++ S I + D ++ F LA
Sbjct: 126 ERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------- 174
Query: 676 HRKATSGNRSVRGIFG----YMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
T+G + + Y +PE I D++S G ++ E++ G
Sbjct: 175 ----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 96/229 (41%), Gaps = 38/229 (16%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEK------TFAAELVAVAHLR 166
+D E LGSG F V + S G A K + ++ + + E+ + ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 167 HRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAA 226
H N++ L ++ ++L+ + + L L + L E+ + ++ +
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-------ESLTEEEATEFLKQILN 125
Query: 227 ALHYLHEQLETQIIHRDVKTSNVML----DSQYNARLGDFGLARWLEHELQYQMRTSSAR 282
++YLH QI H D+K N+ML + ++ DFGLA H++ +
Sbjct: 126 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA----HKIDFG------- 171
Query: 283 NHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
E I GT ++ PE + ++D++S G++ ++SG
Sbjct: 172 ------NEFKNIFGTPEFVAPEIVNYEPLGL-EADMWSIGVITYILLSG 213
Score = 29.3 bits (64), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 84/219 (38%), Gaps = 32/219 (14%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHR 570
+ F+ ++ E G Y +++ +R S+ R E+ L ++H
Sbjct: 20 GSGQFAVVKKCREKSTGLQYAA-----KFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 571 NLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAIL 630
N++ L + ++++I + A L L L +K + + +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEATEFLKQILNGVY 128
Query: 631 YLHEEWNEQVIHRNITSSAITL----DPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSV 686
YLH + Q+ H ++ I L P ++ F LA K GN
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA----------HKIDFGNE-F 174
Query: 687 RGIFG---YMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
+ IFG +++PE + AD++S GV+ +++G
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 17/154 (11%)
Query: 119 LGSGGFGKV---YRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHLRHRNLVRL 173
+GSG G V Y A+L + VA+K L+ + + K ELV + + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 174 RGWCVHEDQLLLVYD-YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
+ L D Y+ +D L + L+ E+ ++ + + +LH
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLCQV-----IQMELDHERMSYLLYQMLCGIKHLH 143
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266
IIHRD+K SN+++ S ++ DFGLAR
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 96/229 (41%), Gaps = 38/229 (16%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEK------TFAAELVAVAHLR 166
+D E LGSG F V + S G A K + ++ + + E+ + ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 167 HRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAA 226
H N++ L ++ ++L+ + + L L + L E+ + ++ +
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-------ESLTEEEATEFLKQILN 125
Query: 227 ALHYLHEQLETQIIHRDVKTSNVML----DSQYNARLGDFGLARWLEHELQYQMRTSSAR 282
++YLH QI H D+K N+ML + ++ DFGLA H++ +
Sbjct: 126 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA----HKIDFG------- 171
Query: 283 NHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
E I GT ++ PE + ++D++S G++ ++SG
Sbjct: 172 ------NEFKNIFGTPEFVAPEIVNYEPLGL-EADMWSIGVITYILLSG 213
Score = 29.3 bits (64), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 84/219 (38%), Gaps = 32/219 (14%)
Query: 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHR 570
+ F+ ++ E G Y +++ +R S+ R E+ L ++H
Sbjct: 20 GSGQFAVVKKCREKSTGLQYAA-----KFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 571 NLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAIL 630
N++ L + ++++I + A L L L +K + + +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEATEFLKQILNGVY 128
Query: 631 YLHEEWNEQVIHRNITSSAITL----DPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSV 686
YLH + Q+ H ++ I L P ++ F LA K GN
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA----------HKIDFGNE-F 174
Query: 687 RGIFG---YMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
+ IFG +++PE + AD++S GV+ +++G
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 17/154 (11%)
Query: 119 LGSGGFGKV---YRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHLRHRNLVRL 173
+GSG G V Y A+L + VA+K L+ + + K ELV + + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 174 RGWCVHEDQLLLVYD-YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
+ L D Y+ +D L + + L+ E+ ++ + + +LH
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH 143
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266
IIHRD+K SN+++ S ++ DFGLAR
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 17/154 (11%)
Query: 119 LGSGGFGKV---YRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHLRHRNLVRL 173
+GSG G V Y A+L + VA+K L+ + + K ELV + + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 174 RGWCVHEDQLLLVYD-YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLH 232
+ L D Y+ +D L + + L+ E+ ++ + + +LH
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH 143
Query: 233 EQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266
IIHRD+K SN+++ S ++ DFGLAR
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Score = 30.0 bits (66), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 68/171 (39%), Gaps = 22/171 (12%)
Query: 556 RFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQW 615
R EL + + H+N++ L T Q + ++ I+ L+ N ++ L
Sbjct: 69 RAYRELVLMKCVNHKNIIGLLNVFTPQKSL---EEFQDVYIVMELMDANLCQVIQMELDH 125
Query: 616 HHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHG 675
++ + I +LH + +IHR++ S I + D ++ F LA
Sbjct: 126 ERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------- 174
Query: 676 HRKATSGNRSVRGIFG----YMSPEYIESGEATSMADVYSFGVVVLEVVTG 722
T+G + + Y +PE I D++S G ++ E++ G
Sbjct: 175 ----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 96/229 (41%), Gaps = 38/229 (16%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEK------TFAAELVAVAHLR 166
+D E LGSG F V + S G A K + ++ + + E+ + ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 167 HRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAA 226
H N++ L ++ ++L+ + + L L + L E+ + ++ +
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-------ESLTEEEATEFLKQILN 125
Query: 227 ALHYLHEQLETQIIHRDVKTSNVML----DSQYNARLGDFGLARWLEHELQYQMRTSSAR 282
++YLH QI H D+K N+ML + ++ DFGLA H++ +
Sbjct: 126 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA----HKIDFG------- 171
Query: 283 NHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
E I GT ++ PE + ++D++S G++ ++SG
Sbjct: 172 ------NEFKNIFGTPEFVAPEIVNYEPLGL-EADMWSIGVITYILLSG 213
Score = 29.3 bits (64), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 76/192 (39%), Gaps = 27/192 (14%)
Query: 538 QYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRIL 597
+++ +R S+ R E+ L ++H N++ L + ++++I + A L
Sbjct: 42 KFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL 101
Query: 598 SHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITL----D 653
L L +K + + + YLH + Q+ H ++ I L
Sbjct: 102 FDFLAEKES------LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNV 152
Query: 654 PDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFG---YMSPEYIESGEATSMADVY 710
P ++ F LA K GN + IFG +++PE + AD++
Sbjct: 153 PKPRIKIIDFGLA----------HKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMW 201
Query: 711 SFGVVVLEVVTG 722
S GV+ +++G
Sbjct: 202 SIGVITYILLSG 213
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 96/229 (41%), Gaps = 38/229 (16%)
Query: 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEK------TFAAELVAVAHLR 166
+D E LGSG F V + S G A K + ++ + + E+ + ++
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 167 HRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAA 226
H N++ L ++ ++L+ + + L L + L E+ + ++ +
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-------ESLTEEEATEFLKQILN 125
Query: 227 ALHYLHEQLETQIIHRDVKTSNVML----DSQYNARLGDFGLARWLEHELQYQMRTSSAR 282
++YLH QI H D+K N+ML + ++ DFGLA H++ +
Sbjct: 126 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA----HKIDFG------- 171
Query: 283 NHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSG 331
E I GT ++ PE + ++D++S G++ ++SG
Sbjct: 172 ------NEFKNIFGTPEFVAPEIVNYEPLGL-EADMWSIGVITYILLSG 213
Score = 29.3 bits (64), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 76/192 (39%), Gaps = 27/192 (14%)
Query: 538 QYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRIL 597
+++ +R S+ R E+ L ++H N++ L + ++++I + A L
Sbjct: 42 KFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL 101
Query: 598 SHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITL----D 653
L L +K + + + YLH + Q+ H ++ I L
Sbjct: 102 FDFLAEKES------LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNV 152
Query: 654 PDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFG---YMSPEYIESGEATSMADVY 710
P ++ F LA K GN + IFG +++PE + AD++
Sbjct: 153 PKPRIKIIDFGLA----------HKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLEADMW 201
Query: 711 SFGVVVLEVVTG 722
S GV+ +++G
Sbjct: 202 SIGVITYILLSG 213
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 16/172 (9%)
Query: 97 NPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCL-----AEKGERF 151
P + E+ + + F+ +V+G G F +V + G V A+K + ++GE
Sbjct: 47 EPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEV- 105
Query: 152 EKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAP 211
F E + + R + +L E+ L LV +Y L +L + E + A
Sbjct: 106 -SCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPA--- 161
Query: 212 LNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFG 263
E + + + A+ +H +HRD+K N++LD + RL DFG
Sbjct: 162 ---EMARFYLAEIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLADFG 207
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 221 IRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNA-RLGDFGLARWLEHELQYQMRTS 279
I L AL Y H Q I+HRDVK NVM+D + RL D+GLA + +Y +R +
Sbjct: 133 IYELLKALDYCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 189
Query: 280 S 280
S
Sbjct: 190 S 190
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 221 IRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNA-RLGDFGLARWLEHELQYQMRTS 279
I L AL Y H Q I+HRDVK NVM+D + RL D+GLA + +Y +R +
Sbjct: 131 IYELLKALDYCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 187
Query: 280 S 280
S
Sbjct: 188 S 188
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 221 IRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNA-RLGDFGLARWLEHELQYQMRTS 279
I L AL Y H Q I+HRDVK NVM+D + RL D+GLA + +Y +R +
Sbjct: 132 IYELLKALDYCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 188
Query: 280 S 280
S
Sbjct: 189 S 189
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 221 IRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNA-RLGDFGLARWLEHELQYQMRTS 279
I L AL Y H Q I+HRDVK NVM+D + RL D+GLA + +Y +R +
Sbjct: 131 IYELLKALDYCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 187
Query: 280 S 280
S
Sbjct: 188 S 188
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 221 IRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNA-RLGDFGLARWLEHELQYQMRTS 279
I L AL Y H Q I+HRDVK NVM+D + RL D+GLA + +Y +R +
Sbjct: 131 IYELLKALDYCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 187
Query: 280 S 280
S
Sbjct: 188 S 188
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 221 IRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNA-RLGDFGLARWLEHELQYQMRTS 279
I L AL Y H Q I+HRDVK NVM+D + RL D+GLA + +Y +R +
Sbjct: 131 IYELLKALDYCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 187
Query: 280 S 280
S
Sbjct: 188 S 188
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 221 IRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNA-RLGDFGLARWLEHELQYQMRTS 279
I L AL Y H Q I+HRDVK NVM+D + RL D+GLA + +Y +R +
Sbjct: 152 IYELLKALDYCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 208
Query: 280 S 280
S
Sbjct: 209 S 209
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 221 IRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNA-RLGDFGLARWLEHELQYQMRTS 279
I L AL Y H Q I+HRDVK NVM+D + RL D+GLA + +Y +R +
Sbjct: 131 IYELLKALDYCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 187
Query: 280 S 280
S
Sbjct: 188 S 188
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,182,048
Number of Sequences: 62578
Number of extensions: 921701
Number of successful extensions: 5716
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 220
Number of HSP's that attempted gapping in prelim test: 2038
Number of HSP's gapped (non-prelim): 1974
length of query: 834
length of database: 14,973,337
effective HSP length: 107
effective length of query: 727
effective length of database: 8,277,491
effective search space: 6017735957
effective search space used: 6017735957
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)