Query 003278
Match_columns 834
No_of_seqs 701 out of 5954
Neff 8.4
Searched_HMMs 46136
Date Thu Mar 28 20:28:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003278.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003278hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 100.0 3.4E-61 7.3E-66 528.2 27.3 288 97-408 61-352 (361)
2 KOG1187 Serine/threonine prote 100.0 7.9E-60 1.7E-64 517.3 27.6 287 499-799 61-354 (361)
3 KOG0603 Ribosomal protein S6 k 100.0 1.5E-52 3.3E-57 460.0 21.8 546 118-792 1-562 (612)
4 KOG0192 Tyrosine kinase specif 100.0 7.8E-50 1.7E-54 435.1 22.4 260 519-806 47-312 (362)
5 KOG0192 Tyrosine kinase specif 100.0 5E-47 1.1E-51 413.1 23.7 255 112-408 42-303 (362)
6 KOG0581 Mitogen-activated prot 100.0 4.5E-46 9.8E-51 385.8 23.7 253 113-404 81-335 (364)
7 KOG0581 Mitogen-activated prot 100.0 7.6E-46 1.6E-50 384.2 21.9 257 502-792 75-334 (364)
8 KOG0197 Tyrosine kinases [Sign 100.0 3.5E-46 7.6E-51 404.2 19.9 250 519-798 212-462 (468)
9 KOG0595 Serine/threonine-prote 100.0 7.2E-46 1.6E-50 387.0 20.5 200 111-338 10-217 (429)
10 KOG0595 Serine/threonine-prote 100.0 3.8E-45 8.1E-50 381.6 18.9 207 513-736 10-224 (429)
11 KOG0591 NIMA (never in mitosis 100.0 5E-46 1.1E-50 368.9 8.5 260 112-407 20-284 (375)
12 KOG0615 Serine/threonine prote 100.0 1.2E-44 2.6E-49 376.8 17.3 254 111-404 172-437 (475)
13 KOG0575 Polo-like serine/threo 100.0 4.2E-44 9.1E-49 391.2 22.2 249 111-404 18-269 (592)
14 KOG4721 Serine/threonine prote 100.0 8.9E-45 1.9E-49 388.0 13.7 275 500-821 118-394 (904)
15 KOG0197 Tyrosine kinases [Sign 100.0 1.3E-43 2.9E-48 384.1 19.3 254 113-409 208-462 (468)
16 KOG0591 NIMA (never in mitosis 100.0 6E-45 1.3E-49 361.2 6.4 256 514-792 20-280 (375)
17 KOG0598 Ribosomal protein S6 k 100.0 2E-43 4.4E-48 366.1 18.0 245 109-397 23-270 (357)
18 KOG0193 Serine/threonine prote 100.0 3.2E-43 6.9E-48 381.8 19.2 266 500-799 386-655 (678)
19 KOG0575 Polo-like serine/threo 100.0 6.3E-43 1.4E-47 382.0 20.3 247 514-792 19-268 (592)
20 KOG1026 Nerve growth factor re 100.0 1.2E-43 2.7E-48 401.7 15.3 257 517-796 490-761 (774)
21 KOG0593 Predicted protein kina 100.0 3.7E-43 8E-48 351.8 16.0 265 112-403 3-283 (396)
22 KOG1026 Nerve growth factor re 100.0 1.6E-42 3.4E-47 392.8 15.7 266 108-408 483-762 (774)
23 KOG0198 MEKK and related serin 100.0 1.2E-41 2.5E-46 359.9 19.8 258 111-405 17-277 (313)
24 KOG1094 Discoidin domain recep 100.0 6.5E-41 1.4E-45 360.3 21.3 259 518-796 543-803 (807)
25 cd05102 PTKc_VEGFR3 Catalytic 100.0 4.4E-41 9.5E-46 371.3 20.6 263 513-797 7-334 (338)
26 KOG0615 Serine/threonine prote 100.0 9.6E-42 2.1E-46 355.2 14.2 250 515-792 174-436 (475)
27 KOG1095 Protein tyrosine kinas 100.0 3.1E-41 6.6E-46 395.7 19.4 261 518-801 697-965 (1025)
28 cd05102 PTKc_VEGFR3 Catalytic 100.0 7.7E-41 1.7E-45 369.3 21.3 266 109-408 5-334 (338)
29 KOG0194 Protein tyrosine kinas 100.0 1.8E-41 4E-46 373.6 15.6 254 519-802 163-425 (474)
30 KOG1035 eIF-2alpha kinase GCN2 100.0 1.2E-40 2.5E-45 385.6 22.7 498 155-792 229-870 (1351)
31 KOG0661 MAPK related serine/th 100.0 4.2E-42 9E-47 363.7 8.9 265 111-404 10-291 (538)
32 KOG0600 Cdc2-related protein k 100.0 6.6E-41 1.4E-45 357.1 17.0 267 110-404 116-400 (560)
33 PHA02988 hypothetical protein; 100.0 4.1E-40 8.9E-45 354.2 23.3 260 500-797 12-279 (283)
34 KOG0592 3-phosphoinositide-dep 100.0 1.2E-40 2.5E-45 357.9 18.1 266 107-404 69-338 (604)
35 KOG0198 MEKK and related serin 100.0 7.1E-41 1.5E-45 353.9 16.2 253 514-793 18-276 (313)
36 KOG0582 Ste20-like serine/thre 100.0 2.2E-40 4.7E-45 348.2 19.4 263 514-792 27-292 (516)
37 PHA02988 hypothetical protein; 100.0 5.3E-40 1.1E-44 353.3 22.3 261 97-408 11-279 (283)
38 KOG4721 Serine/threonine prote 100.0 5.4E-41 1.2E-45 359.1 14.1 240 114-406 127-366 (904)
39 KOG0605 NDR and related serine 100.0 3.5E-40 7.6E-45 354.9 20.4 264 107-397 137-435 (550)
40 cd05096 PTKc_DDR1 Catalytic do 100.0 1.1E-39 2.5E-44 354.4 24.7 266 514-795 6-303 (304)
41 KOG0616 cAMP-dependent protein 100.0 1.3E-40 2.9E-45 333.2 15.6 199 111-339 44-245 (355)
42 cd05096 PTKc_DDR1 Catalytic do 100.0 1.5E-39 3.2E-44 353.6 23.8 267 111-406 5-303 (304)
43 KOG0583 Serine/threonine prote 100.0 8.5E-40 1.8E-44 359.8 20.9 249 109-403 15-274 (370)
44 KOG0582 Ste20-like serine/thre 100.0 8.1E-40 1.8E-44 343.8 19.7 268 109-404 24-293 (516)
45 KOG0598 Ribosomal protein S6 k 100.0 3.6E-40 7.7E-45 342.0 16.5 243 513-786 25-270 (357)
46 cd05104 PTKc_Kit Catalytic dom 100.0 1.6E-39 3.5E-44 363.5 22.1 262 513-796 35-373 (375)
47 KOG0578 p21-activated serine/t 100.0 3.5E-40 7.6E-45 357.7 15.6 250 112-404 274-523 (550)
48 KOG0196 Tyrosine kinase, EPH ( 100.0 4.2E-41 9.1E-46 372.7 8.2 267 502-797 609-891 (996)
49 KOG0597 Serine-threonine prote 100.0 3.6E-40 7.9E-45 353.3 14.5 248 111-404 2-251 (808)
50 cd05631 STKc_GRK4 Catalytic do 100.0 2.3E-39 5.1E-44 348.7 20.9 252 112-403 1-260 (285)
51 KOG0659 Cdk activating kinase 100.0 8.5E-40 1.8E-44 322.9 15.9 262 112-404 3-281 (318)
52 KOG0194 Protein tyrosine kinas 100.0 1.1E-39 2.4E-44 359.5 18.5 258 110-409 156-421 (474)
53 cd05106 PTKc_CSF-1R Catalytic 100.0 2.6E-39 5.6E-44 361.7 21.7 262 513-796 38-371 (374)
54 KOG0193 Serine/threonine prote 100.0 1E-39 2.2E-44 354.7 17.5 269 101-409 382-654 (678)
55 KOG0593 Predicted protein kina 100.0 5.7E-40 1.2E-44 329.0 13.5 262 514-792 3-283 (396)
56 KOG0201 Serine/threonine prote 100.0 1.5E-40 3.3E-45 349.5 9.8 249 112-404 14-263 (467)
57 KOG1095 Protein tyrosine kinas 100.0 4.2E-39 9.1E-44 377.7 22.6 265 110-409 691-962 (1025)
58 cd06649 PKc_MEK2 Catalytic dom 100.0 7.7E-39 1.7E-43 352.3 23.4 200 110-337 4-204 (331)
59 cd05631 STKc_GRK4 Catalytic do 100.0 7.7E-39 1.7E-43 344.7 22.6 251 515-792 2-260 (285)
60 cd05104 PTKc_Kit Catalytic dom 100.0 3.3E-39 7.1E-44 361.1 20.5 264 110-407 34-373 (375)
61 KOG0196 Tyrosine kinase, EPH ( 100.0 1.6E-39 3.5E-44 360.2 17.5 269 99-409 608-892 (996)
62 PF07714 Pkinase_Tyr: Protein 100.0 1.8E-39 3.9E-44 344.5 17.3 249 519-794 5-259 (259)
63 KOG0580 Serine/threonine prote 100.0 5.4E-40 1.2E-44 320.0 11.8 249 111-404 22-273 (281)
64 cd05064 PTKc_EphR_A10 Catalyti 100.0 8.6E-39 1.9E-43 340.6 22.3 255 513-796 5-264 (266)
65 KOG0578 p21-activated serine/t 100.0 1.9E-39 4.1E-44 352.1 17.0 249 513-792 273-522 (550)
66 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 6.4E-39 1.4E-43 353.3 21.1 254 111-404 1-257 (333)
67 PLN00113 leucine-rich repeat r 100.0 2.3E-38 4.9E-43 396.9 28.4 269 100-408 682-951 (968)
68 cd05106 PTKc_CSF-1R Catalytic 100.0 4.2E-39 9.2E-44 359.9 19.3 265 110-408 37-372 (374)
69 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.1E-38 2.4E-43 339.8 20.6 256 110-407 4-264 (266)
70 PTZ00263 protein kinase A cata 100.0 1.2E-38 2.6E-43 350.5 21.3 239 111-397 18-259 (329)
71 cd06650 PKc_MEK1 Catalytic dom 100.0 2.7E-38 5.8E-43 348.2 23.9 202 109-338 3-205 (333)
72 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.2E-38 2.6E-43 358.1 21.3 263 513-797 37-397 (400)
73 KOG0583 Serine/threonine prote 100.0 2.3E-38 4.9E-43 348.5 22.7 249 512-791 16-273 (370)
74 cd05612 STKc_PRKX_like Catalyt 100.0 4E-39 8.8E-44 347.9 16.5 245 111-403 1-253 (291)
75 cd05585 STKc_YPK1_like Catalyt 100.0 2.2E-38 4.7E-43 345.8 22.2 242 119-405 1-245 (312)
76 cd05571 STKc_PKB Catalytic dom 100.0 1.1E-38 2.4E-43 349.8 19.8 242 117-403 1-250 (323)
77 cd05048 PTKc_Ror Catalytic Dom 100.0 2.3E-38 4.9E-43 340.2 21.4 260 514-796 6-282 (283)
78 KOG0201 Serine/threonine prote 100.0 9.2E-40 2E-44 343.6 10.0 248 514-792 14-262 (467)
79 cd06649 PKc_MEK2 Catalytic dom 100.0 3.7E-38 8.1E-43 346.9 23.0 199 513-728 5-204 (331)
80 cd05108 PTKc_EGFR Catalytic do 100.0 1.2E-38 2.6E-43 348.4 18.9 258 513-799 7-270 (316)
81 cd05610 STKc_MASTL Catalytic d 100.0 9.5E-38 2.1E-42 372.3 27.0 188 111-324 4-194 (669)
82 cd07848 STKc_CDKL5 Catalytic d 100.0 1.7E-38 3.7E-43 342.0 18.6 267 111-403 1-283 (287)
83 KOG0663 Protein kinase PITSLRE 100.0 2E-38 4.4E-43 321.9 17.9 263 111-404 76-361 (419)
84 PLN00034 mitogen-activated pro 100.0 2.1E-37 4.5E-42 344.0 27.8 246 515-792 76-327 (353)
85 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.7E-38 3.7E-43 342.5 18.3 264 111-403 5-284 (288)
86 PLN00034 mitogen-activated pro 100.0 1.7E-38 3.6E-43 352.8 18.6 250 111-404 74-328 (353)
87 KOG4278 Protein tyrosine kinas 100.0 6.2E-39 1.4E-43 345.5 14.4 252 517-797 271-523 (1157)
88 cd05108 PTKc_EGFR Catalytic do 100.0 3.4E-38 7.5E-43 344.8 20.5 257 111-409 7-269 (316)
89 cd05048 PTKc_Ror Catalytic Dom 100.0 4.8E-38 1E-42 337.7 21.2 262 111-407 5-282 (283)
90 cd05114 PTKc_Tec_Rlk Catalytic 100.0 3.5E-38 7.7E-43 333.6 19.9 251 514-795 5-256 (256)
91 PTZ00426 cAMP-dependent protei 100.0 3.3E-38 7.1E-43 348.1 20.2 245 111-403 30-283 (340)
92 KOG0600 Cdc2-related protein k 100.0 3.8E-38 8.3E-43 336.0 19.6 202 513-729 117-323 (560)
93 cd05593 STKc_PKB_gamma Catalyt 100.0 2.6E-38 5.7E-43 347.5 19.0 243 117-404 1-251 (328)
94 cd05618 STKc_aPKC_iota Catalyt 100.0 7.8E-38 1.7E-42 343.9 22.8 244 117-398 1-250 (329)
95 cd05588 STKc_aPKC Catalytic do 100.0 1.1E-37 2.4E-42 342.8 23.7 244 117-398 1-250 (329)
96 KOG4279 Serine/threonine prote 100.0 1.9E-38 4.1E-43 345.6 17.3 248 117-404 581-832 (1226)
97 cd05585 STKc_YPK1_like Catalyt 100.0 6E-38 1.3E-42 342.3 21.4 243 521-795 1-246 (312)
98 cd05595 STKc_PKB_beta Catalyti 100.0 2.3E-38 5E-43 347.3 18.2 242 117-403 1-250 (323)
99 PTZ00267 NIMA-related protein 100.0 2.2E-38 4.8E-43 365.2 18.8 254 113-404 69-323 (478)
100 cd05105 PTKc_PDGFR_alpha Catal 100.0 5.3E-38 1.1E-42 352.9 21.4 265 110-408 36-397 (400)
101 KOG0694 Serine/threonine prote 100.0 1.8E-38 3.8E-43 350.7 16.7 246 107-398 364-613 (694)
102 cd05626 STKc_LATS2 Catalytic d 100.0 1.3E-37 2.9E-42 349.2 24.2 268 112-404 2-305 (381)
103 cd05599 STKc_NDR_like Catalyti 100.0 2.6E-37 5.6E-42 344.8 25.7 268 111-404 1-296 (364)
104 cd05601 STKc_CRIK Catalytic do 100.0 1.6E-37 3.4E-42 341.8 23.3 255 111-404 1-263 (330)
105 cd07869 STKc_PFTAIRE1 Catalyti 100.0 4.1E-38 8.9E-43 342.1 18.4 266 110-403 4-287 (303)
106 cd06650 PKc_MEK1 Catalytic dom 100.0 1.8E-37 3.9E-42 341.6 23.7 200 513-729 5-205 (333)
107 PF07714 Pkinase_Tyr: Protein 100.0 2.7E-38 5.8E-43 335.5 16.4 250 116-405 4-259 (259)
108 cd05596 STKc_ROCK Catalytic do 100.0 9.1E-38 2E-42 348.8 21.5 258 107-404 39-304 (370)
109 KOG2345 Serine/threonine prote 100.0 6.2E-39 1.3E-43 313.8 10.4 276 107-407 17-299 (302)
110 cd05111 PTK_HER3 Pseudokinase 100.0 7.8E-38 1.7E-42 335.7 20.0 256 513-797 7-268 (279)
111 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.1E-37 2.4E-42 329.9 20.7 252 111-406 4-256 (256)
112 PLN00113 leucine-rich repeat r 100.0 1.2E-37 2.7E-42 390.3 24.8 268 502-799 682-953 (968)
113 KOG0589 Serine/threonine prote 100.0 2.1E-38 4.5E-43 343.0 15.2 252 111-404 4-258 (426)
114 cd05628 STKc_NDR1 Catalytic do 100.0 7.4E-38 1.6E-42 349.0 20.2 216 111-337 1-238 (363)
115 cd05062 PTKc_IGF-1R Catalytic 100.0 9.6E-38 2.1E-42 334.5 20.2 264 108-406 3-276 (277)
116 KOG0592 3-phosphoinositide-dep 100.0 5.2E-38 1.1E-42 337.6 17.9 256 512-792 72-337 (604)
117 KOG0580 Serine/threonine prote 100.0 1.3E-38 2.9E-43 310.3 12.0 248 513-792 22-272 (281)
118 KOG0585 Ca2+/calmodulin-depend 100.0 9E-38 1.9E-42 330.2 19.2 261 108-406 94-374 (576)
119 cd05054 PTKc_VEGFR Catalytic d 100.0 1.1E-37 2.3E-42 343.8 20.8 261 514-796 8-332 (337)
120 cd05594 STKc_PKB_alpha Catalyt 100.0 4E-38 8.7E-43 345.7 17.4 244 117-404 1-252 (325)
121 cd05062 PTKc_IGF-1R Catalytic 100.0 1.6E-37 3.5E-42 332.7 21.7 262 511-795 4-276 (277)
122 cd05614 STKc_MSK2_N N-terminal 100.0 1.1E-37 2.4E-42 343.2 21.0 253 112-403 1-266 (332)
123 cd05072 PTKc_Lyn Catalytic dom 100.0 1.1E-37 2.3E-42 330.9 20.1 254 513-796 6-260 (261)
124 cd05617 STKc_aPKC_zeta Catalyt 100.0 2.7E-37 5.8E-42 339.4 23.9 245 117-399 1-249 (327)
125 KOG0597 Serine-threonine prote 100.0 1.3E-38 2.9E-43 341.4 13.0 246 514-792 3-250 (808)
126 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.6E-37 3.4E-42 333.9 21.4 267 516-797 7-281 (283)
127 cd05033 PTKc_EphR Catalytic do 100.0 1.6E-37 3.5E-42 330.5 21.3 256 513-796 4-264 (266)
128 PTZ00263 protein kinase A cata 100.0 9.7E-38 2.1E-42 343.2 20.0 244 513-791 18-269 (329)
129 cd05612 STKc_PRKX_like Catalyt 100.0 7.7E-38 1.7E-42 338.0 18.8 244 514-792 2-253 (291)
130 cd05571 STKc_PKB Catalytic dom 100.0 7.9E-38 1.7E-42 343.0 19.2 241 520-792 2-250 (323)
131 cd05049 PTKc_Trk Catalytic dom 100.0 2.5E-37 5.4E-42 331.5 22.5 260 513-795 5-279 (280)
132 PTZ00283 serine/threonine prot 100.0 8.4E-38 1.8E-42 360.7 20.2 261 106-404 27-297 (496)
133 cd05036 PTKc_ALK_LTK Catalytic 100.0 6.3E-38 1.4E-42 335.9 17.8 263 109-406 4-276 (277)
134 cd08228 STKc_Nek6 Catalytic do 100.0 2E-37 4.3E-42 329.8 21.5 260 111-407 2-264 (267)
135 cd06619 PKc_MKK5 Catalytic dom 100.0 3.7E-37 8E-42 330.4 23.6 250 112-404 2-253 (279)
136 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.3E-37 2.9E-42 342.8 20.6 251 514-792 2-256 (333)
137 cd05090 PTKc_Ror1 Catalytic do 100.0 1.3E-37 2.9E-42 334.4 20.1 260 514-796 6-282 (283)
138 cd05093 PTKc_TrkB Catalytic do 100.0 1.8E-37 4E-42 334.4 21.1 264 110-408 4-279 (288)
139 cd05621 STKc_ROCK2 Catalytic d 100.0 2.6E-37 5.6E-42 344.9 23.0 259 106-404 38-304 (370)
140 cd05111 PTK_HER3 Pseudokinase 100.0 1.7E-37 3.8E-42 333.0 20.7 257 111-409 7-269 (279)
141 cd06646 STKc_MAP4K5 Catalytic 100.0 2.1E-37 4.5E-42 329.8 21.2 256 111-405 9-266 (267)
142 cd05052 PTKc_Abl Catalytic dom 100.0 8.2E-38 1.8E-42 332.3 18.0 256 111-408 6-262 (263)
143 cd05097 PTKc_DDR_like Catalyti 100.0 4.5E-37 9.6E-42 332.6 24.0 267 513-795 5-294 (295)
144 cd05584 STKc_p70S6K Catalytic 100.0 3.2E-37 7E-42 338.2 23.1 242 117-403 2-255 (323)
145 cd05084 PTKc_Fes Catalytic dom 100.0 1.5E-37 3.2E-42 328.0 19.7 249 519-795 1-251 (252)
146 cd05054 PTKc_VEGFR Catalytic d 100.0 2.1E-37 4.5E-42 341.5 21.5 264 111-408 7-333 (337)
147 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.4E-37 3E-42 333.0 19.4 241 118-406 2-274 (274)
148 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.8E-37 3.9E-42 342.2 20.9 264 112-403 1-289 (338)
149 cd05115 PTKc_Zap-70 Catalytic 100.0 2.2E-37 4.7E-42 328.2 20.6 250 520-797 2-255 (257)
150 cd05629 STKc_NDR_like_fungal C 100.0 2.9E-37 6.3E-42 346.0 22.8 268 111-404 1-305 (377)
151 cd05097 PTKc_DDR_like Catalyti 100.0 3.2E-37 6.9E-42 333.7 22.1 268 110-406 4-294 (295)
152 cd05045 PTKc_RET Catalytic dom 100.0 2E-37 4.2E-42 334.5 20.4 260 515-797 2-286 (290)
153 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 4E-37 8.6E-42 328.2 22.4 256 520-795 2-268 (269)
154 cd05573 STKc_ROCK_NDR_like Cat 100.0 2.4E-37 5.1E-42 343.1 21.3 268 111-404 1-285 (350)
155 cd05107 PTKc_PDGFR_beta Cataly 100.0 3.1E-37 6.6E-42 346.5 22.4 261 514-796 38-398 (401)
156 cd07862 STKc_CDK6 Catalytic do 100.0 1.3E-37 2.9E-42 335.6 18.7 262 112-403 2-286 (290)
157 cd06624 STKc_ASK Catalytic dom 100.0 3.8E-37 8.2E-42 328.1 21.9 260 105-404 2-265 (268)
158 cd05063 PTKc_EphR_A2 Catalytic 100.0 2.4E-37 5.2E-42 329.5 20.3 258 512-796 4-266 (268)
159 cd05049 PTKc_Trk Catalytic dom 100.0 1.6E-37 3.5E-42 332.9 19.1 262 110-406 4-279 (280)
160 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.8E-37 3.9E-42 328.5 19.2 251 514-795 5-256 (256)
161 cd05605 STKc_GRK4_like Catalyt 100.0 2.6E-37 5.7E-42 332.7 20.7 252 112-403 1-260 (285)
162 cd05591 STKc_nPKC_epsilon Cata 100.0 2.4E-37 5.2E-42 339.0 20.8 236 117-397 1-240 (321)
163 cd05603 STKc_SGK2 Catalytic do 100.0 8.3E-37 1.8E-41 334.7 25.1 238 117-399 1-242 (321)
164 cd05575 STKc_SGK Catalytic dom 100.0 8.4E-37 1.8E-41 334.9 24.9 239 117-400 1-243 (323)
165 PTZ00426 cAMP-dependent protei 100.0 1.1E-37 2.4E-42 344.0 18.0 245 513-792 30-283 (340)
166 cd07848 STKc_CDKL5 Catalytic d 100.0 2.6E-37 5.7E-42 332.8 20.4 263 514-792 2-283 (287)
167 cd05616 STKc_cPKC_beta Catalyt 100.0 1.4E-37 3.1E-42 341.1 18.6 242 112-398 1-246 (323)
168 KOG0594 Protein kinase PCTAIRE 100.0 1.6E-37 3.4E-42 322.5 17.8 267 112-404 12-302 (323)
169 cd05592 STKc_nPKC_theta_delta 100.0 1.5E-37 3.2E-42 339.8 18.6 239 117-400 1-243 (316)
170 cd07871 STKc_PCTAIRE3 Catalyti 100.0 3.6E-37 7.8E-42 332.2 21.3 264 513-792 5-284 (288)
171 cd05589 STKc_PKN Catalytic dom 100.0 3.1E-37 6.8E-42 338.5 21.2 241 113-399 1-247 (324)
172 cd08529 STKc_FA2-like Catalyti 100.0 8.8E-37 1.9E-41 322.4 23.8 251 112-404 1-253 (256)
173 KOG0611 Predicted serine/threo 100.0 2.7E-38 5.8E-43 326.6 11.8 250 111-406 53-305 (668)
174 cd05590 STKc_nPKC_eta Catalyti 100.0 2.9E-37 6.4E-42 338.0 20.8 239 117-400 1-243 (320)
175 cd05063 PTKc_EphR_A2 Catalytic 100.0 4.5E-37 9.8E-42 327.4 21.5 259 109-407 3-266 (268)
176 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 7.8E-38 1.7E-42 331.6 15.5 242 117-406 1-258 (258)
177 cd06615 PKc_MEK Catalytic doma 100.0 4.8E-37 1E-41 334.5 22.0 259 111-404 1-287 (308)
178 cd05622 STKc_ROCK1 Catalytic d 100.0 5.9E-37 1.3E-41 342.3 23.2 263 102-404 34-304 (371)
179 cd06637 STKc_TNIK Catalytic do 100.0 3.8E-37 8.3E-42 328.6 20.8 255 108-403 3-268 (272)
180 cd05608 STKc_GRK1 Catalytic do 100.0 3.8E-37 8.2E-42 330.6 20.9 244 119-399 1-247 (280)
181 cd05084 PTKc_Fes Catalytic dom 100.0 2.2E-37 4.8E-42 326.6 18.7 249 117-406 1-251 (252)
182 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 4E-37 8.6E-42 327.1 20.7 241 117-405 1-261 (262)
183 KOG1989 ARK protein kinase fam 100.0 6E-37 1.3E-41 349.4 23.5 276 106-414 32-317 (738)
184 cd05593 STKc_PKB_gamma Catalyt 100.0 2.7E-37 5.9E-42 339.5 20.1 242 519-792 1-250 (328)
185 cd05595 STKc_PKB_beta Catalyti 100.0 2E-37 4.4E-42 339.7 18.9 241 520-792 2-250 (323)
186 cd05072 PTKc_Lyn Catalytic dom 100.0 3.8E-37 8.3E-42 326.6 20.4 255 110-407 5-260 (261)
187 cd05051 PTKc_DDR Catalytic dom 100.0 1E-36 2.3E-41 329.5 24.2 267 513-795 5-295 (296)
188 cd07869 STKc_PFTAIRE1 Catalyti 100.0 5.5E-37 1.2E-41 333.2 22.1 265 512-792 4-287 (303)
189 cd08229 STKc_Nek7 Catalytic do 100.0 3.2E-37 6.9E-42 328.2 19.8 261 111-408 2-265 (267)
190 cd05053 PTKc_FGFR Catalytic do 100.0 3.3E-37 7.1E-42 333.1 20.1 262 513-797 12-291 (293)
191 cd05626 STKc_LATS2 Catalytic d 100.0 3.9E-37 8.5E-42 345.4 21.5 260 514-792 2-304 (381)
192 cd05619 STKc_nPKC_theta Cataly 100.0 2.3E-37 5.1E-42 338.1 19.2 241 117-402 1-246 (316)
193 cd05587 STKc_cPKC Catalytic do 100.0 4.2E-37 9.1E-42 337.5 21.2 242 112-398 1-246 (324)
194 cd05094 PTKc_TrkC Catalytic do 100.0 3.7E-37 8E-42 332.6 20.4 263 111-408 5-282 (291)
195 KOG0658 Glycogen synthase kina 100.0 6E-38 1.3E-42 324.7 13.5 261 112-403 25-305 (364)
196 cd05085 PTKc_Fer Catalytic dom 100.0 5.1E-37 1.1E-41 323.3 20.9 247 520-795 2-249 (250)
197 cd05035 PTKc_Axl_like Catalyti 100.0 8E-37 1.7E-41 325.9 22.6 259 113-407 1-271 (273)
198 cd05053 PTKc_FGFR Catalytic do 100.0 2.7E-37 5.9E-42 333.7 19.2 268 106-408 7-291 (293)
199 cd05091 PTKc_Ror2 Catalytic do 100.0 5.5E-37 1.2E-41 329.6 21.4 259 515-796 7-282 (283)
200 KOG4278 Protein tyrosine kinas 100.0 8.1E-38 1.8E-42 336.9 14.8 259 104-407 260-522 (1157)
201 cd05598 STKc_LATS Catalytic do 100.0 1.4E-36 3.1E-41 340.3 25.7 217 111-338 1-247 (376)
202 cd05075 PTKc_Axl Catalytic dom 100.0 5.7E-37 1.2E-41 327.2 21.3 257 517-796 3-270 (272)
203 cd05052 PTKc_Abl Catalytic dom 100.0 5.2E-37 1.1E-41 326.2 20.9 254 514-797 7-262 (263)
204 cd05090 PTKc_Ror1 Catalytic do 100.0 2.5E-37 5.3E-42 332.4 18.6 262 111-407 5-282 (283)
205 cd08228 STKc_Nek6 Catalytic do 100.0 8.2E-37 1.8E-41 325.1 22.3 261 513-797 2-265 (267)
206 cd05604 STKc_SGK3 Catalytic do 100.0 9.1E-37 2E-41 335.0 23.4 244 117-405 1-248 (325)
207 cd05042 PTKc_Aatyk Catalytic d 100.0 1.4E-36 3E-41 323.9 24.0 256 520-795 2-268 (269)
208 cd05607 STKc_GRK7 Catalytic do 100.0 7.3E-37 1.6E-41 327.9 21.9 248 119-405 1-251 (277)
209 cd05582 STKc_RSK_N N-terminal 100.0 4.5E-37 9.8E-42 336.3 20.6 239 117-400 2-245 (318)
210 cd05116 PTKc_Syk Catalytic dom 100.0 4.6E-37 9.9E-42 325.4 20.0 249 520-797 2-255 (257)
211 cd05107 PTKc_PDGFR_beta Cataly 100.0 4.1E-37 8.9E-42 345.5 20.8 267 108-408 34-399 (401)
212 cd05036 PTKc_ALK_LTK Catalytic 100.0 4.4E-37 9.5E-42 329.4 20.1 261 512-795 5-276 (277)
213 cd05095 PTKc_DDR2 Catalytic do 100.0 1.7E-36 3.7E-41 328.1 24.9 267 513-795 5-295 (296)
214 cd05608 STKc_GRK1 Catalytic do 100.0 8.5E-37 1.8E-41 327.9 22.3 244 521-788 1-247 (280)
215 PTZ00036 glycogen synthase kin 100.0 1.5E-37 3.2E-42 354.3 17.3 265 109-404 64-351 (440)
216 cd05095 PTKc_DDR2 Catalytic do 100.0 1.1E-36 2.4E-41 329.7 23.3 267 111-406 5-295 (296)
217 cd05068 PTKc_Frk_like Catalyti 100.0 5.6E-37 1.2E-41 325.4 20.6 254 513-796 6-260 (261)
218 cd05033 PTKc_EphR Catalytic do 100.0 5.6E-37 1.2E-41 326.4 20.4 257 110-407 3-264 (266)
219 cd05628 STKc_NDR1 Catalytic do 100.0 5.3E-37 1.1E-41 342.1 21.0 261 513-792 1-292 (363)
220 cd07853 STKc_NLK Catalytic dom 100.0 3.2E-37 7E-42 345.0 19.4 264 112-404 1-288 (372)
221 cd06643 STKc_SLK Catalytic dom 100.0 1.6E-36 3.4E-41 326.0 23.9 252 113-404 7-262 (282)
222 cd05032 PTKc_InsR_like Catalyt 100.0 9.6E-37 2.1E-41 326.4 22.2 260 513-795 6-276 (277)
223 cd05625 STKc_LATS1 Catalytic d 100.0 1.1E-36 2.3E-41 342.1 23.6 216 112-338 2-251 (382)
224 PHA03212 serine/threonine kina 100.0 4.8E-37 1E-41 344.7 20.8 195 109-336 90-284 (391)
225 cd05093 PTKc_TrkB Catalytic do 100.0 4.8E-37 1E-41 331.1 20.0 264 513-800 5-282 (288)
226 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.7E-37 3.6E-42 329.2 16.0 256 109-407 4-260 (261)
227 cd05045 PTKc_RET Catalytic dom 100.0 3.8E-37 8.2E-42 332.2 19.0 263 112-409 1-287 (290)
228 cd05068 PTKc_Frk_like Catalyti 100.0 3.5E-37 7.6E-42 327.0 18.5 256 109-407 4-260 (261)
229 cd05614 STKc_MSK2_N N-terminal 100.0 7.7E-37 1.7E-41 336.6 21.8 252 514-792 1-266 (332)
230 cd05584 STKc_p70S6K Catalytic 100.0 1E-36 2.2E-41 334.3 22.6 242 519-792 2-255 (323)
231 cd05089 PTKc_Tie1 Catalytic do 100.0 4.2E-37 9.2E-42 333.1 19.4 261 111-409 2-276 (297)
232 cd05035 PTKc_Axl_like Catalyti 100.0 9.7E-37 2.1E-41 325.3 21.8 259 516-797 2-272 (273)
233 cd05605 STKc_GRK4_like Catalyt 100.0 8.6E-37 1.9E-41 328.7 21.6 252 514-792 1-260 (285)
234 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.2E-36 2.5E-41 323.6 22.3 262 110-408 1-265 (267)
235 cd05058 PTKc_Met_Ron Catalytic 100.0 1E-36 2.2E-41 323.4 21.9 254 519-797 1-259 (262)
236 cd05620 STKc_nPKC_delta Cataly 100.0 2.7E-37 5.8E-42 337.7 17.8 241 117-402 1-246 (316)
237 cd05032 PTKc_InsR_like Catalyt 100.0 7.3E-37 1.6E-41 327.3 20.8 262 110-406 5-276 (277)
238 cd05051 PTKc_DDR Catalytic dom 100.0 1.5E-36 3.2E-41 328.3 23.3 269 110-406 4-295 (296)
239 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.1E-36 2.5E-41 336.7 22.7 263 513-797 7-339 (343)
240 cd05043 PTK_Ryk Pseudokinase d 100.0 5.7E-37 1.2E-41 328.9 19.7 264 513-799 6-278 (280)
241 KOG0588 Serine/threonine prote 100.0 3.7E-37 8E-42 337.2 18.4 248 112-404 13-263 (786)
242 cd05597 STKc_DMPK_like Catalyt 100.0 4.5E-36 9.8E-41 330.3 27.2 203 111-337 1-210 (331)
243 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 7.4E-37 1.6E-41 326.1 20.3 258 117-406 1-268 (269)
244 cd05091 PTKc_Ror2 Catalytic do 100.0 4.5E-37 9.8E-42 330.2 18.8 261 112-407 6-282 (283)
245 cd05570 STKc_PKC Catalytic dom 100.0 8.9E-37 1.9E-41 334.0 21.3 242 117-403 1-251 (318)
246 PRK13184 pknD serine/threonine 100.0 6.4E-37 1.4E-41 362.4 21.6 279 111-408 2-290 (932)
247 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.2E-36 2.6E-41 327.1 21.8 264 111-407 4-282 (284)
248 cd05623 STKc_MRCK_alpha Cataly 100.0 5.9E-36 1.3E-40 329.5 27.9 203 111-337 1-210 (332)
249 KOG0661 MAPK related serine/th 100.0 4.6E-38 1E-42 333.1 10.6 262 513-792 10-290 (538)
250 cd05624 STKc_MRCK_beta Catalyt 100.0 4.2E-36 9.1E-41 330.5 26.6 203 111-337 1-210 (331)
251 cd05088 PTKc_Tie2 Catalytic do 100.0 6.9E-37 1.5E-41 332.5 20.0 261 110-408 6-280 (303)
252 cd05094 PTKc_TrkC Catalytic do 100.0 5.9E-37 1.3E-41 331.0 19.2 263 514-800 6-285 (291)
253 cd05116 PTKc_Syk Catalytic dom 100.0 6.7E-37 1.5E-41 324.2 19.2 250 118-409 2-256 (257)
254 cd05148 PTKc_Srm_Brk Catalytic 100.0 5.4E-37 1.2E-41 325.3 18.4 257 511-797 4-261 (261)
255 cd05089 PTKc_Tie1 Catalytic do 100.0 9.4E-37 2E-41 330.4 20.6 261 513-799 2-277 (297)
256 cd05050 PTKc_Musk Catalytic do 100.0 9.7E-37 2.1E-41 328.6 20.6 261 512-795 4-287 (288)
257 cd06642 STKc_STK25-YSK1 Cataly 100.0 6E-37 1.3E-41 328.3 18.8 269 515-830 6-275 (277)
258 cd06638 STKc_myosinIIIA Cataly 100.0 6.6E-37 1.4E-41 329.4 19.2 266 101-404 8-283 (286)
259 cd05086 PTKc_Aatyk2 Catalytic 100.0 3.8E-36 8.2E-41 320.6 24.9 255 520-795 2-267 (268)
260 cd05059 PTKc_Tec_like Catalyti 100.0 9.9E-37 2.1E-41 322.7 20.2 250 514-794 5-255 (256)
261 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 8.4E-37 1.8E-41 326.9 19.7 239 520-795 2-274 (274)
262 cd07872 STKc_PCTAIRE2 Catalyti 100.0 5.6E-37 1.2E-41 334.2 18.6 267 111-404 6-286 (309)
263 cd06654 STKc_PAK1 Catalytic do 100.0 1.9E-36 4.2E-41 327.9 22.7 251 111-404 20-270 (296)
264 cd05618 STKc_aPKC_iota Catalyt 100.0 1.4E-36 3E-41 334.0 21.8 242 519-787 1-250 (329)
265 cd05092 PTKc_TrkA Catalytic do 100.0 6E-37 1.3E-41 329.0 18.4 261 111-406 5-279 (280)
266 PTZ00283 serine/threonine prot 100.0 6.3E-37 1.4E-41 353.4 19.9 258 510-792 29-296 (496)
267 KOG0616 cAMP-dependent protein 100.0 7.7E-37 1.7E-41 306.2 17.8 200 513-731 44-246 (355)
268 cd07859 STKc_TDY_MAPK_plant Ca 100.0 5.7E-37 1.2E-41 338.2 18.7 200 515-728 2-210 (338)
269 cd05075 PTKc_Axl Catalytic dom 100.0 1.8E-36 3.9E-41 323.4 21.9 259 113-407 1-270 (272)
270 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.3E-36 2.8E-41 327.0 20.9 257 111-405 5-267 (284)
271 cd05594 STKc_PKB_alpha Catalyt 100.0 6.8E-37 1.5E-41 336.0 18.9 242 520-792 2-251 (325)
272 cd05066 PTKc_EphR_A Catalytic 100.0 1.2E-36 2.7E-41 324.0 20.4 257 513-796 4-265 (267)
273 cd07862 STKc_CDK6 Catalytic do 100.0 1.5E-36 3.2E-41 327.5 21.1 262 514-792 2-286 (290)
274 KOG1094 Discoidin domain recep 100.0 2.1E-37 4.5E-42 333.3 14.2 262 111-407 538-803 (807)
275 cd05042 PTKc_Aatyk Catalytic d 100.0 8.5E-37 1.9E-41 325.5 18.9 257 118-406 2-268 (269)
276 cd05061 PTKc_InsR Catalytic do 100.0 1.7E-36 3.6E-41 326.9 21.3 266 108-408 3-278 (288)
277 cd05115 PTKc_Zap-70 Catalytic 100.0 2.2E-36 4.7E-41 320.5 21.8 250 118-408 2-255 (257)
278 cd05602 STKc_SGK1 Catalytic do 100.0 1.2E-36 2.5E-41 334.1 20.3 245 117-406 1-249 (325)
279 cd05055 PTKc_PDGFR Catalytic d 100.0 2E-36 4.4E-41 328.6 21.9 258 513-796 35-300 (302)
280 cd08229 STKc_Nek7 Catalytic do 100.0 2.2E-36 4.8E-41 321.7 21.8 260 514-797 3-265 (267)
281 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.4E-36 3.1E-41 322.9 20.2 240 519-795 1-262 (262)
282 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.5E-36 3.3E-41 335.7 21.3 265 111-409 7-340 (343)
283 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.3E-36 2.7E-41 326.9 20.0 268 113-407 6-280 (283)
284 cd05582 STKc_RSK_N N-terminal 100.0 6.2E-37 1.3E-41 335.2 17.8 244 519-794 2-252 (318)
285 cd05632 STKc_GRK5 Catalytic do 100.0 1.4E-36 3E-41 327.1 20.3 247 113-399 2-251 (285)
286 cd05109 PTKc_HER2 Catalytic do 100.0 1.2E-36 2.5E-41 326.5 19.5 257 513-798 7-269 (279)
287 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 7.7E-37 1.7E-41 328.8 18.1 262 514-797 5-283 (284)
288 cd05055 PTKc_PDGFR Catalytic d 100.0 1.7E-36 3.8E-41 329.2 21.1 259 110-407 34-300 (302)
289 cd05047 PTKc_Tie Catalytic dom 100.0 2.7E-36 5.8E-41 322.1 22.0 252 520-797 2-268 (270)
290 cd06644 STKc_STK10_LOK Catalyt 100.0 5.1E-36 1.1E-40 323.7 24.5 252 111-403 12-268 (292)
291 cd05591 STKc_nPKC_epsilon Cata 100.0 1.2E-36 2.6E-41 333.5 19.6 242 519-792 1-253 (321)
292 cd05060 PTKc_Syk_like Catalyti 100.0 2.8E-36 6.1E-41 319.3 21.8 251 519-798 1-256 (257)
293 PTZ00267 NIMA-related protein 100.0 2.4E-36 5.2E-41 348.2 23.1 252 515-792 69-322 (478)
294 cd05599 STKc_NDR_like Catalyti 100.0 8.5E-37 1.8E-41 340.7 18.7 209 513-730 1-243 (364)
295 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 4.3E-36 9.4E-41 319.2 23.3 262 513-798 2-266 (267)
296 cd06624 STKc_ASK Catalytic dom 100.0 3.1E-36 6.6E-41 321.1 22.1 259 507-792 2-264 (268)
297 cd05615 STKc_cPKC_alpha Cataly 100.0 1.4E-36 3E-41 333.2 19.9 243 112-399 1-247 (323)
298 PHA03212 serine/threonine kina 100.0 1.8E-36 4E-41 340.1 21.3 192 513-727 92-284 (391)
299 cd06645 STKc_MAP4K3 Catalytic 100.0 1.1E-36 2.3E-41 324.4 18.4 254 111-404 9-265 (267)
300 cd06615 PKc_MEK Catalytic doma 100.0 3E-36 6.6E-41 328.2 22.4 199 513-728 1-200 (308)
301 cd05101 PTKc_FGFR2 Catalytic d 100.0 2.6E-36 5.6E-41 328.1 21.8 262 513-797 15-296 (304)
302 cd05050 PTKc_Musk Catalytic do 100.0 1.5E-36 3.2E-41 327.2 19.7 263 109-406 3-287 (288)
303 cd05059 PTKc_Tec_like Catalyti 100.0 9.5E-37 2.1E-41 322.8 17.8 250 112-405 5-255 (256)
304 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 3.5E-36 7.7E-41 323.6 22.5 264 111-408 4-283 (284)
305 cd06619 PKc_MKK5 Catalytic dom 100.0 4.7E-36 1E-40 321.8 23.4 249 514-793 2-253 (279)
306 cd05630 STKc_GRK6 Catalytic do 100.0 2.2E-36 4.9E-41 325.5 20.9 251 113-403 2-260 (285)
307 cd06639 STKc_myosinIIIB Cataly 100.0 1.4E-36 3.1E-41 327.8 19.4 267 100-404 11-287 (291)
308 cd05061 PTKc_InsR Catalytic do 100.0 1.9E-36 4E-41 326.5 20.3 263 511-796 4-277 (288)
309 cd05592 STKc_nPKC_theta_delta 100.0 2.3E-36 4.9E-41 330.4 21.2 239 520-790 2-244 (316)
310 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.5E-36 3.2E-41 321.5 19.1 250 112-405 5-255 (256)
311 cd06640 STKc_MST4 Catalytic do 100.0 2.9E-36 6.3E-41 323.0 21.5 248 514-793 5-253 (277)
312 cd05627 STKc_NDR2 Catalytic do 100.0 2.5E-36 5.5E-41 336.3 21.8 217 111-338 1-239 (360)
313 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 4E-36 8.7E-41 323.0 22.6 260 513-797 4-283 (284)
314 cd05047 PTKc_Tie Catalytic dom 100.0 2E-36 4.4E-41 323.0 20.2 254 117-408 1-268 (270)
315 cd05109 PTKc_HER2 Catalytic do 100.0 2.6E-36 5.6E-41 323.7 21.0 257 110-408 6-268 (279)
316 cd05065 PTKc_EphR_B Catalytic 100.0 2E-36 4.2E-41 322.8 19.9 257 515-796 6-267 (269)
317 KOG0199 ACK and related non-re 100.0 5.2E-37 1.1E-41 335.6 15.6 247 519-792 116-367 (1039)
318 cd05573 STKc_ROCK_NDR_like Cat 100.0 7.1E-37 1.5E-41 339.3 17.1 257 514-792 2-284 (350)
319 PTZ00266 NIMA-related protein 100.0 1.6E-36 3.5E-41 360.2 21.0 259 108-403 10-294 (1021)
320 PRK13184 pknD serine/threonine 100.0 3.2E-36 6.8E-41 356.5 23.5 268 513-796 2-289 (932)
321 cd05588 STKc_aPKC Catalytic do 100.0 2.7E-36 5.9E-41 331.7 21.3 241 520-787 2-250 (329)
322 cd06611 STKc_SLK_like Catalyti 100.0 3.7E-36 8.1E-41 322.6 21.8 255 110-404 4-262 (280)
323 cd05586 STKc_Sck1_like Catalyt 100.0 9.6E-37 2.1E-41 335.5 17.7 242 119-403 1-248 (330)
324 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 4.7E-36 1E-40 318.2 22.3 252 514-796 7-259 (260)
325 KOG0589 Serine/threonine prote 100.0 4.4E-37 9.5E-42 332.7 14.5 252 513-793 4-258 (426)
326 cd05625 STKc_LATS1 Catalytic d 100.0 1.7E-36 3.7E-41 340.4 20.0 209 514-731 2-253 (382)
327 cd05607 STKc_GRK7 Catalytic do 100.0 6E-36 1.3E-40 320.8 23.3 248 521-794 1-251 (277)
328 KOG0660 Mitogen-activated prot 100.0 6.9E-37 1.5E-41 316.3 15.2 267 109-404 20-310 (359)
329 cd06656 STKc_PAK3 Catalytic do 100.0 2.6E-36 5.7E-41 327.0 20.6 251 111-404 19-269 (297)
330 cd05098 PTKc_FGFR1 Catalytic d 100.0 2.2E-36 4.8E-41 329.1 20.1 263 513-798 18-300 (307)
331 KOG0599 Phosphorylase kinase g 100.0 1.8E-37 4E-42 306.2 10.4 253 111-404 17-283 (411)
332 cd05596 STKc_ROCK Catalytic do 100.0 1.2E-36 2.5E-41 339.9 18.2 253 512-792 42-303 (370)
333 cd05619 STKc_nPKC_theta Cataly 100.0 2.4E-36 5.2E-41 330.2 20.3 241 519-791 1-246 (316)
334 cd05590 STKc_nPKC_eta Catalyti 100.0 2.6E-36 5.6E-41 330.6 20.6 238 519-788 1-242 (320)
335 cd05589 STKc_PKN Catalytic dom 100.0 1.6E-36 3.6E-41 332.8 19.1 240 516-788 2-247 (324)
336 KOG0590 Checkpoint kinase and 100.0 4.3E-38 9.2E-43 364.7 6.7 545 112-792 21-584 (601)
337 cd05088 PTKc_Tie2 Catalytic do 100.0 3.4E-36 7.3E-41 327.1 21.2 258 513-796 7-279 (303)
338 KOG0584 Serine/threonine prote 100.0 2.2E-37 4.9E-42 338.9 11.9 243 519-792 46-295 (632)
339 cd05071 PTKc_Src Catalytic dom 100.0 4.6E-36 1E-40 318.8 21.7 253 513-796 6-259 (262)
340 PHA03209 serine/threonine kina 100.0 2.9E-36 6.2E-41 335.3 20.9 194 108-335 63-256 (357)
341 cd05040 PTKc_Ack_like Catalyti 100.0 5.6E-36 1.2E-40 316.8 22.1 251 519-795 1-256 (257)
342 cd06637 STKc_TNIK Catalytic do 100.0 3.3E-36 7.1E-41 321.3 20.5 253 510-792 3-268 (272)
343 PHA03211 serine/threonine kina 100.0 2.4E-36 5.1E-41 343.6 20.5 194 111-335 169-362 (461)
344 cd05101 PTKc_FGFR2 Catalytic d 100.0 4.6E-36 1E-40 326.1 22.0 266 109-409 13-297 (304)
345 PTZ00284 protein kinase; Provi 100.0 1.8E-36 3.9E-41 348.9 19.8 272 102-404 120-438 (467)
346 cd06625 STKc_MEKK3_like Cataly 100.0 7.5E-36 1.6E-40 316.8 23.0 254 111-404 2-260 (263)
347 cd08529 STKc_FA2-like Catalyti 100.0 5.3E-36 1.2E-40 316.4 21.6 250 514-792 1-252 (256)
348 cd05621 STKc_ROCK2 Catalytic d 100.0 2.4E-36 5.1E-41 337.1 19.9 205 510-730 40-251 (370)
349 cd06612 STKc_MST1_2 Catalytic 100.0 3.6E-36 7.7E-41 317.8 20.3 250 111-403 3-252 (256)
350 cd05629 STKc_NDR_like_fungal C 100.0 1.9E-36 4E-41 339.5 19.1 209 514-731 2-253 (377)
351 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 3.4E-36 7.5E-41 323.7 20.3 254 514-794 6-267 (284)
352 cd05060 PTKc_Syk_like Catalyti 100.0 7.5E-36 1.6E-40 316.0 22.6 250 117-408 1-255 (257)
353 cd05587 STKc_cPKC Catalytic do 100.0 3.4E-36 7.3E-41 330.3 20.6 242 514-787 1-246 (324)
354 cd05085 PTKc_Fer Catalytic dom 100.0 7.9E-36 1.7E-40 314.2 22.5 247 117-406 1-249 (250)
355 cd06655 STKc_PAK2 Catalytic do 100.0 1.9E-36 4.2E-41 327.8 18.3 251 111-404 19-269 (296)
356 KOG0588 Serine/threonine prote 100.0 1.4E-36 3E-41 332.6 17.1 242 518-792 17-262 (786)
357 cd05065 PTKc_EphR_B Catalytic 100.0 5.7E-36 1.2E-40 319.2 21.5 256 112-407 5-267 (269)
358 cd05098 PTKc_FGFR1 Catalytic d 100.0 3.8E-36 8.2E-41 327.3 20.6 264 110-408 17-299 (307)
359 KOG0574 STE20-like serine/thre 100.0 6.1E-38 1.3E-42 312.8 5.8 247 113-404 35-283 (502)
360 cd05601 STKc_CRIK Catalytic do 100.0 8.4E-37 1.8E-41 336.0 15.5 253 513-792 1-262 (330)
361 cd05616 STKc_cPKC_beta Catalyt 100.0 3E-36 6.5E-41 330.6 19.7 242 514-787 1-246 (323)
362 PHA03211 serine/threonine kina 100.0 4.1E-36 8.9E-41 341.6 21.4 194 512-726 168-362 (461)
363 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2.6E-36 5.7E-41 319.4 18.5 239 117-405 1-258 (259)
364 cd05066 PTKc_EphR_A Catalytic 100.0 3.5E-36 7.5E-41 320.6 19.5 257 111-407 4-265 (267)
365 cd05632 STKc_GRK5 Catalytic do 100.0 8.2E-36 1.8E-40 321.1 22.6 247 515-788 2-251 (285)
366 cd05099 PTKc_FGFR4 Catalytic d 100.0 4.5E-36 9.8E-41 327.8 20.9 264 513-799 12-295 (314)
367 KOG0577 Serine/threonine prote 100.0 2.8E-37 6.1E-42 331.8 11.0 245 113-403 28-277 (948)
368 cd05044 PTKc_c-ros Catalytic d 100.0 3.3E-36 7.1E-41 320.8 19.2 254 519-795 1-268 (269)
369 cd05575 STKc_SGK Catalytic dom 100.0 2.4E-36 5.2E-41 331.4 18.6 239 519-789 1-243 (323)
370 cd07868 STKc_CDK8 Catalytic do 100.0 6.6E-36 1.4E-40 326.8 22.0 204 116-338 6-219 (317)
371 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 4.6E-36 9.9E-41 322.9 20.4 256 111-404 1-262 (286)
372 cd08219 STKc_Nek3 Catalytic do 100.0 7.1E-36 1.5E-40 315.7 21.4 251 112-404 1-252 (255)
373 cd05071 PTKc_Src Catalytic dom 100.0 2.5E-36 5.5E-41 320.9 18.1 256 110-409 5-261 (262)
374 cd05570 STKc_PKC Catalytic dom 100.0 3E-36 6.4E-41 329.8 19.1 242 519-792 1-251 (318)
375 cd05069 PTKc_Yes Catalytic dom 100.0 6.3E-36 1.4E-40 317.3 21.0 252 514-796 7-259 (260)
376 cd06642 STKc_STK25-YSK1 Cataly 100.0 2E-36 4.4E-41 324.2 17.3 247 113-404 6-253 (277)
377 cd07863 STKc_CDK4 Catalytic do 100.0 5E-36 1.1E-40 322.9 20.4 262 112-403 1-284 (288)
378 cd06646 STKc_MAP4K5 Catalytic 100.0 3.4E-36 7.3E-41 320.4 18.9 254 513-794 9-266 (267)
379 cd07876 STKc_JNK2 Catalytic do 100.0 3.4E-36 7.3E-41 335.2 19.7 198 110-338 20-225 (359)
380 cd05099 PTKc_FGFR4 Catalytic d 100.0 7.5E-36 1.6E-40 326.1 22.0 263 111-408 12-293 (314)
381 cd08227 PK_STRAD_alpha Pseudok 100.0 5.1E-36 1.1E-40 329.3 20.8 206 115-337 2-212 (327)
382 cd05620 STKc_nPKC_delta Cataly 100.0 3.6E-36 7.8E-41 328.8 19.4 241 519-791 1-246 (316)
383 KOG0605 NDR and related serine 100.0 4.6E-36 1E-40 323.2 19.7 257 512-791 140-443 (550)
384 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2.6E-36 5.7E-41 327.5 18.1 265 111-404 6-286 (301)
385 cd07847 STKc_CDKL1_4 Catalytic 100.0 7.8E-36 1.7E-40 320.7 21.7 264 111-403 1-282 (286)
386 cd05100 PTKc_FGFR3 Catalytic d 100.0 7.7E-36 1.7E-40 328.9 22.1 264 111-409 12-294 (334)
387 cd07861 STKc_CDK1_euk Catalyti 100.0 7E-36 1.5E-40 321.1 21.2 264 112-403 1-281 (285)
388 cd05598 STKc_LATS Catalytic do 100.0 1.8E-36 3.8E-41 339.6 17.1 209 514-731 2-249 (376)
389 cd05039 PTKc_Csk_like Catalyti 100.0 1.2E-35 2.6E-40 314.1 22.6 250 110-407 5-255 (256)
390 cd05067 PTKc_Lck_Blk Catalytic 100.0 8E-36 1.7E-40 316.4 21.2 253 513-796 6-259 (260)
391 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.3E-36 2.8E-41 327.0 15.1 267 111-403 1-282 (286)
392 cd06613 STKc_MAP4K3_like Catal 100.0 9.9E-36 2.1E-40 315.5 21.7 256 110-403 2-259 (262)
393 cd06609 STKc_MST3_like Catalyt 100.0 1.3E-35 2.7E-40 317.4 22.7 250 111-404 1-251 (274)
394 cd05110 PTKc_HER4 Catalytic do 100.0 3.5E-36 7.6E-41 326.9 18.6 256 513-797 7-268 (303)
395 cd05092 PTKc_TrkA Catalytic do 100.0 7.7E-36 1.7E-40 320.4 21.0 258 514-795 6-279 (280)
396 cd05617 STKc_aPKC_zeta Catalyt 100.0 9E-36 1.9E-40 327.3 21.8 243 519-788 1-249 (327)
397 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 5.2E-36 1.1E-40 317.8 19.3 253 111-407 6-259 (260)
398 cd05058 PTKc_Met_Ron Catalytic 100.0 8.4E-36 1.8E-40 316.3 20.9 254 117-409 1-260 (262)
399 PTZ00036 glycogen synthase kin 100.0 3.3E-36 7.1E-41 343.3 18.9 262 512-792 65-350 (440)
400 cd07867 STKc_CDC2L6 Catalytic 100.0 6.3E-36 1.4E-40 326.8 20.4 204 116-338 6-219 (317)
401 cd05040 PTKc_Ack_like Catalyti 100.0 5.2E-36 1.1E-40 317.0 19.1 251 117-406 1-256 (257)
402 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 3.5E-36 7.7E-41 322.9 18.0 262 514-797 5-283 (284)
403 cd05082 PTKc_Csk Catalytic dom 100.0 1.1E-35 2.5E-40 314.4 21.7 248 111-407 6-255 (256)
404 cd05604 STKc_SGK3 Catalytic do 100.0 3.4E-36 7.3E-41 330.5 18.2 244 519-794 1-248 (325)
405 cd07878 STKc_p38beta_MAPK11 Ca 100.0 3.4E-36 7.5E-41 332.9 18.4 262 109-404 13-298 (343)
406 cd06654 STKc_PAK1 Catalytic do 100.0 8.6E-36 1.9E-40 322.8 21.0 249 513-792 20-269 (296)
407 cd05043 PTK_Ryk Pseudokinase d 100.0 9E-36 1.9E-40 319.6 20.9 265 109-408 4-276 (280)
408 cd05044 PTKc_c-ros Catalytic d 100.0 3.5E-36 7.7E-41 320.5 17.7 255 117-406 1-268 (269)
409 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.2E-35 2.6E-40 318.8 21.8 263 112-408 5-283 (284)
410 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 2.6E-36 5.6E-41 320.0 16.4 239 520-795 2-258 (258)
411 cd07841 STKc_CDK7 Catalytic do 100.0 7.7E-36 1.7E-40 323.2 20.4 264 112-404 1-282 (298)
412 KOG0585 Ca2+/calmodulin-depend 100.0 3.9E-36 8.5E-41 317.8 17.4 258 512-794 96-373 (576)
413 cd06651 STKc_MEKK3 Catalytic d 100.0 1.4E-35 2.9E-40 315.8 21.8 252 111-403 2-260 (266)
414 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 7.3E-36 1.6E-40 316.0 19.6 238 519-795 1-259 (259)
415 cd07874 STKc_JNK3 Catalytic do 100.0 5E-36 1.1E-40 333.2 19.1 265 109-404 15-311 (355)
416 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.2E-35 2.6E-40 319.1 21.3 261 102-403 7-278 (282)
417 cd05082 PTKc_Csk Catalytic dom 100.0 1.4E-35 3E-40 313.8 21.5 247 514-796 7-255 (256)
418 PF00069 Pkinase: Protein kina 100.0 2.8E-36 6.1E-41 319.1 16.2 254 113-403 1-256 (260)
419 cd05110 PTKc_HER4 Catalytic do 100.0 1E-35 2.2E-40 323.3 20.9 257 110-408 6-268 (303)
420 cd05630 STKc_GRK6 Catalytic do 100.0 1.8E-35 3.8E-40 318.6 22.5 251 515-792 2-260 (285)
421 cd00192 PTKc Catalytic domain 100.0 2.6E-35 5.7E-40 311.5 23.5 254 519-795 1-262 (262)
422 cd05041 PTKc_Fes_like Catalyti 100.0 1.4E-35 3.1E-40 312.5 21.4 250 519-796 1-251 (251)
423 cd06640 STKc_MST4 Catalytic do 100.0 1.6E-35 3.5E-40 317.3 22.1 248 112-404 5-253 (277)
424 cd06625 STKc_MEKK3_like Cataly 100.0 1.9E-35 4.1E-40 313.7 22.3 254 513-793 2-260 (263)
425 KOG4257 Focal adhesion tyrosin 100.0 2.8E-36 6E-41 326.1 15.9 251 517-797 393-649 (974)
426 cd05100 PTKc_FGFR3 Catalytic d 100.0 8.6E-36 1.9E-40 328.5 20.3 262 514-798 13-294 (334)
427 cd05622 STKc_ROCK1 Catalytic d 100.0 6.2E-36 1.3E-40 334.0 19.3 210 505-730 35-251 (371)
428 KOG0610 Putative serine/threon 100.0 4.1E-36 8.9E-41 313.8 16.5 265 109-398 75-382 (459)
429 cd07853 STKc_NLK Catalytic dom 100.0 1.5E-35 3.2E-40 331.6 22.3 258 514-792 1-287 (372)
430 cd07870 STKc_PFTAIRE2 Catalyti 100.0 8.7E-36 1.9E-40 321.7 19.8 269 109-403 3-287 (291)
431 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2.4E-35 5.1E-40 313.4 22.7 262 111-403 1-263 (267)
432 cd05602 STKc_SGK1 Catalytic do 100.0 6.9E-36 1.5E-40 328.0 19.2 241 520-792 2-246 (325)
433 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 2E-35 4.3E-40 317.9 22.4 253 514-792 2-261 (286)
434 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.5E-35 3.4E-40 318.1 21.4 255 111-403 1-260 (283)
435 cd06659 STKc_PAK6 Catalytic do 100.0 1E-35 2.2E-40 322.3 20.2 248 114-404 24-271 (297)
436 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.1E-35 2.5E-40 316.9 20.2 256 118-406 2-267 (268)
437 cd08227 PK_STRAD_alpha Pseudok 100.0 1.4E-35 3.1E-40 325.7 21.6 203 519-728 4-212 (327)
438 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.8E-35 4E-40 314.7 21.7 253 113-403 2-263 (267)
439 cd05039 PTKc_Csk_like Catalyti 100.0 1.2E-35 2.6E-40 314.1 20.2 249 513-796 6-255 (256)
440 KOG0659 Cdk activating kinase 100.0 6.6E-36 1.4E-40 295.4 16.7 262 514-793 3-281 (318)
441 KOG0576 Mitogen-activated prot 100.0 5.1E-37 1.1E-41 335.4 9.7 410 111-726 15-430 (829)
442 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.6E-35 3.4E-40 322.7 21.5 260 513-792 6-285 (309)
443 KOG0694 Serine/threonine prote 100.0 5.6E-36 1.2E-40 331.0 17.9 242 513-787 368-613 (694)
444 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.5E-35 3.3E-40 314.3 20.7 254 110-407 5-259 (260)
445 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2.3E-35 5.1E-40 317.8 22.4 261 111-404 1-266 (287)
446 KOG0579 Ste20-like serine/thre 100.0 5.1E-37 1.1E-41 331.3 9.3 251 113-404 34-289 (1187)
447 cd05057 PTKc_EGFR_like Catalyt 100.0 1.2E-35 2.7E-40 318.5 20.0 257 513-798 7-269 (279)
448 cd05056 PTKc_FAK Catalytic dom 100.0 1.2E-35 2.6E-40 316.9 19.8 255 514-798 7-266 (270)
449 cd06917 STKc_NAK1_like Catalyt 100.0 1.5E-35 3.2E-40 317.3 20.5 250 112-404 2-255 (277)
450 PHA03209 serine/threonine kina 100.0 4.2E-35 9E-40 325.9 24.7 192 511-726 64-256 (357)
451 cd06651 STKc_MEKK3 Catalytic d 100.0 2.2E-35 4.8E-40 314.2 21.6 252 513-792 2-260 (266)
452 cd07875 STKc_JNK1 Catalytic do 100.0 1.2E-35 2.6E-40 331.4 20.2 198 110-338 23-228 (364)
453 cd06632 STKc_MEKK1_plant Catal 100.0 3.4E-35 7.4E-40 310.5 22.5 249 112-403 1-254 (258)
454 cd06630 STKc_MEKK1 Catalytic d 100.0 2.2E-35 4.8E-40 314.1 21.2 256 112-403 1-263 (268)
455 cd06629 STKc_MAPKKK_Bck1_like 100.0 2.7E-35 6E-40 314.3 21.7 257 112-404 2-269 (272)
456 cd05057 PTKc_EGFR_like Catalyt 100.0 2.5E-35 5.5E-40 316.1 21.5 256 111-408 7-268 (279)
457 cd08223 STKc_Nek4 Catalytic do 100.0 3.6E-35 7.8E-40 310.4 22.3 251 112-404 1-254 (257)
458 cd08219 STKc_Nek3 Catalytic do 100.0 1.5E-35 3.2E-40 313.2 19.4 250 515-793 2-252 (255)
459 PTZ00284 protein kinase; Provi 100.0 5E-35 1.1E-39 337.0 25.3 203 507-730 123-349 (467)
460 KOG4279 Serine/threonine prote 100.0 1.6E-36 3.5E-41 330.6 12.1 246 520-792 582-831 (1226)
461 cd06631 STKc_YSK4 Catalytic do 100.0 7.4E-35 1.6E-39 309.8 24.6 255 112-403 1-261 (265)
462 cd05112 PTKc_Itk Catalytic dom 100.0 2E-35 4.3E-40 312.3 20.1 251 111-405 4-255 (256)
463 cd06631 STKc_YSK4 Catalytic do 100.0 3.3E-35 7.1E-40 312.5 21.8 255 515-792 2-261 (265)
464 cd08218 STKc_Nek1 Catalytic do 100.0 4.4E-35 9.6E-40 309.7 22.7 251 112-404 1-253 (256)
465 cd05627 STKc_NDR2 Catalytic do 100.0 8.1E-36 1.8E-40 332.2 17.8 210 513-731 1-241 (360)
466 PHA03207 serine/threonine kina 100.0 2.1E-35 4.5E-40 332.5 21.3 263 110-404 91-375 (392)
467 cd06612 STKc_MST1_2 Catalytic 100.0 2.6E-35 5.5E-40 311.2 20.7 249 513-792 3-252 (256)
468 cd05603 STKc_SGK2 Catalytic do 100.0 1.4E-35 3.1E-40 324.9 19.5 238 519-788 1-242 (321)
469 cd06608 STKc_myosinIII_like Ca 100.0 1.4E-35 3.1E-40 316.3 18.9 258 108-403 3-271 (275)
470 cd05069 PTKc_Yes Catalytic dom 100.0 2.5E-35 5.4E-40 312.7 20.6 253 111-407 6-259 (260)
471 cd00192 PTKc Catalytic domain 100.0 4.6E-35 9.9E-40 309.6 22.5 255 117-406 1-262 (262)
472 cd07844 STKc_PCTAIRE_like Cata 100.0 1.6E-35 3.4E-40 319.6 19.3 265 111-403 5-287 (291)
473 cd06623 PKc_MAPKK_plant_like C 100.0 5.6E-35 1.2E-39 309.9 23.2 254 111-404 1-256 (264)
474 cd08221 STKc_Nek9 Catalytic do 100.0 4.4E-35 9.6E-40 309.7 22.3 251 112-404 1-253 (256)
475 cd07874 STKc_JNK3 Catalytic do 100.0 1.1E-35 2.3E-40 330.6 18.4 199 511-729 15-221 (355)
476 cd05034 PTKc_Src_like Catalyti 100.0 2.5E-35 5.3E-40 312.6 20.4 254 513-796 6-260 (261)
477 cd08528 STKc_Nek10 Catalytic d 100.0 3.4E-35 7.3E-40 313.1 21.4 256 112-406 1-268 (269)
478 cd05112 PTKc_Itk Catalytic dom 100.0 2E-35 4.4E-40 312.3 19.6 251 514-795 5-256 (256)
479 cd05609 STKc_MAST Catalytic do 100.0 5.6E-35 1.2E-39 317.8 23.5 270 111-407 1-273 (305)
480 cd05073 PTKc_Hck Catalytic dom 100.0 3E-35 6.4E-40 312.1 20.8 253 513-796 6-259 (260)
481 PHA03207 serine/threonine kina 100.0 7.5E-35 1.6E-39 328.0 25.3 196 513-729 92-290 (392)
482 cd05615 STKc_cPKC_alpha Cataly 100.0 1.2E-35 2.6E-40 325.7 18.2 243 514-788 1-247 (323)
483 PTZ00266 NIMA-related protein 100.0 2.1E-35 4.6E-40 350.7 21.6 256 512-792 12-294 (1021)
484 cd07833 STKc_CDKL Catalytic do 100.0 1.1E-35 2.4E-40 319.9 17.5 265 111-403 1-284 (288)
485 cd07860 STKc_CDK2_3 Catalytic 100.0 2.2E-35 4.7E-40 317.2 19.8 263 112-403 1-280 (284)
486 KOG4257 Focal adhesion tyrosin 100.0 1.3E-35 2.9E-40 320.8 18.0 254 113-409 391-650 (974)
487 cd06639 STKc_myosinIIIB Cataly 100.0 2E-35 4.3E-40 318.9 19.5 263 503-792 12-286 (291)
488 cd05034 PTKc_Src_like Catalyti 100.0 2.1E-35 4.6E-40 313.1 19.4 256 109-407 4-260 (261)
489 cd07839 STKc_CDK5 Catalytic do 100.0 1.1E-35 2.4E-40 319.4 17.5 264 112-403 1-280 (284)
490 cd07876 STKc_JNK2 Catalytic do 100.0 2.8E-35 6.1E-40 327.7 21.2 198 512-729 20-225 (359)
491 cd06609 STKc_MST3_like Catalyt 100.0 5.1E-35 1.1E-39 312.7 22.3 247 514-792 2-250 (274)
492 cd06655 STKc_PAK2 Catalytic do 100.0 2.7E-35 5.9E-40 318.9 20.4 249 513-792 19-268 (296)
493 cd05074 PTKc_Tyro3 Catalytic d 100.0 3.1E-35 6.6E-40 314.0 20.4 259 516-797 2-272 (273)
494 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 6.8E-35 1.5E-39 314.2 23.2 261 513-792 1-265 (287)
495 cd06658 STKc_PAK5 Catalytic do 100.0 2.4E-35 5.1E-40 318.7 19.6 249 113-404 24-272 (292)
496 cd06652 STKc_MEKK2 Catalytic d 100.0 3.6E-35 7.7E-40 312.3 20.6 253 111-404 2-261 (265)
497 cd08217 STKc_Nek2 Catalytic do 100.0 3.1E-35 6.8E-40 311.7 20.1 256 112-404 1-262 (265)
498 cd05046 PTK_CCK4 Pseudokinase 100.0 5.6E-35 1.2E-39 312.5 22.2 260 513-795 5-274 (275)
499 cd06607 STKc_TAO Catalytic dom 100.0 3.9E-35 8.5E-40 319.3 21.3 248 111-404 15-267 (307)
500 cd05597 STKc_DMPK_like Catalyt 100.0 4.9E-35 1.1E-39 322.0 22.3 257 514-793 2-266 (331)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-61 Score=528.17 Aligned_cols=288 Identities=45% Similarity=0.778 Sum_probs=255.6
Q ss_pred CCccccHHHHHhhcCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeee
Q 003278 97 NPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGW 176 (834)
Q Consensus 97 ~~~~f~~~el~~~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~ 176 (834)
..+.|+|.||..||++|+..++||+||||.||+|.+ .+|+.||||++........++|.+|+.+|++++|||||+|+||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l-~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGy 139 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVL-SDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGY 139 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEE-CCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEE
Confidence 567899999999999999999999999999999999 5679999998876543214569999999999999999999999
Q ss_pred EEeCC-EEEEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCC
Q 003278 177 CVHED-QLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQY 255 (834)
Q Consensus 177 ~~~~~-~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~ 255 (834)
|.+.+ +.+||||||+||+|+++|+.... . +|+|.+|++||.++|+||+|||+.+.++||||||||+|||||+++
T Consensus 140 C~e~~~~~~LVYEym~nGsL~d~L~~~~~----~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~ 214 (361)
T KOG1187|consen 140 CLEGGEHRLLVYEYMPNGSLEDHLHGKKG----E-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDF 214 (361)
T ss_pred EecCCceEEEEEEccCCCCHHHHhCCCCC----C-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCC
Confidence 99999 59999999999999999987542 1 799999999999999999999999989999999999999999999
Q ss_pred ceEEeeccchhhhhh-hhhhhhhcccccccccccccceee-eccccCCCccccccCCCCCcccceeehhhHHHHHHhCCc
Q 003278 256 NARLGDFGLARWLEH-ELQYQMRTSSARNHQFHLAETTRI-GGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRR 333 (834)
Q Consensus 256 ~~kl~DFGla~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~ 333 (834)
++||+|||+|+.... .. ...+. .||.+|+||||+..+ ..|.|+|||||||+|+||+||++
T Consensus 215 ~aKlsDFGLa~~~~~~~~-----------------~~~~~~~gt~gY~~PEy~~~g-~lt~KsDVySFGVvllElitgr~ 276 (361)
T KOG1187|consen 215 NAKLSDFGLAKLGPEGDT-----------------SVSTTVMGTFGYLAPEYASTG-KLTEKSDVYSFGVVLLELITGRK 276 (361)
T ss_pred CEEccCccCcccCCcccc-----------------ceeeecCCCCccCChhhhccC-CcCcccccccchHHHHHHHhCCc
Confidence 999999999976432 10 01111 799999999999876 67999999999999999999999
Q ss_pred cCCCCCCCccchHHHHHHHHhhcCccccccccccCCCCCCH-HHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcC
Q 003278 334 AVDLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKL-CDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGS 408 (834)
Q Consensus 334 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~-~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~ 408 (834)
|.+...+.....++.|+++...++++.+++|+++..+.+.. +++.++..+|+.|++.+|..||+|.+|+++|...
T Consensus 277 ~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~ 352 (361)
T KOG1187|consen 277 AVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGI 352 (361)
T ss_pred ccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhh
Confidence 99977666667799999999999999999999997556664 7889999999999999999999999999999543
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-60 Score=517.33 Aligned_cols=287 Identities=40% Similarity=0.667 Sum_probs=247.6
Q ss_pred CCccccHHHHHHHhhCcCcCCcccccCCcEEEEEEECCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEE
Q 003278 499 TPREISFKEIISATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGW 578 (834)
Q Consensus 499 ~~~~~~~~el~~at~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~ 578 (834)
..+.|++.||.+||++|+..++||+||||.||+|.++++..||||++....... ..+|.+|+.+|++++|||||+|+||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~-~~eF~~Ei~~ls~l~H~Nlv~LlGy 139 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG-EREFLNEVEILSRLRHPNLVKLLGY 139 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc-hhHHHHHHHHHhcCCCcCcccEEEE
Confidence 457799999999999999999999999999999999999999999887655432 4569999999999999999999999
Q ss_pred EeeCC-eEEEEEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCC
Q 003278 579 CTEQG-EMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMN 657 (834)
Q Consensus 579 ~~~~~-~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~ 657 (834)
|.+.+ +.+||||||++|+|.++|+..... +|+|.+|++||.++|+||+|||+.+.++||||||||+|||||++++
T Consensus 140 C~e~~~~~~LVYEym~nGsL~d~L~~~~~~----~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~ 215 (361)
T KOG1187|consen 140 CLEGGEHRLLVYEYMPNGSLEDHLHGKKGE----PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFN 215 (361)
T ss_pred EecCCceEEEEEEccCCCCHHHHhCCCCCC----CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCC
Confidence 99998 599999999999999999875431 6899999999999999999999988889999999999999999999
Q ss_pred ceEeeeeecccccc-CCCCCcccccCcccc-ccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCch--
Q 003278 658 PRLGSFALAEFLTR-NDHGHRKATSGNRSV-RGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEG-- 733 (834)
Q Consensus 658 ~ki~DfGla~~~~~-~~~~~~~~~~~~~~~-~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~-- 733 (834)
+||+|||+|+..+. ... ..+. .||.+|+||||+..+..|.|+|||||||+|+||+||+.|.+...+.+
T Consensus 216 aKlsDFGLa~~~~~~~~~--------~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~ 287 (361)
T KOG1187|consen 216 AKLSDFGLAKLGPEGDTS--------VSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGEL 287 (361)
T ss_pred EEccCccCcccCCccccc--------eeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccc
Confidence 99999999976543 211 1112 79999999999999999999999999999999999999988654322
Q ss_pred hHHHHHHHHHhhcCccccccccccC-CCCCH-HHHHHHHHHHHHhccCCCCCCCChhHHHHHHccCCc
Q 003278 734 LLVKRVHEFEARKRPLAELVDLSLN-GEYNH-KELMRLIKLGIACTLSNPELRPSMRQILSILDGNDK 799 (834)
Q Consensus 734 ~~~~~~~~~~~~~~~~~~~~d~~l~-~~~~~-~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~~~ 799 (834)
.+..|..... ....+.+++|+.+. +.+.. +++.++.++|++|++.+|.+||+|.+|+++|+.+.+
T Consensus 288 ~l~~w~~~~~-~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 288 SLVEWAKPLL-EEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred cHHHHHHHHH-HCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 2444443332 23478899999987 66665 789999999999999999999999999999965543
No 3
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-52 Score=459.99 Aligned_cols=546 Identities=22% Similarity=0.242 Sum_probs=351.8
Q ss_pred eeeccCCeEEEEEE---ECCCCeEEEEEEecccChh--hHHHHHHHHHHHHhCC-CCceeeEeeeEEeCCEEEEEEEccC
Q 003278 118 VLGSGGFGKVYRAV---LPSDGTVVAVKCLAEKGER--FEKTFAAELVAVAHLR-HRNLVRLRGWCVHEDQLLLVYDYMP 191 (834)
Q Consensus 118 ~LG~G~fG~Vy~~~---~~~~g~~vAvK~l~~~~~~--~~~~~~~E~~~l~~l~-H~nIv~l~g~~~~~~~~~lV~Ey~~ 191 (834)
++|+|+||.|+.+. -...|..+|+|.+.+.... .......|..++..++ ||.+|++.-.+..+...+++++|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 47999999999653 2346788999988654211 1124556778888887 9999999999999999999999999
Q ss_pred CCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhh
Q 003278 192 NRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHE 271 (834)
Q Consensus 192 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 271 (834)
+|.|...+... ..++......+...+|-|++++|.. +|+|||+|++||+++.+|++|+.|||+++.....
T Consensus 81 gg~lft~l~~~-------~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~ 150 (612)
T KOG0603|consen 81 GGDLFTRLSKE-------VMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKE 150 (612)
T ss_pred cchhhhccccC-------CchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhh
Confidence 99998887543 3356667777888999999999985 9999999999999999999999999999865332
Q ss_pred hhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHHH
Q 003278 272 LQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIR 351 (834)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~~ 351 (834)
...+||.-|||||.+. + ....+|+||||++.+||+||--||.. +-..
T Consensus 151 --------------------~~~cgt~eymApEI~~-g--h~~a~D~ws~gvl~felltg~~pf~~----------~~~~ 197 (612)
T KOG0603|consen 151 --------------------KIACGTYEYRAPEIIN-G--HLSAADWWSFGVLAFELLTGTLPFGG----------DTMK 197 (612)
T ss_pred --------------------hhcccchhhhhhHhhh-c--cCCcccchhhhhhHHHHhhCCCCCch----------HHHH
Confidence 1127999999999885 3 46779999999999999999988853 1111
Q ss_pred HHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchh-hHHHHhhcCCCCCCCCCCCccCCCcc---c-
Q 003278 352 RLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMK-WVIEAVSGSYSGKLPALPSFQSHPLY---I- 426 (834)
Q Consensus 352 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~-~V~~~l~~~~~~~~p~~ps~~s~p~~---~- 426 (834)
.+.... . ..+..-......+...-...+|..|--.. +++..+... +.+..+.+. .
T Consensus 198 ~Il~~~----~--------~~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h--------~f~~~i~~~~l~~r 257 (612)
T KOG0603|consen 198 RILKAE----L--------EMPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQH--------EFFQSIDWNELEAR 257 (612)
T ss_pred HHhhhc----c--------CCchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhcc--------chheeeeHhhHhhc
Confidence 111100 0 00000011122233333445566665432 233322210 011111110 0
Q ss_pred ccCCCCCCCCCCCcccc-ccCccc-CCCcccCCCCCcccccccccccccccCCCcCCCCCCccccccCcccccCCCcccc
Q 003278 427 SLSSPTNTSTSNTETTR-STNTTA-SNTTIASPSSNYVTAAGETIYATAECGGNTESKSNNSRSQRRNSFFMVETPREIS 504 (834)
Q Consensus 427 s~ssp~~~s~s~~~~s~-ss~ss~-s~~~~~spssn~v~a~~~~~~a~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (834)
...++ ..+........ .-.... +.++..+|....... ...+.. +. ....+...+.....
T Consensus 258 ~~~~~-fkp~~~~e~~~~~fd~eft~~~P~dsp~~~~~~s-~~~if~-----g~-----------sfva~~il~~~~~~- 318 (612)
T KOG0603|consen 258 SRPPP-FKPGSITERDVAQFDPEFTSQVPADSPLLSASGS-DHTIFS-----GP-----------SFVAPGVLEDAVTA- 318 (612)
T ss_pred CCCCC-CCCcccchhhhhhcCchhccCCcccCCCCCCCcc-ccchhc-----CC-----------CccChHHhhccccC-
Confidence 00000 00000000000 000000 000000000000000 000000 00 00000000000000
Q ss_pred HHHHHHHhhCcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCCChhHHHHHHHHHHHHHhc-cCCCceeEEEEEeeC
Q 003278 505 FKEIISATNNFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSNELQNLARL-RHRNLVQLCGWCTEQ 582 (834)
Q Consensus 505 ~~el~~at~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l-~HpNiv~l~g~~~~~ 582 (834)
..++.|.-...+|.|+|+.|-++.. ...+..+||++..... .-.+|+.++.+. +||||+++.+.|.+.
T Consensus 319 -----~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~-----~~~~e~~~~~~~~~h~niv~~~~v~~~~ 388 (612)
T KOG0603|consen 319 -----PFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD-----DNQDEIPISLLVRDHPNIVKSHDVYEDG 388 (612)
T ss_pred -----CcchhhccccccCCCCccceeeeeccccccchhheecccccc-----ccccccchhhhhcCCCcceeecceecCC
Confidence 0233444455699999999998884 5577889999875421 223467666555 799999999999999
Q ss_pred CeEEEEEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceee-cCCCCceEe
Q 003278 583 GEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITL-DPDMNPRLG 661 (834)
Q Consensus 583 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILl-d~~~~~ki~ 661 (834)
.+.++|||++.+|-+.+-+..... .. ..+..|+.+++.|+.|||+ ++||||||||+|||+ ++.++++|+
T Consensus 389 ~~~~~v~e~l~g~ell~ri~~~~~------~~-~e~~~w~~~lv~Av~~LH~---~gvvhRDLkp~NIL~~~~~g~lrlt 458 (612)
T KOG0603|consen 389 KEIYLVMELLDGGELLRRIRSKPE------FC-SEASQWAAELVSAVDYLHE---QGVVHRDLKPGNILLDGSAGHLRLT 458 (612)
T ss_pred ceeeeeehhccccHHHHHHHhcch------hH-HHHHHHHHHHHHHHHHHHh---cCeeecCCChhheeecCCCCcEEEE
Confidence 999999999999877766654321 22 5667799999999999996 799999999999999 588999999
Q ss_pred eeeeccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHH
Q 003278 662 SFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHE 741 (834)
Q Consensus 662 DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~ 741 (834)
|||.++.+... ..+.+=|..|.|||++....||+.+|+|||||+||||+||+.|+........+..++.
T Consensus 459 yFG~a~~~~~~----------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~- 527 (612)
T KOG0603|consen 459 YFGFWSELERS----------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQ- 527 (612)
T ss_pred EechhhhCchh----------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhc-
Confidence 99999876543 1233567889999999999999999999999999999999999874433212222111
Q ss_pred HHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 742 FEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 742 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
..++. ..-.+++..|+. .|++.||.+||+|.++..
T Consensus 528 ----~~~~s---------~~vS~~AKdLl~---~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 528 ----MPKFS---------ECVSDEAKDLLQ---QLLQVDPALRLGADEIGA 562 (612)
T ss_pred ----CCccc---------cccCHHHHHHHH---HhccCChhhCcChhhhcc
Confidence 11111 111244555554 799999999999999864
No 4
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-50 Score=435.08 Aligned_cols=260 Identities=30% Similarity=0.442 Sum_probs=210.0
Q ss_pred CcccccCCcEEEEEEECCCcEEEEEEecCCC-ChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCC-eEEEEEeccCCCc
Q 003278 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGMSK-CPALRTRFSNELQNLARLRHRNLVQLCGWCTEQG-EMLVIYDYSATRI 596 (834)
Q Consensus 519 ~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~-~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~-~~~lv~Ey~~~g~ 596 (834)
+.+|+|+||+||+|.+++...||||++.... .....+.|.+|+.+|++++|||||+|+|+|.+.. ..+|||||+++|+
T Consensus 47 ~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~Gs 126 (362)
T KOG0192|consen 47 EVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGS 126 (362)
T ss_pred hhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCc
Confidence 4499999999999999877779999987543 2333678999999999999999999999999987 7999999999999
Q ss_pred hhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCc-eeecccccCceeecCCC-CceEeeeeeccccccCCC
Q 003278 597 LSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQ-VIHRNITSSAITLDPDM-NPRLGSFALAEFLTRNDH 674 (834)
Q Consensus 597 L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~-iiHrDlK~~NILld~~~-~~ki~DfGla~~~~~~~~ 674 (834)
|.++|+.. ....++|..++++|.|||+||.|||+. . ||||||||+||||+.++ ++||+|||+++......
T Consensus 127 L~~~l~~~----~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~- 198 (362)
T KOG0192|consen 127 LSVLLHKK----RKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK- 198 (362)
T ss_pred HHHHHhhc----ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeecccc-
Confidence 99999874 123599999999999999999999974 4 99999999999999997 99999999998754321
Q ss_pred CCcccccCccccccccCccchhccc--cCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCccccc
Q 003278 675 GHRKATSGNRSVRGIFGYMSPEYIE--SGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAEL 752 (834)
Q Consensus 675 ~~~~~~~~~~~~~Gt~~Y~aPE~~~--~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (834)
...+...||+.|||||+++ ...|+.|+|||||||+||||+||+.||....+ ..+...+.. ...++
T Consensus 199 ------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-~~~~~~v~~--~~~Rp---- 265 (362)
T KOG0192|consen 199 ------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-VQVASAVVV--GGLRP---- 265 (362)
T ss_pred ------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHh--cCCCC----
Confidence 1122368999999999999 56899999999999999999999999986655 333332221 11222
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccCCccccccCc
Q 003278 753 VDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGNDKRFMEDGQ 806 (834)
Q Consensus 753 ~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~~~~~~~~~~ 806 (834)
.++.. ++.. +..++.+||+.||+.||+|.+|+..|+.+...+...+.
T Consensus 266 ---~~p~~-~~~~---l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~~~~ 312 (362)
T KOG0192|consen 266 ---PIPKE-CPPH---LSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISSAGP 312 (362)
T ss_pred ---CCCcc-CCHH---HHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcccCc
Confidence 11111 2333 44555579999999999999999999988776665544
No 5
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=5e-47 Score=413.07 Aligned_cols=255 Identities=33% Similarity=0.502 Sum_probs=205.7
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCeE-EEEEEecccC--hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCC-EEEEEE
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGTV-VAVKCLAEKG--ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHED-QLLLVY 187 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~~-vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~-~~~lV~ 187 (834)
.+...+.||+|+||+||+|.+. |+. ||||++.... ....+.|.+|+.+|++++|||||+|+|+|.+.. .+++||
T Consensus 42 ~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVt 119 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVT 119 (362)
T ss_pred HhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEE
Confidence 3445567999999999999994 566 9999987542 222678999999999999999999999999988 799999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCC-eecCCCCCCceEECCCC-ceEEeeccch
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQ-IIHRDVKTSNVMLDSQY-NARLGDFGLA 265 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-iiHrDlKp~NILld~~~-~~kl~DFGla 265 (834)
|||++|+|.++|+.. ....++|..+++|+.|||+||.|||++ + ||||||||+|||++.++ ++||||||++
T Consensus 120 Ey~~~GsL~~~l~~~-----~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGls 191 (362)
T KOG0192|consen 120 EYMPGGSLSVLLHKK-----RKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLS 191 (362)
T ss_pred EeCCCCcHHHHHhhc-----ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccc
Confidence 999999999999874 135799999999999999999999997 4 99999999999999997 9999999999
Q ss_pred hhhhhhhhhhhhcccccccccccccceeeeccccCCCcccccc-CCCCCcccceeehhhHHHHHHhCCccCCCCCCCccc
Q 003278 266 RWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQK-GSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQI 344 (834)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~ 344 (834)
+...... ...+...||+.|||||.+.. ...++.|+|||||||+||||+||+.||..... .+
T Consensus 192 r~~~~~~----------------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-~~- 253 (362)
T KOG0192|consen 192 REKVISK----------------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-VQ- 253 (362)
T ss_pred eeecccc----------------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-HH-
Confidence 8643210 11344679999999999974 35789999999999999999999999975433 11
Q ss_pred hHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcC
Q 003278 345 ILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGS 408 (834)
Q Consensus 345 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~ 408 (834)
-+..+...+....+. .+....+..|+..||+.||..||++.+++..|...
T Consensus 254 ----~~~~v~~~~~Rp~~p----------~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~ 303 (362)
T KOG0192|consen 254 ----VASAVVVGGLRPPIP----------KECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESI 303 (362)
T ss_pred ----HHHHHHhcCCCCCCC----------ccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHH
Confidence 111222222222211 11335688899999999999999999999998764
No 6
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-46 Score=385.83 Aligned_cols=253 Identities=27% Similarity=0.456 Sum_probs=208.3
Q ss_pred CCCCCeeeccCCeEEEEEEECCCCeEEEEEEecc-cChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCC-EEEEEEEcc
Q 003278 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE-KGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHED-QLLLVYDYM 190 (834)
Q Consensus 113 f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~-~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~-~~~lV~Ey~ 190 (834)
++..+.||+|..|+|||++++.+++.+|+|.+.. ......++..+|++++...+||+||++||.|..++ +..++||||
T Consensus 81 le~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYM 160 (364)
T KOG0581|consen 81 LERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYM 160 (364)
T ss_pred hhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhc
Confidence 4456789999999999999999999999999843 34567788999999999999999999999999999 599999999
Q ss_pred CCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhh
Q 003278 191 PNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEH 270 (834)
Q Consensus 191 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~ 270 (834)
.+|||+.++... +.+++...-+|+.+|++||.|||+. .+||||||||+|||++..|++||||||.++.+.+
T Consensus 161 DgGSLd~~~k~~-------g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvn 231 (364)
T KOG0581|consen 161 DGGSLDDILKRV-------GRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVN 231 (364)
T ss_pred CCCCHHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEeccccccHHhhh
Confidence 999999998643 4688999999999999999999974 5999999999999999999999999999997654
Q ss_pred hhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHH
Q 003278 271 ELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWI 350 (834)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~ 350 (834)
.. ..++.||..|||||.++.. .|+.++||||||++++|+++|+-|+..+.+. .....+..
T Consensus 232 S~------------------a~tfvGT~~YMsPERi~g~-~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~-~~~~~~Ll 291 (364)
T KOG0581|consen 232 SI------------------ANTFVGTSAYMSPERISGE-SYSVKSDIWSLGLSLLELAIGRFPYPPPNPP-YLDIFELL 291 (364)
T ss_pred hh------------------cccccccccccChhhhcCC-cCCcccceecccHHHHHHhhCCCCCCCcCCC-CCCHHHHH
Confidence 31 4567899999999999755 7899999999999999999999998654111 11122211
Q ss_pred HHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 351 RRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 351 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
.. +....-|++..+.+. ..+..+.-.||+.||.+||+..|+++.
T Consensus 292 ~~------Iv~~ppP~lP~~~fS----~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 292 CA------IVDEPPPRLPEGEFS----PEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred HH------HhcCCCCCCCcccCC----HHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 11 122223344433333 357888999999999999999998864
No 7
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-46 Score=384.16 Aligned_cols=257 Identities=21% Similarity=0.306 Sum_probs=208.3
Q ss_pred cccHHHHHHHhhCcCcCCcccccCCcEEEEEEEC-CCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEe
Q 003278 502 EISFKEIISATNNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCT 580 (834)
Q Consensus 502 ~~~~~el~~at~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~ 580 (834)
.+++.||+. .+.||+|..|+|||+..+ ++..+|.|.+..+..++.+++..+|++++.+.+||+||.+||+|.
T Consensus 75 ~i~~~dle~-------~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~ 147 (364)
T KOG0581|consen 75 GISLSDLER-------LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFY 147 (364)
T ss_pred ccCHHHhhh-------hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEE
Confidence 356666654 467999999999999975 578899999988888888999999999999999999999999999
Q ss_pred eCC-eEEEEEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCce
Q 003278 581 EQG-EMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPR 659 (834)
Q Consensus 581 ~~~-~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~k 659 (834)
.++ .+.|+||||.+|+|+.++...+ .+++...-+|+.+|.+||.|||+. +.||||||||+|||++..|.+|
T Consensus 148 ~~~~~isI~mEYMDgGSLd~~~k~~g------~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVK 219 (364)
T KOG0581|consen 148 SNGEEISICMEYMDGGSLDDILKRVG------RIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVK 219 (364)
T ss_pred eCCceEEeehhhcCCCCHHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEE
Confidence 988 5999999999999999987543 267777889999999999999973 7999999999999999999999
Q ss_pred EeeeeeccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCC-chhHHHH
Q 003278 660 LGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLP-EGLLVKR 738 (834)
Q Consensus 660 i~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~-~~~~~~~ 738 (834)
|||||.++.+... ...+++||..|||||.+.++.|+.++||||||++++|+++|+.|+....+ .......
T Consensus 220 icDFGVS~~lvnS---------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~L 290 (364)
T KOG0581|consen 220 ICDFGVSGILVNS---------IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFEL 290 (364)
T ss_pred eccccccHHhhhh---------hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHH
Confidence 9999999876542 23468999999999999999999999999999999999999999865311 1111111
Q ss_pred HHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 739 VHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 739 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
+...... . .|.++.....+++..++. .|++.||.+|||..|+++
T Consensus 291 l~~Iv~~-p------pP~lP~~~fS~ef~~FV~---~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 291 LCAIVDE-P------PPRLPEGEFSPEFRSFVS---CCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred HHHHhcC-C------CCCCCcccCCHHHHHHHH---HHhcCCcccCCCHHHHhc
Confidence 1111111 1 123333323345555554 799999999999999985
No 8
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-46 Score=404.16 Aligned_cols=250 Identities=24% Similarity=0.404 Sum_probs=202.9
Q ss_pred CcccccCCcEEEEEEECCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEeccCCCchh
Q 003278 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILS 598 (834)
Q Consensus 519 ~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~~g~L~ 598 (834)
++||+|-||.||.|.+++...||||.++..... .+.|.+|+++|.+|+|+|||+|+|+|...+.++||||||+.|+|.
T Consensus 212 ~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~--~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl 289 (468)
T KOG0197|consen 212 RELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMS--PEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLL 289 (468)
T ss_pred HHhcCCccceEEEEEEcCCCcccceEEeccccC--hhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHH
Confidence 579999999999999999989999998764322 367999999999999999999999999999999999999999999
Q ss_pred hhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCCCCcc
Q 003278 599 HLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRK 678 (834)
Q Consensus 599 ~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~~~~~ 678 (834)
++|+..+. ..+.-.+.+.++.|||+||+||++ +.+|||||.++|||++++..+||+|||||+....+... .
T Consensus 290 ~yLr~~~~----~~l~~~~Ll~~a~qIaeGM~YLes---~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~--~ 360 (468)
T KOG0197|consen 290 DYLRTREG----GLLNLPQLLDFAAQIAEGMAYLES---KNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYT--A 360 (468)
T ss_pred HHhhhcCC----CccchHHHHHHHHHHHHHHHHHHh---CCccchhhhhhheeeccCceEEEcccccccccCCCcee--e
Confidence 99987322 347778889999999999999996 79999999999999999999999999999954433221 1
Q ss_pred cccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcCcccccccccc
Q 003278 679 ATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSL 757 (834)
Q Consensus 679 ~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 757 (834)
... -.-...|+|||.+..+.++.|||||||||+||||+| |+.|+. .++...++..+.......+|
T Consensus 361 ~~~----~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~-~msn~ev~~~le~GyRlp~P--------- 426 (468)
T KOG0197|consen 361 SEG----GKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYP-GMSNEEVLELLERGYRLPRP--------- 426 (468)
T ss_pred cCC----CCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCC-CCCHHHHHHHHhccCcCCCC---------
Confidence 111 123456999999999999999999999999999999 555544 45555555555444333332
Q ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccCC
Q 003278 758 NGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGND 798 (834)
Q Consensus 758 ~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~~ 798 (834)
..++.++ .++|..||..+|++||||+.+...|+.+.
T Consensus 427 --~~CP~~v---Y~lM~~CW~~~P~~RPtF~~L~~~l~~~~ 462 (468)
T KOG0197|consen 427 --EGCPDEV---YELMKSCWHEDPEDRPTFETLREVLEDFF 462 (468)
T ss_pred --CCCCHHH---HHHHHHHhhCCcccCCCHHHHHHHHHHhh
Confidence 2344444 45667899999999999999988887654
No 9
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-46 Score=386.96 Aligned_cols=200 Identities=31% Similarity=0.557 Sum_probs=180.3
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc--ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK--GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYD 188 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 188 (834)
.+|...+.||+|+||+||+|+++.++..||||.+.++ .....+.+..|+.+|+.++|||||+|++++..++.+|||||
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVME 89 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVME 89 (429)
T ss_pred ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEE
Confidence 4688888999999999999999999999999999776 55667778999999999999999999999999999999999
Q ss_pred ccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCC------CceEEeec
Q 003278 189 YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQ------YNARLGDF 262 (834)
Q Consensus 189 y~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~------~~~kl~DF 262 (834)
||.+|+|..+|+.+ ..+++.+.+.++.|+|.||++||+. +||||||||.||||+.. -.+||+||
T Consensus 90 yC~gGDLs~yi~~~-------~~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADF 159 (429)
T KOG0595|consen 90 YCNGGDLSDYIRRR-------GRLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADF 159 (429)
T ss_pred eCCCCCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEeccc
Confidence 99999999999875 3588999999999999999999995 99999999999999764 45899999
Q ss_pred cchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCC
Q 003278 263 GLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLT 338 (834)
Q Consensus 263 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~ 338 (834)
|+||.+.... ...+.+|+|-|||||++... .|+.|+|+||.|++|||++||+.||+..
T Consensus 160 GfAR~L~~~~-----------------~a~tlcGSplYMAPEV~~~~-~YdAKADLWSiG~Ilyq~l~g~~Pf~a~ 217 (429)
T KOG0595|consen 160 GFARFLQPGS-----------------MAETLCGSPLYMAPEVIMSQ-QYDAKADLWSIGTILYQCLTGKPPFDAE 217 (429)
T ss_pred chhhhCCchh-----------------HHHHhhCCccccCHHHHHhc-cccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 9999876432 13567899999999999765 6899999999999999999999999854
No 10
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-45 Score=381.60 Aligned_cols=207 Identities=25% Similarity=0.406 Sum_probs=183.4
Q ss_pred hCcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCC-ChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEe
Q 003278 513 NNFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSK-CPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYD 590 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~E 590 (834)
.+|....+||.|+||+||+|+. +++..||||.+.... .+..++-+..|+++|+.++|||||+|++++...+.+++|||
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVME 89 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVME 89 (429)
T ss_pred ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEE
Confidence 4677778899999999999996 457899999998765 56667788999999999999999999999999999999999
Q ss_pred ccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCC------CCceEeeee
Q 003278 591 YSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPD------MNPRLGSFA 664 (834)
Q Consensus 591 y~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~------~~~ki~DfG 664 (834)
||.+|+|.+|++..+ .++......++.|+|.||++||+ ++||||||||.||||+.. -.+||+|||
T Consensus 90 yC~gGDLs~yi~~~~------~l~e~t~r~Fm~QLA~alq~L~~---~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFG 160 (429)
T KOG0595|consen 90 YCNGGDLSDYIRRRG------RLPEATARHFMQQLASALQFLHE---NNIIHRDLKPQNILLSTTARNDTSPVLKIADFG 160 (429)
T ss_pred eCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCcceEEeccCCCCCCCceEEecccc
Confidence 999999999998764 37888888899999999999996 799999999999999865 357999999
Q ss_pred eccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHH
Q 003278 665 LAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLV 736 (834)
Q Consensus 665 la~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~ 736 (834)
+|+.+.... ...++||++.|||||++..+.|+.|+|+||.|++||||+||+.||+...+...+.
T Consensus 161 fAR~L~~~~--------~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~ 224 (429)
T KOG0595|consen 161 FARFLQPGS--------MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLL 224 (429)
T ss_pred hhhhCCchh--------HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHH
Confidence 999876432 2456899999999999999999999999999999999999999998777665543
No 11
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5e-46 Score=368.88 Aligned_cols=260 Identities=23% Similarity=0.405 Sum_probs=208.8
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCeEEEEEEec--ccChhhHHHHHHHHHHHHhCCCCceeeEee-eEEeCCE-EEEEE
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLA--EKGERFEKTFAAELVAVAHLRHRNLVRLRG-WCVHEDQ-LLLVY 187 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~--~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g-~~~~~~~-~~lV~ 187 (834)
+|.+.++||+|+||+|||+....+|..||.|.+. ..+.+..+....|+.+|++|+|||||++++ .+.+.++ ++|||
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm 99 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM 99 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence 4777889999999999999999999999999875 234566778899999999999999999999 4555555 89999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCC-CeecCCCCCCceEECCCCceEEeeccchh
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLET-QIIHRDVKTSNVMLDSQYNARLGDFGLAR 266 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~iiHrDlKp~NILld~~~~~kl~DFGla~ 266 (834)
|||..|+|...+..-+. ....+++..+++++.|++.||..+|...+. -|+||||||.||+|+.+|.+||+||||+|
T Consensus 100 E~c~~GDLsqmIk~~K~---qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r 176 (375)
T KOG0591|consen 100 ELCDAGDLSQMIKHFKK---QKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGR 176 (375)
T ss_pred HhhcccCHHHHHHHHHh---ccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHh
Confidence 99999999999976432 346789999999999999999999985322 29999999999999999999999999999
Q ss_pred hhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchH
Q 003278 267 WLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346 (834)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l 346 (834)
++.++.++ +++.+|||.||+||.+... .|+.||||||+||++|||+.-++||... ++
T Consensus 177 ~l~s~~tf----------------A~S~VGTPyYMSPE~i~~~-~Y~~kSDiWslGCllyEMcaL~~PF~g~------n~ 233 (375)
T KOG0591|consen 177 FLSSKTTF----------------AHSLVGTPYYMSPERIHES-GYNFKSDIWSLGCLLYEMCALQSPFYGD------NL 233 (375)
T ss_pred HhcchhHH----------------HHhhcCCCcccCHHHHhcC-CCCcchhHHHHHHHHHHHHhcCCCcccc------cH
Confidence 88665332 4667899999999999765 6899999999999999999999999643 33
Q ss_pred HHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhc
Q 003278 347 LDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSG 407 (834)
Q Consensus 347 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~ 407 (834)
......+ ..|... ++.+..| ...+..|+-.|+..||+.||+....+..+..
T Consensus 234 ~~L~~KI-~qgd~~-----~~p~~~Y----S~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 234 LSLCKKI-EQGDYP-----PLPDEHY----STDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred HHHHHHH-HcCCCC-----CCcHHHh----hhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 3322222 223222 2221222 2457889999999999999996655555443
No 12
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-44 Score=376.80 Aligned_cols=254 Identities=26% Similarity=0.357 Sum_probs=200.3
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccCh------h-hHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGE------R-FEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQL 183 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~------~-~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~ 183 (834)
+.|-..+.||+|+||.|-+|..+.+|+.||||++.+... . ......+|+++|++|+|||||+++++|..++..
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~ 251 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS 251 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence 346677899999999999999999999999999865311 1 122346999999999999999999999999999
Q ss_pred EEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCC---CceEEe
Q 003278 184 LLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQ---YNARLG 260 (834)
Q Consensus 184 ~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~---~~~kl~ 260 (834)
||||||+.||+|.+.+-.+ ..+.+...+-++.|++.|+.|||++ ||+||||||+||||..+ ..+||+
T Consensus 252 YmVlE~v~GGeLfd~vv~n-------k~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKIt 321 (475)
T KOG0615|consen 252 YMVLEYVEGGELFDKVVAN-------KYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKIT 321 (475)
T ss_pred EEEEEEecCccHHHHHHhc-------cccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEec
Confidence 9999999999999998654 3456667788999999999999997 99999999999999765 779999
Q ss_pred eccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCC--CCCcccceeehhhHHHHHHhCCccCCCC
Q 003278 261 DFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGS--VATAKSDVFSFGIVVLEVVSGRRAVDLT 338 (834)
Q Consensus 261 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~--~~~~ksDV~SfGvvl~ElltG~~p~~~~ 338 (834)
|||+|+..... .-..+.||||.|.|||++.... .+..|+|+||+|||||-++||-+||...
T Consensus 322 DFGlAK~~g~~-----------------sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~ 384 (475)
T KOG0615|consen 322 DFGLAKVSGEG-----------------SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEE 384 (475)
T ss_pred ccchhhccccc-----------------eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccc
Confidence 99999975421 1246789999999999986533 2345899999999999999999999866
Q ss_pred CCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 339 YPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 339 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
+.+. .+.+.+ ..|+.... +.....--++..+|+.+-|..||++||+..|+++.
T Consensus 385 ~~~~--sl~eQI----~~G~y~f~-------p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 385 YTDP--SLKEQI----LKGRYAFG-------PLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred cCCc--cHHHHH----hcCccccc-------ChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 5442 222211 22322211 00111122567789999999999999999998763
No 13
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.2e-44 Score=391.17 Aligned_cols=249 Identities=27% Similarity=0.457 Sum_probs=206.0
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc---ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK---GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVY 187 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 187 (834)
..|...+.||+|||..||+++...+|..||+|++.++ .....+...+||++.+.|+|||||+++++|++.++.|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 3588889999999999999999899999999999763 3455678899999999999999999999999999999999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhh
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARW 267 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 267 (834)
|+|++|+|..++.++ .++++..+..++.||+.||.|||+. +|||||||..|++|++++++||+|||||..
T Consensus 98 ELC~~~sL~el~Krr-------k~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~ 167 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRR-------KPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQ 167 (592)
T ss_pred EecCCccHHHHHHhc-------CCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeee
Confidence 999999999998754 4789999999999999999999996 999999999999999999999999999987
Q ss_pred hhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHH
Q 003278 268 LEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347 (834)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~ 347 (834)
+..+.. ...++||||.|+|||++... .++..+||||+||++|-||+|++||+... +.
T Consensus 168 le~~~E----------------rk~TlCGTPNYIAPEVl~k~-gHsfEvDiWSlGcvmYtLL~G~PPFetk~------vk 224 (592)
T KOG0575|consen 168 LEYDGE----------------RKKTLCGTPNYIAPEVLNKS-GHSFEVDIWSLGCVMYTLLVGRPPFETKT------VK 224 (592)
T ss_pred ecCccc----------------ccceecCCCcccChhHhccC-CCCCchhhhhhhhHHHhhhhCCCCcccch------HH
Confidence 753311 14678999999999999744 57999999999999999999999997532 11
Q ss_pred HHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 348 DWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 348 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
+-...+.. ... .++ ... .....+|+..-|+.||.+|||..+|+..
T Consensus 225 ety~~Ik~-~~Y------~~P-~~l----s~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 225 ETYNKIKL-NEY------SMP-SHL----SAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred HHHHHHHh-cCc------ccc-ccc----CHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 11111111 110 010 011 1234577888899999999999999974
No 14
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-45 Score=388.00 Aligned_cols=275 Identities=25% Similarity=0.399 Sum_probs=211.4
Q ss_pred CccccHHHHHHHhhCcCcCCcccccCCcEEEEEEECCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEE
Q 003278 500 PREISFKEIISATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWC 579 (834)
Q Consensus 500 ~~~~~~~el~~at~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~ 579 (834)
..++.|++| ++.+-+|.|+-|.||.|.+.+. .||||+++. .=..+|+-|++|+||||+.|.|+|
T Consensus 118 ~WeiPFe~I-------sELeWlGSGaQGAVF~Grl~ne-tVAVKKV~e--------lkETdIKHLRkLkH~NII~FkGVC 181 (904)
T KOG4721|consen 118 LWEIPFEEI-------SELEWLGSGAQGAVFLGRLHNE-TVAVKKVRE--------LKETDIKHLRKLKHPNIITFKGVC 181 (904)
T ss_pred hccCCHHHh-------hhhhhhccCcccceeeeeccCc-eehhHHHhh--------hhhhhHHHHHhccCcceeeEeeee
Confidence 467788776 4457799999999999999875 599998742 123589999999999999999999
Q ss_pred eeCCeEEEEEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCce
Q 003278 580 TEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPR 659 (834)
Q Consensus 580 ~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~k 659 (834)
+....++||||||+.|-|...|+... .+.-...+++..+||.||.|||. ..|||||||+-||||..+-.+|
T Consensus 182 tqsPcyCIiMEfCa~GqL~~VLka~~------~itp~llv~Wsk~IA~GM~YLH~---hKIIHRDLKSPNiLIs~~d~VK 252 (904)
T KOG4721|consen 182 TQSPCYCIIMEFCAQGQLYEVLKAGR------PITPSLLVDWSKGIAGGMNYLHL---HKIIHRDLKSPNILISYDDVVK 252 (904)
T ss_pred cCCceeEEeeeccccccHHHHHhccC------ccCHHHHHHHHHHhhhhhHHHHH---hhHhhhccCCCceEeeccceEE
Confidence 99999999999999999999997653 24445567889999999999997 6899999999999999999999
Q ss_pred EeeeeeccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHH
Q 003278 660 LGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRV 739 (834)
Q Consensus 660 i~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~ 739 (834)
|+|||-++.+... +...+++||..|||||+|++.+.++|+||||||||||||+||..|+..-.... ++
T Consensus 253 IsDFGTS~e~~~~--------STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssA-II--- 320 (904)
T KOG4721|consen 253 ISDFGTSKELSDK--------STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSA-II--- 320 (904)
T ss_pred eccccchHhhhhh--------hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhe-eE---
Confidence 9999999865432 12346899999999999999999999999999999999999999985321110 00
Q ss_pred HHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccCCccccccCc--cccchHHHhhh
Q 003278 740 HEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGNDKRFMEDGQ--MTENLEEWKQR 817 (834)
Q Consensus 740 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~~~~~~~~~~--~~~~~~~~~~~ 817 (834)
|-.+... ..+. . .+.+++-+.-|++ +||...|..||+|++|+.-|+-......+..+ +.+.+.+|++.
T Consensus 321 --wGVGsNs-L~Lp---v-PstcP~GfklL~K---qcw~sKpRNRPSFrqil~HldIa~pell~~tee~yf~sq~swrEe 390 (904)
T KOG4721|consen 321 --WGVGSNS-LHLP---V-PSTCPDGFKLLLK---QCWNSKPRNRPSFRQILLHLDIASPELLSTTEETYFKSQASWREE 390 (904)
T ss_pred --EeccCCc-cccc---C-cccCchHHHHHHH---HHHhcCCCCCccHHHHHHHHhhcCHHHhcccHHHHHHHHHHHHHH
Confidence 0001111 1111 1 2234445554444 79999999999999999998866655443322 44556667765
Q ss_pred chhc
Q 003278 818 NECS 821 (834)
Q Consensus 818 ~~~~ 821 (834)
-.|-
T Consensus 391 vk~h 394 (904)
T KOG4721|consen 391 VKLH 394 (904)
T ss_pred HHHh
Confidence 5543
No 15
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-43 Score=384.09 Aligned_cols=254 Identities=29% Similarity=0.455 Sum_probs=203.9
Q ss_pred CCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEccCC
Q 003278 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPN 192 (834)
Q Consensus 113 f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 192 (834)
+...+.||+|-||+||.|.+ .....||||.++.. ....+.|.+|+.+|.+|+|+|||+|+|+|..++.++||||||++
T Consensus 208 l~l~~~LG~G~FG~V~~g~~-~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~ 285 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKW-NGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPK 285 (468)
T ss_pred HHHHHHhcCCccceEEEEEE-cCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEeccc
Confidence 44567899999999999999 34558999998764 34567899999999999999999999999999999999999999
Q ss_pred CCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhh
Q 003278 193 RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHEL 272 (834)
Q Consensus 193 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~ 272 (834)
|+|.++|... ....+.-.+.+.++.|||+|++||+++ ++|||||.+.|||++++..+||+||||||.+.++
T Consensus 286 GsLl~yLr~~-----~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~- 356 (468)
T KOG0197|consen 286 GSLLDYLRTR-----EGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGDD- 356 (468)
T ss_pred CcHHHHhhhc-----CCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCCC-
Confidence 9999999762 235678889999999999999999996 9999999999999999999999999999954333
Q ss_pred hhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCccchHHHHHH
Q 003278 273 QYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQIILLDWIR 351 (834)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~~l~~~~~ 351 (834)
.|..+ ....-...|.|||.+..+ .++.|||||||||+||||+| |+.|+... ...+.+
T Consensus 357 ~Y~~~--------------~~~kfPIkWtAPEa~~~~-~FS~kSDVWSFGVlL~E~fT~G~~py~~m------sn~ev~- 414 (468)
T KOG0197|consen 357 EYTAS--------------EGGKFPIKWTAPEALNYG-KFSSKSDVWSFGVLLWELFTYGRVPYPGM------SNEEVL- 414 (468)
T ss_pred ceeec--------------CCCCCCceecCHHHHhhC-CcccccceeehhhhHHHHhccCCCCCCCC------CHHHHH-
Confidence 22111 111124679999999877 57999999999999999999 66665432 222222
Q ss_pred HHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcCC
Q 003278 352 RLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGSY 409 (834)
Q Consensus 352 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~~ 409 (834)
....+|..+...+. ....+.+|+..||+.+|++|||+..+...|..++
T Consensus 415 ~~le~GyRlp~P~~----------CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~ 462 (468)
T KOG0197|consen 415 ELLERGYRLPRPEG----------CPDEVYELMKSCWHEDPEDRPTFETLREVLEDFF 462 (468)
T ss_pred HHHhccCcCCCCCC----------CCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhh
Confidence 33445554433322 2357899999999999999999998888877654
No 16
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6e-45 Score=361.24 Aligned_cols=256 Identities=23% Similarity=0.340 Sum_probs=199.2
Q ss_pred CcCcCCcccccCCcEEEEEE-ECCCcEEEEEEecCCC-ChhHHHHHHHHHHHHHhccCCCceeEEE-EEeeCCe-EEEEE
Q 003278 514 NFSESQRVAEMDFGTAYQGF-LDNHQYVLVKRLGMSK-CPALRTRFSNELQNLARLRHRNLVQLCG-WCTEQGE-MLVIY 589 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~-~~~~~~~f~~E~~~l~~l~HpNiv~l~g-~~~~~~~-~~lv~ 589 (834)
+|...++||.|+||.|||+. +.+|..||.|.+.... +...++....|+.+|++|+|||||++++ -+.+..+ ++|||
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm 99 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM 99 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence 34556779999999999998 6789999999987543 3456778899999999999999999999 3444444 89999
Q ss_pred eccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCC-ceeecccccCceeecCCCCceEeeeeeccc
Q 003278 590 DYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNE-QVIHRNITSSAITLDPDMNPRLGSFALAEF 668 (834)
Q Consensus 590 Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~-~iiHrDlK~~NILld~~~~~ki~DfGla~~ 668 (834)
|||..|+|.+.+.+... ....+++....+++.|+++||..+|+.+++ .|+||||||.||+||.+|.+|++||||+++
T Consensus 100 E~c~~GDLsqmIk~~K~--qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 100 ELCDAGDLSQMIKHFKK--QKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF 177 (375)
T ss_pred HhhcccCHHHHHHHHHh--ccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhH
Confidence 99999999999876432 223578888899999999999999985533 399999999999999999999999999998
Q ss_pred cccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCc
Q 003278 669 LTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRP 748 (834)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~ 748 (834)
+... +....+.+|||.||+||.+.+..|+.||||||+||++|||..-+.||.... --.+...+.. ..
T Consensus 178 l~s~-------~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n-~~~L~~KI~q-----gd 244 (375)
T KOG0591|consen 178 LSSK-------TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDN-LLSLCKKIEQ-----GD 244 (375)
T ss_pred hcch-------hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccccc-HHHHHHHHHc-----CC
Confidence 7643 223456899999999999999999999999999999999999999997651 1111111111 11
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 749 LAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 749 ~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
. +.++.+.....+.+++. .|++.||+.||+.-.+++
T Consensus 245 ~-----~~~p~~~YS~~l~~li~---~ci~vd~~~RP~t~~~v~ 280 (375)
T KOG0591|consen 245 Y-----PPLPDEHYSTDLRELIN---MCIAVDPEQRPDTVPYVQ 280 (375)
T ss_pred C-----CCCcHHHhhhHHHHHHH---HHccCCcccCCCcchHHH
Confidence 1 11222333345555554 799999999998444443
No 17
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=2e-43 Score=366.13 Aligned_cols=245 Identities=27% Similarity=0.375 Sum_probs=199.1
Q ss_pred hcCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC---hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEE
Q 003278 109 GSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLL 185 (834)
Q Consensus 109 ~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 185 (834)
.-++|+..++||+|+||+||.++.+.+++.+|+|+++++. ....+....|..+|.+++||.||+|+-.|.+.+.+||
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 3467999999999999999999999999999999997652 2235667899999999999999999999999999999
Q ss_pred EEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccch
Q 003278 186 VYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLA 265 (834)
Q Consensus 186 V~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 265 (834)
|+||++||.|..+|.+. ..+++.....++.+|+.||.|||+. +||||||||+|||||.+|+++|+||||+
T Consensus 103 Vld~~~GGeLf~hL~~e-------g~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~ 172 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQRE-------GRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLC 172 (357)
T ss_pred EEeccCCccHHHHHHhc-------CCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccc
Confidence 99999999999999653 4688888999999999999999996 9999999999999999999999999999
Q ss_pred hhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccch
Q 003278 266 RWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII 345 (834)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~ 345 (834)
+..... ...+.+++||+.|||||++... .++..+|+||+||++|||+||.+||....
T Consensus 173 k~~~~~----------------~~~t~tfcGT~eYmAPEil~~~-gy~~~vDWWsLGillYeML~G~pPF~~~~------ 229 (357)
T KOG0598|consen 173 KEDLKD----------------GDATRTFCGTPEYMAPEILLGK-GYDKAVDWWSLGILLYEMLTGKPPFYAED------ 229 (357)
T ss_pred hhcccC----------------CCccccccCCccccChHHHhcC-CCCcccchHhHHHHHHHHhhCCCCCcCcc------
Confidence 843211 1125668999999999999765 67999999999999999999999997542
Q ss_pred HHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCc
Q 003278 346 LLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPS 397 (834)
Q Consensus 346 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs 397 (834)
...+....... ++.. .+ ...+ ....++...-+..||++|--
T Consensus 230 ~~~~~~~I~~~-k~~~-~p-----~~ls----~~ardll~~LL~rdp~~RLg 270 (357)
T KOG0598|consen 230 VKKMYDKILKG-KLPL-PP-----GYLS----EEARDLLKKLLKRDPRQRLG 270 (357)
T ss_pred HHHHHHHHhcC-cCCC-CC-----ccCC----HHHHHHHHHHhccCHHHhcC
Confidence 22333333322 2110 00 1111 23556677778899999953
No 18
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-43 Score=381.82 Aligned_cols=266 Identities=27% Similarity=0.389 Sum_probs=206.1
Q ss_pred CccccHHHHHHHhhCcCcCCcccccCCcEEEEEEECCCcEEEEEEecCCC-ChhHHHHHHHHHHHHHhccCCCceeEEEE
Q 003278 500 PREISFKEIISATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSK-CPALRTRFSNELQNLARLRHRNLVQLCGW 578 (834)
Q Consensus 500 ~~~~~~~el~~at~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~-~~~~~~~f~~E~~~l~~l~HpNiv~l~g~ 578 (834)
..++.++|+. -..+||+|.||+||||.+.+ .||||.++... .++..+.|++|+.++++-||.||+-|+||
T Consensus 386 ~WeIp~~ev~-------l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~ 456 (678)
T KOG0193|consen 386 EWEIPPEEVL-------LGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGA 456 (678)
T ss_pred ccccCHHHhh-------ccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehh
Confidence 3455565554 45789999999999999754 69999998764 45677899999999999999999999999
Q ss_pred EeeCCeEEEEEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCc
Q 003278 579 CTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNP 658 (834)
Q Consensus 579 ~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ 658 (834)
|...+. .||.-+|++.+|..+|+-.. ..++..+.++||.|||.||.|||. ++|||||||+.||+|.+++.+
T Consensus 457 ~~~p~~-AIiTqwCeGsSLY~hlHv~e-----tkfdm~~~idIAqQiaqGM~YLHA---K~IIHrDLKSnNIFl~~~~kV 527 (678)
T KOG0193|consen 457 CMNPPL-AIITQWCEGSSLYTHLHVQE-----TKFDMNTTIDIAQQIAQGMDYLHA---KNIIHRDLKSNNIFLHEDLKV 527 (678)
T ss_pred hcCCce-eeeehhccCchhhhhccchh-----hhhhHHHHHHHHHHHHHhhhhhhh---hhhhhhhccccceEEccCCcE
Confidence 998776 99999999999999997543 347888889999999999999996 799999999999999999999
Q ss_pred eEeeeeeccccccCCCCCcccccCccccccccCccchhcccc---CCCCccCcchhhHHHHHHHHhCCCccCCCCCchhH
Q 003278 659 RLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIES---GEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLL 735 (834)
Q Consensus 659 ki~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~---~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~ 735 (834)
||+||||+..-.... .........|..-|||||+++. .+|+..+||||||||+|||+||..|+... ..+.+
T Consensus 528 kIgDFGLatvk~~w~-----g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~-~~dqI 601 (678)
T KOG0193|consen 528 KIGDFGLATVKTRWS-----GEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQ-NRDQI 601 (678)
T ss_pred EEecccceeeeeeec-----cccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCC-Chhhe
Confidence 999999996533221 1122234468888999999964 57899999999999999999999999733 22222
Q ss_pred HHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccCCc
Q 003278 736 VKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGNDK 799 (834)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~~~ 799 (834)
+..+-+++.. .|.......+++++ .+|+..||..+|++||.|.+|+..|+...+
T Consensus 602 ifmVGrG~l~-------pd~s~~~s~~pk~m---k~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 602 IFMVGRGYLM-------PDLSKIRSNCPKAM---KRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred EEEecccccC-------ccchhhhccCHHHH---HHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 2222111111 12222223344454 455568999999999999999997765433
No 19
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.3e-43 Score=381.97 Aligned_cols=247 Identities=21% Similarity=0.384 Sum_probs=203.1
Q ss_pred CcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCC--CChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEe
Q 003278 514 NFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMS--KCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYD 590 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~--~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~E 590 (834)
.|...+.||+|||..+|++.. +.|+.||+|++... ..+..+++..+||++.+.|+|||||+|+++|.+.+++|||.|
T Consensus 19 ~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLE 98 (592)
T KOG0575|consen 19 RYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLE 98 (592)
T ss_pred eeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEE
Confidence 477788999999999999996 88999999998753 234567889999999999999999999999999999999999
Q ss_pred ccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccc
Q 003278 591 YSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLT 670 (834)
Q Consensus 591 y~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~ 670 (834)
+|.+|+|.+++... .++++.....+++||+.||.|||+ .+|||||||-.|+||++++++||+|||||..+.
T Consensus 99 LC~~~sL~el~Krr------k~ltEpEary~l~QIv~GlkYLH~---~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le 169 (592)
T KOG0575|consen 99 LCHRGSLMELLKRR------KPLTEPEARYFLRQIVEGLKYLHS---LGIIHRDLKLGNLFLNENMNVKIGDFGLATQLE 169 (592)
T ss_pred ecCCccHHHHHHhc------CCCCcHHHHHHHHHHHHHHHHHHh---cCceecccchhheeecCcCcEEecccceeeeec
Confidence 99999999998732 358899999999999999999997 689999999999999999999999999998876
Q ss_pred cCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCccc
Q 003278 671 RNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLA 750 (834)
Q Consensus 671 ~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (834)
..+. ...+.||||-|+|||++.....+..+||||+|||+|-|++|++||+...-.... ..+.. .
T Consensus 170 ~~~E-------rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety-~~Ik~---~----- 233 (592)
T KOG0575|consen 170 YDGE-------RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETY-NKIKL---N----- 233 (592)
T ss_pred Cccc-------ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHH-HHHHh---c-----
Confidence 4421 234689999999999999888999999999999999999999999754222111 11111 0
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 751 ELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 751 ~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
+-.++. .-..++..|+. +.+++||.+|||+.+|+.
T Consensus 234 ---~Y~~P~-~ls~~A~dLI~---~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 234 ---EYSMPS-HLSAEAKDLIR---KLLRPNPSERPSLDEVLD 268 (592)
T ss_pred ---Cccccc-ccCHHHHHHHH---HHhcCCcccCCCHHHHhc
Confidence 111111 11234455554 678899999999999985
No 20
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.2e-43 Score=401.73 Aligned_cols=257 Identities=24% Similarity=0.351 Sum_probs=207.8
Q ss_pred cCCcccccCCcEEEEEEECC------CcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEe
Q 003278 517 ESQRVAEMDFGTAYQGFLDN------HQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYD 590 (834)
Q Consensus 517 ~~~~ig~g~~g~vy~~~~~~------~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~E 590 (834)
..+.||+|.||.||+|...+ .+.||||.++.....+.+.+|.+|+++|+.++|||||+|+|+|.+++..++|+|
T Consensus 490 ~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFE 569 (774)
T KOG1026|consen 490 FKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFE 569 (774)
T ss_pred ehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEE
Confidence 34669999999999998643 468999999988888788999999999999999999999999999999999999
Q ss_pred ccCCCchhhhhhcCCCCC----C----CcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEee
Q 003278 591 YSATRILSHLLFHNNHRI----G----HSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGS 662 (834)
Q Consensus 591 y~~~g~L~~~l~~~~~~~----~----~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~D 662 (834)
||..|||+++|....... + ..+|+-.+-+.||.|||.||+||-+ ...|||||.++|+|+.+++.+||+|
T Consensus 570 Ym~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~---~~FVHRDLATRNCLVge~l~VKIsD 646 (774)
T KOG1026|consen 570 YMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSS---HHFVHRDLATRNCLVGENLVVKISD 646 (774)
T ss_pred ecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CcccccchhhhhceeccceEEEecc
Confidence 999999999998653221 1 2348888999999999999999986 6899999999999999999999999
Q ss_pred eeeccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHH
Q 003278 663 FALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHE 741 (834)
Q Consensus 663 fGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~ 741 (834)
|||++-+-..++... .... -=.++|||||.|..++||++||||||||||||++| |+.|++ ...+.+++..+..
T Consensus 647 fGLsRdiYssDYYk~-~~~t----~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~-glSn~EVIe~i~~ 720 (774)
T KOG1026|consen 647 FGLSRDIYSSDYYKV-RGNT----LLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYY-GLSNQEVIECIRA 720 (774)
T ss_pred cccchhhhhhhhhcc-cCCc----eeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCccc-ccchHHHHHHHHc
Confidence 999987655543211 0000 11357999999999999999999999999999998 666665 4555555555443
Q ss_pred HHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHcc
Q 003278 742 FEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDG 796 (834)
Q Consensus 742 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~ 796 (834)
.. +.+. .+.++. ++..||+.||+.+|++||+|+||-..|+.
T Consensus 721 g~-----lL~~------Pe~CP~---~vY~LM~~CW~~~P~~RPsF~eI~~~L~~ 761 (774)
T KOG1026|consen 721 GQ-----LLSC------PENCPT---EVYSLMLECWNENPKRRPSFKEIHSRLQA 761 (774)
T ss_pred CC-----cccC------CCCCCH---HHHHHHHHHhhcCcccCCCHHHHHHHHHH
Confidence 21 1111 123343 45667789999999999999999998854
No 21
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=3.7e-43 Score=351.84 Aligned_cols=265 Identities=25% Similarity=0.325 Sum_probs=205.0
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc--ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEc
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK--GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDY 189 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 189 (834)
.|+...++|+|+||+||||+++.+|++||||++.+. +....+-.++|+++|++|+|+|+|.|+..|.....++||+||
T Consensus 3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~ 82 (396)
T KOG0593|consen 3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY 82 (396)
T ss_pred HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence 466778999999999999999999999999998654 345567789999999999999999999999999999999999
Q ss_pred cCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhh
Q 003278 190 MPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLE 269 (834)
Q Consensus 190 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~ 269 (834)
|...-|+. |.+.+ ..++.....+|+.|+++|+.|+|++ +||||||||+|||++.++.+||||||+||.+.
T Consensus 83 ~dhTvL~e-Le~~p------~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~ 152 (396)
T KOG0593|consen 83 CDHTVLHE-LERYP------NGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLS 152 (396)
T ss_pred cchHHHHH-HHhcc------CCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhc
Confidence 98755544 43332 3477888999999999999999996 89999999999999999999999999999764
Q ss_pred hhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHH
Q 003278 270 HELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDW 349 (834)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~ 349 (834)
... ..-|..+.|.+|.|||.+.....|...+||||.||++.||+||.+-|...++-++..++.-
T Consensus 153 ~pg----------------d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~k 216 (396)
T KOG0593|consen 153 APG----------------DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRK 216 (396)
T ss_pred CCc----------------chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHH
Confidence 211 1135567899999999998767889999999999999999999988876554444332211
Q ss_pred --------HHHHhhcCcc------ccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHH
Q 003278 350 --------IRRLSDEGKV------LQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIE 403 (834)
Q Consensus 350 --------~~~~~~~~~~------~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~ 403 (834)
-..+...... .+.-++...+..++. -...+++++..|++.||++|++.++++.
T Consensus 217 tLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~-~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 217 TLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPK-ISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred HHcccCHHHHHHhccCCceeeeecCCCCCccchhhhccc-chHHHHHHHHHHhcCCccccccHHHHhc
Confidence 0111221111 111111111111111 1235789999999999999999999875
No 22
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.6e-42 Score=392.81 Aligned_cols=266 Identities=33% Similarity=0.493 Sum_probs=218.2
Q ss_pred hhcCCCCCCCeeeccCCeEEEEEEEC-----CCCeEEEEEEecccChh-hHHHHHHHHHHHHhCCCCceeeEeeeEEeCC
Q 003278 108 IGSNGFDEDEVLGSGGFGKVYRAVLP-----SDGTVVAVKCLAEKGER-FEKTFAAELVAVAHLRHRNLVRLRGWCVHED 181 (834)
Q Consensus 108 ~~t~~f~~~~~LG~G~fG~Vy~~~~~-----~~g~~vAvK~l~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~ 181 (834)
..+.+-...+.||+|+||+||+|... .+.+.||||.+++..+. ..++|.+|+++|..++|||||+|+|.|.+++
T Consensus 483 i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~ 562 (774)
T KOG1026|consen 483 IPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGD 562 (774)
T ss_pred echhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCC
Confidence 34455666789999999999999864 23568999999887655 7889999999999999999999999999999
Q ss_pred EEEEEEEccCCCCHhHHHhcCCCccc---c----CCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCC
Q 003278 182 QLLLVYDYMPNRSLDRVLFRRPENLE---A----AAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQ 254 (834)
Q Consensus 182 ~~~lV~Ey~~~gsL~~~l~~~~~~~~---~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~ 254 (834)
.++||+|||..|||.++|.-+..... . ..+|+-.+.+.||.|||.||+||-++ .+|||||...|+|+.++
T Consensus 563 P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~ 639 (774)
T KOG1026|consen 563 PLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGEN 639 (774)
T ss_pred eeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccc
Confidence 99999999999999999975532211 1 34599999999999999999999996 89999999999999999
Q ss_pred CceEEeeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCc
Q 003278 255 YNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRR 333 (834)
Q Consensus 255 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~ 333 (834)
..+||+||||+|.+....+|..... + .=.++|||||.+..+ .+|.+||||||||||||++| |+.
T Consensus 640 l~VKIsDfGLsRdiYssDYYk~~~~------------t--~lPIRWMppEsIly~-kFTteSDVWs~GVvLWEIFsyG~Q 704 (774)
T KOG1026|consen 640 LVVKISDFGLSRDIYSSDYYKVRGN------------T--LLPIRWMPPESILYG-KFTTESDVWSFGVVLWEIFSYGKQ 704 (774)
T ss_pred eEEEecccccchhhhhhhhhcccCC------------c--eeeeecCCHHHhhcC-cccchhhhhhhhhhhhhhhccccC
Confidence 9999999999998766655543210 0 124789999999988 57999999999999999998 888
Q ss_pred cCCCCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcC
Q 003278 334 AVDLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGS 408 (834)
Q Consensus 334 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~ 408 (834)
|+..-..+ + +-.....|+++...+.. ...+..|++.||+.+|.+||+++||-..|+..
T Consensus 705 Py~glSn~-E------VIe~i~~g~lL~~Pe~C----------P~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~ 762 (774)
T KOG1026|consen 705 PYYGLSNQ-E------VIECIRAGQLLSCPENC----------PTEVYSLMLECWNENPKRRPSFKEIHSRLQAW 762 (774)
T ss_pred cccccchH-H------HHHHHHcCCcccCCCCC----------CHHHHHHHHHHhhcCcccCCCHHHHHHHHHHH
Confidence 87543222 1 22344567766554433 34799999999999999999999999998764
No 23
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-41 Score=359.94 Aligned_cols=258 Identities=26% Similarity=0.448 Sum_probs=202.0
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCC--EEEEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHED--QLLLVYD 188 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~--~~~lV~E 188 (834)
.++...+.||+|+||.||++....+|...|||.+...+....+.+.+|+.+|++++|||||+++|.....+ .+++.||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 45677889999999999999998889999999886553333667899999999999999999999855544 6999999
Q ss_pred ccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECC-CCceEEeeccchhh
Q 003278 189 YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDS-QYNARLGDFGLARW 267 (834)
Q Consensus 189 y~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~-~~~~kl~DFGla~~ 267 (834)
|+++|||.+++.+.. ..|++..+..+..||++||+|||++ +||||||||+|||++. ++.+||+|||+++.
T Consensus 97 y~~~GsL~~~~~~~g------~~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~ 167 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYG------GKLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKK 167 (313)
T ss_pred ccCCCcHHHHHHHcC------CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCccccc
Confidence 999999999997542 2689999999999999999999986 9999999999999999 79999999999986
Q ss_pred hhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHH
Q 003278 268 LEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347 (834)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~ 347 (834)
..... ........+.||+.|||||++..+.....++|||||||+++||+||++||... ....
T Consensus 168 ~~~~~-------------~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-----~~~~ 229 (313)
T KOG0198|consen 168 LESKG-------------TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-----FEEA 229 (313)
T ss_pred ccccc-------------ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-----cchH
Confidence 54210 00111345679999999999986534445899999999999999999998642 1122
Q ss_pred HHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHh
Q 003278 348 DWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAV 405 (834)
Q Consensus 348 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l 405 (834)
.++.....+.....+.+. + .....++...|++.||..|||+.++++..
T Consensus 230 ~~~~~ig~~~~~P~ip~~-l---------s~~a~~Fl~~C~~~~p~~Rpta~eLL~hp 277 (313)
T KOG0198|consen 230 EALLLIGREDSLPEIPDS-L---------SDEAKDFLRKCFKRDPEKRPTAEELLEHP 277 (313)
T ss_pred HHHHHHhccCCCCCCCcc-c---------CHHHHHHHHHHhhcCcccCcCHHHHhhCh
Confidence 233333222222211111 1 13456778899999999999999998753
No 24
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-41 Score=360.27 Aligned_cols=259 Identities=23% Similarity=0.313 Sum_probs=204.9
Q ss_pred CCcccccCCcEEEEEEECCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEeccCCCch
Q 003278 518 SQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRIL 597 (834)
Q Consensus 518 ~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~~g~L 597 (834)
.++||+|-||.|..+..+++..||||.++...+...+.+|.+||++|++|+|||||+|+|+|..++.+++|+|||++|+|
T Consensus 543 ~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnGDL 622 (807)
T KOG1094|consen 543 KEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENGDL 622 (807)
T ss_pred hhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcCcH
Confidence 46899999999999999999999999999888888889999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCCCCc
Q 003278 598 SHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHR 677 (834)
Q Consensus 598 ~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~~~~ 677 (834)
.++|..+..+. ++-..-++|+.|||.||+||.+ -.+|||||.+.|+|+|.++++||+|||+++.+-..++...
T Consensus 623 nqFl~aheapt----~~t~~~vsi~tqiasgmaYLes---~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~v 695 (807)
T KOG1094|consen 623 NQFLSAHELPT----AETAPGVSICTQIASGMAYLES---LNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRV 695 (807)
T ss_pred HHHHHhccCcc----cccchhHHHHHHHHHHHHHHHh---hchhhccccccceeecCcccEEecCcccccccccCCceee
Confidence 99998764321 3344557799999999999986 5899999999999999999999999999997655443211
Q ss_pred ccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh--CCCccCCCCCchhHHHHHHHHHhhcCcccccccc
Q 003278 678 KATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT--GQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDL 755 (834)
Q Consensus 678 ~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t--G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 755 (834)
....+=...|||||.+..+++|++||||+|||+|||+++ .+.|+.... +.........+...... ...+
T Consensus 696 -----qgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt-~e~vven~~~~~~~~~~-~~~l-- 766 (807)
T KOG1094|consen 696 -----QGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLT-DEQVVENAGEFFRDQGR-QVVL-- 766 (807)
T ss_pred -----ecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhh-HHHHHHhhhhhcCCCCc-ceec--
Confidence 011223467999999999999999999999999999876 567775332 22333333332221111 1111
Q ss_pred ccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHcc
Q 003278 756 SLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDG 796 (834)
Q Consensus 756 ~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~ 796 (834)
. ....++ ..+.+++++||..|-++||||+++...|+.
T Consensus 767 ~-~P~~cp---~~lyelml~Cw~~es~~RPsFe~lh~~lq~ 803 (807)
T KOG1094|consen 767 S-RPPACP---QGLYELMLRCWRRESEQRPSFEQLHLFLQE 803 (807)
T ss_pred c-CCCcCc---HHHHHHHHHHhchhhhcCCCHHHHHHHHHH
Confidence 0 111222 345688899999999999999999988864
No 25
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=4.4e-41 Score=371.26 Aligned_cols=263 Identities=22% Similarity=0.319 Sum_probs=200.7
Q ss_pred hCcCcCCcccccCCcEEEEEEE------CCCcEEEEEEecCCCChhHHHHHHHHHHHHHhc-cCCCceeEEEEEeeC-Ce
Q 003278 513 NNFSESQRVAEMDFGTAYQGFL------DNHQYVLVKRLGMSKCPALRTRFSNELQNLARL-RHRNLVQLCGWCTEQ-GE 584 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l-~HpNiv~l~g~~~~~-~~ 584 (834)
++|...+.||+|+||.||+|.. .++..||||++...........|.+|+.+|.++ +|||||+++|+|... +.
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (338)
T cd05102 7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGP 86 (338)
T ss_pred hHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCc
Confidence 4677778899999999999974 224679999987554444556799999999999 899999999988764 46
Q ss_pred EEEEEeccCCCchhhhhhcCCCCC--------------------------------------------------------
Q 003278 585 MLVIYDYSATRILSHLLFHNNHRI-------------------------------------------------------- 608 (834)
Q Consensus 585 ~~lv~Ey~~~g~L~~~l~~~~~~~-------------------------------------------------------- 608 (834)
.++||||+++|+|.+++.......
T Consensus 87 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (338)
T cd05102 87 LMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDL 166 (338)
T ss_pred eEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcccc
Confidence 889999999999999987532100
Q ss_pred CCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCCCCcccccCcccccc
Q 003278 609 GHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRG 688 (834)
Q Consensus 609 ~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~G 688 (834)
....+++...+.++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++.+..... ........|
T Consensus 167 ~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~-----~~~~~~~~~ 238 (338)
T cd05102 167 WKSPLTMEDLICYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-----YVRKGSARL 238 (338)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCccceEEEcCCCcEEEeecccccccccCcc-----hhcccCCCC
Confidence 01247888899999999999999996 6999999999999999999999999999986533211 011223456
Q ss_pred ccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcCccccccccccCCCCCHHHHH
Q 003278 689 IFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNHKELM 767 (834)
Q Consensus 689 t~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 767 (834)
|+.|||||++.+..++.++|||||||+||||+| |..||........+...... ... ....... . .
T Consensus 239 ~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~---~~~-------~~~~~~~-~---~ 304 (338)
T cd05102 239 PLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKD---GTR-------MRAPENA-T---P 304 (338)
T ss_pred CccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhc---CCC-------CCCCCCC-C---H
Confidence 788999999999999999999999999999997 99898653332222221111 000 0011111 1 2
Q ss_pred HHHHHHHHhccCCCCCCCChhHHHHHHccC
Q 003278 768 RLIKLGIACTLSNPELRPSMRQILSILDGN 797 (834)
Q Consensus 768 ~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~ 797 (834)
.+.+++.+||+.||++||||.+|++.|+..
T Consensus 305 ~l~~li~~cl~~dp~~RPs~~el~~~l~~~ 334 (338)
T cd05102 305 EIYRIMLACWQGDPKERPTFSALVEILGDL 334 (338)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 455677799999999999999999999754
No 26
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.6e-42 Score=355.18 Aligned_cols=250 Identities=22% Similarity=0.299 Sum_probs=190.6
Q ss_pred cCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCCChh----H--HHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEE
Q 003278 515 FSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPA----L--RTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLV 587 (834)
Q Consensus 515 f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~----~--~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~l 587 (834)
|--.+.+|+|+||.|-+|.- .+|+.||||+++...... . .....+|+++|++|+|||||++++++.+.+..|+
T Consensus 174 yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~Ym 253 (475)
T KOG0615|consen 174 YIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSYM 253 (475)
T ss_pred eEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceEE
Confidence 34467899999999999984 668999999997543211 1 1224689999999999999999999999999999
Q ss_pred EEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCC---CCceEeeee
Q 003278 588 IYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPD---MNPRLGSFA 664 (834)
Q Consensus 588 v~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~---~~~ki~DfG 664 (834)
||||+.+|.|.+.+..++. +....---++.|++.|+.|||+ .||+||||||+||||..+ ..+||+|||
T Consensus 254 VlE~v~GGeLfd~vv~nk~------l~ed~~K~~f~Qll~avkYLH~---~GI~HRDiKPeNILl~~~~e~~llKItDFG 324 (475)
T KOG0615|consen 254 VLEYVEGGELFDKVVANKY------LREDLGKLLFKQLLTAVKYLHS---QGIIHRDIKPENILLSNDAEDCLLKITDFG 324 (475)
T ss_pred EEEEecCccHHHHHHhccc------cccchhHHHHHHHHHHHHHHHH---cCcccccCCcceEEeccCCcceEEEecccc
Confidence 9999999999999876543 3333334589999999999997 699999999999999866 778999999
Q ss_pred eccccccCCCCCcccccCccccccccCccchhccccCCC--C-ccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHH
Q 003278 665 LAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEA--T-SMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHE 741 (834)
Q Consensus 665 la~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~--~-~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~ 741 (834)
+|++... .+...+.|||+.|.|||++.++.+ + .|+|+||+|||||-++||-.||.....+..+.+.+..
T Consensus 325 lAK~~g~--------~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~ 396 (475)
T KOG0615|consen 325 LAKVSGE--------GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILK 396 (475)
T ss_pred hhhcccc--------ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhc
Confidence 9997542 223457899999999999976543 3 4789999999999999999999865544333333322
Q ss_pred HHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 742 FEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 742 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
.... +.... ..+--.+...++-+.+.-||++|||+.|+++
T Consensus 397 G~y~---f~p~~--------w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 397 GRYA---FGPLQ--------WDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred Cccc---ccChh--------hhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 2111 11111 1111123344455889999999999999875
No 27
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-41 Score=395.66 Aligned_cols=261 Identities=25% Similarity=0.348 Sum_probs=205.4
Q ss_pred CCcccccCCcEEEEEEECC--C----cEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEec
Q 003278 518 SQRVAEMDFGTAYQGFLDN--H----QYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY 591 (834)
Q Consensus 518 ~~~ig~g~~g~vy~~~~~~--~----~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey 591 (834)
.+.||+|.||.||+|.+.+ + ..||||.+......+...+|.+|+.+|++++|||||+++|.|.+....+|++||
T Consensus 697 ~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~ley 776 (1025)
T KOG1095|consen 697 LRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLEY 776 (1025)
T ss_pred eeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEehh
Confidence 4679999999999999754 3 248999998877778888999999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCC-CCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccc
Q 003278 592 SATRILSHLLFHNN-HRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLT 670 (834)
Q Consensus 592 ~~~g~L~~~l~~~~-~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~ 670 (834)
|.+|+|..+|++.. .......|.-...+.++.|||+|+.||++ +..|||||.++|+||+....+||+|||+|+-+.
T Consensus 777 M~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~---~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy 853 (1025)
T KOG1095|consen 777 MEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES---KHFVHRDLAARNCLLDERRVVKIADFGLARDIY 853 (1025)
T ss_pred cccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh---CCCcCcchhhhheeecccCcEEEcccchhHhhh
Confidence 99999999998763 22223458888899999999999999996 789999999999999999999999999999654
Q ss_pred cCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcCcc
Q 003278 671 RNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRPL 749 (834)
Q Consensus 671 ~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 749 (834)
..+.. +..... .=...|||||.+..+.+|.|+|||||||+|||++| |..|+... .+..++..+.+. .+
T Consensus 854 ~~~yy-r~~~~a----~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~-~n~~v~~~~~~g---gR-- 922 (1025)
T KOG1095|consen 854 DKDYY-RKHGEA----MLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSR-SNFEVLLDVLEG---GR-- 922 (1025)
T ss_pred hchhe-eccCcc----ccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCc-chHHHHHHHHhC---Cc--
Confidence 44321 111100 11246999999999999999999999999999999 55555433 333332222111 11
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccCCccc
Q 003278 750 AELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGNDKRF 801 (834)
Q Consensus 750 ~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~~~~~ 801 (834)
++ ...++++. +.+||.+||..+|++||+|..|++.+..+...+
T Consensus 923 ---L~---~P~~CP~~---ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~ 965 (1025)
T KOG1095|consen 923 ---LD---PPSYCPEK---LYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAA 965 (1025)
T ss_pred ---cC---CCCCCChH---HHHHHHHHccCChhhCccHHHHHhhhhhhhhhh
Confidence 11 13455544 457778999999999999999999887665533
No 28
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=7.7e-41 Score=369.31 Aligned_cols=266 Identities=27% Similarity=0.418 Sum_probs=203.1
Q ss_pred hcCCCCCCCeeeccCCeEEEEEEEC-----CCCeEEEEEEecccC-hhhHHHHHHHHHHHHhC-CCCceeeEeeeEEeCC
Q 003278 109 GSNGFDEDEVLGSGGFGKVYRAVLP-----SDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHL-RHRNLVRLRGWCVHED 181 (834)
Q Consensus 109 ~t~~f~~~~~LG~G~fG~Vy~~~~~-----~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~ 181 (834)
..++|...++||+|+||.||+|.+. .+++.||||++.... ....+.+.+|+.++.++ +|||||+++|+|...+
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 4567899999999999999999752 345789999986532 33456789999999999 8999999999988654
Q ss_pred -EEEEEEEccCCCCHhHHHhcCCCcc------------------------------------------------------
Q 003278 182 -QLLLVYDYMPNRSLDRVLFRRPENL------------------------------------------------------ 206 (834)
Q Consensus 182 -~~~lV~Ey~~~gsL~~~l~~~~~~~------------------------------------------------------ 206 (834)
.+++||||+++|+|.+++.......
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 5899999999999999987532100
Q ss_pred -ccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhhhhhhhcccccccc
Q 003278 207 -EAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQ 285 (834)
Q Consensus 207 -~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~ 285 (834)
....++++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.+......
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~----------- 230 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY----------- 230 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcch-----------
Confidence 0024588999999999999999999985 9999999999999999999999999999854322110
Q ss_pred cccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCccchHHHHHHHHhhcCccccccc
Q 003278 286 FHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQIILLDWIRRLSDEGKVLQAGD 364 (834)
Q Consensus 286 ~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 364 (834)
.......||+.|+|||++... .++.++|||||||+||||+| |+.||....... .+ ... ...+...
T Consensus 231 ---~~~~~~~~~~~y~aPE~~~~~-~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~--~~---~~~-~~~~~~~---- 296 (338)
T cd05102 231 ---VRKGSARLPLKWMAPESIFDK-VYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE--EF---CQR-LKDGTRM---- 296 (338)
T ss_pred ---hcccCCCCCccccCcHHhhcC-CCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH--HH---HHH-HhcCCCC----
Confidence 012233467899999988654 67999999999999999997 999986533221 11 111 1122111
Q ss_pred cccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcC
Q 003278 365 NRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGS 408 (834)
Q Consensus 365 ~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~ 408 (834)
+.. .. ....+.+|+..||+.||.+||+|.+|++.|+..
T Consensus 297 -~~~-~~----~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~ 334 (338)
T cd05102 297 -RAP-EN----ATPEIYRIMLACWQGDPKERPTFSALVEILGDL 334 (338)
T ss_pred -CCC-CC----CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 111 11 124578999999999999999999999999764
No 29
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-41 Score=373.59 Aligned_cols=254 Identities=20% Similarity=0.271 Sum_probs=200.2
Q ss_pred CcccccCCcEEEEEEECC--C---cEEEEEEecC--CCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEec
Q 003278 519 QRVAEMDFGTAYQGFLDN--H---QYVLVKRLGM--SKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY 591 (834)
Q Consensus 519 ~~ig~g~~g~vy~~~~~~--~---~~vavK~~~~--~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey 591 (834)
++||+|.||.||+|.+.. + ..||||..+. ........+|.+|+++|++++|||||+|||++....+++||||+
T Consensus 163 kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmEl 242 (474)
T KOG0194|consen 163 KKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVMEL 242 (474)
T ss_pred ceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEEe
Confidence 789999999999999743 2 2389998875 34456678999999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccccc
Q 003278 592 SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTR 671 (834)
Q Consensus 592 ~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~ 671 (834)
|.||+|.++|..... .++..++++++.++|+||+|||+ +++|||||.++|+|++.++.+||+||||++....
T Consensus 243 ~~gGsL~~~L~k~~~-----~v~~~ek~~~~~~AA~Gl~YLh~---k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~ 314 (474)
T KOG0194|consen 243 CNGGSLDDYLKKNKK-----SLPTLEKLRFCYDAARGLEYLHS---KNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQ 314 (474)
T ss_pred cCCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHhHHHHHHH---CCCcchhHhHHHheecCCCeEEeCccccccCCcc
Confidence 999999999987643 48899999999999999999996 7999999999999999999999999999976431
Q ss_pred CCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHH-HHHHhhcCcc
Q 003278 672 NDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRV-HEFEARKRPL 749 (834)
Q Consensus 672 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~-~~~~~~~~~~ 749 (834)
-. .. .....=...|+|||.+..+.|+.++|||||||++||+.+ |..|+...... .+...+ ........
T Consensus 315 ~~-----~~--~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~-~v~~kI~~~~~r~~~-- 384 (474)
T KOG0194|consen 315 YV-----MK--KFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY-EVKAKIVKNGYRMPI-- 384 (474)
T ss_pred ee-----ec--cccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH-HHHHHHHhcCccCCC--
Confidence 10 00 001122357999999999999999999999999999998 78877543322 222222 11111100
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccCCcccc
Q 003278 750 AELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGNDKRFM 802 (834)
Q Consensus 750 ~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~~~~~~ 802 (834)
....++++..++ .+||..+|++||||.+|.+.|+.+.+...
T Consensus 385 ---------~~~~p~~~~~~~---~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 385 ---------PSKTPKELAKVM---KQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred ---------CCCCHHHHHHHH---HHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 113345555444 48999999999999999999987766544
No 30
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.2e-40 Score=385.61 Aligned_cols=498 Identities=18% Similarity=0.236 Sum_probs=309.4
Q ss_pred HHHHHHHHHhCCCCceeeEeeeEEeCCEE----EEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHH
Q 003278 155 FAAELVAVAHLRHRNLVRLRGWCVHEDQL----LLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHY 230 (834)
Q Consensus 155 ~~~E~~~l~~l~H~nIv~l~g~~~~~~~~----~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~y 230 (834)
...|...+.++.|+|++.+++|-...... .+..|+++.-++...+.. ...++..+.+.+..++.+||.|
T Consensus 229 ~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~-------v~~i~~~~~r~~~~~~~~GL~~ 301 (1351)
T KOG1035|consen 229 TEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQS-------VGSIPLETLRILHQKLLEGLAY 301 (1351)
T ss_pred HHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhh-------ccccCHHHHHHHHHHHhhhHHH
Confidence 34577788899999999999987765432 234578888888777753 2467778888999999999999
Q ss_pred HHhccCCCeecCCCCCC---ceEECCCCceEEe--eccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccc
Q 003278 231 LHEQLETQIIHRDVKTS---NVMLDSQYNARLG--DFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPES 305 (834)
Q Consensus 231 LH~~~~~~iiHrDlKp~---NILld~~~~~kl~--DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~ 305 (834)
+|+. ...|.-+-.+ +-..+.++....+ ||+.++.+...... -...-+..|.|||.
T Consensus 302 ~h~~---~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~-----------------~~~~~~~~~~~~e~ 361 (1351)
T KOG1035|consen 302 LHSL---SLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKS-----------------FSDLLAEIRNADED 361 (1351)
T ss_pred HHHh---ccceeEEecccccccccCccceeecchhhhcccccCCCcccc-----------------hhhcCccccccccc
Confidence 9985 4444444333 3334445555555 78776654322110 01112345677776
Q ss_pred cccCC-CCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHH
Q 003278 306 FQKGS-VATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLA 384 (834)
Q Consensus 306 ~~~~~-~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~ 384 (834)
..... ......|+|.+|..+..+..|..+...... .....+. ... ..+....
T Consensus 362 ~~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~~~~------------------~~~~l~~-----~~~----~~~~d~~ 414 (1351)
T KOG1035|consen 362 LKENTAKKSRLTDLWCLGLLLLQLSQGEDISEKSAV------------------PVSLLDV-----LST----SELLDAL 414 (1351)
T ss_pred cccccchhhhhhHHHHHHHHHhhhhhcCcccccccc------------------hhhhhcc-----ccc----hhhhhhh
Confidence 64331 122336999999999999988654322100 0000000 000 0244556
Q ss_pred HHhcccCCCCCCchhhHHHHhhcCCCCCCCCCCCccCCCcccccCCCCCCCCCCCccccccCcccCCCcccCCCCCcccc
Q 003278 385 LLCTLHNPHLRPSMKWVIEAVSGSYSGKLPALPSFQSHPLYISLSSPTNTSTSNTETTRSTNTTASNTTIASPSSNYVTA 464 (834)
Q Consensus 385 ~~Cl~~~p~~RPsm~~V~~~l~~~~~~~~p~~ps~~s~p~~~s~ssp~~~s~s~~~~s~ss~ss~s~~~~~spssn~v~a 464 (834)
..|+..++++|++..+++...........+..+ + ++. ......+. -.+..+
T Consensus 415 ~~~~~~~~~~Rl~~~~ll~~~f~~~~~~~~~~~-------~----~~~------~~~~~~~~--------~~r~~~---- 465 (1351)
T KOG1035|consen 415 PKCLDEDSEERLSALELLTHPFLRFPTDNESSE-------F----APN------DETSVPQF--------RLRFSG---- 465 (1351)
T ss_pred hhhcchhhhhccchhhhhhchhccccccccccc-------c----cCc------cccccCcc--------CCCCcc----
Confidence 689999999999999888754321110000000 0 000 00000000 000000
Q ss_pred cccccccccccCCCcCCCCCCccccccCcccccCCCccccHHHHHHHhhCcCcCCcccccCCcEEEEEEE-CCCcEEEEE
Q 003278 465 AGETIYATAECGGNTESKSNNSRSQRRNSFFMVETPREISFKEIISATNNFSESQRVAEMDFGTAYQGFL-DNHQYVLVK 543 (834)
Q Consensus 465 ~~~~~~a~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~at~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK 543 (834)
+.....+.+ .+--++|.+...+|+||||.||+++. =||+.+|||
T Consensus 466 ------------------------------~~s~~~r~~-----SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIK 510 (1351)
T KOG1035|consen 466 ------------------------------AMSPLQRQF-----SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIK 510 (1351)
T ss_pred ------------------------------ccCccccch-----hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhh
Confidence 000000001 11224667778899999999999984 478899999
Q ss_pred EecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEee------------------------------------------
Q 003278 544 RLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTE------------------------------------------ 581 (834)
Q Consensus 544 ~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~------------------------------------------ 581 (834)
++........-....+|+.+|++|+|||||+++..+.+
T Consensus 511 KIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~ 590 (1351)
T KOG1035|consen 511 KIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTL 590 (1351)
T ss_pred hccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccccccchhhhcccCCCcccceeeeccCCCcccCc
Confidence 99876544444567889999999999999999865400
Q ss_pred ---------------------------------------------------------------------C--------Ce
Q 003278 582 ---------------------------------------------------------------------Q--------GE 584 (834)
Q Consensus 582 ---------------------------------------------------------------------~--------~~ 584 (834)
. -.
T Consensus 591 ~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~ 670 (1351)
T KOG1035|consen 591 SELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLI 670 (1351)
T ss_pred chhhccccCccccccccccccccccCCcccccccccccccccccccCCccccCcchhhhhhccccCCccccccccccceE
Confidence 0 12
Q ss_pred EEEEEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeee
Q 003278 585 MLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFA 664 (834)
Q Consensus 585 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfG 664 (834)
+||-||||+..+|.+++..+.... .-....+++++|++||+|+|+ .+||||||||.||+||++..+||+|||
T Consensus 671 LYIQMEyCE~~ll~~iI~~N~~~~-----~~d~~wrLFreIlEGLaYIH~---~giIHRDLKP~NIFLd~~~~VKIGDFG 742 (1351)
T KOG1035|consen 671 LYIQMEYCEKTLLRDIIRRNHFNS-----QRDEAWRLFREILEGLAYIHD---QGIIHRDLKPRNIFLDSRNSVKIGDFG 742 (1351)
T ss_pred EEEEHhhhhhhHHHHHHHhcccch-----hhHHHHHHHHHHHHHHHHHHh---CceeeccCCcceeEEcCCCCeeecccc
Confidence 477899999988888876654321 112234689999999999997 689999999999999999999999999
Q ss_pred eccccc----cC-------CCCCcccccCccccccccCccchhccccC---CCCccCcchhhHHHHHHHHhCCCccCCCC
Q 003278 665 LAEFLT----RN-------DHGHRKATSGNRSVRGIFGYMSPEYIESG---EATSMADVYSFGVVVLEVVTGQMAVDFRL 730 (834)
Q Consensus 665 la~~~~----~~-------~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~---~~~~k~DV~SfGvvl~E~~tG~~p~~~~~ 730 (834)
+|+... .. ...........++..||.-|+|||.+.+. .|+.|+|+||+||||+||+- ||...+
T Consensus 743 LAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsM 819 (1351)
T KOG1035|consen 743 LATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSM 819 (1351)
T ss_pred cchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchH
Confidence 998732 00 00011122234567899999999999654 49999999999999999974 554433
Q ss_pred CchhHHHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 731 PEGLLVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
.....+..+. ...+..- ..+..++...=.+++.+.++.||.+|||+.|+++
T Consensus 820 ERa~iL~~LR-----~g~iP~~------~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 820 ERASILTNLR-----KGSIPEP------ADFFDPEHPEEASLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred HHHHHHHhcc-----cCCCCCC------cccccccchHHHHHHHHHhcCCCccCCCHHHHhh
Confidence 2222222111 1111111 1111122222234445778899999999999885
No 31
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-42 Score=363.71 Aligned_cols=265 Identities=23% Similarity=0.338 Sum_probs=209.1
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHH-HHHHHHHHHHhCC-CCceeeEeeeEEeCC-EEEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEK-TFAAELVAVAHLR-HRNLVRLRGWCVHED-QLLLVY 187 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~-~~~~E~~~l~~l~-H~nIv~l~g~~~~~~-~~~lV~ 187 (834)
++|...++||.|.||.||+|+...+|..||||+++++.....+ .=++|+..|++|+ |||||+|...+.+.+ .+++||
T Consensus 10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVf 89 (538)
T KOG0661|consen 10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVF 89 (538)
T ss_pred HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeH
Confidence 5677889999999999999999999999999999876444333 2368999999999 999999999999988 999999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhh
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARW 267 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 267 (834)
|||. .+|.+++..+ ..++++..++.|+.||++||+|+|.+ |+.|||+||+|||+..+..+||+||||||.
T Consensus 90 E~Md-~NLYqLmK~R------~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARe 159 (538)
T KOG0661|consen 90 EFMD-CNLYQLMKDR------NRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLARE 159 (538)
T ss_pred Hhhh-hhHHHHHhhc------CCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEecccccccc
Confidence 9995 6999999766 25799999999999999999999996 999999999999999888999999999997
Q ss_pred hhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHH
Q 003278 268 LEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347 (834)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~ 347 (834)
+.+... -|..+.|.+|.|||++.....|+.+.|+||+|||++|+.+-++-|....+-++..-+
T Consensus 160 v~SkpP-----------------YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KI 222 (538)
T KOG0661|consen 160 VRSKPP-----------------YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKI 222 (538)
T ss_pred cccCCC-----------------cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHH
Confidence 654322 366778999999999988889999999999999999999999888765444433211
Q ss_pred ----------HHHH--HHhhc--CccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 348 ----------DWIR--RLSDE--GKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 348 ----------~~~~--~~~~~--~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
.|.. .+... -...+.....+.. -.+. .....+.|+..|+..||.+||++.+.++.
T Consensus 223 c~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~-L~p~-~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 223 CEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKD-LLPN-ASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HHHhCCCccccchhHHHHHHHhccCCCcCCCCChHH-hCcc-cCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 1111 00000 0011111111110 0111 23567889999999999999999998875
No 32
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.6e-41 Score=357.11 Aligned_cols=267 Identities=25% Similarity=0.360 Sum_probs=202.9
Q ss_pred cCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc--ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeC--CEEEE
Q 003278 110 SNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK--GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHE--DQLLL 185 (834)
Q Consensus 110 t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~--~~~~l 185 (834)
.+.|+..++||+|.||.||||+...+|+.||+|++... .+.+.....+||.+|++|+|||||+|.+...+. ..+||
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 35688889999999999999999999999999987654 355677788999999999999999999998887 68999
Q ss_pred EEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccch
Q 003278 186 VYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLA 265 (834)
Q Consensus 186 V~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 265 (834)
|+|||+. +|.-++... ...++..+++.++.|++.||+|||++ +|+|||||.+|||||.+|.+||+|||||
T Consensus 196 VFeYMdh-DL~GLl~~p------~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLA 265 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSSP------GVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLA 265 (560)
T ss_pred EEecccc-hhhhhhcCC------CcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccce
Confidence 9999976 777777532 35689999999999999999999996 9999999999999999999999999999
Q ss_pred hhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccch
Q 003278 266 RWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII 345 (834)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~ 345 (834)
++...+.. ..-|..+-|.+|.|||.+.....|+..+|+||.||||.||++|++.+.....-++
T Consensus 266 r~y~~~~~---------------~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQ-- 328 (560)
T KOG0600|consen 266 RFYTPSGS---------------APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQ-- 328 (560)
T ss_pred eeccCCCC---------------cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHH--
Confidence 97643311 1134455799999999998888899999999999999999999988765432222
Q ss_pred HHHHHHHHhhcCc-----cccccccccC--CCCCCHHH-------HHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 346 LLDWIRRLSDEGK-----VLQAGDNRLS--DGSYKLCD-------MEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 346 l~~~~~~~~~~~~-----~~~~~d~~l~--~~~~~~~~-------~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
+.-+.++..... +......... ...+...- ....+.|...-|..||++|.|+.++++.
T Consensus 329 -l~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 329 -LHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred -HHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 222222221110 0000000000 00111100 1234556666677899999999988753
No 33
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=4.1e-40 Score=354.16 Aligned_cols=260 Identities=20% Similarity=0.300 Sum_probs=201.0
Q ss_pred CccccHHHHHHHhhCcCcCCcccccCCcEEEEEEECCCcEEEEEEecCCCC--hhHHHHHHHHHHHHHhccCCCceeEEE
Q 003278 500 PREISFKEIISATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKC--PALRTRFSNELQNLARLRHRNLVQLCG 577 (834)
Q Consensus 500 ~~~~~~~el~~at~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~--~~~~~~f~~E~~~l~~l~HpNiv~l~g 577 (834)
.+.++.+++ ++.....||+|++|.||+|.+ ++..||||.+..... ....+.|.+|+.+|.+++|||||+++|
T Consensus 12 ~~~i~~~~i-----~~~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g 85 (283)
T PHA02988 12 IKCIESDDI-----DKYTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYG 85 (283)
T ss_pred ceecCHHHc-----CCCCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEee
Confidence 344566665 333446799999999999998 567899999875432 223467889999999999999999999
Q ss_pred EEee----CCeEEEEEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeec
Q 003278 578 WCTE----QGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLD 653 (834)
Q Consensus 578 ~~~~----~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld 653 (834)
++.+ ....++||||+++|+|.+++.... .++|..+++++.|++.||.|||+. .+++||||||+|||++
T Consensus 86 ~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~------~~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~nill~ 157 (283)
T PHA02988 86 FIIDIVDDLPRLSLILEYCTRGYLREVLDKEK------DLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLTSVSFLVT 157 (283)
T ss_pred eEEecccCCCceEEEEEeCCCCcHHHHHhhCC------CCChhHHHHHHHHHHHHHHHHHhc--CCCCCCcCChhhEEEC
Confidence 9877 356899999999999999986532 478999999999999999999963 4788999999999999
Q ss_pred CCCCceEeeeeeccccccCCCCCcccccCccccccccCccchhcccc--CCCCccCcchhhHHHHHHHHhCCCccCCCCC
Q 003278 654 PDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIES--GEATSMADVYSFGVVVLEVVTGQMAVDFRLP 731 (834)
Q Consensus 654 ~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~--~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~ 731 (834)
+++.+||+|||+++.+... .....||..|||||++.+ ..++.++|||||||++|||+||+.||....+
T Consensus 158 ~~~~~kl~dfg~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~ 227 (283)
T PHA02988 158 ENYKLKIICHGLEKILSSP----------PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT 227 (283)
T ss_pred CCCcEEEcccchHhhhccc----------cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH
Confidence 9999999999999764321 113468899999999976 6899999999999999999999999975433
Q ss_pred chhHHHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccC
Q 003278 732 EGLLVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGN 797 (834)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~ 797 (834)
.. +...+.. .... +.++.. .+.+ +.+++.+||+.||++||||.+|++.|+-.
T Consensus 228 ~~-~~~~i~~---~~~~------~~~~~~-~~~~---l~~li~~cl~~dp~~Rps~~ell~~l~~~ 279 (283)
T PHA02988 228 KE-IYDLIIN---KNNS------LKLPLD-CPLE---IKCIVEACTSHDSIKRPNIKEILYNLSLY 279 (283)
T ss_pred HH-HHHHHHh---cCCC------CCCCCc-CcHH---HHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence 22 2221111 1010 011111 2233 44556699999999999999999998654
No 34
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-40 Score=357.92 Aligned_cols=266 Identities=23% Similarity=0.348 Sum_probs=208.8
Q ss_pred HhhcCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC---hhhHHHHHHHHHHHHhC-CCCceeeEeeeEEeCCE
Q 003278 107 YIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAELVAVAHL-RHRNLVRLRGWCVHEDQ 182 (834)
Q Consensus 107 ~~~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~~ 182 (834)
....++|...+.||+|+|++||+|+.+.+++.||||++.+.. +...+-...|-.+|.+| .||.||+||-.|.+...
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 445578999999999999999999999999999999987642 22234456788899999 89999999999999999
Q ss_pred EEEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeec
Q 003278 183 LLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDF 262 (834)
Q Consensus 183 ~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 262 (834)
+|+|+||++||+|.++|.+. +.|+......++.+|+.||+|||+. |||||||||+|||||+|+++||+||
T Consensus 149 LYFvLe~A~nGdll~~i~K~-------Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDF 218 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKY-------GSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDF 218 (604)
T ss_pred eEEEEEecCCCcHHHHHHHh-------CcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeec
Confidence 99999999999999999754 5688888899999999999999996 9999999999999999999999999
Q ss_pred cchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCc
Q 003278 263 GLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDD 342 (834)
Q Consensus 263 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~ 342 (834)
|.|+.+.......-.+... .......++++||..|++||.+..+ ..+..+|+|+|||+||.|+.|++||....+
T Consensus 219 GsAK~l~~~~~~~~~~~~~---~~a~s~~~SFVGTAeYVSPElL~~~-~~~~~sDiWAlGCilyQmlaG~PPFra~Ne-- 292 (604)
T KOG0592|consen 219 GSAKILSPSQKSQENPVDP---NQASSRRSSFVGTAEYVSPELLNDS-PAGPSSDLWALGCILYQMLAGQPPFRAANE-- 292 (604)
T ss_pred cccccCChhhccccCccCc---ccccCcccceeeeecccCHHHhcCC-CCCcccchHHHHHHHHHHhcCCCCCccccH--
Confidence 9999886543211100000 0011113679999999999999765 678999999999999999999999975321
Q ss_pred cchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 343 QIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 343 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
-.+..-+.. +|-... ..++ +.+.+|+..-|..||.+|++..++-+.
T Consensus 293 -yliFqkI~~----------l~y~fp-~~fp----~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 293 -YLIFQKIQA----------LDYEFP-EGFP----EDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred -HHHHHHHHH----------hcccCC-CCCC----HHHHHHHHHHHccCccccccHHHHhhC
Confidence 112221111 111222 1222 346677888889999999999887664
No 35
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-41 Score=353.94 Aligned_cols=253 Identities=25% Similarity=0.419 Sum_probs=194.8
Q ss_pred CcCcCCcccccCCcEEEEEEECC-CcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCC--eEEEEEe
Q 003278 514 NFSESQRVAEMDFGTAYQGFLDN-HQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQG--EMLVIYD 590 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~--~~~lv~E 590 (834)
++...+.||+|+||+||.+...+ |...|||.+.....+. .+.+.+|+.+|++++|||||+++|...... ..+|+||
T Consensus 18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~-~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPT-SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred hhhhhccccCccceEEEEEEecCCCcceeeeeeecccchh-HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 45667889999999999999754 8899999987664443 567899999999999999999999755444 6899999
Q ss_pred ccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecC-CCCceEeeeeecccc
Q 003278 591 YSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDP-DMNPRLGSFALAEFL 669 (834)
Q Consensus 591 y~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~-~~~~ki~DfGla~~~ 669 (834)
|+++|+|.+++...+. .|+.....+++.||++||+|||+ ++||||||||+||||+. ++.+||+|||+++..
T Consensus 97 y~~~GsL~~~~~~~g~-----~l~E~~v~~ytr~iL~GL~ylHs---~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~ 168 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGG-----KLPEPLVRRYTRQILEGLAYLHS---KGIVHCDIKPANILLDPSNGDVKLADFGLAKKL 168 (313)
T ss_pred ccCCCcHHHHHHHcCC-----CCCHHHHHHHHHHHHHHHHHHHh---CCEeccCcccceEEEeCCCCeEEeccCcccccc
Confidence 9999999999976542 38888899999999999999996 79999999999999999 799999999999865
Q ss_pred ccCCCCCcccccCccccccccCccchhccccCCCC-ccCcchhhHHHHHHHHhCCCccCCC-CCchhHHHHHHHHHhhcC
Q 003278 670 TRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEAT-SMADVYSFGVVVLEVVTGQMAVDFR-LPEGLLVKRVHEFEARKR 747 (834)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~-~k~DV~SfGvvl~E~~tG~~p~~~~-~~~~~~~~~~~~~~~~~~ 747 (834)
.... ........+.||+.|||||++..+... .++|||||||+++||+||+.|+... .+...+.. .. ...
T Consensus 169 ~~~~----~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~---ig--~~~ 239 (313)
T KOG0198|consen 169 ESKG----TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLL---IG--RED 239 (313)
T ss_pred cccc----ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHH---Hh--ccC
Confidence 4310 111223457899999999999865443 4899999999999999999998642 11111111 11 111
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 003278 748 PLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSI 793 (834)
Q Consensus 748 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~ 793 (834)
... .++.. -..++..++. .|+..||++|||+.++++.
T Consensus 240 ~~P-----~ip~~-ls~~a~~Fl~---~C~~~~p~~Rpta~eLL~h 276 (313)
T KOG0198|consen 240 SLP-----EIPDS-LSDEAKDFLR---KCFKRDPEKRPTAEELLEH 276 (313)
T ss_pred CCC-----CCCcc-cCHHHHHHHH---HHhhcCcccCcCHHHHhhC
Confidence 111 12211 2244454444 7999999999999999874
No 36
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-40 Score=348.16 Aligned_cols=263 Identities=20% Similarity=0.315 Sum_probs=205.7
Q ss_pred CcCcCCcccccCCcEEEEEE-ECCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEecc
Q 003278 514 NFSESQRVAEMDFGTAYQGF-LDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYS 592 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~ 592 (834)
.|.-.+.||.|.-++||+|. ...+.+||||+++.+.+....+.+.+|++.|+.++|||||+++..|.....+++||.||
T Consensus 27 ~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfM 106 (516)
T KOG0582|consen 27 DYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFM 106 (516)
T ss_pred ceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhh
Confidence 44555779999999999998 46679999999998888777888999999999999999999999999999999999999
Q ss_pred CCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccC
Q 003278 593 ATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRN 672 (834)
Q Consensus 593 ~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~ 672 (834)
.+|++.+++...=. ..+++.....|.+++++||.|||. .|.||||||+.|||||++|.+||+|||.+-.+...
T Consensus 107 a~GS~ldIik~~~~----~Gl~E~~Ia~iLre~LkaL~YLH~---~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~ 179 (516)
T KOG0582|consen 107 AGGSLLDIIKTYYP----DGLEEASIATILREVLKALDYLHQ---NGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDS 179 (516)
T ss_pred cCCcHHHHHHHHcc----ccccHHHHHHHHHHHHHHHHHHHh---cCceecccccccEEEcCCCcEEEcCceeeeeeccc
Confidence 99999999976422 127888888999999999999997 69999999999999999999999999998877654
Q ss_pred CCCCcccccCccccccccCccchhccc--cCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCccc
Q 003278 673 DHGHRKATSGNRSVRGIFGYMSPEYIE--SGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLA 750 (834)
Q Consensus 673 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~--~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (834)
. .+..... .+++||+.|||||++. ...|+.|+|||||||+..||++|..||....|...++..+.. ....+..
T Consensus 180 G--~R~~~rf-~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn--~pp~~~t 254 (516)
T KOG0582|consen 180 G--DRQVTRF-NTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQN--DPPTLLT 254 (516)
T ss_pred C--ceeeEee-ccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcC--CCCCccc
Confidence 3 2322222 5678999999999954 346999999999999999999999999865554433333221 0001111
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 751 ELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 751 ~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
...|..-...+. + .+-++.-.|++.||++|||++++++
T Consensus 255 ~~~~~d~~k~~~-k---sf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 255 SGLDKDEDKKFS-K---SFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred ccCChHHhhhhc-H---HHHHHHHHHhhcCcccCCCHHHHhc
Confidence 111111111111 2 3344445799999999999999875
No 37
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=5.3e-40 Score=353.30 Aligned_cols=261 Identities=15% Similarity=0.256 Sum_probs=203.3
Q ss_pred CCccccHHHHHhhcCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccCh---hhHHHHHHHHHHHHhCCCCceeeE
Q 003278 97 NPRIFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGE---RFEKTFAAELVAVAHLRHRNLVRL 173 (834)
Q Consensus 97 ~~~~f~~~el~~~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l 173 (834)
+.+.++..++. +.....||+|++|.||+|.+ +|+.||||.+..... ...+.|.+|+.+|.+++|||||++
T Consensus 11 ~~~~i~~~~i~-----~~~~~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~ 83 (283)
T PHA02988 11 DIKCIESDDID-----KYTSVLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKI 83 (283)
T ss_pred cceecCHHHcC-----CCCCeEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 44556666663 33346899999999999998 689999999865422 235678899999999999999999
Q ss_pred eeeEEe----CCEEEEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCce
Q 003278 174 RGWCVH----EDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNV 249 (834)
Q Consensus 174 ~g~~~~----~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NI 249 (834)
+|++.+ ....++||||+++|+|.+++... ..++|.....++.+++.||.|||+. .+++||||||+||
T Consensus 84 ~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~-------~~~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~ni 154 (283)
T PHA02988 84 YGFIIDIVDDLPRLSLILEYCTRGYLREVLDKE-------KDLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLTSVSF 154 (283)
T ss_pred eeeEEecccCCCceEEEEEeCCCCcHHHHHhhC-------CCCChhHHHHHHHHHHHHHHHHHhc--CCCCCCcCChhhE
Confidence 999987 34689999999999999999643 3588999999999999999999974 3788999999999
Q ss_pred EECCCCceEEeeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCcccccc-CCCCCcccceeehhhHHHHH
Q 003278 250 MLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQK-GSVATAKSDVFSFGIVVLEV 328 (834)
Q Consensus 250 Lld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~~~~ksDV~SfGvvl~El 328 (834)
|+++++.+||+|||+++.+... .....||+.|+|||.+.. ...++.++|||||||++|||
T Consensus 155 ll~~~~~~kl~dfg~~~~~~~~-------------------~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el 215 (283)
T PHA02988 155 LVTENYKLKIICHGLEKILSSP-------------------PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEI 215 (283)
T ss_pred EECCCCcEEEcccchHhhhccc-------------------cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHH
Confidence 9999999999999999754211 122358899999999864 24679999999999999999
Q ss_pred HhCCccCCCCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcC
Q 003278 329 VSGRRAVDLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGS 408 (834)
Q Consensus 329 ltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~ 408 (834)
+||+.||...... .+.......+... .+. ......+.+++..||+.||++||+|.+|++.|+..
T Consensus 216 ~~g~~Pf~~~~~~------~~~~~i~~~~~~~-----~~~-----~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~ 279 (283)
T PHA02988 216 FTGKIPFENLTTK------EIYDLIINKNNSL-----KLP-----LDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLY 279 (283)
T ss_pred HHCCCCCCCCCHH------HHHHHHHhcCCCC-----CCC-----CcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence 9999999743211 1111111111111 111 01124688999999999999999999999998754
No 38
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-41 Score=359.12 Aligned_cols=240 Identities=25% Similarity=0.446 Sum_probs=193.8
Q ss_pred CCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEccCCC
Q 003278 114 DEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNR 193 (834)
Q Consensus 114 ~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 193 (834)
.+.+-||+|+-|.||+|++ .++.||||+++.- -..+|+-|++|+|||||.+.|+|.....+|||||||+.|
T Consensus 127 sELeWlGSGaQGAVF~Grl--~netVAVKKV~el-------kETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~G 197 (904)
T KOG4721|consen 127 SELEWLGSGAQGAVFLGRL--HNETVAVKKVREL-------KETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQG 197 (904)
T ss_pred hhhhhhccCcccceeeeec--cCceehhHHHhhh-------hhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccc
Confidence 3457899999999999998 4789999987532 235788899999999999999999999999999999999
Q ss_pred CHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhhh
Q 003278 194 SLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQ 273 (834)
Q Consensus 194 sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~ 273 (834)
-|...|... .+++-.....+..+||.|+.|||.+ .|||||||+-||||..+..+||+|||.++.+....
T Consensus 198 qL~~VLka~-------~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~S- 266 (904)
T KOG4721|consen 198 QLYEVLKAG-------RPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDKS- 266 (904)
T ss_pred cHHHHHhcc-------CccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhhh-
Confidence 999999653 4577778899999999999999986 99999999999999999999999999998754321
Q ss_pred hhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHHHHH
Q 003278 274 YQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIRRL 353 (834)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~~~~ 353 (834)
....++||..|||||++.+. ..+.|+|||||||||||||||..|+..... ..+-|
T Consensus 267 ----------------TkMSFaGTVaWMAPEvIrne-PcsEKVDIwSfGVVLWEmLT~EiPYkdVds----sAIIw---- 321 (904)
T KOG4721|consen 267 ----------------TKMSFAGTVAWMAPEVIRNE-PCSEKVDIWSFGVVLWEMLTGEIPYKDVDS----SAIIW---- 321 (904)
T ss_pred ----------------hhhhhhhhHhhhCHHHhhcC-CcccccceehhHHHHHHHHhcCCCccccch----heeEE----
Confidence 13567899999999999765 679999999999999999999988753211 11111
Q ss_pred hhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhh
Q 003278 354 SDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVS 406 (834)
Q Consensus 354 ~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~ 406 (834)
-+..+.|. -..+....+-+.-|+.+||+..|..||++++++..|.
T Consensus 322 -------GVGsNsL~-LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hld 366 (904)
T KOG4721|consen 322 -------GVGSNSLH-LPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLD 366 (904)
T ss_pred -------eccCCccc-ccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHh
Confidence 11111111 1112223456778899999999999999999998874
No 39
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=3.5e-40 Score=354.90 Aligned_cols=264 Identities=23% Similarity=0.347 Sum_probs=202.4
Q ss_pred HhhcCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC---hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEE
Q 003278 107 YIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQL 183 (834)
Q Consensus 107 ~~~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~ 183 (834)
....++|+...+||+||||+||+|+-+.+|..+|+|++++.. ....+....|-.+|...++|+||+||..|.+.+.+
T Consensus 137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~L 216 (550)
T KOG0605|consen 137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYL 216 (550)
T ss_pred cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCee
Confidence 456789999999999999999999999999999999997652 22345678899999999999999999999999999
Q ss_pred EEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeecc
Q 003278 184 LLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFG 263 (834)
Q Consensus 184 ~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 263 (834)
||||||+|||++..+|.+. ..|+......++.+++.|+.-||.. |+|||||||+|+|||..|++||+|||
T Consensus 217 YLiMEylPGGD~mTLL~~~-------~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFG 286 (550)
T KOG0605|consen 217 YLIMEYLPGGDMMTLLMRK-------DTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFG 286 (550)
T ss_pred EEEEEecCCccHHHHHHhc-------CcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeecccc
Confidence 9999999999999999653 5688889999999999999999986 99999999999999999999999999
Q ss_pred chhhhhhhhhhhh---------hcccccccccc-------c---------------ccceeeeccccCCCccccccCCCC
Q 003278 264 LARWLEHELQYQM---------RTSSARNHQFH-------L---------------AETTRIGGTIGYLPPESFQKGSVA 312 (834)
Q Consensus 264 la~~~~~~~~~~~---------~~~~~~~~~~~-------~---------------~~~~~~~Gt~~Y~aPE~~~~~~~~ 312 (834)
|+.-+........ .........+. . .-.-.++|||.|||||++... .|
T Consensus 287 Ls~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~k-gY 365 (550)
T KOG0605|consen 287 LSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGK-GY 365 (550)
T ss_pred ccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcC-CC
Confidence 9965433111000 00000000000 0 001246799999999999754 57
Q ss_pred CcccceeehhhHHHHHHhCCccCCCCCCCcc-chHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccC
Q 003278 313 TAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQ-IILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHN 391 (834)
Q Consensus 313 ~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~ 391 (834)
+..+|+||+|||+||||.|-+||....+.+. ..++.|-..+. ...+..+ . .+..+|+..|+- |
T Consensus 366 ~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~------fP~~~~~-----s----~eA~DLI~rll~-d 429 (550)
T KOG0605|consen 366 GKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLK------FPEEVDL-----S----DEAKDLITRLLC-D 429 (550)
T ss_pred CccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhcc------CCCcCcc-----c----HHHHHHHHHHhc-C
Confidence 9999999999999999999999986554432 23445543321 1111111 1 345667777776 9
Q ss_pred CCCCCc
Q 003278 392 PHLRPS 397 (834)
Q Consensus 392 p~~RPs 397 (834)
|++|--
T Consensus 430 ~~~RLG 435 (550)
T KOG0605|consen 430 PENRLG 435 (550)
T ss_pred HHHhcC
Confidence 999965
No 40
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.1e-39 Score=354.45 Aligned_cols=266 Identities=20% Similarity=0.272 Sum_probs=199.5
Q ss_pred CcCcCCcccccCCcEEEEEEECC-----------------CcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEE
Q 003278 514 NFSESQRVAEMDFGTAYQGFLDN-----------------HQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLC 576 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~~~-----------------~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~ 576 (834)
.|...++||+|+||.||+|..++ +..||+|.+........+..|.+|+.+|.+++|||||+++
T Consensus 6 ~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~ 85 (304)
T cd05096 6 HLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLL 85 (304)
T ss_pred hCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEE
Confidence 45566789999999999997533 3369999987655555667899999999999999999999
Q ss_pred EEEeeCCeEEEEEeccCCCchhhhhhcCCCC-------------CCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeec
Q 003278 577 GWCTEQGEMLVIYDYSATRILSHLLFHNNHR-------------IGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHR 643 (834)
Q Consensus 577 g~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~-------------~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHr 643 (834)
|++.+.+..++||||+++|+|.+++...... .....++|...+.++.|++.||+|||+ .+|+||
T Consensus 86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~ivH~ 162 (304)
T cd05096 86 GVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS---LNFVHR 162 (304)
T ss_pred EEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH---CCcccc
Confidence 9999999999999999999999988653210 112347888999999999999999997 689999
Q ss_pred ccccCceeecCCCCceEeeeeeccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhC-
Q 003278 644 NITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG- 722 (834)
Q Consensus 644 DlK~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG- 722 (834)
||||+|||+++++.+||+|||+++.+..... ........++..|||||++..+.++.++|||||||++|||+++
T Consensus 163 dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~ 237 (304)
T cd05096 163 DLATRNCLVGENLTIKIADFGMSRNLYAGDY-----YRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLC 237 (304)
T ss_pred CcchhheEEcCCccEEECCCccceecccCce-----eEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHcc
Confidence 9999999999999999999999976533211 0111234567899999999989999999999999999999974
Q ss_pred -CCccCCCCCchhHHHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHc
Q 003278 723 -QMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795 (834)
Q Consensus 723 -~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~ 795 (834)
..|+..... ...................... ....+ ..+.+++.+||+.||++||||.+|.+.|+
T Consensus 238 ~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~---~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 238 KEQPYGELTD-EQVIENAGEFFRDQGRQVYLFR----PPPCP---QGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCCCCCcCCH-HHHHHHHHHHhhhccccccccC----CCCCC---HHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 455543222 2222222221111100000000 01112 24566777999999999999999999885
No 41
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-40 Score=333.23 Aligned_cols=199 Identities=26% Similarity=0.391 Sum_probs=178.9
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC---hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVY 187 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 187 (834)
++|+..+.||.|+||+|.+++.+.+|..+|+|++++.. -+..+...+|..+|+.+.||++|+|++.|.+.+.+||||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 46888999999999999999999999999999997642 233456788999999999999999999999999999999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhh
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARW 267 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 267 (834)
||++||.|.++|++. .+++....+.++.||+.||+|||+. .||+|||||+|||||.+|.+||+|||+|+.
T Consensus 124 eyv~GGElFS~Lrk~-------~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~ 193 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKS-------GRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKR 193 (355)
T ss_pred eccCCccHHHHHHhc-------CCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEE
Confidence 999999999999753 5688889999999999999999995 999999999999999999999999999986
Q ss_pred hhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCC
Q 003278 268 LEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTY 339 (834)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~ 339 (834)
+.. .+.+.||||.|+|||.++.. .+...+|+|||||++|||+.|.+||....
T Consensus 194 v~~-------------------rT~TlCGTPeYLAPEii~sk-~ynkavDWWalGVLIYEMlaG~pPF~~~~ 245 (355)
T KOG0616|consen 194 VSG-------------------RTWTLCGTPEYLAPEIIQSK-GYNKAVDWWALGVLIYEMLAGYPPFYDDN 245 (355)
T ss_pred ecC-------------------cEEEecCCccccChHHhhcC-CCCcchhHHHHHHHHHHHHcCCCCCcCCC
Confidence 432 26789999999999998754 67889999999999999999999997543
No 42
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.5e-39 Score=353.56 Aligned_cols=267 Identities=23% Similarity=0.323 Sum_probs=199.8
Q ss_pred CCCCCCCeeeccCCeEEEEEEECC----------------CCeEEEEEEecccC-hhhHHHHHHHHHHHHhCCCCceeeE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPS----------------DGTVVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLVRL 173 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~----------------~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l 173 (834)
++|...+.||+|+||.||+|.+.. ++..||||.+.... ......|.+|+.++.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 467888999999999999998632 34579999986542 3345679999999999999999999
Q ss_pred eeeEEeCCEEEEEEEccCCCCHhHHHhcCCCc------------cccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeec
Q 003278 174 RGWCVHEDQLLLVYDYMPNRSLDRVLFRRPEN------------LEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIH 241 (834)
Q Consensus 174 ~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~------------~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH 241 (834)
+++|.+.+..++||||+++|+|.+++...... ......++|..+..|+.|++.||.|||+. +|+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NFVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Cccc
Confidence 99999999999999999999999998653211 11124589999999999999999999985 9999
Q ss_pred CCCCCCceEECCCCceEEeeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeeh
Q 003278 242 RDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSF 321 (834)
Q Consensus 242 rDlKp~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~Sf 321 (834)
|||||+|||++.++.+||+|||+++.+..... ........+|+.|||||++..+ .++.++|||||
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~--------------~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~sl 226 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDY--------------YRIQGRAVLPIRWMAWECILMG-KFTTASDVWAF 226 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCce--------------eEecCcCCCCccccCHHHHhcC-CCCchhhhHHH
Confidence 99999999999999999999999975422110 0012233468899999988655 57999999999
Q ss_pred hhHHHHHHhCC--ccCCCCCCCccchHHHHHHHHhhcC-ccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCch
Q 003278 322 GIVVLEVVSGR--RAVDLTYPDDQIILLDWIRRLSDEG-KVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSM 398 (834)
Q Consensus 322 Gvvl~ElltG~--~p~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm 398 (834)
||++|||+++. .|+... .. .....++....... .......+ . .....+.+++..||+.+|.+||+|
T Consensus 227 G~~l~el~~~~~~~p~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~li~~cl~~~p~~RPs~ 295 (304)
T cd05096 227 GVTLWEILMLCKEQPYGEL--TD-EQVIENAGEFFRDQGRQVYLFRP----P----PCPQGLYELMLQCWSRDCRERPSF 295 (304)
T ss_pred HHHHHHHHHccCCCCCCcC--CH-HHHHHHHHHHhhhccccccccCC----C----CCCHHHHHHHHHHccCCchhCcCH
Confidence 99999999754 444322 11 11222332222111 10100001 0 112468899999999999999999
Q ss_pred hhHHHHhh
Q 003278 399 KWVIEAVS 406 (834)
Q Consensus 399 ~~V~~~l~ 406 (834)
.+|.+.|+
T Consensus 296 ~~i~~~l~ 303 (304)
T cd05096 296 SDIHAFLT 303 (304)
T ss_pred HHHHHHHh
Confidence 99998875
No 43
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-40 Score=359.77 Aligned_cols=249 Identities=25% Similarity=0.410 Sum_probs=203.7
Q ss_pred hcCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc----Ch-hhHHHHHHHHHHHHhCC-CCceeeEeeeEEeCCE
Q 003278 109 GSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK----GE-RFEKTFAAELVAVAHLR-HRNLVRLRGWCVHEDQ 182 (834)
Q Consensus 109 ~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~----~~-~~~~~~~~E~~~l~~l~-H~nIv~l~g~~~~~~~ 182 (834)
..++|...+.||+|+||.||.|....+|..||||.+... .. ...+...+|+.++++++ ||||++++.++...+.
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 346788999999999999999999999999999977653 12 33456678999999999 9999999999999999
Q ss_pred EEEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCC-CceEEee
Q 003278 183 LLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQ-YNARLGD 261 (834)
Q Consensus 183 ~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~-~~~kl~D 261 (834)
+|+||||+.+|+|.+++... .++.+.....++.|++.|++|||+. +|+||||||+|||||.+ +++||+|
T Consensus 95 ~~ivmEy~~gGdL~~~i~~~-------g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~D 164 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVNK-------GRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSD 164 (370)
T ss_pred EEEEEEecCCccHHHHHHHc-------CCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEec
Confidence 99999999999999999752 4688889999999999999999996 99999999999999999 9999999
Q ss_pred ccchhhhh-hhhhhhhhcccccccccccccceeeeccccCCCccccccCC-CCCcccceeehhhHHHHHHhCCccCCCCC
Q 003278 262 FGLARWLE-HELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGS-VATAKSDVFSFGIVVLEVVSGRRAVDLTY 339 (834)
Q Consensus 262 FGla~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~-~~~~ksDV~SfGvvl~ElltG~~p~~~~~ 339 (834)
||++.... .+ ....+.+||+.|+|||++.... +...++||||+||+||.|++|+-||+...
T Consensus 165 FG~s~~~~~~~-----------------~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~ 227 (370)
T KOG0583|consen 165 FGLSAISPGED-----------------GLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN 227 (370)
T ss_pred cccccccCCCC-----------------CcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc
Confidence 99998652 11 1145678999999999998755 55689999999999999999999997521
Q ss_pred CCccchHHHHHHHHhhcCc--cccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHH
Q 003278 340 PDDQIILLDWIRRLSDEGK--VLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIE 403 (834)
Q Consensus 340 ~~~~~~l~~~~~~~~~~~~--~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~ 403 (834)
...+ .+.+ ..+. +...++ -..+..|+..|+..||..|+++.++++
T Consensus 228 ---~~~l---~~ki-~~~~~~~p~~~~------------S~~~~~Li~~mL~~~P~~R~t~~~i~~ 274 (370)
T KOG0583|consen 228 ---VPNL---YRKI-RKGEFKIPSYLL------------SPEARSLIEKMLVPDPSTRITLLEILE 274 (370)
T ss_pred ---HHHH---HHHH-hcCCccCCCCcC------------CHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence 1111 1111 1111 111110 235788999999999999999999984
No 44
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-40 Score=343.83 Aligned_cols=268 Identities=24% Similarity=0.331 Sum_probs=208.0
Q ss_pred hcCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC-hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEE
Q 003278 109 GSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVY 187 (834)
Q Consensus 109 ~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 187 (834)
..+.|+..++||.|.-++||+|+....+..||||++.-.. ....+.+.+|+..|+.++|||||+++..|..+..+|+||
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm 103 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM 103 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence 3467888999999999999999999999999999986432 233578899999999999999999999999999999999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhh
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARW 267 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 267 (834)
.||.+||+.+++...- ...+++..+..|.+++++||.|||.+ |.||||||+.|||||++|.+||+|||.+-.
T Consensus 104 pfMa~GS~ldIik~~~-----~~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~ 175 (516)
T KOG0582|consen 104 PFMAGGSLLDIIKTYY-----PDGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSAS 175 (516)
T ss_pred hhhcCCcHHHHHHHHc-----cccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeee
Confidence 9999999999997542 23488899999999999999999996 999999999999999999999999998865
Q ss_pred hhhhhhhhhhcccccccccccccceeeeccccCCCccc-cccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchH
Q 003278 268 LEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPES-FQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346 (834)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~-~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l 346 (834)
+-.... .......++.||+.|||||+ .+...-|+.|+||||||++.+||.+|..||.... .-++.+
T Consensus 176 l~~~G~------------R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~p-PmkvLl 242 (516)
T KOG0582|consen 176 LFDSGD------------RQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYP-PMKVLL 242 (516)
T ss_pred ecccCc------------eeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCC-hHHHHH
Confidence 533210 01111256789999999999 5556678999999999999999999999997532 222221
Q ss_pred HHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 347 LDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 347 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
. .+ .+... ..+....+.+.+..-...+.++...||+.||.+||+..+++..
T Consensus 243 ~----tL--qn~pp-~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 243 L----TL--QNDPP-TLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred H----Hh--cCCCC-CcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 1 11 11111 0110000011111112367788899999999999999998763
No 45
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-40 Score=342.00 Aligned_cols=243 Identities=20% Similarity=0.256 Sum_probs=191.9
Q ss_pred hCcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCCChh--HHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPA--LRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIY 589 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~--~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~ 589 (834)
++|...+.||+|+||+||..+. +.++.+|+|.++....-. ..+....|..+|.+++||.||+|+-.+.+.+.+|+|+
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVl 104 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVL 104 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEE
Confidence 5788899999999999999985 558899999987543221 2355778999999999999999999999999999999
Q ss_pred eccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccc
Q 003278 590 DYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFL 669 (834)
Q Consensus 590 Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~ 669 (834)
||+.||.|..+|.+.+. +++....-++.+|+.||.|||+ .+||||||||+|||||.+|.++|+||||++..
T Consensus 105 d~~~GGeLf~hL~~eg~------F~E~~arfYlaEi~lAL~~LH~---~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~ 175 (357)
T KOG0598|consen 105 DYLNGGELFYHLQREGR------FSEDRARFYLAEIVLALGYLHS---KGIIYRDLKPENILLDEQGHIKLTDFGLCKED 175 (357)
T ss_pred eccCCccHHHHHHhcCC------cchhHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHeeecCCCcEEEeccccchhc
Confidence 99999999999976543 6666556688999999999996 79999999999999999999999999999853
Q ss_pred ccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCcc
Q 003278 670 TRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPL 749 (834)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 749 (834)
... ...+.++|||+.|||||++.+..|+..+|.||+||++|||+||..||....... ... .....+.
T Consensus 176 ~~~-------~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~-~~~---~I~~~k~-- 242 (357)
T KOG0598|consen 176 LKD-------GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKK-MYD---KILKGKL-- 242 (357)
T ss_pred ccC-------CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHH-HHH---HHhcCcC--
Confidence 322 223456899999999999999999999999999999999999999997543221 111 1111110
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCC
Q 003278 750 AELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPS 786 (834)
Q Consensus 750 ~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPt 786 (834)
.....+...+...+++ .-+..||++|--
T Consensus 243 ------~~~p~~ls~~ardll~---~LL~rdp~~RLg 270 (357)
T KOG0598|consen 243 ------PLPPGYLSEEARDLLK---KLLKRDPRQRLG 270 (357)
T ss_pred ------CCCCccCCHHHHHHHH---HHhccCHHHhcC
Confidence 1112223345555554 567789999963
No 46
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.6e-39 Score=363.54 Aligned_cols=262 Identities=24% Similarity=0.308 Sum_probs=201.3
Q ss_pred hCcCcCCcccccCCcEEEEEEE------CCCcEEEEEEecCCCChhHHHHHHHHHHHHHhc-cCCCceeEEEEEeeCCeE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFL------DNHQYVLVKRLGMSKCPALRTRFSNELQNLARL-RHRNLVQLCGWCTEQGEM 585 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l-~HpNiv~l~g~~~~~~~~ 585 (834)
++|...+.||+|+||.||+|.. +++..||||+++........+.|.+|+.+|..+ +|||||+++|+|.+.+..
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~ 114 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPT 114 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcc
Confidence 3566678899999999999963 235689999987554444557789999999999 899999999999999999
Q ss_pred EEEEeccCCCchhhhhhcCCCC----------------------------------------------------------
Q 003278 586 LVIYDYSATRILSHLLFHNNHR---------------------------------------------------------- 607 (834)
Q Consensus 586 ~lv~Ey~~~g~L~~~l~~~~~~---------------------------------------------------------- 607 (834)
++||||+++|+|.+++......
T Consensus 115 ~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (375)
T cd05104 115 LVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSY 194 (375)
T ss_pred eeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccccee
Confidence 9999999999999998653210
Q ss_pred -----------CCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCCCC
Q 003278 608 -----------IGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGH 676 (834)
Q Consensus 608 -----------~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~~~ 676 (834)
.....++|..++.++.|+++||+|||+ .+|+||||||+|||+++++.+||+|||+++........
T Consensus 195 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~- 270 (375)
T cd05104 195 IDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY- 270 (375)
T ss_pred cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCchhhEEEECCCcEEEecCccceeccCcccc-
Confidence 011247899999999999999999996 69999999999999999999999999999765432110
Q ss_pred cccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcCcccccccc
Q 003278 677 RKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDL 755 (834)
Q Consensus 677 ~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 755 (834)
.......++..|||||++.+..++.++|||||||++|||+| |..|+............+... .+.. .
T Consensus 271 ----~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~---~~~~----~- 338 (375)
T cd05104 271 ----VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEG---YRML----S- 338 (375)
T ss_pred ----cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhC---ccCC----C-
Confidence 11122346678999999999999999999999999999998 777775433332222222111 0110 0
Q ss_pred ccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHcc
Q 003278 756 SLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDG 796 (834)
Q Consensus 756 ~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~ 796 (834)
....+. ++.+++.+||+.||++||||.+|++.|+.
T Consensus 339 ---~~~~~~---~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 339 ---PECAPS---EMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred ---CCCCCH---HHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 111223 35566679999999999999999999974
No 47
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-40 Score=357.74 Aligned_cols=250 Identities=25% Similarity=0.382 Sum_probs=206.5
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEccC
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMP 191 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 191 (834)
.|..-.+||+|+.|.||.+....++..||||++........+-..+|+.+|+..+|+|||.++..|...+++|.|||||+
T Consensus 274 ~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ 353 (550)
T KOG0578|consen 274 KYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYME 353 (550)
T ss_pred hhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecC
Confidence 46777899999999999999999999999999987766667778999999999999999999999999999999999999
Q ss_pred CCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhh
Q 003278 192 NRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHE 271 (834)
Q Consensus 192 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 271 (834)
+|+|.+.+.. ..+++.++..|++++++||+|||.+ +|||||||++||||+.++.+||+|||++..+..+
T Consensus 354 ggsLTDvVt~--------~~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~ 422 (550)
T KOG0578|consen 354 GGSLTDVVTK--------TRMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEE 422 (550)
T ss_pred CCchhhhhhc--------ccccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeeccccc
Confidence 9999988743 4589999999999999999999996 9999999999999999999999999999866433
Q ss_pred hhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHHH
Q 003278 272 LQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIR 351 (834)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~~ 351 (834)
. ...++.+|||.|||||++... .|..|+||||||++++||+-|.+|+-...+-.. +.
T Consensus 423 ~----------------~KR~TmVGTPYWMAPEVvtrk-~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrA------ly 479 (550)
T KOG0578|consen 423 Q----------------SKRSTMVGTPYWMAPEVVTRK-PYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA------LY 479 (550)
T ss_pred c----------------CccccccCCCCccchhhhhhc-ccCccccchhhhhHHHHHhcCCCCccCCChHHH------HH
Confidence 1 125678899999999998654 789999999999999999999999854222111 11
Q ss_pred HHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 352 RLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 352 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
.+...|. +.+... ..--..+.++..+||+.|+.+||++.|+++.
T Consensus 480 LIa~ng~------P~lk~~---~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 480 LIATNGT------PKLKNP---EKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred HHhhcCC------CCcCCc---cccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 1112221 222111 1112357788899999999999999999874
No 48
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-41 Score=372.68 Aligned_cols=267 Identities=22% Similarity=0.356 Sum_probs=216.0
Q ss_pred cccHHHHHHHhhCcCc---------CCcccccCCcEEEEEEECC----CcEEEEEEecCCCChhHHHHHHHHHHHHHhcc
Q 003278 502 EISFKEIISATNNFSE---------SQRVAEMDFGTAYQGFLDN----HQYVLVKRLGMSKCPALRTRFSNELQNLARLR 568 (834)
Q Consensus 502 ~~~~~el~~at~~f~~---------~~~ig~g~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~ 568 (834)
.++|++--+|-..|.. .+.||.|.||.||+|.|+- ...||||.++....+..+..|+.|+.+|.+..
T Consensus 609 P~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFd 688 (996)
T KOG0196|consen 609 PHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFD 688 (996)
T ss_pred CccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCC
Confidence 3556555555544432 4679999999999999743 35799999998888888899999999999999
Q ss_pred CCCceeEEEEEeeCCeEEEEEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccC
Q 003278 569 HRNLVQLCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSS 648 (834)
Q Consensus 569 HpNiv~l~g~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~ 648 (834)
||||++|-|+.+....++||.|||+||+|+.+|+.+. ..+.|.+.+-++++||.||.||-+ .+.|||||..+
T Consensus 689 HPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~D-----GqftviQLVgMLrGIAsGMkYLsd---m~YVHRDLAAR 760 (996)
T KOG0196|consen 689 HPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQND-----GQFTVIQLVGMLRGIASGMKYLSD---MNYVHRDLAAR 760 (996)
T ss_pred CCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcC-----CceEeehHHHHHHHHHHHhHHHhh---cCchhhhhhhh
Confidence 9999999999999999999999999999999998754 248888899999999999999986 69999999999
Q ss_pred ceeecCCCCceEeeeeeccccccCCCCCcccccCcccccc--ccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCc
Q 003278 649 AITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRG--IFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMA 725 (834)
Q Consensus 649 NILld~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~G--t~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p 725 (834)
|||++.+..+||+||||++.+.++... ..++.-| ...|.|||.|...++|.+|||||||||+||.++ |.+|
T Consensus 761 NILVNsnLvCKVsDFGLSRvledd~~~------~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERP 834 (996)
T KOG0196|consen 761 NILVNSNLVCKVSDFGLSRVLEDDPEA------AYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 834 (996)
T ss_pred heeeccceEEEeccccceeecccCCCc------cccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCc
Confidence 999999999999999999987654311 1111112 357999999999999999999999999999776 8888
Q ss_pred cCCCCCchhHHHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccC
Q 003278 726 VDFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGN 797 (834)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~ 797 (834)
+-.. .+..++..+.+......| .++...|-+||+.||+.|..+||+|.+|+..|+..
T Consensus 835 YWdm-SNQdVIkaIe~gyRLPpP--------------mDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDkl 891 (996)
T KOG0196|consen 835 YWDM-SNQDVIKAIEQGYRLPPP--------------MDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKL 891 (996)
T ss_pred cccc-chHHHHHHHHhccCCCCC--------------CCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHH
Confidence 7644 444444544433222111 22334677889999999999999999999998743
No 49
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=3.6e-40 Score=353.34 Aligned_cols=248 Identities=25% Similarity=0.370 Sum_probs=204.0
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc--ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK--GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYD 188 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 188 (834)
++|...+.||+|+||+||||+.+.+.+.||+|.+.+. .++..+.+.+|+++++.|+|||||.++++|+...++|+|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 4678888999999999999999999999999999764 34456778999999999999999999999999999999999
Q ss_pred ccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhh
Q 003278 189 YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWL 268 (834)
Q Consensus 189 y~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 268 (834)
|+.| +|..+|.. ...|+++....|+.+++.||.|||+. +|+|||+||.||||+..+.+|+||||+||.+
T Consensus 82 ~a~g-~L~~il~~-------d~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m 150 (808)
T KOG0597|consen 82 YAVG-DLFTILEQ-------DGKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAM 150 (808)
T ss_pred hhhh-hHHHHHHh-------ccCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhc
Confidence 9987 99999964 35689999999999999999999995 9999999999999999999999999999965
Q ss_pred hhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHH
Q 003278 269 EHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLD 348 (834)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~ 348 (834)
... ....+.+.|||-|||||.+. +..|+..+|.||+||+|||+.+|++||... .+..
T Consensus 151 ~~~----------------t~vltsikGtPlYmAPElv~-e~pyd~~sDlWslGcilYE~~~G~PPF~a~------si~~ 207 (808)
T KOG0597|consen 151 STN----------------TSVLTSIKGTPLYMAPELVE-EQPYDHTSDLWSLGCILYELYVGQPPFYAR------SITQ 207 (808)
T ss_pred ccC----------------ceeeeeccCcccccCHHHHc-CCCccchhhHHHHHHHHHHHhcCCCCchHH------HHHH
Confidence 432 12257788999999999887 557899999999999999999999999532 2333
Q ss_pred HHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 349 WIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 349 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
.++.+..+ +... +...-..+..+..--++.||.+|-+-.+++..
T Consensus 208 Lv~~I~~d--------~v~~----p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 208 LVKSILKD--------PVKP----PSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred HHHHHhcC--------CCCC----cccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 33333221 1111 11122345566667789999999998887753
No 50
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2.3e-39 Score=348.68 Aligned_cols=252 Identities=24% Similarity=0.318 Sum_probs=197.3
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC---hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEE
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYD 188 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 188 (834)
+|+..+.||+|+||.||+|....+|+.||||.+.... ......+.+|+.++.+++|+||+++++++.+.+..++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 3677889999999999999998899999999986432 2233567899999999999999999999999999999999
Q ss_pred ccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhh
Q 003278 189 YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWL 268 (834)
Q Consensus 189 y~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 268 (834)
|+++|+|..++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+
T Consensus 81 ~~~~g~L~~~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~ 152 (285)
T cd05631 81 IMNGGDLKFHIYNMG-----NPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQI 152 (285)
T ss_pred ecCCCcHHHHHHhhC-----CCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEc
Confidence 999999998875432 23589999999999999999999985 9999999999999999999999999998753
Q ss_pred hhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHH
Q 003278 269 EHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLD 348 (834)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~ 348 (834)
.... ......||+.|+|||++... .++.++|||||||++|||+||+.||......... ..
T Consensus 153 ~~~~-----------------~~~~~~g~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~--~~ 212 (285)
T cd05631 153 PEGE-----------------TVRGRVGTVGYMAPEVINNE-KYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKR--EE 212 (285)
T ss_pred CCCC-----------------eecCCCCCCCccCHhhhcCC-CCCcccCchhHHHHHHHHHhCCCCCCCCCcchhH--HH
Confidence 2110 01234689999999998754 6799999999999999999999999754322111 11
Q ss_pred HHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCc-----hhhHHH
Q 003278 349 WIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPS-----MKWVIE 403 (834)
Q Consensus 349 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs-----m~~V~~ 403 (834)
.... ..... .... ..+ ...+..|+..||+.||.+||+ +.++++
T Consensus 213 ~~~~-~~~~~------~~~~-~~~----s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 213 VDRR-VKEDQ------EEYS-EKF----SEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred HHHH-hhccc------ccCC-ccC----CHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 1111 11100 0000 111 235778999999999999997 666664
No 51
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=8.5e-40 Score=322.95 Aligned_cols=262 Identities=24% Similarity=0.303 Sum_probs=203.7
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc--ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEc
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK--GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDY 189 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 189 (834)
.|...++||+|.||.||+|++..+|+.||||+++.. .+.......+|++.|+.++|+|||.|+++|...+.+-||+||
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf 82 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF 82 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence 466778999999999999999999999999998643 223456678999999999999999999999999999999999
Q ss_pred cCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhh
Q 003278 190 MPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLE 269 (834)
Q Consensus 190 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~ 269 (834)
|+. +|+..+... ...|+-.+++.++.++.+||+|||+. .|+||||||.|+|+++++.+||+|||+|+.+.
T Consensus 83 m~t-dLe~vIkd~------~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~ 152 (318)
T KOG0659|consen 83 MPT-DLEVVIKDK------NIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFG 152 (318)
T ss_pred ccc-cHHHHhccc------ccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccC
Confidence 974 899888653 35788899999999999999999995 99999999999999999999999999999764
Q ss_pred hhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHH
Q 003278 270 HELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDW 349 (834)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~ 349 (834)
.... ..+.-+-|.+|.|||.+...+.|+..+||||.|||+.||+-|.+-|....+-++. ..
T Consensus 153 ~p~~----------------~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL---~~ 213 (318)
T KOG0659|consen 153 SPNR----------------IQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQL---SK 213 (318)
T ss_pred CCCc----------------ccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHH---HH
Confidence 3211 0122257999999999988888999999999999999999998766543322221 22
Q ss_pred HHHHhhcCc---------------cccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 350 IRRLSDEGK---------------VLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 350 ~~~~~~~~~---------------~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
+-+.+.... +.+...+.+. .-+.. ......+|...-+..||.+|.+++|.+++
T Consensus 214 If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~-~lf~a-as~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 214 IFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLN-NLFPA-ASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred HHHHcCCCCcccCccccccccHHHHhcCCCCccc-ccccc-ccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 222111110 1111111111 11222 22345888889999999999999998864
No 52
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-39 Score=359.50 Aligned_cols=258 Identities=28% Similarity=0.400 Sum_probs=202.4
Q ss_pred cCCCCCCCeeeccCCeEEEEEEECCCCe---E-EEEEEecc---cChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCE
Q 003278 110 SNGFDEDEVLGSGGFGKVYRAVLPSDGT---V-VAVKCLAE---KGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQ 182 (834)
Q Consensus 110 t~~f~~~~~LG~G~fG~Vy~~~~~~~g~---~-vAvK~l~~---~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~ 182 (834)
.++-...++||+|+||+||+|.++..+. . ||||..+. ......++|.+|.++|++++|||||+|||++.....
T Consensus 156 H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~P 235 (474)
T KOG0194|consen 156 HSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEP 235 (474)
T ss_pred ccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCc
Confidence 3444555899999999999999865422 3 89998875 235567889999999999999999999999999999
Q ss_pred EEEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeec
Q 003278 183 LLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDF 262 (834)
Q Consensus 183 ~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 262 (834)
+++|||+|+||+|.++|...+ ..++..+++.++.++|+||+|||+. ++|||||-+.|+|++.++.+||+||
T Consensus 236 l~ivmEl~~gGsL~~~L~k~~------~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDF 306 (474)
T KOG0194|consen 236 LMLVMELCNGGSLDDYLKKNK------KSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDF 306 (474)
T ss_pred cEEEEEecCCCcHHHHHHhCC------CCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCcc
Confidence 999999999999999997653 2588999999999999999999996 9999999999999999999999999
Q ss_pred cchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCC
Q 003278 263 GLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPD 341 (834)
Q Consensus 263 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~ 341 (834)
|+++.-. .+.+. .....-...|+|||.+..+ .++.|+|||||||++||+.+ |..|+.....
T Consensus 307 GLs~~~~---~~~~~-------------~~~~klPirWLAPEtl~~~-~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~- 368 (474)
T KOG0194|consen 307 GLSRAGS---QYVMK-------------KFLKKLPIRWLAPETLNTG-IFSFKTDVWSFGVLLWEIFENGAEPYPGMKN- 368 (474)
T ss_pred ccccCCc---ceeec-------------cccccCcceecChhhhccC-ccccccchhheeeeEEeeeccCCCCCCCCCH-
Confidence 9998532 11110 0011134789999999888 78999999999999999999 7777653321
Q ss_pred ccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcCC
Q 003278 342 DQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGSY 409 (834)
Q Consensus 342 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~~ 409 (834)
..+..++ ...+...... . .....+..+...||..+|+.||+|.+|.+.+....
T Consensus 369 --~~v~~kI---~~~~~r~~~~-------~---~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~ 421 (474)
T KOG0194|consen 369 --YEVKAKI---VKNGYRMPIP-------S---KTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALE 421 (474)
T ss_pred --HHHHHHH---HhcCccCCCC-------C---CCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHH
Confidence 1122222 1222211111 1 22356777888999999999999999999988754
No 53
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=2.6e-39 Score=361.66 Aligned_cols=262 Identities=23% Similarity=0.323 Sum_probs=201.0
Q ss_pred hCcCcCCcccccCCcEEEEEEE------CCCcEEEEEEecCCCChhHHHHHHHHHHHHHhc-cCCCceeEEEEEeeCCeE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFL------DNHQYVLVKRLGMSKCPALRTRFSNELQNLARL-RHRNLVQLCGWCTEQGEM 585 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l-~HpNiv~l~g~~~~~~~~ 585 (834)
++|...+.||+|+||.||+|.. +++..||||.+...........+.+|+++++.+ +|||||+++|+|.+.+..
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~ 117 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPV 117 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCe
Confidence 4677788999999999999873 234579999997655555567789999999999 899999999999999999
Q ss_pred EEEEeccCCCchhhhhhcCCCC----------------------------------------------------------
Q 003278 586 LVIYDYSATRILSHLLFHNNHR---------------------------------------------------------- 607 (834)
Q Consensus 586 ~lv~Ey~~~g~L~~~l~~~~~~---------------------------------------------------------- 607 (834)
++||||+++|+|.+++......
T Consensus 118 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (374)
T cd05106 118 LVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDS 197 (374)
T ss_pred EEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccc
Confidence 9999999999999988643210
Q ss_pred ------CCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCCCCccccc
Q 003278 608 ------IGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATS 681 (834)
Q Consensus 608 ------~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~~~ 681 (834)
.....++|...++|+.|+++||+|||+ .+|+||||||+|||+++++.+||+|||+++.+..... ..
T Consensus 198 ~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~-----~~ 269 (374)
T cd05106 198 KDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLAS---KNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN-----YV 269 (374)
T ss_pred cchhccCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcc-----ee
Confidence 011247888899999999999999996 6999999999999999999999999999976532211 01
Q ss_pred CccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcCccccccccccCCC
Q 003278 682 GNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGE 760 (834)
Q Consensus 682 ~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 760 (834)
......+++.|||||++.++.++.++|||||||++|||+| |+.||............... ...+ ... .
T Consensus 270 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~---~~~~-------~~~-~ 338 (374)
T cd05106 270 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKR---GYQM-------SRP-D 338 (374)
T ss_pred eccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHc---ccCc-------cCC-C
Confidence 1122346678999999999999999999999999999998 99998654332221111110 0000 001 1
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHcc
Q 003278 761 YNHKELMRLIKLGIACTLSNPELRPSMRQILSILDG 796 (834)
Q Consensus 761 ~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~ 796 (834)
..+. .+.+++.+||+.||++|||+.+|++.|+.
T Consensus 339 ~~~~---~l~~li~~cl~~dp~~RPs~~~l~~~l~~ 371 (374)
T cd05106 339 FAPP---EIYSIMKMCWNLEPTERPTFSQISQLIQR 371 (374)
T ss_pred CCCH---HHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 1123 35556669999999999999999999875
No 54
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1e-39 Score=354.65 Aligned_cols=269 Identities=25% Similarity=0.388 Sum_probs=208.6
Q ss_pred ccHHHHHhhcCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc--ChhhHHHHHHHHHHHHhCCCCceeeEeeeEE
Q 003278 101 FSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK--GERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178 (834)
Q Consensus 101 f~~~el~~~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~ 178 (834)
.+..+..+--+.+...+.||+|.||+||+|.|.. .||||.++.. .....+.|.+|+.++++-+|.||+=+.|||.
T Consensus 382 ~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~ 458 (678)
T KOG0193|consen 382 DSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACM 458 (678)
T ss_pred ccccccccCHHHhhccceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhc
Confidence 3445556666667788999999999999999943 4999998754 3446688999999999999999999999999
Q ss_pred eCCEEEEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceE
Q 003278 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNAR 258 (834)
Q Consensus 179 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~k 258 (834)
.++. .+|.-+|.|-+|+.+||-.. ..|+..+.+.|+.|||+|+.|||.+ +|||||||+.||+|.+++.+|
T Consensus 459 ~p~~-AIiTqwCeGsSLY~hlHv~e------tkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVk 528 (678)
T KOG0193|consen 459 NPPL-AIITQWCEGSSLYTHLHVQE------TKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVK 528 (678)
T ss_pred CCce-eeeehhccCchhhhhccchh------hhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEE
Confidence 8876 99999999999999998653 4588889999999999999999995 999999999999999999999
Q ss_pred EeeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCcccccc--CCCCCcccceeehhhHHHHHHhCCccCC
Q 003278 259 LGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQK--GSVATAKSDVFSFGIVVLEVVSGRRAVD 336 (834)
Q Consensus 259 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~--~~~~~~ksDV~SfGvvl~ElltG~~p~~ 336 (834)
|+||||+..-..- . .........|..-|||||++.. ...++..|||||||||+|||+||.-|+.
T Consensus 529 IgDFGLatvk~~w---------~-----g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys 594 (678)
T KOG0193|consen 529 IGDFGLATVKTRW---------S-----GEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS 594 (678)
T ss_pred Eecccceeeeeee---------c-----cccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC
Confidence 9999998531100 0 0001123347889999999853 3367999999999999999999999987
Q ss_pred CCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcCC
Q 003278 337 LTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGSY 409 (834)
Q Consensus 337 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~~ 409 (834)
. ...+++.+ +...|.+. .|... ........|.+|...||..+|++||.+.+++..|....
T Consensus 595 i-~~~dqIif------mVGrG~l~--pd~s~----~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~ 654 (678)
T KOG0193|consen 595 I-QNRDQIIF------MVGRGYLM--PDLSK----IRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELL 654 (678)
T ss_pred C-CChhheEE------EecccccC--ccchh----hhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhh
Confidence 3 33333221 11222211 11111 01122356889999999999999999999999887654
No 55
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=5.7e-40 Score=328.99 Aligned_cols=262 Identities=21% Similarity=0.244 Sum_probs=195.9
Q ss_pred CcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCCC-hhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEec
Q 003278 514 NFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKC-PALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY 591 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~-~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey 591 (834)
.|....++|+|+||+|||++. +.|+.||||++..+.. +..++--.+||++|++|+|||+|.|+.+|.....++||+||
T Consensus 3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~ 82 (396)
T KOG0593|consen 3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY 82 (396)
T ss_pred HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence 355567899999999999996 4599999999876544 66677778999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccccc
Q 003278 592 SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTR 671 (834)
Q Consensus 592 ~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~ 671 (834)
|...-|+++-+..+ .++......++.|++.|+.|+|+ .+||||||||+||||+.++.+|+||||+|+.+..
T Consensus 83 ~dhTvL~eLe~~p~------G~~~~~vk~~l~Q~l~ai~~cHk---~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~ 153 (396)
T KOG0593|consen 83 CDHTVLHELERYPN------GVPSELVKKYLYQLLKAIHFCHK---NNCIHRDIKPENILITQNGVVKLCDFGFARTLSA 153 (396)
T ss_pred cchHHHHHHHhccC------CCCHHHHHHHHHHHHHHhhhhhh---cCeecccCChhheEEecCCcEEeccchhhHhhcC
Confidence 99988876644322 26677778899999999999996 6899999999999999999999999999998763
Q ss_pred CCCCCcccccCccccccccCccchhcccc-CCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHH-------
Q 003278 672 NDHGHRKATSGNRSVRGIFGYMSPEYIES-GEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFE------- 743 (834)
Q Consensus 672 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~------- 743 (834)
... ..+-++-|.-|.|||.+.+ -.|+..+||||.||++.||+||+.-|.....-+.+. .+....
T Consensus 154 pgd-------~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy-~I~ktLG~L~prh 225 (396)
T KOG0593|consen 154 PGD-------NYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLY-LIRKTLGNLIPRH 225 (396)
T ss_pred Ccc-------hhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHH-HHHHHHcccCHHH
Confidence 221 1234567889999999987 678999999999999999999986554333222211 111110
Q ss_pred ----hhcCccccccccccCCCCC-----HHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 744 ----ARKRPLAELVDLSLNGEYN-----HKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 744 ----~~~~~~~~~~d~~l~~~~~-----~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
....-+.-+.=|......+ +.-..-++.++..|++.||++|++-++++.
T Consensus 226 q~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 226 QSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred HHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 0000011110011000000 111224677888999999999999999874
No 56
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-40 Score=349.49 Aligned_cols=249 Identities=25% Similarity=0.427 Sum_probs=204.7
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc-ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEcc
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYM 190 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 190 (834)
-|+..+.||+|+||.||||.+..+++.||+|++.-. .+...+..++|+.+|++++++||.++||.+..+..++++||||
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~ 93 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC 93 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence 467778999999999999999999999999998643 3445677889999999999999999999999999999999999
Q ss_pred CCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhh
Q 003278 191 PNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEH 270 (834)
Q Consensus 191 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~ 270 (834)
.+|++.+.|... ..+++....-|++++..||.|||++ +.||||||+.|||+..+|.+||+|||.+-++..
T Consensus 94 ~gGsv~~lL~~~-------~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~ 163 (467)
T KOG0201|consen 94 GGGSVLDLLKSG-------NILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTN 163 (467)
T ss_pred cCcchhhhhccC-------CCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeec
Confidence 999999988532 3346666777999999999999997 999999999999999999999999999987654
Q ss_pred hhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHH
Q 003278 271 ELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWI 350 (834)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~ 350 (834)
... ...+++|||.|||||++. +..|+.|+||||||++.+||++|.+|+....+..-..
T Consensus 164 ~~~----------------rr~tfvGTPfwMAPEVI~-~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlf----- 221 (467)
T KOG0201|consen 164 TVK----------------RRKTFVGTPFWMAPEVIK-QSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLF----- 221 (467)
T ss_pred hhh----------------ccccccccccccchhhhc-cccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEE-----
Confidence 321 135678999999999997 5578999999999999999999999987655422111
Q ss_pred HHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 351 RRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 351 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
.+....-|.+. +.+. ..+.+++..||+.||+.||++.+++..
T Consensus 222 -------lIpk~~PP~L~-~~~S----~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 222 -------LIPKSAPPRLD-GDFS----PPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred -------eccCCCCCccc-cccC----HHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 11222223332 2333 357788999999999999999988753
No 57
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-39 Score=377.71 Aligned_cols=265 Identities=29% Similarity=0.456 Sum_probs=208.4
Q ss_pred cCCCCCCCeeeccCCeEEEEEEECCC-C----eEEEEEEeccc-ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEE
Q 003278 110 SNGFDEDEVLGSGGFGKVYRAVLPSD-G----TVVAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQL 183 (834)
Q Consensus 110 t~~f~~~~~LG~G~fG~Vy~~~~~~~-g----~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~ 183 (834)
..+-+..+.||+|+||+||.|....- | ..||||.+.+. +.+...+|++|..+|++++|||||+|+|.|.+....
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~ 770 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP 770 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence 34556678999999999999987532 3 34999998764 455678899999999999999999999999999999
Q ss_pred EEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeecc
Q 003278 184 LLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFG 263 (834)
Q Consensus 184 ~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 263 (834)
++++|||.+|+|..+|............|+....+.++.|||+|+.||+++ ++|||||...|+||+....+||+|||
T Consensus 771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDFG 847 (1025)
T KOG1095|consen 771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADFG 847 (1025)
T ss_pred EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEcccc
Confidence 999999999999999987644444456789999999999999999999996 99999999999999999999999999
Q ss_pred chhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCc
Q 003278 264 LARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDD 342 (834)
Q Consensus 264 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~ 342 (834)
+||-+.....+.... ...=...|||||++..+ .+|.|+|||||||+|||++| |..|+.... .
T Consensus 848 lArDiy~~~yyr~~~--------------~a~lPvkWm~PEsl~d~-iFtskSDvWsFGVllWEifslG~~PY~~~~--n 910 (1025)
T KOG1095|consen 848 LARDIYDKDYYRKHG--------------EAMLPVKWMPPESLKDG-IFTSKSDVWSFGVLLWEIFSLGATPYPSRS--N 910 (1025)
T ss_pred hhHhhhhchheeccC--------------ccccceecCCHHHHhhc-ccccccchhhhHHHHHHHHhCCCCCCCCcc--h
Confidence 999654443332110 01123689999999886 78999999999999999999 555553221 1
Q ss_pred cchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcCC
Q 003278 343 QIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGSY 409 (834)
Q Consensus 343 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~~ 409 (834)
...+..| ...| ||... ....+.+.+|+..||+.+|++||++..+++.+..+.
T Consensus 911 ~~v~~~~----~~gg--------RL~~P---~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~ 962 (1025)
T KOG1095|consen 911 FEVLLDV----LEGG--------RLDPP---SYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAIS 962 (1025)
T ss_pred HHHHHHH----HhCC--------ccCCC---CCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhh
Confidence 1112112 2233 22111 123467889999999999999999999999876654
No 58
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=7.7e-39 Score=352.28 Aligned_cols=200 Identities=27% Similarity=0.395 Sum_probs=175.0
Q ss_pred cCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc-ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEE
Q 003278 110 SNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYD 188 (834)
Q Consensus 110 t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 188 (834)
-++|+..+.||+|+||.||+++...+|..||+|.+... .....+.+.+|+.+|.+++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 46799999999999999999999989999999998654 33455679999999999999999999999999999999999
Q ss_pred ccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhh
Q 003278 189 YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWL 268 (834)
Q Consensus 189 y~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 268 (834)
|+++|+|.+++... ..+++..+..++.|++.||.|||+. .+|+||||||+|||++.++.+||+|||+++.+
T Consensus 84 ~~~~~~L~~~l~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 154 (331)
T cd06649 84 HMDGGSLDQVLKEA-------KRIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 154 (331)
T ss_pred cCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEcCCCcEEEccCcccccc
Confidence 99999999998643 3578899999999999999999984 36999999999999999999999999998754
Q ss_pred hhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCC
Q 003278 269 EHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDL 337 (834)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~ 337 (834)
... ......||+.|+|||++... .++.++|||||||++|||+||+.||..
T Consensus 155 ~~~------------------~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 155 IDS------------------MANSFVGTRSYMSPERLQGT-HYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred ccc------------------ccccCCCCcCcCCHhHhcCC-CCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 211 02334699999999998654 679999999999999999999999864
No 59
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=7.7e-39 Score=344.67 Aligned_cols=251 Identities=16% Similarity=0.208 Sum_probs=194.1
Q ss_pred cCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCCC--hhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEec
Q 003278 515 FSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKC--PALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY 591 (834)
Q Consensus 515 f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~--~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey 591 (834)
|...+.||+|+||.||+|.. .++..||||.+..... ......+.+|+.++.+++||||+++++++.+.+..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 56678899999999999985 5788999998864322 22335678999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccccc
Q 003278 592 SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTR 671 (834)
Q Consensus 592 ~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~ 671 (834)
+++|+|..++..... ..+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||++.....
T Consensus 82 ~~~g~L~~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~ 154 (285)
T cd05631 82 MNGGDLKFHIYNMGN----PGFDEQRAIFYAAELCCGLEDLQR---ERIVYRDLKPENILLDDRGHIRISDLGLAVQIPE 154 (285)
T ss_pred cCCCcHHHHHHhhCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCC
Confidence 999999888754321 247889999999999999999996 6999999999999999999999999999976432
Q ss_pred CCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCcccc
Q 003278 672 NDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAE 751 (834)
Q Consensus 672 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (834)
.. ......||..|||||++.+..++.++|||||||+||||+||+.||......... ....... . ....
T Consensus 155 ~~--------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~-~~~~~~~-~-~~~~- 222 (285)
T cd05631 155 GE--------TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKR-EEVDRRV-K-EDQE- 222 (285)
T ss_pred CC--------eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhH-HHHHHHh-h-cccc-
Confidence 21 112357999999999999999999999999999999999999999754332111 1111000 0 0000
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCC-----hhHHHH
Q 003278 752 LVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPS-----MRQILS 792 (834)
Q Consensus 752 ~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPt-----m~~v~~ 792 (834)
.....++ . .+..++.+||..||++||+ ++++++
T Consensus 223 ----~~~~~~s-~---~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 223 ----EYSEKFS-E---DAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred ----cCCccCC-H---HHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 0111122 2 3445566899999999997 677765
No 60
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=3.3e-39 Score=361.09 Aligned_cols=264 Identities=26% Similarity=0.378 Sum_probs=202.4
Q ss_pred cCCCCCCCeeeccCCeEEEEEEE-----CCCCeEEEEEEecccC-hhhHHHHHHHHHHHHhC-CCCceeeEeeeEEeCCE
Q 003278 110 SNGFDEDEVLGSGGFGKVYRAVL-----PSDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHL-RHRNLVRLRGWCVHEDQ 182 (834)
Q Consensus 110 t~~f~~~~~LG~G~fG~Vy~~~~-----~~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~~ 182 (834)
.++|+..+.||+|+||.||+|.+ ..++..||||+++... ....+.+.+|+.++..+ +|||||+++|+|...+.
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 45688899999999999999974 2456789999986432 33456788999999999 89999999999999999
Q ss_pred EEEEEEccCCCCHhHHHhcCCCc---------------------------------------------------------
Q 003278 183 LLLVYDYMPNRSLDRVLFRRPEN--------------------------------------------------------- 205 (834)
Q Consensus 183 ~~lV~Ey~~~gsL~~~l~~~~~~--------------------------------------------------------- 205 (834)
.++|||||++|+|.+++......
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 99999999999999998653210
Q ss_pred -----------cccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhhhh
Q 003278 206 -----------LEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQY 274 (834)
Q Consensus 206 -----------~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~ 274 (834)
......++|..+..|+.||++||.|||+. +|+||||||+|||++.++.+||+|||+++.+......
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 00123689999999999999999999985 9999999999999999999999999999754322100
Q ss_pred hhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCccchHHHHHHHH
Q 003278 275 QMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQIILLDWIRRL 353 (834)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~~l~~~~~~~ 353 (834)
.......++..|+|||.+... .++.++|||||||++|||+| |..|+...... ..+..++
T Consensus 271 --------------~~~~~~~~~~~y~aPE~~~~~-~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~--~~~~~~~--- 330 (375)
T cd05104 271 --------------VVKGNARLPVKWMAPESIFNC-VYTFESDVWSYGILLWEIFSLGSSPYPGMPVD--SKFYKMI--- 330 (375)
T ss_pred --------------cccCCCCCCcceeChhHhcCC-CCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch--HHHHHHH---
Confidence 001223356789999998654 67999999999999999998 88887543221 1122221
Q ss_pred hhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhc
Q 003278 354 SDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSG 407 (834)
Q Consensus 354 ~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~ 407 (834)
..+.... .+. . ....+.+|+..||+.||++||+|.+|++.|+.
T Consensus 331 -~~~~~~~--~~~-----~---~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 331 -KEGYRML--SPE-----C---APSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred -HhCccCC--CCC-----C---CCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 1111110 010 0 12457899999999999999999999999874
No 61
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-39 Score=360.15 Aligned_cols=269 Identities=29% Similarity=0.479 Sum_probs=215.1
Q ss_pred ccccHHHHHhhcCC---------CCCCCeeeccCCeEEEEEEECCCC---eEEEEEEeccc-ChhhHHHHHHHHHHHHhC
Q 003278 99 RIFSYAELYIGSNG---------FDEDEVLGSGGFGKVYRAVLPSDG---TVVAVKCLAEK-GERFEKTFAAELVAVAHL 165 (834)
Q Consensus 99 ~~f~~~el~~~t~~---------f~~~~~LG~G~fG~Vy~~~~~~~g---~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l 165 (834)
..++|++=-.|... -.+.++||.|.||+||+|+++..| ..||||.++.- .++.+.+|+.|..+|.+.
T Consensus 608 DP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQF 687 (996)
T KOG0196|consen 608 DPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQF 687 (996)
T ss_pred CCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccC
Confidence 34666664444433 355689999999999999998666 46999999753 456678899999999999
Q ss_pred CCCceeeEeeeEEeCCEEEEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCC
Q 003278 166 RHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVK 245 (834)
Q Consensus 166 ~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlK 245 (834)
+||||++|.|.........+|.|||+||+|+.+|..+. +.++|.+...++++||.|+.||-++ ++|||||.
T Consensus 688 dHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~D------GqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLA 758 (996)
T KOG0196|consen 688 DHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQND------GQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLA 758 (996)
T ss_pred CCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcC------CceEeehHHHHHHHHHHHhHHHhhc---Cchhhhhh
Confidence 99999999999999999999999999999999997653 4588999999999999999999996 99999999
Q ss_pred CCceEECCCCceEEeeccchhhhhhhhhhhhhcccccccccccccceeeec--cccCCCccccccCCCCCcccceeehhh
Q 003278 246 TSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGG--TIGYLPPESFQKGSVATAKSDVFSFGI 323 (834)
Q Consensus 246 p~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G--t~~Y~aPE~~~~~~~~~~ksDV~SfGv 323 (834)
..|||++.+..+||+||||+|.++++.. ...++..| ...|.|||.+... .+|..||||||||
T Consensus 759 ARNILVNsnLvCKVsDFGLSRvledd~~---------------~~ytt~GGKIPiRWTAPEAIa~R-KFTsASDVWSyGI 822 (996)
T KOG0196|consen 759 ARNILVNSNLVCKVSDFGLSRVLEDDPE---------------AAYTTLGGKIPIRWTAPEAIAYR-KFTSASDVWSYGI 822 (996)
T ss_pred hhheeeccceEEEeccccceeecccCCC---------------ccccccCCccceeecChhHhhhc-ccCchhhccccce
Confidence 9999999999999999999998765531 11223333 3789999999766 6799999999999
Q ss_pred HHHHHHh-CCccCCCCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHH
Q 003278 324 VVLEVVS-GRRAVDLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVI 402 (834)
Q Consensus 324 vl~Ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~ 402 (834)
|+||.++ |.+|+-.....+ -+..+ .+|- ||+ .++.....|.+|++.||+.|...||.+.+++
T Consensus 823 VmWEVmSyGERPYWdmSNQd------VIkaI-e~gy-------RLP---pPmDCP~aL~qLMldCWqkdR~~RP~F~qiV 885 (996)
T KOG0196|consen 823 VMWEVMSYGERPYWDMSNQD------VIKAI-EQGY-------RLP---PPMDCPAALYQLMLDCWQKDRNRRPKFAQIV 885 (996)
T ss_pred EEEEecccCCCcccccchHH------HHHHH-Hhcc-------CCC---CCCCCcHHHHHHHHHHHHHHhhcCCCHHHHH
Confidence 9999876 888864332221 12211 2221 221 1233446799999999999999999999999
Q ss_pred HHhhcCC
Q 003278 403 EAVSGSY 409 (834)
Q Consensus 403 ~~l~~~~ 409 (834)
..|.+..
T Consensus 886 ~~lDklI 892 (996)
T KOG0196|consen 886 STLDKLI 892 (996)
T ss_pred HHHHHHh
Confidence 9998754
No 62
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=1.8e-39 Score=344.53 Aligned_cols=249 Identities=30% Similarity=0.502 Sum_probs=189.5
Q ss_pred CcccccCCcEEEEEEEC-----CCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEeccC
Q 003278 519 QRVAEMDFGTAYQGFLD-----NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSA 593 (834)
Q Consensus 519 ~~ig~g~~g~vy~~~~~-----~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~ 593 (834)
+.||+|.||.||+|.+. .+..|+||.++........+.|.+|++.+++++||||++++|+|...+..++||||++
T Consensus 5 ~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~~ 84 (259)
T PF07714_consen 5 KQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYCP 84 (259)
T ss_dssp EEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--T
T ss_pred eEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccccc
Confidence 56999999999999986 2567999999766566667889999999999999999999999998888999999999
Q ss_pred CCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCC
Q 003278 594 TRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRND 673 (834)
Q Consensus 594 ~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~ 673 (834)
+|+|.++|.... ...++|..+..|+.|||+||+|||+ .+|+|+||+++|||+++++.+||+|||++.......
T Consensus 85 ~g~L~~~L~~~~----~~~~~~~~~~~i~~~i~~~l~~Lh~---~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~ 157 (259)
T PF07714_consen 85 GGSLDDYLKSKN----KEPLSEQQRLSIAIQIAEALSYLHS---NNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKS 157 (259)
T ss_dssp TEBHHHHHHHTC----TTTSBHHHHHHHHHHHHHHHHHHHH---TTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSS
T ss_pred cccccccccccc----ccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccc
Confidence 999999998762 1348999999999999999999997 589999999999999999999999999997652221
Q ss_pred CCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcCccccc
Q 003278 674 HGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRPLAEL 752 (834)
Q Consensus 674 ~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (834)
.. .......+...|+|||.+....++.++||||||+++|||+| |+.|+... ....+...+.. ..+. .
T Consensus 158 ~~-----~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~-~~~~~~~~~~~---~~~~--~- 225 (259)
T PF07714_consen 158 KY-----KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY-DNEEIIEKLKQ---GQRL--P- 225 (259)
T ss_dssp SE-----EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS-CHHHHHHHHHT---TEET--T-
T ss_pred cc-----cccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccc---cccc--e-
Confidence 11 11122346778999999999999999999999999999999 66776543 22222222211 1110 0
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHH
Q 003278 753 VDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSIL 794 (834)
Q Consensus 753 ~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L 794 (834)
.. ...+.. +.+++.+||+.||++||||.+|++.|
T Consensus 226 ----~~-~~~~~~---~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 226 ----IP-DNCPKD---IYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ----SB-TTSBHH---HHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ----ec-cchhHH---HHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 00 111233 44566699999999999999999886
No 63
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.4e-40 Score=320.04 Aligned_cols=249 Identities=26% Similarity=0.401 Sum_probs=204.4
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC---hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVY 187 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 187 (834)
++|+..+.||+|-||.||.|+.+.++-+||+|++.+.. .....++.+|+++-+.|+||||+++||||.+....||++
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLil 101 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLIL 101 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEE
Confidence 56999999999999999999999999999999986542 345678999999999999999999999999999999999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhh
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARW 267 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 267 (834)
||.++|+|...|...+ ...++......++.|+|.||.|+|. ++||||||||+|+|++.++.+|++|||-+-.
T Consensus 102 Eya~~gel~k~L~~~~-----~~~f~e~~~a~Yi~q~A~Al~y~h~---k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~ 173 (281)
T KOG0580|consen 102 EYAPRGELYKDLQEGR-----MKRFDEQRAATYIKQLANALLYCHL---KRVIHRDIKPENLLLGSAGELKIADFGWSVH 173 (281)
T ss_pred EecCCchHHHHHHhcc-----cccccccchhHHHHHHHHHHHHhcc---CCcccCCCCHHHhccCCCCCeeccCCCceee
Confidence 9999999999997543 2456666777899999999999998 4999999999999999999999999998753
Q ss_pred hhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHH
Q 003278 268 LEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347 (834)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~ 347 (834)
-. .....+.+||..|.|||.... ..++.++|+|++||+.||++.|.+||+....+ ...
T Consensus 174 ~p------------------~~kR~tlcgt~dyl~pEmv~~-~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~---etY 231 (281)
T KOG0580|consen 174 AP------------------SNKRKTLCGTLDYLPPEMVEG-RGHDKFVDLWSLGVLCYEFLVGLPPFESQSHS---ETY 231 (281)
T ss_pred cC------------------CCCceeeecccccCCHhhcCC-CCccchhhHHHHHHHHHHHHhcCCchhhhhhH---HHH
Confidence 21 112577899999999998864 46799999999999999999999999754311 122
Q ss_pred HHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 348 DWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 348 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
.-++. .+..+|.. . .....+++..|+..+|.+|.+..||++.
T Consensus 232 krI~k-------~~~~~p~~----i----s~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 232 KRIRK-------VDLKFPST----I----SGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred HHHHH-------ccccCCcc----c----ChhHHHHHHHHhccCccccccHHHHhhh
Confidence 21211 11112211 1 1346789999999999999999999874
No 64
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=8.6e-39 Score=340.60 Aligned_cols=255 Identities=23% Similarity=0.304 Sum_probs=199.4
Q ss_pred hCcCcCCcccccCCcEEEEEEEC----CCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLD----NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVI 588 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv 588 (834)
++|...+.||+|+||.||+|.+. .+..||+|.++..........|.+|+.++.+++|||||+++|++...+..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 35666788999999999999863 35689999988665555557899999999999999999999999999999999
Q ss_pred EeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccc
Q 003278 589 YDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEF 668 (834)
Q Consensus 589 ~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~ 668 (834)
|||+++|+|.+++.... ..++|..++.++.|++.||+|||+ .+++||||||+|||++.++.+|++|||++..
T Consensus 85 ~e~~~~~~L~~~l~~~~-----~~l~~~~~~~~~~~i~~al~~lH~---~~iiH~dikp~nili~~~~~~~l~dfg~~~~ 156 (266)
T cd05064 85 TEYMSNGALDSFLRKHE-----GQLVAGQLMGMLPGLASGMKYLSE---MGYVHKGLAAHKVLVNSDLVCKISGFRRLQE 156 (266)
T ss_pred EEeCCCCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEeeccccHhhEEEcCCCcEEECCCccccc
Confidence 99999999999986532 247899999999999999999996 6899999999999999999999999998764
Q ss_pred cccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcC
Q 003278 669 LTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKR 747 (834)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~ 747 (834)
..... ........+|..|+|||++.++.++.++|||||||++||+++ |+.|+....... +..... ....
T Consensus 157 ~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~-~~~~~~---~~~~ 226 (266)
T cd05064 157 DKSEA------IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD-VIKAVE---DGFR 226 (266)
T ss_pred ccccc------hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH-HHHHHH---CCCC
Confidence 32111 011112345678999999999999999999999999999775 999986443322 222111 1100
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHcc
Q 003278 748 PLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDG 796 (834)
Q Consensus 748 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~ 796 (834)
....... + ..+.+++.+||+.+|++|||+.+|.+.|+.
T Consensus 227 -------~~~~~~~-~---~~~~~li~~c~~~~p~~RP~~~~i~~~l~~ 264 (266)
T cd05064 227 -------LPAPRNC-P---NLLHQLMLDCWQKERGERPRFSQIHSILSK 264 (266)
T ss_pred -------CCCCCCC-C---HHHHHHHHHHcCCCchhCCCHHHHHHHHHh
Confidence 0111111 2 245566679999999999999999998864
No 65
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-39 Score=352.09 Aligned_cols=249 Identities=22% Similarity=0.361 Sum_probs=199.1
Q ss_pred hCcCcCCcccccCCcEEEEEE-ECCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEec
Q 003278 513 NNFSESQRVAEMDFGTAYQGF-LDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY 591 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey 591 (834)
..|..-.+||+|+-|.||.+. ..+++.||||++.....+. ++-..+|+.+|+..+|+|||+++..|...+++++||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~-keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEy 351 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPK-KELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEY 351 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCc-hhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEee
Confidence 345556789999999999998 5668899999987654332 35578999999999999999999998888999999999
Q ss_pred cCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccccc
Q 003278 592 SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTR 671 (834)
Q Consensus 592 ~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~ 671 (834)
|.+|+|.+.+.+. .+++.+...|.++++.||+|||. .+|||||||++||||+.++.+||+|||++..+..
T Consensus 352 m~ggsLTDvVt~~-------~~~E~qIA~Icre~l~aL~fLH~---~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~ 421 (550)
T KOG0578|consen 352 MEGGSLTDVVTKT-------RMTEGQIAAICREILQGLKFLHA---RGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISE 421 (550)
T ss_pred cCCCchhhhhhcc-------cccHHHHHHHHHHHHHHHHHHHh---cceeeeccccceeEeccCCcEEEeeeeeeecccc
Confidence 9999999887542 48888889999999999999996 7999999999999999999999999999987654
Q ss_pred CCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCcccc
Q 003278 672 NDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAE 751 (834)
Q Consensus 672 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (834)
.. ....+.+||+.|||||++....|+.|+||||||++++||+-|+.||-.+.|-..+.. + .....+ +
T Consensus 422 ~~-------~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyL-I---a~ng~P--~ 488 (550)
T KOG0578|consen 422 EQ-------SKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-I---ATNGTP--K 488 (550)
T ss_pred cc-------CccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHH-H---hhcCCC--C
Confidence 32 234568999999999999999999999999999999999999999876544322111 1 111111 1
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 752 LVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 752 ~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
+-.+ +--..++.+++ .+|++.||++||++.|+++
T Consensus 489 lk~~----~klS~~~kdFL---~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 489 LKNP----EKLSPELKDFL---DRCLVVDVEQRASAKELLE 522 (550)
T ss_pred cCCc----cccCHHHHHHH---HHHhhcchhcCCCHHHHhc
Confidence 1111 01123444444 4899999999999999985
No 66
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=6.4e-39 Score=353.29 Aligned_cols=254 Identities=21% Similarity=0.275 Sum_probs=200.9
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC---hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVY 187 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 187 (834)
++|+..+.||+|+||.||+|++..+|+.||||++.... ....+.+.+|+.++.+++||||+++++++...+..|+||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36888999999999999999998889999999986532 233466889999999999999999999999999999999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhh
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARW 267 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 267 (834)
||+++|+|.+++... ..+++.....++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 81 e~~~g~~L~~~l~~~-------~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~ 150 (333)
T cd05600 81 EYVPGGDFRTLLNNL-------GVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKG 150 (333)
T ss_pred eCCCCCCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCcc
Confidence 999999999998643 3588899999999999999999985 999999999999999999999999999975
Q ss_pred hhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHH
Q 003278 268 LEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347 (834)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~ 347 (834)
... ......||+.|+|||++... .++.++|||||||++|||+||+.||......+ ..
T Consensus 151 ~~~-------------------~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~ell~g~~pf~~~~~~~---~~ 207 (333)
T cd05600 151 IVT-------------------YANSVVGSPDYMAPEVLRGK-GYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNE---TW 207 (333)
T ss_pred ccc-------------------ccCCcccCccccChhHhcCC-CCCCccceecchHHHhhhhhCCCCCCCCCHHH---HH
Confidence 321 12345699999999998655 67999999999999999999999986532211 11
Q ss_pred HHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 348 DWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 348 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
. .+......... +...+.. ......+.++...||..+|.+||++.++++.
T Consensus 208 ~---~i~~~~~~~~~--~~~~~~~--~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 208 E---NLKYWKETLQR--PVYDDPR--FNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred H---HHHhccccccC--CCCCccc--cccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 1 11110111110 0000000 0112356788899999999999999999864
No 67
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2.3e-38 Score=396.93 Aligned_cols=269 Identities=24% Similarity=0.455 Sum_probs=219.0
Q ss_pred cccHHHHHhhcCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEe
Q 003278 100 IFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVH 179 (834)
Q Consensus 100 ~f~~~el~~~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~ 179 (834)
.+++.++. ..|...++||+|+||.||+|....+|..||||.+...... ...|+..+++++|||||+++|+|.+
T Consensus 682 ~~~~~~~~---~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~ 754 (968)
T PLN00113 682 SITINDIL---SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRS 754 (968)
T ss_pred hhhHHHHH---hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEc
Confidence 45666654 4577889999999999999999889999999998654321 2346889999999999999999999
Q ss_pred CCEEEEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEE
Q 003278 180 EDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARL 259 (834)
Q Consensus 180 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl 259 (834)
.+..++||||+++|+|.++++ .++|..+.+|+.|+|+||+|||..+.++|+||||||+|||++.++.+++
T Consensus 755 ~~~~~lv~Ey~~~g~L~~~l~----------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~ 824 (968)
T PLN00113 755 EKGAYLIHEYIEGKNLSEVLR----------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHL 824 (968)
T ss_pred CCCCEEEEeCCCCCcHHHHHh----------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEE
Confidence 999999999999999999984 2789999999999999999999877789999999999999999988887
Q ss_pred eeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCC
Q 003278 260 GDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTY 339 (834)
Q Consensus 260 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~ 339 (834)
. ||.+..... .+...||++|||||++... .++.|+|||||||++|||+||+.|++...
T Consensus 825 ~-~~~~~~~~~--------------------~~~~~~t~~y~aPE~~~~~-~~~~~sDv~S~Gvvl~el~tg~~p~~~~~ 882 (968)
T PLN00113 825 R-LSLPGLLCT--------------------DTKCFISSAYVAPETRETK-DITEKSDIYGFGLILIELLTGKSPADAEF 882 (968)
T ss_pred E-ecccccccc--------------------CCCccccccccCcccccCC-CCCcccchhhHHHHHHHHHhCCCCCCccc
Confidence 6 665542110 1223589999999998654 67999999999999999999999986543
Q ss_pred CCccchHHHHHHHHhhcCccccccccccCCC-CCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcC
Q 003278 340 PDDQIILLDWIRRLSDEGKVLQAGDNRLSDG-SYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGS 408 (834)
Q Consensus 340 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~ 408 (834)
. ....+..|++...........+|+.+... .....++..+.+++.+||+.+|++||+|.+|+++|+..
T Consensus 883 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~ 951 (968)
T PLN00113 883 G-VHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESA 951 (968)
T ss_pred C-CCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHh
Confidence 3 23457788876665555555666665422 23456677888999999999999999999999999864
No 68
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=4.2e-39 Score=359.92 Aligned_cols=265 Identities=26% Similarity=0.434 Sum_probs=202.0
Q ss_pred cCCCCCCCeeeccCCeEEEEEEECC-----CCeEEEEEEecccC-hhhHHHHHHHHHHHHhC-CCCceeeEeeeEEeCCE
Q 003278 110 SNGFDEDEVLGSGGFGKVYRAVLPS-----DGTVVAVKCLAEKG-ERFEKTFAAELVAVAHL-RHRNLVRLRGWCVHEDQ 182 (834)
Q Consensus 110 t~~f~~~~~LG~G~fG~Vy~~~~~~-----~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~~ 182 (834)
.++|+..+.||+|+||.||+|+... ++..||||++.... ....+.+.+|+.+++.+ +|||||+++|+|...+.
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP 116 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence 3568889999999999999998643 33579999987542 33456788999999999 89999999999999999
Q ss_pred EEEEEEccCCCCHhHHHhcCCCc---------------------------------------------------------
Q 003278 183 LLLVYDYMPNRSLDRVLFRRPEN--------------------------------------------------------- 205 (834)
Q Consensus 183 ~~lV~Ey~~~gsL~~~l~~~~~~--------------------------------------------------------- 205 (834)
.++||||+++|+|.+++......
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence 99999999999999998643210
Q ss_pred ------cccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhhhhhhhcc
Q 003278 206 ------LEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTS 279 (834)
Q Consensus 206 ------~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~ 279 (834)
.....+++|....+|+.|+++||.|||+. +|+||||||+|||+++++.+||+|||+++.+......
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~----- 268 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNY----- 268 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcce-----
Confidence 01123589999999999999999999985 9999999999999999999999999999754321100
Q ss_pred cccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCccchHHHHHHHHhhcCc
Q 003278 280 SARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQIILLDWIRRLSDEGK 358 (834)
Q Consensus 280 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~ 358 (834)
.......+++.|||||++..+ .++.++|||||||++|||+| |+.||....... .+. .....+.
T Consensus 269 ---------~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~--~~~----~~~~~~~ 332 (374)
T cd05106 269 ---------VVKGNARLPVKWMAPESIFDC-VYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS--KFY----KMVKRGY 332 (374)
T ss_pred ---------eeccCCCCccceeCHHHhcCC-CCCccccHHHHHHHHHHHHhCCCCCCccccccH--HHH----HHHHccc
Confidence 001223356789999998654 67999999999999999997 999986432221 111 1111111
Q ss_pred cccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcC
Q 003278 359 VLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGS 408 (834)
Q Consensus 359 ~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~ 408 (834)
....+ .. ....+.+++..||+.||.+||++.+|++.|+..
T Consensus 333 --~~~~~-----~~---~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 333 --QMSRP-----DF---APPEIYSIMKMCWNLEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred --CccCC-----CC---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 00000 00 124578899999999999999999999998753
No 69
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.1e-38 Score=339.77 Aligned_cols=256 Identities=25% Similarity=0.384 Sum_probs=200.2
Q ss_pred cCCCCCCCeeeccCCeEEEEEEEC---CCCeEEEEEEecccC-hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEE
Q 003278 110 SNGFDEDEVLGSGGFGKVYRAVLP---SDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLL 185 (834)
Q Consensus 110 t~~f~~~~~LG~G~fG~Vy~~~~~---~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 185 (834)
.++|+..+.||+|+||.||+|.+. ..+..||+|.++... ......|.+|+.++.+++||||++++|++...+..++
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 83 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI 83 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence 356888899999999999999874 346789999987542 3345679999999999999999999999999999999
Q ss_pred EEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccch
Q 003278 186 VYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLA 265 (834)
Q Consensus 186 V~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 265 (834)
||||+++|+|.+++... ...++|..++.++.|++.||+|||+. +++||||||+|||++.++.+|++|||++
T Consensus 84 v~e~~~~~~L~~~l~~~------~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~ 154 (266)
T cd05064 84 VTEYMSNGALDSFLRKH------EGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRL 154 (266)
T ss_pred EEEeCCCCcHHHHHHhC------CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCccc
Confidence 99999999999998653 23689999999999999999999985 9999999999999999999999999987
Q ss_pred hhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCccc
Q 003278 266 RWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQI 344 (834)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~ 344 (834)
........ .......+|..|+|||.+..+ .++.++|||||||++||+++ |+.||......
T Consensus 155 ~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~--- 215 (266)
T cd05064 155 QEDKSEAI---------------YTTMSGKSPVLWAAPEAIQYH-HFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ--- 215 (266)
T ss_pred ccccccch---------------hcccCCCCceeecCHHHHhhC-CccchhHHHHHHHHHHHHhcCCCCCcCcCCHH---
Confidence 64321100 001122356889999988654 67899999999999999775 99998643211
Q ss_pred hHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhc
Q 003278 345 ILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSG 407 (834)
Q Consensus 345 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~ 407 (834)
.+.. .+ .++.... .. .. ....+.+++..||+.+|.+||++.++.+.|..
T Consensus 216 ~~~~---~~-~~~~~~~-----~~-~~----~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~ 264 (266)
T cd05064 216 DVIK---AV-EDGFRLP-----AP-RN----CPNLLHQLMLDCWQKERGERPRFSQIHSILSK 264 (266)
T ss_pred HHHH---HH-HCCCCCC-----CC-CC----CCHHHHHHHHHHcCCCchhCCCHHHHHHHHHh
Confidence 1111 11 1221111 10 11 12457889999999999999999999998865
No 70
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.2e-38 Score=350.46 Aligned_cols=239 Identities=23% Similarity=0.362 Sum_probs=193.7
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC---hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVY 187 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 187 (834)
++|+..+.||+|+||.||+|++..+|+.||||++.... ....+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 56888899999999999999998899999999986431 233456889999999999999999999999999999999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhh
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARW 267 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 267 (834)
||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 98 e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 167 (329)
T PTZ00263 98 EFVVGGELFTHLRKA-------GRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKK 167 (329)
T ss_pred cCCCCChHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceE
Confidence 999999999998643 3578888999999999999999986 999999999999999999999999999975
Q ss_pred hhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHH
Q 003278 268 LEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347 (834)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~ 347 (834)
+... .....||+.|+|||.+... .++.++|||||||++|||+||+.||..... .
T Consensus 168 ~~~~-------------------~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~elltg~~pf~~~~~---~--- 221 (329)
T PTZ00263 168 VPDR-------------------TFTLCGTPEYLAPEVIQSK-GHGKAVDWWTMGVLLYEFIAGYPPFFDDTP---F--- 221 (329)
T ss_pred cCCC-------------------cceecCChhhcCHHHHcCC-CCCCcceeechHHHHHHHHcCCCCCCCCCH---H---
Confidence 4211 2335699999999998654 568999999999999999999999853211 1
Q ss_pred HHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCc
Q 003278 348 DWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPS 397 (834)
Q Consensus 348 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs 397 (834)
...... .++.. .+. ...+ ..+.+++..||+.||.+||+
T Consensus 222 ~~~~~i-~~~~~------~~p-~~~~----~~~~~li~~~L~~dP~~R~~ 259 (329)
T PTZ00263 222 RIYEKI-LAGRL------KFP-NWFD----GRARDLVKGLLQTDHTKRLG 259 (329)
T ss_pred HHHHHH-hcCCc------CCC-CCCC----HHHHHHHHHHhhcCHHHcCC
Confidence 111111 11211 010 1111 35678999999999999997
No 71
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.7e-38 Score=348.20 Aligned_cols=202 Identities=25% Similarity=0.413 Sum_probs=175.3
Q ss_pred hcCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc-ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEE
Q 003278 109 GSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVY 187 (834)
Q Consensus 109 ~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 187 (834)
..++|+..+.||+|+||.||+|.+..+|..+|+|.+... .......+.+|+.++.+++|||||+++++|.+.+..++||
T Consensus 3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (333)
T cd06650 3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (333)
T ss_pred chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEE
Confidence 347899999999999999999999889999999988654 3344567899999999999999999999999999999999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhh
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARW 267 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 267 (834)
||+++|+|.+++... ..+++.....++.|++.||.|||+. .+|+||||||+|||++.++.+||+|||+++.
T Consensus 83 e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~ 153 (333)
T cd06650 83 EHMDGGSLDQVLKKA-------GRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 153 (333)
T ss_pred ecCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCCCCEEEeeCCcchh
Confidence 999999999998643 3578889999999999999999974 3799999999999999999999999999875
Q ss_pred hhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCC
Q 003278 268 LEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLT 338 (834)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~ 338 (834)
+.... .....||+.|+|||.+... .++.++|||||||++|||++|+.||...
T Consensus 154 ~~~~~------------------~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~il~~l~~g~~p~~~~ 205 (333)
T cd06650 154 LIDSM------------------ANSFVGTRSYMSPERLQGT-HYSVQSDIWSMGLSLVEMAIGRYPIPPP 205 (333)
T ss_pred hhhhc------------------cccCCCCccccCHHHhcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 42210 1234689999999988644 6789999999999999999999998643
No 72
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.2e-38 Score=358.13 Aligned_cols=263 Identities=21% Similarity=0.306 Sum_probs=202.4
Q ss_pred hCcCcCCcccccCCcEEEEEEECC------CcEEEEEEecCCCChhHHHHHHHHHHHHHhcc-CCCceeEEEEEeeCCeE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLDN------HQYVLVKRLGMSKCPALRTRFSNELQNLARLR-HRNLVQLCGWCTEQGEM 585 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~~------~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~-HpNiv~l~g~~~~~~~~ 585 (834)
+.|...++||+|+||.||+|.... +..||||++.........+.|.+|+++|+++. |||||+++|+|.+.+..
T Consensus 37 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~ 116 (400)
T cd05105 37 DGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPI 116 (400)
T ss_pred cceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCce
Confidence 456667889999999999998522 24699999976555555678999999999996 99999999999999999
Q ss_pred EEEEeccCCCchhhhhhcCCCC----------------------------------------------------------
Q 003278 586 LVIYDYSATRILSHLLFHNNHR---------------------------------------------------------- 607 (834)
Q Consensus 586 ~lv~Ey~~~g~L~~~l~~~~~~---------------------------------------------------------- 607 (834)
+|||||+++|+|.++|......
T Consensus 117 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (400)
T cd05105 117 YIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKE 196 (400)
T ss_pred EEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhh
Confidence 9999999999999988653210
Q ss_pred --------------------------------CCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCC
Q 003278 608 --------------------------------IGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPD 655 (834)
Q Consensus 608 --------------------------------~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~ 655 (834)
.....++|..++.++.|+++||+|||+ .+|+||||||+|||++++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dikp~Nill~~~ 273 (400)
T cd05105 197 ASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS---KNCVHRDLAARNVLLAQG 273 (400)
T ss_pred hhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHhEEEeCC
Confidence 001247888899999999999999996 689999999999999999
Q ss_pred CCceEeeeeeccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchh
Q 003278 656 MNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGL 734 (834)
Q Consensus 656 ~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~ 734 (834)
+.+||+|||+++.+..... ........|++.|||||++.+..++.++|||||||++|||+| |..|+........
T Consensus 274 ~~~kL~DfGla~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~ 348 (400)
T cd05105 274 KIVKICDFGLARDIMHDSN-----YVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST 348 (400)
T ss_pred CEEEEEeCCcceecccccc-----ccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH
Confidence 9999999999976533211 011223457788999999999999999999999999999997 8888764433322
Q ss_pred HHHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccC
Q 003278 735 LVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGN 797 (834)
Q Consensus 735 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~ 797 (834)
....... ...+ ...... ...+.+++.+||+.||++||||.+|.++|+..
T Consensus 349 ~~~~~~~---~~~~-------~~~~~~----~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l 397 (400)
T cd05105 349 FYNKIKS---GYRM-------AKPDHA----TQEVYDIMVKCWNSEPEKRPSFLHLSDIVESL 397 (400)
T ss_pred HHHHHhc---CCCC-------CCCccC----CHHHHHHHHHHCccCHhHCcCHHHHHHHHHHH
Confidence 2211111 0000 011111 12456677799999999999999999999754
No 73
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-38 Score=348.49 Aligned_cols=249 Identities=20% Similarity=0.301 Sum_probs=196.4
Q ss_pred hhCcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCCC---h-hHHHHHHHHHHHHHhcc-CCCceeEEEEEeeCCeE
Q 003278 512 TNNFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKC---P-ALRTRFSNELQNLARLR-HRNLVQLCGWCTEQGEM 585 (834)
Q Consensus 512 t~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~---~-~~~~~f~~E~~~l~~l~-HpNiv~l~g~~~~~~~~ 585 (834)
.+.|...+.||+|+||+||.|.. ..+..||||.++.... . ...+...+|+.++++++ ||||++++.++.....+
T Consensus 16 ~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~ 95 (370)
T KOG0583|consen 16 IGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKI 95 (370)
T ss_pred cCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeE
Confidence 35667778899999999999974 5679999997765411 1 23455678999999999 99999999999999999
Q ss_pred EEEEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCC-CCceEeeee
Q 003278 586 LVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPD-MNPRLGSFA 664 (834)
Q Consensus 586 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~-~~~ki~DfG 664 (834)
++||||+.+|+|.+++...+ .+.+....+++.|++.|++|||+ .+|+||||||+|||||.+ +++||+|||
T Consensus 96 ~ivmEy~~gGdL~~~i~~~g------~l~E~~ar~~F~Qlisav~y~H~---~gi~HRDLK~ENilld~~~~~~Kl~DFG 166 (370)
T KOG0583|consen 96 YIVMEYCSGGDLFDYIVNKG------RLKEDEARKYFRQLISAVAYCHS---RGIVHRDLKPENILLDGNEGNLKLSDFG 166 (370)
T ss_pred EEEEEecCCccHHHHHHHcC------CCChHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEecCCCCCEEEeccc
Confidence 99999999999999998733 26667778899999999999996 799999999999999999 999999999
Q ss_pred eccccccCCCCCcccccCccccccccCccchhccccCC-CC-ccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHH
Q 003278 665 LAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGE-AT-SMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEF 742 (834)
Q Consensus 665 la~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~-~~-~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~ 742 (834)
++...... .....+.+||+.|+|||++.+.. |+ .++||||+||+||-|++|..||+.......... .
T Consensus 167 ~s~~~~~~-------~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~k----i 235 (370)
T KOG0583|consen 167 LSAISPGE-------DGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRK----I 235 (370)
T ss_pred cccccCCC-------CCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHH----H
Confidence 99876311 11234679999999999999877 87 569999999999999999999986433222211 1
Q ss_pred HhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHH
Q 003278 743 EARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQIL 791 (834)
Q Consensus 743 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~ 791 (834)
....-.+...++ .. .+..+..+|+..||..|+|+.+|+
T Consensus 236 ~~~~~~~p~~~~--------S~---~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 236 RKGEFKIPSYLL--------SP---EARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred hcCCccCCCCcC--------CH---HHHHHHHHHcCCCcccCCCHHHHh
Confidence 111111111110 22 344455589999999999999998
No 74
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=4e-39 Score=347.94 Aligned_cols=245 Identities=22% Similarity=0.283 Sum_probs=196.9
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC---hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVY 187 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 187 (834)
++|+..+.||+|+||.||+|....+|+.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 46888899999999999999998899999999986432 234566889999999999999999999999999999999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhh
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARW 267 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 267 (834)
||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 81 e~~~~~~L~~~~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~ 150 (291)
T cd05612 81 EYVPGGELFSYLRNS-------GRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKK 150 (291)
T ss_pred eCCCCCCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchh
Confidence 999999999998643 3588899999999999999999985 999999999999999999999999999875
Q ss_pred hhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHH
Q 003278 268 LEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347 (834)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~ 347 (834)
+... .....||+.|+|||.+... .++.++|||||||++|||+||+.||......
T Consensus 151 ~~~~-------------------~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~------ 204 (291)
T cd05612 151 LRDR-------------------TWTLCGTPEYLAPEVIQSK-GHNKAVDWWALGILIYEMLVGYPPFFDDNPF------ 204 (291)
T ss_pred ccCC-------------------cccccCChhhcCHHHHcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------
Confidence 4211 2234699999999988654 5789999999999999999999998643211
Q ss_pred HHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCc-----hhhHHH
Q 003278 348 DWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPS-----MKWVIE 403 (834)
Q Consensus 348 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs-----m~~V~~ 403 (834)
....... .+.. .+. ... ...+.++...||+.||.+||+ +.++++
T Consensus 205 ~~~~~i~-~~~~------~~~-~~~----~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 205 GIYEKIL-AGKL------EFP-RHL----DLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred HHHHHHH-hCCc------CCC-ccC----CHHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence 1111111 1111 011 111 135778999999999999995 555553
No 75
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=2.2e-38 Score=345.79 Aligned_cols=242 Identities=23% Similarity=0.302 Sum_probs=192.5
Q ss_pred eeccCCeEEEEEEECCCCeEEEEEEeccc---ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEccCCCCH
Q 003278 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEK---GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSL 195 (834)
Q Consensus 119 LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 195 (834)
||+|+||.||+|....+++.||+|++... .......+.+|+.++.+++||||++++++|...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 79999999999999889999999998643 233446688999999999999999999999999999999999999999
Q ss_pred hHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhhhhh
Q 003278 196 DRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQ 275 (834)
Q Consensus 196 ~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~~ 275 (834)
.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~~~l~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--- 147 (312)
T cd05585 81 FHHLQRE-------GRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD--- 147 (312)
T ss_pred HHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCC---
Confidence 9998643 3588999999999999999999985 99999999999999999999999999987432110
Q ss_pred hhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHHHHHhh
Q 003278 276 MRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIRRLSD 355 (834)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~~~~~~ 355 (834)
.......||+.|+|||.+... .++.++|||||||++|||+||+.||.... ..........
T Consensus 148 -------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~pf~~~~------~~~~~~~~~~ 207 (312)
T cd05585 148 -------------DKTNTFCGTPEYLAPELLLGH-GYTKAVDWWTLGVLLYEMLTGLPPFYDEN------VNEMYRKILQ 207 (312)
T ss_pred -------------CccccccCCcccCCHHHHcCC-CCCCccceechhHHHHHHHhCCCCcCCCC------HHHHHHHHHc
Confidence 112345799999999988654 67999999999999999999999986421 1122222211
Q ss_pred cCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHh
Q 003278 356 EGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAV 405 (834)
Q Consensus 356 ~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l 405 (834)
. .. .+. ... ...+.+++..||+.||.+||+...+.+.|
T Consensus 208 ~-~~------~~~-~~~----~~~~~~li~~~L~~dp~~R~~~~~~~e~l 245 (312)
T cd05585 208 E-PL------RFP-DGF----DRDAKDLLIGLLSRDPTRRLGYNGAQEIK 245 (312)
T ss_pred C-CC------CCC-CcC----CHHHHHHHHHHcCCCHHHcCCCCCHHHHH
Confidence 1 10 111 111 13577899999999999999765555544
No 76
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.1e-38 Score=349.83 Aligned_cols=242 Identities=25% Similarity=0.292 Sum_probs=192.9
Q ss_pred CeeeccCCeEEEEEEECCCCeEEEEEEecccC---hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEccCCC
Q 003278 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNR 193 (834)
Q Consensus 117 ~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 193 (834)
+.||+|+||.||+|....+|+.||||++.... ......+.+|+.++.+++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 47999999999999998999999999986532 233456788999999999999999999999999999999999999
Q ss_pred CHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhhh
Q 003278 194 SLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQ 273 (834)
Q Consensus 194 sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~ 273 (834)
+|..++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~L~~~l~~~-------~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~-- 148 (323)
T cd05571 81 ELFFHLSRE-------RVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD-- 148 (323)
T ss_pred cHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC--
Confidence 999888643 3688999999999999999999985 9999999999999999999999999998742110
Q ss_pred hhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHHHHH
Q 003278 274 YQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIRRL 353 (834)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~~~~ 353 (834)
........||+.|+|||.+... .++.++|||||||++|||+||+.||.... ...+...+
T Consensus 149 --------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~Pf~~~~---~~~~~~~~--- 207 (323)
T cd05571 149 --------------GATMKTFCGTPEYLAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGRLPFYNQD---HEKLFELI--- 207 (323)
T ss_pred --------------CCcccceecCccccChhhhcCC-CCCccccCcccchhhhhhhcCCCCCCCCC---HHHHHHHH---
Confidence 0112346799999999988644 67999999999999999999999985421 11111111
Q ss_pred hhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCC-----chhhHHH
Q 003278 354 SDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRP-----SMKWVIE 403 (834)
Q Consensus 354 ~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RP-----sm~~V~~ 403 (834)
. .+. ..+. ... ...+.++...||+.||++|| +..++++
T Consensus 208 ~-~~~------~~~p-~~~----~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 208 L-MEE------IRFP-RTL----SPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred H-cCC------CCCC-CCC----CHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 1 111 1111 111 23577899999999999999 6777765
No 77
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=2.3e-38 Score=340.22 Aligned_cols=260 Identities=23% Similarity=0.352 Sum_probs=202.7
Q ss_pred CcCcCCcccccCCcEEEEEEECCC------cEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEE
Q 003278 514 NFSESQRVAEMDFGTAYQGFLDNH------QYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLV 587 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~~~~------~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~l 587 (834)
+|...+.||+|+||.||+|..... ..||+|.+..........+|.+|+.++.+++||||+++++++.+.+..++
T Consensus 6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 85 (283)
T cd05048 6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCM 85 (283)
T ss_pred HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEE
Confidence 566678899999999999986432 57999998766556666789999999999999999999999999899999
Q ss_pred EEeccCCCchhhhhhcCCCCC----------CCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCC
Q 003278 588 IYDYSATRILSHLLFHNNHRI----------GHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMN 657 (834)
Q Consensus 588 v~Ey~~~g~L~~~l~~~~~~~----------~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~ 657 (834)
+|||+++|+|.+++....... ....+++...+.++.|++.||+|||+ .+|+||||||+|||+++++.
T Consensus 86 ~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nil~~~~~~ 162 (283)
T cd05048 86 LFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSS---HHFVHRDLAARNCLVGEGLT 162 (283)
T ss_pred EEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccccceEEEcCCCc
Confidence 999999999999987542111 11357888999999999999999997 68999999999999999999
Q ss_pred ceEeeeeeccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHH
Q 003278 658 PRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLV 736 (834)
Q Consensus 658 ~ki~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~ 736 (834)
+||+|||+++........ .......+|+.|||||++.++.++.++|||||||++|||+| |..|+....+.. ..
T Consensus 163 ~~L~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~-~~ 236 (283)
T cd05048 163 VKISDFGLSRDIYSADYY-----RVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE-VI 236 (283)
T ss_pred EEECCCcceeeccccccc-----cccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH-HH
Confidence 999999999764322110 01122356888999999998999999999999999999998 988886543322 21
Q ss_pred HHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHcc
Q 003278 737 KRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDG 796 (834)
Q Consensus 737 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~ 796 (834)
..+. ...... .... .+ .++.+++.+||+.||.+|||+.+|++.|++
T Consensus 237 ~~i~-----~~~~~~-----~~~~-~~---~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 237 EMIR-----SRQLLP-----CPED-CP---ARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HHHH-----cCCcCC-----Cccc-CC---HHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 1111 111111 1111 12 345566679999999999999999999975
No 78
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-40 Score=343.64 Aligned_cols=248 Identities=23% Similarity=0.398 Sum_probs=204.1
Q ss_pred CcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEecc
Q 003278 514 NFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYS 592 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~ 592 (834)
-|....+||.|.||.||||.. ..+..||+|.++.+......+...+|+.+|+.++||||.++||.+.....++++||||
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~ 93 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC 93 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence 456668899999999999995 4578899999998877776778899999999999999999999999999999999999
Q ss_pred CCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccC
Q 003278 593 ATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRN 672 (834)
Q Consensus 593 ~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~ 672 (834)
.+|++.++|.... .++.....-|++++..||.|||+ .+.||||||+.|||+..+|.+|++|||++..++..
T Consensus 94 ~gGsv~~lL~~~~------~~~E~~i~~ilre~l~~l~ylH~---~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~ 164 (467)
T KOG0201|consen 94 GGGSVLDLLKSGN------ILDEFEIAVILREVLKGLDYLHS---EKKIHRDIKAANILLSESGDVKLADFGVAGQLTNT 164 (467)
T ss_pred cCcchhhhhccCC------CCccceeeeehHHHHHHhhhhhh---cceecccccccceeEeccCcEEEEecceeeeeech
Confidence 9999999986543 23444445589999999999997 68999999999999999999999999999887654
Q ss_pred CCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCccccc
Q 003278 673 DHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAEL 752 (834)
Q Consensus 673 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (834)
. ....+++||+.|||||++....|+.|+||||+||+.+||++|..|+....|...+.. +.+-
T Consensus 165 ~-------~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlfl-----------Ipk~ 226 (467)
T KOG0201|consen 165 V-------KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFL-----------IPKS 226 (467)
T ss_pred h-------hccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEe-----------ccCC
Confidence 2 123468999999999999988999999999999999999999999876666432211 1111
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 753 VDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 753 ~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
..|.+.+.+. +.+.+++. .|++.||+.|||+.++++
T Consensus 227 ~PP~L~~~~S-~~~kEFV~---~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 227 APPRLDGDFS-PPFKEFVE---ACLDKNPEFRPSAKELLK 262 (467)
T ss_pred CCCccccccC-HHHHHHHH---HHhhcCcccCcCHHHHhh
Confidence 2344555333 34455554 799999999999999985
No 79
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3.7e-38 Score=346.86 Aligned_cols=199 Identities=20% Similarity=0.289 Sum_probs=174.7
Q ss_pred hCcCcCCcccccCCcEEEEEEEC-CCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEec
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY 591 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey 591 (834)
++|...+.||+|+||.||++... ++..+|+|.+.....+...++|.+|+++|++++|||||++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeec
Confidence 57888889999999999999965 57889999987665556667899999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccccc
Q 003278 592 SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTR 671 (834)
Q Consensus 592 ~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~ 671 (834)
+++|+|.+++.... .+++.....++.|++.||.|||+. .+|+||||||+|||++.++.+||+|||++..+..
T Consensus 85 ~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 156 (331)
T cd06649 85 MDGGSLDQVLKEAK------RIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 156 (331)
T ss_pred CCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEcCCCcEEEccCcccccccc
Confidence 99999999986532 377888889999999999999973 4699999999999999999999999999875432
Q ss_pred CCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCC
Q 003278 672 NDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDF 728 (834)
Q Consensus 672 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~ 728 (834)
. ......||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 157 ~---------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 157 S---------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred c---------ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 1 12245799999999999998999999999999999999999999864
No 80
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.2e-38 Score=348.40 Aligned_cols=258 Identities=19% Similarity=0.303 Sum_probs=199.3
Q ss_pred hCcCcCCcccccCCcEEEEEEEC-CCc----EEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLD-NHQ----YVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLV 587 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~-~~~----~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~l 587 (834)
.+|...+.||+|+||.||+|.+. ++. .||||.+.........++|.+|+.+++.++||||++++|+|... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 46888899999999999999853 333 38999987655555567899999999999999999999999874 5679
Q ss_pred EEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecc
Q 003278 588 IYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAE 667 (834)
Q Consensus 588 v~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~ 667 (834)
++||+++|+|.+++..... .+++...+.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++
T Consensus 86 v~e~~~~g~l~~~l~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~---~~iiH~dlkp~Nill~~~~~~kl~DfG~a~ 157 (316)
T cd05108 86 ITQLMPFGCLLDYVREHKD-----NIGSQYLLNWCVQIAKGMNYLEE---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 157 (316)
T ss_pred eeecCCCCCHHHHHHhccc-----cCCHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEecCCCcEEEccccccc
Confidence 9999999999999875432 37888899999999999999996 689999999999999999999999999998
Q ss_pred ccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhc
Q 003278 668 FLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARK 746 (834)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~ 746 (834)
.+...... .......++..|||||++.+..++.++|||||||++|||+| |+.|+...... ...... ....
T Consensus 158 ~~~~~~~~-----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~-~~~~~~---~~~~ 228 (316)
T cd05108 158 LLGADEKE-----YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-EISSIL---EKGE 228 (316)
T ss_pred cccCCCcc-----eeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHH---hCCC
Confidence 75432210 01112235678999999999999999999999999999998 88888643221 111111 1110
Q ss_pred CccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccCCc
Q 003278 747 RPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGNDK 799 (834)
Q Consensus 747 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~~~ 799 (834)
. ... ..... ..+.+++.+||..+|++||||.+|+..|....+
T Consensus 229 ~----~~~---~~~~~----~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~ 270 (316)
T cd05108 229 R----LPQ---PPICT----IDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 270 (316)
T ss_pred C----CCC---CCCCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence 0 000 01111 245567779999999999999999998875544
No 81
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=9.5e-38 Score=372.29 Aligned_cols=188 Identities=25% Similarity=0.307 Sum_probs=159.0
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc---ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK---GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVY 187 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 187 (834)
++|.+.+.||+|+||.||+|.+..+++.||||++... .......+..|+.++..++||||+++++++...+.+||||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 5788899999999999999999889999999998643 2334567889999999999999999999999999999999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhh
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARW 267 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 267 (834)
||+++++|..++... ..+++...+.|+.||+.||.|||.. +||||||||+|||++.++.+||+|||+++.
T Consensus 84 Ey~~g~~L~~li~~~-------~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~~ 153 (669)
T cd05610 84 EYLIGGDVKSLLHIY-------GYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSKV 153 (669)
T ss_pred eCCCCCCHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCcc
Confidence 999999999998643 3578889999999999999999985 999999999999999999999999999986
Q ss_pred hhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhH
Q 003278 268 LEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIV 324 (834)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvv 324 (834)
..... .......||+.|++||...........+++||+|.-
T Consensus 154 ~~~~~----------------~~~~~~~~t~~~~~pe~~~~~~~~~~~s~~~s~g~~ 194 (669)
T cd05610 154 TLNRE----------------LNMMDILTTPSMAKPKNDYSRTPGQVLSLISSLGFN 194 (669)
T ss_pred ccCCc----------------ccccccccCccccCccccccCCCCceeeeeeecCcC
Confidence 42211 012345689999999976544445567889999953
No 82
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.7e-38 Score=342.00 Aligned_cols=267 Identities=23% Similarity=0.285 Sum_probs=199.1
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc--ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK--GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYD 188 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 188 (834)
++|+..+.||+|+||.||+|+++.+++.||||++... .....+.+.+|+.++++++||||++++++|...+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 4688899999999999999999889999999998643 23345678899999999999999999999999999999999
Q ss_pred ccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhh
Q 003278 189 YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWL 268 (834)
Q Consensus 189 y~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 268 (834)
|++++++..+... ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.+
T Consensus 81 ~~~~~~l~~~~~~-------~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~ 150 (287)
T cd07848 81 YVEKNMLELLEEM-------PNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNL 150 (287)
T ss_pred cCCCCHHHHHHhc-------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCcccc
Confidence 9999887655422 23588999999999999999999985 9999999999999999999999999999764
Q ss_pred hhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHH
Q 003278 269 EHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLD 348 (834)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~ 348 (834)
..... .......||+.|+|||++... .++.++|||||||++|||++|+.||......+......
T Consensus 151 ~~~~~---------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~ 214 (287)
T cd07848 151 SEGSN---------------ANYTEYVATRWYRSPELLLGA-PYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQ 214 (287)
T ss_pred ccccc---------------ccccccccccccCCcHHHcCC-CCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 32100 012345689999999998654 57899999999999999999999986532211111000
Q ss_pred ---------HHHHHhhcCccccccccccCCCC-----CCHHHHHHHHHHHHHhcccCCCCCCchhhHHH
Q 003278 349 ---------WIRRLSDEGKVLQAGDNRLSDGS-----YKLCDMEHLTHLALLCTLHNPHLRPSMKWVIE 403 (834)
Q Consensus 349 ---------~~~~~~~~~~~~~~~d~~l~~~~-----~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~ 403 (834)
+...............+...... +.......+.++...||+.||++||++.++++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 215 KVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred HhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00000000000000000000000 00001235789999999999999999999875
No 83
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=2e-38 Score=321.90 Aligned_cols=263 Identities=25% Similarity=0.295 Sum_probs=201.2
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC--hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeC--CEEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG--ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHE--DQLLLV 186 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~--~~~~lV 186 (834)
++|+..+.|++|.||.||+|+++.++++||+|+++... +.+.-.-++||.+|.+++|||||.+....... +.+|||
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 45888899999999999999999999999999987542 33445568999999999999999998877643 579999
Q ss_pred EEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchh
Q 003278 187 YDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266 (834)
Q Consensus 187 ~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 266 (834)
||||.. +|..++...+ .++...+.+.++.|+++||+|||.. .|+||||||||+|+.+.|.+||+||||||
T Consensus 156 Me~~Eh-DLksl~d~m~------q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR 225 (419)
T KOG0663|consen 156 MEYVEH-DLKSLMETMK------QPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAR 225 (419)
T ss_pred HHHHHh-hHHHHHHhcc------CCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhh
Confidence 999975 8988887653 4688889999999999999999985 89999999999999999999999999999
Q ss_pred hhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchH
Q 003278 267 WLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346 (834)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l 346 (834)
.+.+.. ...|..+-|.+|.|||.+.....|+...|+||+|||+.||+++++-|.....-++.
T Consensus 226 ~ygsp~----------------k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl-- 287 (419)
T KOG0663|consen 226 EYGSPL----------------KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQL-- 287 (419)
T ss_pred hhcCCc----------------ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHH--
Confidence 764321 12466778999999999998889999999999999999999999888654433332
Q ss_pred HHHHHHHhhcCcccccccccc-----------CC-------CCCCHH-HHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 347 LDWIRRLSDEGKVLQAGDNRL-----------SD-------GSYKLC-DMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 347 ~~~~~~~~~~~~~~~~~d~~l-----------~~-------~~~~~~-~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
+-+-.++.- -.+.+-|.. .. ..+... -.+.-.+|.-.-+..||.+|-|+.+-++.
T Consensus 288 -~~If~llGt--Pte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 288 -DKIFKLLGT--PSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred -HHHHHHhCC--CccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 222222211 011111100 00 111111 01233456666678899999999987653
No 84
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=2.1e-37 Score=344.05 Aligned_cols=246 Identities=20% Similarity=0.309 Sum_probs=187.7
Q ss_pred cCcCCcccccCCcEEEEEEEC-CCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEeccC
Q 003278 515 FSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSA 593 (834)
Q Consensus 515 f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~ 593 (834)
|...+.||+|+||.||+|... +++.||||.+...........|.+|++++++++|||||++++++.+.+..++||||+.
T Consensus 76 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 155 (353)
T PLN00034 76 LERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMD 155 (353)
T ss_pred HhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCC
Confidence 344578999999999999864 6889999998765555566789999999999999999999999999999999999999
Q ss_pred CCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCC
Q 003278 594 TRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRND 673 (834)
Q Consensus 594 ~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~ 673 (834)
+|+|.... .+.+.....++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++.+....
T Consensus 156 ~~~L~~~~----------~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~ 222 (353)
T PLN00034 156 GGSLEGTH----------IADEQFLADVARQILSGIAYLHR---RHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM 222 (353)
T ss_pred CCcccccc----------cCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEcccccceeccccc
Confidence 99986432 24556677899999999999996 699999999999999999999999999998653221
Q ss_pred CCCcccccCccccccccCccchhccccC-----CCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCc
Q 003278 674 HGHRKATSGNRSVRGIFGYMSPEYIESG-----EATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRP 748 (834)
Q Consensus 674 ~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~-----~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~ 748 (834)
.......||..|+|||++... ..+.++|||||||++|||++|+.||....... .............
T Consensus 223 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~- 293 (353)
T PLN00034 223 -------DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD-WASLMCAICMSQP- 293 (353)
T ss_pred -------ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc-HHHHHHHHhccCC-
Confidence 112235799999999988532 23458999999999999999999986322211 1111111100000
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 749 LAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 749 ~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
+...... .. .+.+++.+||+.||++|||+.||++
T Consensus 294 ------~~~~~~~-~~---~l~~li~~~l~~~P~~Rpt~~ell~ 327 (353)
T PLN00034 294 ------PEAPATA-SR---EFRHFISCCLQREPAKRWSAMQLLQ 327 (353)
T ss_pred ------CCCCCcc-CH---HHHHHHHHHccCChhhCcCHHHHhc
Confidence 0011111 22 3455666899999999999999986
No 85
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.7e-38 Score=342.50 Aligned_cols=264 Identities=21% Similarity=0.261 Sum_probs=198.0
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC-hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEc
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDY 189 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 189 (834)
++|...+.||+|+||.||+|....++..||+|.+.... ......+.+|+.++++++||||+++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 46888899999999999999998899999999986432 23345678999999999999999999999999999999999
Q ss_pred cCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhh
Q 003278 190 MPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLE 269 (834)
Q Consensus 190 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~ 269 (834)
+++ +|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 85 ~~~-~l~~~l~~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~ 154 (288)
T cd07871 85 LDS-DLKQYLDNCG------NLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKS 154 (288)
T ss_pred CCc-CHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeecc
Confidence 984 8988875432 3578899999999999999999985 99999999999999999999999999987432
Q ss_pred hhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHH
Q 003278 270 HELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDW 349 (834)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~ 349 (834)
... .......||+.|+|||.+.....++.++|||||||++|||+||+.||......+.. ..
T Consensus 155 ~~~----------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~---~~ 215 (288)
T cd07871 155 VPT----------------KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEEL---HL 215 (288)
T ss_pred CCC----------------ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH---HH
Confidence 110 00123458999999998876556789999999999999999999998654322111 11
Q ss_pred HHHHhhc------------CccccccccccCCCCC---CHHHHHHHHHHHHHhcccCCCCCCchhhHHH
Q 003278 350 IRRLSDE------------GKVLQAGDNRLSDGSY---KLCDMEHLTHLALLCTLHNPHLRPSMKWVIE 403 (834)
Q Consensus 350 ~~~~~~~------------~~~~~~~d~~l~~~~~---~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~ 403 (834)
+...... ........+....... .........++...|++.||.+|||+.|+++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 216 IFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred HHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 1111000 0000000000000000 0000134678999999999999999999875
No 86
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.7e-38 Score=352.81 Aligned_cols=250 Identities=22% Similarity=0.421 Sum_probs=193.6
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc-ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEc
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDY 189 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 189 (834)
++|+..+.||+|+||.||+|.+..+|+.||||++... .....+.+.+|+.+++.++|+||+++++++...+.+++||||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence 3466778999999999999999889999999998643 334557789999999999999999999999999999999999
Q ss_pred cCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhh
Q 003278 190 MPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLE 269 (834)
Q Consensus 190 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~ 269 (834)
+++|+|.... .+++..+..|+.||+.||.|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 154 ~~~~~L~~~~-----------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~ 219 (353)
T PLN00034 154 MDGGSLEGTH-----------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILA 219 (353)
T ss_pred CCCCcccccc-----------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceecc
Confidence 9999985431 345677889999999999999985 99999999999999999999999999997543
Q ss_pred hhhhhhhhcccccccccccccceeeeccccCCCcccccc----CCCCCcccceeehhhHHHHHHhCCccCCCCCCCccch
Q 003278 270 HELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQK----GSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII 345 (834)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~----~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~ 345 (834)
... .......||..|+|||.+.. +...+.++|||||||++|||++|+.||......+...
T Consensus 220 ~~~----------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~ 283 (353)
T PLN00034 220 QTM----------------DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWAS 283 (353)
T ss_pred ccc----------------ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHH
Confidence 210 01233469999999998743 2334568999999999999999999987332221111
Q ss_pred HHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 346 LLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 346 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
+. ..... ... +... .. ....+.+++..||+.||++||++.|+++.
T Consensus 284 ~~---~~~~~-~~~-----~~~~-~~----~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 284 LM---CAICM-SQP-----PEAP-AT----ASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred HH---HHHhc-cCC-----CCCC-Cc----cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11 11000 000 0000 11 12457889999999999999999999874
No 87
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-39 Score=345.45 Aligned_cols=252 Identities=20% Similarity=0.274 Sum_probs=199.2
Q ss_pred cCCcccccCCcEEEEEEECCC-cEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEeccCCC
Q 003278 517 ESQRVAEMDFGTAYQGFLDNH-QYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATR 595 (834)
Q Consensus 517 ~~~~ig~g~~g~vy~~~~~~~-~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~~g 595 (834)
-..++|-|.||.||.|.++.. ..||||.++.+..+ .++|+.|+.+|+.++|||+|+|+|+|+....+|||.|||.+|
T Consensus 271 MkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMe--veEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yG 348 (1157)
T KOG4278|consen 271 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYG 348 (1157)
T ss_pred eeeccCCCcccceeeeeeeccceeeehhhhhhcchh--HHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCc
Confidence 357899999999999998774 46999999876544 478999999999999999999999999999999999999999
Q ss_pred chhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCCC
Q 003278 596 ILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHG 675 (834)
Q Consensus 596 ~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~~ 675 (834)
+|.+||++.++. .++--..+.+|.||+.||+||.. +..|||||..+|+|+.++..+||+||||+++++.+.+.
T Consensus 349 NLLdYLRecnr~----ev~avvLlyMAtQIsSaMeYLEk---knFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYT 421 (1157)
T KOG4278|consen 349 NLLDYLRECNRS----EVPAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYT 421 (1157)
T ss_pred cHHHHHHHhchh----hcchhHHHHHHHHHHHHHHHHHH---hhhhhhhhhhhhccccccceEEeeccchhhhhcCCcee
Confidence 999999987642 35555668899999999999985 78999999999999999999999999999998765321
Q ss_pred CcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCcccccccc
Q 003278 676 HRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDL 755 (834)
Q Consensus 676 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 755 (834)
......-.+.|.|||.+....++.|+|||+|||+|||+.|-.+..+....-..+...+......++
T Consensus 422 ------AHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM~~-------- 487 (1157)
T KOG4278|consen 422 ------AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRMDG-------- 487 (1157)
T ss_pred ------cccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccccccC--------
Confidence 111223356799999999999999999999999999999966544433322211111111111111
Q ss_pred ccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccC
Q 003278 756 SLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGN 797 (834)
Q Consensus 756 ~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~ 797 (834)
.+.|+ ..+.+||..||+-+|.+||+|+||.+.++..
T Consensus 488 ---PeGCP---pkVYeLMraCW~WsPsDRPsFaeiHqafEtm 523 (1157)
T KOG4278|consen 488 ---PEGCP---PKVYELMRACWNWSPSDRPSFAEIHQAFETM 523 (1157)
T ss_pred ---CCCCC---HHHHHHHHHHhcCCcccCccHHHHHHHHHHH
Confidence 12233 3456777899999999999999999988743
No 88
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=3.4e-38 Score=344.82 Aligned_cols=257 Identities=24% Similarity=0.386 Sum_probs=199.3
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeE----EEEEEeccc-ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTV----VAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLL 185 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~----vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 185 (834)
++|+..+.||+|+||.||+|++..+|.. ||||.+... .....+.|.+|+.+++.++||||++++|+|... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 4689999999999999999998666554 899998654 234567899999999999999999999999865 5789
Q ss_pred EEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccch
Q 003278 186 VYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLA 265 (834)
Q Consensus 186 V~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 265 (834)
|+||+++|+|.+++.... ..+++...+.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 86 v~e~~~~g~l~~~l~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a 156 (316)
T cd05108 86 ITQLMPFGCLLDYVREHK------DNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLA 156 (316)
T ss_pred eeecCCCCCHHHHHHhcc------ccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcccccc
Confidence 999999999999987532 3578999999999999999999985 9999999999999999999999999999
Q ss_pred hhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCccc
Q 003278 266 RWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQI 344 (834)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~ 344 (834)
+.+...... .......+|..|+|||++... .++.++|||||||++|||+| |+.|++.....
T Consensus 157 ~~~~~~~~~--------------~~~~~~~~~~~y~apE~~~~~-~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~--- 218 (316)
T cd05108 157 KLLGADEKE--------------YHAEGGKVPIKWMALESILHR-IYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--- 218 (316)
T ss_pred ccccCCCcc--------------eeccCCccceeecChHHhccC-CCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH---
Confidence 865322100 001112346789999998654 67899999999999999998 99988642111
Q ss_pred hHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcCC
Q 003278 345 ILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGSY 409 (834)
Q Consensus 345 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~~ 409 (834)
.+. .....+.... .+ ... ...+..++..||+.+|..||+|.+++..+....
T Consensus 219 ~~~----~~~~~~~~~~--~~----~~~----~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~ 269 (316)
T cd05108 219 EIS----SILEKGERLP--QP----PIC----TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 269 (316)
T ss_pred HHH----HHHhCCCCCC--CC----CCC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 111 1111111110 01 111 135788999999999999999999999887653
No 89
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=4.8e-38 Score=337.66 Aligned_cols=262 Identities=26% Similarity=0.432 Sum_probs=204.1
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCC-----eEEEEEEecccC-hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDG-----TVVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLL 184 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g-----~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~ 184 (834)
++|+..+.||+|+||.||+|.....+ ..||+|.+.... ......|.+|+.++.+++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 45888899999999999999875544 689999986543 344567899999999999999999999999999999
Q ss_pred EEEEccCCCCHhHHHhcCCCccc---------cCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCC
Q 003278 185 LVYDYMPNRSLDRVLFRRPENLE---------AAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQY 255 (834)
Q Consensus 185 lV~Ey~~~gsL~~~l~~~~~~~~---------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~ 255 (834)
++|||+++|+|.+++........ ....+++.....++.|++.||.|||+. +|+||||||+|||+++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcCCC
Confidence 99999999999999975422110 114689999999999999999999985 999999999999999999
Q ss_pred ceEEeeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCcc
Q 003278 256 NARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRA 334 (834)
Q Consensus 256 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p 334 (834)
.+||+|||+++........ ...+...+|+.|+|||++..+ .++.++|||||||++|||+| |+.|
T Consensus 162 ~~~L~dfg~~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~il~el~~~g~~p 226 (283)
T cd05048 162 TVKISDFGLSRDIYSADYY--------------RVQSKSLLPVRWMPPEAILYG-KFTTESDIWSFGVVLWEIFSYGLQP 226 (283)
T ss_pred cEEECCCcceeeccccccc--------------cccCCCcccccccCHHHhccC-cCchhhhHHHHHHHHHHHHcCCCCC
Confidence 9999999999754221100 012233478899999988655 57999999999999999998 9999
Q ss_pred CCCCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhc
Q 003278 335 VDLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSG 407 (834)
Q Consensus 335 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~ 407 (834)
|...... .+..++ ..+...... . .....+.+|+..||+.||.+||++.+|++.|+.
T Consensus 227 ~~~~~~~---~~~~~i----~~~~~~~~~------~----~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 227 YYGFSNQ---EVIEMI----RSRQLLPCP------E----DCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred CCCCCHH---HHHHHH----HcCCcCCCc------c----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 8643221 111111 112111110 1 112568899999999999999999999999864
No 90
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=3.5e-38 Score=333.64 Aligned_cols=251 Identities=20% Similarity=0.342 Sum_probs=197.8
Q ss_pred CcCcCCcccccCCcEEEEEEECCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEeccC
Q 003278 514 NFSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSA 593 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~ 593 (834)
+|...+.||+|+||.||++...++..+|+|.+..... ..+.|.+|+.+|++++||||++++++|.+.+..++||||++
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 5 ELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAM--SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HcEEeeEecCCcCceEEEEEeccCceEEEEecccCCc--cHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 4566678999999999999998888899998764322 23578899999999999999999999999999999999999
Q ss_pred CCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCC
Q 003278 594 TRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRND 673 (834)
Q Consensus 594 ~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~ 673 (834)
+|+|.+++.... ..++|..+..++.|++.||+|||+ .+|+||||||+||++++++.+|++|||+++......
T Consensus 83 ~~~L~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05114 83 NGCLLNYLRQRQ-----GKLSKDMLLSMCQDVCEGMEYLER---NSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDE 154 (256)
T ss_pred CCcHHHHHHhCc-----cCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcceEEEcCCCeEEECCCCCccccCCCc
Confidence 999999886432 237899999999999999999996 689999999999999999999999999997643221
Q ss_pred CCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcCccccc
Q 003278 674 HGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRPLAEL 752 (834)
Q Consensus 674 ~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (834)
. .......++..|+|||++.+..++.++|||||||++|||+| |+.|+........ ...+.. ...+
T Consensus 155 ~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~-~~~i~~---~~~~---- 220 (256)
T cd05114 155 Y------TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEV-VEMISR---GFRL---- 220 (256)
T ss_pred e------eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHHHC---CCCC----
Confidence 1 01112345678999999988889999999999999999999 8888864432221 121111 1111
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHc
Q 003278 753 VDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795 (834)
Q Consensus 753 ~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~ 795 (834)
..+. ... ..+.+++.+||+.+|++||||.+|++.|.
T Consensus 221 ~~~~----~~~---~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 221 YRPK----LAS---MTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred CCCC----CCC---HHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 1111 111 24667778999999999999999999873
No 91
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=3.3e-38 Score=348.12 Aligned_cols=245 Identities=22% Similarity=0.322 Sum_probs=195.4
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCC-eEEEEEEeccc---ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDG-TVVAVKCLAEK---GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLV 186 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g-~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 186 (834)
++|+..+.||+|+||.||+|.+..++ ..||+|++... .....+.+.+|+.++..++|||||++++++.+.+..++|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 56888999999999999999875554 68999998643 223456788999999999999999999999999999999
Q ss_pred EEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchh
Q 003278 187 YDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266 (834)
Q Consensus 187 ~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 266 (834)
|||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 110 ~Ey~~~g~L~~~i~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~ 179 (340)
T PTZ00426 110 LEFVIGGEFFTFLRRN-------KRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAK 179 (340)
T ss_pred EeCCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCe
Confidence 9999999999998643 3588999999999999999999985 99999999999999999999999999997
Q ss_pred hhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchH
Q 003278 267 WLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346 (834)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l 346 (834)
.+... .....||+.|||||++... .++.++|||||||++|||+||+.||....+ ...
T Consensus 180 ~~~~~-------------------~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~Pf~~~~~---~~~ 236 (340)
T PTZ00426 180 VVDTR-------------------TYTLCGTPEYIAPEILLNV-GHGKAADWWTLGIFIYEILVGCPPFYANEP---LLI 236 (340)
T ss_pred ecCCC-------------------cceecCChhhcCHHHHhCC-CCCccccccchhhHHHHHhcCCCCCCCCCH---HHH
Confidence 53211 2345699999999998654 578999999999999999999999864321 111
Q ss_pred HHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCC-----chhhHHH
Q 003278 347 LDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRP-----SMKWVIE 403 (834)
Q Consensus 347 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RP-----sm~~V~~ 403 (834)
..... .+.. .+. ...+ ..+.+++..|++.+|.+|+ ++.++.+
T Consensus 237 ---~~~i~-~~~~------~~p-~~~~----~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 237 ---YQKIL-EGII------YFP-KFLD----NNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred ---HHHHh-cCCC------CCC-CCCC----HHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 11111 1111 011 1111 3467899999999999995 6777664
No 92
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.8e-38 Score=336.03 Aligned_cols=202 Identities=23% Similarity=0.377 Sum_probs=167.9
Q ss_pred hCcCcCCcccccCCcEEEEEE-ECCCcEEEEEEecCCCC-hhHHHHHHHHHHHHHhccCCCceeEEEEEeeC--CeEEEE
Q 003278 513 NNFSESQRVAEMDFGTAYQGF-LDNHQYVLVKRLGMSKC-PALRTRFSNELQNLARLRHRNLVQLCGWCTEQ--GEMLVI 588 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~~-~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~--~~~~lv 588 (834)
+.|....+||+|.||.||||+ +.+|..||+|++..+.. +....-..+||.+|++|+|||||+|.+..++. +.+|+|
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV 196 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV 196 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence 456667889999999999998 67899999999987653 33334457899999999999999999988876 689999
Q ss_pred EeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccc
Q 003278 589 YDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEF 668 (834)
Q Consensus 589 ~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~ 668 (834)
+|||+. +|..++...+ ..++..+.-.++.|++.||+|||+ .+|+|||||++|||||.+|.+||+|||||++
T Consensus 197 FeYMdh-DL~GLl~~p~-----vkft~~qIKc~mkQLl~Gl~~cH~---~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~ 267 (560)
T KOG0600|consen 197 FEYMDH-DLSGLLSSPG-----VKFTEPQIKCYMKQLLEGLEYCHS---RGVLHRDIKGSNILIDNNGVLKIADFGLARF 267 (560)
T ss_pred Eecccc-hhhhhhcCCC-----cccChHHHHHHHHHHHHHHHHHhh---cCeeeccccccceEEcCCCCEEeccccceee
Confidence 999987 5656654432 247788888999999999999996 7999999999999999999999999999998
Q ss_pred cccCCCCCcccccCccccccccCccchhccccC-CCCccCcchhhHHHHHHHHhCCCccCCC
Q 003278 669 LTRNDHGHRKATSGNRSVRGIFGYMSPEYIESG-EATSMADVYSFGVVVLEVVTGQMAVDFR 729 (834)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~-~~~~k~DV~SfGvvl~E~~tG~~p~~~~ 729 (834)
....... ..++.+-|.-|.|||.+.+. .|+.++|+||.||||.||++|+..+...
T Consensus 268 y~~~~~~------~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~ 323 (560)
T KOG0600|consen 268 YTPSGSA------PYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGR 323 (560)
T ss_pred ccCCCCc------ccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCc
Confidence 6544321 12344568999999998764 6999999999999999999998776543
No 93
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=2.6e-38 Score=347.52 Aligned_cols=243 Identities=23% Similarity=0.301 Sum_probs=192.9
Q ss_pred CeeeccCCeEEEEEEECCCCeEEEEEEeccc---ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEccCCC
Q 003278 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK---GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNR 193 (834)
Q Consensus 117 ~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 193 (834)
++||+|+||.||++....+|+.||||++... .......+.+|+.+++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 4799999999999999889999999998653 2234467889999999999999999999999999999999999999
Q ss_pred CHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhhh
Q 003278 194 SLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQ 273 (834)
Q Consensus 194 sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~ 273 (834)
+|..++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~L~~~l~~~-------~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~- 149 (328)
T cd05593 81 ELFFHLSRE-------RVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA- 149 (328)
T ss_pred CHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCcc-
Confidence 999888543 3588999999999999999999985 99999999999999999999999999987421110
Q ss_pred hhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHHHHH
Q 003278 274 YQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIRRL 353 (834)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~~~~ 353 (834)
.......||+.|+|||.+... .++.++|||||||++|||+||+.||...... ......
T Consensus 150 ---------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~elltG~~Pf~~~~~~------~~~~~~ 207 (328)
T cd05593 150 ---------------ATMKTFCGTPEYLAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE------KLFELI 207 (328)
T ss_pred ---------------cccccccCCcCccChhhhcCC-CCCccCCccccchHHHHHhhCCCCCCCCCHH------HHHHHh
Confidence 012345699999999998654 5789999999999999999999998642211 111111
Q ss_pred hhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCC-----chhhHHHH
Q 003278 354 SDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRP-----SMKWVIEA 404 (834)
Q Consensus 354 ~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RP-----sm~~V~~~ 404 (834)
.. +. ..+. ... ...+.++...||+.||.+|| ++.++++.
T Consensus 208 ~~-~~------~~~p-~~~----~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 208 LM-ED------IKFP-RTL----SADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred cc-CC------ccCC-CCC----CHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 11 10 1111 111 13567889999999999997 77777653
No 94
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=7.8e-38 Score=343.93 Aligned_cols=244 Identities=24% Similarity=0.333 Sum_probs=190.3
Q ss_pred CeeeccCCeEEEEEEECCCCeEEEEEEeccc---ChhhHHHHHHHHHHHHhC-CCCceeeEeeeEEeCCEEEEEEEccCC
Q 003278 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK---GERFEKTFAAELVAVAHL-RHRNLVRLRGWCVHEDQLLLVYDYMPN 192 (834)
Q Consensus 117 ~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 192 (834)
+.||+|+||.||+|....+++.||+|++... .....+.+..|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 4799999999999999999999999998753 223345677888888776 899999999999999999999999999
Q ss_pred CCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhh
Q 003278 193 RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHEL 272 (834)
Q Consensus 193 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~ 272 (834)
|+|..++... ..+++..+..|+.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~-------~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~ 150 (329)
T cd05618 81 GDLMFHMQRQ-------RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 150 (329)
T ss_pred CCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCC
Confidence 9998887542 3588999999999999999999985 99999999999999999999999999987421100
Q ss_pred hhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCc--cchHHHHH
Q 003278 273 QYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDD--QIILLDWI 350 (834)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~--~~~l~~~~ 350 (834)
.......||+.|+|||++... .++.++|||||||++|||+||+.||....... ......++
T Consensus 151 ----------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~ 213 (329)
T cd05618 151 ----------------DTTSTFCGTPNYIAPEILRGE-DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL 213 (329)
T ss_pred ----------------CccccccCCccccCHHHHcCC-CCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHH
Confidence 012345799999999998654 67889999999999999999999996322111 11122333
Q ss_pred HHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCch
Q 003278 351 RRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSM 398 (834)
Q Consensus 351 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm 398 (834)
......... .+. ... ...+..++..||+.||.+||+.
T Consensus 214 ~~~i~~~~~------~~p-~~~----~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 214 FQVILEKQI------RIP-RSL----SVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred HHHHhcCCC------CCC-CCC----CHHHHHHHHHHhcCCHHHcCCC
Confidence 332222111 111 111 2357789999999999999984
No 95
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.1e-37 Score=342.83 Aligned_cols=244 Identities=23% Similarity=0.320 Sum_probs=191.7
Q ss_pred CeeeccCCeEEEEEEECCCCeEEEEEEeccc---ChhhHHHHHHHHHHHHhC-CCCceeeEeeeEEeCCEEEEEEEccCC
Q 003278 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK---GERFEKTFAAELVAVAHL-RHRNLVRLRGWCVHEDQLLLVYDYMPN 192 (834)
Q Consensus 117 ~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 192 (834)
++||+|+||.||+|....++..||||+++.. .....+.+..|..++.++ +||||++++++|...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 4799999999999999889999999998753 223345678899999988 799999999999999999999999999
Q ss_pred CCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhh
Q 003278 193 RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHEL 272 (834)
Q Consensus 193 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~ 272 (834)
|+|..++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 81 g~L~~~~~~~-------~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~- 149 (329)
T cd05588 81 GDLMFHMQRQ-------RKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP- 149 (329)
T ss_pred CCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccC-
Confidence 9998887542 3589999999999999999999985 9999999999999999999999999998632110
Q ss_pred hhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCc--cchHHHHH
Q 003278 273 QYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDD--QIILLDWI 350 (834)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~--~~~l~~~~ 350 (834)
........||+.|+|||++... .++.++|||||||++|||+||+.||+.....+ .....++.
T Consensus 150 ---------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~ 213 (329)
T cd05588 150 ---------------GDTTSTFCGTPNYIAPEILRGE-DYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYL 213 (329)
T ss_pred ---------------CCccccccCCccccCHHHHcCC-CCCCccceechHHHHHHHHHCCCCcccccccccccccchHHH
Confidence 0012346799999999998654 67899999999999999999999997432211 11222333
Q ss_pred HHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCch
Q 003278 351 RRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSM 398 (834)
Q Consensus 351 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm 398 (834)
......+.. ++. ... ...+.+++..||+.||.+||+.
T Consensus 214 ~~~~~~~~~------~~p-~~~----~~~~~~li~~~L~~dP~~R~~~ 250 (329)
T cd05588 214 FQVILEKQI------RIP-RSL----SVKASSVLKGFLNKDPKERLGC 250 (329)
T ss_pred HHHHHcCCC------CCC-CCC----CHHHHHHHHHHhccCHHHcCCC
Confidence 332222211 111 111 1357789999999999999984
No 96
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-38 Score=345.64 Aligned_cols=248 Identities=27% Similarity=0.400 Sum_probs=202.2
Q ss_pred CeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEccCCCCHh
Q 003278 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLD 196 (834)
Q Consensus 117 ~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~ 196 (834)
-+||+|.||+||-|++..+...+|||-+..+..+..+-+..|+.+.++|+|+|||+++|+|.+++.+-+.||-+|||||.
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 37999999999999999888999999998888888888999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCccccCCCC--CHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEEC-CCCceEEeeccchhhhhhhhh
Q 003278 197 RVLFRRPENLEAAAPL--NWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLD-SQYNARLGDFGLARWLEHELQ 273 (834)
Q Consensus 197 ~~l~~~~~~~~~~~~l--~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld-~~~~~kl~DFGla~~~~~~~~ 273 (834)
++|... .+|| ++.+.-.+..||++||.|||+. .|||||||-.|||++ -.|.+||+|||.++.+..-.
T Consensus 661 sLLrsk------WGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgin- 730 (1226)
T KOG4279|consen 661 SLLRSK------WGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGIN- 730 (1226)
T ss_pred HHHHhc------cCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccCC-
Confidence 999654 4566 7788889999999999999996 999999999999997 47889999999998653211
Q ss_pred hhhhcccccccccccccceeeeccccCCCccccccCC-CCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHHHH
Q 003278 274 YQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGS-VATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIRR 352 (834)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~-~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~~~ 352 (834)
.-+-++.||..|||||++..|. .|...+|||||||++.||.|||+||-..... +. .
T Consensus 731 ---------------P~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgsp-qA-------A 787 (1226)
T KOG4279|consen 731 ---------------PCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSP-QA-------A 787 (1226)
T ss_pred ---------------ccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCCh-hH-------h
Confidence 1145678999999999997654 4788999999999999999999998532211 11 1
Q ss_pred HhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 353 LSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 353 ~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
+..-| +-.+.|.+ +.+--......++.|..++|.+||+++++++.
T Consensus 788 MFkVG--myKvHP~i-----Peelsaeak~FilrcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 788 MFKVG--MYKVHPPI-----PEELSAEAKNFILRCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred hhhhc--ceecCCCC-----cHHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence 11111 11122222 22223456678999999999999999998863
No 97
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=6e-38 Score=342.29 Aligned_cols=243 Identities=19% Similarity=0.217 Sum_probs=189.7
Q ss_pred ccccCCcEEEEEEEC-CCcEEEEEEecCCC--ChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEeccCCCch
Q 003278 521 VAEMDFGTAYQGFLD-NHQYVLVKRLGMSK--CPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRIL 597 (834)
Q Consensus 521 ig~g~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~~g~L 597 (834)
||+|+||.||+|... ++..||+|.+.... .......+.+|+.+|.+++|||||++++++.+.+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999964 57889999986432 223346788999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCCCCc
Q 003278 598 SHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHR 677 (834)
Q Consensus 598 ~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~~~~ 677 (834)
.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~---~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~---- 147 (312)
T cd05585 81 FHHLQREG------RFDLSRARFYTAELLCALENLHK---FNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD---- 147 (312)
T ss_pred HHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHeEECCCCcEEEEECcccccCccCC----
Confidence 99886532 37888889999999999999996 699999999999999999999999999997532211
Q ss_pred ccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCcccccccccc
Q 003278 678 KATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSL 757 (834)
Q Consensus 678 ~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 757 (834)
......+||+.|||||++.+..++.++|||||||++|||+||+.||........ .. .... .+. .+
T Consensus 148 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~-~~---~~~~--~~~------~~ 212 (312)
T cd05585 148 ---DKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEM-YR---KILQ--EPL------RF 212 (312)
T ss_pred ---CccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHH-HH---HHHc--CCC------CC
Confidence 112346799999999999999999999999999999999999999864322211 11 1111 110 11
Q ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHc
Q 003278 758 NGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795 (834)
Q Consensus 758 ~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~ 795 (834)
....+ .+ +.+++.+||..||++||++..+.+.|+
T Consensus 213 ~~~~~-~~---~~~li~~~L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 213 PDGFD-RD---AKDLLIGLLSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred CCcCC-HH---HHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence 11122 23 445556899999999997665555543
No 98
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=2.3e-38 Score=347.27 Aligned_cols=242 Identities=25% Similarity=0.304 Sum_probs=191.8
Q ss_pred CeeeccCCeEEEEEEECCCCeEEEEEEeccc---ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEccCCC
Q 003278 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK---GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNR 193 (834)
Q Consensus 117 ~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 193 (834)
+.||+|+||.||++....+|..||+|++... .......+.+|+.++++++||||++++++|...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 4799999999999999889999999998653 2233456788999999999999999999999999999999999999
Q ss_pred CHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhhh
Q 003278 194 SLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQ 273 (834)
Q Consensus 194 sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~ 273 (834)
+|..++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~L~~~l~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~- 149 (323)
T cd05595 81 ELFFHLSRE-------RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG- 149 (323)
T ss_pred cHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCC-
Confidence 998888543 3588999999999999999999985 99999999999999999999999999987421110
Q ss_pred hhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHHHHH
Q 003278 274 YQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIRRL 353 (834)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~~~~ 353 (834)
.......||+.|+|||.+..+ .++.++|||||||++|||+||+.||...... .+. ...
T Consensus 150 ---------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~---~~~---~~~ 207 (323)
T cd05595 150 ---------------ATMKTFCGTPEYLAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---RLF---ELI 207 (323)
T ss_pred ---------------CccccccCCcCcCCcccccCC-CCCchhchhhhHHHHHHHHhCCCCCCCCCHH---HHH---HHH
Confidence 012335699999999998654 6789999999999999999999998643211 111 111
Q ss_pred hhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCC-----chhhHHH
Q 003278 354 SDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRP-----SMKWVIE 403 (834)
Q Consensus 354 ~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RP-----sm~~V~~ 403 (834)
.. +. ..+. ... ...+.++...||+.||.+|| ++.++++
T Consensus 208 ~~-~~------~~~p-~~~----~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 208 LM-EE------IRFP-RTL----SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred hc-CC------CCCC-CCC----CHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 11 11 0111 111 13577899999999999998 6777765
No 99
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.2e-38 Score=365.17 Aligned_cols=254 Identities=22% Similarity=0.325 Sum_probs=201.8
Q ss_pred CCCCCeeeccCCeEEEEEEECCC-CeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEccC
Q 003278 113 FDEDEVLGSGGFGKVYRAVLPSD-GTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMP 191 (834)
Q Consensus 113 f~~~~~LG~G~fG~Vy~~~~~~~-g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 191 (834)
|...+.||+|+||.||+|....+ +..||+|.+..........+.+|+.+|+.++|||||+++++|...+..||||||++
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~ 148 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGS 148 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCC
Confidence 77889999999999999998777 78899998765555555678889999999999999999999999999999999999
Q ss_pred CCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhh
Q 003278 192 NRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHE 271 (834)
Q Consensus 192 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 271 (834)
+|+|.++|.... ....++++.....++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.+...
T Consensus 149 gg~L~~~l~~~~---~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~ 222 (478)
T PTZ00267 149 GGDLNKQIKQRL---KEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDS 222 (478)
T ss_pred CCCHHHHHHHHH---hccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecCCc
Confidence 999999886432 1235689999999999999999999985 9999999999999999999999999999864321
Q ss_pred hhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHHH
Q 003278 272 LQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIR 351 (834)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~~ 351 (834)
.. .......+||++|+|||++... .++.++|||||||++|||+||+.||..... .....
T Consensus 223 ~~--------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~------~~~~~ 281 (478)
T PTZ00267 223 VS--------------LDVASSFCGTPYYLAPELWERK-RYSKKADMWSLGVILYELLTLHRPFKGPSQ------REIMQ 281 (478)
T ss_pred cc--------------cccccccCCCccccCHhHhCCC-CCCcHHhHHHHHHHHHHHHhCCCCCCCCCH------HHHHH
Confidence 10 0113456799999999988654 679999999999999999999999864321 11111
Q ss_pred HHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 352 RLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 352 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
.... +.... .. ... ...+.+++..||+.+|+.||++.+++..
T Consensus 282 ~~~~-~~~~~-----~~-~~~----s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 282 QVLY-GKYDP-----FP-CPV----SSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred HHHh-CCCCC-----CC-ccC----CHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 1111 11110 00 111 1357889999999999999999998753
No 100
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=5.3e-38 Score=352.86 Aligned_cols=265 Identities=25% Similarity=0.383 Sum_probs=203.1
Q ss_pred cCCCCCCCeeeccCCeEEEEEEECC-----CCeEEEEEEecccC-hhhHHHHHHHHHHHHhCC-CCceeeEeeeEEeCCE
Q 003278 110 SNGFDEDEVLGSGGFGKVYRAVLPS-----DGTVVAVKCLAEKG-ERFEKTFAAELVAVAHLR-HRNLVRLRGWCVHEDQ 182 (834)
Q Consensus 110 t~~f~~~~~LG~G~fG~Vy~~~~~~-----~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~-H~nIv~l~g~~~~~~~ 182 (834)
.++|...++||+|+||.||+|.+.. .+..||||++.... ....+.|.+|+.+++++. |||||+++|+|.+.+.
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~ 115 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP 115 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence 4678889999999999999998643 23579999986542 334567999999999996 9999999999999999
Q ss_pred EEEEEEccCCCCHhHHHhcCCCcc--------------------------------------------------------
Q 003278 183 LLLVYDYMPNRSLDRVLFRRPENL-------------------------------------------------------- 206 (834)
Q Consensus 183 ~~lV~Ey~~~gsL~~~l~~~~~~~-------------------------------------------------------- 206 (834)
.|||||||++|+|.++|+......
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
T cd05105 116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK 195 (400)
T ss_pred eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence 999999999999999986532100
Q ss_pred ---------------------------------ccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECC
Q 003278 207 ---------------------------------EAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDS 253 (834)
Q Consensus 207 ---------------------------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~ 253 (834)
.....++|..+..++.|+++||.|||+. +|+||||||+|||++.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill~~ 272 (400)
T cd05105 196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLLAQ 272 (400)
T ss_pred hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEEeC
Confidence 0123588999999999999999999985 9999999999999999
Q ss_pred CCceEEeeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CC
Q 003278 254 QYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GR 332 (834)
Q Consensus 254 ~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~ 332 (834)
++.+||+|||+++.+...... .......|++.|+|||.+... .++.++|||||||++|||++ |.
T Consensus 273 ~~~~kL~DfGla~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwSlGvil~ellt~g~ 337 (400)
T cd05105 273 GKIVKICDFGLARDIMHDSNY--------------VSKGSTFLPVKWMAPESIFDN-LYTTLSDVWSYGILLWEIFSLGG 337 (400)
T ss_pred CCEEEEEeCCcceeccccccc--------------cccCCcCCCcceEChhhhcCC-CCCchhhHHHHHHHHHHHHHCCC
Confidence 999999999999754321100 012233478899999988654 67999999999999999997 88
Q ss_pred ccCCCCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcC
Q 003278 333 RAVDLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGS 408 (834)
Q Consensus 333 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~ 408 (834)
.|+.....+.. +. .....+.... .. .. ....+.+++..||+.+|++||++.+|++.|...
T Consensus 338 ~P~~~~~~~~~--~~----~~~~~~~~~~-----~~-~~----~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l 397 (400)
T cd05105 338 TPYPGMIVDST--FY----NKIKSGYRMA-----KP-DH----ATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESL 397 (400)
T ss_pred CCCcccchhHH--HH----HHHhcCCCCC-----CC-cc----CCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHH
Confidence 88864322211 11 1111111110 00 11 124578899999999999999999999998764
No 101
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-38 Score=350.70 Aligned_cols=246 Identities=23% Similarity=0.303 Sum_probs=197.6
Q ss_pred HhhcCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC---hhhHHHHHHHHHHHHhC-CCCceeeEeeeEEeCCE
Q 003278 107 YIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAELVAVAHL-RHRNLVRLRGWCVHEDQ 182 (834)
Q Consensus 107 ~~~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~~ 182 (834)
....++|...++||+|+||+|+++..+.+++.+|||++++.. ....+....|.+++... +||.|+.|+.+|...++
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~ 443 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH 443 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence 345678999999999999999999999999999999998652 33455677788877766 59999999999999999
Q ss_pred EEEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeec
Q 003278 183 LLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDF 262 (834)
Q Consensus 183 ~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 262 (834)
+|+||||+.||++..+.+ ...++......++.+|+.||.|||+. +||+||||-+|||||.+|++||+||
T Consensus 444 l~fvmey~~Ggdm~~~~~--------~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADF 512 (694)
T KOG0694|consen 444 LFFVMEYVAGGDLMHHIH--------TDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADF 512 (694)
T ss_pred EEEEEEecCCCcEEEEEe--------cccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEeccc
Confidence 999999999999654443 24688899999999999999999995 9999999999999999999999999
Q ss_pred cchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCc
Q 003278 263 GLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDD 342 (834)
Q Consensus 263 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~ 342 (834)
|+++..- .....+++++|||.|||||++... .|+..+|+|||||+||||+.|..||.....+
T Consensus 513 GlcKe~m----------------~~g~~TsTfCGTpey~aPEil~e~-~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe- 574 (694)
T KOG0694|consen 513 GLCKEGM----------------GQGDRTSTFCGTPEFLAPEVLTEQ-SYTRAVDWWGLGVLLYEMLVGESPFPGDDEE- 574 (694)
T ss_pred ccccccC----------------CCCCccccccCChhhcChhhhccC-cccchhhHHHHHHHHHHHHcCCCCCCCCCHH-
Confidence 9998421 111247889999999999998755 7899999999999999999999999754322
Q ss_pred cchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCch
Q 003278 343 QIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSM 398 (834)
Q Consensus 343 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm 398 (834)
.+.+-+. . .| ..|+..-..+.+.|+..-+..||++|--+
T Consensus 575 --e~FdsI~---~-------d~-----~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 575 --EVFDSIV---N-------DE-----VRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred --HHHHHHh---c-------CC-----CCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 2222111 1 11 11222222345677778889999999877
No 102
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.3e-37 Score=349.17 Aligned_cols=268 Identities=22% Similarity=0.286 Sum_probs=195.9
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC---hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEE
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYD 188 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 188 (834)
.|+..+.||+|+||+||+|+...++..||||++.... ....+.+.+|+.++.+++|||||++++++.+.+.+++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5888899999999999999999999999999986532 2345678899999999999999999999999999999999
Q ss_pred ccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhh
Q 003278 189 YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWL 268 (834)
Q Consensus 189 y~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 268 (834)
|+++|+|.+++.+. ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+
T Consensus 82 ~~~gg~L~~~l~~~-------~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~ 151 (381)
T cd05626 82 YIPGGDMMSLLIRM-------EVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGF 151 (381)
T ss_pred cCCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCccc
Confidence 99999999998643 3578889999999999999999985 9999999999999999999999999998643
Q ss_pred hhhhhhhh-hc------cc-c-----------------------cccccccccceeeeccccCCCccccccCCCCCcccc
Q 003278 269 EHELQYQM-RT------SS-A-----------------------RNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSD 317 (834)
Q Consensus 269 ~~~~~~~~-~~------~~-~-----------------------~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksD 317 (834)
........ .. .. . ...........+..||+.|+|||.+... .++.++|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~D 230 (381)
T cd05626 152 RWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRK-GYTQLCD 230 (381)
T ss_pred ccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCC-CCCCccc
Confidence 21100000 00 00 0 0000000012346799999999998654 5789999
Q ss_pred eeehhhHHHHHHhCCccCCCCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHH--HhcccCCCCC
Q 003278 318 VFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLAL--LCTLHNPHLR 395 (834)
Q Consensus 318 V~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~--~Cl~~~p~~R 395 (834)
||||||++|||+||+.||........ . ............. +. ...+. .+.++.. .|+..+|..|
T Consensus 231 iwSlG~il~elltG~~Pf~~~~~~~~---~---~~i~~~~~~~~~~-~~---~~~s~----~~~dli~~ll~~~~~~~~R 296 (381)
T cd05626 231 WWSVGVILFEMLVGQPPFLAPTPTET---Q---LKVINWENTLHIP-PQ---VKLSP----EAVDLITKLCCSAEERLGR 296 (381)
T ss_pred eeehhhHHHHHHhCCCCCcCCCHHHH---H---HHHHccccccCCC-CC---CCCCH----HHHHHHHHHccCcccccCC
Confidence 99999999999999999975432211 0 1111100001100 00 11222 2334443 3778888889
Q ss_pred CchhhHHHH
Q 003278 396 PSMKWVIEA 404 (834)
Q Consensus 396 Psm~~V~~~ 404 (834)
|++.+++..
T Consensus 297 ~~~~~~l~h 305 (381)
T cd05626 297 NGADDIKAH 305 (381)
T ss_pred CCHHHHhcC
Confidence 999999864
No 103
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=2.6e-37 Score=344.85 Aligned_cols=268 Identities=22% Similarity=0.315 Sum_probs=196.7
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC---hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVY 187 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 187 (834)
++|+..+.||+|+||.||+|+...+|+.||||++.... ......+.+|+.++..++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 47888999999999999999998899999999986431 233456788999999999999999999999999999999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhh
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARW 267 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 267 (834)
||+++|+|.+++... ..+++..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 81 E~~~~g~L~~~l~~~-------~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 150 (364)
T cd05599 81 EYLPGGDMMTLLMKK-------DTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTG 150 (364)
T ss_pred CCCCCcHHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeeccccee
Confidence 999999999998643 3588999999999999999999985 999999999999999999999999999975
Q ss_pred hhhhhhhhhhccccc-------------------cccc---ccccceeeeccccCCCccccccCCCCCcccceeehhhHH
Q 003278 268 LEHELQYQMRTSSAR-------------------NHQF---HLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVV 325 (834)
Q Consensus 268 ~~~~~~~~~~~~~~~-------------------~~~~---~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl 325 (834)
+.............. .... .........||+.|+|||++... .++.++|||||||++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il 229 (364)
T cd05599 151 LKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQT-GYNKECDWWSLGVIM 229 (364)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCC-CCCCeeeeecchhHH
Confidence 432110000000000 0000 00001235699999999988654 578999999999999
Q ss_pred HHHHhCCccCCCCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCc---hhhHH
Q 003278 326 LEVVSGRRAVDLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPS---MKWVI 402 (834)
Q Consensus 326 ~ElltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs---m~~V~ 402 (834)
|||++|+.||...... ................+. .... ..+.++...|+. +|.+||+ +.+++
T Consensus 230 ~el~~G~~Pf~~~~~~------~~~~~i~~~~~~~~~~~~----~~~s----~~~~~li~~ll~-~p~~R~~~~~~~~ll 294 (364)
T cd05599 230 YEMLVGYPPFCSDNPQ------ETYRKIINWKETLQFPDE----VPLS----PEAKDLIKRLCC-EAERRLGNNGVNEIK 294 (364)
T ss_pred HHhhcCCCCCCCCCHH------HHHHHHHcCCCccCCCCC----CCCC----HHHHHHHHHHcc-CHhhcCCCCCHHHHh
Confidence 9999999998643211 111111111111111100 0111 245567777775 8999998 77776
Q ss_pred HH
Q 003278 403 EA 404 (834)
Q Consensus 403 ~~ 404 (834)
+.
T Consensus 295 ~h 296 (364)
T cd05599 295 SH 296 (364)
T ss_pred cC
Confidence 53
No 104
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.6e-37 Score=341.79 Aligned_cols=255 Identities=21% Similarity=0.286 Sum_probs=199.9
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC---hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVY 187 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 187 (834)
++|+..+.||+|+||.||+|....+|+.||||++.... ....+.+.+|+.++..++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 46888999999999999999999999999999987532 234566889999999999999999999999999999999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhh
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARW 267 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 267 (834)
||+++|+|.+++.... ..+++.....++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 81 e~~~~~~L~~~l~~~~------~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~ 151 (330)
T cd05601 81 EYQPGGDLLSLLNRYE------DQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAAR 151 (330)
T ss_pred CCCCCCCHHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeE
Confidence 9999999999986532 3588999999999999999999985 999999999999999999999999999975
Q ss_pred hhhhhhhhhhcccccccccccccceeeeccccCCCcccccc-----CCCCCcccceeehhhHHHHHHhCCccCCCCCCCc
Q 003278 268 LEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQK-----GSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDD 342 (834)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-----~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~ 342 (834)
+..... .......||+.|+|||.+.. +..++.++|||||||++|||+||+.||......
T Consensus 152 ~~~~~~---------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~- 215 (330)
T cd05601 152 LTANKM---------------VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSA- 215 (330)
T ss_pred CCCCCc---------------eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHH-
Confidence 432110 01233469999999998863 345688999999999999999999998643211
Q ss_pred cchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 343 QIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 343 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
.....+..........+. ... ...+.+|...|++ +|.+||++.+++..
T Consensus 216 -----~~~~~i~~~~~~~~~~~~----~~~----~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 216 -----KTYNNIMNFQRFLKFPED----PKV----SSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred -----HHHHHHHcCCCccCCCCC----CCC----CHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 112222221111111110 011 1346778888997 99999999988753
No 105
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=4.1e-38 Score=342.08 Aligned_cols=266 Identities=23% Similarity=0.294 Sum_probs=197.2
Q ss_pred cCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC-hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEE
Q 003278 110 SNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYD 188 (834)
Q Consensus 110 t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 188 (834)
.++|+..+.||+|+||.||+|....+|+.||||++.... ......+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 467999999999999999999998899999999986432 2223457789999999999999999999999999999999
Q ss_pred ccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhh
Q 003278 189 YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWL 268 (834)
Q Consensus 189 y~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 268 (834)
|++ ++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 84 ~~~-~~l~~~~~~~------~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 153 (303)
T cd07869 84 YVH-TDLCQYMDKH------PGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAK 153 (303)
T ss_pred CCC-cCHHHHHHhC------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceec
Confidence 996 6777777543 23578889999999999999999985 9999999999999999999999999998743
Q ss_pred hhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHH
Q 003278 269 EHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLD 348 (834)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~ 348 (834)
.... .......||+.|+|||.+.....++.++|||||||++|||+||+.||....... ....
T Consensus 154 ~~~~----------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--~~~~ 215 (303)
T cd07869 154 SVPS----------------HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQ--DQLE 215 (303)
T ss_pred cCCC----------------ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHH--HHHH
Confidence 2110 011234589999999988655567889999999999999999999997432111 1111
Q ss_pred HHHHHhhcCc---cc-----ccccc-ccCC-CCCCHH-------HHHHHHHHHHHhcccCCCCCCchhhHHH
Q 003278 349 WIRRLSDEGK---VL-----QAGDN-RLSD-GSYKLC-------DMEHLTHLALLCTLHNPHLRPSMKWVIE 403 (834)
Q Consensus 349 ~~~~~~~~~~---~~-----~~~d~-~l~~-~~~~~~-------~~~~l~~l~~~Cl~~~p~~RPsm~~V~~ 403 (834)
.+........ .. ...++ +... ...... ....+.+++..|++.||.+|||+.++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 216 RIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred HHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 1111110000 00 00000 0000 000000 0134668999999999999999999885
No 106
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.8e-37 Score=341.63 Aligned_cols=200 Identities=19% Similarity=0.298 Sum_probs=174.3
Q ss_pred hCcCcCCcccccCCcEEEEEEEC-CCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEec
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY 591 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey 591 (834)
++|...++||+|+||.||++... ++..+|+|.+...........|.+|++++++++|||||+++++|.+.+..++||||
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEec
Confidence 57888899999999999999975 57889999887655555567899999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccccc
Q 003278 592 SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTR 671 (834)
Q Consensus 592 ~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~ 671 (834)
+++|+|.+++...+ .+++.....++.|++.||+|||+. .+|+||||||+|||+++++.+||+|||++..+..
T Consensus 85 ~~~~~L~~~l~~~~------~~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~ 156 (333)
T cd06650 85 MDGGSLDQVLKKAG------RIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 156 (333)
T ss_pred CCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCCCCEEEeeCCcchhhhh
Confidence 99999999986532 377888889999999999999962 4799999999999999999999999999875432
Q ss_pred CCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCC
Q 003278 672 NDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFR 729 (834)
Q Consensus 672 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~ 729 (834)
. ......||..|+|||++.+..++.++|||||||++|||++|+.|+...
T Consensus 157 ~---------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 205 (333)
T cd06650 157 S---------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP 205 (333)
T ss_pred h---------ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 1 122357899999999999888999999999999999999999998643
No 107
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=2.7e-38 Score=335.54 Aligned_cols=250 Identities=36% Similarity=0.591 Sum_probs=190.5
Q ss_pred CCeeeccCCeEEEEEEEC----CCCeEEEEEEeccc-ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEcc
Q 003278 116 DEVLGSGGFGKVYRAVLP----SDGTVVAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYM 190 (834)
Q Consensus 116 ~~~LG~G~fG~Vy~~~~~----~~g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 190 (834)
.+.||.|+||.||+|.+. ..+..|+||.++.. .....+.|.+|+..+++++||||++++|+|...+..++||||+
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~ 83 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC 83 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 468999999999999996 34678999999653 3345788999999999999999999999999888899999999
Q ss_pred CCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhh
Q 003278 191 PNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEH 270 (834)
Q Consensus 191 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~ 270 (834)
++|+|.++|.... ...++|..+..|+.|||+||.|||+. +|+|+||+++|||+++++.+||+|||+++....
T Consensus 84 ~~g~L~~~L~~~~-----~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~ 155 (259)
T PF07714_consen 84 PGGSLDDYLKSKN-----KEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISE 155 (259)
T ss_dssp TTEBHHHHHHHTC-----TTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTT
T ss_pred ccccccccccccc-----cccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccc
Confidence 9999999998751 34689999999999999999999995 899999999999999999999999999976421
Q ss_pred hhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCccchHHHH
Q 003278 271 ELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQIILLDW 349 (834)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~~l~~~ 349 (834)
.... .......+...|+|||.+... .++.++||||||+++|||+| |+.|+... . ...+
T Consensus 156 ~~~~--------------~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVysfG~~l~ei~~~~~~p~~~~--~----~~~~ 214 (259)
T PF07714_consen 156 KSKY--------------KNDSSQQLPLRYLAPEVLKDG-EYTKKSDVYSFGMLLYEILTLGKFPFSDY--D----NEEI 214 (259)
T ss_dssp SSSE--------------EESTTSESGGGGS-HHHHHHS-EESHHHHHHHHHHHHHHHHTTSSGTTTTS--C----HHHH
T ss_pred cccc--------------ccccccccccccccccccccc-ccccccccccccccccccccccccccccc--c----cccc
Confidence 1000 011223467899999998765 47999999999999999999 67776432 1 1222
Q ss_pred HHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHh
Q 003278 350 IRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAV 405 (834)
Q Consensus 350 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l 405 (834)
...+ .++......+ . ....+..++..||..+|++||+|.++++.|
T Consensus 215 ~~~~-~~~~~~~~~~-~---------~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 215 IEKL-KQGQRLPIPD-N---------CPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp HHHH-HTTEETTSBT-T---------SBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred cccc-cccccceecc-c---------hhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 2232 2232222111 1 124588999999999999999999999875
No 108
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=9.1e-38 Score=348.81 Aligned_cols=258 Identities=22% Similarity=0.262 Sum_probs=199.8
Q ss_pred HhhcCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc---ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEE
Q 003278 107 YIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK---GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQL 183 (834)
Q Consensus 107 ~~~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~ 183 (834)
....++|+..+.||+|+||.||+|....++..||||++... .....+.+.+|+.+++.++||||+++++++.+++..
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~ 118 (370)
T cd05596 39 RMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYL 118 (370)
T ss_pred CCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 34567899999999999999999999889999999998642 122345578899999999999999999999999999
Q ss_pred EEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeecc
Q 003278 184 LLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFG 263 (834)
Q Consensus 184 ~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 263 (834)
++||||+++|+|.+++... .++......++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 119 ~lv~Ey~~gg~L~~~l~~~--------~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG 187 (370)
T cd05596 119 YMVMEYMPGGDLVNLMSNY--------DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFG 187 (370)
T ss_pred EEEEcCCCCCcHHHHHHhc--------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEecc
Confidence 9999999999999988542 367778889999999999999985 99999999999999999999999999
Q ss_pred chhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccC---CCCCcccceeehhhHHHHHHhCCccCCCCCC
Q 003278 264 LARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKG---SVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340 (834)
Q Consensus 264 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~---~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~ 340 (834)
+++.+.... ........||+.|+|||.+... ..++.++|||||||++|||+||+.||.....
T Consensus 188 ~~~~~~~~~---------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~ 252 (370)
T cd05596 188 TCMKMDANG---------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL 252 (370)
T ss_pred ceeeccCCC---------------cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCH
Confidence 987542210 0012345699999999988542 2468899999999999999999999864321
Q ss_pred CccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCC--CCchhhHHHH
Q 003278 341 DDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHL--RPSMKWVIEA 404 (834)
Q Consensus 341 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~--RPsm~~V~~~ 404 (834)
. .....+..........+. ... ...+.++...|++.+|.+ ||++.++++.
T Consensus 253 ~------~~~~~i~~~~~~~~~~~~----~~~----s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 253 V------GTYSKIMDHKNSLTFPDD----IEI----SKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred H------HHHHHHHcCCCcCCCCCc----CCC----CHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 1 111111111110111110 011 135678899999999987 9999998764
No 109
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-39 Score=313.84 Aligned_cols=276 Identities=22% Similarity=0.289 Sum_probs=215.0
Q ss_pred HhhcCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCC-----
Q 003278 107 YIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHED----- 181 (834)
Q Consensus 107 ~~~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~----- 181 (834)
.+..++|.+.+.||+|||+-||.+..-.++..+|+|++.....+..+..++|+...++++||||+++++++..+.
T Consensus 17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~ 96 (302)
T KOG2345|consen 17 IINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKH 96 (302)
T ss_pred EEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCce
Confidence 345567999999999999999999988999999999998877777888999999999999999999999886543
Q ss_pred EEEEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEee
Q 003278 182 QLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGD 261 (834)
Q Consensus 182 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~D 261 (834)
+.||++.|...|||.+.+...+. +...+++.+.+.|+.++++||.+||+. .+++.||||||.|||+.+++.++|.|
T Consensus 97 ~~yll~Pyy~~Gsl~d~i~~~k~---kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D 172 (302)
T KOG2345|consen 97 EAYLLLPYYKRGSLLDEIERLKI---KGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMD 172 (302)
T ss_pred eEEEEeehhccccHHHHHHHHhh---cCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEe
Confidence 49999999999999999976543 245789999999999999999999985 45799999999999999999999999
Q ss_pred ccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccc--cCCCCCcccceeehhhHHHHHHhCCccCCCCC
Q 003278 262 FGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQ--KGSVATAKSDVFSFGIVVLEVVSGRRAVDLTY 339 (834)
Q Consensus 262 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~--~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~ 339 (834)
||.++...-....+. . .........-..|..|.|||.+. .+...+.++|||||||+||+|+.|..||+..+
T Consensus 173 ~GS~~~a~i~i~~~~------~-a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~ 245 (302)
T KOG2345|consen 173 LGSATQAPIQIEGSR------Q-ALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIY 245 (302)
T ss_pred ccCccccceEeechH------H-HHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHh
Confidence 999876432111000 0 00111123334689999999874 35567899999999999999999999998665
Q ss_pred CCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhc
Q 003278 340 PDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSG 407 (834)
Q Consensus 340 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~ 407 (834)
..+....+. ...+++.-.-++ .+ .+.+.++..+|++.||.+||+..+++..+..
T Consensus 246 ~~GgSlaLA-----v~n~q~s~P~~~-----~y----se~l~~lik~mlqvdP~qRP~i~~ll~~~d~ 299 (302)
T KOG2345|consen 246 QQGGSLALA-----VQNAQISIPNSS-----RY----SEALHQLIKSMLQVDPNQRPTIPELLSKLDD 299 (302)
T ss_pred hcCCeEEEe-----eeccccccCCCC-----Cc----cHHHHHHHHHHhcCCcccCCCHHHHHHHHHh
Confidence 543321100 001111111111 12 2578899999999999999999999988764
No 110
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=7.8e-38 Score=335.73 Aligned_cols=256 Identities=19% Similarity=0.297 Sum_probs=195.8
Q ss_pred hCcCcCCcccccCCcEEEEEEEC-CCc----EEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLD-NHQ----YVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLV 587 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~-~~~----~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~l 587 (834)
++|...+.||+|+||.||+|... ++. .+++|.+..........++..|+..+++++|||||+++|++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence 35667788999999999999863 343 4778877544333444678889999999999999999999864 45778
Q ss_pred EEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecc
Q 003278 588 IYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAE 667 (834)
Q Consensus 588 v~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~ 667 (834)
++||+++|+|.+++.... ..++|.....++.|++.||+|||+ .+++||||||+|||+++++.+|++|||+++
T Consensus 86 i~e~~~~gsL~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~kl~Dfg~~~ 157 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHR-----DSLDPQRLLNWCVQIAKGMYYLEE---HRMVHRNLAARNILLKSDSIVQIADFGVAD 157 (279)
T ss_pred EEEeCCCCcHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEEcCCccce
Confidence 999999999999986533 248899999999999999999996 689999999999999999999999999998
Q ss_pred ccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhc
Q 003278 668 FLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARK 746 (834)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~ 746 (834)
.+...... .......|+..|+|||++.++.++.++|||||||++|||+| |+.|+....+.. ....+ ....
T Consensus 158 ~~~~~~~~-----~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~-~~~~~---~~~~ 228 (279)
T cd05111 158 LLYPDDKK-----YFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE-VPDLL---EKGE 228 (279)
T ss_pred eccCCCcc-----cccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH-HHHHH---HCCC
Confidence 65432210 11223567889999999999999999999999999999998 988886443321 11111 1111
Q ss_pred CccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccC
Q 003278 747 RPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGN 797 (834)
Q Consensus 747 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~ 797 (834)
.+ ..+ .... ..+..++.+||+.||++|||+.++++.|...
T Consensus 229 ~~----~~~----~~~~---~~~~~li~~c~~~~p~~Rps~~el~~~l~~~ 268 (279)
T cd05111 229 RL----AQP----QICT---IDVYMVMVKCWMIDENVRPTFKELANEFTRM 268 (279)
T ss_pred cC----CCC----CCCC---HHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 11 111 1111 2345566799999999999999999988653
No 111
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.1e-37 Score=329.88 Aligned_cols=252 Identities=25% Similarity=0.411 Sum_probs=197.9
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEcc
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYM 190 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 190 (834)
++|+..+.||+|+||.||+|.+. ++..+|+|.+... ....+.|.+|+.++++++||||++++++|...+..++||||+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~ 81 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFM 81 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcC
Confidence 45778889999999999999984 5678999987643 233567899999999999999999999999999999999999
Q ss_pred CCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhh
Q 003278 191 PNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEH 270 (834)
Q Consensus 191 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~ 270 (834)
++|+|.+++.... ..++|..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 82 ~~~~L~~~~~~~~------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~ 152 (256)
T cd05114 82 ENGCLLNYLRQRQ------GKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLD 152 (256)
T ss_pred CCCcHHHHHHhCc------cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCC
Confidence 9999999986432 3588999999999999999999985 999999999999999999999999999875422
Q ss_pred hhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCccchHHHH
Q 003278 271 ELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQIILLDW 349 (834)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~~l~~~ 349 (834)
... .......++..|+|||.+... .++.++|||||||++|||+| |+.|+..... ......
T Consensus 153 ~~~---------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~---~~~~~~ 213 (256)
T cd05114 153 DEY---------------TSSSGAKFPVKWSPPEVFNFS-KYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN---YEVVEM 213 (256)
T ss_pred Cce---------------eccCCCCCchhhCChhhcccC-ccchhhhhHHHHHHHHHHHcCCCCCCCCCCH---HHHHHH
Confidence 100 001222356789999998644 67899999999999999999 8888854321 112222
Q ss_pred HHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhh
Q 003278 350 IRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVS 406 (834)
Q Consensus 350 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~ 406 (834)
+. .+... ..+.. ....+..++.+||+.+|++||+|.++++.|+
T Consensus 214 i~----~~~~~--~~~~~--------~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 214 IS----RGFRL--YRPKL--------ASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred HH----CCCCC--CCCCC--------CCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 11 11111 01111 1246789999999999999999999998763
No 112
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.2e-37 Score=390.27 Aligned_cols=268 Identities=25% Similarity=0.464 Sum_probs=212.2
Q ss_pred cccHHHHHHHhhCcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEe
Q 003278 502 EISFKEIISATNNFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCT 580 (834)
Q Consensus 502 ~~~~~el~~at~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~ 580 (834)
.++++++. ..|...+.||+|+||.||+|.. .++..||||++..... ....|++.|++++|||||+++|+|.
T Consensus 682 ~~~~~~~~---~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~l~~l~HpnIv~~~~~~~ 753 (968)
T PLN00113 682 SITINDIL---SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-----IPSSEIADMGKLQHPNIVKLIGLCR 753 (968)
T ss_pred hhhHHHHH---hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-----ccHHHHHHHhhCCCCCcceEEEEEE
Confidence 34555544 4577788999999999999996 5788999999864322 1234688999999999999999999
Q ss_pred eCCeEEEEEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceE
Q 003278 581 EQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRL 660 (834)
Q Consensus 581 ~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki 660 (834)
+.+..++||||+++|+|.+++.. ++|..+.+|+.|+|+||+|||+.+.++|+||||||+||+++.++.+++
T Consensus 754 ~~~~~~lv~Ey~~~g~L~~~l~~---------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~ 824 (968)
T PLN00113 754 SEKGAYLIHEYIEGKNLSEVLRN---------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHL 824 (968)
T ss_pred cCCCCEEEEeCCCCCcHHHHHhc---------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEE
Confidence 99999999999999999999842 789999999999999999999766689999999999999999998888
Q ss_pred eeeeeccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCch-hHHHHH
Q 003278 661 GSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEG-LLVKRV 739 (834)
Q Consensus 661 ~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~-~~~~~~ 739 (834)
. ||.+..... .....||++|||||++.+..++.++|||||||++|||+||+.|++...... ....+.
T Consensus 825 ~-~~~~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~ 892 (968)
T PLN00113 825 R-LSLPGLLCT-----------DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWA 892 (968)
T ss_pred E-ecccccccc-----------CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHH
Confidence 6 666543211 112368899999999999999999999999999999999999986443322 222222
Q ss_pred HHHHhhcCccccccccccCC--CCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccCCc
Q 003278 740 HEFEARKRPLAELVDLSLNG--EYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGNDK 799 (834)
Q Consensus 740 ~~~~~~~~~~~~~~d~~l~~--~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~~~ 799 (834)
.. .........++|+.+.. ....++..++++++.+||+.||++||||.||++.|+.+.+
T Consensus 893 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 893 RY-CYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred HH-hcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 22 11122234456665543 2345677788999999999999999999999999987654
No 113
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.1e-38 Score=342.98 Aligned_cols=252 Identities=25% Similarity=0.361 Sum_probs=209.1
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecc--cChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCE-EEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQ-LLLVY 187 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~--~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~-~~lV~ 187 (834)
++|...+++|+|+||.++.++.+.+++.+++|.+.- ..+..++...+|+.++++++|||||.+++.|.+++. ++|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 568888999999999999999999999999998753 345556678899999999999999999999999998 99999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhh
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARW 267 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 267 (834)
+||+||+|.+.+.+.+ ...++.+.+..++.|++.|+.|||+. .|+|||||++||+++.+..+||.|||+|+.
T Consensus 84 ~Y~eGg~l~~~i~~~k-----~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~ 155 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQK-----GVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKI 155 (426)
T ss_pred eecCCCCHHHHHHHHh-----hccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhh
Confidence 9999999999997654 34688999999999999999999974 999999999999999999999999999998
Q ss_pred hhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHH
Q 003278 268 LEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347 (834)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~ 347 (834)
+..+.. ...++.||+.||.||.+.+ ..|..|+|||||||++|||++-+++|...... .|
T Consensus 156 l~~~~~----------------~a~tvvGTp~YmcPEil~d-~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~---~L- 214 (426)
T KOG0589|consen 156 LNPEDS----------------LASTVVGTPYYMCPEILSD-IPYNEKSDIWSLGCCLYEMCTLKPAFKASNMS---EL- 214 (426)
T ss_pred cCCchh----------------hhheecCCCcccCHHHhCC-CCCCccCcchhhcchHHHHHhcccccCccchH---HH-
Confidence 765421 1456789999999998864 57899999999999999999999999764322 12
Q ss_pred HHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 348 DWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 348 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
+.+... ..-..++ +.+ ...+..|+..|++.+|..||+..+++..
T Consensus 215 --i~ki~~------~~~~Plp-~~y----s~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 215 --ILKINR------GLYSPLP-SMY----SSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred --HHHHhh------ccCCCCC-ccc----cHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 222211 1111121 122 2357889999999999999999999875
No 114
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=7.4e-38 Score=348.98 Aligned_cols=216 Identities=24% Similarity=0.361 Sum_probs=175.2
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC---hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVY 187 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 187 (834)
++|+..+.||+|+||+||+|....+++.||||++.... ......+.+|+.++.+++||||+++++++.+.+.+|+||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 47888999999999999999998899999999986532 223456788999999999999999999999999999999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhh
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARW 267 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 267 (834)
||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 81 E~~~gg~L~~~l~~~-------~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~ 150 (363)
T cd05628 81 EFLPGGDMMTLLMKK-------DTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTG 150 (363)
T ss_pred cCCCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCccc
Confidence 999999999998643 4588999999999999999999985 999999999999999999999999999986
Q ss_pred hhhhhhhhh-h------cc-------cccc-c----ccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHH
Q 003278 268 LEHELQYQM-R------TS-------SARN-H----QFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEV 328 (834)
Q Consensus 268 ~~~~~~~~~-~------~~-------~~~~-~----~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~El 328 (834)
+........ . +. .... . ..........+||+.|+|||.+... .++.++|||||||++|||
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~-~~~~~~DvwSlGvil~el 229 (363)
T cd05628 151 LKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQT-GYNKLCDWWSLGVIMYEM 229 (363)
T ss_pred ccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCC-CCCCchhhhhhHHHHHHH
Confidence 532110000 0 00 0000 0 0000012346799999999998654 678999999999999999
Q ss_pred HhCCccCCC
Q 003278 329 VSGRRAVDL 337 (834)
Q Consensus 329 ltG~~p~~~ 337 (834)
+||+.||..
T Consensus 230 l~G~~Pf~~ 238 (363)
T cd05628 230 LIGYPPFCS 238 (363)
T ss_pred HhCCCCCCC
Confidence 999999964
No 115
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=9.6e-38 Score=334.46 Aligned_cols=264 Identities=25% Similarity=0.425 Sum_probs=202.1
Q ss_pred hhcCCCCCCCeeeccCCeEEEEEEEC-----CCCeEEEEEEecccC-hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCC
Q 003278 108 IGSNGFDEDEVLGSGGFGKVYRAVLP-----SDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHED 181 (834)
Q Consensus 108 ~~t~~f~~~~~LG~G~fG~Vy~~~~~-----~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~ 181 (834)
.++++|+..+.||+|+||.||+|.+. .++..||||.+.... ......|.+|+.+++.++||||+++++++...+
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~ 82 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 82 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 35678999999999999999999864 235789999886432 234567899999999999999999999999999
Q ss_pred EEEEEEEccCCCCHhHHHhcCCCccc---cCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceE
Q 003278 182 QLLLVYDYMPNRSLDRVLFRRPENLE---AAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNAR 258 (834)
Q Consensus 182 ~~~lV~Ey~~~gsL~~~l~~~~~~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~k 258 (834)
..++||||+++|+|.+++........ ....++|..+..++.|+++||.|||+. +++||||||+|||+++++.+|
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~~ 159 (277)
T cd05062 83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVK 159 (277)
T ss_pred CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCEE
Confidence 99999999999999999865322111 124578999999999999999999985 999999999999999999999
Q ss_pred EeeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCC
Q 003278 259 LGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDL 337 (834)
Q Consensus 259 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~ 337 (834)
|+|||+++.+...... .......+++.|+|||++..+ .++.++|||||||++|||+| |..|+..
T Consensus 160 l~dfg~~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~~~~~p~~~ 224 (277)
T cd05062 160 IGDFGMTRDIYETDYY--------------RKGGKGLLPVRWMSPESLKDG-VFTTYSDVWSFGVVLWEIATLAEQPYQG 224 (277)
T ss_pred ECCCCCccccCCccee--------------ecCCCCccCHhhcChhHhhcC-CcCchhHHHHHHHHHHHHHcCCCCCCCC
Confidence 9999998754321110 001123467889999998654 57999999999999999999 6777753
Q ss_pred CCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhh
Q 003278 338 TYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVS 406 (834)
Q Consensus 338 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~ 406 (834)
... .....++ .++..... . . .....+.+++.+|++.+|++||++.++++.|+
T Consensus 225 ~~~---~~~~~~~----~~~~~~~~-----~-~----~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 225 MSN---EQVLRFV----MEGGLLDK-----P-D----NCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred CCH---HHHHHHH----HcCCcCCC-----C-C----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 211 1111111 11111111 0 1 11246889999999999999999999999875
No 116
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-38 Score=337.59 Aligned_cols=256 Identities=20% Similarity=0.304 Sum_probs=199.5
Q ss_pred hhCcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCCC--hhHHHHHHHHHHHHHhc-cCCCceeEEEEEeeCCeEEE
Q 003278 512 TNNFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKC--PALRTRFSNELQNLARL-RHRNLVQLCGWCTEQGEMLV 587 (834)
Q Consensus 512 t~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~--~~~~~~f~~E~~~l~~l-~HpNiv~l~g~~~~~~~~~l 587 (834)
..+|.=.+.||+|+|.+||+|.- +.+..+|||++..... +...+....|=.+|.+| .||-||+|+--|.+...+|+
T Consensus 72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYF 151 (604)
T KOG0592|consen 72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYF 151 (604)
T ss_pred hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEE
Confidence 34566677899999999999984 5688999998864321 11123456788899999 89999999999999999999
Q ss_pred EEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecc
Q 003278 588 IYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAE 667 (834)
Q Consensus 588 v~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~ 667 (834)
|+||+++|+|.+++.+.+ .++.....-+|.+|..||+|||+ .|||||||||+|||||+||.+||+|||-|+
T Consensus 152 vLe~A~nGdll~~i~K~G------sfde~caR~YAAeIldAleylH~---~GIIHRDlKPENILLd~dmhikITDFGsAK 222 (604)
T KOG0592|consen 152 VLEYAPNGDLLDLIKKYG------SFDETCARFYAAEILDALEYLHS---NGIIHRDLKPENILLDKDGHIKITDFGSAK 222 (604)
T ss_pred EEEecCCCcHHHHHHHhC------cchHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeEcCCCcEEEeeccccc
Confidence 999999999999998764 36766667799999999999996 799999999999999999999999999999
Q ss_pred ccccCCCC------CcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHH
Q 003278 668 FLTRNDHG------HRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHE 741 (834)
Q Consensus 668 ~~~~~~~~------~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~ 741 (834)
.+...... ...+.+...+++||..|.+||++..+..+..+|+|+|||+||+|++|+.||...... ...+.+..
T Consensus 223 ~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ney-liFqkI~~ 301 (604)
T KOG0592|consen 223 ILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEY-LIFQKIQA 301 (604)
T ss_pred cCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHH-HHHHHHHH
Confidence 87654222 111222236799999999999999999999999999999999999999999754322 22233322
Q ss_pred HHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 742 FEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 742 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
. |..++..++ +.+..|++ +-+..||.+|+|..+|-+
T Consensus 302 l-----------~y~fp~~fp-~~a~dLv~---KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 302 L-----------DYEFPEGFP-EDARDLIK---KLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred h-----------cccCCCCCC-HHHHHHHH---HHHccCccccccHHHHhh
Confidence 2 112222333 44455554 567799999999988765
No 117
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-38 Score=310.29 Aligned_cols=248 Identities=21% Similarity=0.349 Sum_probs=200.8
Q ss_pred hCcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCCC--hhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKC--PALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIY 589 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~--~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~ 589 (834)
++|...+.+|.|.||.||.|.. .++-.||+|++-.+.- ....+++.+|+++-++|+||||+++||++.+....||++
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLil 101 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLIL 101 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEE
Confidence 5788899999999999999996 4577899999764432 223467899999999999999999999999999999999
Q ss_pred eccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccc
Q 003278 590 DYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFL 669 (834)
Q Consensus 590 Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~ 669 (834)
||.++|.|...|.+.... .++....-.++.|+|.||.|+|. +.||||||||+|+|++.++..||+|||.+..-
T Consensus 102 Eya~~gel~k~L~~~~~~----~f~e~~~a~Yi~q~A~Al~y~h~---k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~ 174 (281)
T KOG0580|consen 102 EYAPRGELYKDLQEGRMK----RFDEQRAATYIKQLANALLYCHL---KRVIHRDIKPENLLLGSAGELKIADFGWSVHA 174 (281)
T ss_pred EecCCchHHHHHHhcccc----cccccchhHHHHHHHHHHHHhcc---CCcccCCCCHHHhccCCCCCeeccCCCceeec
Confidence 999999999999854321 24455555799999999999996 79999999999999999999999999998653
Q ss_pred ccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCcc
Q 003278 670 TRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPL 749 (834)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 749 (834)
+ .....+.|||..|.+||+..+..++.++|+|++||+.||++.|..||.... .+...+++....
T Consensus 175 p---------~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~-~~etYkrI~k~~------ 238 (281)
T KOG0580|consen 175 P---------SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS-HSETYKRIRKVD------ 238 (281)
T ss_pred C---------CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh-hHHHHHHHHHcc------
Confidence 2 223456899999999999999999999999999999999999999998655 444444443321
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 750 AELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 750 ~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
+.+| ... ..+ ...++.+|+..+|.+|.+..||+.
T Consensus 239 --~~~p---~~i-s~~---a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 239 --LKFP---STI-SGG---AADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred --ccCC---ccc-Chh---HHHHHHHHhccCccccccHHHHhh
Confidence 1112 111 123 334556899999999999999985
No 118
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9e-38 Score=330.20 Aligned_cols=261 Identities=25% Similarity=0.333 Sum_probs=200.0
Q ss_pred hhcCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccCh--------------hhHHHHHHHHHHHHhCCCCceeeE
Q 003278 108 IGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGE--------------RFEKTFAAELVAVAHLRHRNLVRL 173 (834)
Q Consensus 108 ~~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~--------------~~~~~~~~E~~~l~~l~H~nIv~l 173 (834)
+..|.|+..+.||+|.||.|-+|+...+++.||||++.++.. ...+...+||.+|++++|||||+|
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 455889999999999999999999999999999999865321 112567899999999999999999
Q ss_pred eeeEEeC--CEEEEEEEccCCCCHhHHHhcCCCccccCCC-CCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceE
Q 003278 174 RGWCVHE--DQLLLVYDYMPNRSLDRVLFRRPENLEAAAP-LNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVM 250 (834)
Q Consensus 174 ~g~~~~~--~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~-l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIL 250 (834)
+.+..+. +.+|||+|||..|.+... . ...+ |++.+.++|+++++.||+|||.+ +||||||||+|+|
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~---p-----~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLL 242 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWC---P-----PDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLL 242 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccC---C-----CCcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheE
Confidence 9998765 469999999999887432 1 1234 89999999999999999999998 9999999999999
Q ss_pred ECCCCceEEeeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCC---CCCcccceeehhhHHHH
Q 003278 251 LDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGS---VATAKSDVFSFGIVVLE 327 (834)
Q Consensus 251 ld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~---~~~~ksDV~SfGvvl~E 327 (834)
|++++++||+|||.+....... ..... ..-....|||.|||||.+..+. ..+.+.||||+||+||.
T Consensus 243 l~~~g~VKIsDFGVs~~~~~~~--------~~~~d---~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYC 311 (576)
T KOG0585|consen 243 LSSDGTVKISDFGVSNEFPQGS--------DEGSD---DQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYC 311 (576)
T ss_pred EcCCCcEEeeccceeeecccCC--------ccccH---HHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHH
Confidence 9999999999999987542110 00000 0122357999999999987632 44678999999999999
Q ss_pred HHhCCccCCCCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhh
Q 003278 328 VVSGRRAVDLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVS 406 (834)
Q Consensus 328 lltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~ 406 (834)
|+.|+-||-..+ ......++ +..++.-...+ +..+.+.+|++.-|..||+.|-+..+|.....
T Consensus 312 llfG~~PF~~~~------~~~l~~KI---------vn~pL~fP~~p-e~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpw 374 (576)
T KOG0585|consen 312 LLFGQLPFFDDF------ELELFDKI---------VNDPLEFPENP-EINEDLKDLIKRLLEKDPEQRITLPDIKLHPW 374 (576)
T ss_pred hhhccCCcccch------HHHHHHHH---------hcCcccCCCcc-cccHHHHHHHHHHhhcChhheeehhhheecce
Confidence 999999985421 11212221 12222211221 23456788999999999999999998876543
No 119
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.1e-37 Score=343.85 Aligned_cols=261 Identities=23% Similarity=0.312 Sum_probs=199.2
Q ss_pred CcCcCCcccccCCcEEEEEEEC------CCcEEEEEEecCCCChhHHHHHHHHHHHHHhc-cCCCceeEEEEEee-CCeE
Q 003278 514 NFSESQRVAEMDFGTAYQGFLD------NHQYVLVKRLGMSKCPALRTRFSNELQNLARL-RHRNLVQLCGWCTE-QGEM 585 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l-~HpNiv~l~g~~~~-~~~~ 585 (834)
.|...+.||+|+||.||+|... .+..||+|++.........+.+.+|+.++.++ +||||++++++|.. ....
T Consensus 8 ~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~ 87 (337)
T cd05054 8 RLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPL 87 (337)
T ss_pred HhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCE
Confidence 4666788999999999999642 24689999987554444446788899999999 89999999998865 4568
Q ss_pred EEEEeccCCCchhhhhhcCCCC-------------------------------------------------------CCC
Q 003278 586 LVIYDYSATRILSHLLFHNNHR-------------------------------------------------------IGH 610 (834)
Q Consensus 586 ~lv~Ey~~~g~L~~~l~~~~~~-------------------------------------------------------~~~ 610 (834)
+++|||+++|+|.+++...... ...
T Consensus 88 ~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (337)
T cd05054 88 MVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYK 167 (337)
T ss_pred EEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhh
Confidence 8999999999999988643210 001
Q ss_pred cccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCCCCcccccCcccccccc
Q 003278 611 SILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIF 690 (834)
Q Consensus 611 ~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~ 690 (834)
..++|..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++.+..... ........|+.
T Consensus 168 ~~l~~~~~~~~~~qi~~aL~~lH~---~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~-----~~~~~~~~~~~ 239 (337)
T cd05054 168 EPLTLEDLISYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-----YVRKGDARLPL 239 (337)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEeCCCcEEEeccccchhcccCcc-----hhhccCCCCCc
Confidence 258999999999999999999996 6999999999999999999999999999987543211 01122345678
Q ss_pred CccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcCccccccccccCCCCCHHHHHHH
Q 003278 691 GYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRL 769 (834)
Q Consensus 691 ~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l 769 (834)
.|||||++.+..++.++|||||||+||||+| |..|+....+...+...... .... . .... ....+
T Consensus 240 ~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~---~~~~---~----~~~~----~~~~~ 305 (337)
T cd05054 240 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKE---GTRM---R----APEY----ATPEI 305 (337)
T ss_pred cccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhc---cCCC---C----CCcc----CCHHH
Confidence 8999999999999999999999999999998 98888653333222211111 0110 0 0111 12346
Q ss_pred HHHHHHhccCCCCCCCChhHHHHHHcc
Q 003278 770 IKLGIACTLSNPELRPSMRQILSILDG 796 (834)
Q Consensus 770 ~~l~~~C~~~~P~~RPtm~~v~~~L~~ 796 (834)
.+++.+||+.+|++|||+.+|++.|+.
T Consensus 306 ~~l~~~cl~~~p~~RPs~~ell~~l~~ 332 (337)
T cd05054 306 YSIMLDCWHNNPEDRPTFSELVEILGD 332 (337)
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 677889999999999999999999864
No 120
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=4e-38 Score=345.72 Aligned_cols=244 Identities=24% Similarity=0.293 Sum_probs=192.4
Q ss_pred CeeeccCCeEEEEEEECCCCeEEEEEEeccc---ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEccCCC
Q 003278 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK---GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNR 193 (834)
Q Consensus 117 ~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 193 (834)
+.||+|+||.||++....+|..||+|.+... .......+.+|+.++..++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 4799999999999999889999999998653 2233456788999999999999999999999999999999999999
Q ss_pred CHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhhh
Q 003278 194 SLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQ 273 (834)
Q Consensus 194 sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~ 273 (834)
+|..++... ..+++..+..++.|++.||.|||+. .+|+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~L~~~l~~~-------~~l~~~~~~~~~~qi~~aL~~lH~~--~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~- 150 (325)
T cd05594 81 ELFFHLSRE-------RVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG- 150 (325)
T ss_pred cHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC-
Confidence 999888543 3589999999999999999999972 389999999999999999999999999987421110
Q ss_pred hhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHHHHH
Q 003278 274 YQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIRRL 353 (834)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~~~~ 353 (834)
.......||+.|+|||.+..+ .++.++|||||||++|||+||+.||...... .+. ...
T Consensus 151 ---------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tG~~Pf~~~~~~---~~~---~~i 208 (325)
T cd05594 151 ---------------ATMKTFCGTPEYLAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---KLF---ELI 208 (325)
T ss_pred ---------------cccccccCCcccCCHHHHccC-CCCCccccccccceeeeeccCCCCCCCCCHH---HHH---HHH
Confidence 012345699999999998654 6789999999999999999999998643211 111 111
Q ss_pred hhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCC-----chhhHHHH
Q 003278 354 SDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRP-----SMKWVIEA 404 (834)
Q Consensus 354 ~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RP-----sm~~V~~~ 404 (834)
.. +. ..+. ... ...+.++...|++.||++|| ++.++++.
T Consensus 209 ~~-~~------~~~p-~~~----~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 209 LM-EE------IRFP-RTL----SPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred hc-CC------CCCC-CCC----CHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 11 11 0111 111 13577899999999999997 78887754
No 121
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.6e-37 Score=332.67 Aligned_cols=262 Identities=22% Similarity=0.327 Sum_probs=200.7
Q ss_pred HhhCcCcCCcccccCCcEEEEEEEC------CCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCe
Q 003278 511 ATNNFSESQRVAEMDFGTAYQGFLD------NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGE 584 (834)
Q Consensus 511 at~~f~~~~~ig~g~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~ 584 (834)
++++|...+.||+|+||.||+|... .+..||||.+..........+|.+|+.++++++||||+++++++.+...
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 3567888899999999999998753 2457999988654444445679999999999999999999999999999
Q ss_pred EEEEEeccCCCchhhhhhcCCCCC----CCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceE
Q 003278 585 MLVIYDYSATRILSHLLFHNNHRI----GHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRL 660 (834)
Q Consensus 585 ~~lv~Ey~~~g~L~~~l~~~~~~~----~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki 660 (834)
.++||||+++|+|.+++....... ....++|..++.++.|++.||+|||+ .+++||||||+|||+++++.+|+
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCcchheEEEcCCCCEEE
Confidence 999999999999999986532111 12346888999999999999999996 68999999999999999999999
Q ss_pred eeeeeccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHH
Q 003278 661 GSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRV 739 (834)
Q Consensus 661 ~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~ 739 (834)
+|||+++.+...... .......+++.|||||++.++.++.++|||||||++|||+| |..|+....+. ......
T Consensus 161 ~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~-~~~~~~ 234 (277)
T cd05062 161 GDFGMTRDIYETDYY-----RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE-QVLRFV 234 (277)
T ss_pred CCCCCccccCCccee-----ecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHH
Confidence 999998754332210 01112346788999999998999999999999999999999 67777543222 222211
Q ss_pred HHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHc
Q 003278 740 HEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795 (834)
Q Consensus 740 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~ 795 (834)
.. ..... .... .+. .+..++.+||+.+|++|||+.++++.|+
T Consensus 235 ~~-----~~~~~-----~~~~-~~~---~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 235 ME-----GGLLD-----KPDN-CPD---MLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred Hc-----CCcCC-----CCCC-CCH---HHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 11 11111 1111 122 4556677999999999999999999885
No 122
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.1e-37 Score=343.21 Aligned_cols=253 Identities=25% Similarity=0.330 Sum_probs=195.4
Q ss_pred CCCCCCeeeccCCeEEEEEEEC---CCCeEEEEEEeccc----ChhhHHHHHHHHHHHHhC-CCCceeeEeeeEEeCCEE
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLP---SDGTVVAVKCLAEK----GERFEKTFAAELVAVAHL-RHRNLVRLRGWCVHEDQL 183 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~---~~g~~vAvK~l~~~----~~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~~~ 183 (834)
+|+..+.||+|+||.||+++.. .+|+.||+|++.+. .....+.+..|+.++.++ +||||+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 4778899999999999998863 46899999998642 223345678899999999 599999999999999999
Q ss_pred EEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeecc
Q 003278 184 LLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFG 263 (834)
Q Consensus 184 ~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 263 (834)
++||||+++|+|.+++..+ ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 81 ~lv~e~~~~g~L~~~l~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG 150 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQR-------DNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFG 150 (332)
T ss_pred EEEEeCCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCc
Confidence 9999999999999998643 3588999999999999999999985 99999999999999999999999999
Q ss_pred chhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCcc
Q 003278 264 LARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQ 343 (834)
Q Consensus 264 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~ 343 (834)
+++...... ........||+.|||||.+.....++.++|||||||++|||+||+.||........
T Consensus 151 ~~~~~~~~~---------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~ 215 (332)
T cd05614 151 LSKEFLSEE---------------KERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT 215 (332)
T ss_pred CCccccccC---------------CCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC
Confidence 997532110 00123457999999999986544578899999999999999999999965432221
Q ss_pred chHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCC-----chhhHHH
Q 003278 344 IILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRP-----SMKWVIE 403 (834)
Q Consensus 344 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RP-----sm~~V~~ 403 (834)
. ......... .++.+. ... ...+.++...||+.||++|| ++.++++
T Consensus 216 ~--~~~~~~~~~-------~~~~~~-~~~----~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 216 Q--SEVSRRILK-------CDPPFP-SFI----GPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred H--HHHHHHHhc-------CCCCCC-CCC----CHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 1 111111111 111111 111 13567899999999999999 5556554
No 123
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.1e-37 Score=330.85 Aligned_cols=254 Identities=20% Similarity=0.347 Sum_probs=200.6
Q ss_pred hCcCcCCcccccCCcEEEEEEECCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEecc
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYS 592 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~ 592 (834)
++|...++||+|+||.||+|...++..||+|.+.... ...+.|.+|+.++++++||||+++++++.+.+..+++|||+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT--MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc--hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 4577778999999999999998888889999876432 23467999999999999999999999999999999999999
Q ss_pred CCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccC
Q 003278 593 ATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRN 672 (834)
Q Consensus 593 ~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~ 672 (834)
++|+|.+++.... ...+++..++.++.|++.||+|||+ .+++||||||+||++++++.+||+|||++......
T Consensus 84 ~~~~L~~~l~~~~----~~~~~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05072 84 AKGSLLDFLKSDE----GGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDN 156 (261)
T ss_pred CCCcHHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEecCCCcEEECCCccceecCCC
Confidence 9999999986532 1247888999999999999999996 68999999999999999999999999999765322
Q ss_pred CCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcCcccc
Q 003278 673 DHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRPLAE 751 (834)
Q Consensus 673 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (834)
.. .......++..|+|||++..+.++.++|||||||++|||+| |..|+....+.. ....+.. . ...
T Consensus 157 ~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~-~~~~~~~---~-~~~-- 223 (261)
T cd05072 157 EY------TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD-VMSALQR---G-YRM-- 223 (261)
T ss_pred ce------eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH-HHHHHHc---C-CCC--
Confidence 10 11122346778999999998899999999999999999999 888875433222 1111111 0 000
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHcc
Q 003278 752 LVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDG 796 (834)
Q Consensus 752 ~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~ 796 (834)
...... + ..+.+++.+||..+|++|||+.+|.+.|+.
T Consensus 224 ----~~~~~~-~---~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 224 ----PRMENC-P---DELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred ----CCCCCC-C---HHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 011111 1 235567779999999999999999999974
No 124
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=2.7e-37 Score=339.39 Aligned_cols=245 Identities=22% Similarity=0.317 Sum_probs=192.2
Q ss_pred CeeeccCCeEEEEEEECCCCeEEEEEEecccC---hhhHHHHHHHHHHHHhC-CCCceeeEeeeEEeCCEEEEEEEccCC
Q 003278 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAELVAVAHL-RHRNLVRLRGWCVHEDQLLLVYDYMPN 192 (834)
Q Consensus 117 ~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 192 (834)
+.||+|+||.||+|....+++.||||++.... ....+.+..|+.++.++ +||||+++++++...+.+++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 47999999999999998899999999987532 23345678899999888 699999999999999999999999999
Q ss_pred CCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhh
Q 003278 193 RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHEL 272 (834)
Q Consensus 193 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~ 272 (834)
|+|..++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~L~~~~~~~-------~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~- 149 (327)
T cd05617 81 GDLMFHMQRQ-------RKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP- 149 (327)
T ss_pred CcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCC-
Confidence 9999887542 3589999999999999999999985 9999999999999999999999999998642110
Q ss_pred hhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHHHH
Q 003278 273 QYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIRR 352 (834)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~~~ 352 (834)
........||+.|+|||++... .++.++|||||||++|||+||+.||+............++..
T Consensus 150 ---------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~ 213 (327)
T cd05617 150 ---------------GDTTSTFCGTPNYIAPEILRGE-EYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQ 213 (327)
T ss_pred ---------------CCceecccCCcccCCHHHHCCC-CCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHH
Confidence 0012346799999999998654 678999999999999999999999975433222222233332
Q ss_pred HhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchh
Q 003278 353 LSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMK 399 (834)
Q Consensus 353 ~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~ 399 (834)
....... ++. ...+ ..+.+++..||+.||.+||++.
T Consensus 214 ~~~~~~~------~~p-~~~~----~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 214 VILEKPI------RIP-RFLS----VKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred HHHhCCC------CCC-CCCC----HHHHHHHHHHhccCHHHcCCCC
Confidence 2221110 111 1111 3567899999999999999864
No 125
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.3e-38 Score=341.38 Aligned_cols=246 Identities=24% Similarity=0.340 Sum_probs=195.6
Q ss_pred CcCcCCcccccCCcEEEEEEEC-CCcEEEEEEecCCCCh-hHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEec
Q 003278 514 NFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSKCP-ALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY 591 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~-~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey 591 (834)
+|...+.||+|+||.||||+.+ +.+.||+|.+...... ...+.+.+|++++++|+|||||.++.+|....++++|.||
T Consensus 3 ~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~ 82 (808)
T KOG0597|consen 3 QYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEY 82 (808)
T ss_pred chhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehh
Confidence 4555677999999999999964 4788999998765433 3456688999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccccc
Q 003278 592 SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTR 671 (834)
Q Consensus 592 ~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~ 671 (834)
+.+ +|..+|...+ .|++.....|+.++..||.|||+ .+|+|||+||.||||++.+++|+||||+|+....
T Consensus 83 a~g-~L~~il~~d~------~lpEe~v~~~a~~LVsaL~yLhs---~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~ 152 (808)
T KOG0597|consen 83 AVG-DLFTILEQDG------KLPEEQVRAIAYDLVSALYYLHS---NRILHRDMKPQNILLEKGGTLKLCDFGLARAMST 152 (808)
T ss_pred hhh-hHHHHHHhcc------CCCHHHHHHHHHHHHHHHHHHHh---cCcccccCCcceeeecCCCceeechhhhhhhccc
Confidence 998 9999997654 38888889999999999999997 6999999999999999999999999999987543
Q ss_pred CCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCcccc
Q 003278 672 NDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAE 751 (834)
Q Consensus 672 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (834)
+ +...+++.||+.|||||.+.+++|+..+|.||+||+||||.+|+.||....-. ..+.... ..+
T Consensus 153 ~-------t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~----~Lv~~I~--~d~--- 216 (808)
T KOG0597|consen 153 N-------TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSIT----QLVKSIL--KDP--- 216 (808)
T ss_pred C-------ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHH----HHHHHHh--cCC---
Confidence 2 23346789999999999999999999999999999999999999998643211 1111111 111
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 752 LVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 752 ~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
... +.+.-..++.+.---+..||.+|-|-.+++.
T Consensus 217 ----v~~---p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 217 ----VKP---PSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred ----CCC---cccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 111 1111122333333567789999999888764
No 126
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=1.6e-37 Score=333.92 Aligned_cols=267 Identities=20% Similarity=0.272 Sum_probs=194.6
Q ss_pred CcCCcccccCCcEEEEEEE-----CCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeC--CeEEEE
Q 003278 516 SESQRVAEMDFGTAYQGFL-----DNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQ--GEMLVI 588 (834)
Q Consensus 516 ~~~~~ig~g~~g~vy~~~~-----~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~--~~~~lv 588 (834)
...+.||+|+||+||.+.. .++..||+|.+...........|.+|+++|++++||||++++++|... ...++|
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 5567899999999987653 356789999987654444567889999999999999999999988653 458899
Q ss_pred EeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccc
Q 003278 589 YDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEF 668 (834)
Q Consensus 589 ~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~ 668 (834)
|||+++|+|.+++... .++|..+..++.|++.||+|||+ .+|+||||||+|||+++++.+|++|||+++.
T Consensus 87 ~e~~~~~~l~~~~~~~-------~l~~~~~~~i~~~l~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~ 156 (283)
T cd05080 87 MEYVPLGSLRDYLPKH-------KLNLAQLLLFAQQICEGMAYLHS---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKA 156 (283)
T ss_pred ecCCCCCCHHHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHH---CCeeccccChheEEEcCCCcEEEeecccccc
Confidence 9999999999988542 38899999999999999999996 6899999999999999999999999999986
Q ss_pred cccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCch-hHHHHHHHHHhhcC
Q 003278 669 LTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEG-LLVKRVHEFEARKR 747 (834)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~-~~~~~~~~~~~~~~ 747 (834)
........ .......++..|+|||++.++.++.++|||||||++|||+||..|+......- ....... ......
T Consensus 157 ~~~~~~~~----~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~-~~~~~~ 231 (283)
T cd05080 157 VPEGHEYY----RVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQ-GQMTVV 231 (283)
T ss_pred cCCcchhh----ccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccc-cccchh
Confidence 54321110 00112345677999999998899999999999999999999998875322110 0000000 000000
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccC
Q 003278 748 PLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGN 797 (834)
Q Consensus 748 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~ 797 (834)
.+.+.++..............+.+++.+||+.+|++||||.+|++.|+.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~ 281 (283)
T cd05080 232 RLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM 281 (283)
T ss_pred hhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence 00111111100000001112455666799999999999999999998754
No 127
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.6e-37 Score=330.51 Aligned_cols=256 Identities=23% Similarity=0.345 Sum_probs=202.0
Q ss_pred hCcCcCCcccccCCcEEEEEEECC----CcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLDN----HQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVI 588 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv 588 (834)
++|...+.||+|+||.||+|.... ...||||.+...........|.+|+.++++++||||+++++++.+.+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 567888999999999999998743 4579999987665555667899999999999999999999999999999999
Q ss_pred EeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccc
Q 003278 589 YDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEF 668 (834)
Q Consensus 589 ~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~ 668 (834)
|||+++++|.+++.... ..++|..+..++.|++.||+|||+ .+|+||||||+|||+++++.+|++|||+++.
T Consensus 84 ~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~ 155 (266)
T cd05033 84 TEYMENGSLDKFLREND-----GKFTVGQLVGMLRGIASGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRR 155 (266)
T ss_pred EEcCCCCCHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCCEEECccchhhc
Confidence 99999999999986532 148899999999999999999996 6899999999999999999999999999987
Q ss_pred cccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcC
Q 003278 669 LTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKR 747 (834)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~ 747 (834)
........ ......++..|+|||++.+..++.++||||||+++|||+| |..|+..... ......... ...
T Consensus 156 ~~~~~~~~-----~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~-~~~~~~~~~---~~~ 226 (266)
T cd05033 156 LEDSEATY-----TTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN-QDVIKAVED---GYR 226 (266)
T ss_pred ccccccce-----eccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCH-HHHHHHHHc---CCC
Confidence 64211110 0112245678999999998899999999999999999998 8888754322 212111111 000
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHcc
Q 003278 748 PLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDG 796 (834)
Q Consensus 748 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~ 796 (834)
. + ..... + ..+.+++.+||+.+|++||++.+|++.|+.
T Consensus 227 -~-----~-~~~~~-~---~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~ 264 (266)
T cd05033 227 -L-----P-PPMDC-P---SALYQLMLDCWQKDRNERPTFSQIVSTLDK 264 (266)
T ss_pred -C-----C-CCCCC-C---HHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 0 0 01111 1 245677779999999999999999999875
No 128
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=9.7e-38 Score=343.22 Aligned_cols=244 Identities=16% Similarity=0.204 Sum_probs=192.6
Q ss_pred hCcCcCCcccccCCcEEEEEEEC-CCcEEEEEEecCCC--ChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSK--CPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIY 589 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~ 589 (834)
++|...+.||+|+||.||+|... +++.||||.+.... .....+.+.+|+.+|++++|||||++++++.+.+..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 45677788999999999999974 57899999986432 1223467889999999999999999999999999999999
Q ss_pred eccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccc
Q 003278 590 DYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFL 669 (834)
Q Consensus 590 Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~ 669 (834)
||+++|+|.+++.... .+++.....++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 98 e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 168 (329)
T PTZ00263 98 EFVVGGELFTHLRKAG------RFPNDVAKFYHAELVLAFEYLHS---KDIIYRDLKPENLLLDNKGHVKVTDFGFAKKV 168 (329)
T ss_pred cCCCCChHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEECCCCCEEEeeccCceEc
Confidence 9999999999887542 36777788899999999999997 68999999999999999999999999999764
Q ss_pred ccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCcc
Q 003278 670 TRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPL 749 (834)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 749 (834)
... .....||+.|||||++.+..++.++|||||||++|||+||..||....+.. ....+ ......
T Consensus 169 ~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-~~~~i---~~~~~~- 233 (329)
T PTZ00263 169 PDR----------TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFR-IYEKI---LAGRLK- 233 (329)
T ss_pred CCC----------cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHH-HHHHH---hcCCcC-
Confidence 321 123579999999999999999999999999999999999999986433221 11111 111111
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCC-----hhHHH
Q 003278 750 AELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPS-----MRQIL 791 (834)
Q Consensus 750 ~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPt-----m~~v~ 791 (834)
++...+ .. +..++.+||+.||++||+ +.+++
T Consensus 234 -------~p~~~~-~~---~~~li~~~L~~dP~~R~~~~~~~~~~ll 269 (329)
T PTZ00263 234 -------FPNWFD-GR---ARDLVKGLLQTDHTKRLGTLKGGVADVK 269 (329)
T ss_pred -------CCCCCC-HH---HHHHHHHHhhcCHHHcCCCCCCCHHHHh
Confidence 111111 23 345556899999999997 56655
No 129
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=7.7e-38 Score=337.96 Aligned_cols=244 Identities=17% Similarity=0.233 Sum_probs=193.5
Q ss_pred CcCcCCcccccCCcEEEEEEEC-CCcEEEEEEecCCCC--hhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEe
Q 003278 514 NFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSKC--PALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYD 590 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~--~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~E 590 (834)
+|...+.||+|+||.||+|... +++.||+|.+..... ....+.+.+|+.++++++||||+++++++.+....++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 81 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLME 81 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEe
Confidence 5677788999999999999965 588999999864321 2234568899999999999999999999999999999999
Q ss_pred ccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccc
Q 003278 591 YSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLT 670 (834)
Q Consensus 591 y~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~ 670 (834)
|+++|+|.+++.... .+++.....++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++.+.
T Consensus 82 ~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~ 152 (291)
T cd05612 82 YVPGGELFSYLRNSG------RFSNSTGLFYASEIVCALEYLHS---KEIVYRDLKPENILLDKEGHIKLTDFGFAKKLR 152 (291)
T ss_pred CCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEEecCcchhcc
Confidence 999999999986532 37888888999999999999996 699999999999999999999999999997643
Q ss_pred cCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCccc
Q 003278 671 RNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLA 750 (834)
Q Consensus 671 ~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (834)
.. .....||+.|+|||++.+..++.++|||||||++|||+||+.|+....+... ...+. .....
T Consensus 153 ~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~-~~~i~---~~~~~-- 216 (291)
T cd05612 153 DR----------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGI-YEKIL---AGKLE-- 216 (291)
T ss_pred CC----------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHH---hCCcC--
Confidence 21 1235799999999999988899999999999999999999999865433221 11111 11111
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCC-----hhHHHH
Q 003278 751 ELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPS-----MRQILS 792 (834)
Q Consensus 751 ~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPt-----m~~v~~ 792 (834)
+....+ .. +.+++.+||+.||.+||+ +.++++
T Consensus 217 ------~~~~~~-~~---~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 217 ------FPRHLD-LY---AKDLIKKLLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred ------CCccCC-HH---HHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence 111121 23 345556899999999995 666663
No 130
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=7.9e-38 Score=343.03 Aligned_cols=241 Identities=18% Similarity=0.219 Sum_probs=189.4
Q ss_pred cccccCCcEEEEEEE-CCCcEEEEEEecCCC--ChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEeccCCCc
Q 003278 520 RVAEMDFGTAYQGFL-DNHQYVLVKRLGMSK--CPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRI 596 (834)
Q Consensus 520 ~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~~g~ 596 (834)
.||+|+||.||++.. .++..||||.+.... .......+.+|+.++++++||||+++++++...+..++||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~ 81 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCc
Confidence 589999999999986 568899999986432 22234567889999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCCCC
Q 003278 597 LSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGH 676 (834)
Q Consensus 597 L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~~~ 676 (834)
|..++.... .+++.....++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 82 L~~~l~~~~------~~~~~~~~~~~~qi~~~L~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~--- 149 (323)
T cd05571 82 LFFHLSRER------VFSEDRARFYGAEIVSALGYLHS---CDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG--- 149 (323)
T ss_pred HHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC---
Confidence 998886432 47888888999999999999996 699999999999999999999999999987532111
Q ss_pred cccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCccccccccc
Q 003278 677 RKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLS 756 (834)
Q Consensus 677 ~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 756 (834)
......+||+.|||||++.+..++.++|||||||++|||+||+.||....... ..... .... ..
T Consensus 150 ----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~-~~~~~---~~~~--------~~ 213 (323)
T cd05571 150 ----ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK-LFELI---LMEE--------IR 213 (323)
T ss_pred ----CcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHH-HHHHH---HcCC--------CC
Confidence 11234679999999999999999999999999999999999999986432221 11111 1100 11
Q ss_pred cCCCCCHHHHHHHHHHHHHhccCCCCCCC-----ChhHHHH
Q 003278 757 LNGEYNHKELMRLIKLGIACTLSNPELRP-----SMRQILS 792 (834)
Q Consensus 757 l~~~~~~~~~~~l~~l~~~C~~~~P~~RP-----tm~~v~~ 792 (834)
+....+ .+ +.+++.+||+.||++|| +..++++
T Consensus 214 ~p~~~~-~~---~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 214 FPRTLS-PE---AKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred CCCCCC-HH---HHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 111222 23 44555589999999999 7888764
No 131
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=2.5e-37 Score=331.48 Aligned_cols=260 Identities=22% Similarity=0.337 Sum_probs=202.3
Q ss_pred hCcCcCCcccccCCcEEEEEEECC------CcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLDN------HQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEML 586 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~~------~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~ 586 (834)
++|...+.||+|+||.||+|...+ +..||||.+......+..+.|.+|+++|.+++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 346666889999999999998643 46899999876555545678999999999999999999999999999999
Q ss_pred EEEeccCCCchhhhhhcCCC--------CCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCc
Q 003278 587 VIYDYSATRILSHLLFHNNH--------RIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNP 658 (834)
Q Consensus 587 lv~Ey~~~g~L~~~l~~~~~--------~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ 658 (834)
+||||+++|+|.+++...+. ......+++.....++.|++.||+|||+ .+|+||||||+|||++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS---QHFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeeccccccceEEEcCCCeE
Confidence 99999999999999976432 1122357899999999999999999996 689999999999999999999
Q ss_pred eEeeeeeccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHH
Q 003278 659 RLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVK 737 (834)
Q Consensus 659 ki~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~ 737 (834)
|++|||+++.+...... .......+++.|+|||++.++.++.++|||||||++|||+| |..|+....... ...
T Consensus 162 kl~d~g~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~-~~~ 235 (280)
T cd05049 162 KIGDFGMSRDVYTTDYY-----RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE-VIE 235 (280)
T ss_pred EECCcccceecccCcce-----ecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH-HHH
Confidence 99999999754322110 01122346788999999999999999999999999999999 999886433222 111
Q ss_pred HHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHc
Q 003278 738 RVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795 (834)
Q Consensus 738 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~ 795 (834)
... ....... ... .+. .+.+++.+||+.||++|||+.||++.|+
T Consensus 236 ~~~-----~~~~~~~-----~~~-~~~---~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 236 CIT-----QGRLLQR-----PRT-CPS---EVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HHH-----cCCcCCC-----CCC-CCH---HHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 111 1111000 011 122 3556667999999999999999999885
No 132
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=8.4e-38 Score=360.71 Aligned_cols=261 Identities=23% Similarity=0.334 Sum_probs=204.2
Q ss_pred HHhhcCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc--ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCC--
Q 003278 106 LYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK--GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHED-- 181 (834)
Q Consensus 106 l~~~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~-- 181 (834)
.....++|...+.||+|+||.||+|....+|+.||||++... .......+.+|+..+..++|+||+++++.+...+
T Consensus 27 ~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~ 106 (496)
T PTZ00283 27 AKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPR 106 (496)
T ss_pred ccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceeccccc
Confidence 344557899999999999999999999889999999998643 3344567889999999999999999988776433
Q ss_pred ------EEEEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCC
Q 003278 182 ------QLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQY 255 (834)
Q Consensus 182 ------~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~ 255 (834)
.+++||||+++|+|.++|..+.. ...++++.....|+.|++.||.|||+. +|+||||||+|||++.++
T Consensus 107 ~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~---~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~ 180 (496)
T PTZ00283 107 NPENVLMIALVLDYANAGDLRQEIKSRAK---TNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNG 180 (496)
T ss_pred CcccceEEEEEEeCCCCCcHHHHHHHhhc---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCC
Confidence 37899999999999999865432 235689999999999999999999985 999999999999999999
Q ss_pred ceEEeeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccC
Q 003278 256 NARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAV 335 (834)
Q Consensus 256 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~ 335 (834)
.+||+|||+++.+..... ........||+.|+|||++... .++.++|||||||++|||+||+.||
T Consensus 181 ~vkL~DFGls~~~~~~~~--------------~~~~~~~~Gt~~Y~aPE~~~~~-~~s~k~DVwSlGvilyeLltG~~Pf 245 (496)
T PTZ00283 181 LVKLGDFGFSKMYAATVS--------------DDVGRTFCGTPYYVAPEIWRRK-PYSKKADMFSLGVLLYELLTLKRPF 245 (496)
T ss_pred CEEEEecccCeecccccc--------------ccccccccCCcceeCHHHhCCC-CCCcHHHHHHHHHHHHHHHHCCCCC
Confidence 999999999986432110 0012345799999999998654 6799999999999999999999998
Q ss_pred CCCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 336 DLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 336 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
.... ....+..... +.... +. ... ...+..++..||+.||.+||++.+++..
T Consensus 246 ~~~~------~~~~~~~~~~-~~~~~-----~~-~~~----~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 246 DGEN------MEEVMHKTLA-GRYDP-----LP-PSI----SPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred CCCC------HHHHHHHHhc-CCCCC-----CC-CCC----CHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 6421 1122222111 11110 11 111 2457889999999999999999999864
No 133
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=6.3e-38 Score=335.95 Aligned_cols=263 Identities=27% Similarity=0.417 Sum_probs=203.0
Q ss_pred hcCCCCCCCeeeccCCeEEEEEEECC-----CCeEEEEEEecccC-hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCE
Q 003278 109 GSNGFDEDEVLGSGGFGKVYRAVLPS-----DGTVVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQ 182 (834)
Q Consensus 109 ~t~~f~~~~~LG~G~fG~Vy~~~~~~-----~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~ 182 (834)
++++|...+.||+|+||.||+|.+.. .+..||+|.+.... ......|.+|+.++++++|+||+++++++.+.+.
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 45779999999999999999999976 67889999886443 3345679999999999999999999999999999
Q ss_pred EEEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCC---ceEE
Q 003278 183 LLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQY---NARL 259 (834)
Q Consensus 183 ~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~---~~kl 259 (834)
.++||||+++|+|.+++............++|..++.++.||+.||+|||+. +++||||||+|||++.++ .+||
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceEe
Confidence 9999999999999999976543222334689999999999999999999985 899999999999998654 5999
Q ss_pred eeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCC
Q 003278 260 GDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLT 338 (834)
Q Consensus 260 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~ 338 (834)
+|||+++.+...... .......+++.|+|||++..+ .++.++|||||||++|||+| |+.||+..
T Consensus 161 ~dfg~~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~~g~~pf~~~ 225 (277)
T cd05036 161 ADFGMARDIYRASYY--------------RKGGRAMLPIKWMPPEAFLDG-IFTSKTDVWSFGVLLWEIFSLGYMPYPGR 225 (277)
T ss_pred ccCccccccCCccce--------------ecCCCCCccHhhCCHHHHhcC-CcCchhHHHHHHHHHHHHHcCCCCCCCCC
Confidence 999999865221100 001122345789999998655 57999999999999999997 98888643
Q ss_pred CCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhh
Q 003278 339 YPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVS 406 (834)
Q Consensus 339 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~ 406 (834)
... .+. ......... . . .... ...+.+++..|++.+|++||++.+|++.|.
T Consensus 226 ~~~---~~~---~~~~~~~~~-~-----~-~~~~----~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 226 TNQ---EVM---EFVTGGGRL-D-----P-PKGC----PGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred CHH---HHH---HHHHcCCcC-C-----C-CCCC----CHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 211 111 111111110 0 0 0111 246788999999999999999999999875
No 134
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=2e-37 Score=329.79 Aligned_cols=260 Identities=22% Similarity=0.347 Sum_probs=205.6
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc---ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK---GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVY 187 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 187 (834)
++|+..+.||+|+||.||+|+...+++.||||.+... .......|.+|+.++++++||||+++++++...+..++||
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 5788999999999999999999889999999987532 2344567899999999999999999999999999999999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhh
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARW 267 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 267 (834)
||+++|+|.+++..... ....+++.....++.|++.||.|||+. +++||||||+|||++.++.++|+|||++..
T Consensus 82 e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~ 155 (267)
T cd08228 82 ELADAGDLSQMIKYFKK---QKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRF 155 (267)
T ss_pred EecCCCcHHHHHHHhhh---ccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECcccccee
Confidence 99999999988854221 124578899999999999999999985 999999999999999999999999999876
Q ss_pred hhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHH
Q 003278 268 LEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347 (834)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~ 347 (834)
+..... ......|++.|+|||.+... ..+.++|||||||++|||+||+.|+..... ...
T Consensus 156 ~~~~~~----------------~~~~~~~~~~~~aPE~~~~~-~~~~~~Di~slG~~l~el~~g~~p~~~~~~----~~~ 214 (267)
T cd08228 156 FSSKTT----------------AAHSLVGTPYYMSPERIHEN-GYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLF 214 (267)
T ss_pred ccchhH----------------HHhcCCCCccccChhhhccC-CCCchhhHHHHHHHHHHHhcCCCCCccccc----cHH
Confidence 532211 01234588999999988654 568899999999999999999999853221 122
Q ss_pred HHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhc
Q 003278 348 DWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSG 407 (834)
Q Consensus 348 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~ 407 (834)
.+...+.. . ..+... .......+.+++..||+.+|++||++.+|++.++.
T Consensus 215 ~~~~~~~~-~-----~~~~~~----~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~ 264 (267)
T cd08228 215 SLCQKIEQ-C-----DYPPLP----TEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQ 264 (267)
T ss_pred HHHHHHhc-C-----CCCCCC----hhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHH
Confidence 22222111 1 111111 11122468899999999999999999999998875
No 135
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=3.7e-37 Score=330.42 Aligned_cols=250 Identities=25% Similarity=0.385 Sum_probs=197.0
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc-ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEcc
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYM 190 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 190 (834)
+|+..++||+|+||.||+|.+..++..||+|.+... .....+.|.+|+.++.+++||||++++++|...+..++||||+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 577788999999999999999889999999998643 2344567899999999999999999999999999999999999
Q ss_pred CCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhh
Q 003278 191 PNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEH 270 (834)
Q Consensus 191 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~ 270 (834)
++|+|..+. .+++.....++.|++.||.|||+. +|+|+||||+|||++.++.+||+|||++..+..
T Consensus 82 ~~~~l~~~~-----------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~ 147 (279)
T cd06619 82 DGGSLDVYR-----------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVN 147 (279)
T ss_pred CCCChHHhh-----------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceeccc
Confidence 999996542 367788899999999999999985 999999999999999999999999999875321
Q ss_pred hhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccc-hHHHH
Q 003278 271 ELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQI-ILLDW 349 (834)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~-~l~~~ 349 (834)
. ..+...||..|+|||++... .++.++|||||||++|||+||+.||......... ....+
T Consensus 148 ~------------------~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~ 208 (279)
T cd06619 148 S------------------IAKTYVGTNAYMAPERISGE-QYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQL 208 (279)
T ss_pred c------------------cccCCCCChhhcCceeecCC-CCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHH
Confidence 1 12335689999999998754 5789999999999999999999998653322211 11111
Q ss_pred HHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 350 IRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 350 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
....... ..+.+..... ...+.+++..|++.+|++||++.++++.
T Consensus 209 ~~~~~~~------~~~~~~~~~~----~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 209 LQCIVDE------DPPVLPVGQF----SEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred HHHHhcc------CCCCCCCCcC----CHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 1111111 1111111111 1357889999999999999999999864
No 136
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.3e-37 Score=342.81 Aligned_cols=251 Identities=19% Similarity=0.197 Sum_probs=196.4
Q ss_pred CcCcCCcccccCCcEEEEEEEC-CCcEEEEEEecCCCC--hhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEe
Q 003278 514 NFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSKC--PALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYD 590 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~--~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~E 590 (834)
+|...+.||+|+||.||+|... +++.||||++..... ......+.+|+.++.+++||||+++++++.+.+..++|||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 81 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME 81 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence 5677788999999999999975 478999999864321 2234578899999999999999999999999999999999
Q ss_pred ccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccc
Q 003278 591 YSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLT 670 (834)
Q Consensus 591 y~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~ 670 (834)
|+++|+|.+++.... .+++.....++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 82 ~~~g~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~ 152 (333)
T cd05600 82 YVPGGDFRTLLNNLG------VLSEDHARFYMAEMFEAVDALHE---LGYIHRDLKPENFLIDASGHIKLTDFGLSKGIV 152 (333)
T ss_pred CCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEEEeCcCCcccc
Confidence 999999999986432 37788888999999999999996 689999999999999999999999999997542
Q ss_pred cCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhh-cCcc
Q 003278 671 RNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEAR-KRPL 749 (834)
Q Consensus 671 ~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~-~~~~ 749 (834)
. ......||+.|+|||++.+..++.++|||||||++|||+||..||....+... ...+..+... ..+
T Consensus 153 ~----------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~-~~~i~~~~~~~~~~- 220 (333)
T cd05600 153 T----------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNET-WENLKYWKETLQRP- 220 (333)
T ss_pred c----------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHH-HHHHHhccccccCC-
Confidence 2 12345799999999999999999999999999999999999999875443322 1111111000 000
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 750 AELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 750 ~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
...++. ... .. .+..++.+||..+|++|||+.+|++
T Consensus 221 -~~~~~~--~~~-s~---~~~~li~~~l~~~~~rr~s~~~ll~ 256 (333)
T cd05600 221 -VYDDPR--FNL-SD---EAWDLITKLINDPSRRFGSLEDIKN 256 (333)
T ss_pred -CCCccc--ccc-CH---HHHHHHHHHhhChhhhcCCHHHHHh
Confidence 000000 011 22 3445556899999999999999985
No 137
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.3e-37 Score=334.41 Aligned_cols=260 Identities=23% Similarity=0.344 Sum_probs=199.3
Q ss_pred CcCcCCcccccCCcEEEEEEE-----CCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEE
Q 003278 514 NFSESQRVAEMDFGTAYQGFL-----DNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVI 588 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~-----~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv 588 (834)
+|.-.+.||+|+||.||+|.. ..+..|++|.+...........|.+|+.++++++||||+++++++......++|
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 85 (283)
T cd05090 6 AVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCML 85 (283)
T ss_pred hceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEE
Confidence 455667899999999999984 345789999987555445556799999999999999999999999999999999
Q ss_pred EeccCCCchhhhhhcCCCC-----------CCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCC
Q 003278 589 YDYSATRILSHLLFHNNHR-----------IGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMN 657 (834)
Q Consensus 589 ~Ey~~~g~L~~~l~~~~~~-----------~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~ 657 (834)
|||+++++|.+++...... .....+++...+.++.|++.||+|||+ .+|+||||||+|||+++++.
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~nili~~~~~ 162 (283)
T cd05090 86 FEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSS---HFFVHKDLAARNILIGEQLH 162 (283)
T ss_pred EEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---cCeehhccccceEEEcCCCc
Confidence 9999999999998533210 011247888999999999999999996 68999999999999999999
Q ss_pred ceEeeeeeccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHH
Q 003278 658 PRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLV 736 (834)
Q Consensus 658 ~ki~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~ 736 (834)
+|++|||+++........ .......++..|+|||++.++.++.++|||||||++|||+| |..|+....+ ....
T Consensus 163 ~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~-~~~~ 236 (283)
T cd05090 163 VKISDLGLSREIYSADYY-----RVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN-QEVI 236 (283)
T ss_pred EEeccccccccccCCcce-----ecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH-HHHH
Confidence 999999999765332211 11223456788999999988899999999999999999999 8888754322 1111
Q ss_pred HHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHcc
Q 003278 737 KRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDG 796 (834)
Q Consensus 737 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~ 796 (834)
..+. . .... ......+ . .+..++.+||+.||++||++.+|.+.|.+
T Consensus 237 ~~~~----~-~~~~-----~~~~~~~-~---~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 237 EMVR----K-RQLL-----PCSEDCP-P---RMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHH----c-CCcC-----CCCCCCC-H---HHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 1111 1 1110 0111122 2 34556669999999999999999998864
No 138
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1.8e-37 Score=334.41 Aligned_cols=264 Identities=28% Similarity=0.459 Sum_probs=206.0
Q ss_pred cCCCCCCCeeeccCCeEEEEEEE-----CCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEE
Q 003278 110 SNGFDEDEVLGSGGFGKVYRAVL-----PSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLL 184 (834)
Q Consensus 110 t~~f~~~~~LG~G~fG~Vy~~~~-----~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~ 184 (834)
.++|...+.||+|+||.||++.. ..++..+|+|.+........+.+.+|+.++.+++||||++++++|...+..+
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 83 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 46788899999999999999985 2345679999987766666778999999999999999999999999999999
Q ss_pred EEEEccCCCCHhHHHhcCCCc------cccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceE
Q 003278 185 LVYDYMPNRSLDRVLFRRPEN------LEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNAR 258 (834)
Q Consensus 185 lV~Ey~~~gsL~~~l~~~~~~------~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~k 258 (834)
+||||+++|+|.+++...... ......++|..++.++.|++.||+|||+. +++||||||+|||+++++.+|
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVK 160 (288)
T ss_pred EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCcEE
Confidence 999999999999998653210 01224589999999999999999999985 999999999999999999999
Q ss_pred EeeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCC
Q 003278 259 LGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDL 337 (834)
Q Consensus 259 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~ 337 (834)
|+|||+++.+...... .......|++.|+|||.+... .++.++|||||||++|||+| |+.|+..
T Consensus 161 l~dfg~~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~~-~~~~~sDiwslG~il~~l~t~g~~p~~~ 225 (288)
T cd05093 161 IGDFGMSRDVYSTDYY--------------RVGGHTMLPIRWMPPESIMYR-KFTTESDVWSLGVVLWEIFTYGKQPWYQ 225 (288)
T ss_pred eccCCccccccCCcee--------------ecCCCCCccccccCHHHhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999754321100 011223467899999988644 67899999999999999999 8888754
Q ss_pred CCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcC
Q 003278 338 TYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGS 408 (834)
Q Consensus 338 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~ 408 (834)
.... .... . ...+..... . ... ...+.+++..||+.||.+||++.+|.+.|+..
T Consensus 226 ~~~~---~~~~---~-i~~~~~~~~-----~-~~~----~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~ 279 (288)
T cd05093 226 LSNN---EVIE---C-ITQGRVLQR-----P-RTC----PKEVYDLMLGCWQREPHMRLNIKEIHSLLQNL 279 (288)
T ss_pred CCHH---HHHH---H-HHcCCcCCC-----C-CCC----CHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence 3221 1111 1 112221111 0 111 13588999999999999999999999988764
No 139
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2.6e-37 Score=344.87 Aligned_cols=259 Identities=22% Similarity=0.267 Sum_probs=196.7
Q ss_pred HHhhcCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc---ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCE
Q 003278 106 LYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK---GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQ 182 (834)
Q Consensus 106 l~~~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~ 182 (834)
+....++|+..+.||+|+||.||++....+++.||+|.+.+. .....+.+.+|+.+++.++||||+++++++.+++.
T Consensus 38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (370)
T cd05621 38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKY 117 (370)
T ss_pred cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence 344567899999999999999999999889999999998642 12234567889999999999999999999999999
Q ss_pred EEEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeec
Q 003278 183 LLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDF 262 (834)
Q Consensus 183 ~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 262 (834)
.++||||+++|+|.+++... .+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+||
T Consensus 118 ~~lv~Ey~~gg~L~~~l~~~--------~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DF 186 (370)
T cd05621 118 LYMVMEYMPGGDLVNLMSNY--------DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADF 186 (370)
T ss_pred EEEEEcCCCCCcHHHHHHhc--------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEec
Confidence 99999999999999988532 467888999999999999999985 9999999999999999999999999
Q ss_pred cchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccC---CCCCcccceeehhhHHHHHHhCCccCCCCC
Q 003278 263 GLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKG---SVATAKSDVFSFGIVVLEVVSGRRAVDLTY 339 (834)
Q Consensus 263 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~---~~~~~ksDV~SfGvvl~ElltG~~p~~~~~ 339 (834)
|+++.+.... .....+..||+.|||||.+... ..++.++|||||||++|||+||+.||....
T Consensus 187 G~a~~~~~~~---------------~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~ 251 (370)
T cd05621 187 GTCMKMDETG---------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS 251 (370)
T ss_pred ccceecccCC---------------ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCC
Confidence 9997542210 0012345699999999998642 236789999999999999999999996432
Q ss_pred CCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCC--CCCchhhHHHH
Q 003278 340 PDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPH--LRPSMKWVIEA 404 (834)
Q Consensus 340 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~--~RPsm~~V~~~ 404 (834)
. .................+ . ..-...+..+...|+..+|. .||++.++++.
T Consensus 252 ~------~~~~~~i~~~~~~~~~p~-----~---~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 252 L------VGTYSKIMDHKNSLNFPE-----D---VEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred H------HHHHHHHHhCCcccCCCC-----c---ccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 1 111122211111111110 0 00113456677778875443 38888888763
No 140
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=1.7e-37 Score=333.01 Aligned_cols=257 Identities=24% Similarity=0.366 Sum_probs=197.9
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCe----EEEEEEecccC-hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGT----VVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLL 185 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~----~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 185 (834)
++|+..+.||+|+||.||+|.+..+|. .||+|.+.... .....++..|+..+++++||||++++|++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence 357778999999999999999877776 47777775432 2344678889999999999999999998864 55789
Q ss_pred EEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccch
Q 003278 186 VYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLA 265 (834)
Q Consensus 186 V~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 265 (834)
++||+++|+|.+++.... ..++|..+..|+.|++.||+|||+. +++||||||+|||++.++.+||+|||++
T Consensus 86 i~e~~~~gsL~~~l~~~~------~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~ 156 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHR------DSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVA 156 (279)
T ss_pred EEEeCCCCcHHHHHHhcc------cCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccc
Confidence 999999999999996532 3589999999999999999999985 8999999999999999999999999999
Q ss_pred hhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCccc
Q 003278 266 RWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQI 344 (834)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~ 344 (834)
+.+..... ....+...|+..|+|||++..+ .++.++|||||||++|||+| |+.|+......
T Consensus 157 ~~~~~~~~--------------~~~~~~~~~~~~y~~pE~~~~~-~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--- 218 (279)
T cd05111 157 DLLYPDDK--------------KYFYSEHKTPIKWMALESILFG-RYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH--- 218 (279)
T ss_pred eeccCCCc--------------ccccCCCCCcccccCHHHhccC-CcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH---
Confidence 86432110 0012334578899999998655 57999999999999999998 99888643211
Q ss_pred hHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcCC
Q 003278 345 ILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGSY 409 (834)
Q Consensus 345 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~~ 409 (834)
.+.++ ...+.... .+. .. ...+..++..||..||..||++.++++.|....
T Consensus 219 ~~~~~----~~~~~~~~--~~~----~~----~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~ 269 (279)
T cd05111 219 EVPDL----LEKGERLA--QPQ----IC----TIDVYMVMVKCWMIDENVRPTFKELANEFTRMA 269 (279)
T ss_pred HHHHH----HHCCCcCC--CCC----CC----CHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 11121 22222111 111 11 134677889999999999999999999887643
No 141
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.1e-37 Score=329.79 Aligned_cols=256 Identities=22% Similarity=0.333 Sum_probs=200.3
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEcc
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYM 190 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 190 (834)
++|+..+.||+|+||.||+|....+|+.||+|++..........+.+|+.++.+++||||+++++++...+..++||||+
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~ 88 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC 88 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence 46888999999999999999998899999999987554444566889999999999999999999999999999999999
Q ss_pred CCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhh
Q 003278 191 PNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEH 270 (834)
Q Consensus 191 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~ 270 (834)
++|+|.+++... .++++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++.+..
T Consensus 89 ~~~~L~~~~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06646 89 GGGSLQDIYHVT-------GPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITA 158 (267)
T ss_pred CCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeecc
Confidence 999999988542 3578999999999999999999985 999999999999999999999999999975421
Q ss_pred hhhhhhhcccccccccccccceeeeccccCCCcccccc--CCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHH
Q 003278 271 ELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQK--GSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLD 348 (834)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~--~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~ 348 (834)
.. .......|++.|+|||.+.. ...++.++|||||||++|||+||+.|+....+..... .
T Consensus 159 ~~----------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~--~ 220 (267)
T cd06646 159 TI----------------AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF--L 220 (267)
T ss_pred cc----------------cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe--e
Confidence 10 01223458999999998742 3346789999999999999999999985332111100 0
Q ss_pred HHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHh
Q 003278 349 WIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAV 405 (834)
Q Consensus 349 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l 405 (834)
+ ..... ..+... . ...-...+.+++..||+.+|++||++.++++.+
T Consensus 221 ----~-~~~~~---~~~~~~-~--~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 221 ----M-SKSNF---QPPKLK-D--KTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred ----e-ecCCC---CCCCCc-c--ccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 0 00000 001110 0 001124678999999999999999999998753
No 142
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=8.2e-38 Score=332.32 Aligned_cols=256 Identities=24% Similarity=0.355 Sum_probs=202.1
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEcc
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYM 190 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 190 (834)
.+|+..+.||+|+||.||+|.+..+++.||+|.+... ....+.+.+|+.++.+++||||++++++|...+..++||||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 4577889999999999999999888999999998654 334567899999999999999999999999999999999999
Q ss_pred CCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhh
Q 003278 191 PNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEH 270 (834)
Q Consensus 191 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~ 270 (834)
++|+|.+++.... ...++|..++.++.|+++||+|||+. +++||||||+|||+++++.+||+|||+++....
T Consensus 85 ~~~~L~~~~~~~~-----~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~ 156 (263)
T cd05052 85 TYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 156 (263)
T ss_pred CCCcHHHHHHhCC-----CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCcccccccc
Confidence 9999999986532 24589999999999999999999985 999999999999999999999999999975432
Q ss_pred hhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCccchHHHH
Q 003278 271 ELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQIILLDW 349 (834)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~~l~~~ 349 (834)
... .......+++.|+|||++... .++.++|||||||++|||+| |..|+..... ..+
T Consensus 157 ~~~---------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~t~g~~p~~~~~~------~~~ 214 (263)
T cd05052 157 DTY---------------TAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDL------SQV 214 (263)
T ss_pred cee---------------eccCCCCCccccCCHHHhccC-CCCchhHHHHHHHHHHHHHcCCCCCCCCCCH------HHH
Confidence 110 001122346789999988644 67889999999999999998 8888754221 111
Q ss_pred HHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcC
Q 003278 350 IRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGS 408 (834)
Q Consensus 350 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~ 408 (834)
.... ..+... ... .. ....+.+++.+||+.+|++||+|.++++.|+..
T Consensus 215 ~~~~-~~~~~~-----~~~-~~----~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 215 YELL-EKGYRM-----ERP-EG----CPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred HHHH-HCCCCC-----CCC-CC----CCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 1111 111100 000 11 124688899999999999999999999998753
No 143
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=4.5e-37 Score=332.58 Aligned_cols=267 Identities=19% Similarity=0.280 Sum_probs=199.1
Q ss_pred hCcCcCCcccccCCcEEEEEEECC---------------CcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLDN---------------HQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCG 577 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~~---------------~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g 577 (834)
+.|...++||+|+||.||++...+ ...||||.+...........|.+|++++++++||||+++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 356667889999999999987542 13589999876555556678999999999999999999999
Q ss_pred EEeeCCeEEEEEeccCCCchhhhhhcCCCC------CCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCcee
Q 003278 578 WCTEQGEMLVIYDYSATRILSHLLFHNNHR------IGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAIT 651 (834)
Q Consensus 578 ~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~------~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NIL 651 (834)
++...+..++||||+++++|.+++...... .....++|..++.++.|++.||+|||+ .+++||||||+|||
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Nil 161 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLAS---LNFVHRDLATRNCL 161 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHh---cCeeccccChhhEE
Confidence 999999999999999999999988643211 111247889999999999999999996 68999999999999
Q ss_pred ecCCCCceEeeeeeccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh--CCCccCCC
Q 003278 652 LDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT--GQMAVDFR 729 (834)
Q Consensus 652 ld~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t--G~~p~~~~ 729 (834)
+++++.+||+|||++..+..... ........++..|+|||++.++.++.++|||||||++|||+| |..|+...
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~ 236 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGDY-----YRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLL 236 (295)
T ss_pred EcCCCcEEecccccccccccCcc-----eeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCccc
Confidence 99999999999999976432211 011122345778999999998999999999999999999998 45565433
Q ss_pred CCchhHHHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHc
Q 003278 730 LPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795 (834)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~ 795 (834)
.. ................ ... ....... + ..+.+++.+||+.||++||||.+|++.|.
T Consensus 237 ~~-~~~~~~~~~~~~~~~~--~~~-~~~~~~~-~---~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 237 SD-EQVIENTGEFFRNQGR--QIY-LSQTPLC-P---SPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred Ch-HHHHHHHHHhhhhccc--ccc-CCCCCCC-C---HHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 22 2222222111110000 000 0001111 1 25667778999999999999999999885
No 144
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=3.2e-37 Score=338.23 Aligned_cols=242 Identities=26% Similarity=0.338 Sum_probs=189.6
Q ss_pred CeeeccCCeEEEEEEEC---CCCeEEEEEEeccc----ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEc
Q 003278 117 EVLGSGGFGKVYRAVLP---SDGTVVAVKCLAEK----GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDY 189 (834)
Q Consensus 117 ~~LG~G~fG~Vy~~~~~---~~g~~vAvK~l~~~----~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 189 (834)
+.||+|+||.||++... .+++.||||++... .......+.+|+.+|+.++||||++++++|..++..|+||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 57999999999999863 46889999998643 122345678899999999999999999999999999999999
Q ss_pred cCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhh
Q 003278 190 MPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLE 269 (834)
Q Consensus 190 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~ 269 (834)
+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 82 ~~~~~L~~~~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 151 (323)
T cd05584 82 LSGGELFMHLERE-------GIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESI 151 (323)
T ss_pred CCCchHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecc
Confidence 9999999988643 3577888899999999999999985 99999999999999999999999999987421
Q ss_pred hhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHH
Q 003278 270 HELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDW 349 (834)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~ 349 (834)
... .......||+.|+|||.+... .++.++|||||||++|||+||+.||...... ..
T Consensus 152 ~~~----------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~G~~pf~~~~~~------~~ 208 (323)
T cd05584 152 HEG----------------TVTHTFCGTIEYMAPEILMRS-GHGKAVDWWSLGALMYDMLTGAPPFTAENRK------KT 208 (323)
T ss_pred cCC----------------CcccccCCCccccChhhccCC-CCCCcceecccHHHHHHHhcCCCCCCCCCHH------HH
Confidence 110 012345699999999998654 5688999999999999999999998643211 11
Q ss_pred HHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCC-----chhhHHH
Q 003278 350 IRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRP-----SMKWVIE 403 (834)
Q Consensus 350 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RP-----sm~~V~~ 403 (834)
...+.. +.. .+.+ .. ...+.+++..||+.+|++|| ++.++++
T Consensus 209 ~~~~~~-~~~--~~~~-----~~----~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 209 IDKILK-GKL--NLPP-----YL----TPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred HHHHHc-CCC--CCCC-----CC----CHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 112111 111 0111 11 13577899999999999999 6666654
No 145
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.5e-37 Score=327.97 Aligned_cols=249 Identities=20% Similarity=0.314 Sum_probs=193.3
Q ss_pred CcccccCCcEEEEEEE-CCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEeccCCCch
Q 003278 519 QRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRIL 597 (834)
Q Consensus 519 ~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~~g~L 597 (834)
+.||+|+||.||+|.. .+++.||+|.+...........|.+|++++++++||||++++++|......++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 3689999999999986 468889999876555555667899999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCCCCc
Q 003278 598 SHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHR 677 (834)
Q Consensus 598 ~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~~~~ 677 (834)
.+++.... ..++|..+..++.|++.||+|||+ .+|+||||||+|||++.++.+|++|||++........
T Consensus 81 ~~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~--- 149 (252)
T cd05084 81 LTFLRTEG-----PRLKVKELIQMVENAAAGMEYLES---KHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVY--- 149 (252)
T ss_pred HHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEEcCCCcEEECccccCcccccccc---
Confidence 99986432 247899999999999999999996 6899999999999999999999999999875432110
Q ss_pred ccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcCccccccccc
Q 003278 678 KATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLS 756 (834)
Q Consensus 678 ~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 756 (834)
........++..|+|||++.++.++.++|||||||++|||++ |..|+....+.. ..... ... .. ..
T Consensus 150 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~-~~~~~---~~~-~~------~~ 216 (252)
T cd05084 150 --ASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ-TREAI---EQG-VR------LP 216 (252)
T ss_pred --cccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH-HHHHH---HcC-CC------CC
Confidence 000011123467999999999999999999999999999998 777775433221 11111 000 00 00
Q ss_pred cCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHc
Q 003278 757 LNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795 (834)
Q Consensus 757 l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~ 795 (834)
..... + ..+.+++.+||+.+|++|||+.+|.++|+
T Consensus 217 ~~~~~-~---~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 217 CPELC-P---DAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CcccC-C---HHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 11111 2 24556667999999999999999999885
No 146
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=2.1e-37 Score=341.51 Aligned_cols=264 Identities=28% Similarity=0.417 Sum_probs=201.0
Q ss_pred CCCCCCCeeeccCCeEEEEEEECC-----CCeEEEEEEecccC-hhhHHHHHHHHHHHHhC-CCCceeeEeeeEEeC-CE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPS-----DGTVVAVKCLAEKG-ERFEKTFAAELVAVAHL-RHRNLVRLRGWCVHE-DQ 182 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~-----~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~-~~ 182 (834)
++|+..+.||+|+||.||+|.... +++.||+|++.... ....+.+..|+.++.++ +|+||++++++|... +.
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~ 86 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP 86 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence 468889999999999999997533 35789999986532 23346688899999999 899999999988754 56
Q ss_pred EEEEEEccCCCCHhHHHhcCCCcc------------------------------------------------------cc
Q 003278 183 LLLVYDYMPNRSLDRVLFRRPENL------------------------------------------------------EA 208 (834)
Q Consensus 183 ~~lV~Ey~~~gsL~~~l~~~~~~~------------------------------------------------------~~ 208 (834)
+++||||+++|+|.+++....... ..
T Consensus 87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (337)
T cd05054 87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY 166 (337)
T ss_pred EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence 899999999999999986432100 00
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhhhhhhhccccccccccc
Q 003278 209 AAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHL 288 (834)
Q Consensus 209 ~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~ 288 (834)
..+++|..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+......
T Consensus 167 ~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~-------------- 229 (337)
T cd05054 167 KEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY-------------- 229 (337)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcch--------------
Confidence 13689999999999999999999985 9999999999999999999999999999865322110
Q ss_pred ccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCccchHHHHHHHHhhcCcccccccccc
Q 003278 289 AETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQIILLDWIRRLSDEGKVLQAGDNRL 367 (834)
Q Consensus 289 ~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 367 (834)
.......|+..|+|||++... .++.++|||||||++|||+| |+.||......+. + ......+.....
T Consensus 230 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~--~----~~~~~~~~~~~~----- 297 (337)
T cd05054 230 VRKGDARLPLKWMAPESIFDK-VYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE--F----CRRLKEGTRMRA----- 297 (337)
T ss_pred hhccCCCCCccccCcHHhcCC-CCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH--H----HHHHhccCCCCC-----
Confidence 012234567889999988654 67999999999999999998 9988865332211 1 111122211110
Q ss_pred CCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcC
Q 003278 368 SDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGS 408 (834)
Q Consensus 368 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~ 408 (834)
. . .....+.+++..||+.+|++||++.+|++.|...
T Consensus 298 ~-~----~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~ 333 (337)
T cd05054 298 P-E----YATPEIYSIMLDCWHNNPEDRPTFSELVEILGDL 333 (337)
T ss_pred C-c----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 0 0 1124578999999999999999999999998764
No 147
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.4e-37 Score=332.97 Aligned_cols=241 Identities=22% Similarity=0.365 Sum_probs=188.0
Q ss_pred eeeccCCeEEEEEEECCC------------------------CeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeE
Q 003278 118 VLGSGGFGKVYRAVLPSD------------------------GTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRL 173 (834)
Q Consensus 118 ~LG~G~fG~Vy~~~~~~~------------------------g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l 173 (834)
.||+|+||.||+|.+..+ ...||+|.+..........|.+|+.++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 699999999999986321 24689999876555556778899999999999999999
Q ss_pred eeeEEeCCEEEEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECC
Q 003278 174 RGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDS 253 (834)
Q Consensus 174 ~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~ 253 (834)
+|+|.+.+..++||||+++|+|..++... ...+++..++.++.|+++||+|||+. +|+||||||+|||++.
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~------~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~ 152 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKE------KGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLAR 152 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEec
Confidence 99999999999999999999999988642 24578999999999999999999985 9999999999999976
Q ss_pred CC-------ceEEeeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHH
Q 003278 254 QY-------NARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVL 326 (834)
Q Consensus 254 ~~-------~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ 326 (834)
.+ .+|++|||++..... .....|+..|+|||.+.....++.++|||||||++|
T Consensus 153 ~~~~~~~~~~~kl~d~g~~~~~~~--------------------~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~ 212 (274)
T cd05076 153 LGLAEGTSPFIKLSDPGVSFTALS--------------------REERVERIPWIAPECVPGGNSLSTAADKWSFGTTLL 212 (274)
T ss_pred cCcccCccceeeecCCcccccccc--------------------ccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHH
Confidence 43 379999998763211 112247888999998876556799999999999999
Q ss_pred HHH-hCCccCCCCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHh
Q 003278 327 EVV-SGRRAVDLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAV 405 (834)
Q Consensus 327 Ell-tG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l 405 (834)
||+ +|+.|+....+.. ...+. .... .+. ... ...+.+++..||+.+|++||+|.+|++.|
T Consensus 213 el~~~g~~p~~~~~~~~---~~~~~----~~~~-------~~~-~~~----~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 213 EICFDGEVPLKERTPSE---KERFY----EKKH-------RLP-EPS----CKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred HHHhCCCCCccccChHH---HHHHH----Hhcc-------CCC-CCC----ChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 995 7888886432221 11111 1100 111 001 13578899999999999999999999876
Q ss_pred h
Q 003278 406 S 406 (834)
Q Consensus 406 ~ 406 (834)
+
T Consensus 274 ~ 274 (274)
T cd05076 274 T 274 (274)
T ss_pred C
Confidence 3
No 148
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.8e-37 Score=342.18 Aligned_cols=264 Identities=23% Similarity=0.308 Sum_probs=193.8
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc--ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCC-----EEE
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK--GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHED-----QLL 184 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~-----~~~ 184 (834)
.|+..+.||+|+||.||+|+...+|..||||++... .......+.+|+.++++++||||+++++++...+ ..|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 367788999999999999999889999999998643 2233456889999999999999999999986543 489
Q ss_pred EEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccc
Q 003278 185 LVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGL 264 (834)
Q Consensus 185 lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 264 (834)
+||||++ ++|.+++... ..+++..+..++.|+++||.|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 81 lv~e~~~-~~L~~~l~~~-------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~ 149 (338)
T cd07859 81 VVFELME-SDLHQVIKAN-------DDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGL 149 (338)
T ss_pred EEEecCC-CCHHHHHHhc-------ccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCcc
Confidence 9999995 6898887542 3589999999999999999999986 999999999999999999999999999
Q ss_pred hhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccC-CCCCcccceeehhhHHHHHHhCCccCCCCCCCcc
Q 003278 265 ARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKG-SVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQ 343 (834)
Q Consensus 265 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~-~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~ 343 (834)
++........ ....+...||+.|+|||++... ..++.++|||||||++|||+||+.||.......
T Consensus 150 ~~~~~~~~~~-------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~- 215 (338)
T cd07859 150 ARVAFNDTPT-------------AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVH- 215 (338)
T ss_pred ccccccccCc-------------cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHH-
Confidence 9754221100 0012345699999999987542 367889999999999999999999986432111
Q ss_pred chHHHHHHHHhhc-----------C---ccccccccccC---CCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHH
Q 003278 344 IILLDWIRRLSDE-----------G---KVLQAGDNRLS---DGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIE 403 (834)
Q Consensus 344 ~~l~~~~~~~~~~-----------~---~~~~~~d~~l~---~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~ 403 (834)
....+...... . ........... ...+. .....+.+++..||+.||++||++.++++
T Consensus 216 --~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 216 --QLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFP-NADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred --HHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcC-CCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 11111110000 0 00000000000 00000 01134678999999999999999999986
No 149
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=2.2e-37 Score=328.15 Aligned_cols=250 Identities=17% Similarity=0.291 Sum_probs=192.0
Q ss_pred cccccCCcEEEEEEEC---CCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEeccCCCc
Q 003278 520 RVAEMDFGTAYQGFLD---NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRI 596 (834)
Q Consensus 520 ~ig~g~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~~g~ 596 (834)
.||+|+||.||+|.+. ++..||||.+.........+.|.+|+.++++++||||++++|+|.. +..++||||+++|+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCC
Confidence 3899999999999763 3557999998765555556789999999999999999999998854 56899999999999
Q ss_pred hhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCCCC
Q 003278 597 LSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGH 676 (834)
Q Consensus 597 L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~~~ 676 (834)
|.+++.... ..+++..+++++.|++.||+|||+ .+++||||||+|||++.++.+|++|||++..........
T Consensus 81 L~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 152 (257)
T cd05115 81 LNKFLSGKK-----DEITVSNVVELMHQVSMGMKYLEG---KNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYY 152 (257)
T ss_pred HHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHh---cCeeecccchheEEEcCCCcEEeccCCccccccCCccce
Confidence 999886432 247899999999999999999996 689999999999999999999999999997653322111
Q ss_pred cccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcCcccccccc
Q 003278 677 RKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDL 755 (834)
Q Consensus 677 ~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 755 (834)
. ......++..|+|||++....++.++|||||||++|||++ |..|+....+.. ....+ .....+
T Consensus 153 ~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~~~~~---~~~~~~------- 217 (257)
T cd05115 153 K----ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE-VMSFI---EQGKRL------- 217 (257)
T ss_pred e----ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH-HHHHH---HCCCCC-------
Confidence 0 0111234678999999988889999999999999999997 998886443322 11111 111110
Q ss_pred ccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccC
Q 003278 756 SLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGN 797 (834)
Q Consensus 756 ~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~ 797 (834)
... .....+ +.+++.+||..+|++||+|.+|.+.|+.+
T Consensus 218 ~~~-~~~~~~---l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 218 DCP-AECPPE---MYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCC-CCCCHH---HHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 011 112233 44566699999999999999999998653
No 150
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=2.9e-37 Score=346.03 Aligned_cols=268 Identities=20% Similarity=0.261 Sum_probs=194.6
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc---ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK---GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVY 187 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 187 (834)
++|+..+.||+|+||.||++....+|+.||||++... .....+.+.+|+.++.+++|||||++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 4688889999999999999999999999999998543 1233466888999999999999999999999999999999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhh
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARW 267 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 267 (834)
||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 81 E~~~gg~L~~~l~~~-------~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~ 150 (377)
T cd05629 81 EFLPGGDLMTMLIKY-------DTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTG 150 (377)
T ss_pred eCCCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeecccccc
Confidence 999999999998642 3578889999999999999999985 999999999999999999999999999964
Q ss_pred hhhhhhhh--hh--cc-ccccc-----c---------------------cccccceeeeccccCCCccccccCCCCCccc
Q 003278 268 LEHELQYQ--MR--TS-SARNH-----Q---------------------FHLAETTRIGGTIGYLPPESFQKGSVATAKS 316 (834)
Q Consensus 268 ~~~~~~~~--~~--~~-~~~~~-----~---------------------~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ks 316 (834)
+....... .. .. ..... . .........+||+.|+|||++... .++.++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~ 229 (377)
T cd05629 151 FHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQ-GYGQEC 229 (377)
T ss_pred cccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccC-CCCCce
Confidence 32110000 00 00 00000 0 000001135699999999998654 679999
Q ss_pred ceeehhhHHHHHHhCCccCCCCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCC-
Q 003278 317 DVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLR- 395 (834)
Q Consensus 317 DV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~R- 395 (834)
|||||||++|||+||+.||......+ . ..............+. .... ..+.+++..|+. +|.+|
T Consensus 230 DiwSlGvil~elltG~~Pf~~~~~~~---~---~~~i~~~~~~~~~p~~----~~~s----~~~~dli~~lL~-~~~~r~ 294 (377)
T cd05629 230 DWWSLGAIMFECLIGWPPFCSENSHE---T---YRKIINWRETLYFPDD----IHLS----VEAEDLIRRLIT-NAENRL 294 (377)
T ss_pred eeEecchhhhhhhcCCCCCCCCCHHH---H---HHHHHccCCccCCCCC----CCCC----HHHHHHHHHHhc-CHhhcC
Confidence 99999999999999999986432211 1 1111111111111110 0111 245677778887 66665
Q ss_pred --CchhhHHHH
Q 003278 396 --PSMKWVIEA 404 (834)
Q Consensus 396 --Psm~~V~~~ 404 (834)
|++.+++..
T Consensus 295 ~r~~~~~~l~h 305 (377)
T cd05629 295 GRGGAHEIKSH 305 (377)
T ss_pred CCCCHHHHhcC
Confidence 588887764
No 151
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=3.2e-37 Score=333.74 Aligned_cols=268 Identities=23% Similarity=0.352 Sum_probs=199.1
Q ss_pred cCCCCCCCeeeccCCeEEEEEEECCC--------------CeEEEEEEeccc-ChhhHHHHHHHHHHHHhCCCCceeeEe
Q 003278 110 SNGFDEDEVLGSGGFGKVYRAVLPSD--------------GTVVAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVRLR 174 (834)
Q Consensus 110 t~~f~~~~~LG~G~fG~Vy~~~~~~~--------------g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~ 174 (834)
.++|+..+.||+|+||.||+|+.... ...||||.+... .......|.+|+.++++++||||++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 35688899999999999999987432 235999998654 333456799999999999999999999
Q ss_pred eeEEeCCEEEEEEEccCCCCHhHHHhcCCCc-----cccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCce
Q 003278 175 GWCVHEDQLLLVYDYMPNRSLDRVLFRRPEN-----LEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNV 249 (834)
Q Consensus 175 g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~-----~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NI 249 (834)
+++...+..++||||+++++|.+++...... ......++|..++.++.|++.||+|||+. +++||||||+||
T Consensus 84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Ni 160 (295)
T cd05097 84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRNC 160 (295)
T ss_pred EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhhE
Confidence 9999999999999999999999998653210 01123478999999999999999999985 999999999999
Q ss_pred EECCCCceEEeeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHH
Q 003278 250 MLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVV 329 (834)
Q Consensus 250 Lld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ell 329 (834)
|+++++.+||+|||+++.+..... ........+++.|+|||++..+ .++.++|||||||++|||+
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~~--------------~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwSlG~~l~el~ 225 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGDY--------------YRIQGRAVLPIRWMAWESILLG-KFTTASDVWAFGVTLWEMF 225 (295)
T ss_pred EEcCCCcEEecccccccccccCcc--------------eeccCcCcCceeecChhhhccC-CcCchhhHHHHHHHHHHHH
Confidence 999999999999999875422100 0011233467899999988655 5799999999999999999
Q ss_pred hC--CccCCCCCCCccchHHHHHHHHhh-cCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhh
Q 003278 330 SG--RRAVDLTYPDDQIILLDWIRRLSD-EGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVS 406 (834)
Q Consensus 330 tG--~~p~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~ 406 (834)
|+ ..|+..... .. ....+..... .+.......+. . ....+.+++..||+.+|++||+|.+|++.|.
T Consensus 226 ~~~~~~p~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~----~----~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 226 TLCKEQPYSLLSD--EQ-VIENTGEFFRNQGRQIYLSQTP----L----CPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HcCCCCCCcccCh--HH-HHHHHHHhhhhccccccCCCCC----C----CCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 84 445543221 11 1111111111 11111111111 1 1246899999999999999999999999875
No 152
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=2e-37 Score=334.45 Aligned_cols=260 Identities=20% Similarity=0.294 Sum_probs=199.7
Q ss_pred cCcCCcccccCCcEEEEEEEC------CCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEE
Q 003278 515 FSESQRVAEMDFGTAYQGFLD------NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVI 588 (834)
Q Consensus 515 f~~~~~ig~g~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv 588 (834)
|...+.||+|+||.||+|... ....+++|.+...........|.+|+.+++.++|||||+++++|...+..+++
T Consensus 2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (290)
T cd05045 2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLI 81 (290)
T ss_pred ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEE
Confidence 556678999999999999853 23568899887555444456799999999999999999999999999999999
Q ss_pred EeccCCCchhhhhhcCCCC------------------CCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCce
Q 003278 589 YDYSATRILSHLLFHNNHR------------------IGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAI 650 (834)
Q Consensus 589 ~Ey~~~g~L~~~l~~~~~~------------------~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NI 650 (834)
+||+.+|+|.+++...... .....++|...+.++.|++.||.|||+ .+|+||||||+||
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~ivH~dikp~ni 158 (290)
T cd05045 82 VEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAE---MKLVHRDLAARNV 158 (290)
T ss_pred EEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHH---CCeehhhhhhheE
Confidence 9999999999988643210 112358899999999999999999996 6999999999999
Q ss_pred eecCCCCceEeeeeeccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCC
Q 003278 651 TLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFR 729 (834)
Q Consensus 651 Lld~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~ 729 (834)
|+++++.+||+|||+++........ .......++..|+|||++.+..++.++|||||||++|||+| |..|+...
T Consensus 159 ll~~~~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~ 233 (290)
T cd05045 159 LVAEGRKMKISDFGLSRDVYEEDSY-----VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 233 (290)
T ss_pred EEcCCCcEEeccccccccccCccch-----hcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCC
Confidence 9999999999999999764322110 01122356778999999988889999999999999999999 88888644
Q ss_pred CCchhHHHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccC
Q 003278 730 LPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGN 797 (834)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~ 797 (834)
.+.. +.... . ... ........ . ..+.+++.+||+.+|++||++.+|++.|+.+
T Consensus 234 ~~~~-~~~~~----~--~~~----~~~~~~~~-~---~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~ 286 (290)
T cd05045 234 APER-LFNLL----K--TGY----RMERPENC-S---EEMYNLMLTCWKQEPDKRPTFADISKELEKM 286 (290)
T ss_pred CHHH-HHHHH----h--CCC----CCCCCCCC-C---HHHHHHHHHHccCCcccCCCHHHHHHHHHHH
Confidence 3322 11111 1 100 00111111 1 2455677799999999999999999999764
No 153
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=4e-37 Score=328.22 Aligned_cols=256 Identities=21% Similarity=0.299 Sum_probs=190.4
Q ss_pred cccccCCcEEEEEEECC---CcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEeccCCCc
Q 003278 520 RVAEMDFGTAYQGFLDN---HQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRI 596 (834)
Q Consensus 520 ~ig~g~~g~vy~~~~~~---~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~~g~ 596 (834)
.||+|+||.||+|...+ +..+|+|.+...........|.+|+.++++++||||++++|++.+....++||||+++|+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD 81 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence 58999999999998643 346899988765544445678999999999999999999999999899999999999999
Q ss_pred hhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCCCC
Q 003278 597 LSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGH 676 (834)
Q Consensus 597 L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~~~ 676 (834)
|.+++...... .....++..+..++.|++.||+|||+ .+++||||||+||+++.++.+|++|||+++.......
T Consensus 82 L~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~-- 155 (269)
T cd05087 82 LKGYLRSCRKA-ELMTPDPTTLQRMACEIALGLLHLHK---NNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY-- 155 (269)
T ss_pred HHHHHHHhhhc-ccccccHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEECCccccccccCcce--
Confidence 99998754321 12246777888999999999999996 6899999999999999999999999999965332211
Q ss_pred cccccCccccccccCccchhccccC-------CCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcCc
Q 003278 677 RKATSGNRSVRGIFGYMSPEYIESG-------EATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRP 748 (834)
Q Consensus 677 ~~~~~~~~~~~Gt~~Y~aPE~~~~~-------~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 748 (834)
........|+..|+|||++... .++.++|||||||++|||+| |+.|+....+.......+. ..
T Consensus 156 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~------~~ 226 (269)
T cd05087 156 ---YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVR------EQ 226 (269)
T ss_pred ---eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhh------cc
Confidence 0111234578899999998642 35789999999999999996 9989865433322111110 11
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHc
Q 003278 749 LAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795 (834)
Q Consensus 749 ~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~ 795 (834)
.....++.+.... .+. +..++..|| .+|++|||+.+|+..|+
T Consensus 227 ~~~~~~~~~~~~~-~~~---~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 227 QLKLPKPRLKLPL-SDR---WYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred cCCCCCCccCCCC-ChH---HHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 1112222222111 223 344555899 68999999999998874
No 154
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=2.4e-37 Score=343.12 Aligned_cols=268 Identities=23% Similarity=0.311 Sum_probs=201.6
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC---hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVY 187 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 187 (834)
++|...+.||+|+||.||+|....+|+.||||++.... ......+.+|+.++..++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 46888899999999999999998899999999986532 234567889999999999999999999999999999999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhh
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARW 267 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 267 (834)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 81 e~~~~~~L~~~l~~~-------~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~ 150 (350)
T cd05573 81 EYMPGGDLMNLLIRK-------DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKK 150 (350)
T ss_pred cCCCCCCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCcc
Confidence 999999999998653 3588899999999999999999985 999999999999999999999999999986
Q ss_pred hhhhhhhhhhcc-------------cccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCcc
Q 003278 268 LEHELQYQMRTS-------------SARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRA 334 (834)
Q Consensus 268 ~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p 334 (834)
+........... ................||+.|+|||.+... .++.++|||||||++|||+||+.|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~ell~g~~P 229 (350)
T cd05573 151 MNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGT-PYGLECDWWSLGVILYEMLYGFPP 229 (350)
T ss_pred CcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCC-CCCCceeeEecchhhhhhccCCCC
Confidence 543210000000 000000000112345699999999998655 679999999999999999999999
Q ss_pred CCCCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCc-hhhHHHH
Q 003278 335 VDLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPS-MKWVIEA 404 (834)
Q Consensus 335 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs-m~~V~~~ 404 (834)
|...... .....+.......... .. ... ...+..+...|+. +|.+||+ +.++++.
T Consensus 230 f~~~~~~------~~~~~i~~~~~~~~~p--~~--~~~----~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 230 FYSDTLQ------ETYNKIINWKESLRFP--PD--PPV----SPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred CCCCCHH------HHHHHHhccCCcccCC--CC--CCC----CHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 8653211 1111111100000000 00 001 2356788889997 9999999 9999864
No 155
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=3.1e-37 Score=346.54 Aligned_cols=261 Identities=20% Similarity=0.305 Sum_probs=199.7
Q ss_pred CcCcCCcccccCCcEEEEEEECC------CcEEEEEEecCCCChhHHHHHHHHHHHHHhcc-CCCceeEEEEEeeCCeEE
Q 003278 514 NFSESQRVAEMDFGTAYQGFLDN------HQYVLVKRLGMSKCPALRTRFSNELQNLARLR-HRNLVQLCGWCTEQGEML 586 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~~~------~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~-HpNiv~l~g~~~~~~~~~ 586 (834)
++...+.||+|+||.||+|...+ +..||||+++........+.|.+|+.+|.++. |||||+++|+|...+..+
T Consensus 38 ~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~ 117 (401)
T cd05107 38 NLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIY 117 (401)
T ss_pred HeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcE
Confidence 45566889999999999998642 35799999976554445567999999999997 999999999999999999
Q ss_pred EEEeccCCCchhhhhhcCCCC-----------------------------------------------------------
Q 003278 587 VIYDYSATRILSHLLFHNNHR----------------------------------------------------------- 607 (834)
Q Consensus 587 lv~Ey~~~g~L~~~l~~~~~~----------------------------------------------------------- 607 (834)
+||||+++|+|.++++.....
T Consensus 118 iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (401)
T cd05107 118 IITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKG 197 (401)
T ss_pred EEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchh
Confidence 999999999999998754210
Q ss_pred ---------------------------------CCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecC
Q 003278 608 ---------------------------------IGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDP 654 (834)
Q Consensus 608 ---------------------------------~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~ 654 (834)
.....++|...+.|+.|++.||+|||+ .+|+||||||+|||+++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrdlkp~NiLl~~ 274 (401)
T cd05107 198 TVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS---KNCVHRDLAARNVLICE 274 (401)
T ss_pred hhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc---CCcCcccCCcceEEEeC
Confidence 011247788889999999999999996 69999999999999999
Q ss_pred CCCceEeeeeeccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCch
Q 003278 655 DMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEG 733 (834)
Q Consensus 655 ~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~ 733 (834)
++.+|++|||+++........ .......|++.|||||++.+..++.++|||||||++|||++ |+.|+.......
T Consensus 275 ~~~~kL~DfGla~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~ 349 (401)
T cd05107 275 GKLVKICDFGLARDIMRDSNY-----ISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNE 349 (401)
T ss_pred CCEEEEEecCcceeccccccc-----ccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchH
Confidence 999999999999764322110 11123457889999999998889999999999999999998 888875432222
Q ss_pred hHHHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHcc
Q 003278 734 LLVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDG 796 (834)
Q Consensus 734 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~ 796 (834)
.....+. ...++ ...... .. .+.+++.+||..+|++||+|.+|++.|+.
T Consensus 350 ~~~~~~~---~~~~~-------~~p~~~-~~---~l~~li~~cl~~~P~~RPs~~ell~~L~~ 398 (401)
T cd05107 350 QFYNAIK---RGYRM-------AKPAHA-SD---EIYEIMQKCWEEKFEIRPDFSQLVHLVGD 398 (401)
T ss_pred HHHHHHH---cCCCC-------CCCCCC-CH---HHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 1111111 11110 011111 22 35556669999999999999999999875
No 156
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.3e-37 Score=335.56 Aligned_cols=262 Identities=26% Similarity=0.351 Sum_probs=190.3
Q ss_pred CCCCCCeeeccCCeEEEEEEECC-CCeEEEEEEecccC--hhhHHHHHHHHHHHHhC---CCCceeeEeeeEEe-----C
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPS-DGTVVAVKCLAEKG--ERFEKTFAAELVAVAHL---RHRNLVRLRGWCVH-----E 180 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l---~H~nIv~l~g~~~~-----~ 180 (834)
+|+..+.||+|+||.||+|.... +|+.||||.+.... ......+.+|+.+++.+ +||||++++++|.. .
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 58888999999999999999743 57899999886432 22334566777777665 69999999999863 3
Q ss_pred CEEEEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEe
Q 003278 181 DQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLG 260 (834)
Q Consensus 181 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~ 260 (834)
..+++||||++ ++|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~~~-----~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~ 152 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDKVP-----EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 152 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHhCC-----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEc
Confidence 46899999996 68988886532 23589999999999999999999985 99999999999999999999999
Q ss_pred eccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCC
Q 003278 261 DFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340 (834)
Q Consensus 261 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~ 340 (834)
|||+++..... .......||+.|+|||.+... .++.++|||||||++|||+||+.||.....
T Consensus 153 Dfg~~~~~~~~-----------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~~f~~~~~ 214 (290)
T cd07862 153 DFGLARIYSFQ-----------------MALTSVVVTLWYRAPEVLLQS-SYATPVDLWSVGCIFAEMFRRKPLFRGSSD 214 (290)
T ss_pred cccceEeccCC-----------------cccccccccccccChHHHhCC-CCCCccchHHHHHHHHHHHcCCCCcCCCCH
Confidence 99999753211 012345699999999998654 678899999999999999999999875322
Q ss_pred CccchHHHHHHHHhh---cCcccc---ccccccCC-CCCCH-----HHHHHHHHHHHHhcccCCCCCCchhhHHH
Q 003278 341 DDQIILLDWIRRLSD---EGKVLQ---AGDNRLSD-GSYKL-----CDMEHLTHLALLCTLHNPHLRPSMKWVIE 403 (834)
Q Consensus 341 ~~~~~l~~~~~~~~~---~~~~~~---~~d~~l~~-~~~~~-----~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~ 403 (834)
.+ ....+..... .....+ ........ ..... .....+.++...|++.||++||++.++++
T Consensus 215 ~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 215 VD---QLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred HH---HHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 11 1111111100 000000 00000000 00000 01134678999999999999999999985
No 157
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=3.8e-37 Score=328.08 Aligned_cols=260 Identities=25% Similarity=0.359 Sum_probs=204.6
Q ss_pred HHHhhcCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEE
Q 003278 105 ELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLL 184 (834)
Q Consensus 105 el~~~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~ 184 (834)
|++.+++++.....||+|+||.||+|.+..++..||+|.+........+.+.+|+.++++++|+||+++++++...+..+
T Consensus 2 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (268)
T cd06624 2 EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFK 81 (268)
T ss_pred CcccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEE
Confidence 45678889988899999999999999998889999999987766666778999999999999999999999999999999
Q ss_pred EEEEccCCCCHhHHHhcCCCccccCCCC--CHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECC-CCceEEee
Q 003278 185 LVYDYMPNRSLDRVLFRRPENLEAAAPL--NWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDS-QYNARLGD 261 (834)
Q Consensus 185 lV~Ey~~~gsL~~~l~~~~~~~~~~~~l--~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~-~~~~kl~D 261 (834)
+|+||+++++|.+++.... .++ ++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|
T Consensus 82 lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~d 152 (268)
T cd06624 82 IFMEQVPGGSLSALLRSKW------GPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISD 152 (268)
T ss_pred EEEecCCCCCHHHHHHHhc------ccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEec
Confidence 9999999999999986532 234 7888899999999999999985 9999999999999986 67899999
Q ss_pred ccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCC-CCCcccceeehhhHHHHHHhCCccCCCCCC
Q 003278 262 FGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGS-VATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340 (834)
Q Consensus 262 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~-~~~~ksDV~SfGvvl~ElltG~~p~~~~~~ 340 (834)
||++..+.... .......|++.|+|||++..+. .++.++|||||||++|||++|+.|+.....
T Consensus 153 fg~~~~~~~~~----------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~ 216 (268)
T cd06624 153 FGTSKRLAGIN----------------PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGE 216 (268)
T ss_pred chhheecccCC----------------CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccC
Confidence 99987542110 0012234889999999986542 368899999999999999999999853221
Q ss_pred CccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 341 DDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 341 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
.. ...|...... ..+.+. ......+..++.+||+.+|.+||++.++++.
T Consensus 217 ~~---~~~~~~~~~~-------~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 217 PQ---AAMFKVGMFK-------IHPEIP-----ESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred hh---hhHhhhhhhc-------cCCCCC-----cccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 11 1111111100 011111 1112457789999999999999999999863
No 158
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=2.4e-37 Score=329.48 Aligned_cols=258 Identities=21% Similarity=0.355 Sum_probs=201.4
Q ss_pred hhCcCcCCcccccCCcEEEEEEECC-C---cEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEE
Q 003278 512 TNNFSESQRVAEMDFGTAYQGFLDN-H---QYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLV 587 (834)
Q Consensus 512 t~~f~~~~~ig~g~~g~vy~~~~~~-~---~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~l 587 (834)
+++|...+.||+|+||.||+|.... + ..+|+|.+.........+.|.+|++++++++||||+++++++.+.+..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 3567788899999999999999742 3 37999998765555556789999999999999999999999999999999
Q ss_pred EEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecc
Q 003278 588 IYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAE 667 (834)
Q Consensus 588 v~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~ 667 (834)
||||+++++|..++.... ..++|..+..++.|++.||+|||+ .+|+||||||+||++++++.+|++|||++.
T Consensus 84 v~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~ 155 (268)
T cd05063 84 ITEYMENGALDKYLRDHD-----GEFSSYQLVGMLRGIAAGMKYLSD---MNYVHRDLAARNILVNSNLECKVSDFGLSR 155 (268)
T ss_pred EEEcCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEEcCCCcEEECCCccce
Confidence 999999999999986532 247899999999999999999996 689999999999999999999999999997
Q ss_pred ccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhc
Q 003278 668 FLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARK 746 (834)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~ 746 (834)
........ .........+..|+|||++..+.++.++|||||||++|||+| |..|+....... ....+.. .
T Consensus 156 ~~~~~~~~----~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~-~~~~i~~---~- 226 (268)
T cd05063 156 VLEDDPEG----TYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHE-VMKAIND---G- 226 (268)
T ss_pred eccccccc----ceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHH-HHHHHhc---C-
Confidence 65432111 001111233567999999998899999999999999999998 999986443221 2221111 0
Q ss_pred CccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHcc
Q 003278 747 RPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDG 796 (834)
Q Consensus 747 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~ 796 (834)
..... ... ....+.+++.+||+.+|++||+|.+|++.|+.
T Consensus 227 ~~~~~------~~~----~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~ 266 (268)
T cd05063 227 FRLPA------PMD----CPSAVYQLMLQCWQQDRARRPRFVDIVNLLDK 266 (268)
T ss_pred CCCCC------CCC----CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 00000 001 11345677889999999999999999999865
No 159
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.6e-37 Score=332.91 Aligned_cols=262 Identities=27% Similarity=0.427 Sum_probs=204.3
Q ss_pred cCCCCCCCeeeccCCeEEEEEEECC-----CCeEEEEEEecccChh-hHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEE
Q 003278 110 SNGFDEDEVLGSGGFGKVYRAVLPS-----DGTVVAVKCLAEKGER-FEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQL 183 (834)
Q Consensus 110 t~~f~~~~~LG~G~fG~Vy~~~~~~-----~g~~vAvK~l~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~ 183 (834)
.++|...+.||+|+||.||+|.... ++..||||.+...... ..+.|.+|+.++.+++||||+++++++...+..
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 83 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP 83 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence 3458888999999999999998742 3578999998765433 567899999999999999999999999999999
Q ss_pred EEEEEccCCCCHhHHHhcCCCc-------cccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCc
Q 003278 184 LLVYDYMPNRSLDRVLFRRPEN-------LEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYN 256 (834)
Q Consensus 184 ~lV~Ey~~~gsL~~~l~~~~~~-------~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~ 256 (834)
++||||+++|+|.+++...... ......+++.....++.|++.||.|||+. +++||||||+|||++.++.
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDLV 160 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCCe
Confidence 9999999999999999754321 11235689999999999999999999985 9999999999999999999
Q ss_pred eEEeeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccC
Q 003278 257 ARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAV 335 (834)
Q Consensus 257 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~ 335 (834)
+||+|||+++.+...... .......+++.|+|||++..+ .++.++|||||||++|||+| |+.|+
T Consensus 161 ~kl~d~g~~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~e~~~~g~~p~ 225 (280)
T cd05049 161 VKIGDFGMSRDVYTTDYY--------------RVGGHTMLPIRWMPPESIMYR-KFTTESDVWSFGVVLWEIFTYGKQPW 225 (280)
T ss_pred EEECCcccceecccCcce--------------ecCCCCcccceecChhhhccC-CcchhhhHHHHHHHHHHHHhcCCCCC
Confidence 999999998754221100 001223467899999998655 67999999999999999999 99987
Q ss_pred CCCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhh
Q 003278 336 DLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVS 406 (834)
Q Consensus 336 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~ 406 (834)
..... ......+. .+...... .. ....+.+++..||+.||++||++.||++.|.
T Consensus 226 ~~~~~---~~~~~~~~----~~~~~~~~------~~----~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 226 YGLSN---EEVIECIT----QGRLLQRP------RT----CPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred CCCCH---HHHHHHHH----cCCcCCCC------CC----CCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 54321 11222221 22211110 11 1246789999999999999999999999875
No 160
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.8e-37 Score=328.51 Aligned_cols=251 Identities=21% Similarity=0.339 Sum_probs=196.4
Q ss_pred CcCcCCcccccCCcEEEEEEECCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEeccC
Q 003278 514 NFSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSA 593 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~ 593 (834)
+|...+.||+|+||.||.|...++..+|||.+..... ..+.|.+|+.++.+++||||++++++|.+.+..++||||++
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcc--cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 3455678999999999999987777799998864332 23578999999999999999999999999899999999999
Q ss_pred CCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCC
Q 003278 594 TRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRND 673 (834)
Q Consensus 594 ~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~ 673 (834)
+|+|.+++..... .++|..++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++......
T Consensus 83 ~~~l~~~i~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05113 83 NGCLLNYLREHGK-----RFQPSQLLEMCKDVCEGMAYLES---KQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE 154 (256)
T ss_pred CCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCCEEECCCccceecCCCc
Confidence 9999998865322 47899999999999999999996 699999999999999999999999999987653221
Q ss_pred CCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcCccccc
Q 003278 674 HGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRPLAEL 752 (834)
Q Consensus 674 ~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (834)
. .......|+..|+|||++.++.++.++|||||||++|||+| |..|+....+. ........ ..+..
T Consensus 155 ~------~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~-~~~~~~~~---~~~~~--- 221 (256)
T cd05113 155 Y------TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS-ETVEKVSQ---GLRLY--- 221 (256)
T ss_pred e------eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH-HHHHHHhc---CCCCC---
Confidence 1 00112246678999999998899999999999999999999 88887643322 11111111 11110
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHc
Q 003278 753 VDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795 (834)
Q Consensus 753 ~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~ 795 (834)
..... . ..+.+++.+||+.+|++|||+.+|+..|+
T Consensus 222 ----~~~~~-~---~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 222 ----RPHLA-S---EKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred ----CCCCC-C---HHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 00111 1 34566777999999999999999998874
No 161
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=2.6e-37 Score=332.74 Aligned_cols=252 Identities=23% Similarity=0.302 Sum_probs=196.6
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC---hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEE
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYD 188 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 188 (834)
+|+..++||+|+||.||++....+++.||||.+.... ......+.+|+.++++++||||+++++++..++.+++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4778899999999999999998889999999986432 2233557889999999999999999999999999999999
Q ss_pred ccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhh
Q 003278 189 YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWL 268 (834)
Q Consensus 189 y~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 268 (834)
|+++|+|..++.... ...+++..+..++.|++.||.|||+. +|+||||||+|||+++++.++|+|||+++.+
T Consensus 81 ~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~ 152 (285)
T cd05605 81 LMNGGDLKFHIYNMG-----NPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEI 152 (285)
T ss_pred ccCCCcHHHHHHhcC-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceec
Confidence 999999998886432 24589999999999999999999985 9999999999999999999999999998754
Q ss_pred hhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHH
Q 003278 269 EHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLD 348 (834)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~ 348 (834)
.... ......||+.|+|||.+... .++.++|||||||++|||++|+.||....... ...
T Consensus 153 ~~~~-----------------~~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~---~~~ 211 (285)
T cd05605 153 PEGE-----------------TIRGRVGTVGYMAPEVVKNE-RYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV---KRE 211 (285)
T ss_pred CCCC-----------------ccccccCCCCccCcHHhcCC-CCCccccchhHHHHHHHHHHCCCCCCCCchhh---HHH
Confidence 2110 01234689999999998654 67899999999999999999999987432211 111
Q ss_pred HHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCC-----chhhHHH
Q 003278 349 WIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRP-----SMKWVIE 403 (834)
Q Consensus 349 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RP-----sm~~V~~ 403 (834)
.+........ . .+...-...+.+++..||+.||.+|| ++.+++.
T Consensus 212 ~~~~~~~~~~------~-----~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 212 EVERRVKEDQ------E-----EYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred HHHHHhhhcc------c-----ccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 1111111100 0 01111124578899999999999999 5666654
No 162
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=2.4e-37 Score=338.97 Aligned_cols=236 Identities=25% Similarity=0.325 Sum_probs=186.3
Q ss_pred CeeeccCCeEEEEEEECCCCeEEEEEEeccc---ChhhHHHHHHHHHHHHhC-CCCceeeEeeeEEeCCEEEEEEEccCC
Q 003278 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK---GERFEKTFAAELVAVAHL-RHRNLVRLRGWCVHEDQLLLVYDYMPN 192 (834)
Q Consensus 117 ~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 192 (834)
++||+|+||.||+|....+|+.||||++... .....+.+..|..++..+ +||||+++++++...+..|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 4699999999999999888999999998653 223345677888888865 799999999999999999999999999
Q ss_pred CCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhh
Q 003278 193 RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHEL 272 (834)
Q Consensus 193 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~ 272 (834)
|+|...+... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~~L~~~l~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~ 150 (321)
T cd05591 81 GDLMFQIQRS-------RKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG 150 (321)
T ss_pred CcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCC
Confidence 9999888543 3588999999999999999999985 99999999999999999999999999986421110
Q ss_pred hhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHHHH
Q 003278 273 QYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIRR 352 (834)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~~~ 352 (834)
.......||+.|+|||++... .++.++|||||||++|||+||+.||...... .+ ...
T Consensus 151 ----------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~tg~~Pf~~~~~~---~~---~~~ 207 (321)
T cd05591 151 ----------------VTTTTFCGTPDYIAPEILQEL-EYGPSVDWWALGVLMYEMMAGQPPFEADNED---DL---FES 207 (321)
T ss_pred ----------------ccccccccCccccCHHHHcCC-CCCCccceechhHHHHHHhcCCCCCCCCCHH---HH---HHH
Confidence 012345699999999988654 6789999999999999999999999743211 11 111
Q ss_pred HhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCc
Q 003278 353 LSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPS 397 (834)
Q Consensus 353 ~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs 397 (834)
... +.. ..+ ... ...+.++...|++.||++||+
T Consensus 208 i~~-~~~---~~p----~~~----~~~~~~ll~~~L~~dp~~R~~ 240 (321)
T cd05591 208 ILH-DDV---LYP----VWL----SKEAVSILKAFMTKNPNKRLG 240 (321)
T ss_pred HHc-CCC---CCC----CCC----CHHHHHHHHHHhccCHHHcCC
Confidence 111 110 000 011 135778999999999999994
No 163
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=8.3e-37 Score=334.67 Aligned_cols=238 Identities=29% Similarity=0.340 Sum_probs=185.1
Q ss_pred CeeeccCCeEEEEEEECCCCeEEEEEEecccC---hhhHHHHHHHHH-HHHhCCCCceeeEeeeEEeCCEEEEEEEccCC
Q 003278 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAELV-AVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPN 192 (834)
Q Consensus 117 ~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~---~~~~~~~~~E~~-~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 192 (834)
++||+|+||.||+|+...+|..||+|++.... ......+..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 47999999999999998899999999986432 223344555654 67889999999999999999999999999999
Q ss_pred CCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhh
Q 003278 193 RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHEL 272 (834)
Q Consensus 193 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~ 272 (834)
|+|..++... ..+++.....++.||++||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~L~~~l~~~-------~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~- 149 (321)
T cd05603 81 GELFFHLQRE-------RCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP- 149 (321)
T ss_pred CCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCC-
Confidence 9998887542 3577888899999999999999985 9999999999999999999999999998742110
Q ss_pred hhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHHHH
Q 003278 273 QYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIRR 352 (834)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~~~ 352 (834)
........||+.|+|||.+... .++.++|||||||++|||+||+.||.... .......
T Consensus 150 ---------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~------~~~~~~~ 207 (321)
T cd05603 150 ---------------EETTSTFCGTPEYLAPEVLRKE-PYDRTVDWWCLGAVLYEMLYGLPPFYSRD------VSQMYDN 207 (321)
T ss_pred ---------------CCccccccCCcccCCHHHhcCC-CCCCcCcccccchhhhhhhcCCCCCCCCC------HHHHHHH
Confidence 0112345799999999998654 67899999999999999999999986431 1111111
Q ss_pred HhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchh
Q 003278 353 LSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMK 399 (834)
Q Consensus 353 ~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~ 399 (834)
... +. . .+. .. ....+.++...|++.+|.+||+..
T Consensus 208 i~~-~~-~-----~~~-~~----~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 208 ILH-KP-L-----QLP-GG----KTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred Hhc-CC-C-----CCC-CC----CCHHHHHHHHHHccCCHhhcCCCC
Confidence 111 11 0 111 11 123577899999999999999864
No 164
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=8.4e-37 Score=334.95 Aligned_cols=239 Identities=29% Similarity=0.337 Sum_probs=186.8
Q ss_pred CeeeccCCeEEEEEEECCCCeEEEEEEecccC---hhhHHHHHHHHH-HHHhCCCCceeeEeeeEEeCCEEEEEEEccCC
Q 003278 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAELV-AVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPN 192 (834)
Q Consensus 117 ~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~---~~~~~~~~~E~~-~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 192 (834)
+.||+|+||+||+|+...+|+.||||++.... ....+.+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 47999999999999999899999999986432 122344555554 56789999999999999999999999999999
Q ss_pred CCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhh
Q 003278 193 RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHEL 272 (834)
Q Consensus 193 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~ 272 (834)
|+|..++... ..+++.....++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 81 g~L~~~l~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~- 149 (323)
T cd05575 81 GELFFHLQRE-------RSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH- 149 (323)
T ss_pred CCHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccC-
Confidence 9999888643 3578899999999999999999985 9999999999999999999999999998742110
Q ss_pred hhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHHHH
Q 003278 273 QYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIRR 352 (834)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~~~ 352 (834)
........||+.|+|||.+... .++.++|||||||++|||+||+.||..... ......
T Consensus 150 ---------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~ell~g~~pf~~~~~------~~~~~~ 207 (323)
T cd05575 150 ---------------SKTTSTFCGTPEYLAPEVLRKQ-PYDRTVDWWCLGAVLYEMLYGLPPFYSRDT------AEMYDN 207 (323)
T ss_pred ---------------CCccccccCChhhcChhhhcCC-CCCccccccccchhhhhhhcCCCCCCCCCH------HHHHHH
Confidence 0113445799999999998654 678999999999999999999999864311 111112
Q ss_pred HhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhh
Q 003278 353 LSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKW 400 (834)
Q Consensus 353 ~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~ 400 (834)
... +.. .+. ... ...+.++...|++.||.+||++.+
T Consensus 208 i~~-~~~------~~~-~~~----~~~~~~li~~~l~~~p~~R~~~~~ 243 (323)
T cd05575 208 ILN-KPL------RLK-PNI----SVSARHLLEGLLQKDRTKRLGAKD 243 (323)
T ss_pred HHc-CCC------CCC-CCC----CHHHHHHHHHHhhcCHHhCCCCCC
Confidence 111 110 111 111 235778999999999999999863
No 165
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.1e-37 Score=343.98 Aligned_cols=245 Identities=15% Similarity=0.181 Sum_probs=193.3
Q ss_pred hCcCcCCcccccCCcEEEEEEECC--CcEEEEEEecCCC--ChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLDN--HQYVLVKRLGMSK--CPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVI 588 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~~--~~~vavK~~~~~~--~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv 588 (834)
++|...+.||+|+||.||+|...+ +..||+|.+.... .....+.+.+|+.+++.++|||||++++++.+.+..++|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 457777889999999999998643 3589999885432 223346788999999999999999999999999999999
Q ss_pred EeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccc
Q 003278 589 YDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEF 668 (834)
Q Consensus 589 ~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~ 668 (834)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 110 ~Ey~~~g~L~~~i~~~~------~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~ 180 (340)
T PTZ00426 110 LEFVIGGEFFTFLRRNK------RFPNDVGCFYAAQIVLIFEYLQS---LNIVYRDLKPENLLLDKDGFIKMTDFGFAKV 180 (340)
T ss_pred EeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEecCCCCee
Confidence 99999999999986542 37888889999999999999996 6999999999999999999999999999976
Q ss_pred cccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCc
Q 003278 669 LTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRP 748 (834)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~ 748 (834)
+... ..+..||+.|||||++.+..++.++|||||||++|||+||..||....+.. ....+. .....
T Consensus 181 ~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~-~~~~i~---~~~~~ 246 (340)
T PTZ00426 181 VDTR----------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLL-IYQKIL---EGIIY 246 (340)
T ss_pred cCCC----------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHH-HHHHHh---cCCCC
Confidence 4321 224679999999999998889999999999999999999999997543321 111111 11000
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCC-----ChhHHHH
Q 003278 749 LAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRP-----SMRQILS 792 (834)
Q Consensus 749 ~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RP-----tm~~v~~ 792 (834)
.+... ...+ ..++.+|++.||++|+ |+.++.+
T Consensus 247 --------~p~~~-~~~~---~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 247 --------FPKFL-DNNC---KHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred --------CCCCC-CHHH---HHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 11111 2333 3455589999999995 7888765
No 166
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=2.6e-37 Score=332.76 Aligned_cols=263 Identities=19% Similarity=0.221 Sum_probs=195.5
Q ss_pred CcCcCCcccccCCcEEEEEEEC-CCcEEEEEEecCCC-ChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEec
Q 003278 514 NFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSK-CPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY 591 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~-~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey 591 (834)
+|...+.||+|+||.||+|... ++..||||++.... .....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY 81 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence 5677788999999999999975 57889999987543 233456788999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccccc
Q 003278 592 SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTR 671 (834)
Q Consensus 592 ~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~ 671 (834)
++++++..+.... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++..+..
T Consensus 82 ~~~~~l~~~~~~~------~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 152 (287)
T cd07848 82 VEKNMLELLEEMP------NGVPPEKVRSYIYQLIKAIHWCHK---NDIVHRDIKPENLLISHNDVLKLCDFGFARNLSE 152 (287)
T ss_pred CCCCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccCcccccc
Confidence 9998887554321 237888889999999999999996 6999999999999999999999999999986533
Q ss_pred CCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhh------
Q 003278 672 NDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEAR------ 745 (834)
Q Consensus 672 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~------ 745 (834)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........+.. .......
T Consensus 153 ~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~ 225 (287)
T cd07848 153 GSN------ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFT-IQKVLGPLPAEQM 225 (287)
T ss_pred ccc------ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHH-HHHhhCCCCHHHH
Confidence 211 112245799999999999988999999999999999999999999865432221111 1110000
Q ss_pred ----cCc-cccccccccCCCCCH------HHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 746 ----KRP-LAELVDLSLNGEYNH------KELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 746 ----~~~-~~~~~d~~l~~~~~~------~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
..+ ......+........ ..-..+.+++.+|++.||++|||+.++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 226 KLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred HhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000 000000000000000 00123566777999999999999999874
No 167
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.4e-37 Score=341.08 Aligned_cols=242 Identities=24% Similarity=0.281 Sum_probs=191.2
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC---hhhHHHHHHHHHHHHhC-CCCceeeEeeeEEeCCEEEEEE
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAELVAVAHL-RHRNLVRLRGWCVHEDQLLLVY 187 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~lV~ 187 (834)
+|+..+.||+|+||.||+|....++..||||.+.... ....+.+..|..++..+ +|++|+++++++...+.+++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4778899999999999999998899999999986532 22334567788888776 5899999999999999999999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhh
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARW 267 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 267 (834)
||+++|+|..++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 81 E~~~~g~L~~~~~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~ 150 (323)
T cd05616 81 EYVNGGDLMYQIQQV-------GRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 150 (323)
T ss_pred cCCCCCCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCcee
Confidence 999999999888543 3588899999999999999999985 999999999999999999999999999874
Q ss_pred hhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHH
Q 003278 268 LEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347 (834)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~ 347 (834)
.... ........||+.|+|||++... .++.++|||||||++|||+||+.||..... ..+.
T Consensus 151 ~~~~----------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~Pf~~~~~---~~~~ 210 (323)
T cd05616 151 NMWD----------------GVTTKTFCGTPDYIAPEIIAYQ-PYGKSVDWWAFGVLLYEMLAGQAPFEGEDE---DELF 210 (323)
T ss_pred cCCC----------------CCccccCCCChhhcCHHHhcCC-CCCCccchhchhHHHHHHHhCCCCCCCCCH---HHHH
Confidence 2110 0112345799999999998754 679999999999999999999999964321 1121
Q ss_pred HHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCch
Q 003278 348 DWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSM 398 (834)
Q Consensus 348 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm 398 (834)
..+ .. ... ... ... ...+.+++..|++.+|.+||+.
T Consensus 211 ~~i---~~-~~~------~~p-~~~----s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 211 QSI---ME-HNV------AYP-KSM----SKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred HHH---Hh-CCC------CCC-CcC----CHHHHHHHHHHcccCHHhcCCC
Confidence 111 11 111 010 111 2357789999999999999985
No 168
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.6e-37 Score=322.52 Aligned_cols=267 Identities=27% Similarity=0.347 Sum_probs=201.4
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccCh--hhHHHHHHHHHHHHhCCCCc-eeeEeeeEEeCC------E
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGE--RFEKTFAAELVAVAHLRHRN-LVRLRGWCVHED------Q 182 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~H~n-Iv~l~g~~~~~~------~ 182 (834)
.|...++||+|+||+||+|+.+.+|+.||+|++.-..+ .......+|+.+|.+|+|+| ||+|++++...+ .
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~ 91 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK 91 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence 45666789999999999999999999999999865433 35566789999999999999 999999999887 7
Q ss_pred EEEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeec
Q 003278 183 LLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDF 262 (834)
Q Consensus 183 ~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 262 (834)
++||+||+. -+|..++...+... ..++-..++.++.|+++||+|||++ +|+||||||.|||+++++.+||+||
T Consensus 92 l~lvfe~~d-~DL~~ymd~~~~~~---~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDF 164 (323)
T KOG0594|consen 92 LYLVFEFLD-RDLKKYMDSLPKKP---QGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADF 164 (323)
T ss_pred EEEEEEeec-ccHHHHHHhccccc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeecc
Confidence 999999985 58999987653210 3455688999999999999999996 9999999999999999999999999
Q ss_pred cchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCc
Q 003278 263 GLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDD 342 (834)
Q Consensus 263 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~ 342 (834)
|+|+...-. ...-+..++|.+|.|||++.....|+...||||+||++.||++++.-|......+
T Consensus 165 GlAra~~ip----------------~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ 228 (323)
T KOG0594|consen 165 GLARAFSIP----------------MRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEID 228 (323)
T ss_pred chHHHhcCC----------------cccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHH
Confidence 999853211 1113556799999999999877789999999999999999999998876554322
Q ss_pred cchHHHHHHHHhhcC---c---cccccccc--cCC--CCCCHHH-----HHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 343 QIILLDWIRRLSDEG---K---VLQAGDNR--LSD--GSYKLCD-----MEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 343 ~~~l~~~~~~~~~~~---~---~~~~~d~~--l~~--~~~~~~~-----~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
+ ..-+.+..... . +....|-. ... +..+... .....++...|++.+|.+|.|....+++
T Consensus 229 q---l~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 229 Q---LFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred H---HHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 2 12222222110 0 00000100 000 0000000 1346788999999999999999988764
No 169
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.5e-37 Score=339.81 Aligned_cols=239 Identities=21% Similarity=0.303 Sum_probs=186.1
Q ss_pred CeeeccCCeEEEEEEECCCCeEEEEEEecccC---hhhHHHHHHHHHHHHh-CCCCceeeEeeeEEeCCEEEEEEEccCC
Q 003278 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAELVAVAH-LRHRNLVRLRGWCVHEDQLLLVYDYMPN 192 (834)
Q Consensus 117 ~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~-l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 192 (834)
+.||+|+||.||+|....+++.||||++.... ....+.+..|..++.. .+||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 47999999999999998899999999986531 2233445667777664 5899999999999999999999999999
Q ss_pred CCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhh
Q 003278 193 RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHEL 272 (834)
Q Consensus 193 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~ 272 (834)
|+|..++... ..+++.....++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~~~~~-------~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~ 150 (316)
T cd05592 81 GDLMFHIQSS-------GRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE 150 (316)
T ss_pred CcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC
Confidence 9999888543 3578889999999999999999985 99999999999999999999999999997432110
Q ss_pred hhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHHHH
Q 003278 273 QYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIRR 352 (834)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~~~ 352 (834)
.......||+.|+|||.+... .++.++|||||||++|||++|+.||...... .....
T Consensus 151 ----------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~ell~G~~Pf~~~~~~------~~~~~ 207 (316)
T cd05592 151 ----------------GKASTFCGTPDYIAPEILKGQ-KYNESVDWWSFGVLLYEMLIGQSPFHGEDED------ELFDS 207 (316)
T ss_pred ----------------CccccccCCccccCHHHHcCC-CCCCcccchhHHHHHHHHHhCCCCCCCCCHH------HHHHH
Confidence 113345799999999988644 6789999999999999999999998643211 11111
Q ss_pred HhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhh
Q 003278 353 LSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKW 400 (834)
Q Consensus 353 ~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~ 400 (834)
+... .+.+. ... ...+.+++..||+.||.+||++.+
T Consensus 208 i~~~-------~~~~~-~~~----~~~~~~ll~~~l~~~P~~R~~~~~ 243 (316)
T cd05592 208 ILND-------RPHFP-RWI----SKEAKDCLSKLFERDPTKRLGVDG 243 (316)
T ss_pred HHcC-------CCCCC-CCC----CHHHHHHHHHHccCCHHHcCCChH
Confidence 1111 00110 111 134678899999999999999863
No 170
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=3.6e-37 Score=332.19 Aligned_cols=264 Identities=15% Similarity=0.209 Sum_probs=193.5
Q ss_pred hCcCcCCcccccCCcEEEEEEEC-CCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEec
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY 591 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey 591 (834)
++|...++||+|+||.||+|... ++..||+|.+...........+.+|+.++++++||||+++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 35777889999999999999864 57899999987554333345678999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccccc
Q 003278 592 SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTR 671 (834)
Q Consensus 592 ~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~ 671 (834)
+++ +|.+++...+ ..+++.....++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++....
T Consensus 85 ~~~-~l~~~l~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~ 155 (288)
T cd07871 85 LDS-DLKQYLDNCG-----NLMSMHNVKIFMFQLLRGLSYCHK---RKILHRDLKPQNLLINEKGELKLADFGLARAKSV 155 (288)
T ss_pred CCc-CHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEECcCcceeeccC
Confidence 985 8888775432 236788888999999999999996 6999999999999999999999999999975432
Q ss_pred CCCCCcccccCccccccccCccchhcccc-CCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhh-cCc-
Q 003278 672 NDHGHRKATSGNRSVRGIFGYMSPEYIES-GEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEAR-KRP- 748 (834)
Q Consensus 672 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~-~~~- 748 (834)
.. .......||+.|||||++.+ ..++.++|||||||++|||+||+.||........+.......... ...
T Consensus 156 ~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 228 (288)
T cd07871 156 PT-------KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETW 228 (288)
T ss_pred CC-------ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHh
Confidence 11 11123468999999998865 568999999999999999999999986544332221111100000 000
Q ss_pred --------cccccccccCCCCC----HHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 749 --------LAELVDLSLNGEYN----HKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 749 --------~~~~~d~~l~~~~~----~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
+.....+....... ...-....++..+|+..||.+|||+.|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 229 PGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred hccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000000000000 000123456666899999999999999974
No 171
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=3.1e-37 Score=338.49 Aligned_cols=241 Identities=24% Similarity=0.303 Sum_probs=188.1
Q ss_pred CCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC---hhhHHHHHHHHHHH---HhCCCCceeeEeeeEEeCCEEEEE
Q 003278 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAELVAV---AHLRHRNLVRLRGWCVHEDQLLLV 186 (834)
Q Consensus 113 f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l---~~l~H~nIv~l~g~~~~~~~~~lV 186 (834)
|+..+.||+|+||.||+|.+..+|+.||||++.... ....+.+.+|+.++ ++++||||+++++++...+..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 556789999999999999998899999999986432 22334566676554 577899999999999999999999
Q ss_pred EEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchh
Q 003278 187 YDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266 (834)
Q Consensus 187 ~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 266 (834)
|||+++|+|..++.. ..+++.....++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 81 ~E~~~~~~L~~~~~~--------~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~ 149 (324)
T cd05589 81 MEYAAGGDLMMHIHT--------DVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCK 149 (324)
T ss_pred EcCCCCCcHHHHhhc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCc
Confidence 999999999888743 3589999999999999999999985 99999999999999999999999999986
Q ss_pred hhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchH
Q 003278 267 WLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346 (834)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l 346 (834)
..... ........||+.|||||.+... .++.++|||||||++|||+||+.||......
T Consensus 150 ~~~~~----------------~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~G~~pf~~~~~~----- 207 (324)
T cd05589 150 EGMGF----------------GDRTSTFCGTPEFLAPEVLTET-SYTRAVDWWGLGVLIYEMLVGESPFPGDDEE----- 207 (324)
T ss_pred cCCCC----------------CCcccccccCccccCHhHhcCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCHH-----
Confidence 42110 0012346799999999988654 6789999999999999999999998643211
Q ss_pred HHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchh
Q 003278 347 LDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMK 399 (834)
Q Consensus 347 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~ 399 (834)
.....+.. +.. ... ... ...+.+++..||+.||.+||++.
T Consensus 208 -~~~~~i~~-~~~------~~p-~~~----~~~~~~li~~~L~~dP~~R~~~~ 247 (324)
T cd05589 208 -EVFDSIVN-DEV------RYP-RFL----SREAISIMRRLLRRNPERRLGSG 247 (324)
T ss_pred -HHHHHHHh-CCC------CCC-CCC----CHHHHHHHHHHhhcCHhHcCCCC
Confidence 11111111 111 010 111 13567899999999999999654
No 172
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=8.8e-37 Score=322.40 Aligned_cols=251 Identities=27% Similarity=0.393 Sum_probs=202.1
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc--ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEc
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK--GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDY 189 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 189 (834)
+|+..+.||+|+||.||+|....+|+.||+|.+... .....+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 477788999999999999999889999999987643 344567799999999999999999999999999999999999
Q ss_pred cCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhh
Q 003278 190 MPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLE 269 (834)
Q Consensus 190 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~ 269 (834)
+++++|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 81 ~~~~~L~~~l~~~~-----~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~ 152 (256)
T cd08529 81 AENGDLHKLLKMQR-----GRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLS 152 (256)
T ss_pred CCCCcHHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceecc
Confidence 99999999987532 24689999999999999999999985 99999999999999999999999999987543
Q ss_pred hhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHH
Q 003278 270 HELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDW 349 (834)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~ 349 (834)
.... ......|++.|+|||++..+ .++.++|||||||+++||+||+.|+.... .......
T Consensus 153 ~~~~----------------~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~~ 212 (256)
T cd08529 153 DNTN----------------FANTIVGTPYYLSPELCEDK-PYNEKSDVWALGVVLYECCTGKHPFDANN---QGALILK 212 (256)
T ss_pred Cccc----------------hhhccccCccccCHHHhcCC-CCCCccchHHHHHHHHHHHhCCCCCCCCC---HHHHHHH
Confidence 2110 12334588999999998765 57889999999999999999999986432 1111111
Q ss_pred HHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 350 IRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 350 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
+ ..+.... +. .. ....+.+++..||+.+|++||+|.++++.
T Consensus 213 ~----~~~~~~~-----~~-~~----~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 213 I----IRGVFPP-----VS-QM----YSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred H----HcCCCCC-----Cc-cc----cCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 1 1111111 11 11 12468899999999999999999999864
No 173
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.7e-38 Score=326.55 Aligned_cols=250 Identities=23% Similarity=0.386 Sum_probs=205.6
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc---ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK---GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVY 187 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 187 (834)
..|++.+.||+|.||.|-+++....|+.||||.+++. +++..-.+.+|+++|+.|+||||+.+|..|...+.+.|||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence 4577788999999999999998889999999998764 3444456789999999999999999999999999999999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhh
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARW 267 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 267 (834)
||..+|.|.+++.++ ..|++.....+++||..|+.|||.. +++|||||.+|||||.++++||+||||+-+
T Consensus 133 EYaS~GeLYDYiSer-------~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNl 202 (668)
T KOG0611|consen 133 EYASGGELYDYISER-------GSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNL 202 (668)
T ss_pred EecCCccHHHHHHHh-------ccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhh
Confidence 999999999999765 4688999999999999999999985 999999999999999999999999999987
Q ss_pred hhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHH
Q 003278 268 LEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347 (834)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~ 347 (834)
+..+.. -+++||+|-|.+||.+....+-.+.+|-||+||+||.|+.|..||+... ...+
T Consensus 203 y~~~kf-----------------LqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~D---hk~l- 261 (668)
T KOG0611|consen 203 YADKKF-----------------LQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRD---HKRL- 261 (668)
T ss_pred hccccH-----------------HHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCch---HHHH-
Confidence 543321 4678999999999988665555778999999999999999999998532 2222
Q ss_pred HHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhh
Q 003278 348 DWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVS 406 (834)
Q Consensus 348 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~ 406 (834)
++++. .|...+... .....-|+.+.|..||++|-++.+|.....
T Consensus 262 --vrQIs-~GaYrEP~~------------PSdA~gLIRwmLmVNP~RRATieDiAsHWW 305 (668)
T KOG0611|consen 262 --VRQIS-RGAYREPET------------PSDASGLIRWMLMVNPERRATIEDIASHWW 305 (668)
T ss_pred --HHHhh-cccccCCCC------------CchHHHHHHHHHhcCcccchhHHHHhhhhe
Confidence 22222 232222111 112345777888999999999999988754
No 174
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=2.9e-37 Score=338.03 Aligned_cols=239 Identities=24% Similarity=0.337 Sum_probs=188.6
Q ss_pred CeeeccCCeEEEEEEECCCCeEEEEEEeccc---ChhhHHHHHHHHHHHHhC-CCCceeeEeeeEEeCCEEEEEEEccCC
Q 003278 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK---GERFEKTFAAELVAVAHL-RHRNLVRLRGWCVHEDQLLLVYDYMPN 192 (834)
Q Consensus 117 ~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 192 (834)
++||+|+||.||+|..+.+++.||||++... .....+.+..|..++..+ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 4799999999999999889999999998643 223345677888888876 699999999999999999999999999
Q ss_pred CCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhh
Q 003278 193 RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHEL 272 (834)
Q Consensus 193 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~ 272 (834)
|+|..++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 81 g~L~~~i~~~-------~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~- 149 (320)
T cd05590 81 GDLMFHIQKS-------RRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN- 149 (320)
T ss_pred chHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC-
Confidence 9999888643 3588899999999999999999985 9999999999999999999999999998742110
Q ss_pred hhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHHHH
Q 003278 273 QYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIRR 352 (834)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~~~ 352 (834)
........||+.|+|||.+... .++.++|||||||++|||+||+.||...... .+ ...
T Consensus 150 ---------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~Pf~~~~~~---~~---~~~ 207 (320)
T cd05590 150 ---------------GKTTSTFCGTPDYIAPEILQEM-LYGPSVDWWAMGVLLYEMLCGHAPFEAENED---DL---FEA 207 (320)
T ss_pred ---------------CCcccccccCccccCHHHHcCC-CCCCccchhhhHHHHHHHhhCCCCCCCCCHH---HH---HHH
Confidence 0113345799999999998654 6788999999999999999999998643211 11 111
Q ss_pred HhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhh
Q 003278 353 LSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKW 400 (834)
Q Consensus 353 ~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~ 400 (834)
... +... .+ ... ...+.++...|++.||.+||+..+
T Consensus 208 i~~-~~~~---~~----~~~----~~~~~~li~~~L~~dP~~R~~~~~ 243 (320)
T cd05590 208 ILN-DEVV---YP----TWL----SQDAVDILKAFMTKNPTMRLGSLT 243 (320)
T ss_pred Hhc-CCCC---CC----CCC----CHHHHHHHHHHcccCHHHCCCCCC
Confidence 111 1110 00 111 135678999999999999999843
No 175
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=4.5e-37 Score=327.38 Aligned_cols=259 Identities=28% Similarity=0.454 Sum_probs=202.0
Q ss_pred hcCCCCCCCeeeccCCeEEEEEEECCCCe---EEEEEEeccc-ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEE
Q 003278 109 GSNGFDEDEVLGSGGFGKVYRAVLPSDGT---VVAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLL 184 (834)
Q Consensus 109 ~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~---~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~ 184 (834)
.+++|+..+.||+|+||.||+|.++.++. .+|||.+... .....+.|.+|+.++.+++||||+++++++...+..+
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (268)
T cd05063 3 HPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAM 82 (268)
T ss_pred ChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcE
Confidence 45678889999999999999999865554 7999998654 2344567899999999999999999999999999999
Q ss_pred EEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccc
Q 003278 185 LVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGL 264 (834)
Q Consensus 185 lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 264 (834)
+||||+++++|.+++... ...++|.++..++.|++.||+|||+. +++||||||+|||++.++.+||+|||+
T Consensus 83 lv~e~~~~~~L~~~~~~~------~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~ 153 (268)
T cd05063 83 IITEYMENGALDKYLRDH------DGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGL 153 (268)
T ss_pred EEEEcCCCCCHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCcc
Confidence 999999999999998643 24589999999999999999999985 999999999999999999999999999
Q ss_pred hhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCcc
Q 003278 265 ARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQ 343 (834)
Q Consensus 265 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~ 343 (834)
+......... . ........++.|+|||++..+ .++.++|||||||++|||+| |+.|+.....
T Consensus 154 ~~~~~~~~~~----------~---~~~~~~~~~~~y~~PE~~~~~-~~~~~~Dv~slG~il~ell~~g~~p~~~~~~--- 216 (268)
T cd05063 154 SRVLEDDPEG----------T---YTTSGGKIPIRWTAPEAIAYR-KFTSASDVWSFGIVMWEVMSFGERPYWDMSN--- 216 (268)
T ss_pred ceeccccccc----------c---eeccCCCcCceecCHHHhhcC-CcChHhHHHHHHHHHHHHHhCCCCCCCcCCH---
Confidence 8754321100 0 001112235679999988654 57899999999999999998 9999854321
Q ss_pred chHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhc
Q 003278 344 IILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSG 407 (834)
Q Consensus 344 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~ 407 (834)
..+...+.. +... +. .......+.+++..||+.+|++||+|.+|++.|..
T Consensus 217 ---~~~~~~i~~-~~~~----~~------~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~ 266 (268)
T cd05063 217 ---HEVMKAIND-GFRL----PA------PMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDK 266 (268)
T ss_pred ---HHHHHHHhc-CCCC----CC------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 112222211 1100 00 00112467899999999999999999999998865
No 176
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=7.8e-38 Score=331.60 Aligned_cols=242 Identities=25% Similarity=0.423 Sum_probs=190.0
Q ss_pred CeeeccCCeEEEEEEECCCCe-------EEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEc
Q 003278 117 EVLGSGGFGKVYRAVLPSDGT-------VVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDY 189 (834)
Q Consensus 117 ~~LG~G~fG~Vy~~~~~~~g~-------~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 189 (834)
+.||+|+||.||+|.....+. .||+|.+........+.|.+|+.+++.++|||||++++++..++..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 469999999999998865443 4888988665555667889999999999999999999999999999999999
Q ss_pred cCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCc--------eEEee
Q 003278 190 MPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYN--------ARLGD 261 (834)
Q Consensus 190 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~--------~kl~D 261 (834)
+++|+|..++.... ..++|..++.++.|++.||+|||+. +|+||||||+|||++.++. ++++|
T Consensus 81 ~~~g~L~~~l~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d 151 (258)
T cd05078 81 VKFGSLDTYLKKNK------NLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSD 151 (258)
T ss_pred CCCCcHHHHHhcCC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEecc
Confidence 99999999987542 2578999999999999999999985 9999999999999987765 58999
Q ss_pred ccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCC-ccCCCCCC
Q 003278 262 FGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGR-RAVDLTYP 340 (834)
Q Consensus 262 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~-~p~~~~~~ 340 (834)
||++..... .....|++.|+|||++..+..++.++|||||||++|||++|. .|+.....
T Consensus 152 ~g~~~~~~~--------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~ 211 (258)
T cd05078 152 PGISITVLP--------------------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDS 211 (258)
T ss_pred cccccccCC--------------------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccH
Confidence 998764211 123458899999999976556789999999999999999995 44432111
Q ss_pred CccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhh
Q 003278 341 DDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVS 406 (834)
Q Consensus 341 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~ 406 (834)
. .... .... .. .+. . .....+.+++..||+.+|++||++.++++.|+
T Consensus 212 ~------~~~~-~~~~--~~-----~~~-~----~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 212 Q------KKLQ-FYED--RH-----QLP-A----PKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred H------HHHH-HHHc--cc-----cCC-C----CCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 1 1111 1110 00 111 0 11245789999999999999999999998763
No 177
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=4.8e-37 Score=334.54 Aligned_cols=259 Identities=25% Similarity=0.372 Sum_probs=200.4
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc-ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEc
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDY 189 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 189 (834)
++|+..+.||+|+||.||++.+..+|..||+|.+... .......+.+|+.++.+++||||++++++|..++..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 4688999999999999999999889999999988644 233456788999999999999999999999999999999999
Q ss_pred cCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhh
Q 003278 190 MPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLE 269 (834)
Q Consensus 190 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~ 269 (834)
+++++|.+++... ..+++..+..++.|+++||.|||+. .+++||||||+|||++.++.+||+|||++..+.
T Consensus 81 ~~~~~L~~~l~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 151 (308)
T cd06615 81 MDGGSLDQVLKKA-------GRIPENILGKISIAVLRGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 151 (308)
T ss_pred cCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhh--CCEEECCCChHHEEEecCCcEEEccCCCccccc
Confidence 9999999998643 3578899999999999999999973 389999999999999999999999999986532
Q ss_pred hhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHH
Q 003278 270 HELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDW 349 (834)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~ 349 (834)
.. ......|++.|+|||.+.. ..++.++|||||||++|||+||+.|+...... .+..+
T Consensus 152 ~~------------------~~~~~~~~~~~~aPE~~~~-~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~---~~~~~ 209 (308)
T cd06615 152 DS------------------MANSFVGTRSYMSPERLQG-THYTVQSDIWSLGLSLVEMAIGRYPIPPPDAK---ELEAM 209 (308)
T ss_pred cc------------------ccccCCCCcCccChhHhcC-CCCCccchHHHHHHHHHHHHhCCCCCCCcchh---hHHHh
Confidence 11 0233468999999998754 46789999999999999999999998643211 11111
Q ss_pred HHHHhhcCcc---------------------------ccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHH
Q 003278 350 IRRLSDEGKV---------------------------LQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVI 402 (834)
Q Consensus 350 ~~~~~~~~~~---------------------------~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~ 402 (834)
.......... .....+.+.... ....+.+++.+||+.+|++||++.+|+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~li~~~l~~~P~~Rpt~~~ll 285 (308)
T cd06615 210 FGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGA----FSDEFQDFVDKCLKKNPKERADLKELT 285 (308)
T ss_pred hcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcc----cCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 1100000000 000000000000 113478999999999999999999998
Q ss_pred HH
Q 003278 403 EA 404 (834)
Q Consensus 403 ~~ 404 (834)
+.
T Consensus 286 ~~ 287 (308)
T cd06615 286 KH 287 (308)
T ss_pred cC
Confidence 75
No 178
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=5.9e-37 Score=342.26 Aligned_cols=263 Identities=21% Similarity=0.256 Sum_probs=200.4
Q ss_pred cHHHHHhhcCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc---ChhhHHHHHHHHHHHHhCCCCceeeEeeeEE
Q 003278 102 SYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK---GERFEKTFAAELVAVAHLRHRNLVRLRGWCV 178 (834)
Q Consensus 102 ~~~el~~~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~ 178 (834)
...++....++|+..+.||+|+||.||+|....+++.||+|++... .....+.+.+|+.++..++||||+++++++.
T Consensus 34 ~~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~ 113 (371)
T cd05622 34 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ 113 (371)
T ss_pred HHhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence 4555667778999999999999999999999999999999998642 1223456788999999999999999999999
Q ss_pred eCCEEEEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceE
Q 003278 179 HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNAR 258 (834)
Q Consensus 179 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~k 258 (834)
+.+..++||||+++|+|.+++... .++...+..++.|++.||+|||+. +|+||||||+|||++.++.+|
T Consensus 114 ~~~~~~lv~Ey~~gg~L~~~~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ik 182 (371)
T cd05622 114 DDRYLYMVMEYMPGGDLVNLMSNY--------DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLK 182 (371)
T ss_pred cCCEEEEEEcCCCCCcHHHHHHhc--------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEE
Confidence 999999999999999999988532 367788889999999999999985 999999999999999999999
Q ss_pred EeeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccC---CCCCcccceeehhhHHHHHHhCCccC
Q 003278 259 LGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKG---SVATAKSDVFSFGIVVLEVVSGRRAV 335 (834)
Q Consensus 259 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~---~~~~~ksDV~SfGvvl~ElltG~~p~ 335 (834)
|+|||+++.+.... ........||+.|||||++... ..++.++|||||||++|||++|+.||
T Consensus 183 L~DfG~a~~~~~~~---------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf 247 (371)
T cd05622 183 LADFGTCMKMNKEG---------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 247 (371)
T ss_pred EEeCCceeEcCcCC---------------cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCC
Confidence 99999997542210 0012345699999999998642 23688999999999999999999999
Q ss_pred CCCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCC--CCchhhHHHH
Q 003278 336 DLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHL--RPSMKWVIEA 404 (834)
Q Consensus 336 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~--RPsm~~V~~~ 404 (834)
..... ......+..........+. ... ...+..++..|+..++.+ ||++.++.+.
T Consensus 248 ~~~~~------~~~~~~i~~~~~~~~~~~~----~~~----s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 248 YADSL------VGTYSKIMNHKNSLTFPDD----NDI----SKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred CCCCH------HHHHHHHHcCCCcccCCCc----CCC----CHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 64321 1111222211111111111 111 134667888898743332 6777777764
No 179
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=3.8e-37 Score=328.57 Aligned_cols=255 Identities=24% Similarity=0.389 Sum_probs=199.6
Q ss_pred hhcCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhC-CCCceeeEeeeEEeC------
Q 003278 108 IGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHL-RHRNLVRLRGWCVHE------ 180 (834)
Q Consensus 108 ~~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~------ 180 (834)
.+++.|+..+.||+|+||.||+|....+++.||+|++.... .....+.+|+.++.++ +||||++++++|...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 45677888999999999999999998899999999986543 3345788999999998 799999999998763
Q ss_pred CEEEEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEe
Q 003278 181 DQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLG 260 (834)
Q Consensus 181 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~ 260 (834)
+..++||||+++|+|.+++.... ...++|..+..++.|++.||+|||+. +|+||||||+||++++++.+||+
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~-----~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~ 153 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTK-----GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLV 153 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhcc-----CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEc
Confidence 46899999999999999986532 24688999999999999999999985 99999999999999999999999
Q ss_pred eccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCcccccc----CCCCCcccceeehhhHHHHHHhCCccCC
Q 003278 261 DFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQK----GSVATAKSDVFSFGIVVLEVVSGRRAVD 336 (834)
Q Consensus 261 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~----~~~~~~ksDV~SfGvvl~ElltG~~p~~ 336 (834)
|||+++.+.... .......||+.|+|||++.. +..++.++|||||||++|||++|+.|+.
T Consensus 154 Dfg~~~~~~~~~----------------~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~ 217 (272)
T cd06637 154 DFGVSAQLDRTV----------------GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLC 217 (272)
T ss_pred cCCCceeccccc----------------ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 999987542210 11234569999999998852 2346889999999999999999999985
Q ss_pred CCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHH
Q 003278 337 LTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIE 403 (834)
Q Consensus 337 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~ 403 (834)
..... ..+.. .... ..+.+..... ...+.+++..||+.+|.+||++.+|++
T Consensus 218 ~~~~~-----~~~~~--~~~~-----~~~~~~~~~~----~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 218 DMHPM-----RALFL--IPRN-----PAPRLKSKKW----SKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred ccCHH-----HHHHH--HhcC-----CCCCCCCCCc----CHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 32211 11110 0111 1111111111 235788999999999999999999876
No 180
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=3.8e-37 Score=330.61 Aligned_cols=244 Identities=24% Similarity=0.308 Sum_probs=189.1
Q ss_pred eeccCCeEEEEEEECCCCeEEEEEEecccC---hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEccCCCCH
Q 003278 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSL 195 (834)
Q Consensus 119 LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 195 (834)
||+|+||+||+|....+|+.||||.+.... ....+.+..|+.++++++||||+++.+++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 799999999999998899999999986432 12335678899999999999999999999999999999999999999
Q ss_pred hHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhhhhh
Q 003278 196 DRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQ 275 (834)
Q Consensus 196 ~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~~ 275 (834)
..++..... ....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.+....
T Consensus 81 ~~~~~~~~~---~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~--- 151 (280)
T cd05608 81 RYHIYNVDE---ENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ--- 151 (280)
T ss_pred HHHHHhccc---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCC---
Confidence 988754321 234689999999999999999999985 99999999999999999999999999987542210
Q ss_pred hhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHHHHHhh
Q 003278 276 MRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIRRLSD 355 (834)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~~~~~~ 355 (834)
.......||+.|+|||.+... .++.++|||||||++|||+||+.||........ ..........
T Consensus 152 -------------~~~~~~~g~~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~ 215 (280)
T cd05608 152 -------------SKTKGYAGTPGFMAPELLQGE-EYDFSVDYFALGVTLYEMIAARGPFRARGEKVE--NKELKQRILN 215 (280)
T ss_pred -------------ccccccCCCcCccCHHHhcCC-CCCccccHHHHHHHHHHHHhCCCCCCCCCcchh--HHHHHHhhcc
Confidence 012335699999999998755 678999999999999999999999864322111 1111111110
Q ss_pred cCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchh
Q 003278 356 EGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMK 399 (834)
Q Consensus 356 ~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~ 399 (834)
. .. .+.......+.+++..||+.||++||++.
T Consensus 216 -~--------~~---~~~~~~~~~~~~li~~~l~~~P~~R~~~~ 247 (280)
T cd05608 216 -D--------SV---TYPDKFSPASKSFCEALLAKDPEKRLGFR 247 (280)
T ss_pred -c--------CC---CCcccCCHHHHHHHHHHhcCCHHHhcCCC
Confidence 0 00 00111124577899999999999999553
No 181
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=2.2e-37 Score=326.64 Aligned_cols=249 Identities=25% Similarity=0.387 Sum_probs=194.3
Q ss_pred CeeeccCCeEEEEEEECCCCeEEEEEEeccc-ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEccCCCCH
Q 003278 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSL 195 (834)
Q Consensus 117 ~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 195 (834)
+.||+|+||.||+|.+..+|+.||+|.+... .......|.+|+.++++++||||++++++|...+..++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 4699999999999999889999999987643 234556799999999999999999999999999999999999999999
Q ss_pred hHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhhhhh
Q 003278 196 DRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQ 275 (834)
Q Consensus 196 ~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~~ 275 (834)
.+++... ...++|..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 81 ~~~~~~~------~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~-- 149 (252)
T cd05084 81 LTFLRTE------GPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVY-- 149 (252)
T ss_pred HHHHHhC------CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccccc--
Confidence 9998643 23588999999999999999999985 999999999999999999999999999875322100
Q ss_pred hhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCccchHHHHHHHHh
Q 003278 276 MRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQIILLDWIRRLS 354 (834)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~~l~~~~~~~~ 354 (834)
........++..|+|||.+..+ .++.++|||||||++|||++ |..|+...... . .....
T Consensus 150 ------------~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~---~----~~~~~ 209 (252)
T cd05084 150 ------------ASTGGMKQIPVKWTAPEALNYG-RYSSESDVWSFGILLWEAFSLGAVPYANLSNQ---Q----TREAI 209 (252)
T ss_pred ------------cccCCCCCCceeecCchhhcCC-CCChHHHHHHHHHHHHHHHhCCCCCccccCHH---H----HHHHH
Confidence 0000111235679999998665 57889999999999999998 88777532211 1 11111
Q ss_pred hcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhh
Q 003278 355 DEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVS 406 (834)
Q Consensus 355 ~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~ 406 (834)
..+.... ........+.+++..|++.+|++||++.+|.++|.
T Consensus 210 ~~~~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 210 EQGVRLP----------CPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HcCCCCC----------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 1111000 00111246788999999999999999999999875
No 182
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=4e-37 Score=327.11 Aligned_cols=241 Identities=22% Similarity=0.380 Sum_probs=188.8
Q ss_pred CeeeccCCeEEEEEEECCC------------CeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEE
Q 003278 117 EVLGSGGFGKVYRAVLPSD------------GTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLL 184 (834)
Q Consensus 117 ~~LG~G~fG~Vy~~~~~~~------------g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~ 184 (834)
+.||+|+||.||+|.+..+ ...||+|.+..........|.+|+.++..++||||++++++|......+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 4689999999999986322 2368999887665556678899999999999999999999999999999
Q ss_pred EEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCc-------e
Q 003278 185 LVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYN-------A 257 (834)
Q Consensus 185 lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~-------~ 257 (834)
+||||+++|+|..++... ..++++..+..|+.|+++||+|||+. +|+||||||+|||++.++. +
T Consensus 81 lv~e~~~~~~l~~~~~~~------~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~ 151 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRK------SDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFI 151 (262)
T ss_pred EEEecccCCCHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCcee
Confidence 999999999999888643 24589999999999999999999985 9999999999999987654 8
Q ss_pred EEeeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHH-hCCccCC
Q 003278 258 RLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVV-SGRRAVD 336 (834)
Q Consensus 258 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ell-tG~~p~~ 336 (834)
|++|||++..... .....||..|+|||++..+..++.++|||||||++|||+ +|+.|+.
T Consensus 152 ~l~d~g~~~~~~~--------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~ 211 (262)
T cd05077 152 KLSDPGIPITVLS--------------------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLK 211 (262)
T ss_pred EeCCCCCCccccC--------------------cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 9999999864321 122347889999998875567899999999999999998 5777764
Q ss_pred CCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHh
Q 003278 337 LTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAV 405 (834)
Q Consensus 337 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l 405 (834)
.....+ . ..... +.. . .. . .....+.+|+..||+.||.+||++.++++.|
T Consensus 212 ~~~~~~----~---~~~~~-~~~-~-----~~-~----~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 212 DKTLAE----K---ERFYE-GQC-M-----LV-T----PSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred CcchhH----H---HHHHh-cCc-c-----CC-C----CChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 321111 0 01111 110 0 00 0 0124578899999999999999999999876
No 183
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=6e-37 Score=349.40 Aligned_cols=276 Identities=24% Similarity=0.280 Sum_probs=212.4
Q ss_pred HHhhcCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCC-CCceeeEeee-EEeC---
Q 003278 106 LYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLR-HRNLVRLRGW-CVHE--- 180 (834)
Q Consensus 106 l~~~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~g~-~~~~--- 180 (834)
+.++..+.++.++|.+|||+.||.|.....|..||+|++-..++...+...+||.+|++|. |||||.+++. ....
T Consensus 32 ~~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~ 111 (738)
T KOG1989|consen 32 FTVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSN 111 (738)
T ss_pred EEECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCC
Confidence 4566778888999999999999999997777999999987777888889999999999997 9999999993 2221
Q ss_pred ---CEEEEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCce
Q 003278 181 ---DQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNA 257 (834)
Q Consensus 181 ---~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~ 257 (834)
-+.+|.||||.+|+|-+++..+.. ..|++.++++|+.|+++|+++||.. .++|||||||-+||||+.+++.
T Consensus 112 ~~~~EvllLmEyC~gg~Lvd~mn~Rlq-----~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~ 185 (738)
T KOG1989|consen 112 NGVWEVLLLMEYCKGGSLVDFMNTRLQ-----TRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNY 185 (738)
T ss_pred CceeEEEeehhhccCCcHHHHHHHHHh-----ccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCE
Confidence 268999999999999999976532 3499999999999999999999984 7899999999999999999999
Q ss_pred EEeeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccc--cCCCCCcccceeehhhHHHHHHhCCccC
Q 003278 258 RLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQ--KGSVATAKSDVFSFGIVVLEVVSGRRAV 335 (834)
Q Consensus 258 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~--~~~~~~~ksDV~SfGvvl~ElltG~~p~ 335 (834)
||||||.|...-..... . .....+...-...-|+-|+|||.+. .+...+.|+|||+|||+||-|+....||
T Consensus 186 KLCDFGSatt~~~~~~~----~---~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PF 258 (738)
T KOG1989|consen 186 KLCDFGSATTKILSPTS----A---QEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPF 258 (738)
T ss_pred EeCcccccccccCCCcc----H---HHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCc
Confidence 99999998642111100 0 0000000011123589999999864 4667899999999999999999999999
Q ss_pred CCCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcCCCCCCC
Q 003278 336 DLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGSYSGKLP 414 (834)
Q Consensus 336 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~~~~~~p 414 (834)
+.... +.+++....-+.+ ..--..+..|+..||+.||.+||++-+|++.+......+.|
T Consensus 259 e~sg~-------------------laIlng~Y~~P~~-p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~ 317 (738)
T KOG1989|consen 259 EESGK-------------------LAILNGNYSFPPF-PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPCP 317 (738)
T ss_pred CcCcc-------------------eeEEeccccCCCC-ccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCC
Confidence 74311 1111111110111 11235788999999999999999999999998776555544
No 184
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=2.7e-37 Score=339.45 Aligned_cols=242 Identities=18% Similarity=0.227 Sum_probs=190.0
Q ss_pred CcccccCCcEEEEEEE-CCCcEEEEEEecCCC--ChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEeccCCC
Q 003278 519 QRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSK--CPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATR 595 (834)
Q Consensus 519 ~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~~g 595 (834)
+.||+|+||.||++.. .++..||||.+.... .......+.+|+.+|++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 3589999999999985 468899999986432 2233467889999999999999999999999999999999999999
Q ss_pred chhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCCC
Q 003278 596 ILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHG 675 (834)
Q Consensus 596 ~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~~ 675 (834)
+|..++.... .+++.....++.|++.||+|||+ .+|+||||||+||||+.++.+||+|||+++......
T Consensus 81 ~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~-- 149 (328)
T cd05593 81 ELFFHLSRER------VFSEDRTRFYGAEIVSALDYLHS---GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA-- 149 (328)
T ss_pred CHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeEECCCCcEEEecCcCCccCCCcc--
Confidence 9988875432 47888899999999999999996 699999999999999999999999999987532211
Q ss_pred CcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCcccccccc
Q 003278 676 HRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDL 755 (834)
Q Consensus 676 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 755 (834)
......+||+.|||||++.+..++.++|||||||++|||+||+.||........ ... .... +.
T Consensus 150 -----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~-~~~---~~~~--------~~ 212 (328)
T cd05593 150 -----ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL-FEL---ILME--------DI 212 (328)
T ss_pred -----cccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHH-HHH---hccC--------Cc
Confidence 112346799999999999989999999999999999999999999864332211 111 1000 01
Q ss_pred ccCCCCCHHHHHHHHHHHHHhccCCCCCCC-----ChhHHHH
Q 003278 756 SLNGEYNHKELMRLIKLGIACTLSNPELRP-----SMRQILS 792 (834)
Q Consensus 756 ~l~~~~~~~~~~~l~~l~~~C~~~~P~~RP-----tm~~v~~ 792 (834)
.++...+ .+ +.++..+||+.||++|| ++.++++
T Consensus 213 ~~p~~~~-~~---~~~li~~~L~~dP~~R~~~~~~~~~~il~ 250 (328)
T cd05593 213 KFPRTLS-AD---AKSLLSGLLIKDPNKRLGGGPDDAKEIMR 250 (328)
T ss_pred cCCCCCC-HH---HHHHHHHHcCCCHHHcCCCCCCCHHHHhc
Confidence 1111222 23 44555689999999997 7888875
No 185
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=2e-37 Score=339.74 Aligned_cols=241 Identities=18% Similarity=0.219 Sum_probs=188.8
Q ss_pred cccccCCcEEEEEEE-CCCcEEEEEEecCCC--ChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEeccCCCc
Q 003278 520 RVAEMDFGTAYQGFL-DNHQYVLVKRLGMSK--CPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRI 596 (834)
Q Consensus 520 ~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~~g~ 596 (834)
.||+|+||.||++.. .++..||+|.+.... .......+.+|+.++++++||||+++++++...+..++||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~ 81 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCc
Confidence 589999999999985 468899999986432 22334567889999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCCCC
Q 003278 597 LSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGH 676 (834)
Q Consensus 597 L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~~~ 676 (834)
|..++.... .+++.....++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 82 L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~--- 149 (323)
T cd05595 82 LFFHLSRER------VFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--- 149 (323)
T ss_pred HHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEEcCCCCEEecccHHhccccCCC---
Confidence 988875432 37888899999999999999996 699999999999999999999999999987532211
Q ss_pred cccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCccccccccc
Q 003278 677 RKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLS 756 (834)
Q Consensus 677 ~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 756 (834)
.......||+.|||||++.++.++.++|||||||++|||+||+.||......... .. ...... .
T Consensus 150 ----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~-~~---~~~~~~--------~ 213 (323)
T cd05595 150 ----ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF-EL---ILMEEI--------R 213 (323)
T ss_pred ----CccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHH-HH---HhcCCC--------C
Confidence 1123467999999999999999999999999999999999999998643322111 11 111110 1
Q ss_pred cCCCCCHHHHHHHHHHHHHhccCCCCCCC-----ChhHHHH
Q 003278 757 LNGEYNHKELMRLIKLGIACTLSNPELRP-----SMRQILS 792 (834)
Q Consensus 757 l~~~~~~~~~~~l~~l~~~C~~~~P~~RP-----tm~~v~~ 792 (834)
++...+ +++ .++..+||+.||++|| ++.++++
T Consensus 214 ~p~~~~-~~~---~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 214 FPRTLS-PEA---KSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred CCCCCC-HHH---HHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 111222 333 3455589999999998 7777764
No 186
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=3.8e-37 Score=326.58 Aligned_cols=255 Identities=25% Similarity=0.393 Sum_probs=201.2
Q ss_pred cCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEc
Q 003278 110 SNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDY 189 (834)
Q Consensus 110 t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 189 (834)
.++|+..++||+|+||.||+|.. .++..||+|.+.... ...+.+.+|+.++++++|+||+++++++...+..++||||
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~-~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYY-NNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEY 82 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEe-cCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEec
Confidence 35688899999999999999997 567789999876532 2356789999999999999999999999999999999999
Q ss_pred cCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhh
Q 003278 190 MPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLE 269 (834)
Q Consensus 190 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~ 269 (834)
+++|+|.+++.... ...+++..++.++.|+++||+|||+. +++||||||+|||++.++.+||+|||+++...
T Consensus 83 ~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~ 154 (261)
T cd05072 83 MAKGSLLDFLKSDE-----GGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIE 154 (261)
T ss_pred CCCCcHHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecC
Confidence 99999999986532 24688999999999999999999985 99999999999999999999999999997543
Q ss_pred hhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCccchHHH
Q 003278 270 HELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQIILLD 348 (834)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~~l~~ 348 (834)
.... .......++..|+|||++..+ .++.++|||||||++|||+| |+.|+.... ......
T Consensus 155 ~~~~---------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~~l~t~g~~p~~~~~---~~~~~~ 215 (261)
T cd05072 155 DNEY---------------TAREGAKFPIKWTAPEAINFG-SFTIKSDVWSFGILLYEIVTYGKIPYPGMS---NSDVMS 215 (261)
T ss_pred CCce---------------eccCCCccceecCCHHHhccC-CCChhhhhhhhHHHHHHHHccCCCCCCCCC---HHHHHH
Confidence 2100 001223467889999988654 57889999999999999999 888885321 111222
Q ss_pred HHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhc
Q 003278 349 WIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSG 407 (834)
Q Consensus 349 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~ 407 (834)
++. .+... +.. ... ...+.+++..|++.+|++||++.++.+.|+.
T Consensus 216 ~~~----~~~~~----~~~--~~~----~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 216 ALQ----RGYRM----PRM--ENC----PDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred HHH----cCCCC----CCC--CCC----CHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 211 11110 000 111 2457889999999999999999999998864
No 187
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1e-36 Score=329.50 Aligned_cols=267 Identities=20% Similarity=0.285 Sum_probs=202.1
Q ss_pred hCcCcCCcccccCCcEEEEEEECC-----------------CcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLDN-----------------HQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQL 575 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~~-----------------~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l 575 (834)
+.|...+.||+|+||.||++...+ ...||+|.+.........+.|.+|++++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~ 84 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL 84 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 456777899999999999988543 245899998766655666789999999999999999999
Q ss_pred EEEEeeCCeEEEEEeccCCCchhhhhhcCCCC-----CCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCce
Q 003278 576 CGWCTEQGEMLVIYDYSATRILSHLLFHNNHR-----IGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAI 650 (834)
Q Consensus 576 ~g~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~-----~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NI 650 (834)
+++|...+..+++|||+++++|..++...... .....+++...+.++.|++.||+|||+ .+|+||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~---~~i~H~dlkp~Ni 161 (296)
T cd05051 85 LGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES---LNFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHH---cCccccccchhce
Confidence 99999999999999999999999998754311 112258899999999999999999996 6899999999999
Q ss_pred eecCCCCceEeeeeeccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh--CCCccCC
Q 003278 651 TLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT--GQMAVDF 728 (834)
Q Consensus 651 Lld~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t--G~~p~~~ 728 (834)
++++++.+|++|||+++.+...+.. .......+|+.|||||++.++.++.++|||||||++|||+| |..|+..
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~ 236 (296)
T cd05051 162 LVGKNYTIKIADFGMSRNLYSSDYY-----RVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEH 236 (296)
T ss_pred eecCCCceEEccccceeecccCcce-----eecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCC
Confidence 9999999999999999765332210 11223456789999999998899999999999999999998 5566643
Q ss_pred CCCchhHHHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHc
Q 003278 729 RLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795 (834)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~ 795 (834)
.. ....................... ... .+ .++.+++.+||+.||++|||+.+|++.|+
T Consensus 237 ~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~---~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 237 LT-DQQVIENAGHFFRDDGRQIYLPR---PPN-CP---KDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred cC-hHHHHHHHHhccccccccccCCC---ccC-CC---HHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 22 22222222211100000000000 011 11 35667778999999999999999999885
No 188
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=5.5e-37 Score=333.21 Aligned_cols=265 Identities=16% Similarity=0.208 Sum_probs=192.4
Q ss_pred hhCcCcCCcccccCCcEEEEEEEC-CCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEe
Q 003278 512 TNNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYD 590 (834)
Q Consensus 512 t~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~E 590 (834)
.++|...+.||+|+||.||+|... ++..||||.+...........+.+|+.++++++|||||++++++.+....++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 357888899999999999999975 6789999998754433333467889999999999999999999999999999999
Q ss_pred ccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccc
Q 003278 591 YSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLT 670 (834)
Q Consensus 591 y~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~ 670 (834)
|++ ++|.+++.... ..+++.....++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++...
T Consensus 84 ~~~-~~l~~~~~~~~-----~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 154 (303)
T cd07869 84 YVH-TDLCQYMDKHP-----GGLHPENVKLFLFQLLRGLSYIHQ---RYILHRDLKPQNLLISDTGELKLADFGLARAKS 154 (303)
T ss_pred CCC-cCHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECCCCcceecc
Confidence 996 56666665432 236778888999999999999996 689999999999999999999999999987532
Q ss_pred cCCCCCcccccCccccccccCccchhcccc-CCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhc--C
Q 003278 671 RNDHGHRKATSGNRSVRGIFGYMSPEYIES-GEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARK--R 747 (834)
Q Consensus 671 ~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~--~ 747 (834)
... .......||+.|||||++.+ ..++.++|||||||++|||+||+.||.................... .
T Consensus 155 ~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 227 (303)
T cd07869 155 VPS-------HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNED 227 (303)
T ss_pred CCC-------ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChh
Confidence 211 11123468999999999865 4578899999999999999999999975433222222221110000 0
Q ss_pred cccc-----ccccc-c--CCCCCHH-------HHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 748 PLAE-----LVDLS-L--NGEYNHK-------ELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 748 ~~~~-----~~d~~-l--~~~~~~~-------~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
.+.. ..++. . ....... ....+.+++..|++.||++|||+.++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 228 TWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred hccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 0000 00000 0 0000000 0123445666899999999999999985
No 189
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=3.2e-37 Score=328.22 Aligned_cols=261 Identities=23% Similarity=0.377 Sum_probs=205.3
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc---ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK---GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVY 187 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 187 (834)
++|+..+.||+|+||.||+|....+|..||||.+... .......|.+|+.+++.++||||+++++++..++..++||
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4688889999999999999999889999999987542 2334567899999999999999999999999999999999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhh
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARW 267 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 267 (834)
||+++++|.+++..... ....++|..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++..
T Consensus 82 e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~ 155 (267)
T cd08229 82 ELADAGDLSRMIKHFKK---QKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRF 155 (267)
T ss_pred EecCCCCHHHHHHHhhc---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhc
Confidence 99999999998864321 234689999999999999999999985 999999999999999999999999999875
Q ss_pred hhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHH
Q 003278 268 LEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347 (834)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~ 347 (834)
+.... .......|+..|+|||++... .++.++|||||||++|||++|..|+.....+ ..
T Consensus 156 ~~~~~----------------~~~~~~~~~~~~~ape~~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~ 214 (267)
T cd08229 156 FSSKT----------------TAAHSLVGTPYYMSPERIHEN-GYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LY 214 (267)
T ss_pred cccCC----------------cccccccCCcCccCHHHhcCC-CccchhhHHHHHHHHHHHHhCCCCcccccch----HH
Confidence 43210 001234589999999988654 5788999999999999999999998532211 11
Q ss_pred HHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcC
Q 003278 348 DWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGS 408 (834)
Q Consensus 348 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~ 408 (834)
.+..... ....+.+... .....+.+++..||+.+|.+||+|.+|++.+...
T Consensus 215 ~~~~~~~------~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 215 SLCKKIE------QCDYPPLPSD----HYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred HHhhhhh------cCCCCCCCcc----cccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 1111111 1111111111 1224678899999999999999999999988654
No 190
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=3.3e-37 Score=333.06 Aligned_cols=262 Identities=23% Similarity=0.298 Sum_probs=201.8
Q ss_pred hCcCcCCcccccCCcEEEEEEECC------CcEEEEEEecCCCChhHHHHHHHHHHHHHhc-cCCCceeEEEEEeeCCeE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLDN------HQYVLVKRLGMSKCPALRTRFSNELQNLARL-RHRNLVQLCGWCTEQGEM 585 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~~------~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l-~HpNiv~l~g~~~~~~~~ 585 (834)
++|...+.||+|+||.||+|...+ ...+|+|.+...........+.+|+.++.++ +||||++++++|...+..
T Consensus 12 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~ 91 (293)
T cd05053 12 DRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPL 91 (293)
T ss_pred hHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCe
Confidence 456777889999999999998642 3579999987655544556789999999999 899999999999999999
Q ss_pred EEEEeccCCCchhhhhhcCCC----------CCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCC
Q 003278 586 LVIYDYSATRILSHLLFHNNH----------RIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPD 655 (834)
Q Consensus 586 ~lv~Ey~~~g~L~~~l~~~~~----------~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~ 655 (834)
+++|||+++|+|..++..... ......++|..++.++.|++.||+|||+ .+|+||||||+|||++++
T Consensus 92 ~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~Nil~~~~ 168 (293)
T cd05053 92 YVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS---KKCIHRDLAARNVLVTED 168 (293)
T ss_pred EEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCccccccceeeEEEcCC
Confidence 999999999999999865321 0122358899999999999999999996 699999999999999999
Q ss_pred CCceEeeeeeccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchh
Q 003278 656 MNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGL 734 (834)
Q Consensus 656 ~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~ 734 (834)
+.+|++|||+++.+...... .......++..|+|||++.+..++.++|||||||++|||++ |..|+...... .
T Consensus 169 ~~~kL~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-~ 242 (293)
T cd05053 169 HVMKIADFGLARDIHHIDYY-----RKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE-E 242 (293)
T ss_pred CeEEeCccccccccccccce-----eccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHH-H
Confidence 99999999999865432210 01112245678999999988899999999999999999998 88887543222 1
Q ss_pred HHHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccC
Q 003278 735 LVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGN 797 (834)
Q Consensus 735 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~ 797 (834)
+..... ....+ ..... ....+.+++.+||..||++||||.+|++.|+.+
T Consensus 243 ~~~~~~---~~~~~-------~~~~~----~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~ 291 (293)
T cd05053 243 LFKLLK---EGYRM-------EKPQN----CTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM 291 (293)
T ss_pred HHHHHH---cCCcC-------CCCCC----CCHHHHHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence 111111 11100 00111 123466777899999999999999999999764
No 191
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=3.9e-37 Score=345.38 Aligned_cols=260 Identities=21% Similarity=0.253 Sum_probs=193.7
Q ss_pred CcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCC--ChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEe
Q 003278 514 NFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSK--CPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYD 590 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~E 590 (834)
.|...+.||+|+||+||+|.. .++..||||++.... .......+.+|+.+|.+++|||||++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 567778999999999999985 557899999986432 22334678999999999999999999999999999999999
Q ss_pred ccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccc
Q 003278 591 YSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLT 670 (834)
Q Consensus 591 y~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~ 670 (834)
|+++|+|.+++.... .+++.....++.|++.||+|||+ .+|+||||||+||||+.++.+||+|||+++.+.
T Consensus 82 ~~~gg~L~~~l~~~~------~~~e~~~~~~~~qi~~aL~~LH~---~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~ 152 (381)
T cd05626 82 YIPGGDMMSLLIRME------VFPEVLARFYIAELTLAIESVHK---MGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFR 152 (381)
T ss_pred cCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCcHHHEEECCCCCEEEeeCcCCcccc
Confidence 999999999986532 36777778899999999999996 699999999999999999999999999986432
Q ss_pred cCCCCCc----------------------------------------ccccCccccccccCccchhccccCCCCccCcch
Q 003278 671 RNDHGHR----------------------------------------KATSGNRSVRGIFGYMSPEYIESGEATSMADVY 710 (834)
Q Consensus 671 ~~~~~~~----------------------------------------~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~ 710 (834)
....... .......+.+||+.|||||++.+..++.++|||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~Diw 232 (381)
T cd05626 153 WTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWW 232 (381)
T ss_pred cccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCcccee
Confidence 1100000 000011246799999999999988999999999
Q ss_pred hhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHH
Q 003278 711 SFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQI 790 (834)
Q Consensus 711 SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v 790 (834)
||||++|||+||+.||....+...... ...+ .... .+ + .....+ .++..++.- +.|+..+|..||++.+|
T Consensus 233 SlG~il~elltG~~Pf~~~~~~~~~~~-i~~~---~~~~-~~--~-~~~~~s-~~~~dli~~-ll~~~~~~~~R~~~~~~ 302 (381)
T cd05626 233 SVGVILFEMLVGQPPFLAPTPTETQLK-VINW---ENTL-HI--P-PQVKLS-PEAVDLITK-LCCSAEERLGRNGADDI 302 (381)
T ss_pred ehhhHHHHHHhCCCCCcCCCHHHHHHH-HHcc---cccc-CC--C-CCCCCC-HHHHHHHHH-HccCcccccCCCCHHHH
Confidence 999999999999999975443322111 1110 0000 00 0 001122 344444432 23777788889999999
Q ss_pred HH
Q 003278 791 LS 792 (834)
Q Consensus 791 ~~ 792 (834)
+.
T Consensus 303 l~ 304 (381)
T cd05626 303 KA 304 (381)
T ss_pred hc
Confidence 85
No 192
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=2.3e-37 Score=338.14 Aligned_cols=241 Identities=22% Similarity=0.299 Sum_probs=188.7
Q ss_pred CeeeccCCeEEEEEEECCCCeEEEEEEecccC---hhhHHHHHHHHHHHHh-CCCCceeeEeeeEEeCCEEEEEEEccCC
Q 003278 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAELVAVAH-LRHRNLVRLRGWCVHEDQLLLVYDYMPN 192 (834)
Q Consensus 117 ~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~-l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 192 (834)
+.||+|+||+||+|.+..+++.||||.+.... ....+.+..|..++.. ++||||+++++++.+.+.+++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999998889999999986531 2234456677888775 5999999999999999999999999999
Q ss_pred CCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhh
Q 003278 193 RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHEL 272 (834)
Q Consensus 193 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~ 272 (834)
|+|..++... ..+++.....++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 81 g~L~~~l~~~-------~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~- 149 (316)
T cd05619 81 GDLMFHIQSC-------HKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLG- 149 (316)
T ss_pred CcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCC-
Confidence 9999988542 3588899999999999999999985 9999999999999999999999999998632110
Q ss_pred hhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHHHH
Q 003278 273 QYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIRR 352 (834)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~~~ 352 (834)
........||+.|+|||.+... .++.++|||||||++|||+||+.||..... ..+...+.
T Consensus 150 ---------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~G~~pf~~~~~---~~~~~~i~- 209 (316)
T cd05619 150 ---------------DAKTCTFCGTPDYIAPEILLGQ-KYNTSVDWWSFGVLLYEMLIGQSPFHGHDE---EELFQSIR- 209 (316)
T ss_pred ---------------CCceeeecCCccccCHHHHcCC-CCCchhhhhhHHHHHHHHHhCCCCCCCCCH---HHHHHHHH-
Confidence 0113445799999999998654 679999999999999999999999864321 11111111
Q ss_pred HhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchh-hHH
Q 003278 353 LSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMK-WVI 402 (834)
Q Consensus 353 ~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~-~V~ 402 (834)
.+. +... ... ...+.++...||+.||.+||++. ++.
T Consensus 210 ---~~~------~~~~-~~~----~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 210 ---MDN------PCYP-RWL----TREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred ---hCC------CCCC-ccC----CHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 110 1111 111 13467889999999999999997 443
No 193
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=4.2e-37 Score=337.48 Aligned_cols=242 Identities=24% Similarity=0.283 Sum_probs=191.2
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc---ChhhHHHHHHHHHHHHhCCCC-ceeeEeeeEEeCCEEEEEE
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK---GERFEKTFAAELVAVAHLRHR-NLVRLRGWCVHEDQLLLVY 187 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~-nIv~l~g~~~~~~~~~lV~ 187 (834)
+|+..+.||+|+||.||+|....+++.||||++... .....+.+..|+.++..++|+ +|+++++++...+.+|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 477889999999999999999888999999998643 223446678899999999765 5888999999999999999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhh
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARW 267 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 267 (834)
||+++|+|..++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 81 E~~~~g~L~~~~~~~-------~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~ 150 (324)
T cd05587 81 EYVNGGDLMYHIQQV-------GKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKE 150 (324)
T ss_pred cCCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCccee
Confidence 999999999888543 3578999999999999999999985 999999999999999999999999999863
Q ss_pred hhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHH
Q 003278 268 LEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347 (834)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~ 347 (834)
.... ........||+.|+|||++... .++.++|||||||++|||+||+.||...... .+.
T Consensus 151 ~~~~----------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~elltG~~pf~~~~~~---~~~ 210 (324)
T cd05587 151 NIFG----------------GKTTRTFCGTPDYIAPEIIAYQ-PYGKSVDWWAFGVLLYEMLAGQPPFDGEDED---ELF 210 (324)
T ss_pred cCCC----------------CCceeeecCCccccChhhhcCC-CCCcccchhhhHHHHHHHHhCCCCCCCCCHH---HHH
Confidence 2110 0112345799999999998654 5789999999999999999999998643211 111
Q ss_pred HHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCch
Q 003278 348 DWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSM 398 (834)
Q Consensus 348 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm 398 (834)
..+ . ... ..+. ... ...+.+++..||+.||.+||+.
T Consensus 211 ~~i---~-~~~------~~~~-~~~----~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 211 QSI---M-EHN------VSYP-KSL----SKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred HHH---H-cCC------CCCC-CCC----CHHHHHHHHHHhhcCHHHcCCC
Confidence 111 1 111 0111 111 1357789999999999999987
No 194
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=3.7e-37 Score=332.55 Aligned_cols=263 Identities=26% Similarity=0.417 Sum_probs=205.0
Q ss_pred CCCCCCCeeeccCCeEEEEEEEC-----CCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLP-----SDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLL 185 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~-----~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 185 (834)
.+|...+.||+|+||.||+|... .++..+|+|.+........+.|.+|+.++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 35777889999999999999853 3456799999876666666789999999999999999999999999999999
Q ss_pred EEEccCCCCHhHHHhcCCCc---------cccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCc
Q 003278 186 VYDYMPNRSLDRVLFRRPEN---------LEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYN 256 (834)
Q Consensus 186 V~Ey~~~gsL~~~l~~~~~~---------~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~ 256 (834)
||||+++++|.+++...... ......++|..++.++.|++.||+|||+. +|+||||||+|||++.++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCc
Confidence 99999999999999754211 01123589999999999999999999985 9999999999999999999
Q ss_pred eEEeeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccC
Q 003278 257 ARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAV 335 (834)
Q Consensus 257 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~ 335 (834)
+||+|||+++....... ....+...|+..|+|||++... .++.++|||||||++|||+| |+.|+
T Consensus 162 ~~l~dfg~a~~~~~~~~--------------~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~el~t~g~~p~ 226 (291)
T cd05094 162 VKIGDFGMSRDVYSTDY--------------YRVGGHTMLPIRWMPPESIMYR-KFTTESDVWSFGVILWEIFTYGKQPW 226 (291)
T ss_pred EEECCCCcccccCCCce--------------eecCCCCCcceeecChHHhccC-CCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 99999999975422110 0011233478899999988654 67889999999999999999 99887
Q ss_pred CCCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcC
Q 003278 336 DLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGS 408 (834)
Q Consensus 336 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~ 408 (834)
...... ..... ...+...... . .....+.+++.+||+.+|.+||++.+|++.|...
T Consensus 227 ~~~~~~---~~~~~----~~~~~~~~~~------~----~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~ 282 (291)
T cd05094 227 FQLSNT---EVIEC----ITQGRVLERP------R----VCPKEVYDIMLGCWQREPQQRLNIKEIYKILHAL 282 (291)
T ss_pred CCCCHH---HHHHH----HhCCCCCCCC------c----cCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 543221 11111 1122211110 0 1124578999999999999999999999999765
No 195
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6e-38 Score=324.67 Aligned_cols=261 Identities=25% Similarity=0.283 Sum_probs=194.3
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCC-----EEEEE
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHED-----QLLLV 186 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~-----~~~lV 186 (834)
.|...+++|.|+||.||+|...+++..||||+.-.... --.+|+.+|+.+.|||||+|.-+|.... .+.||
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 35667899999999999999999999999998644321 1236899999999999999998887543 24689
Q ss_pred EEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCC-CceEEeeccch
Q 003278 187 YDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQ-YNARLGDFGLA 265 (834)
Q Consensus 187 ~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~-~~~kl~DFGla 265 (834)
|||||. +|.+.+.... .....++...++-++.|+.+||+|||+. +|+||||||+|||+|.+ +.+||||||.|
T Consensus 101 leymP~-tL~~~~r~~~---~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSA 173 (364)
T KOG0658|consen 101 LEYMPE-TLYRVIRHYT---RANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSA 173 (364)
T ss_pred HHhchH-HHHHHHHHHh---hcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcc
Confidence 999986 8888886421 1123455567788999999999999995 99999999999999965 89999999999
Q ss_pred hhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccch
Q 003278 266 RWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII 345 (834)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~ 345 (834)
+.+..+. ...+...|..|.|||.+.....|+.+.||||.|||+.||+-|++-|......++..
T Consensus 174 K~L~~~e-----------------pniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~ 236 (364)
T KOG0658|consen 174 KVLVKGE-----------------PNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLV 236 (364)
T ss_pred eeeccCC-----------------CceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHH
Confidence 9765331 12345578999999999988899999999999999999999999887654443322
Q ss_pred HHHHHHHHhh----------cCccccccccccCCCC----CCHHHHHHHHHHHHHhcccCCCCCCchhhHHH
Q 003278 346 LLDWIRRLSD----------EGKVLQAGDNRLSDGS----YKLCDMEHLTHLALLCTLHNPHLRPSMKWVIE 403 (834)
Q Consensus 346 l~~~~~~~~~----------~~~~~~~~d~~l~~~~----~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~ 403 (834)
+ .++ ++. ..+..+...+.+.... +........+++...+++.+|.+|-+..|++.
T Consensus 237 e--Iik-~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 237 E--IIK-VLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred H--HHH-HhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 2 111 111 0111122222222211 11112235678999999999999999988875
No 196
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=5.1e-37 Score=323.31 Aligned_cols=247 Identities=19% Similarity=0.278 Sum_probs=195.6
Q ss_pred cccccCCcEEEEEEECCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEeccCCCchhh
Q 003278 520 RVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILSH 599 (834)
Q Consensus 520 ~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 599 (834)
.||+|+||.||+|...++..+|+|.+...........|.+|++++++++||||++++++|...+..++||||+++++|.+
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 81 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLS 81 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHH
Confidence 58999999999999888899999998765555555679999999999999999999999999999999999999999999
Q ss_pred hhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCCCCccc
Q 003278 600 LLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKA 679 (834)
Q Consensus 600 ~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~ 679 (834)
++.... ..++|..++.++.|++.||.|||+ .+++||||||+||++++++.+|++|||++........
T Consensus 82 ~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~----- 148 (250)
T cd05085 82 FLRKKK-----DELKTKQLVKFALDAAAGMAYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY----- 148 (250)
T ss_pred HHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccChheEEEcCCCeEEECCCccceecccccc-----
Confidence 886432 237899999999999999999996 6999999999999999999999999999875432111
Q ss_pred ccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcCccccccccccC
Q 003278 680 TSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSLN 758 (834)
Q Consensus 680 ~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 758 (834)
.......++..|+|||++.++.++.++|||||||++|||+| |..|+....... ..... .. .... ...
T Consensus 149 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~-~~~~~---~~--~~~~-----~~~ 216 (250)
T cd05085 149 -SSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ-AREQV---EK--GYRM-----SCP 216 (250)
T ss_pred -ccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH-HHHHH---Hc--CCCC-----CCC
Confidence 11112245678999999999999999999999999999999 888885432221 11111 11 1000 011
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHc
Q 003278 759 GEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795 (834)
Q Consensus 759 ~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~ 795 (834)
... ...+.+++.+||..+|++|||+.+|.+.|.
T Consensus 217 ~~~----~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 217 QKC----PDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCC----CHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 111 134566777999999999999999999885
No 197
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=8e-37 Score=325.94 Aligned_cols=259 Identities=24% Similarity=0.393 Sum_probs=198.1
Q ss_pred CCCCCeeeccCCeEEEEEEECCCC---eEEEEEEeccc--ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCE-----
Q 003278 113 FDEDEVLGSGGFGKVYRAVLPSDG---TVVAVKCLAEK--GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQ----- 182 (834)
Q Consensus 113 f~~~~~LG~G~fG~Vy~~~~~~~g---~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~----- 182 (834)
|...+.||+|+||.||+|.+..++ ..||||.+... .......+.+|+..++.++||||+++++++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 456789999999999999986543 78999998643 23345678999999999999999999999876654
Q ss_pred -EEEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEee
Q 003278 183 -LLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGD 261 (834)
Q Consensus 183 -~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~D 261 (834)
.++||||+++|+|..++...... .....+++.....++.|++.||.|||+. +|+||||||+|||+++++.+||+|
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~d 156 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLG-GLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVAD 156 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhcc-CCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECC
Confidence 79999999999999998654211 1224689999999999999999999985 999999999999999999999999
Q ss_pred ccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCC
Q 003278 262 FGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYP 340 (834)
Q Consensus 262 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~ 340 (834)
||+++.......+ .......++..|+|||++... .++.++|||||||++|||++ |..|+.....
T Consensus 157 fg~~~~~~~~~~~--------------~~~~~~~~~~~~~~pe~~~~~-~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~ 221 (273)
T cd05035 157 FGLSKKIYSGDYY--------------RQGRIAKMPVKWIAIESLADR-VYTSKSDVWAFGVTMWEIATRGQTPYPGVEN 221 (273)
T ss_pred ccceeeccccccc--------------cccccccCCccccCHhhcccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCH
Confidence 9999864322110 001122356789999988544 67899999999999999999 8888754221
Q ss_pred CccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhc
Q 003278 341 DDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSG 407 (834)
Q Consensus 341 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~ 407 (834)
..+..++. .+.... .. . .....+.+++..||+.||.+||++.+|++.|..
T Consensus 222 ---~~~~~~~~----~~~~~~-----~~-~----~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~ 271 (273)
T cd05035 222 ---HEIYDYLR----HGNRLK-----QP-E----DCLDELYDLMYSCWRADPKDRPTFTKLREVLEN 271 (273)
T ss_pred ---HHHHHHHH----cCCCCC-----CC-c----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 11222211 111111 11 1 112468899999999999999999999998865
No 198
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=2.7e-37 Score=333.65 Aligned_cols=268 Identities=26% Similarity=0.396 Sum_probs=204.7
Q ss_pred HHhhcCCCCCCCeeeccCCeEEEEEEECCC-----CeEEEEEEeccc-ChhhHHHHHHHHHHHHhC-CCCceeeEeeeEE
Q 003278 106 LYIGSNGFDEDEVLGSGGFGKVYRAVLPSD-----GTVVAVKCLAEK-GERFEKTFAAELVAVAHL-RHRNLVRLRGWCV 178 (834)
Q Consensus 106 l~~~t~~f~~~~~LG~G~fG~Vy~~~~~~~-----g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~ 178 (834)
+....++|+..+.||+|+||.||+|..... ...+|+|.+... .......+.+|+.++.++ +|+||++++++|.
T Consensus 7 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 86 (293)
T cd05053 7 WELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCT 86 (293)
T ss_pred cccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEc
Confidence 344556788899999999999999987533 378999998653 233446688999999999 8999999999999
Q ss_pred eCCEEEEEEEccCCCCHhHHHhcCCCc---------cccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCce
Q 003278 179 HEDQLLLVYDYMPNRSLDRVLFRRPEN---------LEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNV 249 (834)
Q Consensus 179 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~---------~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NI 249 (834)
..+..++||||+++|+|..++...... ......++|..++.++.|++.||+|||+. +|+||||||+||
T Consensus 87 ~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Ni 163 (293)
T cd05053 87 QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNV 163 (293)
T ss_pred CCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeE
Confidence 999999999999999999999654210 01235689999999999999999999985 999999999999
Q ss_pred EECCCCceEEeeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHH
Q 003278 250 MLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVV 329 (834)
Q Consensus 250 Lld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ell 329 (834)
|++.++.+||+|||+++.+...... ...+...++..|+|||.+... .++.++|||||||++|||+
T Consensus 164 l~~~~~~~kL~Dfg~~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~el~ 228 (293)
T cd05053 164 LVTEDHVMKIADFGLARDIHHIDYY--------------RKTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLLWEIF 228 (293)
T ss_pred EEcCCCeEEeCccccccccccccce--------------eccCCCCCCccccCHHHhccC-CcCcccceeehhhHHHHHh
Confidence 9999999999999999865322100 001222356789999987654 6789999999999999999
Q ss_pred h-CCccCCCCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcC
Q 003278 330 S-GRRAVDLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGS 408 (834)
Q Consensus 330 t-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~ 408 (834)
+ |..|+...... .+. .....+.... ........+.+|+..||+.+|.+||+|.++++.|...
T Consensus 229 ~~g~~p~~~~~~~---~~~----~~~~~~~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~ 291 (293)
T cd05053 229 TLGGSPYPGIPVE---ELF----KLLKEGYRME----------KPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM 291 (293)
T ss_pred cCCCCCCCCCCHH---HHH----HHHHcCCcCC----------CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence 8 88887532111 111 1111111110 0111124678999999999999999999999998753
No 199
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=5.5e-37 Score=329.58 Aligned_cols=259 Identities=23% Similarity=0.310 Sum_probs=197.6
Q ss_pred cCcCCcccccCCcEEEEEEECC------CcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEE
Q 003278 515 FSESQRVAEMDFGTAYQGFLDN------HQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVI 588 (834)
Q Consensus 515 f~~~~~ig~g~~g~vy~~~~~~------~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv 588 (834)
|...+.||+|+||.||+|...+ +..||||++.........+.|.+|+.++++++|||||++++++.+.+..+++
T Consensus 7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~ 86 (283)
T cd05091 7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMI 86 (283)
T ss_pred HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEE
Confidence 3345679999999999998632 4679999987655555567899999999999999999999999999999999
Q ss_pred EeccCCCchhhhhhcCCC----------CCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCc
Q 003278 589 YDYSATRILSHLLFHNNH----------RIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNP 658 (834)
Q Consensus 589 ~Ey~~~g~L~~~l~~~~~----------~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ 658 (834)
+||+++++|..++..... ......+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+
T Consensus 87 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~~ 163 (283)
T cd05091 87 FSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS---HHVVHKDLATRNVLVFDKLNV 163 (283)
T ss_pred EEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---cCccccccchhheEecCCCce
Confidence 999999999998853211 0011247888899999999999999996 689999999999999999999
Q ss_pred eEeeeeeccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHH
Q 003278 659 RLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVK 737 (834)
Q Consensus 659 ki~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~ 737 (834)
||+|||+++.+..... ........+++.|||||++.++.++.++|||||||++|||+| |..|+...... ....
T Consensus 164 kl~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-~~~~ 237 (283)
T cd05091 164 KISDLGLFREVYAADY-----YKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ-DVIE 237 (283)
T ss_pred Eecccccccccccchh-----eeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH-HHHH
Confidence 9999999876533221 011123356788999999998999999999999999999998 77776543222 1111
Q ss_pred HHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHcc
Q 003278 738 RVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDG 796 (834)
Q Consensus 738 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~ 796 (834)
.+. . ..... .... .+. .+..++.+||+.+|++||+|.+|++.|+.
T Consensus 238 ~i~---~--~~~~~-----~~~~-~~~---~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 238 MIR---N--RQVLP-----CPDD-CPA---WVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHH---c--CCcCC-----CCCC-CCH---HHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 111 1 11111 1111 223 35566679999999999999999999863
No 200
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-38 Score=336.88 Aligned_cols=259 Identities=25% Similarity=0.386 Sum_probs=208.1
Q ss_pred HHHHhhcCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEE
Q 003278 104 AELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQL 183 (834)
Q Consensus 104 ~el~~~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~ 183 (834)
++.+....+.....+||-|-||+||.|+|+...-.||||.+++. ....++|+.|..+|+.++|||+|+|+|.|..+..+
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPF 338 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF 338 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCe
Confidence 34444444566678999999999999999999999999999764 45567899999999999999999999999999999
Q ss_pred EEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeecc
Q 003278 184 LLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFG 263 (834)
Q Consensus 184 ~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 263 (834)
|||.|||.+|+|.++|.+... ..++---.+.++.||+.|++||... .+|||||...|+|+.++..+||+|||
T Consensus 339 YIiTEfM~yGNLLdYLRecnr-----~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFG 410 (1157)
T KOG4278|consen 339 YIITEFMCYGNLLDYLRECNR-----SEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFG 410 (1157)
T ss_pred EEEEecccCccHHHHHHHhch-----hhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccc
Confidence 999999999999999976532 2344456688999999999999985 99999999999999999999999999
Q ss_pred chhhhhhhhhhhhhcccccccccccccceeeec---cccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCC
Q 003278 264 LARWLEHELQYQMRTSSARNHQFHLAETTRIGG---TIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTY 339 (834)
Q Consensus 264 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G---t~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~ 339 (834)
|+|++..+.. |...| .+.|.|||.+..+ .++.|+|||+|||+||||.| |..|+.
T Consensus 411 LsRlMtgDTY------------------TAHAGAKFPIKWTAPEsLAyN-tFSiKSDVWAFGVLLWEIATYGMsPYP--- 468 (1157)
T KOG4278|consen 411 LSRLMTGDTY------------------TAHAGAKFPIKWTAPESLAYN-TFSIKSDVWAFGVLLWEIATYGMSPYP--- 468 (1157)
T ss_pred hhhhhcCCce------------------ecccCccCcccccCccccccc-ccccchhhHHHHHHHHHHHhcCCCCCC---
Confidence 9999865421 11122 4789999998766 67999999999999999998 665543
Q ss_pred CCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhc
Q 003278 340 PDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSG 407 (834)
Q Consensus 340 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~ 407 (834)
.-+ ...+..++..|-.++... -+...+.+|+..||+.+|.+||++.|+-+.++.
T Consensus 469 -Gid---lSqVY~LLEkgyRM~~Pe----------GCPpkVYeLMraCW~WsPsDRPsFaeiHqafEt 522 (1157)
T KOG4278|consen 469 -GID---LSQVYGLLEKGYRMDGPE----------GCPPKVYELMRACWNWSPSDRPSFAEIHQAFET 522 (1157)
T ss_pred -Ccc---HHHHHHHHhccccccCCC----------CCCHHHHHHHHHHhcCCcccCccHHHHHHHHHH
Confidence 222 123444555554333221 123579999999999999999999998877654
No 201
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.4e-36 Score=340.30 Aligned_cols=217 Identities=24% Similarity=0.357 Sum_probs=173.4
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC---hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVY 187 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 187 (834)
++|+..+.||+|+||.||+|+...+++.||||++.... ......+.+|+.+|.+++||||+++++.+.+++.+++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 36888999999999999999998899999999986432 223456889999999999999999999999999999999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhh
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARW 267 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 267 (834)
||+++|+|.+++... ..+++.....++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|..
T Consensus 81 E~~~~g~L~~~i~~~-------~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~ 150 (376)
T cd05598 81 DYIPGGDMMSLLIRL-------GIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTG 150 (376)
T ss_pred eCCCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCcc
Confidence 999999999998643 3578888899999999999999985 999999999999999999999999999853
Q ss_pred hhhhhhhh------------hhcccc--------------cc-cccccccceeeeccccCCCccccccCCCCCcccceee
Q 003278 268 LEHELQYQ------------MRTSSA--------------RN-HQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFS 320 (834)
Q Consensus 268 ~~~~~~~~------------~~~~~~--------------~~-~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~S 320 (834)
+....... ...... .. ........+...||+.|||||++... .++.++||||
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwS 229 (376)
T cd05598 151 FRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLCDWWS 229 (376)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCC-CCCcceeeee
Confidence 31100000 000000 00 00000112346799999999998654 6789999999
Q ss_pred hhhHHHHHHhCCccCCCC
Q 003278 321 FGIVVLEVVSGRRAVDLT 338 (834)
Q Consensus 321 fGvvl~ElltG~~p~~~~ 338 (834)
|||++|||+||+.||...
T Consensus 230 lGvilyell~G~~Pf~~~ 247 (376)
T cd05598 230 VGVILYEMLVGQPPFLAD 247 (376)
T ss_pred ccceeeehhhCCCCCCCC
Confidence 999999999999999754
No 202
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=5.7e-37 Score=327.24 Aligned_cols=257 Identities=23% Similarity=0.312 Sum_probs=192.7
Q ss_pred cCCcccccCCcEEEEEEECCC-c--EEEEEEecCCC-ChhHHHHHHHHHHHHHhccCCCceeEEEEEeeC------CeEE
Q 003278 517 ESQRVAEMDFGTAYQGFLDNH-Q--YVLVKRLGMSK-CPALRTRFSNELQNLARLRHRNLVQLCGWCTEQ------GEML 586 (834)
Q Consensus 517 ~~~~ig~g~~g~vy~~~~~~~-~--~vavK~~~~~~-~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~------~~~~ 586 (834)
-.+.||+|+||.||+|...+. . .||+|.++... .....+.|.+|++++++++||||++++++|... ...+
T Consensus 3 i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 82 (272)
T cd05075 3 LGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPV 82 (272)
T ss_pred cccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcE
Confidence 456799999999999997553 2 58999887543 233456789999999999999999999988532 2468
Q ss_pred EEEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeec
Q 003278 587 VIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALA 666 (834)
Q Consensus 587 lv~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla 666 (834)
++|||+++|+|..++...........++|.....++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||++
T Consensus 83 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 159 (272)
T cd05075 83 VILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSS---KSFIHRDLAARNCMLNENMNVCVADFGLS 159 (272)
T ss_pred EEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhheEEcCCCCEEECCCCcc
Confidence 999999999999887543222222358899999999999999999996 69999999999999999999999999999
Q ss_pred cccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhh
Q 003278 667 EFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEAR 745 (834)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~ 745 (834)
+........ .......+++.|+|||++.+..++.++|||||||++|||++ |+.|+....+ ........ ..
T Consensus 160 ~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-~~~~~~~~---~~ 230 (272)
T cd05075 160 KKIYNGDYY-----RQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN-SEIYDYLR---QG 230 (272)
T ss_pred cccCcccce-----ecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHHH---cC
Confidence 865332110 01122346778999999998899999999999999999999 7778754322 11111111 11
Q ss_pred cCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHcc
Q 003278 746 KRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDG 796 (834)
Q Consensus 746 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~ 796 (834)
.. . . .... ... .+.+++.+||+.||++|||+.+|++.|+.
T Consensus 231 ~~-~-~-----~~~~-~~~---~~~~li~~~l~~~p~~Rps~~~l~~~l~~ 270 (272)
T cd05075 231 NR-L-K-----QPPD-CLD---GLYSLMSSCWLLNPKDRPSFETLRCELEK 270 (272)
T ss_pred CC-C-C-----CCCC-CCH---HHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 10 0 0 0111 112 35566779999999999999999999864
No 203
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=5.2e-37 Score=326.18 Aligned_cols=254 Identities=20% Similarity=0.308 Sum_probs=197.6
Q ss_pred CcCcCCcccccCCcEEEEEEEC-CCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEecc
Q 003278 514 NFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYS 592 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~ 592 (834)
+|...+.||+|+||.||+|... .+..||+|.+..+. .....|.+|++++.+++||||++++++|...+..+++|||+
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc--hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 4666788999999999999964 47889999886432 22467899999999999999999999999999999999999
Q ss_pred CCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccC
Q 003278 593 ATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRN 672 (834)
Q Consensus 593 ~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~ 672 (834)
++++|.+++..... ..++|..++.++.|+++||+|||+ .+|+||||||+|||+++++.+||+|||++......
T Consensus 85 ~~~~L~~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~ 157 (263)
T cd05052 85 TYGNLLDYLRECNR----QEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 157 (263)
T ss_pred CCCcHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCcEEeCCCccccccccc
Confidence 99999999865321 248899999999999999999996 68999999999999999999999999999765432
Q ss_pred CCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcCcccc
Q 003278 673 DHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRPLAE 751 (834)
Q Consensus 673 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (834)
.. .......++..|+|||++.+..++.++|||||||++|||+| |..|+....... ..... ... .
T Consensus 158 ~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~-~~~~~---~~~---~-- 222 (263)
T cd05052 158 TY------TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELL---EKG---Y-- 222 (263)
T ss_pred ee------eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH-HHHHH---HCC---C--
Confidence 11 11112234678999999999999999999999999999999 888875432221 11111 100 0
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccC
Q 003278 752 LVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGN 797 (834)
Q Consensus 752 ~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~ 797 (834)
.+...... +. .+.+++.+||+.+|++||||.++.+.|+.+
T Consensus 223 --~~~~~~~~-~~---~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 223 --RMERPEGC-PP---KVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred --CCCCCCCC-CH---HHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 01111111 23 345566699999999999999999998753
No 204
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.5e-37 Score=332.38 Aligned_cols=262 Identities=24% Similarity=0.387 Sum_probs=200.5
Q ss_pred CCCCCCCeeeccCCeEEEEEEEC----CCCeEEEEEEecccC-hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLP----SDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLL 185 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~----~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 185 (834)
++|+..+.||+|+||.||+|.+. .++..||+|.+.... ......|.+|+.++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 45777899999999999999852 356789999986432 3344678999999999999999999999999999999
Q ss_pred EEEccCCCCHhHHHhcCCCc----------cccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCC
Q 003278 186 VYDYMPNRSLDRVLFRRPEN----------LEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQY 255 (834)
Q Consensus 186 V~Ey~~~gsL~~~l~~~~~~----------~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~ 255 (834)
||||+++|+|.+++...... ......+++.+.+.++.|++.||.|||+. +|+||||||+|||+++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcCCC
Confidence 99999999999998643211 01123588999999999999999999985 999999999999999999
Q ss_pred ceEEeeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCcc
Q 003278 256 NARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRA 334 (834)
Q Consensus 256 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p 334 (834)
.+||+|||+++.+...... .......++..|+|||++..+ .++.++|||||||++|||+| |..|
T Consensus 162 ~~kl~dfg~~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~~g~~p 226 (283)
T cd05090 162 HVKISDLGLSREIYSADYY--------------RVQPKSLLPIRWMPPEAIMYG-KFSSDSDIWSFGVVLWEIFSFGLQP 226 (283)
T ss_pred cEEeccccccccccCCcce--------------ecccCCCccceecChHHhccC-CCCchhhhHHHHHHHHHHHcCCCCC
Confidence 9999999999754321100 012233467889999988654 57899999999999999999 8888
Q ss_pred CCCCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhc
Q 003278 335 VDLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSG 407 (834)
Q Consensus 335 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~ 407 (834)
+..... ..+.. ......... .. ... ...+..++..||+.+|.+||++.+|.+.|.+
T Consensus 227 ~~~~~~---~~~~~----~~~~~~~~~-----~~-~~~----~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 227 YYGFSN---QEVIE----MVRKRQLLP-----CS-EDC----PPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred CCCCCH---HHHHH----HHHcCCcCC-----CC-CCC----CHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 753221 11111 111111111 00 111 2457889999999999999999999998764
No 205
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=8.2e-37 Score=325.09 Aligned_cols=261 Identities=20% Similarity=0.290 Sum_probs=202.0
Q ss_pred hCcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCC--CChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMS--KCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIY 589 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~--~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~ 589 (834)
++|...+.||+|+||.||+|.. .++..||||.+... ........|.+|++++++++||||+++++++.+.+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 4677788899999999999985 46889999987642 23344567899999999999999999999999999999999
Q ss_pred eccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccc
Q 003278 590 DYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFL 669 (834)
Q Consensus 590 Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~ 669 (834)
||+++|+|..++..... ....+++.....++.|++.||+|||+ .+|+||||||+|||++.++.++++|||++...
T Consensus 82 e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~ 156 (267)
T cd08228 82 ELADAGDLSQMIKYFKK--QKRLIPERTVWKYFVQLCSAVEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFF 156 (267)
T ss_pred EecCCCcHHHHHHHhhh--ccCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCCHHHEEEcCCCCEEECccccceec
Confidence 99999999988864322 12347788889999999999999996 69999999999999999999999999999765
Q ss_pred ccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCcc
Q 003278 670 TRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPL 749 (834)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 749 (834)
.... .......|++.|+|||++.+..++.++|||||||++|||+||+.|+........ ......... .
T Consensus 157 ~~~~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~--~~~~~~~~~--~- 224 (267)
T cd08228 157 SSKT-------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLF--SLCQKIEQC--D- 224 (267)
T ss_pred cchh-------HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHH--HHHHHHhcC--C-
Confidence 4321 111234688999999999888899999999999999999999999854322111 111111100 0
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccC
Q 003278 750 AELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGN 797 (834)
Q Consensus 750 ~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~ 797 (834)
.+..... ..-..+.+++.+||+.+|++|||+.+|++.|+..
T Consensus 225 ----~~~~~~~---~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 225 ----YPPLPTE---HYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred ----CCCCChh---hcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 1111111 1113455666799999999999999999999765
No 206
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=9.1e-37 Score=334.95 Aligned_cols=244 Identities=26% Similarity=0.279 Sum_probs=189.4
Q ss_pred CeeeccCCeEEEEEEECCCCeEEEEEEeccc---ChhhHHHHHHHHH-HHHhCCCCceeeEeeeEEeCCEEEEEEEccCC
Q 003278 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK---GERFEKTFAAELV-AVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPN 192 (834)
Q Consensus 117 ~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~---~~~~~~~~~~E~~-~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 192 (834)
+.||+|+||+||+|....+|+.||||++... .....+.+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 4699999999999999899999999998653 1223345566655 57789999999999999999999999999999
Q ss_pred CCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhh
Q 003278 193 RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHEL 272 (834)
Q Consensus 193 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~ 272 (834)
|+|..++... ..+++.....++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~L~~~l~~~-------~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~- 149 (325)
T cd05604 81 GELFFHLQRE-------RSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ- 149 (325)
T ss_pred CCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCC-
Confidence 9998887542 4688999999999999999999985 9999999999999999999999999998742110
Q ss_pred hhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHHHH
Q 003278 273 QYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIRR 352 (834)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~~~ 352 (834)
........||+.|+|||.+... .++.++|||||||++|||++|+.||...... .....
T Consensus 150 ---------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~G~~pf~~~~~~------~~~~~ 207 (325)
T cd05604 150 ---------------SDTTTTFCGTPEYLAPEVIRKQ-PYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA------EMYDN 207 (325)
T ss_pred ---------------CCCcccccCChhhCCHHHHcCC-CCCCcCccccccceehhhhcCCCCCCCCCHH------HHHHH
Confidence 0113456799999999998654 5789999999999999999999998643211 11111
Q ss_pred HhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHh
Q 003278 353 LSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAV 405 (834)
Q Consensus 353 ~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l 405 (834)
... +.. ...+ .. ...+.++...|++.+|.+||++.+.++.+
T Consensus 208 ~~~-~~~--~~~~-----~~----~~~~~~ll~~ll~~~p~~R~~~~~~~~~i 248 (325)
T cd05604 208 ILH-KPL--VLRP-----GA----SLTAWSILEELLEKDRQRRLGAKEDFLEI 248 (325)
T ss_pred HHc-CCc--cCCC-----CC----CHHHHHHHHHHhccCHHhcCCCCCCHHHH
Confidence 111 111 0111 11 13467889999999999999997554443
No 207
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=1.4e-36 Score=323.95 Aligned_cols=256 Identities=23% Similarity=0.331 Sum_probs=187.2
Q ss_pred cccccCCcEEEEEEECC---CcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEeccCCCc
Q 003278 520 RVAEMDFGTAYQGFLDN---HQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRI 596 (834)
Q Consensus 520 ~ig~g~~g~vy~~~~~~---~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~~g~ 596 (834)
.||+|+||.||+|...+ ...+++|.+...........|.+|+.+++.++||||++++|+|.+....++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999997543 346888887655444455678999999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCCCC
Q 003278 597 LSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGH 676 (834)
Q Consensus 597 L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~~~ 676 (834)
|.+++....... ....++...+.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||++.........
T Consensus 82 L~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~- 156 (269)
T cd05042 82 LKNYLRSNRGMV-AQMAQKDVLQRMACEVASGLLWLHQ---ADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYY- 156 (269)
T ss_pred HHHHHHhccccc-cccccHHHHHHHHHHHHHHHHHHHh---cCEecccccHhheEecCCCcEEEeccccccccccchhe-
Confidence 999987643211 1235677788999999999999997 68999999999999999999999999998653222110
Q ss_pred cccccCccccccccCccchhcccc-------CCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcCc
Q 003278 677 RKATSGNRSVRGIFGYMSPEYIES-------GEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRP 748 (834)
Q Consensus 677 ~~~~~~~~~~~Gt~~Y~aPE~~~~-------~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 748 (834)
.......+++.|+|||++.. ..++.++|||||||++|||+| |..|+....+...+...... .
T Consensus 157 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~------~ 226 (269)
T cd05042 157 ----ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVRE------Q 226 (269)
T ss_pred ----eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhc------c
Confidence 01122346778999998743 356789999999999999999 66776543222211111110 1
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHc
Q 003278 749 LAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795 (834)
Q Consensus 749 ~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~ 795 (834)
...+.++.+...++ . .+.+++..|| .||++|||+.+|++.|.
T Consensus 227 ~~~~~~~~~~~~~~-~---~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 227 DIKLPKPQLDLKYS-D---RWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CccCCCCcccccCC-H---HHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 11122222222222 2 2334555788 59999999999999873
No 208
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=7.3e-37 Score=327.88 Aligned_cols=248 Identities=26% Similarity=0.328 Sum_probs=193.0
Q ss_pred eeccCCeEEEEEEECCCCeEEEEEEecccC---hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEccCCCCH
Q 003278 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSL 195 (834)
Q Consensus 119 LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 195 (834)
||+|+||.||++..+.+|+.||+|++.... ....+.+..|+.++.+++||||+++++++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 799999999999998899999999986431 12234556799999999999999999999999999999999999999
Q ss_pred hHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhhhhh
Q 003278 196 DRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQ 275 (834)
Q Consensus 196 ~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~~ 275 (834)
..++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.++|+|||++..+....
T Consensus 81 ~~~~~~~~-----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~--- 149 (277)
T cd05607 81 KYHIYNVG-----ERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK--- 149 (277)
T ss_pred HHHHHhcc-----ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc---
Confidence 98886432 24588999999999999999999985 99999999999999999999999999987542210
Q ss_pred hhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHHHHHhh
Q 003278 276 MRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIRRLSD 355 (834)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~~~~~~ 355 (834)
..+...||+.|+|||++... .++.++|||||||++|||+||+.|+...... ............
T Consensus 150 --------------~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGv~l~el~~g~~p~~~~~~~--~~~~~~~~~~~~ 212 (277)
T cd05607 150 --------------TITQRAGTNGYMAPEILKEE-PYSYPVDWFAMGCSIYEMVAGRTPFKDHKEK--VAKEELKRRTLE 212 (277)
T ss_pred --------------eeeccCCCCCccCHHHHccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCcch--hhHHHHHHHhhc
Confidence 12234589999999998765 4799999999999999999999998643221 111111121111
Q ss_pred cCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHh
Q 003278 356 EGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAV 405 (834)
Q Consensus 356 ~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l 405 (834)
.... .....+ ...+.+++..||+.||.+||++.|+++.+
T Consensus 213 -~~~~------~~~~~~----~~~~~~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 213 -DEVK------FEHQNF----TEESKDICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred -cccc------cccccC----CHHHHHHHHHHhccCHhhCCCCccchhhh
Confidence 1100 000111 13578899999999999999998877544
No 209
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=4.5e-37 Score=336.32 Aligned_cols=239 Identities=26% Similarity=0.333 Sum_probs=188.7
Q ss_pred CeeeccCCeEEEEEEE---CCCCeEEEEEEecccC--hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEccC
Q 003278 117 EVLGSGGFGKVYRAVL---PSDGTVVAVKCLAEKG--ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMP 191 (834)
Q Consensus 117 ~~LG~G~fG~Vy~~~~---~~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 191 (834)
+.||+|+||.||++.. ..+|+.||+|++.... ......+.+|+.++++++||||+++++++..++..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999876 3578999999986532 2234557789999999999999999999999999999999999
Q ss_pred CCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhh
Q 003278 192 NRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHE 271 (834)
Q Consensus 192 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 271 (834)
+|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~L~~~l~~~-------~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~ 151 (318)
T cd05582 82 GGDLFTRLSKE-------VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 151 (318)
T ss_pred CCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCC
Confidence 99999988542 3589999999999999999999985 9999999999999999999999999998753211
Q ss_pred hhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHHH
Q 003278 272 LQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIR 351 (834)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~~ 351 (834)
. .......||+.|+|||.+... .++.++|||||||++|||+||+.||..... .... .
T Consensus 152 ~----------------~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~---~~~~---~ 208 (318)
T cd05582 152 E----------------KKAYSFCGTVEYMAPEVVNRR-GHTQSADWWSFGVLMFEMLTGSLPFQGKDR---KETM---T 208 (318)
T ss_pred C----------------CceecccCChhhcCHHHHcCC-CCCCccceeccceEeeeeccCCCCCCCCCH---HHHH---H
Confidence 0 112345799999999988654 568899999999999999999999864321 1111 1
Q ss_pred HHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhh
Q 003278 352 RLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKW 400 (834)
Q Consensus 352 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~ 400 (834)
.... ... .+. ... ...+..+...||+.||.+||++.+
T Consensus 209 ~i~~-~~~------~~p-~~~----~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 209 MILK-AKL------GMP-QFL----SPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred HHHc-CCC------CCC-CCC----CHHHHHHHHHHhhcCHhHcCCCCC
Confidence 1111 110 010 111 135678899999999999999766
No 210
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=4.6e-37 Score=325.44 Aligned_cols=249 Identities=18% Similarity=0.307 Sum_probs=192.2
Q ss_pred cccccCCcEEEEEEE---CCCcEEEEEEecCCC-ChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEeccCCC
Q 003278 520 RVAEMDFGTAYQGFL---DNHQYVLVKRLGMSK-CPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATR 595 (834)
Q Consensus 520 ~ig~g~~g~vy~~~~---~~~~~vavK~~~~~~-~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~~g 595 (834)
.||+|+||.||+|.+ .++..+|+|+++... .+...+.|.+|+.++++++||||++++|++.. +..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCCC
Confidence 589999999999975 356789999986443 33456789999999999999999999999864 5678999999999
Q ss_pred chhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCCC
Q 003278 596 ILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHG 675 (834)
Q Consensus 596 ~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~~ 675 (834)
+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++.+......
T Consensus 81 ~L~~~l~~~~------~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~ 151 (257)
T cd05116 81 PLNKFLQKNK------HVTEKNITELVHQVSMGMKYLEE---TNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENY 151 (257)
T ss_pred cHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchhhEEEcCCCeEEECCCccccccCCCCCe
Confidence 9999986432 37888999999999999999996 68999999999999999999999999999765432210
Q ss_pred CcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcCccccccc
Q 003278 676 HRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRPLAELVD 754 (834)
Q Consensus 676 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 754 (834)
........++..|||||.+..+.++.++|||||||++|||+| |+.|+...... .....+. ....
T Consensus 152 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-~~~~~i~---~~~~------- 216 (257)
T cd05116 152 ----YKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN-EVTQMIE---SGER------- 216 (257)
T ss_pred ----eeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHH---CCCC-------
Confidence 001112245678999999988889999999999999999998 88888643322 1212111 1111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccC
Q 003278 755 LSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGN 797 (834)
Q Consensus 755 ~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~ 797 (834)
+..+... +. .+.+++.+||+.||++||+|.+|+..|+..
T Consensus 217 ~~~~~~~-~~---~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 217 MECPQRC-PP---EMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred CCCCCCC-CH---HHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 1111122 23 345566699999999999999999999764
No 211
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=4.1e-37 Score=345.52 Aligned_cols=267 Identities=22% Similarity=0.358 Sum_probs=203.6
Q ss_pred hhcCCCCCCCeeeccCCeEEEEEEEC-----CCCeEEEEEEecccC-hhhHHHHHHHHHHHHhCC-CCceeeEeeeEEeC
Q 003278 108 IGSNGFDEDEVLGSGGFGKVYRAVLP-----SDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHLR-HRNLVRLRGWCVHE 180 (834)
Q Consensus 108 ~~t~~f~~~~~LG~G~fG~Vy~~~~~-----~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~-H~nIv~l~g~~~~~ 180 (834)
+..++|...+.||+|+||.||+|++. ..+..||||++.... ....+.+.+|+.+|.++. |||||+++|+|...
T Consensus 34 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~ 113 (401)
T cd05107 34 MPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKG 113 (401)
T ss_pred ecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC
Confidence 34456788899999999999999864 245689999997542 233457889999999997 99999999999999
Q ss_pred CEEEEEEEccCCCCHhHHHhcCCCcc------------------------------------------------------
Q 003278 181 DQLLLVYDYMPNRSLDRVLFRRPENL------------------------------------------------------ 206 (834)
Q Consensus 181 ~~~~lV~Ey~~~gsL~~~l~~~~~~~------------------------------------------------------ 206 (834)
+..++||||+++|+|.++|++.....
T Consensus 114 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (401)
T cd05107 114 GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQ 193 (401)
T ss_pred CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchh
Confidence 99999999999999999997542100
Q ss_pred -------------------------------------ccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCce
Q 003278 207 -------------------------------------EAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNV 249 (834)
Q Consensus 207 -------------------------------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NI 249 (834)
.....++|.....|+.|++.||.|||+. +|+||||||+||
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~Ni 270 (401)
T cd05107 194 DMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARNV 270 (401)
T ss_pred cchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcceE
Confidence 1123578899999999999999999985 999999999999
Q ss_pred EECCCCceEEeeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHH
Q 003278 250 MLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVV 329 (834)
Q Consensus 250 Lld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ell 329 (834)
|+++++.+||+|||+++.+...... .......|++.|||||.+... .++.++|||||||++|||+
T Consensus 271 Ll~~~~~~kL~DfGla~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvil~e~l 335 (401)
T cd05107 271 LICEGKLVKICDFGLARDIMRDSNY--------------ISKGSTFLPLKWMAPESIFNN-LYTTLSDVWSFGILLWEIF 335 (401)
T ss_pred EEeCCCEEEEEecCcceeccccccc--------------ccCCCcCCCCceeChHHhcCC-CCCcHhHHHHHHHHHHHHH
Confidence 9999999999999999754221100 011233578899999988654 5789999999999999999
Q ss_pred h-CCccCCCCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcC
Q 003278 330 S-GRRAVDLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGS 408 (834)
Q Consensus 330 t-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~ 408 (834)
+ |+.|+......+ ........+.... .+ .. ....+.+++..||+.+|..||+|.+|++.|+..
T Consensus 336 ~~g~~P~~~~~~~~------~~~~~~~~~~~~~--~p----~~----~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 336 TLGGTPYPELPMNE------QFYNAIKRGYRMA--KP----AH----ASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred HcCCCCCCCCCchH------HHHHHHHcCCCCC--CC----CC----CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 8 888875432111 1111111121110 00 11 124688999999999999999999999998764
No 212
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=4.4e-37 Score=329.42 Aligned_cols=261 Identities=23% Similarity=0.293 Sum_probs=200.1
Q ss_pred hhCcCcCCcccccCCcEEEEEEECC------CcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeE
Q 003278 512 TNNFSESQRVAEMDFGTAYQGFLDN------HQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEM 585 (834)
Q Consensus 512 t~~f~~~~~ig~g~~g~vy~~~~~~------~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~ 585 (834)
+++|...+.||+|+||.||+|...+ +..||+|.+...........|.+|+.++++++||||+++++++.+.+..
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR 84 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence 4678888899999999999998753 5678999886555455556799999999999999999999999998999
Q ss_pred EEEEeccCCCchhhhhhcCCCCC-CCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCC---CceEe
Q 003278 586 LVIYDYSATRILSHLLFHNNHRI-GHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDM---NPRLG 661 (834)
Q Consensus 586 ~lv~Ey~~~g~L~~~l~~~~~~~-~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~---~~ki~ 661 (834)
++||||+++++|.+++....... ....++|..++.++.||+.||+|||+ .+++||||||+|||++.++ .+|++
T Consensus 85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE---NHFIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchheEEEeccCCCcceEec
Confidence 99999999999999987643211 12358999999999999999999997 6899999999999998754 58999
Q ss_pred eeeeccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHH
Q 003278 662 SFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVH 740 (834)
Q Consensus 662 DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~ 740 (834)
|||+++.+..... ........++..|||||++.++.++.++|||||||++|||+| |..||....... ....+.
T Consensus 162 dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~-~~~~~~ 235 (277)
T cd05036 162 DFGMARDIYRASY-----YRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE-VMEFVT 235 (277)
T ss_pred cCccccccCCccc-----eecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH-HHHHHH
Confidence 9999986532211 000112234567999999999999999999999999999997 888886443322 111111
Q ss_pred HHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHc
Q 003278 741 EFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795 (834)
Q Consensus 741 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~ 795 (834)
..... ...... + ..+.+++.+||+.+|++|||+.+|++.|+
T Consensus 236 ----~~~~~------~~~~~~-~---~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 236 ----GGGRL------DPPKGC-P---GPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred ----cCCcC------CCCCCC-C---HHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 11100 011111 1 24556667999999999999999999875
No 213
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.7e-36 Score=328.14 Aligned_cols=267 Identities=20% Similarity=0.274 Sum_probs=199.6
Q ss_pred hCcCcCCcccccCCcEEEEEEEC-----------------CCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLD-----------------NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQL 575 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~-----------------~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l 575 (834)
++|...+.||+|+||.||++... +...||+|.+...........|.+|+++|++++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 45777788999999999997532 2346899998765555566789999999999999999999
Q ss_pred EEEEeeCCeEEEEEeccCCCchhhhhhcCCCCC-----CCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCce
Q 003278 576 CGWCTEQGEMLVIYDYSATRILSHLLFHNNHRI-----GHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAI 650 (834)
Q Consensus 576 ~g~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~-----~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NI 650 (834)
++++...+..++||||+++|+|.+++....... ....+++.....++.|++.||+|||+ .+|+||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS---LNFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCeecccCChheE
Confidence 999999999999999999999999987643211 12347888999999999999999996 6899999999999
Q ss_pred eecCCCCceEeeeeeccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh--CCCccCC
Q 003278 651 TLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT--GQMAVDF 728 (834)
Q Consensus 651 Lld~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t--G~~p~~~ 728 (834)
|+++++.+|++|||+++.+..... ........+++.|+|||+...+.++.++|||||||++|||+| |..|+..
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~ 236 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDY-----YRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQ 236 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcc-----eeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccc
Confidence 999999999999999976432211 001112345678999999888899999999999999999998 6667653
Q ss_pred CCCchhHHHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHc
Q 003278 729 RLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795 (834)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~ 795 (834)
..+.. .......+...... ....+ .... .+ ..+.+++.+||+.||++||||.+|++.|+
T Consensus 237 ~~~~~-~~~~~~~~~~~~~~--~~~~~-~~~~-~~---~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 237 LSDEQ-VIENTGEFFRDQGR--QVYLP-KPAL-CP---DSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred cChHH-HHHHHHHHHhhccc--cccCC-CCCC-CC---HHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 32222 22211111110000 00000 0111 12 34567777999999999999999999885
No 214
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=8.5e-37 Score=327.90 Aligned_cols=244 Identities=17% Similarity=0.207 Sum_probs=185.5
Q ss_pred ccccCCcEEEEEEE-CCCcEEEEEEecCCCCh--hHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEeccCCCch
Q 003278 521 VAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCP--ALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRIL 597 (834)
Q Consensus 521 ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~--~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~~g~L 597 (834)
||+|+||+||++.. .++..+|||.+...... ...+.|..|+.++++++||||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 68999999999985 46789999998643221 2235678899999999999999999999999999999999999999
Q ss_pred hhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCCCCc
Q 003278 598 SHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHR 677 (834)
Q Consensus 598 ~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~~~~ 677 (834)
..++..... ....+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||++..+....
T Consensus 81 ~~~~~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~---- 151 (280)
T cd05608 81 RYHIYNVDE--ENPGFPEPRACFYTAQIISGLEHLHQ---RRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ---- 151 (280)
T ss_pred HHHHHhccc--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCccceecCCCC----
Confidence 888754321 12348899999999999999999996 699999999999999999999999999997653321
Q ss_pred ccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCcccccccccc
Q 003278 678 KATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSL 757 (834)
Q Consensus 678 ~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 757 (834)
.......||+.|||||++.+..++.++|||||||++|||+||+.||................ ...+ ...
T Consensus 152 ---~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~--~~~~------~~~ 220 (280)
T cd05608 152 ---SKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRI--LNDS------VTY 220 (280)
T ss_pred ---ccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhh--cccC------CCC
Confidence 11224579999999999999999999999999999999999999986432211110000000 0000 011
Q ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCChh
Q 003278 758 NGEYNHKELMRLIKLGIACTLSNPELRPSMR 788 (834)
Q Consensus 758 ~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~ 788 (834)
...++ . .+.+++.+||+.||++||+++
T Consensus 221 ~~~~~-~---~~~~li~~~l~~~P~~R~~~~ 247 (280)
T cd05608 221 PDKFS-P---ASKSFCEALLAKDPEKRLGFR 247 (280)
T ss_pred cccCC-H---HHHHHHHHHhcCCHHHhcCCC
Confidence 11111 2 344566689999999999543
No 215
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.5e-37 Score=354.34 Aligned_cols=265 Identities=21% Similarity=0.272 Sum_probs=192.5
Q ss_pred hcCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeC--------
Q 003278 109 GSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHE-------- 180 (834)
Q Consensus 109 ~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~-------- 180 (834)
..++|...++||+|+||.||+|+...+++.||||++.... ....+|+.+|+.++|||||++++++...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 4567999999999999999999998899999999885432 2245799999999999999999987542
Q ss_pred CEEEEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCC-ceEE
Q 003278 181 DQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQY-NARL 259 (834)
Q Consensus 181 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~-~~kl 259 (834)
..+++||||+++ +|.+++.... .....+++.....++.|++.||+|||+. +|+||||||+|||++.++ .+||
T Consensus 140 ~~l~lvmE~~~~-~l~~~~~~~~---~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL 212 (440)
T PTZ00036 140 IFLNVVMEFIPQ-TVHKYMKHYA---RNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKL 212 (440)
T ss_pred eEEEEEEecCCc-cHHHHHHHHh---hcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceee
Confidence 246799999985 6766664321 1235689999999999999999999986 999999999999999654 6999
Q ss_pred eeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCC
Q 003278 260 GDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTY 339 (834)
Q Consensus 260 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~ 339 (834)
+|||+|+.+.... ......||+.|+|||++.....++.++|||||||++|||+||+.||....
T Consensus 213 ~DFGla~~~~~~~-----------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~ 275 (440)
T PTZ00036 213 CDFGSAKNLLAGQ-----------------RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQS 275 (440)
T ss_pred eccccchhccCCC-----------------CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999998542210 12334689999999988665568999999999999999999999986533
Q ss_pred CCccchHHHHHHHHhhcC----------ccccccccccCCC----CCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 340 PDDQIILLDWIRRLSDEG----------KVLQAGDNRLSDG----SYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 340 ~~~~~~l~~~~~~~~~~~----------~~~~~~d~~l~~~----~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
..+. +...+. ..... ...+..-+..... .++......+.+|+..||+.||.+||++.+++..
T Consensus 276 ~~~~--~~~i~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 276 SVDQ--LVRIIQ-VLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred hHHH--HHHHHH-HhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 2211 111111 00000 0000000000000 0011112457889999999999999999998753
No 216
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.1e-36 Score=329.68 Aligned_cols=267 Identities=24% Similarity=0.388 Sum_probs=199.6
Q ss_pred CCCCCCCeeeccCCeEEEEEEEC----------------CCCeEEEEEEeccc-ChhhHHHHHHHHHHHHhCCCCceeeE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLP----------------SDGTVVAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVRL 173 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~----------------~~g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l 173 (834)
++|+..+.||+|+||.||++... .++..||+|.+... .....+.|.+|+.++++++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 56888999999999999998542 23457999998754 33455789999999999999999999
Q ss_pred eeeEEeCCEEEEEEEccCCCCHhHHHhcCCCcc----ccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCce
Q 003278 174 RGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENL----EAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNV 249 (834)
Q Consensus 174 ~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~----~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NI 249 (834)
++++...+..++||||+++|+|.+++....... .....++|.+...++.|++.||+|||+. +|+||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChheE
Confidence 999999999999999999999999987643211 1124588999999999999999999985 999999999999
Q ss_pred EECCCCceEEeeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHH
Q 003278 250 MLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVV 329 (834)
Q Consensus 250 Lld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ell 329 (834)
|++.++.++|+|||+++.+...... .......+++.|+|||....+ .++.++|||||||++|||+
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~--------------~~~~~~~~~~~~~~pe~~~~~-~~~~~~DiwSlG~~l~el~ 226 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDYY--------------RIQGRAVLPIRWMSWESILLG-KFTTASDVWAFGVTLWEIL 226 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcce--------------eccCcCcCccccCCHHHHhcC-CccchhhhhHHHHHHHHHH
Confidence 9999999999999999754221100 001223356789999987655 5799999999999999999
Q ss_pred h--CCccCCCCCCCccchHHHHHHHHhh-cCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhh
Q 003278 330 S--GRRAVDLTYPDDQIILLDWIRRLSD-EGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVS 406 (834)
Q Consensus 330 t--G~~p~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~ 406 (834)
| |..|+...... . .......... .+..... +.. .. ....+.+++.+||+.||.+||+|.+|++.|+
T Consensus 227 ~~~~~~p~~~~~~~--~-~~~~~~~~~~~~~~~~~~--~~~--~~----~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 227 TLCKEQPYSQLSDE--Q-VIENTGEFFRDQGRQVYL--PKP--AL----CPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred HhCCCCCccccChH--H-HHHHHHHHHhhccccccC--CCC--CC----CCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 9 55666432211 1 1111111111 1110100 000 11 1256889999999999999999999999875
No 217
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=5.6e-37 Score=325.42 Aligned_cols=254 Identities=20% Similarity=0.315 Sum_probs=199.8
Q ss_pred hCcCcCCcccccCCcEEEEEEECCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEecc
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYS 592 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~ 592 (834)
++|...+.||+|+||.||+|...++..||||.+..... ..+.|.+|+.++++++||||+++++++...+..++||||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM--DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM 83 (261)
T ss_pred hheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcc--cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence 45777789999999999999987888899999865432 2456899999999999999999999999999999999999
Q ss_pred CCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccC
Q 003278 593 ATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRN 672 (834)
Q Consensus 593 ~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~ 672 (834)
++++|.+++.... ...++|.....++.|++.||.|||+ .+|+||||||+||++++++.+||+|||+++.....
T Consensus 84 ~~~~L~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05068 84 KYGSLLEYLQGGA----GRALKLPQLIDMAAQVASGMAYLEA---QNYIHRDLAARNVLVGENNICKVADFGLARVIKED 156 (261)
T ss_pred cCCcHHHHHhccC----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCcceEEEcCCCCEEECCcceEEEccCC
Confidence 9999999986532 1247899999999999999999996 68999999999999999999999999999875422
Q ss_pred CCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcCcccc
Q 003278 673 DHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRPLAE 751 (834)
Q Consensus 673 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (834)
.. .......++..|+|||++.+..++.++|||||||++|||+| |+.|+....+. .+...+. .....
T Consensus 157 ~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-~~~~~~~----~~~~~-- 223 (261)
T cd05068 157 IY------EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA-EVLQQVD----QGYRM-- 223 (261)
T ss_pred cc------cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH-HHHHHHH----cCCCC--
Confidence 11 01111233467999999998999999999999999999999 88887543322 1111111 10000
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHcc
Q 003278 752 LVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDG 796 (834)
Q Consensus 752 ~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~ 796 (834)
..... ....+.+++.+||..+|++||+|.+|.+.|+.
T Consensus 224 ----~~~~~----~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 224 ----PCPPG----CPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred ----CCCCc----CCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 00111 11345667779999999999999999999974
No 218
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=5.6e-37 Score=326.39 Aligned_cols=257 Identities=28% Similarity=0.417 Sum_probs=201.5
Q ss_pred cCCCCCCCeeeccCCeEEEEEEECCC---CeEEEEEEeccc-ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEE
Q 003278 110 SNGFDEDEVLGSGGFGKVYRAVLPSD---GTVVAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLL 185 (834)
Q Consensus 110 t~~f~~~~~LG~G~fG~Vy~~~~~~~---g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 185 (834)
.++|+..+.||+|+||.||+|.+..+ ...||||.+... .......|.+|+.++.+++||||+++++++...+..++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 82 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI 82 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence 35788999999999999999998643 457999988654 23345678999999999999999999999999999999
Q ss_pred EEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccch
Q 003278 186 VYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLA 265 (834)
Q Consensus 186 V~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 265 (834)
||||+++|+|.+++.... ..++|..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++
T Consensus 83 v~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~ 153 (266)
T cd05033 83 ITEYMENGSLDKFLREND------GKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLS 153 (266)
T ss_pred EEEcCCCCCHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchh
Confidence 999999999999986532 3689999999999999999999985 9999999999999999999999999999
Q ss_pred hhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCccc
Q 003278 266 RWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQI 344 (834)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~ 344 (834)
+.+..... . ..+....+++.|+|||.+... .++.++|||||||++|||+| |..|+.... ..
T Consensus 154 ~~~~~~~~------~--------~~~~~~~~~~~y~~Pe~~~~~-~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~---~~ 215 (266)
T cd05033 154 RRLEDSEA------T--------YTTKGGKIPIRWTAPEAIAYR-KFTSASDVWSFGIVMWEVMSYGERPYWDMS---NQ 215 (266)
T ss_pred hccccccc------c--------eeccCCCCCccccChhhhccC-CCccccchHHHHHHHHHHHccCCCCCCCCC---HH
Confidence 86531100 0 001122356789999988654 67899999999999999998 988875321 11
Q ss_pred hHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhc
Q 003278 345 ILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSG 407 (834)
Q Consensus 345 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~ 407 (834)
.+...+. .+... +.. . .....+.+++..||+.+|++||+|.+|++.|..
T Consensus 216 ~~~~~~~----~~~~~----~~~--~----~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~ 264 (266)
T cd05033 216 DVIKAVE----DGYRL----PPP--M----DCPSALYQLMLDCWQKDRNERPTFSQIVSTLDK 264 (266)
T ss_pred HHHHHHH----cCCCC----CCC--C----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 1222211 11110 000 1 112467899999999999999999999999865
No 219
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=5.3e-37 Score=342.10 Aligned_cols=261 Identities=18% Similarity=0.206 Sum_probs=193.9
Q ss_pred hCcCcCCcccccCCcEEEEEEEC-CCcEEEEEEecCCC--ChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSK--CPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIY 589 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~ 589 (834)
++|...+.||+|+||+||++... ++..||||.+.... .......+.+|+.++.+++|||||++++++.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 36777889999999999999854 57899999986432 1223456888999999999999999999999999999999
Q ss_pred eccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccc
Q 003278 590 DYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFL 669 (834)
Q Consensus 590 Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~ 669 (834)
||+++|+|.+++...+ .+++.....++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.+
T Consensus 81 E~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~lH~---~givHrDlKp~NILi~~~~~vkL~DFGla~~~ 151 (363)
T cd05628 81 EFLPGGDMMTLLMKKD------TLTEEETQFYIAETVLAIDSIHQ---LGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGL 151 (363)
T ss_pred cCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCCEEEeeccCcccc
Confidence 9999999999986532 37888889999999999999996 69999999999999999999999999999764
Q ss_pred ccCCCCC----------------------------cccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh
Q 003278 670 TRNDHGH----------------------------RKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721 (834)
Q Consensus 670 ~~~~~~~----------------------------~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t 721 (834)
....... ..........+||+.|||||++.+..++.++|||||||+||||+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~ 231 (363)
T cd05628 152 KKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLI 231 (363)
T ss_pred cccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHh
Confidence 3211000 000001124689999999999999999999999999999999999
Q ss_pred CCCccCCCCCchhHHHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 722 GQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 722 G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
|+.||....+.... ..+..+ ... +..+.. ... ..++..++.-+ .|...++..||++.||++
T Consensus 232 G~~Pf~~~~~~~~~-~~i~~~---~~~---~~~p~~-~~~-s~~~~~li~~l-~~~~~~r~~r~~~~ei~~ 292 (363)
T cd05628 232 GYPPFCSETPQETY-KKVMNW---KET---LIFPPE-VPI-SEKAKDLILRF-CCEWEHRIGAPGVEEIKT 292 (363)
T ss_pred CCCCCCCCCHHHHH-HHHHcC---cCc---ccCCCc-CCC-CHHHHHHHHHH-cCChhhcCCCCCHHHHhC
Confidence 99999754433221 111110 000 101100 011 23444444322 244445667899999975
No 220
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=3.2e-37 Score=345.02 Aligned_cols=264 Identities=23% Similarity=0.305 Sum_probs=197.4
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc--ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCC-----EEE
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK--GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHED-----QLL 184 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~-----~~~ 184 (834)
+|+..+.||+|+||.||+|....+|+.||||++... .....+.+.+|+.+++.++||||+++++++...+ ..|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 478889999999999999999889999999998643 2234567889999999999999999999998877 799
Q ss_pred EEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccc
Q 003278 185 LVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGL 264 (834)
Q Consensus 185 lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 264 (834)
+||||+. ++|...+... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 81 lv~e~~~-~~l~~~~~~~-------~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~ 149 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSP-------QPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGL 149 (372)
T ss_pred EEeeccc-cCHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccc
Confidence 9999997 5777776432 4689999999999999999999985 999999999999999999999999999
Q ss_pred hhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccc
Q 003278 265 ARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQI 344 (834)
Q Consensus 265 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~ 344 (834)
++....... ...+...||+.|+|||.+.....++.++|||||||++|||+||+.||....+....
T Consensus 150 a~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~ 214 (372)
T cd07853 150 ARVEEPDES---------------KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQL 214 (372)
T ss_pred eeecccCcc---------------ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHH
Confidence 975321100 01223458999999999876556789999999999999999999999754322111
Q ss_pred hHHH----------------HHHHHh-hcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 345 ILLD----------------WIRRLS-DEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 345 ~l~~----------------~~~~~~-~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
..+. ...... ......... ..+. .......+.+.+++..|++.||.+||++.++++.
T Consensus 215 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 215 DLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSL-PVLY--TLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCch-HHhc--ccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 1000 000000 000000000 0000 0000112457889999999999999999999864
No 221
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1.6e-36 Score=325.98 Aligned_cols=252 Identities=25% Similarity=0.389 Sum_probs=199.1
Q ss_pred CCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEccCC
Q 003278 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPN 192 (834)
Q Consensus 113 f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 192 (834)
|+..+.||+|+||.||+|....++..+|+|.+........+.|.+|+.+++.++||||++++++|...+..++||||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 45667899999999999999888999999998766656667899999999999999999999999999999999999999
Q ss_pred CCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhh
Q 003278 193 RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHEL 272 (834)
Q Consensus 193 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~ 272 (834)
|+|..++.+. ..+++|..+..++.|+++||.|||+. +|+||||||+|||++.++.+||+|||++.......
T Consensus 87 ~~l~~~~~~~------~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~ 157 (282)
T cd06643 87 GAVDAVMLEL------ERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI 157 (282)
T ss_pred CcHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccccccc
Confidence 9999887642 24689999999999999999999985 99999999999999999999999999987532110
Q ss_pred hhhhhcccccccccccccceeeeccccCCCccccc----cCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHH
Q 003278 273 QYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQ----KGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLD 348 (834)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~----~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~ 348 (834)
.......||+.|+|||++. .+..++.++|||||||++|||++|+.|+....... ....
T Consensus 158 ----------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~--~~~~ 219 (282)
T cd06643 158 ----------------QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMR--VLLK 219 (282)
T ss_pred ----------------cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHH--HHHH
Confidence 0122345899999999874 23356789999999999999999999986432111 1111
Q ss_pred HHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 349 WIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 349 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
... ........+ ..+ ...+.+++..||+.+|.+||++.++++.
T Consensus 220 ----~~~-~~~~~~~~~----~~~----~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 220 ----IAK-SEPPTLAQP----SRW----SSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred ----Hhh-cCCCCCCCc----ccc----CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111 100000000 111 1357889999999999999999998753
No 222
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=9.6e-37 Score=326.39 Aligned_cols=260 Identities=22% Similarity=0.321 Sum_probs=202.3
Q ss_pred hCcCcCCcccccCCcEEEEEEECC------CcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLDN------HQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEML 586 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~~------~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~ 586 (834)
++|...+.||+|+||.||+|...+ +..||+|.+...........|.+|+.++..++||||++++|++......+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~ 85 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL 85 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence 456777889999999999998643 35799999875554455567999999999999999999999999999999
Q ss_pred EEEeccCCCchhhhhhcCCCCC----CCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEee
Q 003278 587 VIYDYSATRILSHLLFHNNHRI----GHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGS 662 (834)
Q Consensus 587 lv~Ey~~~g~L~~~l~~~~~~~----~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~D 662 (834)
+||||+++|+|.+++....... ....++|..++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|
T Consensus 86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~di~p~nill~~~~~~kl~d 162 (277)
T cd05032 86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA---KKFVHRDLAARNCMVAEDLTVKIGD 162 (277)
T ss_pred EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccChheEEEcCCCCEEECC
Confidence 9999999999999987543211 12347899999999999999999996 6999999999999999999999999
Q ss_pred eeeccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHH
Q 003278 663 FALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHE 741 (834)
Q Consensus 663 fGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~ 741 (834)
||+++.+...... .......||..|+|||.+.++.++.++|||||||++|||+| |+.|+....+.. ......
T Consensus 163 fg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~~~~~~- 235 (277)
T cd05032 163 FGMTRDIYETDYY-----RKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE-VLKFVI- 235 (277)
T ss_pred cccchhhccCccc-----ccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH-HHHHHh-
Confidence 9999765432211 11123357889999999998899999999999999999999 888875433322 111111
Q ss_pred HHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHc
Q 003278 742 FEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795 (834)
Q Consensus 742 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~ 795 (834)
..... ...... + ..+.+++.+||+.+|++|||+.+|++.|+
T Consensus 236 ----~~~~~-----~~~~~~-~---~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 236 ----DGGHL-----DLPENC-P---DKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred ----cCCCC-----CCCCCC-C---HHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 11100 111111 2 24556777999999999999999999886
No 223
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.1e-36 Score=342.12 Aligned_cols=216 Identities=25% Similarity=0.342 Sum_probs=173.3
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC---hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEE
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYD 188 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 188 (834)
.|+..++||+|+||.||+|+...+++.||||++.... ....+.+.+|+.++++++|||||+++++|.+.+.+++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5888899999999999999999999999999986532 2334578899999999999999999999999999999999
Q ss_pred ccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhh
Q 003278 189 YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWL 268 (834)
Q Consensus 189 y~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 268 (834)
||++|+|.+++.+. ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+
T Consensus 82 ~~~gg~L~~~l~~~-------~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~ 151 (382)
T cd05625 82 YIPGGDMMSLLIRM-------GIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGF 151 (382)
T ss_pred CCCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCccc
Confidence 99999999998643 3578888899999999999999986 9999999999999999999999999998643
Q ss_pred hhhhhhh---hh----cccc------------------------cccccccccceeeeccccCCCccccccCCCCCcccc
Q 003278 269 EHELQYQ---MR----TSSA------------------------RNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSD 317 (834)
Q Consensus 269 ~~~~~~~---~~----~~~~------------------------~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksD 317 (834)
....... .. .... ..............||+.|+|||.+... .++.++|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~D 230 (382)
T cd05625 152 RWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLCD 230 (382)
T ss_pred cccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCC-CCCCeee
Confidence 2100000 00 0000 0000000012345799999999988654 5789999
Q ss_pred eeehhhHHHHHHhCCccCCCC
Q 003278 318 VFSFGIVVLEVVSGRRAVDLT 338 (834)
Q Consensus 318 V~SfGvvl~ElltG~~p~~~~ 338 (834)
||||||++|||+||+.||...
T Consensus 231 iwSlGvil~elltG~~Pf~~~ 251 (382)
T cd05625 231 WWSVGVILYEMLVGQPPFLAQ 251 (382)
T ss_pred EEechHHHHHHHhCCCCCCCC
Confidence 999999999999999999653
No 224
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.8e-37 Score=344.74 Aligned_cols=195 Identities=24% Similarity=0.309 Sum_probs=167.5
Q ss_pred hcCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEE
Q 003278 109 GSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYD 188 (834)
Q Consensus 109 ~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 188 (834)
..++|+..+.||+|+||.||+|....+++.||+|... .+.+.+|+.++++++|||||++++++...+..++|||
T Consensus 90 ~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e 163 (391)
T PHA03212 90 EKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILP 163 (391)
T ss_pred ccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEe
Confidence 3467999999999999999999999999999999653 2356789999999999999999999999999999999
Q ss_pred ccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhh
Q 003278 189 YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWL 268 (834)
Q Consensus 189 y~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 268 (834)
++. ++|..++... ..+++..++.|+.|++.||.|||+. +|+||||||+|||++.++.+||+|||+|+..
T Consensus 164 ~~~-~~L~~~l~~~-------~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~ 232 (391)
T PHA03212 164 RYK-TDLYCYLAAK-------RNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFP 232 (391)
T ss_pred cCC-CCHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccccc
Confidence 985 7888877542 3578999999999999999999985 9999999999999999999999999999743
Q ss_pred hhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCC
Q 003278 269 EHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVD 336 (834)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~ 336 (834)
.... ........||+.|+|||++... .++.++|||||||++|||+||+.|+-
T Consensus 233 ~~~~---------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~p~~ 284 (391)
T PHA03212 233 VDIN---------------ANKYYGWAGTIATNAPELLARD-PYGPAVDIWSAGIVLFEMATCHDSLF 284 (391)
T ss_pred cccc---------------ccccccccCccCCCChhhhcCC-CCCcHHHHHHHHHHHHHHHHCCCCcC
Confidence 2110 0012345799999999998654 67999999999999999999998764
No 225
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=4.8e-37 Score=331.12 Aligned_cols=264 Identities=20% Similarity=0.330 Sum_probs=202.8
Q ss_pred hCcCcCCcccccCCcEEEEEEEC------CCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLD------NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEML 586 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~ 586 (834)
.+|...+.||+|+||.||++... ++..+|+|.+.... ....+.|.+|++++.+++||||++++++|...+..+
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 83 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 45677788999999999999752 24568899876432 334567999999999999999999999999999999
Q ss_pred EEEeccCCCchhhhhhcCCC-------CCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCce
Q 003278 587 VIYDYSATRILSHLLFHNNH-------RIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPR 659 (834)
Q Consensus 587 lv~Ey~~~g~L~~~l~~~~~-------~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~k 659 (834)
+||||+++++|.+++..... ......++|..++.++.|++.||+|||+ .+|+||||||+|||+++++.+|
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~---~~i~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVK 160 (288)
T ss_pred EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCcEE
Confidence 99999999999999865321 1112348999999999999999999996 6899999999999999999999
Q ss_pred EeeeeeccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHH
Q 003278 660 LGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKR 738 (834)
Q Consensus 660 i~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~ 738 (834)
|+|||+++....... ........|+..|+|||++.+..++.++|||||||++|||+| |..|+....+.. ....
T Consensus 161 l~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~-~~~~ 234 (288)
T cd05093 161 IGDFGMSRDVYSTDY-----YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE-VIEC 234 (288)
T ss_pred eccCCccccccCCce-----eecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHH
Confidence 999999976532211 011122346788999999998899999999999999999999 888875433222 1111
Q ss_pred HHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccCCcc
Q 003278 739 VHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGNDKR 800 (834)
Q Consensus 739 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~~~~ 800 (834)
... .... ......+ ..+.+++.+||+.||.+|||+.+|.+.|+.+.+.
T Consensus 235 i~~-----~~~~-----~~~~~~~----~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 235 ITQ-----GRVL-----QRPRTCP----KEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred HHc-----CCcC-----CCCCCCC----HHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 111 1100 0111122 2456777799999999999999999999877653
No 226
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.7e-37 Score=329.24 Aligned_cols=256 Identities=26% Similarity=0.385 Sum_probs=205.2
Q ss_pred hcCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEE
Q 003278 109 GSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYD 188 (834)
Q Consensus 109 ~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 188 (834)
+..+|+..+.||+|+||.||+|.+.. +..+|+|.+..........+..|+.+++.++||||+++++++...+..++|||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 82 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE 82 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence 44568889999999999999999965 89999999877655556779999999999999999999999999999999999
Q ss_pred ccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhh
Q 003278 189 YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWL 268 (834)
Q Consensus 189 y~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 268 (834)
|+++|+|.+++.... ...++|..+..++.|++.||.|||+. +|+||||||+|||+++++.+||+|||++..+
T Consensus 83 ~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~ 154 (261)
T cd05148 83 LMEKGSLLAFLRSPE-----GQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLI 154 (261)
T ss_pred ecccCCHHHHHhcCC-----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhc
Confidence 999999999996532 24689999999999999999999985 8999999999999999999999999999764
Q ss_pred hhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCccchHH
Q 003278 269 EHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQIILL 347 (834)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~~l~ 347 (834)
..... ......++..|+|||.+..+ .++.++|||||||++|||++ |+.|+..... ....
T Consensus 155 ~~~~~----------------~~~~~~~~~~~~~PE~~~~~-~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~---~~~~ 214 (261)
T cd05148 155 KEDVY----------------LSSDKKIPYKWTAPEAASHG-TFSTKSDVWSFGILLYEMFTYGQVPYPGMNN---HEVY 214 (261)
T ss_pred CCccc----------------cccCCCCceEecCHHHHccC-CCCchhhHHHHHHHHHHHHcCCCCCCCcCCH---HHHH
Confidence 32110 01123367889999988654 67889999999999999999 8888854321 1122
Q ss_pred HHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhc
Q 003278 348 DWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSG 407 (834)
Q Consensus 348 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~ 407 (834)
..+. .+.... . .......+.+++.+||+.+|.+||++.++++.|+.
T Consensus 215 ~~~~----~~~~~~-----~-----~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 215 DQIT----AGYRMP-----C-----PAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred HHHH----hCCcCC-----C-----CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 2211 111110 0 01112467899999999999999999999999874
No 227
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=3.8e-37 Score=332.23 Aligned_cols=263 Identities=25% Similarity=0.390 Sum_probs=201.2
Q ss_pred CCCCCCeeeccCCeEEEEEEECC-----CCeEEEEEEecccC-hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEE
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPS-----DGTVVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLL 185 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~-----~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 185 (834)
+|...+.||+|+||.||+|+... ....+|+|.+.... ....+.+.+|+.+++.++||||++++++|...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 46778899999999999998742 23579999876443 2345678999999999999999999999999999999
Q ss_pred EEEccCCCCHhHHHhcCCCc-----------------cccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCc
Q 003278 186 VYDYMPNRSLDRVLFRRPEN-----------------LEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSN 248 (834)
Q Consensus 186 V~Ey~~~gsL~~~l~~~~~~-----------------~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~N 248 (834)
||||+++|+|.+++...... .....+++|.++..++.|++.||.|||+. +|+||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhhhe
Confidence 99999999999998643211 11224689999999999999999999985 99999999999
Q ss_pred eEECCCCceEEeeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHH
Q 003278 249 VMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEV 328 (834)
Q Consensus 249 ILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~El 328 (834)
||+++++.+||+|||+++.+.....+ .......++..|+|||.+... .++.++|||||||++|||
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~--------------~~~~~~~~~~~y~apE~~~~~-~~~~~~Di~slG~~l~el 222 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSY--------------VKRSKGRIPVKWMAIESLFDH-IYTTQSDVWSFGVLLWEI 222 (290)
T ss_pred EEEcCCCcEEeccccccccccCccch--------------hcccCCCCCccccCHHHHccC-CcchHhHHHHHHHHHHHH
Confidence 99999999999999999754322110 011223467789999987644 678999999999999999
Q ss_pred Hh-CCccCCCCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhc
Q 003278 329 VS-GRRAVDLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSG 407 (834)
Q Consensus 329 lt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~ 407 (834)
+| |+.|+....+ ..+..+ ...+..... . ... ...+.+++..||+.+|.+||++.++++.|+.
T Consensus 223 ~t~g~~p~~~~~~---~~~~~~----~~~~~~~~~-----~-~~~----~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~ 285 (290)
T cd05045 223 VTLGGNPYPGIAP---ERLFNL----LKTGYRMER-----P-ENC----SEEMYNLMLTCWKQEPDKRPTFADISKELEK 285 (290)
T ss_pred HhcCCCCCCCCCH---HHHHHH----HhCCCCCCC-----C-CCC----CHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence 99 9888854321 112222 111111100 0 111 2467889999999999999999999999986
Q ss_pred CC
Q 003278 408 SY 409 (834)
Q Consensus 408 ~~ 409 (834)
.+
T Consensus 286 ~~ 287 (290)
T cd05045 286 MM 287 (290)
T ss_pred HH
Confidence 53
No 228
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=3.5e-37 Score=327.01 Aligned_cols=256 Identities=27% Similarity=0.379 Sum_probs=200.7
Q ss_pred hcCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEE
Q 003278 109 GSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYD 188 (834)
Q Consensus 109 ~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 188 (834)
..++|+..+.||+|+||.||+|.+ .+++.||||.+.... ...+.|.+|+.++++++||||+++++++...+..++|||
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLW-NNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTE 81 (261)
T ss_pred chhheeeEEEecccCCccEEEEEe-cCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeee
Confidence 456788899999999999999998 456789999986543 335678999999999999999999999999999999999
Q ss_pred ccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhh
Q 003278 189 YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWL 268 (834)
Q Consensus 189 y~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 268 (834)
|+++++|.+++.... ...++|..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|||+++.+
T Consensus 82 ~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~ 153 (261)
T cd05068 82 LMKYGSLLEYLQGGA-----GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVI 153 (261)
T ss_pred cccCCcHHHHHhccC-----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEc
Confidence 999999999986532 24689999999999999999999985 9999999999999999999999999999865
Q ss_pred hhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCccchHH
Q 003278 269 EHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQIILL 347 (834)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~~l~ 347 (834)
..... .......++..|+|||++... .++.++|||||||++|||+| |+.|+.... ...+.
T Consensus 154 ~~~~~---------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~t~g~~p~~~~~---~~~~~ 214 (261)
T cd05068 154 KEDIY---------------EAREGAKFPIKWTAPEAALYN-RFSIKSDVWSFGILLTEIVTYGRMPYPGMT---NAEVL 214 (261)
T ss_pred cCCcc---------------cccCCCcCceeccCccccccC-CCCchhhHHHHHHHHHHHHhcCCCCCCCCC---HHHHH
Confidence 32110 001112234689999988654 67899999999999999999 888875321 11111
Q ss_pred HHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhc
Q 003278 348 DWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSG 407 (834)
Q Consensus 348 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~ 407 (834)
.. . ....... . .......+.+++.+|++.+|.+||+|.++++.|+.
T Consensus 215 ~~---~-~~~~~~~-----~-----~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 215 QQ---V-DQGYRMP-----C-----PPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred HH---H-HcCCCCC-----C-----CCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 11 1 1111000 0 00112468899999999999999999999998864
No 229
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=7.7e-37 Score=336.58 Aligned_cols=252 Identities=18% Similarity=0.193 Sum_probs=189.5
Q ss_pred CcCcCCcccccCCcEEEEEEE----CCCcEEEEEEecCCC---ChhHHHHHHHHHHHHHhc-cCCCceeEEEEEeeCCeE
Q 003278 514 NFSESQRVAEMDFGTAYQGFL----DNHQYVLVKRLGMSK---CPALRTRFSNELQNLARL-RHRNLVQLCGWCTEQGEM 585 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~----~~~~~vavK~~~~~~---~~~~~~~f~~E~~~l~~l-~HpNiv~l~g~~~~~~~~ 585 (834)
+|...+.||+|+||.||++.. .++..||+|.+.... .....+.+.+|+.++.++ +||||+++++++.+.+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 356677899999999999875 357899999986321 222345688899999999 599999999999999999
Q ss_pred EEEEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeee
Q 003278 586 LVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFAL 665 (834)
Q Consensus 586 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGl 665 (834)
++||||+++|+|.+++.... .+++.....++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nili~~~~~~kl~DfG~ 151 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRD------NFSEDEVRFYSGEIILALEHLHK---LGIVYRDIKLENILLDSEGHVVLTDFGL 151 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHeEECCCCCEEEeeCcC
Confidence 99999999999999886532 37888888999999999999996 6899999999999999999999999999
Q ss_pred ccccccCCCCCcccccCccccccccCccchhccccC-CCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHh
Q 003278 666 AEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESG-EATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEA 744 (834)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~-~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~ 744 (834)
++....... .......||+.|||||++.+. .++.++|||||||++|||+||+.||..................
T Consensus 152 ~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~ 225 (332)
T cd05614 152 SKEFLSEEK------ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK 225 (332)
T ss_pred CccccccCC------CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc
Confidence 975432211 112346799999999999765 4788999999999999999999998643221111111111111
Q ss_pred hcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCC-----ChhHHHH
Q 003278 745 RKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRP-----SMRQILS 792 (834)
Q Consensus 745 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RP-----tm~~v~~ 792 (834)
. ++.+....+ .. +..++.+||+.||++|| ++.++++
T Consensus 226 ~--------~~~~~~~~~-~~---~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 226 C--------DPPFPSFIG-PE---AQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred C--------CCCCCCCCC-HH---HHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 0 111111222 23 34555689999999999 5556653
No 230
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1e-36 Score=334.28 Aligned_cols=242 Identities=19% Similarity=0.216 Sum_probs=187.7
Q ss_pred CcccccCCcEEEEEEE----CCCcEEEEEEecCCC---ChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEec
Q 003278 519 QRVAEMDFGTAYQGFL----DNHQYVLVKRLGMSK---CPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY 591 (834)
Q Consensus 519 ~~ig~g~~g~vy~~~~----~~~~~vavK~~~~~~---~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey 591 (834)
+.||+|+||.||++.. .+++.||||.+.... .......+.+|+.+|++++||||+++++++...+..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5699999999999985 357889999986421 122335678899999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccccc
Q 003278 592 SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTR 671 (834)
Q Consensus 592 ~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~ 671 (834)
+++|+|..++...+ .+.+.....++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 82 ~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 152 (323)
T cd05584 82 LSGGELFMHLEREG------IFMEDTACFYLSEISLALEHLHQ---QGIIYRDLKPENILLDAQGHVKLTDFGLCKESIH 152 (323)
T ss_pred CCCchHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEeeCcCCeeccc
Confidence 99999999886532 36677778899999999999996 6999999999999999999999999999875322
Q ss_pred CCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCcccc
Q 003278 672 NDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAE 751 (834)
Q Consensus 672 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (834)
.. .......||+.|||||++.+..++.++|||||||++|||+||+.||........ ..........
T Consensus 153 ~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~----~~~~~~~~~~--- 218 (323)
T cd05584 153 EG-------TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKT----IDKILKGKLN--- 218 (323)
T ss_pred CC-------CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHH----HHHHHcCCCC---
Confidence 11 112345799999999999988899999999999999999999999864332211 1111111111
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhccCCCCCCC-----ChhHHHH
Q 003278 752 LVDLSLNGEYNHKELMRLIKLGIACTLSNPELRP-----SMRQILS 792 (834)
Q Consensus 752 ~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RP-----tm~~v~~ 792 (834)
+.... ..+ +..++.+||+.+|++|| ++.++++
T Consensus 219 -----~~~~~-~~~---~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 219 -----LPPYL-TPE---ARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred -----CCCCC-CHH---HHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 11111 223 44555689999999999 6777654
No 231
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=4.2e-37 Score=333.12 Aligned_cols=261 Identities=28% Similarity=0.416 Sum_probs=199.7
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCe--EEEEEEeccc-ChhhHHHHHHHHHHHHhC-CCCceeeEeeeEEeCCEEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGT--VVAVKCLAEK-GERFEKTFAAELVAVAHL-RHRNLVRLRGWCVHEDQLLLV 186 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~--~vAvK~l~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~lV 186 (834)
++|+..+.||+|+||.||+|.+..++. .+|+|.++.. .....+.|.+|+.++.++ +||||+++++++...+..++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 568888999999999999999877664 4788887642 334456789999999999 799999999999999999999
Q ss_pred EEccCCCCHhHHHhcCCCcc---------ccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCce
Q 003278 187 YDYMPNRSLDRVLFRRPENL---------EAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNA 257 (834)
Q Consensus 187 ~Ey~~~gsL~~~l~~~~~~~---------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~ 257 (834)
|||+++|+|.+++....... .....+++..+..|+.|++.||+|||+. +|+||||||+|||++.++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCCeE
Confidence 99999999999996532110 1124589999999999999999999985 99999999999999999999
Q ss_pred EEeeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCC
Q 003278 258 RLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVD 336 (834)
Q Consensus 258 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~ 336 (834)
||+|||++....... ......++..|+|||++... .++.++|||||||++|||+| |+.||.
T Consensus 159 kl~dfg~~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwSlG~il~el~t~g~~pf~ 220 (297)
T cd05089 159 KIADFGLSRGEEVYV-----------------KKTMGRLPVRWMAIESLNYS-VYTTKSDVWSFGVLLWEIVSLGGTPYC 220 (297)
T ss_pred EECCcCCCcccccee-----------------ccCCCCcCccccCchhhccC-CCCchhhHHHHHHHHHHHHcCCCCCCC
Confidence 999999986321100 01111235679999988654 57899999999999999998 999986
Q ss_pred CCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcCC
Q 003278 337 LTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGSY 409 (834)
Q Consensus 337 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~~ 409 (834)
..... .+.... ..+.. .... ... ...+.+++..||+.+|.+||++.++++.|....
T Consensus 221 ~~~~~------~~~~~~-~~~~~-----~~~~-~~~----~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~ 276 (297)
T cd05089 221 GMTCA------ELYEKL-PQGYR-----MEKP-RNC----DDEVYELMRQCWRDRPYERPPFAQISVQLSRML 276 (297)
T ss_pred CCCHH------HHHHHH-hcCCC-----CCCC-CCC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 43221 111111 11110 0010 111 135788999999999999999999999887643
No 232
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=9.7e-37 Score=325.30 Aligned_cols=259 Identities=21% Similarity=0.285 Sum_probs=195.9
Q ss_pred CcCCcccccCCcEEEEEEECC----CcEEEEEEecCCCC-hhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCe------
Q 003278 516 SESQRVAEMDFGTAYQGFLDN----HQYVLVKRLGMSKC-PALRTRFSNELQNLARLRHRNLVQLCGWCTEQGE------ 584 (834)
Q Consensus 516 ~~~~~ig~g~~g~vy~~~~~~----~~~vavK~~~~~~~-~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~------ 584 (834)
...+.||+|+||.||+|.... +..||||++..... ......|.+|+..++.++||||++++|++.+.+.
T Consensus 2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 81 (273)
T cd05035 2 KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPK 81 (273)
T ss_pred ccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcc
Confidence 345779999999999998643 36799999875433 3344679999999999999999999999876554
Q ss_pred EEEEEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeee
Q 003278 585 MLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFA 664 (834)
Q Consensus 585 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfG 664 (834)
.+++|||+++|+|..++...........+++.....++.|++.||+|||+ .+|+||||||+||++++++.+||+|||
T Consensus 82 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg 158 (273)
T cd05035 82 PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSN---RNFIHRDLAARNCMLREDMTVCVADFG 158 (273)
T ss_pred cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchheEEECCCCeEEECCcc
Confidence 79999999999999988654322222358899999999999999999996 689999999999999999999999999
Q ss_pred eccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHH
Q 003278 665 LAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFE 743 (834)
Q Consensus 665 la~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~ 743 (834)
+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..|+....+ .........
T Consensus 159 ~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~-~~~~~~~~~-- 230 (273)
T cd05035 159 LSKKIYSGDYY-----RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN-HEIYDYLRH-- 230 (273)
T ss_pred ceeeccccccc-----cccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHc--
Confidence 99865432210 01112235678999999988899999999999999999999 7777754322 222121111
Q ss_pred hhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccC
Q 003278 744 ARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGN 797 (834)
Q Consensus 744 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~ 797 (834)
... . .....+ ...+.+++.+||+.||++|||+.+|++.|+.+
T Consensus 231 --~~~-~-----~~~~~~----~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 231 --GNR-L-----KQPEDC----LDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred --CCC-C-----CCCcCC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 011 0 011111 22456677799999999999999999998653
No 233
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=8.6e-37 Score=328.72 Aligned_cols=252 Identities=15% Similarity=0.206 Sum_probs=193.3
Q ss_pred CcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCCC--hhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEe
Q 003278 514 NFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKC--PALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYD 590 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~--~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~E 590 (834)
+|...+.||+|+||.||++.. .++..||||.+..... ......+.+|+.++++++|||||++++++.+.+..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 356677899999999999986 4688999999864322 2233567889999999999999999999999999999999
Q ss_pred ccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccc
Q 003278 591 YSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLT 670 (834)
Q Consensus 591 y~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~ 670 (834)
|+++|+|..++..... ..+++.....++.|++.||+|||+ .+|+||||||+||++++++.++|+|||+++...
T Consensus 81 ~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 153 (285)
T cd05605 81 LMNGGDLKFHIYNMGN----PGFDEERAVFYAAEITCGLEDLHR---ERIVYRDLKPENILLDDYGHIRISDLGLAVEIP 153 (285)
T ss_pred ccCCCcHHHHHHhcCc----CCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHEEECCCCCEEEeeCCCceecC
Confidence 9999999988764321 248899999999999999999997 689999999999999999999999999997643
Q ss_pred cCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCccc
Q 003278 671 RNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLA 750 (834)
Q Consensus 671 ~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (834)
... ......||+.|||||++.+..++.++|||||||++|||++|+.||......... ..+..... ...
T Consensus 154 ~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~-~~~~~~~~-~~~-- 221 (285)
T cd05605 154 EGE--------TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKR-EEVERRVK-EDQ-- 221 (285)
T ss_pred CCC--------ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHH-HHHHHHhh-hcc--
Confidence 211 112357899999999999889999999999999999999999999754322111 11111100 000
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhccCCCCCCC-----ChhHHHH
Q 003278 751 ELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRP-----SMRQILS 792 (834)
Q Consensus 751 ~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RP-----tm~~v~~ 792 (834)
......++ ..+.+++.+||+.||++|| ++.++.+
T Consensus 222 ----~~~~~~~~----~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 222 ----EEYSEKFS----EAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred ----cccCcccC----HHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 00111111 2345666799999999999 5666643
No 234
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.2e-36 Score=323.61 Aligned_cols=262 Identities=23% Similarity=0.364 Sum_probs=207.2
Q ss_pred cCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc---ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEE
Q 003278 110 SNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK---GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLV 186 (834)
Q Consensus 110 t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 186 (834)
+++|+..+.||+|+||.||+|....+|+.||+|.++.. .....+.+.+|+.++++++|+||+++++++...+..++|
T Consensus 1 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv 80 (267)
T cd08224 1 LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIV 80 (267)
T ss_pred CCceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 36789999999999999999999889999999987532 233456789999999999999999999999999999999
Q ss_pred EEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchh
Q 003278 187 YDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266 (834)
Q Consensus 187 ~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 266 (834)
|||+++|+|..++..... ....+++.++..++.+++.||.|||+. +|+||||||+||+++.++.++|+|||+++
T Consensus 81 ~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~ 154 (267)
T cd08224 81 LELADAGDLSRMIKHFKK---QKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGR 154 (267)
T ss_pred EecCCCCCHHHHHHHhcc---cCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceee
Confidence 999999999998864321 234689999999999999999999985 99999999999999999999999999987
Q ss_pred hhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchH
Q 003278 267 WLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346 (834)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l 346 (834)
.+.... .......|++.|+|||.+... .++.++|||||||++|||++|+.|+.... ..+
T Consensus 155 ~~~~~~----------------~~~~~~~~~~~y~apE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~ 213 (267)
T cd08224 155 FFSSKT----------------TAAHSLVGTPYYMSPERIHEN-GYNFKSDIWSLGCLLYEMAALQSPFYGDK----MNL 213 (267)
T ss_pred eccCCC----------------cccceecCCccccCHHHhccC-CCCchhcHHHHHHHHHHHHHCCCCcccCC----ccH
Confidence 543210 012234588999999988644 57889999999999999999999985332 222
Q ss_pred HHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcC
Q 003278 347 LDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGS 408 (834)
Q Consensus 347 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~ 408 (834)
..+..... .+... ... .......+.+++..||..+|++||++.+|++.|+..
T Consensus 214 ~~~~~~~~-~~~~~-----~~~----~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~ 265 (267)
T cd08224 214 YSLCKKIE-KCDYP-----PLP----ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM 265 (267)
T ss_pred HHHHhhhh-cCCCC-----CCC----hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence 22222211 11111 111 001224578899999999999999999999998754
No 235
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1e-36 Score=323.36 Aligned_cols=254 Identities=20% Similarity=0.297 Sum_probs=190.4
Q ss_pred CcccccCCcEEEEEEECC----CcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEe-eCCeEEEEEeccC
Q 003278 519 QRVAEMDFGTAYQGFLDN----HQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCT-EQGEMLVIYDYSA 593 (834)
Q Consensus 519 ~~ig~g~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~-~~~~~~lv~Ey~~ 593 (834)
+.||+|+||.||+|...+ ...||+|++.........+.|.+|+.+++.++||||++++++|. .++..++||||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 368999999999998532 35799998865444445578899999999999999999999876 4556889999999
Q ss_pred CCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCC
Q 003278 594 TRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRND 673 (834)
Q Consensus 594 ~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~ 673 (834)
+|+|.+++..... .+.+..++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++.+....
T Consensus 81 ~~~L~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~ 152 (262)
T cd05058 81 HGDLRNFIRSETH-----NPTVKDLIGFGLQVAKGMEYLAS---KKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKE 152 (262)
T ss_pred CCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCccccccccCCc
Confidence 9999999865322 25677788999999999999996 699999999999999999999999999997543221
Q ss_pred CCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCcccccc
Q 003278 674 HGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELV 753 (834)
Q Consensus 674 ~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (834)
.. .........++..|+|||++.+..++.++|||||||++|||+||..|+............+ .....+
T Consensus 153 ~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~---~~~~~~----- 221 (262)
T cd05058 153 YY---SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYL---LQGRRL----- 221 (262)
T ss_pred ce---eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH---hcCCCC-----
Confidence 10 0011123456788999999998899999999999999999999655543222222111111 111000
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccC
Q 003278 754 DLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGN 797 (834)
Q Consensus 754 d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~ 797 (834)
... ...+ ..+.+++.+||+.+|++||++.+|++.|+..
T Consensus 222 --~~~-~~~~---~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~ 259 (262)
T cd05058 222 --LQP-EYCP---DPLYEVMLSCWHPKPEMRPTFSELVSRIEQI 259 (262)
T ss_pred --CCC-CcCC---HHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 001 1112 2456677799999999999999999998754
No 236
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=2.7e-37 Score=337.73 Aligned_cols=241 Identities=22% Similarity=0.281 Sum_probs=188.1
Q ss_pred CeeeccCCeEEEEEEECCCCeEEEEEEecccC---hhhHHHHHHHHHHHHh-CCCCceeeEeeeEEeCCEEEEEEEccCC
Q 003278 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAELVAVAH-LRHRNLVRLRGWCVHEDQLLLVYDYMPN 192 (834)
Q Consensus 117 ~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~-l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 192 (834)
++||+|+||.||+|.+..+|..||||+++... ....+.+..|..++.. ++||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 47999999999999999899999999986532 2233456678877765 5899999999999999999999999999
Q ss_pred CCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhh
Q 003278 193 RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHEL 272 (834)
Q Consensus 193 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~ 272 (834)
|+|..++... ..+++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 81 g~L~~~i~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 149 (316)
T cd05620 81 GDLMFHIQDK-------GRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG- 149 (316)
T ss_pred CcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccC-
Confidence 9999888543 3578889999999999999999985 9999999999999999999999999998632110
Q ss_pred hhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHHHH
Q 003278 273 QYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIRR 352 (834)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~~~ 352 (834)
....+...||+.|+|||.+... .++.++|||||||++|||+||+.||..... ..+.. .
T Consensus 150 ---------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~el~~g~~Pf~~~~~---~~~~~---~ 207 (316)
T cd05620 150 ---------------DNRASTFCGTPDYIAPEILQGL-KYTFSVDWWSFGVLLYEMLIGQSPFHGDDE---DELFE---S 207 (316)
T ss_pred ---------------CCceeccCCCcCccCHHHHcCC-CCCcccchhhhHHHHHHHHhCCCCCCCCCH---HHHHH---H
Confidence 0113456799999999998654 678999999999999999999999864321 11111 1
Q ss_pred HhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchh-hHH
Q 003278 353 LSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMK-WVI 402 (834)
Q Consensus 353 ~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~-~V~ 402 (834)
+.. + .+.+. ... ...+.++...||+.||.+||++. ++.
T Consensus 208 ~~~-~------~~~~~-~~~----~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 208 IRV-D------TPHYP-RWI----TKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred HHh-C------CCCCC-CCC----CHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 111 1 01111 111 13567899999999999999984 444
No 237
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=7.3e-37 Score=327.32 Aligned_cols=262 Identities=25% Similarity=0.400 Sum_probs=203.8
Q ss_pred cCCCCCCCeeeccCCeEEEEEEECCC-----CeEEEEEEecccC-hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEE
Q 003278 110 SNGFDEDEVLGSGGFGKVYRAVLPSD-----GTVVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQL 183 (834)
Q Consensus 110 t~~f~~~~~LG~G~fG~Vy~~~~~~~-----g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~ 183 (834)
.++|...+.||+|+||.||+|..... +..||+|.+.... ......|.+|+.++..++||||+++++++...+..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 46788899999999999999987533 4789999986442 23456788999999999999999999999999999
Q ss_pred EEEEEccCCCCHhHHHhcCCCcc---ccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEe
Q 003278 184 LLVYDYMPNRSLDRVLFRRPENL---EAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLG 260 (834)
Q Consensus 184 ~lV~Ey~~~gsL~~~l~~~~~~~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~ 260 (834)
++||||+++|+|.+++....... .....++|..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEEEC
Confidence 99999999999999997543211 1234589999999999999999999985 99999999999999999999999
Q ss_pred eccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCC
Q 003278 261 DFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTY 339 (834)
Q Consensus 261 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~ 339 (834)
|||+++.+...... ...+...||..|+|||.+..+ .++.++|||||||++||++| |+.|+....
T Consensus 162 dfg~~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~el~t~g~~p~~~~~ 226 (277)
T cd05032 162 DFGMTRDIYETDYY--------------RKGGKGLLPVRWMAPESLKDG-VFTTKSDVWSFGVVLWEMATLAEQPYQGLS 226 (277)
T ss_pred CcccchhhccCccc--------------ccCCCCCccccccCHHHHhcC-CCCcccchHHHHHHHHHhhccCCCCCccCC
Confidence 99999754322110 012233478899999988655 57899999999999999998 888875322
Q ss_pred CCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhh
Q 003278 340 PDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVS 406 (834)
Q Consensus 340 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~ 406 (834)
. ..+..++. .+...... ... ...+.+++..||+.+|.+||++.++++.|+
T Consensus 227 ~---~~~~~~~~----~~~~~~~~------~~~----~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 227 N---EEVLKFVI----DGGHLDLP------ENC----PDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred H---HHHHHHHh----cCCCCCCC------CCC----CHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 1 11222221 12111111 111 346889999999999999999999998875
No 238
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.5e-36 Score=328.30 Aligned_cols=269 Identities=22% Similarity=0.332 Sum_probs=202.6
Q ss_pred cCCCCCCCeeeccCCeEEEEEEECCC----------------CeEEEEEEecccC-hhhHHHHHHHHHHHHhCCCCceee
Q 003278 110 SNGFDEDEVLGSGGFGKVYRAVLPSD----------------GTVVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLVR 172 (834)
Q Consensus 110 t~~f~~~~~LG~G~fG~Vy~~~~~~~----------------g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~ 172 (834)
..+|+..+.||+|+||.||+|.+... +..||+|.+.... ....+.|.+|+.++.+++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 35688899999999999999987543 3568999987543 345677899999999999999999
Q ss_pred EeeeEEeCCEEEEEEEccCCCCHhHHHhcCCCcc----ccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCc
Q 003278 173 LRGWCVHEDQLLLVYDYMPNRSLDRVLFRRPENL----EAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSN 248 (834)
Q Consensus 173 l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~----~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~N 248 (834)
++++|..++..++||||+++++|..++....... .....+++..+..++.|++.||+|||+. +|+||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchhc
Confidence 9999999999999999999999999997543110 1123689999999999999999999985 99999999999
Q ss_pred eEECCCCceEEeeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHH
Q 003278 249 VMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEV 328 (834)
Q Consensus 249 ILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~El 328 (834)
||++.++.++|+|||+++.+...... .......+|+.|+|||++..+ .++.++|||||||++|||
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el 225 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYY--------------RVQGRAPLPIRWMAWESVLLG-KFTTKSDVWAFGVTLWEI 225 (296)
T ss_pred eeecCCCceEEccccceeecccCcce--------------eecCcCCCCceecCHHHhhcC-CCCccchhhhhHHHHHHH
Confidence 99999999999999998754221100 012234467899999988654 579999999999999999
Q ss_pred Hh--CCccCCCCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhh
Q 003278 329 VS--GRRAVDLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVS 406 (834)
Q Consensus 329 lt--G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~ 406 (834)
++ |..|+.... .......+............... .......+.+++..||+.+|.+||++.+|++.|+
T Consensus 226 ~~~~~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 226 LTLCREQPYEHLT---DQQVIENAGHFFRDDGRQIYLPR-------PPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred HhcCCCCCCCCcC---hHHHHHHHHhccccccccccCCC-------ccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 98 555654321 11122222222111111111100 0011246889999999999999999999999875
No 239
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.1e-36 Score=336.73 Aligned_cols=263 Identities=21% Similarity=0.294 Sum_probs=198.1
Q ss_pred hCcCcCCcccccCCcEEEEEEE------CCCcEEEEEEecCCCChhHHHHHHHHHHHHHhc-cCCCceeEEEEEeeC-Ce
Q 003278 513 NNFSESQRVAEMDFGTAYQGFL------DNHQYVLVKRLGMSKCPALRTRFSNELQNLARL-RHRNLVQLCGWCTEQ-GE 584 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l-~HpNiv~l~g~~~~~-~~ 584 (834)
++|...+.||+|+||.||+|.. .++..||||.+...........+.+|+.+|.++ +|||||+++++|... ..
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 86 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence 4577788999999999999973 346789999987654444456788999999999 689999999988654 46
Q ss_pred EEEEEeccCCCchhhhhhcCCCCC--------------------------------------------------------
Q 003278 585 MLVIYDYSATRILSHLLFHNNHRI-------------------------------------------------------- 608 (834)
Q Consensus 585 ~~lv~Ey~~~g~L~~~l~~~~~~~-------------------------------------------------------- 608 (834)
.++||||+++|+|.+++.......
T Consensus 87 ~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (343)
T cd05103 87 LMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA 166 (343)
T ss_pred eEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhh
Confidence 789999999999999986532100
Q ss_pred -----CCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCCCCcccccCc
Q 003278 609 -----GHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGN 683 (834)
Q Consensus 609 -----~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~~~~~ 683 (834)
....++|..++.++.|+++||+|||+ .+|+||||||+|||+++++.+||+|||++......... ...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-----~~~ 238 (343)
T cd05103 167 EQEDLYKKVLTLEDLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY-----VRK 238 (343)
T ss_pred hhhhhhhccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCccCeEEEcCCCcEEEEecccccccccCcch-----hhc
Confidence 01247888899999999999999996 69999999999999999999999999999764322110 111
Q ss_pred cccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcCccccccccccCCCCC
Q 003278 684 RSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYN 762 (834)
Q Consensus 684 ~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 762 (834)
....+++.|||||++.+..++.++|||||||++|||++ |..|+............... ... . ......+
T Consensus 239 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~---~~~--~-----~~~~~~~ 308 (343)
T cd05103 239 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE---GTR--M-----RAPDYTT 308 (343)
T ss_pred CCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhc---cCC--C-----CCCCCCC
Confidence 22356778999999998899999999999999999997 88887543222222111111 000 0 0011111
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccC
Q 003278 763 HKELMRLIKLGIACTLSNPELRPSMRQILSILDGN 797 (834)
Q Consensus 763 ~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~ 797 (834)
..+.+++.+||+.||++|||+.+|++.|+..
T Consensus 309 ----~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~ 339 (343)
T cd05103 309 ----PEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 339 (343)
T ss_pred ----HHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 2466777899999999999999999998653
No 240
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=5.7e-37 Score=328.93 Aligned_cols=264 Identities=23% Similarity=0.280 Sum_probs=204.3
Q ss_pred hCcCcCCcccccCCcEEEEEEECC-----CcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEee-CCeEE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLDN-----HQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTE-QGEML 586 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~~-----~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~-~~~~~ 586 (834)
++|...+.||+|+||.||+|...+ +..|++|++.........+.+.+|+.++++++||||++++|++.. ....+
T Consensus 6 ~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 85 (280)
T cd05043 6 DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPF 85 (280)
T ss_pred hheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCE
Confidence 467777889999999999999765 678999998765555556789999999999999999999998876 46789
Q ss_pred EEEeccCCCchhhhhhcCCCC--CCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeee
Q 003278 587 VIYDYSATRILSHLLFHNNHR--IGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFA 664 (834)
Q Consensus 587 lv~Ey~~~g~L~~~l~~~~~~--~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfG 664 (834)
+++||+++|+|..++...... .....+++..+..++.|++.||+|||+ .+++||||||+|||+++++.+||+|||
T Consensus 86 ~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kl~d~g 162 (280)
T cd05043 86 VLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHK---RGVIHKDIAARNCVIDEELQVKITDNA 162 (280)
T ss_pred EEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCHhhEEEcCCCcEEECCCC
Confidence 999999999999998654221 112458999999999999999999996 699999999999999999999999999
Q ss_pred eccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHH
Q 003278 665 LAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFE 743 (834)
Q Consensus 665 la~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~ 743 (834)
+++.+...... .......++..|+|||++.+..++.++|||||||++||++| |+.|+....+.. .....
T Consensus 163 ~~~~~~~~~~~-----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~~~~~---- 232 (280)
T cd05043 163 LSRDLFPMDYH-----CLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFE-MAAYL---- 232 (280)
T ss_pred CcccccCCceE-----EeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHH-HHHHH----
Confidence 99865332210 01122356778999999998889999999999999999999 999986543322 11111
Q ss_pred hhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccCCc
Q 003278 744 ARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGNDK 799 (834)
Q Consensus 744 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~~~ 799 (834)
....... ..... ++ .+.+++.+||..||++|||+.+|++.|+.+.+
T Consensus 233 ~~~~~~~------~~~~~-~~---~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 233 KDGYRLA------QPINC-PD---ELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred HcCCCCC------CCCcC-CH---HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 1111100 00111 22 45567779999999999999999999976543
No 241
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.7e-37 Score=337.15 Aligned_cols=248 Identities=24% Similarity=0.373 Sum_probs=203.0
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC---hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEE
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYD 188 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 188 (834)
-|..++.||.|+-|.|-.|++..+|+.+|||++.+.. +.......+|+.+|+-+.||||++||+.+.+...+|||.|
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlE 92 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLE 92 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEE
Confidence 3777899999999999999999999999999987652 2334567899999999999999999999999999999999
Q ss_pred ccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhh
Q 003278 189 YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWL 268 (834)
Q Consensus 189 y~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 268 (834)
|+++|.|.++|.++ ++|+.....+++.||+.|+.|||.. +|+||||||+|+|||..+++||+|||+|.+-
T Consensus 93 yv~gGELFdylv~k-------G~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe 162 (786)
T KOG0588|consen 93 YVPGGELFDYLVRK-------GPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLE 162 (786)
T ss_pred ecCCchhHHHHHhh-------CCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeecc
Confidence 99999999999764 5788899999999999999999996 9999999999999999999999999999753
Q ss_pred hhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHH
Q 003278 269 EHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLD 348 (834)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~ 348 (834)
..+. --.+-||+|.|.|||.+....+...++||||.|||||-||||+-||+. ++-..|+.
T Consensus 163 ~~gk-----------------lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD---dNir~LLl 222 (786)
T KOG0588|consen 163 VPGK-----------------LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD---DNIRVLLL 222 (786)
T ss_pred cCCc-----------------cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC---ccHHHHHH
Confidence 2211 123457999999999998877788999999999999999999999972 22112222
Q ss_pred HHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 349 WIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 349 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
-+ ..|. .++.+. .. ....+|....+..||..|-+|.+|.+.
T Consensus 223 KV----~~G~-f~MPs~------Is----~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 223 KV----QRGV-FEMPSN------IS----SEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred HH----HcCc-ccCCCc------CC----HHHHHHHHHHhccCccccccHHHHhhC
Confidence 11 1221 122111 11 235567778889999999999999985
No 242
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=4.5e-36 Score=330.26 Aligned_cols=203 Identities=26% Similarity=0.350 Sum_probs=172.2
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc---ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK---GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVY 187 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 187 (834)
++|+..+.||+|+||.||++....+++.||||++.+. .....+.|.+|+.++..++|+||+++++++.+++.+|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 4688899999999999999999889999999998642 1223456888999999999999999999999999999999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhh
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARW 267 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 267 (834)
||+++|+|.+++.+. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 81 e~~~g~~L~~~l~~~------~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~ 151 (331)
T cd05597 81 DYYVGGDLLTLLSKF------EDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLR 151 (331)
T ss_pred ecCCCCcHHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceee
Confidence 999999999998642 23578889999999999999999986 999999999999999999999999999865
Q ss_pred hhhhhhhhhhcccccccccccccceeeeccccCCCcccccc----CCCCCcccceeehhhHHHHHHhCCccCCC
Q 003278 268 LEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQK----GSVATAKSDVFSFGIVVLEVVSGRRAVDL 337 (834)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~----~~~~~~ksDV~SfGvvl~ElltG~~p~~~ 337 (834)
+..... .......||+.|||||++.. ...++.++|||||||++|||++|+.||..
T Consensus 152 ~~~~~~---------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 210 (331)
T cd05597 152 LLADGT---------------VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred cCCCCC---------------ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCC
Confidence 322100 01223469999999999863 23468899999999999999999999864
No 243
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=7.4e-37 Score=326.11 Aligned_cols=258 Identities=23% Similarity=0.324 Sum_probs=191.5
Q ss_pred CeeeccCCeEEEEEEECC--CCeEEEEEEecccC-hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEccCCC
Q 003278 117 EVLGSGGFGKVYRAVLPS--DGTVVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNR 193 (834)
Q Consensus 117 ~~LG~G~fG~Vy~~~~~~--~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 193 (834)
+.||+|+||.||+|.+.. ++..+|+|.+.... ......|.+|+.++++++||||++++|+|.+.+..++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 368999999999998643 34679999886543 234457899999999999999999999999999999999999999
Q ss_pred CHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhhh
Q 003278 194 SLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQ 273 (834)
Q Consensus 194 sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~ 273 (834)
+|.+++...... ....+++..+..++.|++.||+|||+. +++||||||+|||++.++.+||+|||+++.......
T Consensus 81 ~L~~~l~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~ 155 (269)
T cd05087 81 DLKGYLRSCRKA--ELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY 155 (269)
T ss_pred cHHHHHHHhhhc--ccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCcce
Confidence 999999754221 123567888899999999999999985 999999999999999999999999999874322110
Q ss_pred hhhhcccccccccccccceeeeccccCCCccccccC------CCCCcccceeehhhHHHHHHh-CCccCCCCCCCccchH
Q 003278 274 YQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKG------SVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQIIL 346 (834)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~------~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~~l 346 (834)
........|+..|+|||++... ..++.++|||||||++|||++ |+.||......+ .
T Consensus 156 --------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~---~ 218 (269)
T cd05087 156 --------------YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQ---V 218 (269)
T ss_pred --------------eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHH---H
Confidence 0012234578899999988532 124789999999999999996 999986432211 1
Q ss_pred HHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhh
Q 003278 347 LDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVS 406 (834)
Q Consensus 347 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~ 406 (834)
.... ..+......++.+. ....+.+..++..|+ .+|++||++.+|+..|+
T Consensus 219 ~~~~----~~~~~~~~~~~~~~-----~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 219 LTYT----VREQQLKLPKPRLK-----LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred HHHH----hhcccCCCCCCccC-----CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 1111 01111112222221 111234677888998 58999999999998874
No 244
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=4.5e-37 Score=330.21 Aligned_cols=261 Identities=26% Similarity=0.380 Sum_probs=199.7
Q ss_pred CCCCCCeeeccCCeEEEEEEECC-----CCeEEEEEEecccCh-hhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEE
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPS-----DGTVVAVKCLAEKGE-RFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLL 185 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~-----~g~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 185 (834)
+|...+.||+|+||.||+|.... ++..||||++..... ...+.|.+|+.++.+++||||+++++++...+..++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 46667899999999999998743 357899999875432 345678899999999999999999999999999999
Q ss_pred EEEccCCCCHhHHHhcCCCc---------cccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCc
Q 003278 186 VYDYMPNRSLDRVLFRRPEN---------LEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYN 256 (834)
Q Consensus 186 V~Ey~~~gsL~~~l~~~~~~---------~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~ 256 (834)
++||+++++|..++...... ......+++..+..++.|++.||.|||+. +|+||||||+|||+++++.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCCCc
Confidence 99999999999998533210 01124588999999999999999999985 9999999999999999999
Q ss_pred eEEeeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccC
Q 003278 257 ARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAV 335 (834)
Q Consensus 257 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~ 335 (834)
+||+|||+++.+...... .......+++.|+|||.+..+ .++.++|||||||++|||+| |..|+
T Consensus 163 ~kl~Dfg~~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~~g~~p~ 227 (283)
T cd05091 163 VKISDLGLFREVYAADYY--------------KLMGNSLLPIRWMSPEAIMYG-KFSIDSDIWSYGVVLWEVFSYGLQPY 227 (283)
T ss_pred eEecccccccccccchhe--------------eeccCccCCccccCHHHHhcC-CCCcchhHHHHHHHHHHHHcCCCCCC
Confidence 999999998854321100 011223467899999998655 57899999999999999998 77777
Q ss_pred CCCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhc
Q 003278 336 DLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSG 407 (834)
Q Consensus 336 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~ 407 (834)
..... ..+..... .+..... . .. ....+..++..||+.+|.+||+|.+|+..|..
T Consensus 228 ~~~~~------~~~~~~i~-~~~~~~~-----~-~~----~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 228 CGYSN------QDVIEMIR-NRQVLPC-----P-DD----CPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred CCCCH------HHHHHHHH-cCCcCCC-----C-CC----CCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 53211 11222211 1211111 0 11 12457899999999999999999999998853
No 245
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=8.9e-37 Score=333.96 Aligned_cols=242 Identities=24% Similarity=0.322 Sum_probs=191.3
Q ss_pred CeeeccCCeEEEEEEECCCCeEEEEEEecccC---hhhHHHHHHHHHHHHhC-CCCceeeEeeeEEeCCEEEEEEEccCC
Q 003278 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAELVAVAHL-RHRNLVRLRGWCVHEDQLLLVYDYMPN 192 (834)
Q Consensus 117 ~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 192 (834)
+.||+|+||.||+|.+..++..||||++.... ......+..|..++..+ +||||+++++++...+.+++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 47999999999999998889999999987532 23345677888888887 799999999999999999999999999
Q ss_pred CCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhh
Q 003278 193 RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHEL 272 (834)
Q Consensus 193 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~ 272 (834)
|+|..++... ..+++..+..++.|++.||.|||+. +|+||||||+|||+++++.+||+|||+++.....
T Consensus 81 ~~L~~~~~~~-------~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~- 149 (318)
T cd05570 81 GDLMFHIQRS-------GRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILG- 149 (318)
T ss_pred CCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcC-
Confidence 9999888543 3589999999999999999999985 9999999999999999999999999998632110
Q ss_pred hhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHHHH
Q 003278 273 QYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIRR 352 (834)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~~~ 352 (834)
........||+.|+|||++... .++.++|||||||++|||+||+.||..... ..+ ...
T Consensus 150 ---------------~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslGvil~~l~~G~~pf~~~~~---~~~---~~~ 207 (318)
T cd05570 150 ---------------GVTTSTFCGTPDYIAPEILSYQ-PYGPAVDWWALGVLLYEMLAGQSPFEGDDE---DEL---FQS 207 (318)
T ss_pred ---------------CCcccceecCccccCHHHhcCC-CCCcchhhhhHHHHHHHHhhCCCCCCCCCH---HHH---HHH
Confidence 0112345799999999998654 678999999999999999999999864321 111 111
Q ss_pred HhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCch-----hhHHH
Q 003278 353 LSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSM-----KWVIE 403 (834)
Q Consensus 353 ~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm-----~~V~~ 403 (834)
... ... ... ... ...+.+++..||+.||.+||++ .++++
T Consensus 208 i~~-~~~------~~~-~~~----~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 208 ILE-DEV------RYP-RWL----SKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred HHc-CCC------CCC-CcC----CHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 111 111 010 111 2357889999999999999999 66654
No 246
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=6.4e-37 Score=362.40 Aligned_cols=279 Identities=20% Similarity=0.301 Sum_probs=204.7
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc---ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK---GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVY 187 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 187 (834)
++|+..++||+|+||.||+|++..+|+.||||++... .....+.|.+|+.++++++||||+++++++.+.+..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 4688899999999999999999889999999998643 2344567999999999999999999999999999999999
Q ss_pred EccCCCCHhHHHhcCCCc----cccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeecc
Q 003278 188 DYMPNRSLDRVLFRRPEN----LEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFG 263 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~----~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 263 (834)
||+++|+|.+++...... ......+++..++.|+.|+++||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecC
Confidence 999999999998642110 11124567888999999999999999985 99999999999999999999999999
Q ss_pred chhhhhhhhhh--hhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCC
Q 003278 264 LARWLEHELQY--QMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPD 341 (834)
Q Consensus 264 la~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~ 341 (834)
+++........ .....................||+.|||||.+... .++.++|||||||++|||+||+.||......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~-~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ 237 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGV-PASESTDIYALGVILYQMLTLSFPYRRKKGR 237 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCC-CCCcHhHHHHHHHHHHHHHHCCCCCCCcchh
Confidence 99865221100 00000000000001112345799999999988654 6799999999999999999999998642211
Q ss_pred ccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCC-chhhHHHHhhcC
Q 003278 342 DQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRP-SMKWVIEAVSGS 408 (834)
Q Consensus 342 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RP-sm~~V~~~l~~~ 408 (834)
. +. + ........+ .. . . ..-...+.+++..|++.||++|| ++.++.+.|...
T Consensus 238 k---i~-~------~~~i~~P~~--~~-p-~-~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~ 290 (932)
T PRK13184 238 K---IS-Y------RDVILSPIE--VA-P-Y-REIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPH 290 (932)
T ss_pred h---hh-h------hhhccChhh--cc-c-c-ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 1 00 0 000000000 00 0 0 01123577899999999999995 677777777654
No 247
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.2e-36 Score=327.13 Aligned_cols=264 Identities=25% Similarity=0.380 Sum_probs=198.4
Q ss_pred CCCCCCCeeeccCCeEEEEEEE----CCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeC--CEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVL----PSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHE--DQLL 184 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~----~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~--~~~~ 184 (834)
++|...+.||+|+||.||+|.. ..++..||||.+........+.|.+|+.++++++||||+++++++... ..++
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 4678889999999999999974 346889999998776666667899999999999999999999987643 4689
Q ss_pred EEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccc
Q 003278 185 LVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGL 264 (834)
Q Consensus 185 lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 264 (834)
+||||+++|+|.+++... ...++|..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+
T Consensus 84 lv~e~~~~~~L~~~l~~~------~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~ 154 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKH------RERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGL 154 (284)
T ss_pred EEEEecCCCCHHHHHHhc------CcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCcc
Confidence 999999999999998643 23589999999999999999999985 999999999999999999999999999
Q ss_pred hhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCc--
Q 003278 265 ARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDD-- 342 (834)
Q Consensus 265 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~-- 342 (834)
++.+....... .......++..|+|||++..+ .++.++|||||||++|||+||..+.......-
T Consensus 155 ~~~~~~~~~~~-------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~ 220 (284)
T cd05081 155 TKVLPQDKEYY-------------KVREPGESPIFWYAPESLTES-KFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMR 220 (284)
T ss_pred cccccCCCcce-------------eecCCCCCceEeeCHHHhccC-CcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhh
Confidence 98653221100 001112245569999988654 67899999999999999999987653221100
Q ss_pred ------c-chHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhc
Q 003278 343 ------Q-IILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSG 407 (834)
Q Consensus 343 ------~-~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~ 407 (834)
. ..+..........+.. .. ........+.+++..||+.+|++||+|.+|++.|+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~---~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~ 282 (284)
T cd05081 221 MMGNDKQGQMIVYHLIELLKNNGR-------LP---APPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEA 282 (284)
T ss_pred hcccccccccchHHHHHHHhcCCc-------CC---CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHh
Confidence 0 0000111111111110 00 000112468899999999999999999999998864
No 248
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=5.9e-36 Score=329.50 Aligned_cols=203 Identities=24% Similarity=0.337 Sum_probs=172.2
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc---ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK---GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVY 187 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 187 (834)
++|+..++||+|+||.||++..+.+++.||+|++.+. .......|.+|+.++..++|+||+++++++.+.+.+++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 4688889999999999999999888999999998642 1223345888999999999999999999999999999999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhh
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARW 267 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 267 (834)
||+++|+|.+++.+. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 81 ey~~~g~L~~~l~~~------~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~ 151 (332)
T cd05623 81 DYYVGGDLLTLLSKF------EDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLK 151 (332)
T ss_pred eccCCCcHHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchhee
Confidence 999999999999653 23588899999999999999999985 999999999999999999999999999874
Q ss_pred hhhhhhhhhhcccccccccccccceeeeccccCCCcccccc----CCCCCcccceeehhhHHHHHHhCCccCCC
Q 003278 268 LEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQK----GSVATAKSDVFSFGIVVLEVVSGRRAVDL 337 (834)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~----~~~~~~ksDV~SfGvvl~ElltG~~p~~~ 337 (834)
+..... .......||+.|+|||++.. ...++.++|||||||++|||++|+.||..
T Consensus 152 ~~~~~~---------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~ 210 (332)
T cd05623 152 LMEDGT---------------VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (332)
T ss_pred cccCCc---------------ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCC
Confidence 321100 01223569999999998852 23578899999999999999999999864
No 249
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-38 Score=333.06 Aligned_cols=262 Identities=16% Similarity=0.227 Sum_probs=193.9
Q ss_pred hCcCcCCcccccCCcEEEEEE-ECCCcEEEEEEecCCCChhHHHHHHHHHHHHHhcc-CCCceeEEEEEeeCC-eEEEEE
Q 003278 513 NNFSESQRVAEMDFGTAYQGF-LDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLR-HRNLVQLCGWCTEQG-EMLVIY 589 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~-HpNiv~l~g~~~~~~-~~~lv~ 589 (834)
+.|...+++|.|.||+||+|+ ...+..||||+++..--.-..--=.+|++.|++|+ |||||+|..++.+++ .+++||
T Consensus 10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVf 89 (538)
T KOG0661|consen 10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVF 89 (538)
T ss_pred HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeH
Confidence 345566789999999999999 56789999999875432211111257999999999 999999999999988 999999
Q ss_pred eccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccc
Q 003278 590 DYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFL 669 (834)
Q Consensus 590 Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~ 669 (834)
|||.. +|.+++.+.+ ..++.....+|+.||..||+|+|. +|+.|||+||+|||+..+..+||+||||||.+
T Consensus 90 E~Md~-NLYqLmK~R~-----r~fse~~irnim~QilqGL~hiHk---~GfFHRDlKPENiLi~~~~~iKiaDFGLARev 160 (538)
T KOG0661|consen 90 EFMDC-NLYQLMKDRN-----RLFSESDIRNIMYQILQGLAHIHK---HGFFHRDLKPENILISGNDVIKIADFGLAREV 160 (538)
T ss_pred Hhhhh-hHHHHHhhcC-----CcCCHHHHHHHHHHHHHHHHHHHh---cCcccccCChhheEecccceeEeccccccccc
Confidence 99976 6777877653 358899999999999999999996 69999999999999999999999999999976
Q ss_pred ccCCCCCcccccCccccccccCccchhcc-ccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhh--c
Q 003278 670 TRNDHGHRKATSGNRSVRGIFGYMSPEYI-ESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEAR--K 746 (834)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~-~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~--~ 746 (834)
... ...+.++.|.-|.|||++ +.+.|+.+.|+|++|||++|+.+-+.-|.... +-+.+..+.+.... +
T Consensus 161 ~Sk--------pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~s-E~Dqi~KIc~VLGtP~~ 231 (538)
T KOG0661|consen 161 RSK--------PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGAS-EIDQIYKICEVLGTPDK 231 (538)
T ss_pred ccC--------CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCc-HHHHHHHHHHHhCCCcc
Confidence 432 234457889999999976 67889999999999999999999875553222 21222222222110 0
Q ss_pred Cccc------cccccccC--CCCC-----HHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 747 RPLA------ELVDLSLN--GEYN-----HKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 747 ~~~~------~~~d~~l~--~~~~-----~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
..+. ..+...++ .... +....+.++++-+|+.-||.+|||+.+.++
T Consensus 232 ~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~ 290 (538)
T KOG0661|consen 232 DSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQ 290 (538)
T ss_pred ccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhc
Confidence 0000 00000000 0000 113345667777899999999999999986
No 250
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=4.2e-36 Score=330.50 Aligned_cols=203 Identities=25% Similarity=0.340 Sum_probs=172.6
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc---ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK---GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVY 187 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 187 (834)
++|...+.||+|+||.||+++...+++.||||.+.+. .......+.+|+.++..++|+||+++++++.+.+..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 4688899999999999999999889999999998642 1223455788999999999999999999999999999999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhh
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARW 267 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 267 (834)
||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 81 Ey~~gg~L~~~l~~~------~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~ 151 (331)
T cd05624 81 DYYVGGDLLTLLSKF------EDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLK 151 (331)
T ss_pred eCCCCCcHHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceee
Confidence 999999999999653 13578889999999999999999985 999999999999999999999999999875
Q ss_pred hhhhhhhhhhcccccccccccccceeeeccccCCCccccccC----CCCCcccceeehhhHHHHHHhCCccCCC
Q 003278 268 LEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKG----SVATAKSDVFSFGIVVLEVVSGRRAVDL 337 (834)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~----~~~~~ksDV~SfGvvl~ElltG~~p~~~ 337 (834)
+..... .......||+.|+|||++... ..++.++|||||||+||||+||+.||..
T Consensus 152 ~~~~~~---------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~ 210 (331)
T cd05624 152 MNQDGT---------------VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred ccCCCc---------------eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccC
Confidence 422110 012335699999999988541 2468899999999999999999999864
No 251
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=6.9e-37 Score=332.48 Aligned_cols=261 Identities=29% Similarity=0.436 Sum_probs=200.1
Q ss_pred cCCCCCCCeeeccCCeEEEEEEECCCCeE--EEEEEeccc-ChhhHHHHHHHHHHHHhC-CCCceeeEeeeEEeCCEEEE
Q 003278 110 SNGFDEDEVLGSGGFGKVYRAVLPSDGTV--VAVKCLAEK-GERFEKTFAAELVAVAHL-RHRNLVRLRGWCVHEDQLLL 185 (834)
Q Consensus 110 t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~--vAvK~l~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~l 185 (834)
.++|+..+.||+|+||.||+|.+..+|.. +|+|.+... .....+.|.+|+.++.++ +||||+++++++...+..++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 46788899999999999999998777754 577776543 234456788999999999 89999999999999999999
Q ss_pred EEEccCCCCHhHHHhcCCCcc---------ccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCc
Q 003278 186 VYDYMPNRSLDRVLFRRPENL---------EAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYN 256 (834)
Q Consensus 186 V~Ey~~~gsL~~~l~~~~~~~---------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~ 256 (834)
||||+++|+|.+++....... .....+++.+++.++.|++.||+|||+. +|+||||||+|||++.++.
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~~ 162 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 162 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCCc
Confidence 999999999999997543110 1124689999999999999999999985 9999999999999999999
Q ss_pred eEEeeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccC
Q 003278 257 ARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAV 335 (834)
Q Consensus 257 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~ 335 (834)
+||+|||+++...... ......++..|+|||++... .++.++|||||||++|||+| |..||
T Consensus 163 ~kl~dfg~~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~ellt~g~~p~ 224 (303)
T cd05088 163 AKIADFGLSRGQEVYV-----------------KKTMGRLPVRWMAIESLNYS-VYTTNSDVWSYGVLLWEIVSLGGTPY 224 (303)
T ss_pred EEeCccccCcccchhh-----------------hcccCCCcccccCHHHHhcc-CCcccccchhhhhHHHHHHhcCCCCc
Confidence 9999999986321100 01112346789999988544 57899999999999999998 99988
Q ss_pred CCCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcC
Q 003278 336 DLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGS 408 (834)
Q Consensus 336 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~ 408 (834)
...... +..... ..+. +.. ........+.+++..||+.+|++||++.++++.|...
T Consensus 225 ~~~~~~------~~~~~~-~~~~-------~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~ 280 (303)
T cd05088 225 CGMTCA------ELYEKL-PQGY-------RLE---KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 280 (303)
T ss_pred ccCChH------HHHHHH-hcCC-------cCC---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 532211 111111 1110 000 0001123578899999999999999999999988754
No 252
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=5.9e-37 Score=330.96 Aligned_cols=263 Identities=20% Similarity=0.333 Sum_probs=201.3
Q ss_pred CcCcCCcccccCCcEEEEEEEC------CCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEE
Q 003278 514 NFSESQRVAEMDFGTAYQGFLD------NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLV 587 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~l 587 (834)
+|.-.+.||+|+||.||+|... ++..+++|.+.... ....+.|.+|++++++++||||+++++++...+..++
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT-LAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc-HHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 4556678999999999999742 34568899876433 2334678999999999999999999999999999999
Q ss_pred EEeccCCCchhhhhhcCCCC----------CCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCC
Q 003278 588 IYDYSATRILSHLLFHNNHR----------IGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMN 657 (834)
Q Consensus 588 v~Ey~~~g~L~~~l~~~~~~----------~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~ 657 (834)
||||+++++|.+++...... .....++|..++.++.|++.||+|||+ .+|+||||||+|||+++++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS---QHFVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCc
Confidence 99999999999998754311 112348999999999999999999996 69999999999999999999
Q ss_pred ceEeeeeeccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHH
Q 003278 658 PRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLV 736 (834)
Q Consensus 658 ~ki~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~ 736 (834)
+||+|||++........ ........|+..|||||++.+..++.++|||||||++|||+| |+.|+....+.. ..
T Consensus 162 ~~l~dfg~a~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~~ 235 (291)
T cd05094 162 VKIGDFGMSRDVYSTDY-----YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE-VI 235 (291)
T ss_pred EEECCCCcccccCCCce-----eecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-HH
Confidence 99999999975432211 011123457888999999999999999999999999999999 888875433221 11
Q ss_pred HHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccCCcc
Q 003278 737 KRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGNDKR 800 (834)
Q Consensus 737 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~~~~ 800 (834)
... .. ...... . ...+ ..+.+++.+||+.+|++|||+.+|++.|+.+.+.
T Consensus 236 ~~~---~~--~~~~~~-----~-~~~~---~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 236 ECI---TQ--GRVLER-----P-RVCP---KEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred HHH---hC--CCCCCC-----C-ccCC---HHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 111 11 111110 0 1112 2455677799999999999999999999877553
No 253
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=6.7e-37 Score=324.15 Aligned_cols=250 Identities=24% Similarity=0.388 Sum_probs=194.1
Q ss_pred eeeccCCeEEEEEEE--CCCCeEEEEEEecccC--hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEccCCC
Q 003278 118 VLGSGGFGKVYRAVL--PSDGTVVAVKCLAEKG--ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNR 193 (834)
Q Consensus 118 ~LG~G~fG~Vy~~~~--~~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 193 (834)
.||+|+||.||+|.+ ..++..||+|+++... ....+.|.+|+.+++.++||||++++|++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 589999999999975 3567899999986432 345678999999999999999999999885 45679999999999
Q ss_pred CHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhhh
Q 003278 194 SLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQ 273 (834)
Q Consensus 194 sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~ 273 (834)
+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+.....
T Consensus 81 ~L~~~l~~~-------~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~ 150 (257)
T cd05116 81 PLNKFLQKN-------KHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADEN 150 (257)
T ss_pred cHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCC
Confidence 999998542 3588999999999999999999985 999999999999999999999999999976532210
Q ss_pred hhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCccchHHHHHHH
Q 003278 274 YQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQIILLDWIRR 352 (834)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~~l~~~~~~ 352 (834)
. ....+...+++.|+|||.+..+ .++.++|||||||++|||+| |+.||..... ..+...
T Consensus 151 ~-------------~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---~~~~~~--- 210 (257)
T cd05116 151 Y-------------YKAKTHGKWPVKWYAPECMNYY-KFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG---NEVTQM--- 210 (257)
T ss_pred e-------------eeecCCCCCCccccCHhHhccC-CcCchhHHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHH---
Confidence 0 0001222356889999988654 57889999999999999998 9999864321 112121
Q ss_pred HhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcCC
Q 003278 353 LSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGSY 409 (834)
Q Consensus 353 ~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~~ 409 (834)
...+..... . ... ...+.+++..||+.||++||+|.+|++.|...|
T Consensus 211 -i~~~~~~~~-----~-~~~----~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~~ 256 (257)
T cd05116 211 -IESGERMEC-----P-QRC----PPEMYDLMKLCWTYGVDERPGFAVVELRLRNYY 256 (257)
T ss_pred -HHCCCCCCC-----C-CCC----CHHHHHHHHHHhccCchhCcCHHHHHHHHhccc
Confidence 122221111 1 111 245789999999999999999999999998754
No 254
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=5.4e-37 Score=325.34 Aligned_cols=257 Identities=23% Similarity=0.375 Sum_probs=203.3
Q ss_pred HhhCcCcCCcccccCCcEEEEEEECCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEe
Q 003278 511 ATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYD 590 (834)
Q Consensus 511 at~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~E 590 (834)
+..+|...+.||+|+||.||+|...++..+++|.+..... .....+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 82 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDL-LKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE 82 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccch-hhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence 3456777788999999999999988889999999865432 234578999999999999999999999999999999999
Q ss_pred ccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccc
Q 003278 591 YSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLT 670 (834)
Q Consensus 591 y~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~ 670 (834)
|+++++|.+++..... ..++|..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++....
T Consensus 83 ~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~i~~al~~lH~---~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~ 155 (261)
T cd05148 83 LMEKGSLLAFLRSPEG----QVLPVASLIDMACQVAEGMAYLEE---QNSIHRDLAARNILVGEDLVCKVADFGLARLIK 155 (261)
T ss_pred ecccCCHHHHHhcCCC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccCcceEEEcCCceEEEccccchhhcC
Confidence 9999999999875321 247899999999999999999996 689999999999999999999999999997653
Q ss_pred cCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcCcc
Q 003278 671 RNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRPL 749 (834)
Q Consensus 671 ~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 749 (834)
.... ......++..|+|||++.++.++.++||||||+++|||+| |+.|+...... ....... ...+.
T Consensus 156 ~~~~-------~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~-~~~~~~~---~~~~~- 223 (261)
T cd05148 156 EDVY-------LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH-EVYDQIT---AGYRM- 223 (261)
T ss_pred Cccc-------cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH-HHHHHHH---hCCcC-
Confidence 2211 0112346778999999988899999999999999999999 78888643322 2222111 11010
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccC
Q 003278 750 AELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGN 797 (834)
Q Consensus 750 ~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~ 797 (834)
...... + ..+.+++.+||..||++|||+.++.+.|+.+
T Consensus 224 ------~~~~~~-~---~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 224 ------PCPAKC-P---QEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred ------CCCCCC-C---HHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 011111 1 2455677799999999999999999999763
No 255
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=9.4e-37 Score=330.42 Aligned_cols=261 Identities=20% Similarity=0.294 Sum_probs=198.2
Q ss_pred hCcCcCCcccccCCcEEEEEEECC-Cc--EEEEEEecCCCChhHHHHHHHHHHHHHhc-cCCCceeEEEEEeeCCeEEEE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLDN-HQ--YVLVKRLGMSKCPALRTRFSNELQNLARL-RHRNLVQLCGWCTEQGEMLVI 588 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~~-~~--~vavK~~~~~~~~~~~~~f~~E~~~l~~l-~HpNiv~l~g~~~~~~~~~lv 588 (834)
++|...+.||+|+||.||+|...+ +. .+++|.++........+.|.+|+++++++ +||||+++++++.+.+..++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 456777889999999999998754 32 47888877544444556799999999999 799999999999999999999
Q ss_pred EeccCCCchhhhhhcCCCCC----------CCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCc
Q 003278 589 YDYSATRILSHLLFHNNHRI----------GHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNP 658 (834)
Q Consensus 589 ~Ey~~~g~L~~~l~~~~~~~----------~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ 658 (834)
|||+++|+|.+++....... ....+++.....|+.|++.||+|||+ .+|+||||||+|||+++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE---KQFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCcCCcceEEECCCCeE
Confidence 99999999999986532110 11248889999999999999999996 699999999999999999999
Q ss_pred eEeeeeeccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHH
Q 003278 659 RLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVK 737 (834)
Q Consensus 659 ki~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~ 737 (834)
||+|||++...... .......++..|+|||++.+..++.++|||||||++|||+| |..||....+.... .
T Consensus 159 kl~dfg~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~-~ 229 (297)
T cd05089 159 KIADFGLSRGEEVY--------VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELY-E 229 (297)
T ss_pred EECCcCCCccccce--------eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHH-H
Confidence 99999998642110 00111233567999999998899999999999999999998 98998654332211 1
Q ss_pred HHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccCCc
Q 003278 738 RVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGNDK 799 (834)
Q Consensus 738 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~~~ 799 (834)
.. ... . ........+ . .+.+++.+||+.+|.+|||+.+|++.|+....
T Consensus 230 ~~---~~~---~----~~~~~~~~~-~---~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~ 277 (297)
T cd05089 230 KL---PQG---Y----RMEKPRNCD-D---EVYELMRQCWRDRPYERPPFAQISVQLSRMLE 277 (297)
T ss_pred HH---hcC---C----CCCCCCCCC-H---HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 11 000 0 001111111 2 35566779999999999999999998875544
No 256
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=9.7e-37 Score=328.62 Aligned_cols=261 Identities=24% Similarity=0.342 Sum_probs=201.5
Q ss_pred hhCcCcCCcccccCCcEEEEEEEC------CCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeE
Q 003278 512 TNNFSESQRVAEMDFGTAYQGFLD------NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEM 585 (834)
Q Consensus 512 t~~f~~~~~ig~g~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~ 585 (834)
.++|...+.||+|+||.||++... ++..||+|.+...........|.+|+.++++++||||++++++|.+.+..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 357888899999999999999863 35789999987665555567899999999999999999999999999999
Q ss_pred EEEEeccCCCchhhhhhcCCCC----------------CCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCc
Q 003278 586 LVIYDYSATRILSHLLFHNNHR----------------IGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSA 649 (834)
Q Consensus 586 ~lv~Ey~~~g~L~~~l~~~~~~----------------~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~N 649 (834)
++||||+++|+|.+++...... .....+++..++.++.|++.||+|||+ .+++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~---~~i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE---RKFVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCeecccccHhh
Confidence 9999999999999998743211 112347889999999999999999996 699999999999
Q ss_pred eeecCCCCceEeeeeeccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCC
Q 003278 650 ITLDPDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDF 728 (834)
Q Consensus 650 ILld~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~ 728 (834)
||+++++.+|++|||++..+...... .......++..|+|||++.++.++.++|||||||++|||+| |..|+..
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~ 235 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYY-----KASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYG 235 (288)
T ss_pred eEecCCCceEECccccceecccCccc-----cccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999998754322110 00112234677999999998999999999999999999998 7777753
Q ss_pred CCCchhHHHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHc
Q 003278 729 RLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795 (834)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~ 795 (834)
..+.. ..... . . ..... .... .+ .++.+++.+||+.+|++|||+.||++.|+
T Consensus 236 ~~~~~-~~~~~---~-~-~~~~~-----~~~~-~~---~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 236 MAHEE-VIYYV---R-D-GNVLS-----CPDN-CP---LELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred CCHHH-HHHHH---h-c-CCCCC-----CCCC-CC---HHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 32221 11111 1 0 11100 0111 11 34566777999999999999999999986
No 257
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=6e-37 Score=328.31 Aligned_cols=269 Identities=21% Similarity=0.352 Sum_probs=210.5
Q ss_pred cCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEeccC
Q 003278 515 FSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSA 593 (834)
Q Consensus 515 f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~ 593 (834)
|+..+.||+|+||.||+|.. .++..||+|.+.........+.|.+|+.++++++||||+++++++......++||||++
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG 85 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence 44456799999999999986 45778999998755545556789999999999999999999999999999999999999
Q ss_pred CCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCC
Q 003278 594 TRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRND 673 (834)
Q Consensus 594 ~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~ 673 (834)
+++|.+++.. ..+++.....++.|++.||+|||+ .+|+|+||+|+||++++++.+|++|||++..+....
T Consensus 86 ~~~L~~~~~~-------~~~~~~~~~~~~~~i~~~l~~lH~---~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06642 86 GGSALDLLKP-------GPLEETYIATILREILKGLDYLHS---ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ 155 (277)
T ss_pred CCcHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHhc---CCeeccCCChheEEEeCCCCEEEccccccccccCcc
Confidence 9999988753 137888889999999999999996 699999999999999999999999999997654221
Q ss_pred CCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCcccccc
Q 003278 674 HGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELV 753 (834)
Q Consensus 674 ~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (834)
.......|+..|+|||++.+..++.++|||||||++|||+||+.|+....+.... ... ... .
T Consensus 156 -------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~-~~~-----~~~-----~ 217 (277)
T cd06642 156 -------IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVL-FLI-----PKN-----S 217 (277)
T ss_pred -------hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHH-hhh-----hcC-----C
Confidence 1112346889999999999889999999999999999999999997643322111 100 000 0
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccCCccccccCccccchHHHhhhchhchHHHHHHHH
Q 003278 754 DLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGNDKRFMEDGQMTENLEEWKQRNECSLSLIKRIQA 830 (834)
Q Consensus 754 d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 830 (834)
.+.+.+.. ...+..++.+||+.+|++||||.+|++.- -+..|..+-++=+++++|++.
T Consensus 218 ~~~~~~~~----~~~~~~li~~~l~~~p~~Rp~~~~il~~~---------------~~~~~~~~~~~~~~~~~~~~~ 275 (277)
T cd06642 218 PPTLEGQY----SKPFKEFVEACLNKDPRFRPTAKELLKHK---------------FITRYTKKTSFLTELIDRYKR 275 (277)
T ss_pred CCCCCccc----CHHHHHHHHHHccCCcccCcCHHHHHHhH---------------HHHHHhhhHHHHHHHHHHhhc
Confidence 11111111 22455666799999999999999999752 245566667777888888764
No 258
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=6.6e-37 Score=329.35 Aligned_cols=266 Identities=23% Similarity=0.325 Sum_probs=204.6
Q ss_pred ccHHHHHhhcCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhC-CCCceeeEeeeEE-
Q 003278 101 FSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHL-RHRNLVRLRGWCV- 178 (834)
Q Consensus 101 f~~~el~~~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~- 178 (834)
+.++.+..++++|+..+.||+|+||.||+|....+++.+|+|.+.... .....+.+|+.++.++ +||||++++++|.
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 455667778899999999999999999999998899999999876432 2345688899999999 6999999999985
Q ss_pred ----eCCEEEEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCC
Q 003278 179 ----HEDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQ 254 (834)
Q Consensus 179 ----~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~ 254 (834)
..+.+++||||+++|+|.+++..... ....+++..+..++.|+++||.|||+. +|+||||||+||+++.+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~ 160 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLK---RGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTE 160 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhhc---cCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCC
Confidence 34568999999999999998864321 234688999999999999999999985 99999999999999999
Q ss_pred CceEEeeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCcccccc----CCCCCcccceeehhhHHHHHHh
Q 003278 255 YNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQK----GSVATAKSDVFSFGIVVLEVVS 330 (834)
Q Consensus 255 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~----~~~~~~ksDV~SfGvvl~Ellt 330 (834)
+.+||+|||+++.+.... .......||+.|+|||++.. +..++.++|||||||++|||+|
T Consensus 161 ~~~kl~dfg~~~~~~~~~----------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~ 224 (286)
T cd06638 161 GGVKLVDFGVSAQLTSTR----------------LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGD 224 (286)
T ss_pred CCEEEccCCceeecccCC----------------CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhc
Confidence 999999999987542210 01123458999999998753 2346889999999999999999
Q ss_pred CCccCCCCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 331 GRRAVDLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 331 G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
|+.|+....... .+.. . .........++ ..+ ...+..++..||+.+|++||++.++++.
T Consensus 225 g~~p~~~~~~~~--~~~~----~-~~~~~~~~~~~----~~~----~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 225 GDPPLADLHPMR--ALFK----I-PRNPPPTLHQP----ELW----SNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred CCCCCCCCchhH--HHhh----c-cccCCCcccCC----CCc----CHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 999986432111 0100 0 00100011111 011 1357889999999999999999999875
No 259
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=3.8e-36 Score=320.63 Aligned_cols=255 Identities=17% Similarity=0.267 Sum_probs=187.0
Q ss_pred cccccCCcEEEEEEECCC---cEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEeccCCCc
Q 003278 520 RVAEMDFGTAYQGFLDNH---QYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRI 596 (834)
Q Consensus 520 ~ig~g~~g~vy~~~~~~~---~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~~g~ 596 (834)
.||+|+||.||+|...++ ..+++|.+.........+.|.+|+.+++.++|||||+++|+|.+....++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 589999999999975433 34667777655444456789999999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCCCC
Q 003278 597 LSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGH 676 (834)
Q Consensus 597 L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~~~ 676 (834)
|.+++...... ...+++.....++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||++........
T Consensus 82 L~~~l~~~~~~--~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~-- 154 (268)
T cd05086 82 LKSYLSQEQWH--RRNSQLLLLQRMACEIAAGVTHMHK---HNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY-- 154 (268)
T ss_pred HHHHHHhhhcc--cccccHHHHHHHHHHHHHHHHHHHH---CCeeccCCccceEEEcCCccEEecccccccccCcchh--
Confidence 99998754221 1235666677899999999999996 6899999999999999999999999999864221110
Q ss_pred cccccCccccccccCccchhcccc-------CCCCccCcchhhHHHHHHHHhC-CCccCCCCCchhHHHHHHHHHhhcCc
Q 003278 677 RKATSGNRSVRGIFGYMSPEYIES-------GEATSMADVYSFGVVVLEVVTG-QMAVDFRLPEGLLVKRVHEFEARKRP 748 (834)
Q Consensus 677 ~~~~~~~~~~~Gt~~Y~aPE~~~~-------~~~~~k~DV~SfGvvl~E~~tG-~~p~~~~~~~~~~~~~~~~~~~~~~~ 748 (834)
........|+..|+|||++.. ..++.++|||||||++|||+|+ ..|+....+........ . ..
T Consensus 155 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~----~--~~ 225 (268)
T cd05086 155 ---IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVI----K--DQ 225 (268)
T ss_pred ---hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH----h--hc
Confidence 011224568899999998743 2457899999999999999985 55664332222111111 1 11
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHc
Q 003278 749 LAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795 (834)
Q Consensus 749 ~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~ 795 (834)
...+.++.+...+.. . +.+++..|| .+|++||||.+|++.|.
T Consensus 226 ~~~~~~~~~~~~~~~-~---~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 226 QVKLFKPQLELPYSE-R---WYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred ccccCCCccCCCCcH-H---HHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 123334444333332 2 334555799 67999999999999873
No 260
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=9.9e-37 Score=322.68 Aligned_cols=250 Identities=23% Similarity=0.353 Sum_probs=194.7
Q ss_pred CcCcCCcccccCCcEEEEEEECCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEeccC
Q 003278 514 NFSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSA 593 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~ 593 (834)
+|...+.||+|+||.||+|...++..+|+|.+..... ....|.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM--SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA 82 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC--CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence 3556678999999999999987777899998764322 23568899999999999999999999999999999999999
Q ss_pred CCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCC
Q 003278 594 TRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRND 673 (834)
Q Consensus 594 ~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~ 673 (834)
+++|.+++..... .++|...+.++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++......
T Consensus 83 ~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~ 154 (256)
T cd05059 83 NGCLLNYLRERKG-----KLGTEWLLDMCSDVCEAMEYLES---NGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQ 154 (256)
T ss_pred CCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHhhEEECCCCcEEECCcccceeccccc
Confidence 9999999865321 47899999999999999999997 689999999999999999999999999997643211
Q ss_pred CCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcCccccc
Q 003278 674 HGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRPLAEL 752 (834)
Q Consensus 674 ~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (834)
. .......++..|+|||++.+..++.++|||||||++|||+| |+.|+....+ ........ ...
T Consensus 155 ~------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-~~~~~~~~---~~~------ 218 (256)
T cd05059 155 Y------TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSN-SEVVESVS---AGY------ 218 (256)
T ss_pred c------cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCH-HHHHHHHH---cCC------
Confidence 0 00111234567999999998999999999999999999999 7888764322 22111111 000
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHH
Q 003278 753 VDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSIL 794 (834)
Q Consensus 753 ~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L 794 (834)
....... .+ ..+.+++.+||..+|++||||.+|++.|
T Consensus 219 -~~~~~~~-~~---~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 219 -RLYRPKL-AP---TEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred -cCCCCCC-CC---HHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 0111111 12 2456677799999999999999999887
No 261
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=8.4e-37 Score=326.89 Aligned_cols=239 Identities=22% Similarity=0.312 Sum_probs=183.5
Q ss_pred cccccCCcEEEEEEECC-------------------------CcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCcee
Q 003278 520 RVAEMDFGTAYQGFLDN-------------------------HQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQ 574 (834)
Q Consensus 520 ~ig~g~~g~vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~ 574 (834)
.||+|+||.||+|.+.. ...|++|.+.... ......|.+|+.++++++|||||+
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~ 80 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH-RDIALAFFETASLMSQVSHIHLAF 80 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH-HHHHHHHHHHHHHHhcCCCCCeee
Confidence 58999999999998521 1358889886433 233467889999999999999999
Q ss_pred EEEEEeeCCeEEEEEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecC
Q 003278 575 LCGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDP 654 (834)
Q Consensus 575 l~g~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~ 654 (834)
++|+|.+....++||||+++|+|..++.... ..+++..+++++.|+++||+|||+ .+|+||||||+|||+++
T Consensus 81 ~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~Nill~~ 152 (274)
T cd05076 81 VHGVCVRGSENIMVEEFVEHGPLDVCLRKEK-----GRVPVAWKITVAQQLASALSYLED---KNLVHGNVCAKNILLAR 152 (274)
T ss_pred EEEEEEeCCceEEEEecCCCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHc---CCccCCCCCcccEEEec
Confidence 9999999999999999999999998886432 237888899999999999999996 69999999999999986
Q ss_pred CC-------CceEeeeeeccccccCCCCCcccccCccccccccCccchhcccc-CCCCccCcchhhHHHHHHHH-hCCCc
Q 003278 655 DM-------NPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIES-GEATSMADVYSFGVVVLEVV-TGQMA 725 (834)
Q Consensus 655 ~~-------~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~~~k~DV~SfGvvl~E~~-tG~~p 725 (834)
++ .+|++|||++...... ....|+..|+|||++.+ ..++.++|||||||++|||+ +|+.|
T Consensus 153 ~~~~~~~~~~~kl~d~g~~~~~~~~-----------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p 221 (274)
T cd05076 153 LGLAEGTSPFIKLSDPGVSFTALSR-----------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVP 221 (274)
T ss_pred cCcccCccceeeecCCccccccccc-----------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 54 3799999998543211 12357788999998865 56899999999999999995 78888
Q ss_pred cCCCCCchhHHHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHc
Q 003278 726 VDFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795 (834)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~ 795 (834)
+....+... .. ....... .....+ ..+..++.+||+.+|++||||.+|++.|+
T Consensus 222 ~~~~~~~~~-~~----~~~~~~~--------~~~~~~----~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 222 LKERTPSEK-ER----FYEKKHR--------LPEPSC----KELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred ccccChHHH-HH----HHHhccC--------CCCCCC----hHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 865433221 11 1111111 111111 24566777999999999999999999874
No 262
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=5.6e-37 Score=334.16 Aligned_cols=267 Identities=20% Similarity=0.263 Sum_probs=197.3
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC-hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEc
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDY 189 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 189 (834)
++|...+.||+|+||.||+|+...++..||+|.+.... ......+.+|+.++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 46888899999999999999998899999999986432 23345678899999999999999999999999999999999
Q ss_pred cCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhh
Q 003278 190 MPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLE 269 (834)
Q Consensus 190 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~ 269 (834)
+++ +|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 86 ~~~-~l~~~~~~~------~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 155 (309)
T cd07872 86 LDK-DLKQYMDDC------GNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKS 155 (309)
T ss_pred CCC-CHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecC
Confidence 985 888777543 23578899999999999999999985 99999999999999999999999999987432
Q ss_pred hhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHH-
Q 003278 270 HELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLD- 348 (834)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~- 348 (834)
... .......||+.|+|||.+.....++.++|||||||++|||+||+.||......+......
T Consensus 156 ~~~----------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 219 (309)
T cd07872 156 VPT----------------KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFR 219 (309)
T ss_pred CCc----------------cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence 110 001233579999999988665567899999999999999999999986543222111110
Q ss_pred --------HHHHHhhcCccccccccccCC----CCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 349 --------WIRRLSDEGKVLQAGDNRLSD----GSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 349 --------~~~~~~~~~~~~~~~d~~l~~----~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
+...............+.... ..... -...+.++...|++.||.+||++.|+++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 220 LLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPR-LDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred HhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccC-CCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 000000000000000000000 00000 01346789999999999999999999863
No 263
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.9e-36 Score=327.88 Aligned_cols=251 Identities=23% Similarity=0.350 Sum_probs=200.1
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEcc
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYM 190 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 190 (834)
.+|+..+.||+|+||.||+|+...++..||+|.+........+.+.+|+.+++.++||||++++++|...+..++||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 45788889999999999999998899999999987655555677899999999999999999999999999999999999
Q ss_pred CCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhh
Q 003278 191 PNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEH 270 (834)
Q Consensus 191 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~ 270 (834)
++++|.+++.. ..+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 100 ~~~~L~~~~~~--------~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~ 168 (296)
T cd06654 100 AGGSLTDVVTE--------TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 168 (296)
T ss_pred CCCCHHHHHHh--------cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhccc
Confidence 99999998853 2478899999999999999999985 999999999999999999999999999875322
Q ss_pred hhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHH
Q 003278 271 ELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWI 350 (834)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~ 350 (834)
.. .......|++.|+|||.+... ..+.++|||||||++|||+||+.||....+... +..
T Consensus 169 ~~----------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~--~~~-- 227 (296)
T cd06654 169 EQ----------------SKRSTMVGTPYWMAPEVVTRK-AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA--LYL-- 227 (296)
T ss_pred cc----------------cccCcccCCccccCHHHHcCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCHHHh--HHH--
Confidence 10 001234589999999988654 568999999999999999999999865432111 111
Q ss_pred HHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 351 RRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 351 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
....+. +.+. ....-...+.+++..||..+|++||++.++++.
T Consensus 228 --~~~~~~------~~~~---~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 228 --IATNGT------PELQ---NPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred --HhcCCC------CCCC---CccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 111110 0110 000112357789999999999999999999873
No 264
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.4e-36 Score=334.02 Aligned_cols=242 Identities=14% Similarity=0.190 Sum_probs=185.1
Q ss_pred CcccccCCcEEEEEEEC-CCcEEEEEEecCCC--ChhHHHHHHHHHHHHHhc-cCCCceeEEEEEeeCCeEEEEEeccCC
Q 003278 519 QRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSK--CPALRTRFSNELQNLARL-RHRNLVQLCGWCTEQGEMLVIYDYSAT 594 (834)
Q Consensus 519 ~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~f~~E~~~l~~l-~HpNiv~l~g~~~~~~~~~lv~Ey~~~ 594 (834)
+.||+|+||.||++... +++.||+|.+.... .....+.+.+|+.++.++ +|||||++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 35899999999999964 57889999987532 223345678899998877 899999999999999999999999999
Q ss_pred CchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCC
Q 003278 595 RILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674 (834)
Q Consensus 595 g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~ 674 (834)
|+|..++.... .+++.....++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~~------~l~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~- 150 (329)
T cd05618 81 GDLMFHMQRQR------KLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG- 150 (329)
T ss_pred CCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCC-
Confidence 99988875432 37888889999999999999996 699999999999999999999999999987532211
Q ss_pred CCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCC----chhHHHHHHHHHhhcCccc
Q 003278 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLP----EGLLVKRVHEFEARKRPLA 750 (834)
Q Consensus 675 ~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~----~~~~~~~~~~~~~~~~~~~ 750 (834)
.......||+.|+|||++.+..++.++|||||||++|||+||+.||..... ................
T Consensus 151 ------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~--- 221 (329)
T cd05618 151 ------DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ--- 221 (329)
T ss_pred ------CccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCC---
Confidence 112346799999999999999999999999999999999999999853211 1111111111111100
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCh
Q 003278 751 ELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSM 787 (834)
Q Consensus 751 ~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm 787 (834)
..++...+ . .+..++.+||..||++|||.
T Consensus 222 ----~~~p~~~~-~---~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 222 ----IRIPRSLS-V---KAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred ----CCCCCCCC-H---HHHHHHHHHhcCCHHHcCCC
Confidence 01111222 2 34456668999999999984
No 265
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=6e-37 Score=328.97 Aligned_cols=261 Identities=28% Similarity=0.414 Sum_probs=202.1
Q ss_pred CCCCCCCeeeccCCeEEEEEEEC-----CCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLP-----SDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLL 185 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~-----~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 185 (834)
++|...++||+|+||.||++... .++..+|+|.+........+.|.+|+.+++.++|+||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 46777899999999999999742 3567899999887766677889999999999999999999999999999999
Q ss_pred EEEccCCCCHhHHHhcCCCc--------cccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCce
Q 003278 186 VYDYMPNRSLDRVLFRRPEN--------LEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNA 257 (834)
Q Consensus 186 V~Ey~~~gsL~~~l~~~~~~--------~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~ 257 (834)
||||+++|+|.+++...... ......++|..++.++.|++.||+|||+. +|+||||||+|||+++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCCCCE
Confidence 99999999999998754321 11124589999999999999999999985 99999999999999999999
Q ss_pred EEeeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCC
Q 003278 258 RLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVD 336 (834)
Q Consensus 258 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~ 336 (834)
||+|||+++.......+ .......+++.|+|||.+... .++.++|||||||++|||+| |+.||.
T Consensus 162 kL~dfg~~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~el~~~g~~p~~ 226 (280)
T cd05092 162 KIGDFGMSRDIYSTDYY--------------RVGGRTMLPIRWMPPESILYR-KFTTESDIWSFGVVLWEIFTYGKQPWY 226 (280)
T ss_pred EECCCCceeEcCCCcee--------------ecCCCccccccccCHHHhccC-CcCchhhHHHHHHHHHHHHcCCCCCCc
Confidence 99999998754221000 001223357889999988654 57999999999999999999 888875
Q ss_pred CCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhh
Q 003278 337 LTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVS 406 (834)
Q Consensus 337 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~ 406 (834)
..... .. .... ..+..... + ... ...+.+++..||+.||.+||++.+|.+.|+
T Consensus 227 ~~~~~---~~---~~~~-~~~~~~~~--~----~~~----~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 227 QLSNT---EA---IECI-TQGRELER--P----RTC----PPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred cCCHH---HH---HHHH-HcCccCCC--C----CCC----CHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 32211 11 1111 11111100 0 111 235789999999999999999999999875
No 266
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=6.3e-37 Score=353.41 Aligned_cols=258 Identities=20% Similarity=0.232 Sum_probs=198.6
Q ss_pred HHhhCcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCC-ChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCC----
Q 003278 510 SATNNFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSK-CPALRTRFSNELQNLARLRHRNLVQLCGWCTEQG---- 583 (834)
Q Consensus 510 ~at~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~---- 583 (834)
...++|...+.||+|+||+||+|.. .+++.||||.+.... .......+.+|+.++..++|+|||+++..+...+
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 3456788888999999999999984 568999999987543 3444567899999999999999999987664322
Q ss_pred ----eEEEEEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCce
Q 003278 584 ----EMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPR 659 (834)
Q Consensus 584 ----~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~k 659 (834)
.+++||||+++|+|.+++...... ...+++.....++.|++.||.|||+ .+|+||||||+||||+.++.+|
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~--~~~l~e~~~~~i~~qll~aL~~lH~---~~IiHrDLKP~NILl~~~~~vk 183 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKT--NRTFREHEAGLLFIQVLLAVHHVHS---KHMIHRDIKSANILLCSNGLVK 183 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEeCCCCEE
Confidence 368999999999999998754321 2357888889999999999999996 6999999999999999999999
Q ss_pred EeeeeeccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHH
Q 003278 660 LGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRV 739 (834)
Q Consensus 660 i~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~ 739 (834)
|+|||+++....... ........||+.|||||++.+..++.++|||||||+||||+||+.||........ ....
T Consensus 184 L~DFGls~~~~~~~~-----~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~-~~~~ 257 (496)
T PTZ00283 184 LGDFGFSKMYAATVS-----DDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEV-MHKT 257 (496)
T ss_pred EEecccCeecccccc-----ccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHH
Confidence 999999986533211 1112356899999999999999999999999999999999999999864332211 1111
Q ss_pred HHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 740 HEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 740 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
... .. ++ +.... .. .+..++.+||+.||++|||+.++++
T Consensus 258 ---~~~--~~----~~-~~~~~-~~---~l~~li~~~L~~dP~~RPs~~ell~ 296 (496)
T PTZ00283 258 ---LAG--RY----DP-LPPSI-SP---EMQEIVTALLSSDPKRRPSSSKLLN 296 (496)
T ss_pred ---hcC--CC----CC-CCCCC-CH---HHHHHHHHHcccChhhCcCHHHHHh
Confidence 100 00 00 11112 22 3445666899999999999999875
No 267
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-37 Score=306.23 Aligned_cols=200 Identities=21% Similarity=0.295 Sum_probs=175.3
Q ss_pred hCcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCCChh--HHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPA--LRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIY 589 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~--~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~ 589 (834)
++|....-+|.|+||.|...+. .+|...|+|.++...--. ..+-..+|-.+|+.+.||.+|+|++.|.+.+.+++||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 4577778899999999999885 457889999987543222 2244678999999999999999999999999999999
Q ss_pred eccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccc
Q 003278 590 DYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFL 669 (834)
Q Consensus 590 Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~ 669 (834)
||.++|-|..+|+..++ ++.....-+|.||+.||+|||+ ..||+|||||+|||||++|.+||.|||+|+.+
T Consensus 124 eyv~GGElFS~Lrk~~r------F~e~~arFYAAeivlAleylH~---~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v 194 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKSGR------FSEPHARFYAAEIVLALEYLHS---LDIIYRDLKPENLLLDQNGHIKITDFGFAKRV 194 (355)
T ss_pred eccCCccHHHHHHhcCC------CCchhHHHHHHHHHHHHHHHHh---cCeeeccCChHHeeeccCCcEEEEeccceEEe
Confidence 99999999999986543 6777777899999999999997 69999999999999999999999999999875
Q ss_pred ccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCC
Q 003278 670 TRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLP 731 (834)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~ 731 (834)
.. .+-+.|||+.|+|||.+.+..|..++|.|||||++|||+.|..||....+
T Consensus 195 ~~----------rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~ 246 (355)
T KOG0616|consen 195 SG----------RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP 246 (355)
T ss_pred cC----------cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh
Confidence 42 24468999999999999999999999999999999999999999986555
No 268
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=5.7e-37 Score=338.18 Aligned_cols=200 Identities=20% Similarity=0.276 Sum_probs=163.1
Q ss_pred cCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCC-ChhHHHHHHHHHHHHHhccCCCceeEEEEEeeC-----CeEEE
Q 003278 515 FSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSK-CPALRTRFSNELQNLARLRHRNLVQLCGWCTEQ-----GEMLV 587 (834)
Q Consensus 515 f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~-----~~~~l 587 (834)
|...+.||+|+||.||+|.. .++..||||++.... ......++.+|+.++++++|||||++++++... ...++
T Consensus 2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~l 81 (338)
T cd07859 2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYV 81 (338)
T ss_pred eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEE
Confidence 45567899999999999995 468899999986432 222335688999999999999999999988543 24799
Q ss_pred EEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecc
Q 003278 588 IYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAE 667 (834)
Q Consensus 588 v~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~ 667 (834)
||||+. ++|.+++.... .+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 82 v~e~~~-~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~ 151 (338)
T cd07859 82 VFELME-SDLHQVIKAND------DLTPEHHQFFLYQLLRALKYIHT---ANVFHRDLKPKNILANADCKLKICDFGLAR 151 (338)
T ss_pred EEecCC-CCHHHHHHhcc------cCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEccCcccc
Confidence 999996 67888775432 37889999999999999999997 689999999999999999999999999997
Q ss_pred ccccCCCCCcccccCccccccccCccchhcccc--CCCCccCcchhhHHHHHHHHhCCCccCC
Q 003278 668 FLTRNDHGHRKATSGNRSVRGIFGYMSPEYIES--GEATSMADVYSFGVVVLEVVTGQMAVDF 728 (834)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~--~~~~~k~DV~SfGvvl~E~~tG~~p~~~ 728 (834)
........ ........||+.|+|||++.+ ..++.++|||||||++|||+||+.||..
T Consensus 152 ~~~~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~ 210 (338)
T cd07859 152 VAFNDTPT----AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPG 210 (338)
T ss_pred ccccccCc----cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCC
Confidence 64322110 111234579999999999875 6789999999999999999999999854
No 269
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.8e-36 Score=323.35 Aligned_cols=259 Identities=26% Similarity=0.395 Sum_probs=195.6
Q ss_pred CCCCCeeeccCCeEEEEEEECCCCe--EEEEEEeccc--ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeC------CE
Q 003278 113 FDEDEVLGSGGFGKVYRAVLPSDGT--VVAVKCLAEK--GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHE------DQ 182 (834)
Q Consensus 113 f~~~~~LG~G~fG~Vy~~~~~~~g~--~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~------~~ 182 (834)
|...+.||+|+||.||+|.+..++. .||||.++.. .....+.|.+|+.+++.++||||++++++|... ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3456899999999999999876665 6999987643 234456789999999999999999999988643 24
Q ss_pred EEEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeec
Q 003278 183 LLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDF 262 (834)
Q Consensus 183 ~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 262 (834)
.++||||+++|+|.+++...... .....++|.....++.|++.||+|||+. +|+||||||+|||+++++.+||+||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Df 156 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLG-DCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADF 156 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhccc-CCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCC
Confidence 78999999999999887432111 1234589999999999999999999985 9999999999999999999999999
Q ss_pred cchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCC
Q 003278 263 GLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPD 341 (834)
Q Consensus 263 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~ 341 (834)
|+++.+...... .......+++.|+|||++... .++.++|||||||++|||++ |+.|+....
T Consensus 157 g~~~~~~~~~~~--------------~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~el~~~g~~p~~~~~-- 219 (272)
T cd05075 157 GLSKKIYNGDYY--------------RQGRIAKMPVKWIAIESLADR-VYTTKSDVWSFGVTMWEIATRGQTPYPGVE-- 219 (272)
T ss_pred CcccccCcccce--------------ecCCcccCCcccCCHHHccCC-CcChHHHHHHHHHHHHHHHcCCCCCCCCCC--
Confidence 999864321100 001223467789999988654 67899999999999999999 788875421
Q ss_pred ccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhc
Q 003278 342 DQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSG 407 (834)
Q Consensus 342 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~ 407 (834)
...+.. ....+..... . . .....+.+++..||+.+|++||++.++++.|..
T Consensus 220 -~~~~~~----~~~~~~~~~~-----~-~----~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~ 270 (272)
T cd05075 220 -NSEIYD----YLRQGNRLKQ-----P-P----DCLDGLYSLMSSCWLLNPKDRPSFETLRCELEK 270 (272)
T ss_pred -HHHHHH----HHHcCCCCCC-----C-C----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 111111 1112211110 0 1 112457899999999999999999999998865
No 270
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.3e-36 Score=326.99 Aligned_cols=257 Identities=28% Similarity=0.425 Sum_probs=204.7
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc-ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEc
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDY 189 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 189 (834)
++|+..+.||+|+||+||+|....+|+.||+|++... .....+.|.+|+.+++.++||||+++++++...+.+++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 4677888999999999999999888999999987643 244567899999999999999999999999999999999999
Q ss_pred cCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhh
Q 003278 190 MPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLE 269 (834)
Q Consensus 190 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~ 269 (834)
+++|+|..++... .++++.....++.+++.||.|||+. .+++||||||+||++++++.++|+|||++....
T Consensus 85 ~~~~~L~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~ 155 (284)
T cd06620 85 MDCGSLDRIYKKG-------GPIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSRGQIKLCDFGVSGELI 155 (284)
T ss_pred CCCCCHHHHHHhc-------cCCCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHHEEECCCCcEEEccCCcccchh
Confidence 9999999887542 3589999999999999999999973 389999999999999999999999999986432
Q ss_pred hhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCc-----cc
Q 003278 270 HELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDD-----QI 344 (834)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~-----~~ 344 (834)
.. ......||..|+|||++..+ .++.++|||||||++|||+||+.||+.....+ ..
T Consensus 156 ~~------------------~~~~~~~~~~~~aPE~~~~~-~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~ 216 (284)
T cd06620 156 NS------------------IADTFVGTSTYMSPERIQGG-KYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPM 216 (284)
T ss_pred hh------------------ccCccccCcccCCHHHHccC-CCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhh
Confidence 11 01234689999999988655 67889999999999999999999997544321 11
Q ss_pred hHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHh
Q 003278 345 ILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAV 405 (834)
Q Consensus 345 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l 405 (834)
.+..++.....+. .+.+.... ....+.+++..|++.||++||++.+|++..
T Consensus 217 ~~~~~~~~~~~~~------~~~~~~~~----~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 217 GILDLLQQIVQEP------PPRLPSSD----FPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred HHHHHHHHHhhcc------CCCCCchh----cCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 1223333322111 11111111 123578899999999999999999999763
No 271
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=6.8e-37 Score=335.95 Aligned_cols=242 Identities=19% Similarity=0.226 Sum_probs=189.0
Q ss_pred cccccCCcEEEEEEE-CCCcEEEEEEecCCC--ChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEeccCCCc
Q 003278 520 RVAEMDFGTAYQGFL-DNHQYVLVKRLGMSK--CPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRI 596 (834)
Q Consensus 520 ~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~~g~ 596 (834)
.||+|+||.||++.. .++..||+|.+.... .......+.+|++++..++||||+++++++...+..++||||+++|+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~ 81 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCc
Confidence 589999999999985 568899999986432 22234567889999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCCCC
Q 003278 597 LSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGH 676 (834)
Q Consensus 597 L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~~~ 676 (834)
|..++.... .+++.....++.|++.||+|||+. .+|+||||||+|||+++++.+||+|||+++......
T Consensus 82 L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~lH~~--~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~--- 150 (325)
T cd05594 82 LFFHLSRER------VFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG--- 150 (325)
T ss_pred HHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC---
Confidence 988875432 478889999999999999999962 589999999999999999999999999987532211
Q ss_pred cccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCccccccccc
Q 003278 677 RKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLS 756 (834)
Q Consensus 677 ~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 756 (834)
.......||+.|||||++.++.++.++|||||||+||||+||+.||........ ... ..... ..
T Consensus 151 ----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~-~~~---i~~~~--------~~ 214 (325)
T cd05594 151 ----ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL-FEL---ILMEE--------IR 214 (325)
T ss_pred ----cccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHH-HHH---HhcCC--------CC
Confidence 112245799999999999999999999999999999999999999864332211 111 10000 01
Q ss_pred cCCCCCHHHHHHHHHHHHHhccCCCCCCC-----ChhHHHH
Q 003278 757 LNGEYNHKELMRLIKLGIACTLSNPELRP-----SMRQILS 792 (834)
Q Consensus 757 l~~~~~~~~~~~l~~l~~~C~~~~P~~RP-----tm~~v~~ 792 (834)
+....+ .++ ..+..+||+.||++|| ++.++++
T Consensus 215 ~p~~~~-~~~---~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 215 FPRTLS-PEA---KSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred CCCCCC-HHH---HHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 111222 333 4455589999999997 8888874
No 272
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.2e-36 Score=324.03 Aligned_cols=257 Identities=22% Similarity=0.357 Sum_probs=199.3
Q ss_pred hCcCcCCcccccCCcEEEEEEEC----CCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLD----NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVI 588 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv 588 (834)
++|...+.||+|+||.||+|... .+..+|+|.++........+.|.+|+.++.+++||||+++++++...+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 35666788999999999999863 23379999887655555567899999999999999999999999999999999
Q ss_pred EeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccc
Q 003278 589 YDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEF 668 (834)
Q Consensus 589 ~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~ 668 (834)
|||+++++|.+++.... ..+++..++.|+.|++.||+|||+ .+++||||||+|||++.++.+|++|||++..
T Consensus 84 ~e~~~~~~L~~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~~l~dfg~~~~ 155 (267)
T cd05066 84 TEYMENGSLDAFLRKHD-----GQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILVNSNLVCKVSDFGLSRV 155 (267)
T ss_pred EEcCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEeehhhchhcEEECCCCeEEeCCCCcccc
Confidence 99999999999986542 247889999999999999999996 6899999999999999999999999999986
Q ss_pred cccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcC
Q 003278 669 LTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKR 747 (834)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~ 747 (834)
+....... .......++..|+|||++.++.++.++|||||||++||+++ |..|+....+.. ....... ..+
T Consensus 156 ~~~~~~~~----~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~-~~~~~~~---~~~ 227 (267)
T cd05066 156 LEDDPEAA----YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD-VIKAIEE---GYR 227 (267)
T ss_pred ccccccee----eecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH-HHHHHhC---CCc
Confidence 54321110 01112234568999999998899999999999999999887 999986433322 1111111 000
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHcc
Q 003278 748 PLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDG 796 (834)
Q Consensus 748 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~ 796 (834)
....... + ..+.+++.+||+.+|.+||||.+|++.|+.
T Consensus 228 -------~~~~~~~-~---~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 265 (267)
T cd05066 228 -------LPAPMDC-P---AALHQLMLDCWQKDRNERPKFEQIVSILDK 265 (267)
T ss_pred -------CCCCCCC-C---HHHHHHHHHHcccCchhCCCHHHHHHHHHh
Confidence 0011111 1 245567779999999999999999999865
No 273
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.5e-36 Score=327.45 Aligned_cols=262 Identities=18% Similarity=0.234 Sum_probs=189.2
Q ss_pred CcCcCCcccccCCcEEEEEEE--CCCcEEEEEEecCCCC-hhHHHHHHHHHHHHHhc---cCCCceeEEEEEe-----eC
Q 003278 514 NFSESQRVAEMDFGTAYQGFL--DNHQYVLVKRLGMSKC-PALRTRFSNELQNLARL---RHRNLVQLCGWCT-----EQ 582 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~--~~~~~vavK~~~~~~~-~~~~~~f~~E~~~l~~l---~HpNiv~l~g~~~-----~~ 582 (834)
+|...+.||+|+||.||+|.. .++..||||.+..... ......+.+|+.+++++ +||||++++++|. ..
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 466678899999999999985 3467899998865432 22234566788777766 6999999999985 24
Q ss_pred CeEEEEEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEee
Q 003278 583 GEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGS 662 (834)
Q Consensus 583 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~D 662 (834)
...++||||++ ++|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~~~~----~~~~~~~~~~i~~qi~~aL~~lH~---~~iiH~dlkp~Nil~~~~~~~kl~D 153 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDKVPE----PGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLAD 153 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEcCCCCEEEcc
Confidence 56899999997 588888764321 247889999999999999999996 6999999999999999999999999
Q ss_pred eeeccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHH
Q 003278 663 FALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEF 742 (834)
Q Consensus 663 fGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~ 742 (834)
||+++..... .......||+.|+|||++.+..++.++|||||||++|||+||+.||........+.. +.+.
T Consensus 154 fg~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~-i~~~ 224 (290)
T cd07862 154 FGLARIYSFQ--------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGK-ILDV 224 (290)
T ss_pred ccceEeccCC--------cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHH-HHHH
Confidence 9999764321 112345789999999999988999999999999999999999999875443332222 2111
Q ss_pred HhhcC--cccc---ccccccC--CCCCHHH-----HHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 743 EARKR--PLAE---LVDLSLN--GEYNHKE-----LMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 743 ~~~~~--~~~~---~~d~~l~--~~~~~~~-----~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
..... .+.. +....+. .....+. -..+.+++.+|++.||++|||+.++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 225 IGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 10000 0000 0000000 0000000 123456777999999999999999984
No 274
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-37 Score=333.30 Aligned_cols=262 Identities=24% Similarity=0.361 Sum_probs=202.7
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC-hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEc
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDY 189 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 189 (834)
......++||+|-||+|.+|.. ..+..||||.++... .....+|..|+++|.+|+|||||+|+|.|..++.+++|+||
T Consensus 538 s~L~~~ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EY 616 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEV-EGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEY 616 (807)
T ss_pred hheehhhhhcCcccceeEEEEe-cCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHH
Confidence 4455668999999999999998 457999999998654 34568999999999999999999999999999999999999
Q ss_pred cCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhh
Q 003278 190 MPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLE 269 (834)
Q Consensus 190 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~ 269 (834)
|++|+|.++|..+.... +.-....+|+.|||.||+||.+- ++|||||.+.|+|+|.++++||+|||++|-+.
T Consensus 617 mEnGDLnqFl~aheapt-----~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~ly 688 (807)
T KOG1094|consen 617 MENGDLNQFLSAHELPT-----AETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLY 688 (807)
T ss_pred HhcCcHHHHHHhccCcc-----cccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccc
Confidence 99999999997652211 23345578999999999999985 99999999999999999999999999999664
Q ss_pred hhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh--CCccCCCCCCCccchHH
Q 003278 270 HELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS--GRRAVDLTYPDDQIILL 347 (834)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt--G~~p~~~~~~~~~~~l~ 347 (834)
....+.. ..+.+=...|||||.+..+ .+|.+||||+|||++||+++ ..+|+.....+ ..+
T Consensus 689 sg~yy~v--------------qgr~vlpiRwmawEsillg-kFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e---~vv 750 (807)
T KOG1094|consen 689 SGDYYRV--------------QGRAVLPIRWMAWESILLG-KFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE---QVV 750 (807)
T ss_pred cCCceee--------------ecceeeeeeehhHHHHHhc-cccchhhhhhhHHHHHHHHHHHhhCchhhhhHH---HHH
Confidence 4332211 2233446889999999887 57999999999999999875 66676532211 122
Q ss_pred HHHHHHhhcCccccc-cccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhc
Q 003278 348 DWIRRLSDEGKVLQA-GDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSG 407 (834)
Q Consensus 348 ~~~~~~~~~~~~~~~-~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~ 407 (834)
+-...++..+-.... ..|+ .....+.++++.||..+-.+||+++++...|..
T Consensus 751 en~~~~~~~~~~~~~l~~P~--------~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~ 803 (807)
T KOG1094|consen 751 ENAGEFFRDQGRQVVLSRPP--------ACPQGLYELMLRCWRRESEQRPSFEQLHLFLQE 803 (807)
T ss_pred HhhhhhcCCCCcceeccCCC--------cCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHH
Confidence 222333322211111 1111 223568899999999999999999999887754
No 275
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=8.5e-37 Score=325.55 Aligned_cols=257 Identities=23% Similarity=0.333 Sum_probs=188.1
Q ss_pred eeeccCCeEEEEEEECC--CCeEEEEEEeccc-ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEccCCCC
Q 003278 118 VLGSGGFGKVYRAVLPS--DGTVVAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRS 194 (834)
Q Consensus 118 ~LG~G~fG~Vy~~~~~~--~g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gs 194 (834)
.||+|+||.||+|.... ....+|+|.+... .......|.+|+.+++.++||||++++++|...+..++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 68999999999997532 3457899987543 23445678899999999999999999999999999999999999999
Q ss_pred HhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhhhh
Q 003278 195 LDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQY 274 (834)
Q Consensus 195 L~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~ 274 (834)
|.+++....... ....++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 82 L~~~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~ 156 (269)
T cd05042 82 LKNYLRSNRGMV--AQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYY 156 (269)
T ss_pred HHHHHHhccccc--cccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchhe
Confidence 999997643211 23456888899999999999999986 9999999999999999999999999998643221100
Q ss_pred hhhcccccccccccccceeeeccccCCCcccccc------CCCCCcccceeehhhHHHHHHh-CCccCCCCCCCccchHH
Q 003278 275 QMRTSSARNHQFHLAETTRIGGTIGYLPPESFQK------GSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQIILL 347 (834)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~------~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~~l~ 347 (834)
.......+++.|+|||++.. ...++.++|||||||++|||++ |..|+...... . .
T Consensus 157 --------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~--~-~- 218 (269)
T cd05042 157 --------------ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDE--Q-V- 218 (269)
T ss_pred --------------eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHH--H-H-
Confidence 00122346788999998743 2346789999999999999999 67776532211 1 1
Q ss_pred HHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhh
Q 003278 348 DWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVS 406 (834)
Q Consensus 348 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~ 406 (834)
......++ .....++.+. ..+ ...+..+...|| .||++||++.+|++.|+
T Consensus 219 --~~~~~~~~-~~~~~~~~~~-~~~----~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 219 --LKQVVREQ-DIKLPKPQLD-LKY----SDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred --HHHHhhcc-CccCCCCccc-ccC----CHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 11111111 1112222211 111 234566778888 49999999999998864
No 276
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.7e-36 Score=326.92 Aligned_cols=266 Identities=24% Similarity=0.390 Sum_probs=202.3
Q ss_pred hhcCCCCCCCeeeccCCeEEEEEEECC-----CCeEEEEEEecccC-hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCC
Q 003278 108 IGSNGFDEDEVLGSGGFGKVYRAVLPS-----DGTVVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHED 181 (834)
Q Consensus 108 ~~t~~f~~~~~LG~G~fG~Vy~~~~~~-----~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~ 181 (834)
+++++|+..+.||+|+||.||+|..+. .+..||+|.+.... ......+.+|+.+++.++||||+++++++...+
T Consensus 3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (288)
T cd05061 3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ 82 (288)
T ss_pred ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 456789999999999999999997642 35689999876443 233456889999999999999999999999999
Q ss_pred EEEEEEEccCCCCHhHHHhcCCCcc---ccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceE
Q 003278 182 QLLLVYDYMPNRSLDRVLFRRPENL---EAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNAR 258 (834)
Q Consensus 182 ~~~lV~Ey~~~gsL~~~l~~~~~~~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~k 258 (834)
..++||||+++|+|.+++....... .....+++.....++.|++.||.|||+. +|+||||||+|||+++++.+|
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~~ 159 (288)
T cd05061 83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVK 159 (288)
T ss_pred CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcEE
Confidence 9999999999999999997532211 1124567888999999999999999985 999999999999999999999
Q ss_pred EeeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCC
Q 003278 259 LGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDL 337 (834)
Q Consensus 259 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~ 337 (834)
|+|||+++.+...... .......++..|+|||.+..+ .++.++|||||||++|||++ |..|+..
T Consensus 160 L~Dfg~~~~~~~~~~~--------------~~~~~~~~~~~y~~pE~~~~~-~~~~~~DvwslG~~l~el~~~~~~p~~~ 224 (288)
T cd05061 160 IGDFGMTRDIYETDYY--------------RKGGKGLLPVRWMAPESLKDG-VFTTSSDMWSFGVVLWEITSLAEQPYQG 224 (288)
T ss_pred ECcCCccccccccccc--------------cccCCCcccccccCHHHhccC-CCChHhHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999754321100 001223457789999998655 57899999999999999999 6777753
Q ss_pred CCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcC
Q 003278 338 TYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGS 408 (834)
Q Consensus 338 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~ 408 (834)
.... ++...... +.... .. ......+.+++..|++.+|++||+|.++++.|...
T Consensus 225 ~~~~------~~~~~~~~-~~~~~-----~~-----~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 225 LSNE------QVLKFVMD-GGYLD-----QP-----DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred CCHH------HHHHHHHc-CCCCC-----CC-----CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 2211 11111111 11111 00 01124688999999999999999999999998764
No 277
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=2.2e-36 Score=320.48 Aligned_cols=250 Identities=24% Similarity=0.363 Sum_probs=192.6
Q ss_pred eeeccCCeEEEEEEEC--CCCeEEEEEEecccC-hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEccCCCC
Q 003278 118 VLGSGGFGKVYRAVLP--SDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRS 194 (834)
Q Consensus 118 ~LG~G~fG~Vy~~~~~--~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gs 194 (834)
.||+|+||.||+|.+. .++..||||.+.... ....+.|.+|+.++++++||||++++++|. .+..++||||+++|+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 3899999999999874 445679999986543 334567999999999999999999999885 457899999999999
Q ss_pred HhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhhhh
Q 003278 195 LDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQY 274 (834)
Q Consensus 195 L~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~ 274 (834)
|.+++... ...+++..+++++.|++.||.|||+. +++||||||+|||++.++.+||+|||+++.+......
T Consensus 81 L~~~l~~~------~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~ 151 (257)
T cd05115 81 LNKFLSGK------KDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSY 151 (257)
T ss_pred HHHHHHhC------CCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCccc
Confidence 99998643 23689999999999999999999985 9999999999999999999999999999754322110
Q ss_pred hhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCccchHHHHHHHH
Q 003278 275 QMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQIILLDWIRRL 353 (834)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~~l~~~~~~~ 353 (834)
....+...+++.|+|||.+... .++.++|||||||++||+++ |+.|+...... ++...
T Consensus 152 -------------~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~------~~~~~- 210 (257)
T cd05115 152 -------------YKARSAGKWPLKWYAPECINFR-KFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP------EVMSF- 210 (257)
T ss_pred -------------eeccCCCCCCcccCCHHHHccC-CCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH------HHHHH-
Confidence 0001112246789999988654 57889999999999999996 99998643211 11111
Q ss_pred hhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcC
Q 003278 354 SDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGS 408 (834)
Q Consensus 354 ~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~ 408 (834)
...+...+. +......+.+++..||+.+|++||+|.+|.+.|...
T Consensus 211 ~~~~~~~~~----------~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 211 IEQGKRLDC----------PAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred HHCCCCCCC----------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 122221111 011125678899999999999999999999998764
No 278
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.2e-36 Score=334.12 Aligned_cols=245 Identities=27% Similarity=0.315 Sum_probs=188.5
Q ss_pred CeeeccCCeEEEEEEECCCCeEEEEEEecccC---hhhHHHHHHHH-HHHHhCCCCceeeEeeeEEeCCEEEEEEEccCC
Q 003278 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAEL-VAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPN 192 (834)
Q Consensus 117 ~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~---~~~~~~~~~E~-~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 192 (834)
+.||+|+||.||+|+...++..||+|++.... ......+..|. .+++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 47999999999999998899999999986532 12233444454 457889999999999999999999999999999
Q ss_pred CCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhh
Q 003278 193 RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHEL 272 (834)
Q Consensus 193 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~ 272 (834)
|+|..++... ..+++.....++.|+++||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~L~~~~~~~-------~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~- 149 (325)
T cd05602 81 GELFYHLQRE-------RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH- 149 (325)
T ss_pred CcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccC-
Confidence 9999988643 3467788888999999999999985 9999999999999999999999999998742111
Q ss_pred hhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHHHH
Q 003278 273 QYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIRR 352 (834)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~~~ 352 (834)
........||+.|+|||.+... .++.++|||||||++|||++|+.||..... ..+.. .
T Consensus 150 ---------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~---~~~~~---~ 207 (325)
T cd05602 150 ---------------NGTTSTFCGTPEYLAPEVLHKQ-PYDRTVDWWCLGAVLYEMLYGLPPFYSRNT---AEMYD---N 207 (325)
T ss_pred ---------------CCCcccccCCccccCHHHHcCC-CCCCccccccccHHHHHHhcCCCCCCCCCH---HHHHH---H
Confidence 0113445799999999988654 678999999999999999999999864221 11111 1
Q ss_pred HhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhh
Q 003278 353 LSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVS 406 (834)
Q Consensus 353 ~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~ 406 (834)
.... .. ...+. . ...+.++...|++.+|.+||+..+.+..+.
T Consensus 208 i~~~-~~--~~~~~-----~----~~~~~~li~~~l~~~p~~R~~~~~~~~~i~ 249 (325)
T cd05602 208 ILNK-PL--QLKPN-----I----TNSARHLLEGLLQKDRTKRLGAKDDFMEIK 249 (325)
T ss_pred HHhC-Cc--CCCCC-----C----CHHHHHHHHHHcccCHHHCCCCCCCHHHHh
Confidence 1111 00 01111 1 135778899999999999999886554443
No 279
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=2e-36 Score=328.65 Aligned_cols=258 Identities=23% Similarity=0.316 Sum_probs=200.5
Q ss_pred hCcCcCCcccccCCcEEEEEEEC------CCcEEEEEEecCCCChhHHHHHHHHHHHHHhc-cCCCceeEEEEEeeCCeE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLD------NHQYVLVKRLGMSKCPALRTRFSNELQNLARL-RHRNLVQLCGWCTEQGEM 585 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l-~HpNiv~l~g~~~~~~~~ 585 (834)
++|...+.||+|+||.||+|... .+..||||.++........+.|.+|+.+++++ +||||++++++|...+..
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 114 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPI 114 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCce
Confidence 46788899999999999999741 24579999887554445557899999999999 799999999999999999
Q ss_pred EEEEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeee
Q 003278 586 LVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFAL 665 (834)
Q Consensus 586 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGl 665 (834)
++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+|++|||+
T Consensus 115 ~lv~e~~~~~~L~~~i~~~~~----~~l~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~dfg~ 187 (302)
T cd05055 115 LVITEYCCYGDLLNFLRRKRE----SFLTLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNVLLTHGKIVKICDFGL 187 (302)
T ss_pred EEEEEcCCCCcHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeehhhhccceEEEcCCCeEEECCCcc
Confidence 999999999999999864321 237899999999999999999996 6899999999999999999999999999
Q ss_pred ccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHh
Q 003278 666 AEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEA 744 (834)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~ 744 (834)
++.+...... .......++..|+|||++.++.++.++|||||||++|||+| |..|+...............
T Consensus 188 ~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~--- 259 (302)
T cd05055 188 ARDIMNDSNY-----VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKE--- 259 (302)
T ss_pred cccccCCCce-----eecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHc---
Confidence 9765332110 01122356788999999999999999999999999999998 88887643332222111110
Q ss_pred hcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHcc
Q 003278 745 RKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDG 796 (834)
Q Consensus 745 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~ 796 (834)
.... ..... ... ++.+++.+||+.+|++|||+.+|++.|+.
T Consensus 260 ~~~~-------~~~~~-~~~---~~~~li~~cl~~~p~~Rpt~~ell~~l~~ 300 (302)
T cd05055 260 GYRM-------AQPEH-APA---EIYDIMKTCWDADPLKRPTFKQIVQLIGK 300 (302)
T ss_pred CCcC-------CCCCC-CCH---HHHHHHHHHcCCCchhCcCHHHHHHHHHh
Confidence 0000 00111 112 45566679999999999999999999864
No 280
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=2.2e-36 Score=321.72 Aligned_cols=260 Identities=19% Similarity=0.291 Sum_probs=201.4
Q ss_pred CcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCC--ChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEe
Q 003278 514 NFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSK--CPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYD 590 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~E 590 (834)
+|...+.||.|+||.||+|.. .++..++||.+.... ......+|.+|+.++++++||||+++++++.+.+..+++||
T Consensus 3 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 82 (267)
T cd08229 3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE 82 (267)
T ss_pred hhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEE
Confidence 566677899999999999995 578899999876432 23345689999999999999999999999999999999999
Q ss_pred ccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccc
Q 003278 591 YSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLT 670 (834)
Q Consensus 591 y~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~ 670 (834)
|+++++|.+++..... ....++|.....++.|++.||+|||+ .+|+|+||||+||+++.++.++++|||++....
T Consensus 83 ~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd08229 83 LADAGDLSRMIKHFKK--QKRLIPEKTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred ecCCCCHHHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEECcchhhhccc
Confidence 9999999998864322 12358899999999999999999996 699999999999999999999999999987653
Q ss_pred cCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCccc
Q 003278 671 RNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLA 750 (834)
Q Consensus 671 ~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (834)
... .......|+..|+|||++.+..++.++||||||+++|||+||..|+........ ...... .
T Consensus 158 ~~~-------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~-------~ 221 (267)
T cd08229 158 SKT-------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY--SLCKKI-------E 221 (267)
T ss_pred cCC-------cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHH--HHhhhh-------h
Confidence 221 111235689999999999988899999999999999999999999854322111 100111 0
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccC
Q 003278 751 ELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGN 797 (834)
Q Consensus 751 ~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~ 797 (834)
....+.+....... .+..++.+||+.||++||||.+|++++...
T Consensus 222 ~~~~~~~~~~~~~~---~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 222 QCDYPPLPSDHYSE---ELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred cCCCCCCCcccccH---HHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 11111111111223 345566699999999999999999988653
No 281
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.4e-36 Score=322.87 Aligned_cols=240 Identities=21% Similarity=0.354 Sum_probs=183.9
Q ss_pred CcccccCCcEEEEEEECC-------------CcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeE
Q 003278 519 QRVAEMDFGTAYQGFLDN-------------HQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEM 585 (834)
Q Consensus 519 ~~ig~g~~g~vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~ 585 (834)
+.||+|+||.||+|.+.. ...|++|.+.... ......|.+|+.+++.++|||||+++|++.+....
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~ 79 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH-RDISLAFFETASMMRQVSHKHIVLLYGVCVRDVEN 79 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh-hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 358999999999998632 2258888876433 23346788999999999999999999999999999
Q ss_pred EEEEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCC-------c
Q 003278 586 LVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMN-------P 658 (834)
Q Consensus 586 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~-------~ 658 (834)
++||||+++|+|..++.... ..+++..++.++.|+++||+|||+ .+|+||||||+|||++.++. +
T Consensus 80 ~lv~e~~~~~~l~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~~~~~~~~ 151 (262)
T cd05077 80 IMVEEFVEFGPLDLFMHRKS-----DVLTTPWKFKVAKQLASALSYLED---KDLVHGNVCTKNILLAREGIDGECGPFI 151 (262)
T ss_pred EEEEecccCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHhhh---CCeECCCCCcccEEEecCCccCCCCcee
Confidence 99999999999988876432 247888899999999999999996 69999999999999987664 8
Q ss_pred eEeeeeeccccccCCCCCcccccCccccccccCccchhccc-cCCCCccCcchhhHHHHHHHH-hCCCccCCCCCchhHH
Q 003278 659 RLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIE-SGEATSMADVYSFGVVVLEVV-TGQMAVDFRLPEGLLV 736 (834)
Q Consensus 659 ki~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~-~~~~~~k~DV~SfGvvl~E~~-tG~~p~~~~~~~~~~~ 736 (834)
|++|||++..... .....||..|||||++. +..++.++|||||||++|||+ +|..|+.......
T Consensus 152 ~l~d~g~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~--- 217 (262)
T cd05077 152 KLSDPGIPITVLS-----------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE--- 217 (262)
T ss_pred EeCCCCCCccccC-----------cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH---
Confidence 9999999865321 11245788999999986 466899999999999999998 5777765322111
Q ss_pred HHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHc
Q 003278 737 KRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795 (834)
Q Consensus 737 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~ 795 (834)
...+..... ... .. .. ..+..++.+||+.||++||++.+|++.|+
T Consensus 218 --~~~~~~~~~---~~~-----~~-~~---~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 218 --KERFYEGQC---MLV-----TP-SC---KELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred --HHHHHhcCc---cCC-----CC-Ch---HHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 111111100 011 01 12 24556777999999999999999998774
No 282
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.5e-36 Score=335.66 Aligned_cols=265 Identities=25% Similarity=0.397 Sum_probs=199.4
Q ss_pred CCCCCCCeeeccCCeEEEEEEE-----CCCCeEEEEEEecccC-hhhHHHHHHHHHHHHhC-CCCceeeEeeeEEeC-CE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVL-----PSDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHL-RHRNLVRLRGWCVHE-DQ 182 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~-----~~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~-~~ 182 (834)
++|+..+.||+|+||.||+|.+ ..+++.||||+++... ......+.+|+.++.++ +|||||+++++|... ..
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 86 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence 5688999999999999999974 2467899999986532 33456788999999999 689999999988765 46
Q ss_pred EEEEEEccCCCCHhHHHhcCCCcc--------------------------------------------------------
Q 003278 183 LLLVYDYMPNRSLDRVLFRRPENL-------------------------------------------------------- 206 (834)
Q Consensus 183 ~~lV~Ey~~~gsL~~~l~~~~~~~-------------------------------------------------------- 206 (834)
.++||||+++|+|.+++.......
T Consensus 87 ~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (343)
T cd05103 87 LMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA 166 (343)
T ss_pred eEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhh
Confidence 799999999999999986532100
Q ss_pred ----ccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhhhhhhhccccc
Q 003278 207 ----EAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQMRTSSAR 282 (834)
Q Consensus 207 ----~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~ 282 (834)
.....++|.++..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.+......
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-------- 235 (343)
T cd05103 167 EQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY-------- 235 (343)
T ss_pred hhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcch--------
Confidence 0013578999999999999999999985 9999999999999999999999999999754221110
Q ss_pred ccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCccchHHHHHHHHhhcCcccc
Q 003278 283 NHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQIILLDWIRRLSDEGKVLQ 361 (834)
Q Consensus 283 ~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 361 (834)
.......+++.|+|||.+... .++.++|||||||++|||++ |..|+........ + ......+....
T Consensus 236 ------~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~--~----~~~~~~~~~~~ 302 (343)
T cd05103 236 ------VRKGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--F----CRRLKEGTRMR 302 (343)
T ss_pred ------hhcCCCCCCcceECcHHhcCC-CCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH--H----HHHHhccCCCC
Confidence 011223467789999988654 67899999999999999997 8888754322111 1 11111221111
Q ss_pred ccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcCC
Q 003278 362 AGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGSY 409 (834)
Q Consensus 362 ~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~~ 409 (834)
. ... ....+.+++..||+.+|++||++.+|++.|...+
T Consensus 303 ~-------~~~---~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~ 340 (343)
T cd05103 303 A-------PDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 340 (343)
T ss_pred C-------CCC---CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 1 011 1135788999999999999999999999987653
No 283
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=1.3e-36 Score=326.87 Aligned_cols=268 Identities=24% Similarity=0.354 Sum_probs=196.4
Q ss_pred CCCCCeeeccCCeEEEEEEE----CCCCeEEEEEEecccC-hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeC--CEEEE
Q 003278 113 FDEDEVLGSGGFGKVYRAVL----PSDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHE--DQLLL 185 (834)
Q Consensus 113 f~~~~~LG~G~fG~Vy~~~~----~~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~--~~~~l 185 (834)
|...+.||+|+||+||++.. ..++..||+|.+.... ......|.+|+.++++++||||++++++|... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 37778999999999987653 3568899999986542 23456788999999999999999999998764 35899
Q ss_pred EEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccch
Q 003278 186 VYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLA 265 (834)
Q Consensus 186 V~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 265 (834)
||||+++|+|.+++.. ..++|..+..++.|++.||.|||+. +|+||||||+|||+++++.+||+|||++
T Consensus 86 v~e~~~~~~l~~~~~~--------~~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~ 154 (283)
T cd05080 86 IMEYVPLGSLRDYLPK--------HKLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLA 154 (283)
T ss_pred EecCCCCCCHHHHHHH--------cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccc
Confidence 9999999999999853 2489999999999999999999985 9999999999999999999999999999
Q ss_pred hhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccch
Q 003278 266 RWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII 345 (834)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~ 345 (834)
+.+....... .......++..|+|||.+..+ ..+.++|||||||++|||+||+.|+......-. .
T Consensus 155 ~~~~~~~~~~-------------~~~~~~~~~~~~~~PE~~~~~-~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~-~ 219 (283)
T cd05080 155 KAVPEGHEYY-------------RVREDGDSPVFWYAVECLKEN-KFSYASDVWSFGVTLYELLTHCDSKQSPPKKFE-E 219 (283)
T ss_pred cccCCcchhh-------------ccCCCCCCCceeeCHhHhccc-CCCcccccHHHHHHHHHHHhCCCCCCCCcchhh-h
Confidence 8654321100 001122356779999988654 578999999999999999999999754321100 0
Q ss_pred HHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhc
Q 003278 346 LLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSG 407 (834)
Q Consensus 346 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~ 407 (834)
+..+...........+..+.... ...+......+.+++..||+.+|++||+|.+|++.|+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~ 280 (283)
T cd05080 220 MIGPKQGQMTVVRLIELLERGMR-LPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKE 280 (283)
T ss_pred hhcccccccchhhhhhhhhcCCC-CCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence 00000000000001111111110 00011123468899999999999999999999998865
No 284
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=6.2e-37 Score=335.24 Aligned_cols=244 Identities=23% Similarity=0.226 Sum_probs=189.4
Q ss_pred CcccccCCcEEEEEEE----CCCcEEEEEEecCCCC-hhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEeccC
Q 003278 519 QRVAEMDFGTAYQGFL----DNHQYVLVKRLGMSKC-PALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSA 593 (834)
Q Consensus 519 ~~ig~g~~g~vy~~~~----~~~~~vavK~~~~~~~-~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~ 593 (834)
+.||+|+||.||++.. .+++.+|+|++..... ......+.+|+++|++++|||||++++++.+.+..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 4689999999999874 3578999999864321 2233567889999999999999999999999999999999999
Q ss_pred CCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCC
Q 003278 594 TRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRND 673 (834)
Q Consensus 594 ~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~ 673 (834)
+|+|.+++.... .+++.....++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++......
T Consensus 82 ~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~ 152 (318)
T cd05582 82 GGDLFTRLSKEV------MFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 152 (318)
T ss_pred CCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC
Confidence 999998885432 47889999999999999999996 699999999999999999999999999987543211
Q ss_pred CCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCcccccc
Q 003278 674 HGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELV 753 (834)
Q Consensus 674 ~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (834)
.......||+.|||||++.+..++.++|||||||++|||+||+.|+........ ... .......
T Consensus 153 -------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~-~~~---i~~~~~~----- 216 (318)
T cd05582 153 -------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKET-MTM---ILKAKLG----- 216 (318)
T ss_pred -------CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHH-HHH---HHcCCCC-----
Confidence 112346799999999999988899999999999999999999999865432211 111 1111111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhH--HHHHH
Q 003278 754 DLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQ--ILSIL 794 (834)
Q Consensus 754 d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~--v~~~L 794 (834)
++... ... +..++.+||+.||++|||+.+ +.+.+
T Consensus 217 ---~p~~~-~~~---~~~li~~~l~~~P~~R~~a~~~~~~~~~ 252 (318)
T cd05582 217 ---MPQFL-SPE---AQSLLRALFKRNPANRLGAGPDGVEEIK 252 (318)
T ss_pred ---CCCCC-CHH---HHHHHHHHhhcCHhHcCCCCCCCHHHHh
Confidence 11111 223 344556899999999999766 44444
No 285
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.4e-36 Score=327.06 Aligned_cols=247 Identities=23% Similarity=0.316 Sum_probs=193.3
Q ss_pred CCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC---hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEc
Q 003278 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDY 189 (834)
Q Consensus 113 f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 189 (834)
|+..+.||+|+||+||+|.+..+++.||+|.+.... ......+.+|+.++++++|+||+.+++++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 666789999999999999998899999999986432 22345578899999999999999999999999999999999
Q ss_pred cCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhh
Q 003278 190 MPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLE 269 (834)
Q Consensus 190 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~ 269 (834)
+++|+|..++.... ...+++..+..++.|++.||.|||+. +|+||||||+|||+++++.+||+|||++....
T Consensus 82 ~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~ 153 (285)
T cd05632 82 MNGGDLKFHIYNMG-----NPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIP 153 (285)
T ss_pred ccCccHHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecC
Confidence 99999998886432 23689999999999999999999985 99999999999999999999999999986432
Q ss_pred hhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHH
Q 003278 270 HELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDW 349 (834)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~ 349 (834)
... ......||+.|+|||++... .++.++|||||||++|||+||+.||....... ....+
T Consensus 154 ~~~-----------------~~~~~~g~~~~~aPE~~~~~-~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~--~~~~~ 213 (285)
T cd05632 154 EGE-----------------SIRGRVGTVGYMAPEVLNNQ-RYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV--KREEV 213 (285)
T ss_pred CCC-----------------cccCCCCCcCccChHHhcCC-CCCcccchHHHHHHHHHHHhCCCCCCCCCHHH--HHHHH
Confidence 110 01234689999999998654 67899999999999999999999986432211 11111
Q ss_pred HHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchh
Q 003278 350 IRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMK 399 (834)
Q Consensus 350 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~ 399 (834)
.... .... .. .. ..+ ...+.+|+..|++.||++||++.
T Consensus 214 ~~~~-~~~~--~~----~~-~~~----~~~~~~li~~~l~~~P~~R~~~~ 251 (285)
T cd05632 214 DRRV-LETE--EV----YS-AKF----SEEAKSICKMLLTKDPKQRLGCQ 251 (285)
T ss_pred HHhh-hccc--cc----cC-ccC----CHHHHHHHHHHccCCHhHcCCCc
Confidence 1111 1110 00 00 111 23567899999999999999954
No 286
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.2e-36 Score=326.46 Aligned_cols=257 Identities=18% Similarity=0.277 Sum_probs=197.3
Q ss_pred hCcCcCCcccccCCcEEEEEEE-CCCc----EEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFL-DNHQ----YVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLV 587 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~-~~~~----~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~l 587 (834)
++|...+.||+|+||+||+|.. .++. .||+|.+...........+.+|+.++.+++||||++++|+|... ..++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~l 85 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQL 85 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcEE
Confidence 4577778999999999999984 3444 48999987655555567899999999999999999999999764 5778
Q ss_pred EEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecc
Q 003278 588 IYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAE 667 (834)
Q Consensus 588 v~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~ 667 (834)
++||+++|+|.+++.... ..+++..++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++
T Consensus 86 ~~~~~~~g~l~~~l~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~---~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~ 157 (279)
T cd05109 86 VTQLMPYGCLLDYVRENK-----DRIGSQDLLNWCVQIAKGMSYLEE---VRLVHRDLAARNVLVKSPNHVKITDFGLAR 157 (279)
T ss_pred EEEcCCCCCHHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEcCCCcEEECCCCcee
Confidence 999999999999986532 247889999999999999999996 689999999999999999999999999998
Q ss_pred ccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhc
Q 003278 668 FLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARK 746 (834)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~ 746 (834)
.+..... ........++..|||||.+.++.++.++|||||||++|||+| |..|+...... .....+. ...
T Consensus 158 ~~~~~~~-----~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-~~~~~~~---~~~ 228 (279)
T cd05109 158 LLDIDET-----EYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR-EIPDLLE---KGE 228 (279)
T ss_pred ecccccc-----eeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHH---CCC
Confidence 6542211 000112235678999999998999999999999999999999 88887643221 1111111 111
Q ss_pred CccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccCC
Q 003278 747 RPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGND 798 (834)
Q Consensus 747 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~~ 798 (834)
.+ ...... .. .+.+++.+||+.||++|||+.++++.|+...
T Consensus 229 ~~-------~~~~~~-~~---~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~ 269 (279)
T cd05109 229 RL-------PQPPIC-TI---DVYMIMVKCWMIDSECRPRFRELVDEFSRMA 269 (279)
T ss_pred cC-------CCCccC-CH---HHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 10 001111 12 4556667999999999999999999886543
No 287
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=7.7e-37 Score=328.79 Aligned_cols=262 Identities=18% Similarity=0.278 Sum_probs=197.8
Q ss_pred CcCcCCcccccCCcEEEEEEE-----CCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeC--CeEE
Q 003278 514 NFSESQRVAEMDFGTAYQGFL-----DNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQ--GEML 586 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~-----~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~--~~~~ 586 (834)
.|...+.||+|+||.||.+.+ .++..||+|.+...........|.+|++++++++||||+++++++.+. ...+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 456678899999999999975 346789999987655455557899999999999999999999998775 5689
Q ss_pred EEEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeec
Q 003278 587 VIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALA 666 (834)
Q Consensus 587 lv~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla 666 (834)
+||||+++++|.+++.... ..++|..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 85 lv~e~~~g~~L~~~l~~~~-----~~~~~~~~~~i~~~i~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~~~l~dfg~~ 156 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRNK-----NKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLT 156 (284)
T ss_pred EEEEccCCCCHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccchheEEEcCCCCEEECCCccc
Confidence 9999999999999986432 247899999999999999999996 69999999999999999999999999999
Q ss_pred cccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCC---------chh-HH
Q 003278 667 EFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLP---------EGL-LV 736 (834)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~---------~~~-~~ 736 (834)
+.+...... ........|+..|+|||++.+..++.++|||||||++|||+|++.|...... .+. ..
T Consensus 157 ~~~~~~~~~----~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd05079 157 KAIETDKEY----YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTV 232 (284)
T ss_pred cccccCccc----eeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccH
Confidence 865432110 0111234577889999999888999999999999999999998765422110 000 00
Q ss_pred HHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccC
Q 003278 737 KRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGN 797 (834)
Q Consensus 737 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~ 797 (834)
............ ......+ ...+.+++.+||+.+|++|||+.+|++.|+.+
T Consensus 233 ~~~~~~~~~~~~------~~~~~~~----~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 233 TRLVRVLEEGKR------LPRPPNC----PEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHHHHHHcCcc------CCCCCCC----CHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 001000000000 0011111 13466677799999999999999999998753
No 288
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.7e-36 Score=329.17 Aligned_cols=259 Identities=27% Similarity=0.393 Sum_probs=201.4
Q ss_pred cCCCCCCCeeeccCCeEEEEEEE-----CCCCeEEEEEEecccC-hhhHHHHHHHHHHHHhC-CCCceeeEeeeEEeCCE
Q 003278 110 SNGFDEDEVLGSGGFGKVYRAVL-----PSDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHL-RHRNLVRLRGWCVHEDQ 182 (834)
Q Consensus 110 t~~f~~~~~LG~G~fG~Vy~~~~-----~~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~~ 182 (834)
.++|...+.||+|+||.||+|.. ..++..||||+++... ....+.+.+|+.+++++ +||||++++++|...+.
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 35799999999999999999975 2346689999986542 33456789999999999 79999999999999999
Q ss_pred EEEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeec
Q 003278 183 LLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDF 262 (834)
Q Consensus 183 ~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 262 (834)
.++||||+++|+|.+++.... ...+++.++..++.|++.||+|||+. +|+|+||||+|||++.++.+||+||
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~~-----~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~df 185 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRKR-----ESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDF 185 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhCC-----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCC
Confidence 999999999999999986532 13489999999999999999999985 9999999999999999999999999
Q ss_pred cchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCC
Q 003278 263 GLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPD 341 (834)
Q Consensus 263 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~ 341 (834)
|+++.+...... .......+++.|+|||.+..+ .++.++|||||||++|||+| |+.|+......
T Consensus 186 g~~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslGvil~el~t~g~~p~~~~~~~ 250 (302)
T cd05055 186 GLARDIMNDSNY--------------VVKGNARLPVKWMAPESIFNC-VYTFESDVWSYGILLWEIFSLGSNPYPGMPVD 250 (302)
T ss_pred cccccccCCCce--------------eecCCCCcccccCCHhhhccC-CCCcHhHHHHHHHHHHHHHhCCCCCcCCCCch
Confidence 999754321100 001223467889999988655 57899999999999999998 99887643221
Q ss_pred ccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhc
Q 003278 342 DQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSG 407 (834)
Q Consensus 342 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~ 407 (834)
. .+.. ....+.... . ... ....+.+++..|++.+|++||++.+|++.|..
T Consensus 251 ~--~~~~----~~~~~~~~~-----~-~~~----~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~ 300 (302)
T cd05055 251 S--KFYK----LIKEGYRMA-----Q-PEH----APAEIYDIMKTCWDADPLKRPTFKQIVQLIGK 300 (302)
T ss_pred H--HHHH----HHHcCCcCC-----C-CCC----CCHHHHHHHHHHcCCCchhCcCHHHHHHHHHh
Confidence 1 1111 111111100 0 011 12468899999999999999999999998864
No 289
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=2.7e-36 Score=322.11 Aligned_cols=252 Identities=22% Similarity=0.294 Sum_probs=192.3
Q ss_pred cccccCCcEEEEEEECC-Cc--EEEEEEecCCCChhHHHHHHHHHHHHHhc-cCCCceeEEEEEeeCCeEEEEEeccCCC
Q 003278 520 RVAEMDFGTAYQGFLDN-HQ--YVLVKRLGMSKCPALRTRFSNELQNLARL-RHRNLVQLCGWCTEQGEMLVIYDYSATR 595 (834)
Q Consensus 520 ~ig~g~~g~vy~~~~~~-~~--~vavK~~~~~~~~~~~~~f~~E~~~l~~l-~HpNiv~l~g~~~~~~~~~lv~Ey~~~g 595 (834)
.||+|+||.||+|...+ +. .+++|.+.........+.|.+|++++.++ +||||++++++|...+..++||||+++|
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG 81 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence 58999999999999754 33 47888887544445556899999999999 8999999999999999999999999999
Q ss_pred chhhhhhcCCCC----------CCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeee
Q 003278 596 ILSHLLFHNNHR----------IGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFAL 665 (834)
Q Consensus 596 ~L~~~l~~~~~~----------~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGl 665 (834)
+|.+++...... .....+++..+..++.|++.||+|||+ .+++||||||+|||+++++.+|++|||+
T Consensus 82 ~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nili~~~~~~kl~dfgl 158 (270)
T cd05047 82 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGL 158 (270)
T ss_pred cHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccccceEEEcCCCeEEECCCCC
Confidence 999998653210 111247899999999999999999996 6999999999999999999999999999
Q ss_pred ccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHh
Q 003278 666 AEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEA 744 (834)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~ 744 (834)
+...... .......++..|+|||++....++.++|||||||++|||+| |..||....... ...... .
T Consensus 159 ~~~~~~~--------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~-~~~~~~---~ 226 (270)
T cd05047 159 SRGQEVY--------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-LYEKLP---Q 226 (270)
T ss_pred ccccchh--------hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHH-HHHHHh---C
Confidence 8532110 00111234667999999988889999999999999999997 988885432221 111110 0
Q ss_pred hcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccC
Q 003278 745 RKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGN 797 (834)
Q Consensus 745 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~ 797 (834)
... . ...... . ..+.+++.+||..+|.+|||+.+|+..|+.+
T Consensus 227 ~~~-----~--~~~~~~-~---~~~~~li~~~l~~~p~~Rps~~~il~~l~~~ 268 (270)
T cd05047 227 GYR-----L--EKPLNC-D---DEVYDLMRQCWREKPYERPSFAQILVSLNRM 268 (270)
T ss_pred CCC-----C--CCCCcC-C---HHHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence 000 0 011111 1 2456777799999999999999999998653
No 290
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=5.1e-36 Score=323.74 Aligned_cols=252 Identities=25% Similarity=0.391 Sum_probs=200.0
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEcc
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYM 190 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 190 (834)
++|+..+.||+|+||.||+|....++..||+|.+........+.+.+|+.++++++||||+++++++..++..++||||+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 45888899999999999999998889999999997766666788999999999999999999999999999999999999
Q ss_pred CCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhh
Q 003278 191 PNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEH 270 (834)
Q Consensus 191 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~ 270 (834)
++++|..++... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 92 ~~~~l~~~~~~~------~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 162 (292)
T cd06644 92 PGGAVDAIMLEL------DRGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVK 162 (292)
T ss_pred CCCcHHHHHHhh------cCCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceeccc
Confidence 999998887543 23589999999999999999999985 999999999999999999999999998864321
Q ss_pred hhhhhhhcccccccccccccceeeeccccCCCcccccc----CCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchH
Q 003278 271 ELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQK----GSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346 (834)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~----~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l 346 (834)
.. .......|++.|+|||++.. ...++.++|||||||++|||+||+.|+......
T Consensus 163 ~~----------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~----- 221 (292)
T cd06644 163 TL----------------QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM----- 221 (292)
T ss_pred cc----------------cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH-----
Confidence 10 01233458899999998842 234578899999999999999999998532211
Q ss_pred HHHHHHHhhcCccccccccccC-CCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHH
Q 003278 347 LDWIRRLSDEGKVLQAGDNRLS-DGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIE 403 (834)
Q Consensus 347 ~~~~~~~~~~~~~~~~~d~~l~-~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~ 403 (834)
........ .. .+.+. .... ...+.+++..||+.+|++||++.+|++
T Consensus 222 -~~~~~~~~-~~-----~~~~~~~~~~----~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 222 -RVLLKIAK-SE-----PPTLSQPSKW----SMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred -HHHHHHhc-CC-----CccCCCCccc----CHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 11111111 10 11110 0111 135778999999999999999999976
No 291
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.2e-36 Score=333.48 Aligned_cols=242 Identities=18% Similarity=0.214 Sum_probs=188.0
Q ss_pred CcccccCCcEEEEEEEC-CCcEEEEEEecCCC--ChhHHHHHHHHHHHHHhc-cCCCceeEEEEEeeCCeEEEEEeccCC
Q 003278 519 QRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSK--CPALRTRFSNELQNLARL-RHRNLVQLCGWCTEQGEMLVIYDYSAT 594 (834)
Q Consensus 519 ~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~f~~E~~~l~~l-~HpNiv~l~g~~~~~~~~~lv~Ey~~~ 594 (834)
+.||+|+||.||+|... +++.||||.+.... .....+.+..|.+++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 35899999999999865 47899999986432 223345678899999866 799999999999999999999999999
Q ss_pred CchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCC
Q 003278 595 RILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674 (834)
Q Consensus 595 g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~ 674 (834)
|+|..++.... .+++.....++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||++.......
T Consensus 81 ~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~- 150 (321)
T cd05591 81 GDLMFQIQRSR------KFDEPRSRFYAAEVTLALMFLHR---HGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG- 150 (321)
T ss_pred CcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeecccceecccCC-
Confidence 99998886432 37888888999999999999997 689999999999999999999999999987532211
Q ss_pred CCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCccccccc
Q 003278 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVD 754 (834)
Q Consensus 675 ~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 754 (834)
.......||+.|||||++.+..++.++|||||||++|||+||+.||....+... ...+. .... .
T Consensus 151 ------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~-~~~i~---~~~~-----~- 214 (321)
T cd05591 151 ------VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDL-FESIL---HDDV-----L- 214 (321)
T ss_pred ------ccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHH-HHHHH---cCCC-----C-
Confidence 112346799999999999998999999999999999999999999975433221 11111 1100 0
Q ss_pred cccCCCCCHHHHHHHHHHHHHhccCCCCCCC-------ChhHHHH
Q 003278 755 LSLNGEYNHKELMRLIKLGIACTLSNPELRP-------SMRQILS 792 (834)
Q Consensus 755 ~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RP-------tm~~v~~ 792 (834)
.+. ....+ +..+...|++.||++|| ++.++++
T Consensus 215 --~p~-~~~~~---~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 215 --YPV-WLSKE---AVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred --CCC-CCCHH---HHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 011 11233 44555689999999999 6666663
No 292
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=2.8e-36 Score=319.28 Aligned_cols=251 Identities=19% Similarity=0.314 Sum_probs=194.3
Q ss_pred CcccccCCcEEEEEEECC----CcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEeccCC
Q 003278 519 QRVAEMDFGTAYQGFLDN----HQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSAT 594 (834)
Q Consensus 519 ~~ig~g~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~~ 594 (834)
++||+|+||.||+|.... +..+|+|.+.........++|.+|++++++++|||||++++++.. +..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG-EPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC-CceEEEEEeCCC
Confidence 368999999999997532 257999998766554455789999999999999999999998864 467999999999
Q ss_pred CchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCC
Q 003278 595 RILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674 (834)
Q Consensus 595 g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~ 674 (834)
|+|.+++.... .++|..+..++.|++.||+|||+ .+++||||||+|||++.++.+||+|||+++.......
T Consensus 80 ~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~ 150 (257)
T cd05060 80 GPLLKYLKKRR------EIPVSDLKELAHQVAMGMAYLES---KHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSD 150 (257)
T ss_pred CcHHHHHHhCC------CCCHHHHHHHHHHHHHHHHHHhh---cCeeccCcccceEEEcCCCcEEeccccccceeecCCc
Confidence 99999987542 47899999999999999999996 6899999999999999999999999999986543221
Q ss_pred CCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcCcccccc
Q 003278 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRPLAELV 753 (834)
Q Consensus 675 ~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (834)
.. .......++..|+|||.+.+..++.++|||||||++|||+| |..|+....+. .+...+. .. ...
T Consensus 151 ~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~-~~~~~~~---~~-~~~---- 217 (257)
T cd05060 151 YY----RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA-EVIAMLE---SG-ERL---- 217 (257)
T ss_pred cc----ccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH-HHHHHHH---cC-CcC----
Confidence 11 11112235678999999999999999999999999999998 88888644322 1212111 11 110
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccCC
Q 003278 754 DLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGND 798 (834)
Q Consensus 754 d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~~ 798 (834)
...... +. .+.+++.+||..+|++|||+.+|++.|+++.
T Consensus 218 --~~~~~~-~~---~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 218 --PRPEEC-PQ---EIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred --CCCCCC-CH---HHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 011111 12 4556777999999999999999999998753
No 293
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.4e-36 Score=348.23 Aligned_cols=252 Identities=20% Similarity=0.230 Sum_probs=194.2
Q ss_pred cCcCCcccccCCcEEEEEEEC-C-CcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEecc
Q 003278 515 FSESQRVAEMDFGTAYQGFLD-N-HQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYS 592 (834)
Q Consensus 515 f~~~~~ig~g~~g~vy~~~~~-~-~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~ 592 (834)
|...+.||.|+||.||+|... + +..||+|.+.... ......+.+|+.+|++++|||||++++++...+..+|||||+
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND-ERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 555678999999999999853 3 5678888765433 333456788999999999999999999999999999999999
Q ss_pred CCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccC
Q 003278 593 ATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRN 672 (834)
Q Consensus 593 ~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~ 672 (834)
++|+|.+++..... ....+++.....++.|++.||.|||+ .+|+||||||+||||+.++.+||+|||+++.+...
T Consensus 148 ~gg~L~~~l~~~~~--~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~ 222 (478)
T PTZ00267 148 SGGDLNKQIKQRLK--EHLPFQEYEVGLLFYQIVLALDEVHS---RKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDS 222 (478)
T ss_pred CCCCHHHHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCcCHHhEEECCCCcEEEEeCcCceecCCc
Confidence 99999988864321 12357888888999999999999996 69999999999999999999999999999865432
Q ss_pred CCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCccccc
Q 003278 673 DHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAEL 752 (834)
Q Consensus 673 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (834)
.. .....+.+||++|||||++.+..++.++|||||||++|||+||+.|+....... ...... ....
T Consensus 223 ~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~-~~~~~~---~~~~----- 288 (478)
T PTZ00267 223 VS-----LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE-IMQQVL---YGKY----- 288 (478)
T ss_pred cc-----cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHH---hCCC-----
Confidence 11 111235679999999999999999999999999999999999999986432211 111111 1100
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 753 VDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 753 ~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
++ .....+ . .+.+++.+||+.||++|||+.+++.
T Consensus 289 -~~-~~~~~s-~---~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 289 -DP-FPCPVS-S---GMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred -CC-CCccCC-H---HHHHHHHHHhccChhhCcCHHHHHh
Confidence 00 111111 2 3555666899999999999999864
No 294
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=8.5e-37 Score=340.66 Aligned_cols=209 Identities=19% Similarity=0.202 Sum_probs=173.3
Q ss_pred hCcCcCCcccccCCcEEEEEEEC-CCcEEEEEEecCCC--ChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSK--CPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIY 589 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~ 589 (834)
++|...+.||+|+||.||+|... +++.||||++.... .......+.+|+.+|..++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 36777889999999999999964 58899999986432 1233456889999999999999999999999999999999
Q ss_pred eccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccc
Q 003278 590 DYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFL 669 (834)
Q Consensus 590 Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~ 669 (834)
||+++|+|.+++...+ .+++.....++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.+
T Consensus 81 E~~~~g~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 151 (364)
T cd05599 81 EYLPGGDMMTLLMKKD------TFTEEETRFYIAETILAIDSIHK---LGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGL 151 (364)
T ss_pred CCCCCcHHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEeecccceec
Confidence 9999999999986532 37888888999999999999997 68999999999999999999999999998764
Q ss_pred ccCCCCCcc--c-----------------------------ccCccccccccCccchhccccCCCCccCcchhhHHHHHH
Q 003278 670 TRNDHGHRK--A-----------------------------TSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLE 718 (834)
Q Consensus 670 ~~~~~~~~~--~-----------------------------~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E 718 (834)
......... . .....+.+||+.|||||++....++.++|||||||++||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~e 231 (364)
T cd05599 152 KKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYE 231 (364)
T ss_pred cccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHH
Confidence 322100000 0 000113579999999999999999999999999999999
Q ss_pred HHhCCCccCCCC
Q 003278 719 VVTGQMAVDFRL 730 (834)
Q Consensus 719 ~~tG~~p~~~~~ 730 (834)
|+||..||....
T Consensus 232 l~~G~~Pf~~~~ 243 (364)
T cd05599 232 MLVGYPPFCSDN 243 (364)
T ss_pred hhcCCCCCCCCC
Confidence 999999997543
No 295
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=4.3e-36 Score=319.19 Aligned_cols=262 Identities=20% Similarity=0.320 Sum_probs=203.6
Q ss_pred hCcCcCCcccccCCcEEEEEEEC-CCcEEEEEEecCCC--ChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSK--CPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIY 589 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~ 589 (834)
++|...+.||+|+||.||+|... +++.||+|.++... .....+.+.+|++++++++|+||+++++++.+.+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 56777888999999999999976 78899999886422 2334578999999999999999999999999999999999
Q ss_pred eccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccc
Q 003278 590 DYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFL 669 (834)
Q Consensus 590 Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~ 669 (834)
||+++|+|..++..... ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.++++|||++..+
T Consensus 82 e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~ 156 (267)
T cd08224 82 ELADAGDLSRMIKHFKK--QKRLIPERTIWKYFVQLCSALEHMHS---KRIMHRDIKPANVFITATGVVKLGDLGLGRFF 156 (267)
T ss_pred ecCCCCCHHHHHHHhcc--cCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecCCcChhhEEECCCCcEEEeccceeeec
Confidence 99999999998865322 12347899999999999999999996 69999999999999999999999999998765
Q ss_pred ccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCcc
Q 003278 670 TRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPL 749 (834)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 749 (834)
.... .......|+..|+|||++.+..++.++|||||||++|||+||+.|+...... .......... ...
T Consensus 157 ~~~~-------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~--~~~ 225 (267)
T cd08224 157 SSKT-------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN--LYSLCKKIEK--CDY 225 (267)
T ss_pred cCCC-------cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCcc--HHHHHhhhhc--CCC
Confidence 3321 1122346889999999999888999999999999999999999998533211 1111111110 000
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccCC
Q 003278 750 AELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGND 798 (834)
Q Consensus 750 ~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~~ 798 (834)
. ..... .....+.+++.+||..+|++|||+.+|+++|+.+.
T Consensus 226 ~-----~~~~~---~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 226 P-----PLPAD---HYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred C-----CCChh---hcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 0 01110 11123556667899999999999999999997653
No 296
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=3.1e-36 Score=321.10 Aligned_cols=259 Identities=19% Similarity=0.264 Sum_probs=196.9
Q ss_pred HHHHHhhCcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeE
Q 003278 507 EIISATNNFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEM 585 (834)
Q Consensus 507 el~~at~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~ 585 (834)
|++.+++++.....||+|+||.||+|.. +++..|++|.+...... ..+.|.+|+.++++++||||++++|++...+..
T Consensus 2 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 80 (268)
T cd06624 2 EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSR-YVQPLHEEIALHSYLKHRNIVQYLGSDSENGFF 80 (268)
T ss_pred CcccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHH-HHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEE
Confidence 3566788998889999999999999985 45778999988654332 346789999999999999999999999999999
Q ss_pred EEEEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecC-CCCceEeeee
Q 003278 586 LVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDP-DMNPRLGSFA 664 (834)
Q Consensus 586 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~-~~~~ki~DfG 664 (834)
++|+||+++++|..++...... ...++..+..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~~~~qi~~al~~lH~---~~i~h~dl~p~nil~~~~~~~~~l~dfg 154 (268)
T cd06624 81 KIFMEQVPGGSLSALLRSKWGP---LKDNEQTIIFYTKQILEGLKYLHD---NQIVHRDIKGDNVLVNTYSGVVKISDFG 154 (268)
T ss_pred EEEEecCCCCCHHHHHHHhccc---CCCcHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCeEEEecch
Confidence 9999999999999998753211 112677788899999999999996 69999999999999986 6789999999
Q ss_pred eccccccCCCCCcccccCccccccccCccchhccccCC--CCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHH
Q 003278 665 LAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGE--ATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEF 742 (834)
Q Consensus 665 la~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~--~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~ 742 (834)
++..+.... .......|+..|+|||++.++. ++.++|||||||++|||+||+.|+............. ..
T Consensus 155 ~~~~~~~~~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~-~~ 226 (268)
T cd06624 155 TSKRLAGIN-------PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKV-GM 226 (268)
T ss_pred hheecccCC-------CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhh-hh
Confidence 987543221 1122346889999999987654 7889999999999999999999985322111111000 00
Q ss_pred HhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 743 EARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 743 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
... .+.+.... .+ .+..++.+||+.+|.+||||.+|+.
T Consensus 227 -~~~-------~~~~~~~~-~~---~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 227 -FKI-------HPEIPESL-SA---EAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred -hcc-------CCCCCccc-CH---HHHHHHHHHcCCCchhCCCHHHHHh
Confidence 000 01111111 12 3455667999999999999999875
No 297
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.4e-36 Score=333.21 Aligned_cols=243 Identities=23% Similarity=0.285 Sum_probs=190.8
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc---ChhhHHHHHHHHHHHHhCC-CCceeeEeeeEEeCCEEEEEE
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK---GERFEKTFAAELVAVAHLR-HRNLVRLRGWCVHEDQLLLVY 187 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~-H~nIv~l~g~~~~~~~~~lV~ 187 (834)
+|+..+.||+|+||.||+|..+.+|+.||||++... .....+.+..|..++..+. |++|+++++++...+.+|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 477789999999999999999889999999998653 1233456778888888876 577888999999999999999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhh
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARW 267 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 267 (834)
||+++|+|..++... ..+++.++..|+.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 81 Ey~~~g~L~~~i~~~-------~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~ 150 (323)
T cd05615 81 EYVNGGDLMYHIQQV-------GKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 150 (323)
T ss_pred cCCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccc
Confidence 999999999988543 4589999999999999999999985 999999999999999999999999999874
Q ss_pred hhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHH
Q 003278 268 LEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347 (834)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~ 347 (834)
..... .......||+.|+|||++... .++.++|||||||++|||+||+.||..... ..+.
T Consensus 151 ~~~~~----------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~elltG~~pf~~~~~---~~~~ 210 (323)
T cd05615 151 HMVDG----------------VTTRTFCGTPDYIAPEIIAYQ-PYGKSVDWWAYGVLLYEMLAGQPPFDGEDE---DELF 210 (323)
T ss_pred cCCCC----------------ccccCccCCccccCHHHHcCC-CCCCccchhhhHHHHHHHHhCCCCCCCCCH---HHHH
Confidence 21110 012345699999999988654 678999999999999999999999864321 1111
Q ss_pred HHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchh
Q 003278 348 DWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMK 399 (834)
Q Consensus 348 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~ 399 (834)
. .+.. ... ... ... ...+.++...|++.+|.+|++..
T Consensus 211 ~---~i~~-~~~------~~p-~~~----~~~~~~li~~~l~~~p~~R~~~~ 247 (323)
T cd05615 211 Q---SIME-HNV------SYP-KSL----SKEAVSICKGLMTKHPSKRLGCG 247 (323)
T ss_pred H---HHHh-CCC------CCC-ccC----CHHHHHHHHHHcccCHhhCCCCC
Confidence 1 1111 110 010 111 13567899999999999999864
No 298
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.8e-36 Score=340.06 Aligned_cols=192 Identities=23% Similarity=0.253 Sum_probs=163.9
Q ss_pred hCcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEec
Q 003278 513 NNFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY 591 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey 591 (834)
++|...+.||+|+||.||++.. .+++.||+|... +..+.+|+++|++++|||||++++++......++|+||
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh-------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 4688889999999999999985 457889999643 24577899999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccccc
Q 003278 592 SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTR 671 (834)
Q Consensus 592 ~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~ 671 (834)
+. ++|..++.... .+++...+.|+.|++.||+|||+ .+||||||||+|||++.++.+||+|||+|+....
T Consensus 165 ~~-~~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~ylH~---~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~ 234 (391)
T PHA03212 165 YK-TDLYCYLAAKR------NIAICDILAIERSVLRAIQYLHE---NRIIHRDIKAENIFINHPGDVCLGDFGAACFPVD 234 (391)
T ss_pred CC-CCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHhEEEcCCCCEEEEeCCccccccc
Confidence 86 67777765432 37888899999999999999997 6999999999999999999999999999975322
Q ss_pred CCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccC
Q 003278 672 NDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVD 727 (834)
Q Consensus 672 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~ 727 (834)
.. ........||+.|+|||++.+..++.++|||||||++|||+||+.|+.
T Consensus 235 ~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~ 284 (391)
T PHA03212 235 IN------ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLF 284 (391)
T ss_pred cc------ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcC
Confidence 11 111234679999999999999999999999999999999999998764
No 299
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.1e-36 Score=324.36 Aligned_cols=254 Identities=22% Similarity=0.367 Sum_probs=199.3
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEcc
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYM 190 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 190 (834)
++|...+.||+|+||.||+|....+++.||+|.++.........+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 46777889999999999999998899999999987654444566889999999999999999999999999999999999
Q ss_pred CCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhh
Q 003278 191 PNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEH 270 (834)
Q Consensus 191 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~ 270 (834)
++++|.+++... ..+++.+...++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++..+..
T Consensus 89 ~~~~L~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06645 89 GGGSLQDIYHVT-------GPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITA 158 (267)
T ss_pred CCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccC
Confidence 999999988543 3588999999999999999999986 999999999999999999999999999865421
Q ss_pred hhhhhhhcccccccccccccceeeeccccCCCccccc--cCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHH
Q 003278 271 ELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQ--KGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLD 348 (834)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~--~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~ 348 (834)
.. .......||+.|+|||++. ....++.++|||||||++|||++|+.|+....+....
T Consensus 159 ~~----------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~---- 218 (267)
T cd06645 159 TI----------------AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL---- 218 (267)
T ss_pred cc----------------cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhH----
Confidence 10 0123346899999999874 2335688999999999999999999997543221110
Q ss_pred HHHHHhhcCccccccccccCC-CCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 349 WIRRLSDEGKVLQAGDNRLSD-GSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 349 ~~~~~~~~~~~~~~~d~~l~~-~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
..... .... .+.... ..+ ...+.+++..|++.+|++||++.+|++.
T Consensus 219 --~~~~~-~~~~---~~~~~~~~~~----~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 219 --FLMTK-SNFQ---PPKLKDKMKW----SNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred --Hhhhc-cCCC---CCcccccCCC----CHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 00000 1100 011110 011 1357789999999999999999998763
No 300
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=3e-36 Score=328.24 Aligned_cols=199 Identities=20% Similarity=0.294 Sum_probs=172.6
Q ss_pred hCcCcCCcccccCCcEEEEEEEC-CCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEec
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY 591 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey 591 (834)
++|...+.||+|+||.||++... ++..+|+|.+..........++.+|++++.+++||||++++++|.+.+..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 36778889999999999999854 57788999887654555567799999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccccc
Q 003278 592 SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTR 671 (834)
Q Consensus 592 ~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~ 671 (834)
+++++|.+++.... .+++.....++.|+++||+|||+. .+++||||||+|||+++++.+||+|||++..+..
T Consensus 81 ~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 152 (308)
T cd06615 81 MDGGSLDQVLKKAG------RIPENILGKISIAVLRGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 152 (308)
T ss_pred cCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhh--CCEEECCCChHHEEEecCCcEEEccCCCcccccc
Confidence 99999999986532 377888889999999999999962 4899999999999999999999999999865422
Q ss_pred CCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCC
Q 003278 672 NDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDF 728 (834)
Q Consensus 672 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~ 728 (834)
. ......|+..|+|||++.+..++.++|||||||++|||+||+.|+..
T Consensus 153 ~---------~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~ 200 (308)
T cd06615 153 S---------MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPP 200 (308)
T ss_pred c---------ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence 1 12245789999999999888899999999999999999999999854
No 301
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.6e-36 Score=328.09 Aligned_cols=262 Identities=21% Similarity=0.294 Sum_probs=199.5
Q ss_pred hCcCcCCcccccCCcEEEEEEEC--------CCcEEEEEEecCCCChhHHHHHHHHHHHHHhc-cCCCceeEEEEEeeCC
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLD--------NHQYVLVKRLGMSKCPALRTRFSNELQNLARL-RHRNLVQLCGWCTEQG 583 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~--------~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l-~HpNiv~l~g~~~~~~ 583 (834)
++|...+.||+|+||.||+|... ++..||+|.+.........+.+.+|+.++..+ +||||+++++++....
T Consensus 15 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 94 (304)
T cd05101 15 DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 94 (304)
T ss_pred HHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCC
Confidence 45667788999999999999741 23479999887544444456789999999999 8999999999999999
Q ss_pred eEEEEEeccCCCchhhhhhcCCCC----------CCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeec
Q 003278 584 EMLVIYDYSATRILSHLLFHNNHR----------IGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLD 653 (834)
Q Consensus 584 ~~~lv~Ey~~~g~L~~~l~~~~~~----------~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld 653 (834)
..++||||+++|+|.+++...... .....++|..++.++.|++.||+|||+ .+|+||||||+|||++
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~Nili~ 171 (304)
T cd05101 95 PLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS---QKCIHRDLAARNVLVT 171 (304)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH---CCeeecccccceEEEc
Confidence 999999999999999998764221 012357889999999999999999996 6999999999999999
Q ss_pred CCCCceEeeeeeccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCc
Q 003278 654 PDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPE 732 (834)
Q Consensus 654 ~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~ 732 (834)
+++.+||+|||+++.+...... .......+++.|+|||++.+..++.++|||||||++|||+| |..|+... +.
T Consensus 172 ~~~~~kl~D~g~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~-~~ 245 (304)
T cd05101 172 ENNVMKIADFGLARDVNNIDYY-----KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PV 245 (304)
T ss_pred CCCcEEECCCccceeccccccc-----ccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC-CH
Confidence 9999999999999765332110 11122346778999999998899999999999999999999 66776433 22
Q ss_pred hhHHHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccC
Q 003278 733 GLLVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGN 797 (834)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~ 797 (834)
..+..... ..... ... ..... .+..++.+||..+|++||||.+|++.|+.+
T Consensus 246 ~~~~~~~~---~~~~~-------~~~-~~~~~---~~~~li~~cl~~~p~~Rps~~e~l~~l~~~ 296 (304)
T cd05101 246 EELFKLLK---EGHRM-------DKP-ANCTN---ELYMMMRDCWHAIPSHRPTFKQLVEDLDRI 296 (304)
T ss_pred HHHHHHHH---cCCcC-------CCC-CCCCH---HHHHHHHHHcccChhhCCCHHHHHHHHHHH
Confidence 22222111 11110 000 11123 355566699999999999999999999654
No 302
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.5e-36 Score=327.23 Aligned_cols=263 Identities=29% Similarity=0.446 Sum_probs=202.5
Q ss_pred hcCCCCCCCeeeccCCeEEEEEEEC-----CCCeEEEEEEecccC-hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCE
Q 003278 109 GSNGFDEDEVLGSGGFGKVYRAVLP-----SDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQ 182 (834)
Q Consensus 109 ~t~~f~~~~~LG~G~fG~Vy~~~~~-----~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~ 182 (834)
..++|+..+.||+|+||.||+|... .++..||+|.+.... ....+.|.+|+.++++++||||++++++|...+.
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~ 82 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKP 82 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCc
Confidence 4577999999999999999999874 257899999986543 3445679999999999999999999999999999
Q ss_pred EEEEEEccCCCCHhHHHhcCCCcc---------------ccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCC
Q 003278 183 LLLVYDYMPNRSLDRVLFRRPENL---------------EAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTS 247 (834)
Q Consensus 183 ~~lV~Ey~~~gsL~~~l~~~~~~~---------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~ 247 (834)
.++||||+++|+|.+++....... .....+++..++.++.|++.||.|||+. +++||||||+
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~ 159 (288)
T cd05050 83 MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATR 159 (288)
T ss_pred cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHh
Confidence 999999999999999997532110 1123588999999999999999999985 9999999999
Q ss_pred ceEECCCCceEEeeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHH
Q 003278 248 NVMLDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLE 327 (834)
Q Consensus 248 NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~E 327 (834)
|||++.++.+||+|||+++.+...... .......+++.|+|||.+... .++.++|||||||++||
T Consensus 160 nil~~~~~~~~l~dfg~~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~e 224 (288)
T cd05050 160 NCLVGENMVVKIADFGLSRNIYSADYY--------------KASENDAIPIRWMPPESIFYN-RYTTESDVWAYGVVLWE 224 (288)
T ss_pred heEecCCCceEECccccceecccCccc--------------cccCCCccChhhcCHHHHhcC-CCCchhHHHHHHHHHHH
Confidence 999999999999999998754221100 001122346789999988654 67999999999999999
Q ss_pred HHh-CCccCCCCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhh
Q 003278 328 VVS-GRRAVDLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVS 406 (834)
Q Consensus 328 llt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~ 406 (834)
|++ |..|+..... ..+.... ..+...... .. ....+.+++.+||+.+|.+||++.|+++.|+
T Consensus 225 l~~~~~~p~~~~~~------~~~~~~~-~~~~~~~~~------~~----~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 225 IFSYGMQPYYGMAH------EEVIYYV-RDGNVLSCP------DN----CPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred HHhCCCCCCCCCCH------HHHHHHH-hcCCCCCCC------CC----CCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 998 8777743211 1222221 122221111 11 1246888999999999999999999999875
No 303
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=9.5e-37 Score=322.79 Aligned_cols=250 Identities=27% Similarity=0.407 Sum_probs=195.8
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEccC
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMP 191 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 191 (834)
+|+..+.||+|+||.||+|.+. ++..+|+|.+.... .....|.+|+.++++++||||+++++++...+..++||||++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA 82 (256)
T ss_pred HcchhhhhccCCCceEEEeEec-CCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence 4778899999999999999984 56789999886432 234568899999999999999999999999999999999999
Q ss_pred CCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhh
Q 003278 192 NRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHE 271 (834)
Q Consensus 192 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 271 (834)
+++|.+++.... ..++|..+..|+.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 83 ~~~L~~~l~~~~------~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~ 153 (256)
T cd05059 83 NGCLLNYLRERK------GKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDD 153 (256)
T ss_pred CCCHHHHHHhcc------cCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceecccc
Confidence 999999986532 3589999999999999999999985 8999999999999999999999999998754321
Q ss_pred hhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCccchHHHHH
Q 003278 272 LQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQIILLDWI 350 (834)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~~l~~~~ 350 (834)
.. .......++..|+|||.+... .++.++|||||||++|||+| |+.|+...... ....
T Consensus 154 ~~---------------~~~~~~~~~~~y~~Pe~~~~~-~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~~-- 212 (256)
T cd05059 154 QY---------------TSSQGTKFPVKWAPPEVFDYS-RFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS---EVVE-- 212 (256)
T ss_pred cc---------------cccCCCCCCccccCHHHhccC-CCCchhhHHHHHHHHHHHhccCCCCCCCCCHH---HHHH--
Confidence 00 001111245689999988654 57889999999999999999 78887643211 1111
Q ss_pred HHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHh
Q 003278 351 RRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAV 405 (834)
Q Consensus 351 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l 405 (834)
.. ..+... ... . .....+.+++..||+.+|++||+|.++++.|
T Consensus 213 -~~-~~~~~~-----~~~-~----~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 213 -SV-SAGYRL-----YRP-K----LAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred -HH-HcCCcC-----CCC-C----CCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 11 111100 000 1 1234688999999999999999999999876
No 304
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=3.5e-36 Score=323.61 Aligned_cols=264 Identities=25% Similarity=0.425 Sum_probs=200.7
Q ss_pred CCCCCCCeeeccCCeEEEEEEE----CCCCeEEEEEEecccC-hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeC--CEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVL----PSDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHE--DQL 183 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~----~~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~--~~~ 183 (834)
..|...+.||+|+||.||++.+ ..++..||+|.+.... ....+.|.+|+.++++++||||+++++++... +..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 3477889999999999999975 3568899999986542 34456799999999999999999999999875 568
Q ss_pred EEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeecc
Q 003278 184 LLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFG 263 (834)
Q Consensus 184 ~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 263 (834)
++||||+++++|.+++... ...++|..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 84 ~lv~e~~~g~~L~~~l~~~------~~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg 154 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRN------KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFG 154 (284)
T ss_pred EEEEEccCCCCHHHHHHhc------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCc
Confidence 9999999999999998543 13589999999999999999999985 99999999999999999999999999
Q ss_pred chhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCC--
Q 003278 264 LARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPD-- 341 (834)
Q Consensus 264 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~-- 341 (834)
+++.+...... ........|+..|+|||++..+ .++.++|||||||++|||+|++.|...+...
T Consensus 155 ~~~~~~~~~~~-------------~~~~~~~~~~~~y~apE~~~~~-~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~ 220 (284)
T cd05079 155 LTKAIETDKEY-------------YTVKDDLDSPVFWYAPECLIQS-KFYIASDVWSFGVTLYELLTYCDSESSPMTLFL 220 (284)
T ss_pred cccccccCccc-------------eeecCCCCCCccccCHHHhccC-CCCccccchhhhhhhhhhhcCCCCCccccchhh
Confidence 99865322100 0011234577889999988654 5788999999999999999988764322110
Q ss_pred -------ccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcC
Q 003278 342 -------DQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGS 408 (834)
Q Consensus 342 -------~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~ 408 (834)
.+.....++ .....+...... .. ....+.+++..|++.+|++||++.++++.++..
T Consensus 221 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------~~----~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 221 KMIGPTHGQMTVTRLV-RVLEEGKRLPRP------PN----CPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred hhcccccccccHHHHH-HHHHcCccCCCC------CC----CCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 111111111 111222111100 11 134688999999999999999999999988753
No 305
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=4.7e-36 Score=321.83 Aligned_cols=249 Identities=15% Similarity=0.238 Sum_probs=193.2
Q ss_pred CcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEecc
Q 003278 514 NFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYS 592 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~ 592 (834)
+|...+.||+|+||.||+|.. .+++.||+|.+..........+|.+|+.++++++||||+++++++...+..++||||+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 455667899999999999985 5678899999876544555577999999999999999999999999999999999999
Q ss_pred CCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccC
Q 003278 593 ATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRN 672 (834)
Q Consensus 593 ~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~ 672 (834)
++++|..+. .+++.....++.|++.||+|||+ .+|+|+||||+|||++.++.+||+|||++..+...
T Consensus 82 ~~~~l~~~~----------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~ 148 (279)
T cd06619 82 DGGSLDVYR----------KIPEHVLGRIAVAVVKGLTYLWS---LKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS 148 (279)
T ss_pred CCCChHHhh----------cCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc
Confidence 999996542 25677788999999999999996 69999999999999999999999999999754321
Q ss_pred CCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHH--HHHHHHHhhcCccc
Q 003278 673 DHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLV--KRVHEFEARKRPLA 750 (834)
Q Consensus 673 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~--~~~~~~~~~~~~~~ 750 (834)
......||..|+|||++.+..++.++|||||||++|||+||+.|+.......... ...........
T Consensus 149 ---------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--- 216 (279)
T cd06619 149 ---------IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED--- 216 (279)
T ss_pred ---------cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccC---
Confidence 1223578999999999998899999999999999999999999986432211100 00001100000
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 003278 751 ELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSI 793 (834)
Q Consensus 751 ~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~ 793 (834)
.+.+....... .+.+++.+||+.+|++||++.+|++.
T Consensus 217 ---~~~~~~~~~~~---~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 217 ---PPVLPVGQFSE---KFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred ---CCCCCCCcCCH---HHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 01111111112 34566679999999999999999864
No 306
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=2.2e-36 Score=325.50 Aligned_cols=251 Identities=24% Similarity=0.339 Sum_probs=195.8
Q ss_pred CCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC---hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEc
Q 003278 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDY 189 (834)
Q Consensus 113 f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 189 (834)
|+..+.||+|+||.||+|....+++.||||.+.... ....+.+.+|+.++++++|+||+.+++.+.+.+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 667789999999999999999999999999886432 22335678899999999999999999999999999999999
Q ss_pred cCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhh
Q 003278 190 MPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLE 269 (834)
Q Consensus 190 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~ 269 (834)
+++|+|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+|||+++++.++|+|||++....
T Consensus 82 ~~g~~L~~~l~~~~-----~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 153 (285)
T cd05630 82 MNGGDLKFHIYHMG-----EAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVP 153 (285)
T ss_pred cCCCcHHHHHHHhc-----ccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecC
Confidence 99999999886432 23588999999999999999999985 99999999999999999999999999986432
Q ss_pred hhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHH
Q 003278 270 HELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDW 349 (834)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~ 349 (834)
... ......||+.|+|||.+... .++.++|||||||++|||++|+.||........ . .-
T Consensus 154 ~~~-----------------~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~--~-~~ 212 (285)
T cd05630 154 EGQ-----------------TIKGRVGTVGYMAPEVVKNE-RYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK--R-EE 212 (285)
T ss_pred CCc-----------------cccCCCCCccccChHHHcCC-CCCCccccHHHHHHHHHHHhCCCCCCCCCccch--H-HH
Confidence 110 01223589999999998655 578999999999999999999999975322111 0 00
Q ss_pred HHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCc-----hhhHHH
Q 003278 350 IRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPS-----MKWVIE 403 (834)
Q Consensus 350 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs-----m~~V~~ 403 (834)
........ .. ... ..+. ..+.+++..||+.||.+||+ +.++++
T Consensus 213 ~~~~~~~~--~~----~~~-~~~~----~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 213 VERLVKEV--QE----EYS-EKFS----PDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred HHhhhhhh--hh----hcC-ccCC----HHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 11111100 00 010 1111 34678999999999999999 666664
No 307
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1.4e-36 Score=327.81 Aligned_cols=267 Identities=25% Similarity=0.344 Sum_probs=205.9
Q ss_pred cccHHHHHhhcCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhC-CCCceeeEeeeEE
Q 003278 100 IFSYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHL-RHRNLVRLRGWCV 178 (834)
Q Consensus 100 ~f~~~el~~~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~ 178 (834)
.|+..++..++++|+..+.||+|+||.||+|....+++.+|+|.+.... .....+.+|+.++.++ +||||++++++|.
T Consensus 11 ~~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~ 89 (291)
T cd06639 11 MLGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFY 89 (291)
T ss_pred hhhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEE
Confidence 4566777778999999999999999999999998899999999986532 2345678899999998 8999999999987
Q ss_pred eCC-----EEEEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECC
Q 003278 179 HED-----QLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDS 253 (834)
Q Consensus 179 ~~~-----~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~ 253 (834)
..+ ..++||||+++|+|.+++..... ....++|..+..++.|++.||.|||+. +|+||||||+||+++.
T Consensus 90 ~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~ 163 (291)
T cd06639 90 KADKLVGGQLWLVLELCNGGSVTELVKGLLI---CGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTT 163 (291)
T ss_pred eccccCCCeeEEEEEECCCCcHHHHHHHhhh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcC
Confidence 643 58999999999999998864321 234689999999999999999999985 9999999999999999
Q ss_pred CCceEEeeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCC----CCCcccceeehhhHHHHHH
Q 003278 254 QYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGS----VATAKSDVFSFGIVVLEVV 329 (834)
Q Consensus 254 ~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~----~~~~ksDV~SfGvvl~Ell 329 (834)
++.+||+|||+++.+..... ......|+..|+|||.+..+. .++.++|||||||++|||+
T Consensus 164 ~~~~kl~dfg~~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~ 227 (291)
T cd06639 164 EGGVKLVDFGVSAQLTSTRL----------------RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELG 227 (291)
T ss_pred CCCEEEeecccchhcccccc----------------cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHh
Confidence 99999999999875432100 012235889999999875432 2578999999999999999
Q ss_pred hCCccCCCCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 330 SGRRAVDLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 330 tG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
||+.|+...... ..+..+ . .+......++ . .....+.+++..||+.+|++||++.++++.
T Consensus 228 ~g~~p~~~~~~~--~~~~~~----~-~~~~~~~~~~----~----~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 228 DGDPPLFDMHPV--KTLFKI----P-RNPPPTLLHP----E----KWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred hCCCCCCCCcHH--HHHHHH----h-cCCCCCCCcc----c----ccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 999998643211 111111 0 1111111110 0 112357889999999999999999999863
No 308
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.9e-36 Score=326.53 Aligned_cols=263 Identities=21% Similarity=0.308 Sum_probs=200.2
Q ss_pred HhhCcCcCCcccccCCcEEEEEEECC------CcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCe
Q 003278 511 ATNNFSESQRVAEMDFGTAYQGFLDN------HQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGE 584 (834)
Q Consensus 511 at~~f~~~~~ig~g~~g~vy~~~~~~------~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~ 584 (834)
.+++|...+.||+|+||.||+|...+ +..||+|.+...........|.+|+.++++++||||+++++++.+...
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 34677888899999999999997542 447999988755444445678899999999999999999999999999
Q ss_pred EEEEEeccCCCchhhhhhcCCC----CCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceE
Q 003278 585 MLVIYDYSATRILSHLLFHNNH----RIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRL 660 (834)
Q Consensus 585 ~~lv~Ey~~~g~L~~~l~~~~~----~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki 660 (834)
.++||||+++|+|.+++..... ..+...+++.....++.|++.||+|||+ ++|+||||||+|||+++++.+|+
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCCChheEEEcCCCcEEE
Confidence 9999999999999999975321 1122346777888999999999999996 69999999999999999999999
Q ss_pred eeeeeccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHH
Q 003278 661 GSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRV 739 (834)
Q Consensus 661 ~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~ 739 (834)
+|||+++.+...... .......++..|+|||++.++.++.++|||||||++|||++ |..|+....... .....
T Consensus 161 ~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~-~~~~~ 234 (288)
T cd05061 161 GDFGMTRDIYETDYY-----RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ-VLKFV 234 (288)
T ss_pred CcCCccccccccccc-----cccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHH
Confidence 999999765332210 01112345778999999999999999999999999999999 677775332221 11111
Q ss_pred HHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHcc
Q 003278 740 HEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDG 796 (834)
Q Consensus 740 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~ 796 (834)
.. .... ..... .+ ..+.+++.+||+.+|++|||+.++++.|..
T Consensus 235 ~~-----~~~~-----~~~~~-~~---~~~~~li~~~l~~~p~~Rps~~~ll~~l~~ 277 (288)
T cd05061 235 MD-----GGYL-----DQPDN-CP---ERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 277 (288)
T ss_pred Hc-----CCCC-----CCCCC-CC---HHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 10 0000 00111 11 245666779999999999999999998865
No 309
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2.3e-36 Score=330.43 Aligned_cols=239 Identities=17% Similarity=0.203 Sum_probs=183.4
Q ss_pred cccccCCcEEEEEEEC-CCcEEEEEEecCCC--ChhHHHHHHHHHHHHHh-ccCCCceeEEEEEeeCCeEEEEEeccCCC
Q 003278 520 RVAEMDFGTAYQGFLD-NHQYVLVKRLGMSK--CPALRTRFSNELQNLAR-LRHRNLVQLCGWCTEQGEMLVIYDYSATR 595 (834)
Q Consensus 520 ~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~f~~E~~~l~~-l~HpNiv~l~g~~~~~~~~~lv~Ey~~~g 595 (834)
.||+|+||.||+|... ++..||||.++... .....+.+..|..++.. .+||||+++++++...+..++||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg 81 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 5899999999999964 47889999986432 12223455667777765 48999999999999999999999999999
Q ss_pred chhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCCC
Q 003278 596 ILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHG 675 (834)
Q Consensus 596 ~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~~ 675 (834)
+|..++.... .+++.....++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~L~~~~~~~~------~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-- 150 (316)
T cd05592 82 DLMFHIQSSG------RFDEARARFYAAEIICGLQFLHK---KGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-- 150 (316)
T ss_pred cHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC--
Confidence 9998886432 37778888899999999999997 699999999999999999999999999997542211
Q ss_pred CcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCcccccccc
Q 003278 676 HRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDL 755 (834)
Q Consensus 676 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 755 (834)
.......||+.|||||++.+..++.++|||||||++|||+||+.||....... +...+ . ...+
T Consensus 151 -----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~-~~~~i---~-~~~~------- 213 (316)
T cd05592 151 -----GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDE-LFDSI---L-NDRP------- 213 (316)
T ss_pred -----CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHH-HHHHH---H-cCCC-------
Confidence 11234679999999999998899999999999999999999999986443221 11111 1 1111
Q ss_pred ccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHH
Q 003278 756 SLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQI 790 (834)
Q Consensus 756 ~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v 790 (834)
.++... ..++ ..++.+||+.||++||++.+.
T Consensus 214 ~~~~~~-~~~~---~~ll~~~l~~~P~~R~~~~~~ 244 (316)
T cd05592 214 HFPRWI-SKEA---KDCLSKLFERDPTKRLGVDGD 244 (316)
T ss_pred CCCCCC-CHHH---HHHHHHHccCCHHHcCCChHH
Confidence 111111 2333 345558999999999998643
No 310
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.5e-36 Score=321.51 Aligned_cols=250 Identities=24% Similarity=0.382 Sum_probs=195.8
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEccC
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMP 191 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 191 (834)
+|...+.||+|+||.||+|.+. ++..||||.+.... ...+.|.+|+.++.+++||||++++++|...+..++||||++
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 5 DLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HeEEeeEecCcccceEEEEEec-CCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 4677789999999999999884 45679999886432 334678999999999999999999999999999999999999
Q ss_pred CCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhh
Q 003278 192 NRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHE 271 (834)
Q Consensus 192 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 271 (834)
+|+|.+++.... ..++|..++.++.|++.||+|||+. +++|+||||+|||++.++.+||+|||+++.....
T Consensus 83 ~~~l~~~i~~~~------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~ 153 (256)
T cd05113 83 NGCLLNYLREHG------KRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDD 153 (256)
T ss_pred CCcHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCC
Confidence 999999986432 2589999999999999999999985 9999999999999999999999999998754221
Q ss_pred hhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCccchHHHHH
Q 003278 272 LQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQIILLDWI 350 (834)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~~l~~~~ 350 (834)
.. .......++..|+|||.+..+ .++.++|||||||++|||+| |+.|+...... .....+
T Consensus 154 ~~---------------~~~~~~~~~~~y~~pe~~~~~-~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~---~~~~~~ 214 (256)
T cd05113 154 EY---------------TSSVGSKFPVRWSPPEVLLYS-KFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS---ETVEKV 214 (256)
T ss_pred ce---------------eecCCCccChhhCCHHHHhcC-cccchhHHHHHHHHHHHHhcCCCCCcCcCCHH---HHHHHH
Confidence 00 001122366789999998654 57889999999999999999 98887543211 111111
Q ss_pred HHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHh
Q 003278 351 RRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAV 405 (834)
Q Consensus 351 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l 405 (834)
..+..... + .. ....+.+++..||+.+|.+||++.++++.|
T Consensus 215 ----~~~~~~~~--~----~~----~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~ 255 (256)
T cd05113 215 ----SQGLRLYR--P----HL----ASEKVYAIMYSCWHEKAEERPTFQQLLSSI 255 (256)
T ss_pred ----hcCCCCCC--C----CC----CCHHHHHHHHHHcCCCcccCCCHHHHHHhh
Confidence 11111100 0 11 125688999999999999999999999876
No 311
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=2.9e-36 Score=323.04 Aligned_cols=248 Identities=21% Similarity=0.336 Sum_probs=197.8
Q ss_pred CcCcCCcccccCCcEEEEEEEC-CCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEecc
Q 003278 514 NFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYS 592 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~ 592 (834)
.|...++||+|+||.||+|... ++..||||.+...........|.+|+.++++++||||+++++++.+....++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 4566778999999999999864 578899999876554555578999999999999999999999999999999999999
Q ss_pred CCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccC
Q 003278 593 ATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRN 672 (834)
Q Consensus 593 ~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~ 672 (834)
++|+|.+++... .+++.....++.|++.||+|||+ .+++|+||+|+||++++++.++++|||++..+...
T Consensus 85 ~~~~L~~~i~~~-------~l~~~~~~~~~~~l~~~l~~lh~---~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06640 85 GGGSALDLLRAG-------PFDEFQIATMLKEILKGLDYLHS---EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT 154 (277)
T ss_pred CCCcHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHh---CCccCcCCChhhEEEcCCCCEEEcccccceeccCC
Confidence 999999988532 36778888999999999999996 69999999999999999999999999999765432
Q ss_pred CCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCccccc
Q 003278 673 DHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAEL 752 (834)
Q Consensus 673 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (834)
.. ......||..|+|||++.+..++.++|||||||++|||+||+.|+....+.... ... ....
T Consensus 155 ~~-------~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~-~~~----~~~~----- 217 (277)
T cd06640 155 QI-------KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVL-FLI----PKNN----- 217 (277)
T ss_pred cc-------ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHh-hhh----hcCC-----
Confidence 11 122346888999999999888999999999999999999999998654332211 100 0000
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 003278 753 VDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSI 793 (834)
Q Consensus 753 ~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~ 793 (834)
.+.+ .......+.+++.+||+.+|++|||+.+|++.
T Consensus 218 -~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 218 -PPTL----TGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred -CCCC----chhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 0111 11222345667779999999999999999763
No 312
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.5e-36 Score=336.27 Aligned_cols=217 Identities=23% Similarity=0.351 Sum_probs=175.1
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc---ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK---GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVY 187 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 187 (834)
++|+..+.||+|+||.||+|....+++.||||++... .......+.+|+.++.+++||||+++++++.+.+.+++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 4688889999999999999999889999999998643 1233456888999999999999999999999999999999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhh
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARW 267 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 267 (834)
||+++|+|.+++... ..+++.....++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 81 E~~~gg~L~~~l~~~-------~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~ 150 (360)
T cd05627 81 EFLPGGDMMTLLMKK-------DTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTG 150 (360)
T ss_pred eCCCCccHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCcc
Confidence 999999999998643 3578899999999999999999985 999999999999999999999999999875
Q ss_pred hhhhhhhhhhcc--------------c-cccc----ccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHH
Q 003278 268 LEHELQYQMRTS--------------S-ARNH----QFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEV 328 (834)
Q Consensus 268 ~~~~~~~~~~~~--------------~-~~~~----~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~El 328 (834)
+........... . .... ..........+||+.|+|||++... .++.++|||||||++|||
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~-~~~~~~DiwSlGvilyel 229 (360)
T cd05627 151 LKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQT-GYNKLCDWWSLGVIMYEM 229 (360)
T ss_pred cccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCC-CCCCcceeccccceeeec
Confidence 532110000000 0 0000 0000012345799999999998654 678999999999999999
Q ss_pred HhCCccCCCC
Q 003278 329 VSGRRAVDLT 338 (834)
Q Consensus 329 ltG~~p~~~~ 338 (834)
+||+.||...
T Consensus 230 ~tG~~Pf~~~ 239 (360)
T cd05627 230 LIGYPPFCSE 239 (360)
T ss_pred ccCCCCCCCC
Confidence 9999998643
No 313
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=4e-36 Score=323.01 Aligned_cols=260 Identities=19% Similarity=0.299 Sum_probs=193.6
Q ss_pred hCcCcCCcccccCCcEEEEEEEC-----CCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEee--CCeE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLD-----NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTE--QGEM 585 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~-----~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~--~~~~ 585 (834)
.+|...+.||+|+||.||+|..+ ++..||+|.+.... ....+.|.+|++++++++|||||++++++.. ....
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 82 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST-AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 82 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCce
Confidence 35666788999999999999753 47789999986443 3344678999999999999999999998754 3468
Q ss_pred EEEEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeee
Q 003278 586 LVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFAL 665 (834)
Q Consensus 586 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGl 665 (834)
++||||+++|+|.+++.... ..++|..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~-----~~l~~~~~~~~~~~l~~aL~~LH~---~~i~H~dlkp~nili~~~~~~~l~dfg~ 154 (284)
T cd05081 83 RLVMEYLPYGSLRDYLQKHR-----ERLDHRKLLLYASQICKGMEYLGS---KRYVHRDLATRNILVESENRVKIGDFGL 154 (284)
T ss_pred EEEEEecCCCCHHHHHHhcC-----cCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHhhEEECCCCeEEECCCcc
Confidence 89999999999999986432 248899999999999999999996 6899999999999999999999999999
Q ss_pred ccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHH--------
Q 003278 666 AEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVK-------- 737 (834)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~-------- 737 (834)
++.+........ ......++..|+|||++.++.++.++|||||||++|||+||..|..... .....
T Consensus 155 ~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~--~~~~~~~~~~~~~ 228 (284)
T cd05081 155 TKVLPQDKEYYK----VREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPP--AEFMRMMGNDKQG 228 (284)
T ss_pred cccccCCCccee----ecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcc--hhhhhhccccccc
Confidence 987543221100 0111234456999999998899999999999999999999876643211 10000
Q ss_pred -----HHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccC
Q 003278 738 -----RVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGN 797 (834)
Q Consensus 738 -----~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~ 797 (834)
...+....... ....... + ..+.+++.+||+.+|++||||.+|++.|+.+
T Consensus 229 ~~~~~~~~~~~~~~~~------~~~~~~~-~---~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 229 QMIVYHLIELLKNNGR------LPAPPGC-P---AEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred ccchHHHHHHHhcCCc------CCCCCCC-C---HHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 00000000000 0001111 1 2456677799999999999999999999764
No 314
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=2e-36 Score=322.98 Aligned_cols=254 Identities=28% Similarity=0.434 Sum_probs=194.4
Q ss_pred CeeeccCCeEEEEEEECCCCe--EEEEEEeccc-ChhhHHHHHHHHHHHHhC-CCCceeeEeeeEEeCCEEEEEEEccCC
Q 003278 117 EVLGSGGFGKVYRAVLPSDGT--VVAVKCLAEK-GERFEKTFAAELVAVAHL-RHRNLVRLRGWCVHEDQLLLVYDYMPN 192 (834)
Q Consensus 117 ~~LG~G~fG~Vy~~~~~~~g~--~vAvK~l~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 192 (834)
++||+|+||.||+|.+..++. .+|+|.+... .....+.+.+|+.++.++ +||||++++++|...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 469999999999999977775 4688888643 234556789999999999 899999999999999999999999999
Q ss_pred CCHhHHHhcCCCc---------cccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeecc
Q 003278 193 RSLDRVLFRRPEN---------LEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFG 263 (834)
Q Consensus 193 gsL~~~l~~~~~~---------~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 263 (834)
|+|.+++...... ......+++.++..++.|++.||+|||+. +++||||||+|||+++++.+||+|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECCCC
Confidence 9999998654211 01123589999999999999999999985 99999999999999999999999999
Q ss_pred chhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCc
Q 003278 264 LARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDD 342 (834)
Q Consensus 264 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~ 342 (834)
+++...... ......+++.|+|||++... .++.++|||||||++|||+| |+.||......
T Consensus 158 l~~~~~~~~-----------------~~~~~~~~~~y~apE~~~~~-~~~~~~Di~slG~il~el~~~g~~pf~~~~~~- 218 (270)
T cd05047 158 LSRGQEVYV-----------------KKTMGRLPVRWMAIESLNYS-VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA- 218 (270)
T ss_pred Cccccchhh-----------------hccCCCCccccCChHHHccC-CCCchhhHHHHHHHHHHHHcCCCCCccccCHH-
Confidence 986321100 01112246789999988654 57899999999999999997 99988542211
Q ss_pred cchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcC
Q 003278 343 QIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGS 408 (834)
Q Consensus 343 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~ 408 (834)
+...... .+..... . . .....+.+++..||+.+|.+||++.+++..|...
T Consensus 219 -----~~~~~~~-~~~~~~~-----~-~----~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~ 268 (270)
T cd05047 219 -----ELYEKLP-QGYRLEK-----P-L----NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 268 (270)
T ss_pred -----HHHHHHh-CCCCCCC-----C-C----cCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence 1111111 1111100 0 0 1123578999999999999999999999998754
No 315
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=2.6e-36 Score=323.73 Aligned_cols=257 Identities=25% Similarity=0.387 Sum_probs=199.3
Q ss_pred cCCCCCCCeeeccCCeEEEEEEECCCCe----EEEEEEeccc-ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEE
Q 003278 110 SNGFDEDEVLGSGGFGKVYRAVLPSDGT----VVAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLL 184 (834)
Q Consensus 110 t~~f~~~~~LG~G~fG~Vy~~~~~~~g~----~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~ 184 (834)
.++|+..++||+|+||.||+|.+..+|. .||||.+... .....+.+.+|+.++..++||||++++++|... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcE
Confidence 3568888999999999999999866665 4899988643 334567789999999999999999999999754 578
Q ss_pred EEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccc
Q 003278 185 LVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGL 264 (834)
Q Consensus 185 lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 264 (834)
++|||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+
T Consensus 85 l~~~~~~~g~l~~~l~~~------~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~ 155 (279)
T cd05109 85 LVTQLMPYGCLLDYVREN------KDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGL 155 (279)
T ss_pred EEEEcCCCCCHHHHHhhc------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCc
Confidence 999999999999998653 23589999999999999999999985 999999999999999999999999999
Q ss_pred hhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCcc
Q 003278 265 ARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQ 343 (834)
Q Consensus 265 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~ 343 (834)
++.+...... .......+++.|+|||.+... .++.++|||||||++|||+| |..|++....
T Consensus 156 ~~~~~~~~~~--------------~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--- 217 (279)
T cd05109 156 ARLLDIDETE--------------YHADGGKVPIKWMALESILHR-RFTHQSDVWSYGVTVWELMTFGAKPYDGIPA--- 217 (279)
T ss_pred eeecccccce--------------eecCCCccchhhCCHHHhccC-CCCchhHHHHHHHHHHHHHcCCCCCCCCCCH---
Confidence 9865321100 001112356789999988654 57899999999999999998 8888754321
Q ss_pred chHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcC
Q 003278 344 IILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGS 408 (834)
Q Consensus 344 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~ 408 (834)
..+..++. .+..... . .. ....+.+++..||+.||+.||++.++++.|...
T Consensus 218 ~~~~~~~~----~~~~~~~-~-----~~----~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~ 268 (279)
T cd05109 218 REIPDLLE----KGERLPQ-P-----PI----CTIDVYMIMVKCWMIDSECRPRFRELVDEFSRM 268 (279)
T ss_pred HHHHHHHH----CCCcCCC-C-----cc----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence 11222222 1111110 0 11 123578899999999999999999999988764
No 316
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=2e-36 Score=322.77 Aligned_cols=257 Identities=21% Similarity=0.348 Sum_probs=197.2
Q ss_pred cCcCCcccccCCcEEEEEEECC-C---cEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEe
Q 003278 515 FSESQRVAEMDFGTAYQGFLDN-H---QYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYD 590 (834)
Q Consensus 515 f~~~~~ig~g~~g~vy~~~~~~-~---~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~E 590 (834)
+...+.||+|+||.||+|.... + ..||||.+...........|..|+.++++++||||+++++++.+....++|||
T Consensus 6 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 85 (269)
T cd05065 6 VKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITE 85 (269)
T ss_pred eEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEe
Confidence 4556789999999999999643 2 36999998765555566789999999999999999999999999999999999
Q ss_pred ccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccc
Q 003278 591 YSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLT 670 (834)
Q Consensus 591 y~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~ 670 (834)
|+++|+|..++.... ..+++..++.++.|++.||+|||+ .+++||||||+|||++.++.+|++|||++....
T Consensus 86 ~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~~l~~al~~lH~---~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~ 157 (269)
T cd05065 86 FMENGALDSFLRQND-----GQFTVIQLVGMLRGIAAGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 157 (269)
T ss_pred cCCCCcHHHHHhhCC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccChheEEEcCCCcEEECCCccccccc
Confidence 999999999986542 247899999999999999999996 699999999999999999999999999997654
Q ss_pred cCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcCcc
Q 003278 671 RNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRPL 749 (834)
Q Consensus 671 ~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 749 (834)
....... ........++..|+|||++.++.++.++|||||||++|||++ |..|+...... .....+. .....
T Consensus 158 ~~~~~~~--~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~-~~~~~i~----~~~~~ 230 (269)
T cd05065 158 DDTSDPT--YTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-DVINAIE----QDYRL 230 (269)
T ss_pred cCccccc--cccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH-HHHHHHH----cCCcC
Confidence 3221100 000001112457999999999999999999999999999887 98888643322 1111111 10000
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHcc
Q 003278 750 AELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDG 796 (834)
Q Consensus 750 ~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~ 796 (834)
...... + ..+.+++.+||+.+|++||+|.+|+..|+.
T Consensus 231 ------~~~~~~-~---~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 267 (269)
T cd05065 231 ------PPPMDC-P---TALHQLMLDCWQKDRNARPKFGQIVSTLDK 267 (269)
T ss_pred ------CCcccC-C---HHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 001111 1 235567779999999999999999999875
No 317
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-37 Score=335.63 Aligned_cols=247 Identities=21% Similarity=0.334 Sum_probs=194.6
Q ss_pred CcccccCCcEEEEEEECC----CcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEeccCC
Q 003278 519 QRVAEMDFGTAYQGFLDN----HQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSAT 594 (834)
Q Consensus 519 ~~ig~g~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~~ 594 (834)
++||+|.||.|++|.+.. ...||||.+...........|.+|+.+|-+|+|||+|+|||+..+ ....+|+|.++.
T Consensus 116 e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELapl 194 (1039)
T KOG0199|consen 116 ELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELAPL 194 (1039)
T ss_pred HHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhccc
Confidence 468999999999999754 346999999876655567899999999999999999999999988 678899999999
Q ss_pred CchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCC
Q 003278 595 RILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674 (834)
Q Consensus 595 g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~ 674 (834)
|+|.+.|++.. ...|--....+++.|||.||.||-+ +..|||||..+|+||.....+||+||||.+.+..++.
T Consensus 195 GSLldrLrka~----~~~llv~~Lcdya~QiA~aM~YLes---krlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned 267 (1039)
T KOG0199|consen 195 GSLLDRLRKAK----KAILLVSRLCDYAMQIAKAMQYLES---KRLVHRDLAARNLLLASPRTVKICDFGLMRALGENED 267 (1039)
T ss_pred chHHHHHhhcc----ccceeHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhhhheecccceeeeecccceeccCCCCc
Confidence 99999998622 1346666778899999999999986 7999999999999999999999999999998876654
Q ss_pred CCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcCcccccc
Q 003278 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRPLAELV 753 (834)
Q Consensus 675 ~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (834)
.+.... . ..-.+.|.|||.++.+.++.+||||+|||++|||+| |+.|+-.. +.-.+++.+. .+++.
T Consensus 268 ~Yvm~p--~--rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~-~g~qIL~~iD---~~erL----- 334 (1039)
T KOG0199|consen 268 MYVMAP--Q--RKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGC-RGIQILKNID---AGERL----- 334 (1039)
T ss_pred ceEecC--C--CcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCC-CHHHHHHhcc---ccccC-----
Confidence 331111 1 123467999999999999999999999999999998 56676432 2222233222 11111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 754 DLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 754 d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
-...++.+ ++..+|+.||..+|++||||..|..
T Consensus 335 ---pRPk~cse---dIY~imk~cWah~paDRptFsair~ 367 (1039)
T KOG0199|consen 335 ---PRPKYCSE---DIYQIMKNCWAHNPADRPTFSAIRE 367 (1039)
T ss_pred ---CCCCCChH---HHHHHHHHhccCCccccccHHHHHH
Confidence 11244554 4556667999999999999999974
No 318
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=7.1e-37 Score=339.27 Aligned_cols=257 Identities=20% Similarity=0.234 Sum_probs=195.9
Q ss_pred CcCcCCcccccCCcEEEEEEEC-CCcEEEEEEecCCC--ChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEe
Q 003278 514 NFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSK--CPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYD 590 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~E 590 (834)
+|...+.||+|+||+||+|... ++..||||++.... .......|.+|+.++..++||||+++++++.+.+..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVME 81 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEc
Confidence 5677788999999999999965 68899999986432 12334678899999999999999999999999999999999
Q ss_pred ccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccc
Q 003278 591 YSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLT 670 (834)
Q Consensus 591 y~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~ 670 (834)
|+++|+|.+++...+ .+++.....++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++..+.
T Consensus 82 ~~~~~~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH~---~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~ 152 (350)
T cd05573 82 YMPGGDLMNLLIRKD------VFPEETARFYIAELVLALDSVHK---LGFIHRDIKPDNILIDADGHIKLADFGLCKKMN 152 (350)
T ss_pred CCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEeecCCCCccCc
Confidence 999999999987542 37788888999999999999997 799999999999999999999999999997654
Q ss_pred cCCCC----------------------CcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCC
Q 003278 671 RNDHG----------------------HRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDF 728 (834)
Q Consensus 671 ~~~~~----------------------~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~ 728 (834)
..... ............||+.|+|||++.+..++.++|||||||+||||+||+.||..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~ 232 (350)
T cd05573 153 KAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYS 232 (350)
T ss_pred ccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCC
Confidence 32200 00000112345799999999999999999999999999999999999999875
Q ss_pred CCCchhHHHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCC-hhHHHH
Q 003278 729 RLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPS-MRQILS 792 (834)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPt-m~~v~~ 792 (834)
..+... ...+..+ ... ..-+. ...+ ..++ ..+..+|+. ||.+||+ +.++++
T Consensus 233 ~~~~~~-~~~i~~~---~~~---~~~p~-~~~~-~~~~---~~li~~ll~-dp~~R~~s~~~ll~ 284 (350)
T cd05573 233 DTLQET-YNKIINW---KES---LRFPP-DPPV-SPEA---IDLICRLLC-DPEDRLGSFEEIKS 284 (350)
T ss_pred CCHHHH-HHHHhcc---CCc---ccCCC-CCCC-CHHH---HHHHHHHcc-ChhhcCCCHHHHhc
Confidence 432211 1111110 000 00000 0011 2333 344457887 9999999 999986
No 319
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.6e-36 Score=360.22 Aligned_cols=259 Identities=23% Similarity=0.342 Sum_probs=199.8
Q ss_pred hhcCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc--ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeC--CEE
Q 003278 108 IGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK--GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHE--DQL 183 (834)
Q Consensus 108 ~~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~--~~~ 183 (834)
...++|.+.+.||+|+||.||+|....++..||+|.+... .......|..|+.+|.+|+|||||+++++|... +.+
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l 89 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL 89 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence 3456899999999999999999999999999999988643 334557789999999999999999999988654 568
Q ss_pred EEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccC----CCeecCCCCCCceEECCC-----
Q 003278 184 LLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLE----TQIIHRDVKTSNVMLDSQ----- 254 (834)
Q Consensus 184 ~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~----~~iiHrDlKp~NILld~~----- 254 (834)
||||||+++|+|..+|..... ....+++..++.|+.||+.||.|||+... .+||||||||+||||+.+
T Consensus 90 yIVMEY~~gGSL~~lL~k~~~---~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg 166 (1021)
T PTZ00266 90 YILMEFCDAGDLSRNIQKCYK---MFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIG 166 (1021)
T ss_pred EEEEeCCCCCcHHHHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccc
Confidence 999999999999999865321 13468999999999999999999998531 359999999999999642
Q ss_pred ------------CceEEeeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCcccccc-CCCCCcccceeeh
Q 003278 255 ------------YNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQK-GSVATAKSDVFSF 321 (834)
Q Consensus 255 ------------~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~~~~ksDV~Sf 321 (834)
..+||+|||+++.+.... ......||+.|+|||.+.. ...++.++|||||
T Consensus 167 ~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s-----------------~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSL 229 (1021)
T PTZ00266 167 KITAQANNLNGRPIAKIGDFGLSKNIGIES-----------------MAHSCVGTPYYWSPELLLHETKSYDDKSDMWAL 229 (1021)
T ss_pred cccccccccCCCCceEEccCCccccccccc-----------------cccccCCCccccCHHHHhccCCCCCchhHHHHH
Confidence 348999999997542210 1234469999999998853 2357889999999
Q ss_pred hhHHHHHHhCCccCCCCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhH
Q 003278 322 GIVVLEVVSGRRAVDLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWV 401 (834)
Q Consensus 322 Gvvl~ElltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V 401 (834)
||+||||+||+.||..... ....+..+ ..+. +..+ ..+ ...+.+|+..||+.+|.+||++.++
T Consensus 230 G~ILYELLTGk~PF~~~~~-----~~qli~~l-k~~p-----~lpi--~~~----S~eL~dLI~~~L~~dPeeRPSa~Ql 292 (1021)
T PTZ00266 230 GCIIYELCSGKTPFHKANN-----FSQLISEL-KRGP-----DLPI--KGK----SKELNILIKNLLNLSAKERPSALQC 292 (1021)
T ss_pred HHHHHHHHHCCCCCCcCCc-----HHHHHHHH-hcCC-----CCCc--CCC----CHHHHHHHHHHhcCChhHCcCHHHH
Confidence 9999999999999864221 11112211 1110 1111 111 1357889999999999999999999
Q ss_pred HH
Q 003278 402 IE 403 (834)
Q Consensus 402 ~~ 403 (834)
+.
T Consensus 293 L~ 294 (1021)
T PTZ00266 293 LG 294 (1021)
T ss_pred hc
Confidence 84
No 320
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=3.2e-36 Score=356.54 Aligned_cols=268 Identities=18% Similarity=0.251 Sum_probs=199.0
Q ss_pred hCcCcCCcccccCCcEEEEEEEC-CCcEEEEEEecCCC--ChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSK--CPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIY 589 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~ 589 (834)
++|...++||+|+||.||+|... ++..||||++.... .+...++|.+|++++++++|||||++++++.+.+..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 35677789999999999999864 58899999987542 3345678999999999999999999999999999999999
Q ss_pred eccCCCchhhhhhcCCCC-----CCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeee
Q 003278 590 DYSATRILSHLLFHNNHR-----IGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFA 664 (834)
Q Consensus 590 Ey~~~g~L~~~l~~~~~~-----~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfG 664 (834)
||+++|+|.+++...... .....+++...+.++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs---~GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS---KGVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHH---CCccccCCchheEEEcCCCCEEEEecC
Confidence 999999999988642110 011246778889999999999999996 689999999999999999999999999
Q ss_pred eccccccCCCCCc-----------ccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCch
Q 003278 665 LAEFLTRNDHGHR-----------KATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEG 733 (834)
Q Consensus 665 la~~~~~~~~~~~-----------~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~ 733 (834)
+++.......... ..........||+.|||||++.+..++.++|||||||++|||+||+.|+.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 9987522110000 00011123579999999999999999999999999999999999999986432211
Q ss_pred hHHHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCC-ChhHHHHHHcc
Q 003278 734 LLVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRP-SMRQILSILDG 796 (834)
Q Consensus 734 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RP-tm~~v~~~L~~ 796 (834)
.... .....+. ... + .... +. .+.+++.+|++.||++|| ++.++.+.|+.
T Consensus 239 i~~~-----~~i~~P~-~~~-p--~~~i-P~---~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~ 289 (932)
T PRK13184 239 ISYR-----DVILSPI-EVA-P--YREI-PP---FLSQIAMKALAVDPAERYSSVQELKQDLEP 289 (932)
T ss_pred hhhh-----hhccChh-hcc-c--cccC-CH---HHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 1000 0000000 000 0 0011 12 345666799999999996 56667766654
No 321
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=2.7e-36 Score=331.73 Aligned_cols=241 Identities=13% Similarity=0.172 Sum_probs=185.3
Q ss_pred cccccCCcEEEEEEEC-CCcEEEEEEecCCC--ChhHHHHHHHHHHHHHhc-cCCCceeEEEEEeeCCeEEEEEeccCCC
Q 003278 520 RVAEMDFGTAYQGFLD-NHQYVLVKRLGMSK--CPALRTRFSNELQNLARL-RHRNLVQLCGWCTEQGEMLVIYDYSATR 595 (834)
Q Consensus 520 ~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~f~~E~~~l~~l-~HpNiv~l~g~~~~~~~~~lv~Ey~~~g 595 (834)
.||+|+||.||++... ++..||||.++... .....+.+.+|+.++.++ +|||||++++++.+.+..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g 81 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGG 81 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 5899999999999864 57889999987532 223345688999999998 7999999999999999999999999999
Q ss_pred chhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCCC
Q 003278 596 ILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHG 675 (834)
Q Consensus 596 ~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~~ 675 (834)
+|..++...+ .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~L~~~~~~~~------~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~--- 149 (329)
T cd05588 82 DLMFHMQRQR------KLPEEHARFYSAEISLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP--- 149 (329)
T ss_pred CHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEECcCccccccccC---
Confidence 9988875432 38889999999999999999996 69999999999999999999999999998642211
Q ss_pred CcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCC----chhHHHHHHHHHhhcCcccc
Q 003278 676 HRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLP----EGLLVKRVHEFEARKRPLAE 751 (834)
Q Consensus 676 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~ 751 (834)
........||+.|||||++.+..++.++|||||||++|||+||+.||+.... .............. ..
T Consensus 150 ----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-~~--- 221 (329)
T cd05588 150 ----GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILE-KQ--- 221 (329)
T ss_pred ----CCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHc-CC---
Confidence 1112346899999999999999999999999999999999999999963211 11111111111111 11
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCh
Q 003278 752 LVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSM 787 (834)
Q Consensus 752 ~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm 787 (834)
..++...+ . .+..++.+|+..||.+|||+
T Consensus 222 ---~~~p~~~~-~---~~~~li~~~L~~dP~~R~~~ 250 (329)
T cd05588 222 ---IRIPRSLS-V---KASSVLKGFLNKDPKERLGC 250 (329)
T ss_pred ---CCCCCCCC-H---HHHHHHHHHhccCHHHcCCC
Confidence 01111222 2 34455668999999999983
No 322
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=3.7e-36 Score=322.58 Aligned_cols=255 Identities=23% Similarity=0.381 Sum_probs=202.2
Q ss_pred cCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEc
Q 003278 110 SNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDY 189 (834)
Q Consensus 110 t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 189 (834)
.++|+..+.||+|+||.||+|.+..++..||+|.+........+.|.+|+.++++++||||+++++++...+..++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 35688889999999999999999888999999998766566667899999999999999999999999999999999999
Q ss_pred cCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhh
Q 003278 190 MPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLE 269 (834)
Q Consensus 190 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~ 269 (834)
+++++|.+++... ..++++.....++.|++.||.|||+. +|+||||||+||+++.++.++|+|||++....
T Consensus 84 ~~~~~L~~~~~~~------~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~ 154 (280)
T cd06611 84 CDGGALDSIMLEL------ERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNK 154 (280)
T ss_pred cCCCcHHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhc
Confidence 9999999998643 23589999999999999999999986 99999999999999999999999999986532
Q ss_pred hhhhhhhhcccccccccccccceeeeccccCCCcccccc----CCCCCcccceeehhhHHHHHHhCCccCCCCCCCccch
Q 003278 270 HELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQK----GSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII 345 (834)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~----~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~ 345 (834)
... .......||+.|+|||.+.. ...++.++|||||||++|||++|+.|+...... ..
T Consensus 155 ~~~----------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~--~~ 216 (280)
T cd06611 155 STL----------------QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM--RV 216 (280)
T ss_pred ccc----------------cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH--HH
Confidence 210 01234568999999998742 234677999999999999999999998643211 11
Q ss_pred HHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 346 LLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 346 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
+ .... .+.......+ ..+ ...+.+++..||+.+|.+||++.+|++.
T Consensus 217 ~----~~~~-~~~~~~~~~~----~~~----~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 217 L----LKIL-KSEPPTLDQP----SKW----SSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred H----HHHh-cCCCCCcCCc----ccC----CHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 1 1111 1110000000 011 1357789999999999999999999864
No 323
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=9.6e-37 Score=335.52 Aligned_cols=242 Identities=26% Similarity=0.323 Sum_probs=185.9
Q ss_pred eeccCCeEEEEEEECCCCeEEEEEEecccC---hhhHHHHHHHHHHHHhC---CCCceeeEeeeEEeCCEEEEEEEccCC
Q 003278 119 LGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAELVAVAHL---RHRNLVRLRGWCVHEDQLLLVYDYMPN 192 (834)
Q Consensus 119 LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l---~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 192 (834)
||+|+||+||+|+...+|+.||||++.... ......+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999998899999999986432 12233455677777655 799999999999999999999999999
Q ss_pred CCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhh
Q 003278 193 RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHEL 272 (834)
Q Consensus 193 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~ 272 (834)
|+|..++... ..+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~l~~~-------~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~ 150 (330)
T cd05586 81 GELFWHLQKE-------GRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDN 150 (330)
T ss_pred ChHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC
Confidence 9999888542 3588899999999999999999985 99999999999999999999999999987421110
Q ss_pred hhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHHHH
Q 003278 273 QYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIRR 352 (834)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~~~ 352 (834)
.......||+.|+|||.+.....++.++|||||||++|||+||+.||...... .....
T Consensus 151 ----------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~------~~~~~ 208 (330)
T cd05586 151 ----------------KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQ------QMYRN 208 (330)
T ss_pred ----------------CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHH------HHHHH
Confidence 01234569999999999875555789999999999999999999998643211 11111
Q ss_pred HhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHH
Q 003278 353 LSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIE 403 (834)
Q Consensus 353 ~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~ 403 (834)
. ..+.. ++.....+ ..+.++...||+.||.+||++.+.++
T Consensus 209 i-~~~~~------~~~~~~~~----~~~~~li~~~L~~~P~~R~~~~~~~~ 248 (330)
T cd05586 209 I-AFGKV------RFPKNVLS----DEGRQFVKGLLNRNPQHRLGAHRDAV 248 (330)
T ss_pred H-HcCCC------CCCCccCC----HHHHHHHHHHcCCCHHHCCCCCCCHH
Confidence 1 11111 11111111 34678899999999999996554333
No 324
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=4.7e-36 Score=318.17 Aligned_cols=252 Identities=22% Similarity=0.371 Sum_probs=195.6
Q ss_pred CcCcCCcccccCCcEEEEEEECCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEeccC
Q 003278 514 NFSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSA 593 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~ 593 (834)
+|...++||+|+||.||+|...++..||+|.+...... .+.|.+|+.++++++||||+++++++.+ ...+++|||++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~--~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~~ 83 (260)
T cd05070 7 SLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMS--PESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVTEYMS 83 (260)
T ss_pred HhhhhheeccccCceEEEEEecCCceeEEEEecCCCCC--HHHHHHHHHHHHhcCCCceEEEEeEECC-CCcEEEEEecC
Confidence 45667889999999999999888888999998754332 3579999999999999999999998854 56889999999
Q ss_pred CCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCC
Q 003278 594 TRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRND 673 (834)
Q Consensus 594 ~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~ 673 (834)
+++|.+++.... ...+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+|++|||++..+....
T Consensus 84 ~~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05070 84 KGSLLDFLKDGE----GRALKLPNLVDMAAQVAAGMAYIER---MNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNE 156 (260)
T ss_pred CCcHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEEeCCceEEeCCceeeeeccCcc
Confidence 999999986532 1247899999999999999999997 689999999999999999999999999997654321
Q ss_pred CCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcCccccc
Q 003278 674 HGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRPLAEL 752 (834)
Q Consensus 674 ~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (834)
. .......|+..|+|||++.+..++.++|||||||++|||+| |..|+...... ....... .. ..
T Consensus 157 ~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~-~~~~~~~---~~-~~---- 221 (260)
T cd05070 157 Y------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR-EVLEQVE---RG-YR---- 221 (260)
T ss_pred c------ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH-HHHHHHH---cC-CC----
Confidence 1 01112245678999999988899999999999999999999 78887543221 1111111 00 00
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHcc
Q 003278 753 VDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDG 796 (834)
Q Consensus 753 ~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~ 796 (834)
....... + ..+.+++.+||..+|++|||+.++.+.|+.
T Consensus 222 --~~~~~~~-~---~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 222 --MPCPQDC-P---ISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred --CCCCCcC-C---HHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0111111 1 245667779999999999999999998864
No 325
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.4e-37 Score=332.69 Aligned_cols=252 Identities=26% Similarity=0.384 Sum_probs=203.9
Q ss_pred hCcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCC-ChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCe-EEEEE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSK-CPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGE-MLVIY 589 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~-~~lv~ 589 (834)
++|...+.+|+|+||.++.... .+...+++|.+.... .+..++.-.+|+.++++++|||||.+++.+.+++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 3566678899999999987663 345678899887654 33345567899999999999999999999998888 99999
Q ss_pred eccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccc
Q 003278 590 DYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFL 669 (834)
Q Consensus 590 Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~ 669 (834)
+||.||+|.+.+.... ...++....++++.|++.|++|||+ ..|+|||||++||+++++..+||+|||+|+.+
T Consensus 84 ~Y~eGg~l~~~i~~~k----~~~f~E~~i~~~~~Q~~~av~ylH~---~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l 156 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQK----GVLFPEERILKWFVQILLAVNYLHE---NRVLHRDLKCANIFLTKDKKVKLGDFGLAKIL 156 (426)
T ss_pred eecCCCCHHHHHHHHh----hccccHHHHHHHHHHHHHHHHHHHh---hhhhcccchhhhhhccccCceeecchhhhhhc
Confidence 9999999999997654 2347888889999999999999995 68999999999999999999999999999987
Q ss_pred ccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCcc
Q 003278 670 TRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPL 749 (834)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 749 (834)
...+ ....++.||+.||.||.+.+.+|+.|+||||+||++|||++-+.+|......+...+....
T Consensus 157 ~~~~-------~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~-------- 221 (426)
T KOG0589|consen 157 NPED-------SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRG-------- 221 (426)
T ss_pred CCch-------hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhc--------
Confidence 5542 1345789999999999999999999999999999999999999999866555544332221
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 003278 750 AELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSI 793 (834)
Q Consensus 750 ~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~ 793 (834)
.++| +++.+. .++..+++ .|+..+|+.||++.+++..
T Consensus 222 --~~~P-lp~~ys-~el~~lv~---~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 222 --LYSP-LPSMYS-SELRSLVK---SMLRKNPEHRPSALELLRR 258 (426)
T ss_pred --cCCC-CCcccc-HHHHHHHH---HHhhcCCccCCCHHHHhhC
Confidence 1111 222222 34444444 8999999999999999875
No 326
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.7e-36 Score=340.40 Aligned_cols=209 Identities=22% Similarity=0.265 Sum_probs=170.9
Q ss_pred CcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCC--ChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEe
Q 003278 514 NFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSK--CPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYD 590 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~E 590 (834)
.|...+.||+|+||.||+|.. .+++.||||.+.... .......+.+|+.++++++|||||++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 477788999999999999985 557889999986432 12334578899999999999999999999999999999999
Q ss_pred ccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccc
Q 003278 591 YSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLT 670 (834)
Q Consensus 591 y~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~ 670 (834)
|+++|+|.+++...+ .+++.....++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++..+.
T Consensus 82 ~~~gg~L~~~l~~~~------~~~e~~~~~~~~qi~~al~~lH~---~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~ 152 (382)
T cd05625 82 YIPGGDMMSLLIRMG------IFPEDLARFYIAELTCAVESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFR 152 (382)
T ss_pred CCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEeECCCCcccc
Confidence 999999999886532 36677777899999999999997 689999999999999999999999999975321
Q ss_pred cCCCCC---------------------------------------c-ccccCccccccccCccchhccccCCCCccCcch
Q 003278 671 RNDHGH---------------------------------------R-KATSGNRSVRGIFGYMSPEYIESGEATSMADVY 710 (834)
Q Consensus 671 ~~~~~~---------------------------------------~-~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~ 710 (834)
...... . .......+.+||+.|||||++.+..++.++|||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~Diw 232 (382)
T cd05625 153 WTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWW 232 (382)
T ss_pred ccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEE
Confidence 100000 0 000011245799999999999999999999999
Q ss_pred hhHHHHHHHHhCCCccCCCCC
Q 003278 711 SFGVVVLEVVTGQMAVDFRLP 731 (834)
Q Consensus 711 SfGvvl~E~~tG~~p~~~~~~ 731 (834)
||||+||||+||+.||....+
T Consensus 233 SlGvil~elltG~~Pf~~~~~ 253 (382)
T cd05625 233 SVGVILYEMLVGQPPFLAQTP 253 (382)
T ss_pred echHHHHHHHhCCCCCCCCCH
Confidence 999999999999999975543
No 327
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=6e-36 Score=320.79 Aligned_cols=248 Identities=17% Similarity=0.185 Sum_probs=188.1
Q ss_pred ccccCCcEEEEEEE-CCCcEEEEEEecCCCC--hhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEeccCCCch
Q 003278 521 VAEMDFGTAYQGFL-DNHQYVLVKRLGMSKC--PALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRIL 597 (834)
Q Consensus 521 ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~--~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~~g~L 597 (834)
||+|+||.||++.. .++..+|+|.+..... ......+..|++++++++||||+++++++.+....++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 68999999999986 4588999999864321 11234456799999999999999999999999999999999999999
Q ss_pred hhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCCCCc
Q 003278 598 SHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHR 677 (834)
Q Consensus 598 ~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~~~~ 677 (834)
..++..... ..+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||++.......
T Consensus 81 ~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~---- 149 (277)
T cd05607 81 KYHIYNVGE----RGLEMERVIHYSAQITCGILHLHS---MDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK---- 149 (277)
T ss_pred HHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHHH---CCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc----
Confidence 888754322 247889999999999999999996 699999999999999999999999999987653221
Q ss_pred ccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCcccccccccc
Q 003278 678 KATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSL 757 (834)
Q Consensus 678 ~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 757 (834)
......||..|+|||++.++.++.++|||||||++|||+||+.|+................ ....+...
T Consensus 150 ----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~------~~~~~~~~- 218 (277)
T cd05607 150 ----TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRT------LEDEVKFE- 218 (277)
T ss_pred ----eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHh------hccccccc-
Confidence 1123468999999999999899999999999999999999999986432211110100000 00000000
Q ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHH
Q 003278 758 NGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSIL 794 (834)
Q Consensus 758 ~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L 794 (834)
...+ ..+ +.+++..||+.||++||+++|+++.+
T Consensus 219 ~~~~-~~~---~~~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 219 HQNF-TEE---SKDICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred cccC-CHH---HHHHHHHHhccCHhhCCCCccchhhh
Confidence 0111 223 44555689999999999998876433
No 328
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-37 Score=316.25 Aligned_cols=267 Identities=24% Similarity=0.313 Sum_probs=202.0
Q ss_pred hcCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecc--cChhhHHHHHHHHHHHHhCCCCceeeEeeeEEe-----CC
Q 003278 109 GSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAE--KGERFEKTFAAELVAVAHLRHRNLVRLRGWCVH-----ED 181 (834)
Q Consensus 109 ~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~--~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~-----~~ 181 (834)
....|...+.||+|+||.|..+..+.+|..||||++.. .+....++-.+|+++|+.++|+|||.+++.+.. -+
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 34456667899999999999999999999999999863 344556778899999999999999999998876 24
Q ss_pred EEEEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEee
Q 003278 182 QLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGD 261 (834)
Q Consensus 182 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~D 261 (834)
.+|+|+|+| ..+|.+.+... ..|+......++.|+++||.|+|+. +|+||||||+|+|++.+..+||||
T Consensus 100 DvYiV~elM-etDL~~iik~~-------~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~D 168 (359)
T KOG0660|consen 100 DVYLVFELM-ETDLHQIIKSQ-------QDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICD 168 (359)
T ss_pred eeEEehhHH-hhHHHHHHHcC-------ccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEecc
Confidence 689999999 56898888643 3488889999999999999999984 999999999999999999999999
Q ss_pred ccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCC
Q 003278 262 FGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPD 341 (834)
Q Consensus 262 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~ 341 (834)
||+||..... ......|..+-|.+|.|||.+.....||...||||.|||+.||++|++-|.....-
T Consensus 169 FGLAR~~~~~--------------~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v 234 (359)
T KOG0660|consen 169 FGLARYLDKF--------------FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYV 234 (359)
T ss_pred ccceeecccc--------------CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchH
Confidence 9999965321 01112466778999999999988889999999999999999999999988654433
Q ss_pred ccchHHH-----------------HHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 342 DQIILLD-----------------WIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 342 ~~~~l~~-----------------~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
.+..++- -+++.... .......... ..++ ......++|....|..||.+|+|..|.++.
T Consensus 235 ~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~s--lp~~p~~~f~-~~fp-~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 235 HQLQLILELLGTPSEEDLQKIRSEKARPYIKS--LPQIPKQPFS-SIFP-NANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HHHHHHHHhcCCCCHHHHHHhccHHHHHHHHh--CCCCCCCCHH-HHcC-CCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 3322210 01111000 0000000000 0011 111245678888899999999999987753
No 329
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.6e-36 Score=326.95 Aligned_cols=251 Identities=24% Similarity=0.354 Sum_probs=200.1
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEcc
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYM 190 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 190 (834)
.+|+..+.||+|+||.||+|....++..||+|.+........+.+.+|+.+++.++||||++++++|...+..++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 98 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence 46888899999999999999998899999999987655555677889999999999999999999999999999999999
Q ss_pred CCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhh
Q 003278 191 PNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEH 270 (834)
Q Consensus 191 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~ 270 (834)
++++|.+++.. ..+++.++..++.|++.||.|||+. +|+||||||+|||++.++.++|+|||++.....
T Consensus 99 ~~~~L~~~~~~--------~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~ 167 (297)
T cd06656 99 AGGSLTDVVTE--------TCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 167 (297)
T ss_pred CCCCHHHHHHh--------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccC
Confidence 99999998853 2478899999999999999999985 999999999999999999999999999874322
Q ss_pred hhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHH
Q 003278 271 ELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWI 350 (834)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~ 350 (834)
.. .......|++.|+|||.+... .++.++|||||||++|+|+||+.||....+.....
T Consensus 168 ~~----------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~----- 225 (297)
T cd06656 168 EQ----------------SKRSTMVGTPYWMAPEVVTRK-AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY----- 225 (297)
T ss_pred Cc----------------cCcCcccCCccccCHHHHcCC-CCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee-----
Confidence 10 001234588999999988654 57899999999999999999999986433221100
Q ss_pred HHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 351 RRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 351 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
.....+ .+.+. ........+.+++..||+.+|++||++.+|++.
T Consensus 226 -~~~~~~------~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 226 -LIATNG------TPELQ---NPERLSAVFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred -eeccCC------CCCCC---CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000 00000 001112346788999999999999999999873
No 330
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.2e-36 Score=329.08 Aligned_cols=263 Identities=22% Similarity=0.290 Sum_probs=199.8
Q ss_pred hCcCcCCcccccCCcEEEEEEEC--------CCcEEEEEEecCCCChhHHHHHHHHHHHHHhc-cCCCceeEEEEEeeCC
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLD--------NHQYVLVKRLGMSKCPALRTRFSNELQNLARL-RHRNLVQLCGWCTEQG 583 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~--------~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l-~HpNiv~l~g~~~~~~ 583 (834)
++|...+.||+|+||.||++... +...+|+|.+...........+.+|+.++.++ +||||++++++|.+.+
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 45777789999999999998742 23469999987654444456788999999999 7999999999999999
Q ss_pred eEEEEEeccCCCchhhhhhcCCCC----------CCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeec
Q 003278 584 EMLVIYDYSATRILSHLLFHNNHR----------IGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLD 653 (834)
Q Consensus 584 ~~~lv~Ey~~~g~L~~~l~~~~~~----------~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld 653 (834)
..++||||+++|+|.+++...... .....++|..+++++.|++.||+|||+ .+++||||||+|||++
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nill~ 174 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVT 174 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHHheEEc
Confidence 999999999999999999754321 112358899999999999999999996 6999999999999999
Q ss_pred CCCCceEeeeeeccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCc
Q 003278 654 PDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPE 732 (834)
Q Consensus 654 ~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~ 732 (834)
+++.+||+|||+++........ .......+++.|||||++.+..++.++|||||||++|||+| |..|+... +.
T Consensus 175 ~~~~~kL~dfg~a~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~-~~ 248 (307)
T cd05098 175 EDNVMKIADFGLARDIHHIDYY-----KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PV 248 (307)
T ss_pred CCCcEEECCCcccccccccchh-----hccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcC-CH
Confidence 9999999999998765322110 01111234578999999998899999999999999999999 77777532 22
Q ss_pred hhHHHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccCC
Q 003278 733 GLLVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGND 798 (834)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~~ 798 (834)
..+...... . .. .+ ... ... ..+.+++.+||..+|++||||.+|++.|+.+-
T Consensus 249 ~~~~~~~~~---~-~~-~~-----~~~-~~~---~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~ 300 (307)
T cd05098 249 EELFKLLKE---G-HR-MD-----KPS-NCT---NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 300 (307)
T ss_pred HHHHHHHHc---C-CC-CC-----CCC-cCC---HHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence 222221111 0 00 00 011 112 24556667999999999999999999997653
No 331
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.8e-37 Score=306.17 Aligned_cols=253 Identities=25% Similarity=0.403 Sum_probs=203.4
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc-----C---hhhHHHHHHHHHHHHhC-CCCceeeEeeeEEeCC
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK-----G---ERFEKTFAAELVAVAHL-RHRNLVRLRGWCVHED 181 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~-----~---~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~ 181 (834)
++|...++||+|+.++|-++..+.+|..+|+|++... . ....+.-.+|+.+|+++ .||||++|.+++..+.
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s 96 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA 96 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence 5678889999999999999999999999999998532 1 22345567899999997 5999999999999999
Q ss_pred EEEEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEee
Q 003278 182 QLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGD 261 (834)
Q Consensus 182 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~D 261 (834)
.+++|+|.|+.|.|.++|... ..++++...+|+.|+.+|++|||.. .|+||||||+|||+|++.++||+|
T Consensus 97 F~FlVFdl~prGELFDyLts~-------VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isD 166 (411)
T KOG0599|consen 97 FVFLVFDLMPRGELFDYLTSK-------VTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISD 166 (411)
T ss_pred hhhhhhhhcccchHHHHhhhh-------eeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEec
Confidence 999999999999999999643 4688899999999999999999996 999999999999999999999999
Q ss_pred ccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCcccccc-----CCCCCcccceeehhhHHHHHHhCCccCC
Q 003278 262 FGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQK-----GSVATAKSDVFSFGIVVLEVVSGRRAVD 336 (834)
Q Consensus 262 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-----~~~~~~ksDV~SfGvvl~ElltG~~p~~ 336 (834)
||+|+.++.... -+..||||||+|||.+.. ...|+..+|+||.||++|.|+.|.+||-
T Consensus 167 FGFa~~l~~Gek-----------------LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFw 229 (411)
T KOG0599|consen 167 FGFACQLEPGEK-----------------LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFW 229 (411)
T ss_pred cceeeccCCchh-----------------HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchh
Confidence 999998754321 356789999999998742 3357888999999999999999999985
Q ss_pred CCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 337 LTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 337 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
.. .+..++ ++..+|+..- -.+. +... .....+|+.+||+.||.+|-|.+|++..
T Consensus 230 HR---kQmlML----R~ImeGkyqF-~spe-----Wadi-s~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 230 HR---KQMLML----RMIMEGKYQF-RSPE-----WADI-SATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred HH---HHHHHH----HHHHhccccc-CCcc-----hhhc-cccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 32 222222 2333444221 1111 1111 1246789999999999999999998863
No 332
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.2e-36 Score=339.88 Aligned_cols=253 Identities=19% Similarity=0.171 Sum_probs=191.9
Q ss_pred hhCcCcCCcccccCCcEEEEEEEC-CCcEEEEEEecCCC--ChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEE
Q 003278 512 TNNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSK--CPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVI 588 (834)
Q Consensus 512 t~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv 588 (834)
.++|...+.||+|+||.||++... ++..||+|.+.... .......|.+|+.+++.++||||+++++++.+.+..++|
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence 467888899999999999999864 57899999986421 122234578899999999999999999999999999999
Q ss_pred EeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccc
Q 003278 589 YDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEF 668 (834)
Q Consensus 589 ~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~ 668 (834)
|||+++|+|.+++... .++......++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||++..
T Consensus 122 ~Ey~~gg~L~~~l~~~-------~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~ 191 (370)
T cd05596 122 MEYMPGGDLVNLMSNY-------DIPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMK 191 (370)
T ss_pred EcCCCCCcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEcCCCCEEEEeccceee
Confidence 9999999999988542 25666677899999999999996 6999999999999999999999999999976
Q ss_pred cccCCCCCcccccCccccccccCccchhccccC----CCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHh
Q 003278 669 LTRNDHGHRKATSGNRSVRGIFGYMSPEYIESG----EATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEA 744 (834)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~----~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~ 744 (834)
...... ......+||+.|||||++.+. .++.++|||||||+||||+||+.||......... .. ...
T Consensus 192 ~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~-~~---i~~ 261 (370)
T cd05596 192 MDANGM------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTY-SK---IMD 261 (370)
T ss_pred ccCCCc------ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHH-HH---HHc
Confidence 432211 112245799999999998653 4788999999999999999999999754432211 11 111
Q ss_pred hcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCC--CCChhHHHH
Q 003278 745 RKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPEL--RPSMRQILS 792 (834)
Q Consensus 745 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~--RPtm~~v~~ 792 (834)
....+ .. +. .... ..++ ..++.+|+..+|++ |||+.++++
T Consensus 262 ~~~~~-~~--~~-~~~~-s~~~---~~li~~~L~~~p~r~~R~s~~ell~ 303 (370)
T cd05596 262 HKNSL-TF--PD-DIEI-SKQA---KDLICAFLTDREVRLGRNGVDEIKS 303 (370)
T ss_pred CCCcC-CC--CC-cCCC-CHHH---HHHHHHHccChhhccCCCCHHHHhc
Confidence 11100 00 00 0011 2333 44555899888987 999999975
No 333
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=2.4e-36 Score=330.18 Aligned_cols=241 Identities=17% Similarity=0.243 Sum_probs=186.0
Q ss_pred CcccccCCcEEEEEEEC-CCcEEEEEEecCCC--ChhHHHHHHHHHHHHHh-ccCCCceeEEEEEeeCCeEEEEEeccCC
Q 003278 519 QRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSK--CPALRTRFSNELQNLAR-LRHRNLVQLCGWCTEQGEMLVIYDYSAT 594 (834)
Q Consensus 519 ~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~f~~E~~~l~~-l~HpNiv~l~g~~~~~~~~~lv~Ey~~~ 594 (834)
+.||+|+||.||+|... ++..||||.+.... .......+..|..++.. ++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 35899999999999965 47889999986432 12223456678888876 4999999999999999999999999999
Q ss_pred CchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCC
Q 003278 595 RILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674 (834)
Q Consensus 595 g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~ 674 (834)
|+|..++.... .+++.....++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++......
T Consensus 81 g~L~~~l~~~~------~~~~~~~~~~~~qi~~al~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 150 (316)
T cd05619 81 GDLMFHIQSCH------KFDLPRATFYAAEIICGLQFLHS---KGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD- 150 (316)
T ss_pred CcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCC-
Confidence 99999886432 37888889999999999999996 699999999999999999999999999986432111
Q ss_pred CCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCccccccc
Q 003278 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVD 754 (834)
Q Consensus 675 ~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 754 (834)
.......||+.|||||++.+..++.++|||||||++|||+||+.||...... .+...+. . ..+
T Consensus 151 ------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~-~~~~~i~---~-~~~------ 213 (316)
T cd05619 151 ------AKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE-ELFQSIR---M-DNP------ 213 (316)
T ss_pred ------CceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH-HHHHHHH---h-CCC------
Confidence 1123467999999999999989999999999999999999999998654322 1111111 1 111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhccCCCCCCCChh-HHH
Q 003278 755 LSLNGEYNHKELMRLIKLGIACTLSNPELRPSMR-QIL 791 (834)
Q Consensus 755 ~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~-~v~ 791 (834)
...... ..+ +..+..+||+.||++||++. ++.
T Consensus 214 -~~~~~~-~~~---~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 214 -CYPRWL-TRE---AKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred -CCCccC-CHH---HHHHHHHHhccCHhhcCCChHHHH
Confidence 111111 223 34555689999999999997 553
No 334
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=2.6e-36 Score=330.56 Aligned_cols=238 Identities=16% Similarity=0.195 Sum_probs=185.0
Q ss_pred CcccccCCcEEEEEEEC-CCcEEEEEEecCCC--ChhHHHHHHHHHHHHHhc-cCCCceeEEEEEeeCCeEEEEEeccCC
Q 003278 519 QRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSK--CPALRTRFSNELQNLARL-RHRNLVQLCGWCTEQGEMLVIYDYSAT 594 (834)
Q Consensus 519 ~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~f~~E~~~l~~l-~HpNiv~l~g~~~~~~~~~lv~Ey~~~ 594 (834)
+.||+|+||.||+|... +++.||||.+.... .....+.+..|+.++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 35899999999999964 57899999986432 223345677899998876 699999999999999999999999999
Q ss_pred CchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCC
Q 003278 595 RILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674 (834)
Q Consensus 595 g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~ 674 (834)
|+|..++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~i~~~~------~l~~~~~~~~~~ql~~~L~~lH~---~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~- 150 (320)
T cd05590 81 GDLMFHIQKSR------RFDEARARFYAAEITSALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG- 150 (320)
T ss_pred chHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC-
Confidence 99998886432 37888889999999999999996 699999999999999999999999999987532111
Q ss_pred CCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCccccccc
Q 003278 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVD 754 (834)
Q Consensus 675 ~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 754 (834)
.......||+.|||||++.+..++.++|||||||++|||+||+.||....... +...+ ......
T Consensus 151 ------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~-~~~~i---~~~~~~------ 214 (320)
T cd05590 151 ------KTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDD-LFEAI---LNDEVV------ 214 (320)
T ss_pred ------CcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH-HHHHH---hcCCCC------
Confidence 11234579999999999999999999999999999999999999986443221 11111 110000
Q ss_pred cccCCCCCHHHHHHHHHHHHHhccCCCCCCCChh
Q 003278 755 LSLNGEYNHKELMRLIKLGIACTLSNPELRPSMR 788 (834)
Q Consensus 755 ~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~ 788 (834)
.... ...+ +.+++.+|++.||++||++.
T Consensus 215 --~~~~-~~~~---~~~li~~~L~~dP~~R~~~~ 242 (320)
T cd05590 215 --YPTW-LSQD---AVDILKAFMTKNPTMRLGSL 242 (320)
T ss_pred --CCCC-CCHH---HHHHHHHHcccCHHHCCCCC
Confidence 1111 1233 34555689999999999983
No 335
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.6e-36 Score=332.78 Aligned_cols=240 Identities=15% Similarity=0.187 Sum_probs=183.8
Q ss_pred CcCCcccccCCcEEEEEEEC-CCcEEEEEEecCCC--ChhHHHHHHHHHHHH---HhccCCCceeEEEEEeeCCeEEEEE
Q 003278 516 SESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSK--CPALRTRFSNELQNL---ARLRHRNLVQLCGWCTEQGEMLVIY 589 (834)
Q Consensus 516 ~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~f~~E~~~l---~~l~HpNiv~l~g~~~~~~~~~lv~ 589 (834)
...+.||+|+||.||+|... +++.||||.+.... .....+.+.+|+.++ ++++||||+++++++...+..++||
T Consensus 2 ~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~ 81 (324)
T cd05589 2 RCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVM 81 (324)
T ss_pred eEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEE
Confidence 34567999999999999864 58899999986432 122334566676554 5778999999999999999999999
Q ss_pred eccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccc
Q 003278 590 DYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFL 669 (834)
Q Consensus 590 Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~ 669 (834)
||+++|+|..++.. ..+++.....++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++..
T Consensus 82 E~~~~~~L~~~~~~-------~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~ 151 (324)
T cd05589 82 EYAAGGDLMMHIHT-------DVFSEPRAVFYAACVVLGLQYLHE---NKIVYRDLKLDNLLLDTEGFVKIADFGLCKEG 151 (324)
T ss_pred cCCCCCcHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCcEEeCcccCCccC
Confidence 99999999887743 138899999999999999999996 69999999999999999999999999998643
Q ss_pred ccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCcc
Q 003278 670 TRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPL 749 (834)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 749 (834)
.... .......||+.|||||++.+..++.++|||||||++|||+||+.||....... ....+ .....
T Consensus 152 ~~~~-------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~-~~~~i---~~~~~-- 218 (324)
T cd05589 152 MGFG-------DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEE-VFDSI---VNDEV-- 218 (324)
T ss_pred CCCC-------CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHH-HHHHH---HhCCC--
Confidence 2111 11234679999999999999999999999999999999999999986443221 11111 11100
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChh
Q 003278 750 AELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMR 788 (834)
Q Consensus 750 ~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~ 788 (834)
......+ . .+..++.+||..||++||++.
T Consensus 219 ------~~p~~~~-~---~~~~li~~~L~~dP~~R~~~~ 247 (324)
T cd05589 219 ------RYPRFLS-R---EAISIMRRLLRRNPERRLGSG 247 (324)
T ss_pred ------CCCCCCC-H---HHHHHHHHHhhcCHhHcCCCC
Confidence 0111122 2 344556689999999999543
No 336
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.3e-38 Score=364.74 Aligned_cols=545 Identities=19% Similarity=0.221 Sum_probs=352.7
Q ss_pred CCCCCCeeeccCCeEEEEEEECCC-CeEEEEEEecccC--hhhHHHHHHHHHHHHhCC-CCceeeEeeeEEeCCEEEEEE
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSD-GTVVAVKCLAEKG--ERFEKTFAAELVAVAHLR-HRNLVRLRGWCVHEDQLLLVY 187 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~-g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~-H~nIv~l~g~~~~~~~~~lV~ 187 (834)
.|...+.||+|+|+.|-......+ ...+|+|.+.... ....+....|..+-..+. |+|++++++...+.+..++++
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~ 100 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSL 100 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccccc
Confidence 466677899999999988876433 4567777765442 334444555777777776 999999999999999999999
Q ss_pred EccCCCCHhHHHh-cCCCccccCCCCCHHHHHHHHHHHHHHHHHHH-hccCCCeecCCCCCCceEECCCC-ceEEeeccc
Q 003278 188 DYMPNRSLDRVLF-RRPENLEAAAPLNWEQRKKIIRGLAAALHYLH-EQLETQIIHRDVKTSNVMLDSQY-NARLGDFGL 264 (834)
Q Consensus 188 Ey~~~gsL~~~l~-~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~~iiHrDlKp~NILld~~~-~~kl~DFGl 264 (834)
||..+|++...+. .. ....+-.....+..|+..++.|+| . .++.||||||+|.+++..+ ..|++|||+
T Consensus 101 ~~s~g~~~f~~i~~~~------~~~~~~~~~~~~~~ql~s~l~~~H~~---~~~~h~~ikP~n~~l~~s~~~l~~~df~~ 171 (601)
T KOG0590|consen 101 SYSDGGSLFSKISHPD------STGTSSSSASRYLPQLNSGLSYLHPE---NGVTHRDIKPSNSLLDESGSALKIADFGL 171 (601)
T ss_pred CcccccccccccccCC------ccCCCCcchhhhhhhhccCccccCcc---cccccCCCCCccchhccCCCcccCCCchh
Confidence 9999999987773 21 112333456679999999999999 5 4999999999999999998 999999999
Q ss_pred hhhhhh-hhhhhhhcccccccccccccceeeec-cccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCc
Q 003278 265 ARWLEH-ELQYQMRTSSARNHQFHLAETTRIGG-TIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDD 342 (834)
Q Consensus 265 a~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~G-t~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~ 342 (834)
|..... +.. .......+| ++.|+|||............|+||.|+++.-+++|..|++......
T Consensus 172 At~~~~~~g~--------------~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~ 237 (601)
T KOG0590|consen 172 ATAYRNKNGA--------------ERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD 237 (601)
T ss_pred hccccccCCc--------------ceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc
Confidence 976533 110 011233457 9999999988653455778999999999999999999988765443
Q ss_pred cchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcCCCCCCCCCCCccCC
Q 003278 343 QIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGSYSGKLPALPSFQSH 422 (834)
Q Consensus 343 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~~~~~~p~~ps~~s~ 422 (834)
+. ...|... .+......-..+. .....+...++..+|..|.+.+++...
T Consensus 238 ~~-~~~~~~~---~~~~~~~~~~~~~---------~~~~~~l~k~l~~~~~~r~s~~~~~~d------------------ 286 (601)
T KOG0590|consen 238 GR-YSSWKSN---KGRFTQLPWNSIS---------DQAHDLLHKILKENPSNRLSIEELKLD------------------ 286 (601)
T ss_pred cc-ceeeccc---ccccccCccccCC---------hhhhhcccccccCCchhcccccccccc------------------
Confidence 21 1222211 0000011111111 123444555666788888887654321
Q ss_pred CcccccCCCCCCCCCCCccccccCcccCCCcccCCCCCcccccccccccccccCCCcCCCCCCccccccCcccccCCCcc
Q 003278 423 PLYISLSSPTNTSTSNTETTRSTNTTASNTTIASPSSNYVTAAGETIYATAECGGNTESKSNNSRSQRRNSFFMVETPRE 502 (834)
Q Consensus 423 p~~~s~ssp~~~s~s~~~~s~ss~ss~s~~~~~spssn~v~a~~~~~~a~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (834)
++..... ......+ +. ..... .. . ..
T Consensus 287 ~~~~~~~---------------~~~~~~n-----~~-~~~~~-----------~~--------------------~--~~ 312 (601)
T KOG0590|consen 287 NWLSSKR---------------NGFSKSN-----PC-ADSLT-----------IA--------------------K--SP 312 (601)
T ss_pred ccccccc---------------ccccccc-----cc-ccccc-----------cc--------------------c--Cc
Confidence 1111000 0000000 00 00000 00 0 00
Q ss_pred ccHHHHHHHhhCc-CcCCcccccCCcEEEEEEEC-CCcEEEEEEec----CCCCh-hHHHHHHHHHHHHHhccCCCceeE
Q 003278 503 ISFKEIISATNNF-SESQRVAEMDFGTAYQGFLD-NHQYVLVKRLG----MSKCP-ALRTRFSNELQNLARLRHRNLVQL 575 (834)
Q Consensus 503 ~~~~el~~at~~f-~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~----~~~~~-~~~~~f~~E~~~l~~l~HpNiv~l 575 (834)
+++ +..| .....+|+|.+|.|+..... .....+.|... ..... .....+..|..+-..++|||++..
T Consensus 313 ~~~------~~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~ 386 (601)
T KOG0590|consen 313 IGF------SEKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIET 386 (601)
T ss_pred ccc------ccccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhh
Confidence 000 0001 12356899999977766532 22223333221 11111 111225668888889999999887
Q ss_pred EEEEeeCCeEEEEEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCC
Q 003278 576 CGWCTEQGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPD 655 (834)
Q Consensus 576 ~g~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~ 655 (834)
+..+.+....+-.||||++ +|..++.... .+.-..+-.++.|+..||.|||+ .+|.|||||++|++++.+
T Consensus 387 l~~~~~~~~~~~~mE~~~~-Dlf~~~~~~~------~~~~~e~~c~fKqL~~Gv~y~h~---~GiahrdlK~enll~~~~ 456 (601)
T KOG0590|consen 387 LDIVQEIDGILQSMEYCPY-DLFSLVMSNG------KLTPLEADCFFKQLLRGVKYLHS---MGLAHRDLKLENLLVTEN 456 (601)
T ss_pred HHHHhhcccchhhhhcccH-HHHHHHhccc------ccchhhhhHHHHHHHHHHHHHHh---cCceeccCccccEEEecC
Confidence 7777776666666999999 9998886542 24555667799999999999997 699999999999999999
Q ss_pred CCceEeeeeeccccccCCCCCcccccCccccccccCccchhccccCCCCcc-CcchhhHHHHHHHHhCCCccCCCCCchh
Q 003278 656 MNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSM-ADVYSFGVVVLEVVTGQMAVDFRLPEGL 734 (834)
Q Consensus 656 ~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k-~DV~SfGvvl~E~~tG~~p~~~~~~~~~ 734 (834)
+.+||+|||.+......... .......++|+-.|+|||++....|++. .||||.||++..|++|+.|+-.......
T Consensus 457 g~lki~Dfg~~~vf~~~~e~---~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~ 533 (601)
T KOG0590|consen 457 GILKIIDFGAASVFRYPWEK---NIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDN 533 (601)
T ss_pred CceEEeecCcceeeccCcch---hhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCcccccccccc
Confidence 99999999998764322111 1122345789999999999999999986 8999999999999999999854322211
Q ss_pred HHHHHHHHHhhcCccccccccccCCCCC--HHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 735 LVKRVHEFEARKRPLAELVDLSLNGEYN--HKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 735 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~--~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
... .. ...... . ...+... ...-.+...++.+.++.||.+|-||.+|++
T Consensus 534 ~~~---~~-~~~~~~-~----~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 534 SFK---TN-NYSDQR-N----IFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred chh---hh-cccccc-c----cccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 100 00 000000 0 0001000 011123455666889999999999999985
No 337
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=3.4e-36 Score=327.09 Aligned_cols=258 Identities=22% Similarity=0.297 Sum_probs=196.4
Q ss_pred hCcCcCCcccccCCcEEEEEEEC-CCc--EEEEEEecCCCChhHHHHHHHHHHHHHhc-cCCCceeEEEEEeeCCeEEEE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLD-NHQ--YVLVKRLGMSKCPALRTRFSNELQNLARL-RHRNLVQLCGWCTEQGEMLVI 588 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~-~~~--~vavK~~~~~~~~~~~~~f~~E~~~l~~l-~HpNiv~l~g~~~~~~~~~lv 588 (834)
++|...+.||+|+||.||+|... ++. .+++|.+...........|.+|+.++.++ +||||+++++++.+.+..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 46677788999999999999864 343 46788776544445557889999999999 899999999999999999999
Q ss_pred EeccCCCchhhhhhcCCCC----------CCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCc
Q 003278 589 YDYSATRILSHLLFHNNHR----------IGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNP 658 (834)
Q Consensus 589 ~Ey~~~g~L~~~l~~~~~~----------~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ 658 (834)
|||+++|+|.+++...... .....+++..++.++.|++.||+|||+ .+|+||||||+|||+++++.+
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEecCCCcE
Confidence 9999999999998754311 112357899999999999999999996 699999999999999999999
Q ss_pred eEeeeeeccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHH
Q 003278 659 RLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVK 737 (834)
Q Consensus 659 ki~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~ 737 (834)
||+|||++...... .......++..|+|||++.+..++.++|||||||++|||+| |..|+....... ...
T Consensus 164 kl~dfg~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~ 234 (303)
T cd05088 164 KIADFGLSRGQEVY--------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-LYE 234 (303)
T ss_pred EeCccccCcccchh--------hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHH-HHH
Confidence 99999998632110 00111234678999999988889999999999999999998 988885432221 111
Q ss_pred HHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHcc
Q 003278 738 RVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDG 796 (834)
Q Consensus 738 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~ 796 (834)
... . .. ........ .. .+.+++.+||+.+|++|||+.++++.|+.
T Consensus 235 ~~~---~--~~-----~~~~~~~~-~~---~~~~li~~~l~~~p~~Rp~~~~il~~l~~ 279 (303)
T cd05088 235 KLP---Q--GY-----RLEKPLNC-DD---EVYDLMRQCWREKPYERPSFAQILVSLNR 279 (303)
T ss_pred HHh---c--CC-----cCCCCCCC-CH---HHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 110 0 00 00001111 12 35567779999999999999999998864
No 338
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.2e-37 Score=338.93 Aligned_cols=243 Identities=22% Similarity=0.372 Sum_probs=192.6
Q ss_pred CcccccCCcEEEEEEEC-CCcEEE---EEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCe--EEEEEecc
Q 003278 519 QRVAEMDFGTAYQGFLD-NHQYVL---VKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGE--MLVIYDYS 592 (834)
Q Consensus 519 ~~ig~g~~g~vy~~~~~-~~~~va---vK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~--~~lv~Ey~ 592 (834)
..||+|.|-+||||... .|..|| ||.-+....+...++|..|+.+|+.|+|||||++|.++.+... +-+|.|.+
T Consensus 46 evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~ 125 (632)
T KOG0584|consen 46 EVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELF 125 (632)
T ss_pred hhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecc
Confidence 35899999999999863 355565 3433345667777999999999999999999999998876544 78899999
Q ss_pred CCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCC-CCceEeeeeecccccc
Q 003278 593 ATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPD-MNPRLGSFALAEFLTR 671 (834)
Q Consensus 593 ~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~-~~~ki~DfGla~~~~~ 671 (834)
..|+|..|+.+..+ ++-.....+++||++||.|||++ .+||||||||..||+|+.+ |.+||+|+|||..+..
T Consensus 126 TSGtLr~Y~kk~~~------vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~ 198 (632)
T KOG0584|consen 126 TSGTLREYRKKHRR------VNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK 198 (632)
T ss_pred cCCcHHHHHHHhcc------CCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhc
Confidence 99999999986543 45556678999999999999987 6899999999999999864 8999999999987532
Q ss_pred CCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCcccc
Q 003278 672 NDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAE 751 (834)
Q Consensus 672 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (834)
+...++.|||.+||||++. ..|++.+||||||++++||+|+..|+..-.....+.+.+..+. ....+..
T Consensus 199 ---------s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGi-KP~sl~k 267 (632)
T KOG0584|consen 199 ---------SHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGI-KPAALSK 267 (632)
T ss_pred ---------cccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCC-CHHHhhc
Confidence 2234589999999999997 7899999999999999999999999875444444444433221 1111222
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 752 LVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 752 ~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
+ ...++.++|+ .|+.. .++|||+.|++.
T Consensus 268 V---------~dPevr~fIe---kCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 268 V---------KDPEVREFIE---KCLAT-KSERLSAKELLK 295 (632)
T ss_pred c---------CCHHHHHHHH---HHhcC-chhccCHHHHhh
Confidence 2 2346666665 89999 999999999985
No 339
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=4.6e-36 Score=318.83 Aligned_cols=253 Identities=21% Similarity=0.341 Sum_probs=196.4
Q ss_pred hCcCcCCcccccCCcEEEEEEECCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEecc
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYS 592 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~ 592 (834)
+.|...++||+|+||.||+|...+...||+|.+..... ..++|.+|++++++++||||+++++++.+ +..++||||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~ 82 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 82 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc--CHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcC
Confidence 34666788999999999999987777899999874332 23578999999999999999999998754 5578999999
Q ss_pred CCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccC
Q 003278 593 ATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRN 672 (834)
Q Consensus 593 ~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~ 672 (834)
++|+|.+++.... ...++|..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++.+...
T Consensus 83 ~~~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~ 155 (262)
T cd05071 83 SKGSLLDFLKGEM----GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 155 (262)
T ss_pred CCCcHHHHHhhcc----ccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcccEEEcCCCcEEeccCCceeecccc
Confidence 9999999986432 1247899999999999999999996 68999999999999999999999999999765432
Q ss_pred CCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcCcccc
Q 003278 673 DHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRPLAE 751 (834)
Q Consensus 673 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (834)
.. .......|+..|+|||++.++.++.++|||||||++|||+| |..|+....+... .... ... ...
T Consensus 156 ~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~-~~~~---~~~-~~~-- 222 (262)
T cd05071 156 EY------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV-LDQV---ERG-YRM-- 222 (262)
T ss_pred cc------ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHH-HHHH---hcC-CCC--
Confidence 21 11112346778999999998999999999999999999999 7777754433221 1111 000 000
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHcc
Q 003278 752 LVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDG 796 (834)
Q Consensus 752 ~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~ 796 (834)
... ......+.+++.+||+.+|++|||+.++.+.|+.
T Consensus 223 ----~~~----~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~ 259 (262)
T cd05071 223 ----PCP----PECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 259 (262)
T ss_pred ----CCc----cccCHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence 001 1122345677789999999999999999999865
No 340
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.9e-36 Score=335.27 Aligned_cols=194 Identities=27% Similarity=0.409 Sum_probs=165.7
Q ss_pred hhcCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEE
Q 003278 108 IGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVY 187 (834)
Q Consensus 108 ~~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 187 (834)
....+|+..+.||+|+||.||+|....++..||+|..... ....|+.++++++|||||++++++...+..++||
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 136 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVL 136 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEE
Confidence 4556899999999999999999999888999999975432 2356899999999999999999999999999999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhh
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARW 267 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 267 (834)
||+. |+|.+++... ..+++|..+..|+.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 137 e~~~-~~l~~~l~~~------~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~ 206 (357)
T PHA03209 137 PHYS-SDLYTYLTKR------SRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQF 206 (357)
T ss_pred EccC-CcHHHHHHhc------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccccc
Confidence 9995 6888887543 24689999999999999999999986 999999999999999999999999999874
Q ss_pred hhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccC
Q 003278 268 LEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAV 335 (834)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~ 335 (834)
.... .......||+.|+|||++... .++.++|||||||++|||+++..++
T Consensus 207 ~~~~-----------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 207 PVVA-----------------PAFLGLAGTVETNAPEVLARD-KYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred cccC-----------------cccccccccccccCCeecCCC-CCCchhhHHHHHHHHHHHHHcCCcc
Confidence 2111 012345699999999998654 5799999999999999999976654
No 341
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=5.6e-36 Score=316.78 Aligned_cols=251 Identities=20% Similarity=0.316 Sum_probs=195.7
Q ss_pred CcccccCCcEEEEEEECC--C--cEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEeccCC
Q 003278 519 QRVAEMDFGTAYQGFLDN--H--QYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSAT 594 (834)
Q Consensus 519 ~~ig~g~~g~vy~~~~~~--~--~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~~ 594 (834)
+.||+|+||.||+|...+ + ..||||.+.........+.|.+|++++++++|||||++++++.+ ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 358999999999998643 3 35899998765544556789999999999999999999999988 889999999999
Q ss_pred CchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCC
Q 003278 595 RILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674 (834)
Q Consensus 595 g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~ 674 (834)
|+|.+++..... ..++|.....++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++.+.....
T Consensus 80 ~~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 152 (257)
T cd05040 80 GSLLDRLRKDAL----GHFLISTLCDYAVQIANGMRYLES---KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNED 152 (257)
T ss_pred CcHHHHHHhccc----ccCcHHHHHHHHHHHHHHHHHHHh---CCccccccCcccEEEecCCEEEecccccccccccccc
Confidence 999999876431 348899999999999999999996 6999999999999999999999999999987643221
Q ss_pred CCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcCcccccc
Q 003278 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRPLAELV 753 (834)
Q Consensus 675 ~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (834)
.. .......|+.+|+|||++.+..++.++|||||||++|||+| |..|+....... ...... .. .. ...
T Consensus 153 ~~----~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-~~~~~~---~~-~~--~~~ 221 (257)
T cd05040 153 HY----VMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ-ILKKID---KE-GE--RLE 221 (257)
T ss_pred ce----ecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHH---hc-CC--cCC
Confidence 10 01123467889999999998899999999999999999999 999885432221 111111 10 10 000
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHc
Q 003278 754 DLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795 (834)
Q Consensus 754 d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~ 795 (834)
.... .+ ..+..++.+||+.+|++|||+.+|++.|.
T Consensus 222 ---~~~~-~~---~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 222 ---RPEA-CP---QDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred ---CCcc-CC---HHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 0111 12 24556667999999999999999999874
No 342
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=3.3e-36 Score=321.35 Aligned_cols=253 Identities=19% Similarity=0.320 Sum_probs=194.4
Q ss_pred HHhhCcCcCCcccccCCcEEEEEEEC-CCcEEEEEEecCCCChhHHHHHHHHHHHHHhc-cCCCceeEEEEEeeC-----
Q 003278 510 SATNNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSKCPALRTRFSNELQNLARL-RHRNLVQLCGWCTEQ----- 582 (834)
Q Consensus 510 ~at~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l-~HpNiv~l~g~~~~~----- 582 (834)
.+++.|...+.||+|+||.||+|... +++.||+|.+..... ....+.+|+.++.++ +||||+++++++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~--~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD--EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 80 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc--cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence 46677888889999999999999864 578899999865432 235688899999999 799999999998753
Q ss_pred -CeEEEEEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEe
Q 003278 583 -GEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLG 661 (834)
Q Consensus 583 -~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~ 661 (834)
...+++|||+++|+|.+++.... ...++|.....++.|++.||+|||+ .+|+||||||+||++++++.+||+
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~----~~~l~~~~~~~~~~qi~~~l~~LH~---~~ivh~dl~~~nili~~~~~~~l~ 153 (272)
T cd06637 81 DDQLWLVMEFCGAGSVTDLIKNTK----GNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLV 153 (272)
T ss_pred CcEEEEEEEcCCCCcHHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHEEECCCCCEEEc
Confidence 46899999999999999987532 1247888899999999999999997 689999999999999999999999
Q ss_pred eeeeccccccCCCCCcccccCccccccccCccchhccc-----cCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHH
Q 003278 662 SFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIE-----SGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLV 736 (834)
Q Consensus 662 DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~-----~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~ 736 (834)
|||++..+.... .......||..|+|||++. ...++.++|||||||++|||+||+.|+....+.....
T Consensus 154 Dfg~~~~~~~~~-------~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~ 226 (272)
T cd06637 154 DFGVSAQLDRTV-------GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF 226 (272)
T ss_pred cCCCceeccccc-------ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHH
Confidence 999997643211 1123457999999999986 3468889999999999999999999986433221111
Q ss_pred HHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 737 KRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 737 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
.....+.....+ ..... .+.+++.+||..+|.+|||+.+|++
T Consensus 227 ------~~~~~~~~~~~~-----~~~~~---~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 227 ------LIPRNPAPRLKS-----KKWSK---KFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred ------HHhcCCCCCCCC-----CCcCH---HHHHHHHHHcCCChhhCCCHHHHhh
Confidence 011111111111 11122 3456667999999999999999874
No 343
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.4e-36 Score=343.56 Aligned_cols=194 Identities=28% Similarity=0.340 Sum_probs=165.5
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEcc
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYM 190 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 190 (834)
.+|...+.||+|+||.||+|.+..+++.||||... ...+.+|+.+|++++|+|||++++++...+..++||||+
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~ 242 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKY 242 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEcc
Confidence 36888899999999999999999899999999642 234678999999999999999999999999999999999
Q ss_pred CCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhh
Q 003278 191 PNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEH 270 (834)
Q Consensus 191 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~ 270 (834)
. ++|..++... ...++|.+++.|+.|+++||.|||+. +||||||||+|||++.++.+||+|||+++.+..
T Consensus 243 ~-~~L~~~l~~~------~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~ 312 (461)
T PHA03211 243 R-SDLYTYLGAR------LRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARG 312 (461)
T ss_pred C-CCHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceeccc
Confidence 5 7888887543 23689999999999999999999985 999999999999999999999999999986432
Q ss_pred hhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccC
Q 003278 271 ELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAV 335 (834)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~ 335 (834)
... ........||+.|+|||++... .++.++|||||||+||||++|..++
T Consensus 313 ~~~--------------~~~~~~~~GT~~Y~APE~~~~~-~~~~~sDvwSlGviL~El~~g~~~l 362 (461)
T PHA03211 313 SWS--------------TPFHYGIAGTVDTNAPEVLAGD-PYTPSVDIWSAGLVIFEAAVHTASL 362 (461)
T ss_pred ccc--------------cccccccCCCcCCcCHHHHcCC-CCCchHHHHHHHHHHHHHHHcCCCc
Confidence 100 0012345699999999998654 6799999999999999999998765
No 344
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.6e-36 Score=326.08 Aligned_cols=266 Identities=24% Similarity=0.384 Sum_probs=203.2
Q ss_pred hcCCCCCCCeeeccCCeEEEEEEEC-------CCCeEEEEEEecccC-hhhHHHHHHHHHHHHhC-CCCceeeEeeeEEe
Q 003278 109 GSNGFDEDEVLGSGGFGKVYRAVLP-------SDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHL-RHRNLVRLRGWCVH 179 (834)
Q Consensus 109 ~t~~f~~~~~LG~G~fG~Vy~~~~~-------~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~ 179 (834)
..++|...+.||+|+||.||+|... .++..||+|.+.... ....+.+.+|+.+++.+ +||||+++++++..
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 3456888899999999999999752 235689999886432 34456789999999999 89999999999999
Q ss_pred CCEEEEEEEccCCCCHhHHHhcCCCcc---------ccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceE
Q 003278 180 EDQLLLVYDYMPNRSLDRVLFRRPENL---------EAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVM 250 (834)
Q Consensus 180 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~---------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIL 250 (834)
.+..++||||+++|+|.+++....... .....++|.++..++.|+++||.|||+. +|+||||||+|||
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nil 169 (304)
T cd05101 93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNVL 169 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceEE
Confidence 999999999999999999997642210 0124689999999999999999999985 9999999999999
Q ss_pred ECCCCceEEeeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh
Q 003278 251 LDSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS 330 (834)
Q Consensus 251 ld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt 330 (834)
++.++.+||+|||+++.+...... .......+++.|+|||.+... .++.++|||||||++|||+|
T Consensus 170 i~~~~~~kl~D~g~~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~ 234 (304)
T cd05101 170 VTENNVMKIADFGLARDVNNIDYY--------------KKTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFT 234 (304)
T ss_pred EcCCCcEEECCCccceeccccccc--------------ccccCCCCCceeeCchhhccC-CCCchhhHHHHHHHHHHHHc
Confidence 999999999999999865321100 012223467889999988654 57899999999999999998
Q ss_pred -CCccCCCCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcCC
Q 003278 331 -GRRAVDLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGSY 409 (834)
Q Consensus 331 -G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~~ 409 (834)
|..|+.... ...+...+ ..+..... .......+..++..||+.+|.+||+|.+|++.|..+.
T Consensus 235 ~g~~p~~~~~------~~~~~~~~-~~~~~~~~----------~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~ 297 (304)
T cd05101 235 LGGSPYPGIP------VEELFKLL-KEGHRMDK----------PANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRIL 297 (304)
T ss_pred CCCCCcccCC------HHHHHHHH-HcCCcCCC----------CCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHH
Confidence 777764321 12222222 11111110 0011246788999999999999999999999987643
No 345
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.8e-36 Score=348.95 Aligned_cols=272 Identities=20% Similarity=0.308 Sum_probs=196.3
Q ss_pred cHHHHHhhcCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCC------CceeeEee
Q 003278 102 SYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRH------RNLVRLRG 175 (834)
Q Consensus 102 ~~~el~~~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H------~nIv~l~g 175 (834)
..+++...+++|+..++||+|+||+||+|.+..++..||||+++... ...+.+..|+.++..++| ++|+++++
T Consensus 120 ~~~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~ 198 (467)
T PTZ00284 120 LGEDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQR 198 (467)
T ss_pred cCCccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEE
Confidence 34556667889999999999999999999998889999999986432 233455667777776655 45899999
Q ss_pred eEEeC-CEEEEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCC
Q 003278 176 WCVHE-DQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQ 254 (834)
Q Consensus 176 ~~~~~-~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~ 254 (834)
+|... +..++|||++ +++|.+++... ..+++..+..|+.||+.||.|||+. .+||||||||+|||++.+
T Consensus 199 ~~~~~~~~~~iv~~~~-g~~l~~~l~~~-------~~l~~~~~~~i~~qi~~aL~yLH~~--~gIiHrDlKP~NILl~~~ 268 (467)
T PTZ00284 199 YFQNETGHMCIVMPKY-GPCLLDWIMKH-------GPFSHRHLAQIIFQTGVALDYFHTE--LHLMHTDLKPENILMETS 268 (467)
T ss_pred EEEcCCceEEEEEecc-CCCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhc--CCeecCCCCHHHEEEecC
Confidence 98765 4789999988 67888887543 3689999999999999999999973 489999999999999876
Q ss_pred C----------------ceEEeeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccce
Q 003278 255 Y----------------NARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDV 318 (834)
Q Consensus 255 ~----------------~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV 318 (834)
+ .+||+|||++..... ..+...||+.|||||++... .++.++||
T Consensus 269 ~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~-------------------~~~~~~gt~~Y~APE~~~~~-~~~~~~Di 328 (467)
T PTZ00284 269 DTVVDPVTNRALPPDPCRVRICDLGGCCDERH-------------------SRTAIVSTRHYRSPEVVLGL-GWMYSTDM 328 (467)
T ss_pred CcccccccccccCCCCceEEECCCCccccCcc-------------------ccccccCCccccCcHHhhcC-CCCcHHHH
Confidence 5 499999998753110 13456799999999998654 67999999
Q ss_pred eehhhHHHHHHhCCccCCCCCCCccchHH---------HHHHH--------Hhh-cCccccccccc----cCCC--CCCH
Q 003278 319 FSFGIVVLEVVSGRRAVDLTYPDDQIILL---------DWIRR--------LSD-EGKVLQAGDNR----LSDG--SYKL 374 (834)
Q Consensus 319 ~SfGvvl~ElltG~~p~~~~~~~~~~~l~---------~~~~~--------~~~-~~~~~~~~d~~----l~~~--~~~~ 374 (834)
|||||++|||+||+.||+.....+...++ .|... +.. .+.+....++. +... ....
T Consensus 329 wSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (467)
T PTZ00284 329 WSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREV 408 (467)
T ss_pred HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhh
Confidence 99999999999999999754322211111 11100 000 00000000000 0000 0001
Q ss_pred HHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 375 CDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 375 ~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
.....+.+|+..||+.||.+||++.|+++.
T Consensus 409 ~~~~~~~dli~~mL~~dP~~R~ta~e~L~H 438 (467)
T PTZ00284 409 IRDDLLCDLIYGLLHYDRQKRLNARQMTTH 438 (467)
T ss_pred hchHHHHHHHHHhCCcChhhCCCHHHHhcC
Confidence 112456789999999999999999999873
No 346
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=7.5e-36 Score=316.79 Aligned_cols=254 Identities=23% Similarity=0.360 Sum_probs=199.0
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC-----hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG-----ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLL 185 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~-----~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 185 (834)
++|...+.||+|+||.||+|....++..||+|.+.... ....+.+.+|+.++++++||||+++++++...+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 57999999999999999999998889999999875431 1223568899999999999999999999999999999
Q ss_pred EEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccch
Q 003278 186 VYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLA 265 (834)
Q Consensus 186 V~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 265 (834)
||||+++++|.+++... ..+++.....++.|++.||.|||+. +|+||||||+||++++++.++|+|||++
T Consensus 82 v~e~~~~~~l~~~~~~~-------~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~ 151 (263)
T cd06625 82 FMEYMPGGSVKDQLKAY-------GALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGAS 151 (263)
T ss_pred EEEECCCCcHHHHHHHh-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccc
Confidence 99999999999988643 3578889999999999999999985 9999999999999999999999999998
Q ss_pred hhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccch
Q 003278 266 RWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII 345 (834)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~ 345 (834)
+.+..... .........|+..|+|||.+... .++.++|||||||++|||++|+.||...... .
T Consensus 152 ~~~~~~~~-------------~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~ 214 (263)
T cd06625 152 KRLQTICS-------------SGTGMKSVTGTPYWMSPEVISGE-GYGRKADVWSVGCTVVEMLTEKPPWAEFEAM---A 214 (263)
T ss_pred eecccccc-------------ccccccCCCcCccccCcceeccC-CCCchhhhHHHHHHHHHHHhCCCCccccchH---H
Confidence 75422100 00001234588999999998754 5789999999999999999999998542111 1
Q ss_pred HHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 346 LLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 346 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
.. ......... ..+. .. ....+.++...||..+|.+||++.++++.
T Consensus 215 ~~---~~~~~~~~~-----~~~~-~~----~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 215 AI---FKIATQPTN-----PQLP-SH----VSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred HH---HHHhccCCC-----CCCC-cc----CCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 11 111111100 0111 11 12357789999999999999999999864
No 347
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=5.3e-36 Score=316.44 Aligned_cols=250 Identities=22% Similarity=0.362 Sum_probs=198.4
Q ss_pred CcCcCCcccccCCcEEEEEEEC-CCcEEEEEEecCCC-ChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEec
Q 003278 514 NFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSK-CPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY 591 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~-~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey 591 (834)
+|...+.||+|+||.||+|... ++..|++|.+.... .......+.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 3566678999999999999864 57889999886432 334567899999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccccc
Q 003278 592 SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTR 671 (834)
Q Consensus 592 ~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~ 671 (834)
+++++|.+++.... ...+++.....++.|++.||.|||+ .+|+||||||+||+++.++.+|++|||+++.+..
T Consensus 81 ~~~~~L~~~l~~~~----~~~~~~~~~~~i~~~l~~al~~lH~---~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~ 153 (256)
T cd08529 81 AENGDLHKLLKMQR----GRPLPEDQVWRFFIQILLGLAHLHS---KKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSD 153 (256)
T ss_pred CCCCcHHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEeCCCCEEEcccccceeccC
Confidence 99999999987542 1248888899999999999999996 6999999999999999999999999999876543
Q ss_pred CCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCcccc
Q 003278 672 NDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAE 751 (834)
Q Consensus 672 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (834)
.. .......|++.|+|||++.++.++.++|||||||++|||+||+.|+..... ........ . ....
T Consensus 154 ~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~~~---~--~~~~- 219 (256)
T cd08529 154 NT-------NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ-GALILKII---R--GVFP- 219 (256)
T ss_pred cc-------chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHH---c--CCCC-
Confidence 21 112235688999999999999999999999999999999999999864432 22111111 0 1110
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 752 LVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 752 ~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
.+...++ ..+.+++.+||+.+|++||+|.+|++
T Consensus 220 ----~~~~~~~----~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 220 ----PVSQMYS----QQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred ----CCccccC----HHHHHHHHHHccCCcccCcCHHHHhh
Confidence 1111111 24556667999999999999999985
No 348
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2.4e-36 Score=337.14 Aligned_cols=205 Identities=17% Similarity=0.168 Sum_probs=171.4
Q ss_pred HHhhCcCcCCcccccCCcEEEEEEEC-CCcEEEEEEecCCC--ChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEE
Q 003278 510 SATNNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSK--CPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEML 586 (834)
Q Consensus 510 ~at~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~ 586 (834)
...++|...+.||+|+||.||++... ++..+|+|.+.... .......+.+|+.+++.++|||||++++++.+.+..+
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~ 119 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLY 119 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE
Confidence 34577888899999999999999965 57889999885321 1223356889999999999999999999999999999
Q ss_pred EEEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeec
Q 003278 587 VIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALA 666 (834)
Q Consensus 587 lv~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla 666 (834)
+||||+++|+|.+++... .+++.....++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||++
T Consensus 120 lv~Ey~~gg~L~~~l~~~-------~~~~~~~~~~~~qil~aL~~LH~---~~IvHrDLKp~NILl~~~~~~kL~DFG~a 189 (370)
T cd05621 120 MVMEYMPGGDLVNLMSNY-------DVPEKWAKFYTAEVVLALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTC 189 (370)
T ss_pred EEEcCCCCCcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEEecccc
Confidence 999999999999988532 26677788899999999999996 69999999999999999999999999999
Q ss_pred cccccCCCCCcccccCccccccccCccchhccccC----CCCccCcchhhHHHHHHHHhCCCccCCCC
Q 003278 667 EFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESG----EATSMADVYSFGVVVLEVVTGQMAVDFRL 730 (834)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~----~~~~k~DV~SfGvvl~E~~tG~~p~~~~~ 730 (834)
..+..... ....+..||+.|||||++.+. .++.++|||||||+||||+||+.||....
T Consensus 190 ~~~~~~~~------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~ 251 (370)
T cd05621 190 MKMDETGM------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS 251 (370)
T ss_pred eecccCCc------eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCC
Confidence 76532211 112346799999999998653 37889999999999999999999997543
No 349
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=3.6e-36 Score=317.77 Aligned_cols=250 Identities=26% Similarity=0.399 Sum_probs=200.5
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEcc
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYM 190 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 190 (834)
++|+..+.||+|+||.||+|.+..++..||+|.+..... .+.+.+|+.++++++||||+++++++...+..++++||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 678889999999999999999988899999999865432 678999999999999999999999999999999999999
Q ss_pred CCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhh
Q 003278 191 PNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEH 270 (834)
Q Consensus 191 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~ 270 (834)
++++|.+++... ...++|.....++.|+++||.|||+. +|+||||+|+||+++.++.+||+|||++..+..
T Consensus 81 ~~~~L~~~l~~~------~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~ 151 (256)
T cd06612 81 GAGSVSDIMKIT------NKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTD 151 (256)
T ss_pred CCCcHHHHHHhC------ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhccc
Confidence 999999998543 24689999999999999999999985 999999999999999999999999999876432
Q ss_pred hhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHH
Q 003278 271 ELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWI 350 (834)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~ 350 (834)
.. .......|+..|+|||++... .++.++|||||||++|||+||+.|+....+..... .
T Consensus 152 ~~----------------~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~--~-- 210 (256)
T cd06612 152 TM----------------AKRNTVIGTPFWMAPEVIQEI-GYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF--M-- 210 (256)
T ss_pred Cc----------------cccccccCCccccCHHHHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh--h--
Confidence 11 012234588999999988654 67899999999999999999999986432221100 0
Q ss_pred HHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHH
Q 003278 351 RRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIE 403 (834)
Q Consensus 351 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~ 403 (834)
......+.+. ....-...+.+++..||+.+|.+||++.+|++
T Consensus 211 --------~~~~~~~~~~---~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 211 --------IPNKPPPTLS---DPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred --------hccCCCCCCC---chhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 0000000110 00001135788999999999999999999986
No 350
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.9e-36 Score=339.52 Aligned_cols=209 Identities=18% Similarity=0.174 Sum_probs=171.1
Q ss_pred CcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCC--ChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEe
Q 003278 514 NFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSK--CPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYD 590 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~E 590 (834)
+|...+.||+|+||.||++.. .++..||||.+.... .....+.+.+|++++.+++|||||++++++.+.+..++|||
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E 81 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIME 81 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEe
Confidence 577778999999999999985 568899999885422 22334678899999999999999999999999999999999
Q ss_pred ccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccc
Q 003278 591 YSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLT 670 (834)
Q Consensus 591 y~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~ 670 (834)
|+++|+|.+++.... .+++.....++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 82 ~~~gg~L~~~l~~~~------~~~~~~~~~~~~ql~~aL~~LH~---~givHrDlkp~NIll~~~~~~kl~DfGla~~~~ 152 (377)
T cd05629 82 FLPGGDLMTMLIKYD------TFSEDVTRFYMAECVLAIEAVHK---LGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFH 152 (377)
T ss_pred CCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEEeecccccccc
Confidence 999999999886432 36777778899999999999996 699999999999999999999999999996322
Q ss_pred cCCCCC----------ccc------------------------------ccCccccccccCccchhccccCCCCccCcch
Q 003278 671 RNDHGH----------RKA------------------------------TSGNRSVRGIFGYMSPEYIESGEATSMADVY 710 (834)
Q Consensus 671 ~~~~~~----------~~~------------------------------~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~ 710 (834)
...... ... .....+.+||+.|||||++.+..++.++|||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw 232 (377)
T cd05629 153 KQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWW 232 (377)
T ss_pred cccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeE
Confidence 110000 000 0001135799999999999988999999999
Q ss_pred hhHHHHHHHHhCCCccCCCCC
Q 003278 711 SFGVVVLEVVTGQMAVDFRLP 731 (834)
Q Consensus 711 SfGvvl~E~~tG~~p~~~~~~ 731 (834)
||||+||||+||..||....+
T Consensus 233 SlGvil~elltG~~Pf~~~~~ 253 (377)
T cd05629 233 SLGAIMFECLIGWPPFCSENS 253 (377)
T ss_pred ecchhhhhhhcCCCCCCCCCH
Confidence 999999999999999965443
No 351
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.4e-36 Score=323.71 Aligned_cols=254 Identities=18% Similarity=0.265 Sum_probs=198.8
Q ss_pred CcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEecc
Q 003278 514 NFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYS 592 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~ 592 (834)
+|...+.||+|+||+||++.. .++..||+|.+.....+...+.|.+|+++++.++||||+++++++...+..++||||+
T Consensus 6 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (284)
T cd06620 6 DLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFM 85 (284)
T ss_pred HHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecC
Confidence 455567899999999999985 4588899998876555556678999999999999999999999999999999999999
Q ss_pred CCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccC
Q 003278 593 ATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRN 672 (834)
Q Consensus 593 ~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~ 672 (834)
++++|..++...+ .+++.....++.+++.||.|||+. .+|+||||||+||++++++.++|+|||++......
T Consensus 86 ~~~~L~~~~~~~~------~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~ 157 (284)
T cd06620 86 DCGSLDRIYKKGG------PIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS 157 (284)
T ss_pred CCCCHHHHHHhcc------CCCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHHEEECCCCcEEEccCCcccchhhh
Confidence 9999998875432 378888999999999999999963 57999999999999999999999999998643211
Q ss_pred CCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchh-------HHHHHHHHHhh
Q 003278 673 DHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGL-------LVKRVHEFEAR 745 (834)
Q Consensus 673 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~-------~~~~~~~~~~~ 745 (834)
......||..|+|||++.++.++.++|||||||++|||+||+.|+....+... +..........
T Consensus 158 ---------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (284)
T cd06620 158 ---------IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQE 228 (284)
T ss_pred ---------ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhc
Confidence 11235789999999999888999999999999999999999999875433210 11111111100
Q ss_pred cCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHH
Q 003278 746 KRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSIL 794 (834)
Q Consensus 746 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L 794 (834)
. .+.+.....+ ..+..++.+||+.||++|||+.+|++..
T Consensus 229 ~-------~~~~~~~~~~---~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 229 P-------PPRLPSSDFP---EDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred c-------CCCCCchhcC---HHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 0 0111111111 2355666799999999999999999864
No 352
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=7.5e-36 Score=316.03 Aligned_cols=250 Identities=27% Similarity=0.418 Sum_probs=194.6
Q ss_pred CeeeccCCeEEEEEEECCCC---eEEEEEEecccCh-hhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEccCC
Q 003278 117 EVLGSGGFGKVYRAVLPSDG---TVVAVKCLAEKGE-RFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPN 192 (834)
Q Consensus 117 ~~LG~G~fG~Vy~~~~~~~g---~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 192 (834)
++||+|+||.||+|.+...+ ..||+|.+..... ...+.+.+|+.++++++|||||++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 47999999999999875544 7899999875433 35567999999999999999999999876 4568999999999
Q ss_pred CCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhh
Q 003278 193 RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHEL 272 (834)
Q Consensus 193 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~ 272 (834)
|+|.+++... ..++|..+..++.|++.||+|||+. +++||||||+|||++.++.+||+|||+++.+....
T Consensus 80 ~~L~~~l~~~-------~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~ 149 (257)
T cd05060 80 GPLLKYLKKR-------REIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGS 149 (257)
T ss_pred CcHHHHHHhC-------CCCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCC
Confidence 9999999653 2578999999999999999999985 89999999999999999999999999998653221
Q ss_pred hhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCccchHHHHHH
Q 003278 273 QYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQIILLDWIR 351 (834)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~~l~~~~~ 351 (834)
.. ........++..|+|||.+..+ .++.++|||||||++|||+| |+.|+..... ..+..++.
T Consensus 150 ~~-------------~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~---~~~~~~~~ 212 (257)
T cd05060 150 DY-------------YRATTAGRWPLKWYAPECINYG-KFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG---AEVIAMLE 212 (257)
T ss_pred cc-------------cccccCccccccccCHHHhcCC-CCCccchHHHHHHHHHHHHcCCCCCcccCCH---HHHHHHHH
Confidence 10 0001122356789999988654 67899999999999999998 9998864321 12222222
Q ss_pred HHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcC
Q 003278 352 RLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGS 408 (834)
Q Consensus 352 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~ 408 (834)
.+...... ... ...+.+++.+||+.+|.+||++.+|++.|...
T Consensus 213 ----~~~~~~~~------~~~----~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 213 ----SGERLPRP------EEC----PQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred ----cCCcCCCC------CCC----CHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 11111110 111 24678999999999999999999999999764
No 353
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=3.4e-36 Score=330.31 Aligned_cols=242 Identities=17% Similarity=0.194 Sum_probs=187.8
Q ss_pred CcCcCCcccccCCcEEEEEEEC-CCcEEEEEEecCCC--ChhHHHHHHHHHHHHHhccCC-CceeEEEEEeeCCeEEEEE
Q 003278 514 NFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSK--CPALRTRFSNELQNLARLRHR-NLVQLCGWCTEQGEMLVIY 589 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~f~~E~~~l~~l~Hp-Niv~l~g~~~~~~~~~lv~ 589 (834)
+|...+.||+|+||.||+|... ++..||||.+.... .....+.+..|+.++..++|+ +|+++++++.+.+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 3566788999999999999865 46789999986432 223345688899999999775 5788999999999999999
Q ss_pred eccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccc
Q 003278 590 DYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFL 669 (834)
Q Consensus 590 Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~ 669 (834)
||+++|+|..++.... .+++.....++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++..
T Consensus 81 E~~~~g~L~~~~~~~~------~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~ 151 (324)
T cd05587 81 EYVNGGDLMYHIQQVG------KFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDAEGHIKIADFGMCKEN 151 (324)
T ss_pred cCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEEcCCCCEEEeecCcceec
Confidence 9999999998886432 37888899999999999999996 69999999999999999999999999998642
Q ss_pred ccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCcc
Q 003278 670 TRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPL 749 (834)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 749 (834)
.... .......||+.|+|||++.+..++.++|||||||++|||+||+.||....... ....+. ....
T Consensus 152 ~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~-~~~~i~---~~~~-- 218 (324)
T cd05587 152 IFGG-------KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE-LFQSIM---EHNV-- 218 (324)
T ss_pred CCCC-------CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH-HHHHHH---cCCC--
Confidence 2111 11234679999999999999999999999999999999999999987543221 111111 1110
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCh
Q 003278 750 AELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSM 787 (834)
Q Consensus 750 ~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm 787 (834)
.+....+ . .+..++.+||..||.+||+.
T Consensus 219 ------~~~~~~~-~---~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 219 ------SYPKSLS-K---EAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred ------CCCCCCC-H---HHHHHHHHHhhcCHHHcCCC
Confidence 1111122 2 34455668999999999987
No 354
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=7.9e-36 Score=314.24 Aligned_cols=247 Identities=24% Similarity=0.393 Sum_probs=193.4
Q ss_pred CeeeccCCeEEEEEEECCCCeEEEEEEecccC-hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEccCCCCH
Q 003278 117 EVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSL 195 (834)
Q Consensus 117 ~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 195 (834)
++||+|+||.||+|.. .++..||+|.+.... ......|.+|+.++++++||||++++++|...+..++||||+++|+|
T Consensus 1 ~~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 79 (250)
T cd05085 1 ELLGKGNFGEVFKGTL-KDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDF 79 (250)
T ss_pred CccCCCCCceEEEEEe-cCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcH
Confidence 4799999999999997 478899999886543 33455789999999999999999999999999999999999999999
Q ss_pred hHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhhhhh
Q 003278 196 DRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQYQ 275 (834)
Q Consensus 196 ~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~~ 275 (834)
.+++... ...++|..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++........
T Consensus 80 ~~~~~~~------~~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~-- 148 (250)
T cd05085 80 LSFLRKK------KDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY-- 148 (250)
T ss_pred HHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceecccccc--
Confidence 9988543 23578999999999999999999985 999999999999999999999999999874322110
Q ss_pred hhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCccchHHHHHHHHh
Q 003278 276 MRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQIILLDWIRRLS 354 (834)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~~l~~~~~~~~ 354 (834)
.......+++.|+|||++..+ .++.++|||||||++||++| |..||...... .... . .
T Consensus 149 -------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~---~~~~---~-~ 207 (250)
T cd05085 149 -------------SSSGLKQIPIKWTAPEALNYG-RYSSESDVWSYGILLWETFSLGVCPYPGMTNQ---QARE---Q-V 207 (250)
T ss_pred -------------ccCCCCCCcccccCHHHhccC-CCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH---HHHH---H-H
Confidence 001122356789999998655 57889999999999999999 88888532111 1111 1 1
Q ss_pred hcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhh
Q 003278 355 DEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVS 406 (834)
Q Consensus 355 ~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~ 406 (834)
..+..... .......+.+++..|++.+|++||+|.++++.|.
T Consensus 208 ~~~~~~~~----------~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 208 EKGYRMSC----------PQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HcCCCCCC----------CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 11111110 0011246889999999999999999999998874
No 355
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.9e-36 Score=327.84 Aligned_cols=251 Identities=24% Similarity=0.374 Sum_probs=200.6
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEcc
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYM 190 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 190 (834)
.+|+..+.||.|+||.||+|....+|+.||+|.+........+.+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 45888899999999999999998899999999987655555677899999999999999999999999999999999999
Q ss_pred CCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhh
Q 003278 191 PNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEH 270 (834)
Q Consensus 191 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~ 270 (834)
++++|..++.. ..++|.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++..+..
T Consensus 99 ~~~~L~~~~~~--------~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~ 167 (296)
T cd06655 99 AGGSLTDVVTE--------TCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITP 167 (296)
T ss_pred CCCcHHHHHHh--------cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhccc
Confidence 99999998843 3588999999999999999999985 999999999999999999999999999875422
Q ss_pred hhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHH
Q 003278 271 ELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWI 350 (834)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~ 350 (834)
... ......|++.|+|||.+... .++.++|||||||++|||+||+.||........ .
T Consensus 168 ~~~----------------~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~------~ 224 (296)
T cd06655 168 EQS----------------KRSTMVGTPYWMAPEVVTRK-AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA------L 224 (296)
T ss_pred ccc----------------cCCCcCCCccccCcchhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH------H
Confidence 110 01234589999999988654 578899999999999999999999865432111 1
Q ss_pred HHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 351 RRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 351 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
....... ......+ ... ...+.+++..||..+|.+||++.+++..
T Consensus 225 ~~~~~~~-~~~~~~~----~~~----~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 225 YLIATNG-TPELQNP----EKL----SPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred HHHHhcC-CcccCCc----ccC----CHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 1111110 0000000 111 1357788999999999999999999863
No 356
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-36 Score=332.61 Aligned_cols=242 Identities=17% Similarity=0.265 Sum_probs=196.1
Q ss_pred CCcccccCCcEEEEEE-ECCCcEEEEEEecCC--CChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEeccCC
Q 003278 518 SQRVAEMDFGTAYQGF-LDNHQYVLVKRLGMS--KCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSAT 594 (834)
Q Consensus 518 ~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~--~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~~ 594 (834)
++-+|.|+-|.|-.|+ ...|+.+|||.+... ..........+||.+|+-|.||||++||+++.++.++|+|.||+++
T Consensus 17 gkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~g 96 (786)
T KOG0588|consen 17 GKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVPG 96 (786)
T ss_pred cccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecCC
Confidence 4569999999999998 467999999998654 2223345678899999999999999999999999999999999999
Q ss_pred CchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCC
Q 003278 595 RILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674 (834)
Q Consensus 595 g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~ 674 (834)
|-|.++|..++ .|..+...+++.||..|+.|||. .+|+||||||+|+|||..+++||+|||+|.+-..+
T Consensus 97 GELFdylv~kG------~l~e~eaa~ff~QIi~gv~yCH~---~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g-- 165 (786)
T KOG0588|consen 97 GELFDYLVRKG------PLPEREAAHFFRQILDGVSYCHA---FNICHRDLKPENLLLDVKNNIKIADFGMASLEVPG-- 165 (786)
T ss_pred chhHHHHHhhC------CCCCHHHHHHHHHHHHHHHHHhh---hcceeccCCchhhhhhcccCEeeeccceeecccCC--
Confidence 99999998764 37888889999999999999997 68999999999999999999999999999763332
Q ss_pred CCcccccCccccccccCccchhccccCCCC-ccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCcccccc
Q 003278 675 GHRKATSGNRSVRGIFGYMSPEYIESGEAT-SMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELV 753 (834)
Q Consensus 675 ~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~-~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (834)
....+-||++.|.|||++.+.+|+ .++||||.|||||.|+||+.||+...-...+. .+.. ...++.
T Consensus 166 ------klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLl-KV~~------G~f~MP 232 (786)
T KOG0588|consen 166 ------KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLL-KVQR------GVFEMP 232 (786)
T ss_pred ------ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHH-HHHc------CcccCC
Confidence 123456999999999999999997 47999999999999999999998543333222 2221 112222
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 754 DLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 754 d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
.+-..++..|+. ++++-||+.|-|++||.+
T Consensus 233 ------s~Is~eaQdLLr---~ml~VDp~~RiT~~eI~k 262 (786)
T KOG0588|consen 233 ------SNISSEAQDLLR---RMLDVDPSTRITTEEILK 262 (786)
T ss_pred ------CcCCHHHHHHHH---HHhccCccccccHHHHhh
Confidence 112245555554 678899999999999987
No 357
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=5.7e-36 Score=319.21 Aligned_cols=256 Identities=28% Similarity=0.461 Sum_probs=199.0
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCe---EEEEEEeccc-ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEE
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGT---VVAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVY 187 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~---~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 187 (834)
+|+..+.||+|+||.||+|.+..++. .||||.+... .....+.|..|+.++++++||||+++++++...+..++||
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 46778899999999999999876654 6999998654 3445678999999999999999999999999999999999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhh
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARW 267 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 267 (834)
||+++|+|.+++... ...+++.++..++.|++.||+|||+. +++||||||+|||++.++.+||+|||+++.
T Consensus 85 e~~~~~~L~~~l~~~------~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~ 155 (269)
T cd05065 85 EFMENGALDSFLRQN------DGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRF 155 (269)
T ss_pred ecCCCCcHHHHHhhC------CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCccccc
Confidence 999999999998643 23589999999999999999999985 999999999999999999999999999876
Q ss_pred hhhhhhhhhhcccccccccccccceeee--ccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCccc
Q 003278 268 LEHELQYQMRTSSARNHQFHLAETTRIG--GTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQI 344 (834)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~ 344 (834)
+...... . ....... ++..|+|||++..+ .++.++|||||||++||+++ |..|+..... .
T Consensus 156 ~~~~~~~---------~----~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~---~ 218 (269)
T cd05065 156 LEDDTSD---------P----TYTSSLGGKIPIRWTAPEAIAYR-KFTSASDVWSYGIVMWEVMSYGERPYWDMSN---Q 218 (269)
T ss_pred cccCccc---------c----ccccccCCCcceeecCHhHhccC-cccchhhhhhhHHHHHHHhcCCCCCCCCCCH---H
Confidence 5322100 0 0011111 24679999998654 57899999999999999887 9998854321 1
Q ss_pred hHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhc
Q 003278 345 ILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSG 407 (834)
Q Consensus 345 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~ 407 (834)
....++.. ..... . .... ...+.+++..||+.+|.+||+|.+|+..|+.
T Consensus 219 ~~~~~i~~---~~~~~------~-~~~~----~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 267 (269)
T cd05065 219 DVINAIEQ---DYRLP------P-PMDC----PTALHQLMLDCWQKDRNARPKFGQIVSTLDK 267 (269)
T ss_pred HHHHHHHc---CCcCC------C-cccC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 22222211 10000 0 0111 2457889999999999999999999998764
No 358
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.8e-36 Score=327.28 Aligned_cols=264 Identities=25% Similarity=0.378 Sum_probs=201.2
Q ss_pred cCCCCCCCeeeccCCeEEEEEEECC-------CCeEEEEEEeccc-ChhhHHHHHHHHHHHHhC-CCCceeeEeeeEEeC
Q 003278 110 SNGFDEDEVLGSGGFGKVYRAVLPS-------DGTVVAVKCLAEK-GERFEKTFAAELVAVAHL-RHRNLVRLRGWCVHE 180 (834)
Q Consensus 110 t~~f~~~~~LG~G~fG~Vy~~~~~~-------~g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~ 180 (834)
.++|...+.||+|+||.||+|.... ++..+|+|.+... .......+.+|+.++.++ +||||++++++|...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 3568889999999999999998632 2357999998753 233456788899999999 799999999999999
Q ss_pred CEEEEEEEccCCCCHhHHHhcCCCcc---------ccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEE
Q 003278 181 DQLLLVYDYMPNRSLDRVLFRRPENL---------EAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVML 251 (834)
Q Consensus 181 ~~~~lV~Ey~~~gsL~~~l~~~~~~~---------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl 251 (834)
+..++||||+++|+|.+++....... .....++|.+++.++.|++.||+|||+. +++||||||+|||+
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill 173 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV 173 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHheEE
Confidence 99999999999999999997643210 1124589999999999999999999985 99999999999999
Q ss_pred CCCCceEEeeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-
Q 003278 252 DSQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS- 330 (834)
Q Consensus 252 d~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt- 330 (834)
+.++.+||+|||+++.+...... ...+...+++.|+|||.+... .++.++|||||||++|||++
T Consensus 174 ~~~~~~kL~dfg~a~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~~~ 238 (307)
T cd05098 174 TEDNVMKIADFGLARDIHHIDYY--------------KKTTNGRLPVKWMAPEALFDR-IYTHQSDVWSFGVLLWEIFTL 238 (307)
T ss_pred cCCCcEEECCCcccccccccchh--------------hccccCCCccceeChHHhccC-CCCcHHHHHHHHHHHHHHHcC
Confidence 99999999999998754321100 001122356789999988654 57899999999999999998
Q ss_pred CCccCCCCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcC
Q 003278 331 GRRAVDLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGS 408 (834)
Q Consensus 331 G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~ 408 (834)
|..|+.... .......+ ..+..... .......+.+++..||+.+|.+||+|.+|++.|...
T Consensus 239 g~~p~~~~~------~~~~~~~~-~~~~~~~~----------~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~ 299 (307)
T cd05098 239 GGSPYPGVP------VEELFKLL-KEGHRMDK----------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 299 (307)
T ss_pred CCCCCCcCC------HHHHHHHH-HcCCCCCC----------CCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 888875321 11111111 11111110 001124677899999999999999999999998764
No 359
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-38 Score=312.85 Aligned_cols=247 Identities=24% Similarity=0.408 Sum_probs=204.9
Q ss_pred CCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEccCC
Q 003278 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPN 192 (834)
Q Consensus 113 f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 192 (834)
|++..+||+|+||.|||+.++.+|..||||.+.-. ...++...|+.+|.+...|.+|++||.+.....+|+|||||.-
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence 77888999999999999999999999999987543 3356788999999999999999999999999999999999999
Q ss_pred CCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhh
Q 003278 193 RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHEL 272 (834)
Q Consensus 193 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~ 272 (834)
||..+++.-+. .+|++..+..|+...++||+|||.. .-||||||..||||+.+|.+||+|||.|-.+.+..
T Consensus 113 GSiSDI~R~R~------K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM 183 (502)
T KOG0574|consen 113 GSISDIMRARR------KPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM 183 (502)
T ss_pred CcHHHHHHHhc------CCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhhH
Confidence 99999997653 5789999999999999999999986 78999999999999999999999999998776543
Q ss_pred hhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHHHH
Q 003278 273 QYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIRR 352 (834)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~~~ 352 (834)
. ...++.|||.|||||+++.- .|..++||||+|++..||..|++|+....+-..
T Consensus 184 A----------------KRNTVIGTPFWMAPEVI~EI-GY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRA--------- 237 (502)
T KOG0574|consen 184 A----------------KRNTVIGTPFWMAPEVIEEI-GYDTKADIWSLGITAIEMAEGRPPYSDIHPMRA--------- 237 (502)
T ss_pred H----------------hhCccccCcccccHHHHHHh-ccchhhhHhhhcchhhhhhcCCCCcccccccce---------
Confidence 2 24678899999999999765 468899999999999999999999865433211
Q ss_pred HhhcCccccccccccCCCCC-CHHH-HHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 353 LSDEGKVLQAGDNRLSDGSY-KLCD-MEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 353 ~~~~~~~~~~~d~~l~~~~~-~~~~-~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
+.-+.-. . ++.+ ..+. ...+.+....||-.+|++|-+..++++.
T Consensus 238 ------IFMIPT~-P-PPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 238 ------IFMIPTK-P-PPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred ------eEeccCC-C-CCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 1111111 1 1222 2222 2457789999999999999999888764
No 360
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=8.4e-37 Score=335.98 Aligned_cols=253 Identities=17% Similarity=0.192 Sum_probs=193.7
Q ss_pred hCcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCC--ChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSK--CPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIY 589 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~ 589 (834)
++|...+.||+|+||.||++.. .++..||||.+.... .....+.|.+|+.+++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 3577778999999999999986 468899999987432 2234467889999999999999999999999999999999
Q ss_pred eccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccc
Q 003278 590 DYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFL 669 (834)
Q Consensus 590 Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~ 669 (834)
||+++|+|.+++.... ..+++.....++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||++..+
T Consensus 81 e~~~~~~L~~~l~~~~-----~~l~~~~~~~~~~qi~~aL~~lH~---~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 152 (330)
T cd05601 81 EYQPGGDLLSLLNRYE-----DQFDEDMAQFYLAELVLAIHSVHQ---MGYVHRDIKPENVLIDRTGHIKLADFGSAARL 152 (330)
T ss_pred CCCCCCCHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEcccCchHheEECCCCCEEeccCCCCeEC
Confidence 9999999999987542 247888888999999999999996 69999999999999999999999999999765
Q ss_pred ccCCCCCcccccCccccccccCccchhccc------cCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHH
Q 003278 670 TRNDHGHRKATSGNRSVRGIFGYMSPEYIE------SGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFE 743 (834)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~------~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~ 743 (834)
..... .......||+.|+|||++. ...++.++|||||||++|||+||+.||......... ..+.
T Consensus 153 ~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~-~~i~--- 222 (330)
T cd05601 153 TANKM------VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTY-NNIM--- 222 (330)
T ss_pred CCCCc------eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHH-HHHH---
Confidence 43221 0112347999999999986 466789999999999999999999998654332211 1111
Q ss_pred hhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 744 ARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 744 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
...... ...+ ... ...++.. +...|+. +|++|||+.+++.
T Consensus 223 ~~~~~~-~~~~---~~~-~~~~~~~---li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 223 NFQRFL-KFPE---DPK-VSSDFLD---LIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred cCCCcc-CCCC---CCC-CCHHHHH---HHHHHcc-ChhhCCCHHHHhC
Confidence 111100 0000 001 1233444 4446886 9999999999874
No 361
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=3e-36 Score=330.56 Aligned_cols=242 Identities=16% Similarity=0.200 Sum_probs=188.3
Q ss_pred CcCcCCcccccCCcEEEEEEEC-CCcEEEEEEecCCC--ChhHHHHHHHHHHHHHhc-cCCCceeEEEEEeeCCeEEEEE
Q 003278 514 NFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSK--CPALRTRFSNELQNLARL-RHRNLVQLCGWCTEQGEMLVIY 589 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~f~~E~~~l~~l-~HpNiv~l~g~~~~~~~~~lv~ 589 (834)
+|...+.||+|+||.||+|... ++..||||.+.... .....+.+..|..++..+ +||||+++++++.+.+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4666788999999999999865 46789999986432 122334567788888877 5899999999999999999999
Q ss_pred eccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccc
Q 003278 590 DYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFL 669 (834)
Q Consensus 590 Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~ 669 (834)
||+++|+|..++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++..
T Consensus 81 E~~~~g~L~~~~~~~~------~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~ 151 (323)
T cd05616 81 EYVNGGDLMYQIQQVG------RFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 151 (323)
T ss_pred cCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHH---CCEEecCCCHHHeEECCCCcEEEccCCCceec
Confidence 9999999998886432 37888899999999999999996 69999999999999999999999999998753
Q ss_pred ccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCcc
Q 003278 670 TRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPL 749 (834)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 749 (834)
.... .......||+.|||||++.+..++.++|||||||++|||+||+.||....+.. +...+.. ...
T Consensus 152 ~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~-~~~~i~~---~~~-- 218 (323)
T cd05616 152 MWDG-------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE-LFQSIME---HNV-- 218 (323)
T ss_pred CCCC-------CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHH-HHHHHHh---CCC--
Confidence 2111 11234679999999999999999999999999999999999999997543322 2111111 110
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCh
Q 003278 750 AELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSM 787 (834)
Q Consensus 750 ~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm 787 (834)
..+...+ . .+..++.+|++.||++|++.
T Consensus 219 ------~~p~~~s-~---~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 219 ------AYPKSMS-K---EAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred ------CCCCcCC-H---HHHHHHHHHcccCHHhcCCC
Confidence 0111122 2 34556668999999999985
No 362
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.1e-36 Score=341.59 Aligned_cols=194 Identities=22% Similarity=0.234 Sum_probs=164.6
Q ss_pred hhCcCcCCcccccCCcEEEEEEECC-CcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEe
Q 003278 512 TNNFSESQRVAEMDFGTAYQGFLDN-HQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYD 590 (834)
Q Consensus 512 t~~f~~~~~ig~g~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~E 590 (834)
..+|...+.||+|+||.||+|...+ ++.||||.... ..+.+|+++|++|+|||||++++++...+..++|||
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e 240 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY-------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLP 240 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc-------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEE
Confidence 4578888999999999999999754 67899996421 346789999999999999999999999999999999
Q ss_pred ccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccc
Q 003278 591 YSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLT 670 (834)
Q Consensus 591 y~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~ 670 (834)
|+. ++|..++.... ..++|..++.|+.|++.||+|||+ .+||||||||+||||+.++.+||+|||+++.+.
T Consensus 241 ~~~-~~L~~~l~~~~-----~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~ 311 (461)
T PHA03211 241 KYR-SDLYTYLGARL-----RPLGLAQVTAVARQLLSAIDYIHG---EGIIHRDIKTENVLVNGPEDICLGDFGAACFAR 311 (461)
T ss_pred ccC-CCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEEECcCCHHHEEECCCCCEEEcccCCceecc
Confidence 995 67777775432 248999999999999999999996 699999999999999999999999999998653
Q ss_pred cCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCcc
Q 003278 671 RNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAV 726 (834)
Q Consensus 671 ~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~ 726 (834)
.... ........||+.|||||++.+..++.++|||||||+||||++|..|+
T Consensus 312 ~~~~-----~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~l 362 (461)
T PHA03211 312 GSWS-----TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASL 362 (461)
T ss_pred cccc-----cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCc
Confidence 3211 11122467999999999999999999999999999999999988665
No 363
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=2.6e-36 Score=319.36 Aligned_cols=239 Identities=26% Similarity=0.442 Sum_probs=188.1
Q ss_pred CeeeccCCeEEEEEEECCCC----------eEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEE
Q 003278 117 EVLGSGGFGKVYRAVLPSDG----------TVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLV 186 (834)
Q Consensus 117 ~~LG~G~fG~Vy~~~~~~~g----------~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 186 (834)
+.||+|+||.||+|.+..++ ..|++|.+...... ...|.+|+.++++++||||++++|+|.. +..++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 46999999999999997666 35888877654333 6789999999999999999999999988 788999
Q ss_pred EEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCC-------ceEE
Q 003278 187 YDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQY-------NARL 259 (834)
Q Consensus 187 ~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~-------~~kl 259 (834)
|||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+|||++.++ .+||
T Consensus 79 ~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl 149 (259)
T cd05037 79 EEYVKFGPLDVFLHREK------NNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKL 149 (259)
T ss_pred EEcCCCCcHHHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEe
Confidence 99999999999987542 2688999999999999999999985 999999999999999887 7999
Q ss_pred eeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccC-CCCCcccceeehhhHHHHHHhC-CccCCC
Q 003278 260 GDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKG-SVATAKSDVFSFGIVVLEVVSG-RRAVDL 337 (834)
Q Consensus 260 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~-~~~~~ksDV~SfGvvl~ElltG-~~p~~~ 337 (834)
+|||+++.+.. .....|+..|+|||++... ..++.++|||||||++|||++| ..|+..
T Consensus 150 ~Dfg~a~~~~~--------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~ 209 (259)
T cd05037 150 SDPGIPITVLS--------------------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLST 209 (259)
T ss_pred CCCCccccccc--------------------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCccc
Confidence 99999875321 1123467789999998654 3578899999999999999995 655543
Q ss_pred CCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHh
Q 003278 338 TYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAV 405 (834)
Q Consensus 338 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l 405 (834)
..... +.... .... .+... ....+.+++..||..+|.+||++.+|++.|
T Consensus 210 ~~~~~------~~~~~-~~~~-------~~~~~-----~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 210 LSSSE------KERFY-QDQH-------RLPMP-----DCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred CCchh------HHHHH-hcCC-------CCCCC-----CchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 32111 11111 0010 00000 115688999999999999999999999876
No 364
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=3.5e-36 Score=320.57 Aligned_cols=257 Identities=28% Similarity=0.428 Sum_probs=199.7
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCC---eEEEEEEecccC-hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDG---TVVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLV 186 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g---~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 186 (834)
.+|+..+.||+|+||.||+|.+..++ ..+|+|.++... ....+.|.+|+.++.+++||||+++++++...+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 46888899999999999999875443 479999886532 33456889999999999999999999999999999999
Q ss_pred EEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchh
Q 003278 187 YDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266 (834)
Q Consensus 187 ~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 266 (834)
|||+++|+|.+++.... ..+++.++..|+.|++.||+|||+. +++||||||+|||++.++.+||+|||+++
T Consensus 84 ~e~~~~~~L~~~~~~~~------~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~ 154 (267)
T cd05066 84 TEYMENGSLDAFLRKHD------GQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSR 154 (267)
T ss_pred EEcCCCCCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCccc
Confidence 99999999999986532 3589999999999999999999985 99999999999999999999999999998
Q ss_pred hhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCccch
Q 003278 267 WLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQII 345 (834)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~~ 345 (834)
.+...... ........++..|+|||++..+ .++.++|||||||++||+++ |+.|+...... .
T Consensus 155 ~~~~~~~~-------------~~~~~~~~~~~~y~~pe~~~~~-~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~---~ 217 (267)
T cd05066 155 VLEDDPEA-------------AYTTRGGKIPIRWTAPEAIAYR-KFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ---D 217 (267)
T ss_pred ccccccce-------------eeecCCCccceeecCHhHhccC-ccCchhhhHHHHHHHHHHhcCCCCCcccCCHH---H
Confidence 65322100 0001122346789999998654 57999999999999999887 99988543211 1
Q ss_pred HHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhc
Q 003278 346 LLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSG 407 (834)
Q Consensus 346 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~ 407 (834)
...++. ++... ... .. ....+.+++..|++.+|.+||+|.++++.|..
T Consensus 218 ~~~~~~----~~~~~-----~~~-~~----~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 265 (267)
T cd05066 218 VIKAIE----EGYRL-----PAP-MD----CPAALHQLMLDCWQKDRNERPKFEQIVSILDK 265 (267)
T ss_pred HHHHHh----CCCcC-----CCC-CC----CCHHHHHHHHHHcccCchhCCCHHHHHHHHHh
Confidence 222211 11100 000 11 12457889999999999999999999998864
No 365
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=8.2e-36 Score=321.12 Aligned_cols=247 Identities=16% Similarity=0.205 Sum_probs=189.9
Q ss_pred cCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCCC--hhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEec
Q 003278 515 FSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKC--PALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY 591 (834)
Q Consensus 515 f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~--~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey 591 (834)
|...+.||+|+||+||+|.. .+++.||+|.+..... ......+.+|+++|.+++|+||+++.+++...+..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 45567799999999999986 4688999999864322 22234578899999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccccc
Q 003278 592 SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTR 671 (834)
Q Consensus 592 ~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~ 671 (834)
+++++|..++..... ..+++.....++.|++.||.|||+ .+|+||||||+||++++++.+||+|||++.....
T Consensus 82 ~~~~~L~~~~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~---~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 154 (285)
T cd05632 82 MNGGDLKFHIYNMGN----PGFEEERALFYAAEILCGLEDLHR---ENTVYRDLKPENILLDDYGHIRISDLGLAVKIPE 154 (285)
T ss_pred ccCccHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEECCCCCEEEecCCcceecCC
Confidence 999999988764321 248899999999999999999996 6899999999999999999999999999865432
Q ss_pred CCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCcccc
Q 003278 672 NDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAE 751 (834)
Q Consensus 672 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (834)
.. ......||..|+|||++.+..++.++|||||||++|||+||..||................... ..
T Consensus 155 ~~--------~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~----~~ 222 (285)
T cd05632 155 GE--------SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLET----EE 222 (285)
T ss_pred CC--------cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcc----cc
Confidence 11 1123578999999999998999999999999999999999999987543221111111100000 00
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChh
Q 003278 752 LVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMR 788 (834)
Q Consensus 752 ~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~ 788 (834)
....... . .+.+++..||+.||++|||+.
T Consensus 223 ----~~~~~~~-~---~~~~li~~~l~~~P~~R~~~~ 251 (285)
T cd05632 223 ----VYSAKFS-E---EAKSICKMLLTKDPKQRLGCQ 251 (285)
T ss_pred ----ccCccCC-H---HHHHHHHHHccCCHhHcCCCc
Confidence 0111121 2 344566689999999999954
No 366
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.5e-36 Score=327.77 Aligned_cols=264 Identities=22% Similarity=0.302 Sum_probs=200.5
Q ss_pred hCcCcCCcccccCCcEEEEEEEC--------CCcEEEEEEecCCCChhHHHHHHHHHHHHHhc-cCCCceeEEEEEeeCC
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLD--------NHQYVLVKRLGMSKCPALRTRFSNELQNLARL-RHRNLVQLCGWCTEQG 583 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~--------~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l-~HpNiv~l~g~~~~~~ 583 (834)
++|...+.||+|+||.||++... ....||+|.+...........|.+|+.++.++ +|||||+++++|.+.+
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 45667789999999999998742 24568999887554444556789999999999 6999999999999999
Q ss_pred eEEEEEeccCCCchhhhhhcCCC----------CCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeec
Q 003278 584 EMLVIYDYSATRILSHLLFHNNH----------RIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLD 653 (834)
Q Consensus 584 ~~~lv~Ey~~~g~L~~~l~~~~~----------~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld 653 (834)
..+++|||+++|+|.+++..... ......++|...+.++.|++.||+|||+ .+|+||||||+|||++
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nill~ 168 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES---RRCIHRDLAARNVLVT 168 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH---CCeeeccccceeEEEc
Confidence 99999999999999999875421 0112358899999999999999999996 6999999999999999
Q ss_pred CCCCceEeeeeeccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCc
Q 003278 654 PDMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPE 732 (834)
Q Consensus 654 ~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~ 732 (834)
+++.+|++|||+++........ .......++..|||||++.++.++.++|||||||++|||+| |..|+....+.
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~ 243 (314)
T cd05099 169 EDNVMKIADFGLARGVHDIDYY-----KKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVE 243 (314)
T ss_pred CCCcEEEccccccccccccccc-----cccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHH
Confidence 9999999999999765322110 00111234567999999998999999999999999999999 78887543222
Q ss_pred hhHHHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccCCc
Q 003278 733 GLLVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGNDK 799 (834)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~~~ 799 (834)
.+...... ... .+ .... ... .+..++.+||..+|++|||+.+|++.|+....
T Consensus 244 -~~~~~~~~----~~~-~~-----~~~~-~~~---~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 295 (314)
T cd05099 244 -ELFKLLRE----GHR-MD-----KPSN-CTH---ELYMLMRECWHAVPTQRPTFKQLVEALDKVLA 295 (314)
T ss_pred -HHHHHHHc----CCC-CC-----CCCC-CCH---HHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 22221111 000 00 1111 122 44566679999999999999999999976543
No 367
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-37 Score=331.84 Aligned_cols=245 Identities=25% Similarity=0.385 Sum_probs=197.5
Q ss_pred CCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChh---hHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEc
Q 003278 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGER---FEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDY 189 (834)
Q Consensus 113 f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~---~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 189 (834)
|...+.||.|+||.||-+++..+...||||++.-.+.+ ....++.||..|.+++|||+|.+.|||..+...||||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 66778999999999999999999999999998654433 345688999999999999999999999999999999999
Q ss_pred cCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhh
Q 003278 190 MPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLE 269 (834)
Q Consensus 190 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~ 269 (834)
|- ||-.++|.-. ..+|..-.+..|..+++.||+|||+. +.||||||..||||.+.+.+||+|||.|....
T Consensus 108 Cl-GSAsDlleVh------kKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~ 177 (948)
T KOG0577|consen 108 CL-GSASDLLEVH------KKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMA 177 (948)
T ss_pred Hh-ccHHHHHHHH------hccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcC
Confidence 95 5777777543 24688888999999999999999996 89999999999999999999999999886532
Q ss_pred hhhhhhhhcccccccccccccceeeeccccCCCcccccc--CCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHH
Q 003278 270 HELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQK--GSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347 (834)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~--~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~ 347 (834)
...+++|||.|||||++.. .+.|+.|+||||+|++..||.-.++|.-.. +..
T Consensus 178 --------------------PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnM------NAM 231 (948)
T KOG0577|consen 178 --------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM------NAM 231 (948)
T ss_pred --------------------chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCc------hHH
Confidence 1456789999999998853 347899999999999999999999986432 111
Q ss_pred HHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHH
Q 003278 348 DWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIE 403 (834)
Q Consensus 348 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~ 403 (834)
.-... +.+.-.|.+..+++. +.+..+.-.||+.-|.+|||..+++.
T Consensus 232 SALYH------IAQNesPtLqs~eWS----~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 232 SALYH------IAQNESPTLQSNEWS----DYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred HHHHH------HHhcCCCCCCCchhH----HHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 11111 222233444333332 45778888999999999999877654
No 368
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=3.3e-36 Score=320.81 Aligned_cols=254 Identities=24% Similarity=0.342 Sum_probs=193.9
Q ss_pred CcccccCCcEEEEEEECC-------CcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEec
Q 003278 519 QRVAEMDFGTAYQGFLDN-------HQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY 591 (834)
Q Consensus 519 ~~ig~g~~g~vy~~~~~~-------~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey 591 (834)
+.||+|+||.||+|...+ +..+|||.+...........|.+|+.++++++||||++++++|...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 358999999999998643 2578999876544344556899999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCC-CCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCC-----CceEeeeee
Q 003278 592 SATRILSHLLFHNNHRI-GHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDM-----NPRLGSFAL 665 (834)
Q Consensus 592 ~~~g~L~~~l~~~~~~~-~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~-----~~ki~DfGl 665 (834)
+++++|.+++....... ....++|..++.++.|++.||+|||+ .+++|+||||+||+++.+. .+|++|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQ---MHFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHh---CCcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 99999999987543211 22347899999999999999999996 6899999999999999877 899999999
Q ss_pred ccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHh
Q 003278 666 AEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEA 744 (834)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~ 744 (834)
++.+...... .......++..|+|||++.++.++.++|||||||++|||+| |+.|+....... ..... ..
T Consensus 158 ~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~-~~~~~---~~ 228 (269)
T cd05044 158 ARDIYKSDYY-----RKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE-VLQHV---TA 228 (269)
T ss_pred cccccccccc-----ccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHH-HHHHH---hc
Confidence 9765322110 01112345778999999999999999999999999999998 888875432211 11111 00
Q ss_pred hcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHc
Q 003278 745 RKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795 (834)
Q Consensus 745 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~ 795 (834)
.... ... ...+. .+.+++.+||..+|.+||++.+|++.|+
T Consensus 229 ~~~~-------~~~-~~~~~---~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 229 GGRL-------QKP-ENCPD---KIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred CCcc-------CCc-ccchH---HHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 0000 001 11123 3456667999999999999999999885
No 369
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=2.4e-36 Score=331.36 Aligned_cols=239 Identities=18% Similarity=0.199 Sum_probs=182.8
Q ss_pred CcccccCCcEEEEEEEC-CCcEEEEEEecCCC--ChhHHHHHHHHHH-HHHhccCCCceeEEEEEeeCCeEEEEEeccCC
Q 003278 519 QRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSK--CPALRTRFSNELQ-NLARLRHRNLVQLCGWCTEQGEMLVIYDYSAT 594 (834)
Q Consensus 519 ~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~f~~E~~-~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~~ 594 (834)
+.||+|+||+||+|... +++.||||.+.... .......+..|.. +++.++|||||++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 35899999999999964 68899999986432 1122234555544 56889999999999999999999999999999
Q ss_pred CchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCC
Q 003278 595 RILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674 (834)
Q Consensus 595 g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~ 674 (834)
|+|..++.... .+++.....++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~---~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~- 150 (323)
T cd05575 81 GELFFHLQRER------SFPEPRARFYAAEIASALGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS- 150 (323)
T ss_pred CCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCC-
Confidence 99998886532 37788888899999999999996 699999999999999999999999999987532111
Q ss_pred CCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCccccccc
Q 003278 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVD 754 (834)
Q Consensus 675 ~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 754 (834)
.......||+.|||||++.+..++.++|||||||++|||+||+.||....... +.... .. .+.
T Consensus 151 ------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~~~~i---~~--~~~----- 213 (323)
T cd05575 151 ------KTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAE-MYDNI---LN--KPL----- 213 (323)
T ss_pred ------CccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHH-HHHHH---Hc--CCC-----
Confidence 11234679999999999999999999999999999999999999986433221 11111 11 111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhH
Q 003278 755 LSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQ 789 (834)
Q Consensus 755 ~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~ 789 (834)
.+.... ... +..+..+|++.||++||++.+
T Consensus 214 -~~~~~~-~~~---~~~li~~~l~~~p~~R~~~~~ 243 (323)
T cd05575 214 -RLKPNI-SVS---ARHLLEGLLQKDRTKRLGAKD 243 (323)
T ss_pred -CCCCCC-CHH---HHHHHHHHhhcCHHhCCCCCC
Confidence 111112 223 445555899999999999863
No 370
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=6.6e-36 Score=326.81 Aligned_cols=204 Identities=22% Similarity=0.399 Sum_probs=162.3
Q ss_pred CCeeeccCCeEEEEEEEC--CCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEe--CCEEEEEEEccC
Q 003278 116 DEVLGSGGFGKVYRAVLP--SDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVH--EDQLLLVYDYMP 191 (834)
Q Consensus 116 ~~~LG~G~fG~Vy~~~~~--~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~--~~~~~lV~Ey~~ 191 (834)
.++||+|+||+||+|+.+ .+++.||+|.+.... ....+.+|+.++++++||||+++++++.. ....++||||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 468999999999999975 356899999986542 23457789999999999999999999865 456899999986
Q ss_pred CCCHhHHHhcCCCc--cccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEE----CCCCceEEeeccch
Q 003278 192 NRSLDRVLFRRPEN--LEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVML----DSQYNARLGDFGLA 265 (834)
Q Consensus 192 ~gsL~~~l~~~~~~--~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl----d~~~~~kl~DFGla 265 (834)
++|..++...... ......+++.....|+.|++.||.|||+. +|+||||||+|||+ +.++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 5787776432111 11224589999999999999999999986 99999999999999 45678999999999
Q ss_pred hhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCC
Q 003278 266 RWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLT 338 (834)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~ 338 (834)
+....... .........||+.|+|||++.....++.++|||||||++|||+||++||...
T Consensus 160 ~~~~~~~~-------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 160 RLFNSPLK-------------PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred eccCCCCc-------------cccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 86432110 0111234578999999999876556789999999999999999999998644
No 371
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.6e-36 Score=322.92 Aligned_cols=256 Identities=24% Similarity=0.379 Sum_probs=199.5
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc-ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEc
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDY 189 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 189 (834)
++|+..+.||+|+||.||+|.+..+|..||+|.+... .......+.+|+.++.+++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 3577889999999999999999889999999988643 233456789999999999999999999999999999999999
Q ss_pred cCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhh
Q 003278 190 MPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLE 269 (834)
Q Consensus 190 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~ 269 (834)
+++++|..++.... ....+++..+..++.|++.||.|||+. .+|+||||||+|||++.++.+||+|||++..+.
T Consensus 81 ~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 154 (286)
T cd06622 81 MDAGSLDKLYAGGV----ATEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLV 154 (286)
T ss_pred cCCCCHHHHHHhcc----ccCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 99999999886431 124689999999999999999999973 489999999999999999999999999987542
Q ss_pred hhhhhhhhcccccccccccccceeeeccccCCCccccccCC-----CCCcccceeehhhHHHHHHhCCccCCCCCCCccc
Q 003278 270 HELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGS-----VATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQI 344 (834)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~-----~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~ 344 (834)
.. ......|++.|+|||.+.... .++.++|||||||++|||+||+.||......
T Consensus 155 ~~------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--- 213 (286)
T cd06622 155 AS------------------LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYA--- 213 (286)
T ss_pred CC------------------ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchh---
Confidence 11 022345889999999875432 3478999999999999999999998643211
Q ss_pred hHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 345 ILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 345 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
....-..... .+. .+.+. .. ....+.+++..||+.+|++||++.++++.
T Consensus 214 ~~~~~~~~~~-~~~-----~~~~~-~~----~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 214 NIFAQLSAIV-DGD-----PPTLP-SG----YSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred hHHHHHHHHh-hcC-----CCCCC-cc----cCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 1111111111 111 01111 11 12457789999999999999999998863
No 372
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=7.1e-36 Score=315.73 Aligned_cols=251 Identities=22% Similarity=0.323 Sum_probs=199.3
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc-ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEcc
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYM 190 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 190 (834)
+|+..+.||+|+||.||++....++..||+|.+... .....+.+.+|+.++++++||||+++++++...+.+++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 467788999999999999999889999999987542 3344567889999999999999999999999999999999999
Q ss_pred CCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhh
Q 003278 191 PNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEH 270 (834)
Q Consensus 191 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~ 270 (834)
++|+|.+++.... ...+++.....++.|++.||.|||+. +|+|+||||+|||+++++.++|+|||+++.+..
T Consensus 81 ~~~~l~~~~~~~~-----~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 152 (255)
T cd08219 81 DGGDLMQKIKLQR-----GKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTS 152 (255)
T ss_pred CCCcHHHHHHhcc-----CCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeecc
Confidence 9999998885432 24578899999999999999999985 999999999999999999999999999875432
Q ss_pred hhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHH
Q 003278 271 ELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWI 350 (834)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~ 350 (834)
... ......|++.|+|||.+... .++.++||||||+++|+|++|+.||..... ....
T Consensus 153 ~~~----------------~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~------~~~~ 209 (255)
T cd08219 153 PGA----------------YACTYVGTPYYVPPEIWENM-PYNNKSDIWSLGCILYELCTLKHPFQANSW------KNLI 209 (255)
T ss_pred ccc----------------ccccccCCccccCHHHHccC-CcCchhhhhhhchhheehhhccCCCCCCCH------HHHH
Confidence 110 02234589999999988654 578999999999999999999999864211 1111
Q ss_pred HHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 351 RRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 351 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
.... .+.... +. ... ...+.+++..||+.||++||++.+++..
T Consensus 210 ~~~~-~~~~~~-~~-----~~~----~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 210 LKVC-QGSYKP-LP-----SHY----SYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHHh-cCCCCC-CC-----ccc----CHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 1111 111111 10 111 1347788999999999999999999864
No 373
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=2.5e-36 Score=320.85 Aligned_cols=256 Identities=25% Similarity=0.383 Sum_probs=197.6
Q ss_pred cCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEc
Q 003278 110 SNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDY 189 (834)
Q Consensus 110 t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 189 (834)
.++|+..+.||+|+||.||+|.+..+ ..||+|++.... ...+.|.+|+.++++++||||+++++++. .+..++||||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~ 81 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEY 81 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEc
Confidence 35688899999999999999998544 569999987532 23467899999999999999999999875 4568999999
Q ss_pred cCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhh
Q 003278 190 MPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLE 269 (834)
Q Consensus 190 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~ 269 (834)
+++|+|.+++.... ...++|..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 82 ~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~ 153 (262)
T cd05071 82 MSKGSLLDFLKGEM-----GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 153 (262)
T ss_pred CCCCcHHHHHhhcc-----ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeecc
Confidence 99999999996532 23578999999999999999999985 99999999999999999999999999997543
Q ss_pred hhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCccchHHH
Q 003278 270 HELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQIILLD 348 (834)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~~l~~ 348 (834)
.... .......|+..|+|||+...+ .++.++|||||||++|||+| |+.|+...... .+
T Consensus 154 ~~~~---------------~~~~~~~~~~~y~~PE~~~~~-~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~---~~-- 212 (262)
T cd05071 154 DNEY---------------TARQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVNR---EV-- 212 (262)
T ss_pred cccc---------------ccccCCcccceecCHhHhccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCChH---HH--
Confidence 2110 001123467889999987654 57999999999999999999 77777543211 11
Q ss_pred HHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcCC
Q 003278 349 WIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGSY 409 (834)
Q Consensus 349 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~~ 409 (834)
.... ..+... .. .......+.+++..|++.+|++||++.++++.|+..+
T Consensus 213 -~~~~-~~~~~~-----~~-----~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~ 261 (262)
T cd05071 213 -LDQV-ERGYRM-----PC-----PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 261 (262)
T ss_pred -HHHH-hcCCCC-----CC-----ccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence 1111 111000 00 1112346789999999999999999999999987643
No 374
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=3e-36 Score=329.83 Aligned_cols=242 Identities=17% Similarity=0.192 Sum_probs=188.5
Q ss_pred CcccccCCcEEEEEEEC-CCcEEEEEEecCCC--ChhHHHHHHHHHHHHHhc-cCCCceeEEEEEeeCCeEEEEEeccCC
Q 003278 519 QRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSK--CPALRTRFSNELQNLARL-RHRNLVQLCGWCTEQGEMLVIYDYSAT 594 (834)
Q Consensus 519 ~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~f~~E~~~l~~l-~HpNiv~l~g~~~~~~~~~lv~Ey~~~ 594 (834)
+.||+|+||.||++... ++..||||.+.... .......+..|+.++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 35899999999999875 47789999986432 223345678899999888 799999999999999999999999999
Q ss_pred CchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCC
Q 003278 595 RILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674 (834)
Q Consensus 595 g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~ 674 (834)
|+|..++.... .+++.....++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~~------~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~- 150 (318)
T cd05570 81 GDLMFHIQRSG------RFDEPRARFYAAEIVLGLQFLHE---RGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG- 150 (318)
T ss_pred CCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHh---CCeEccCCCHHHeEECCCCcEEecccCCCeecCcCC-
Confidence 99998876432 38899999999999999999996 699999999999999999999999999986532111
Q ss_pred CCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCccccccc
Q 003278 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVD 754 (834)
Q Consensus 675 ~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 754 (834)
......+||+.|||||++.+..++.++|||||||++|||+||+.||...... ...... ... ..
T Consensus 151 ------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~-~~~~~i---~~~-~~------ 213 (318)
T cd05570 151 ------VTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED-ELFQSI---LED-EV------ 213 (318)
T ss_pred ------CcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH-HHHHHH---HcC-CC------
Confidence 1123457999999999999999999999999999999999999998643322 111111 110 10
Q ss_pred cccCCCCCHHHHHHHHHHHHHhccCCCCCCCCh-----hHHHH
Q 003278 755 LSLNGEYNHKELMRLIKLGIACTLSNPELRPSM-----RQILS 792 (834)
Q Consensus 755 ~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm-----~~v~~ 792 (834)
...... ..+ +..++.+||+.||++|||+ .++++
T Consensus 214 -~~~~~~-~~~---~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 214 -RYPRWL-SKE---AKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred -CCCCcC-CHH---HHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 011111 223 4455568999999999999 66654
No 375
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=6.3e-36 Score=317.30 Aligned_cols=252 Identities=21% Similarity=0.359 Sum_probs=194.8
Q ss_pred CcCcCCcccccCCcEEEEEEECCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEeccC
Q 003278 514 NFSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSA 593 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~ 593 (834)
.|.....||+|+||.||+|...++..+|+|.+.... ...+.|.+|++++++++||||+++++++.+ +..+++|||++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~ 83 (260)
T cd05069 7 SLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT--MMPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVTEFMG 83 (260)
T ss_pred HeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC--ccHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCcEEEEEcCC
Confidence 456667899999999999998777789999876432 234678999999999999999999998854 56889999999
Q ss_pred CCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCC
Q 003278 594 TRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRND 673 (834)
Q Consensus 594 ~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~ 673 (834)
+|+|.+++.... ...++|..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++.......
T Consensus 84 ~~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05069 84 KGSLLDFLKEGD----GKYLKLPQLVDMAAQIADGMAYIER---MNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE 156 (260)
T ss_pred CCCHHHHHhhCC----CCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCeEEECCCccceEccCCc
Confidence 999999986532 1247899999999999999999996 689999999999999999999999999997653221
Q ss_pred CCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcCccccc
Q 003278 674 HGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRPLAEL 752 (834)
Q Consensus 674 ~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (834)
. .......++..|+|||++.++.++.++|||||||++|||+| |..|+....+.. ..... .....+
T Consensus 157 ~------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-~~~~~---~~~~~~---- 222 (260)
T cd05069 157 Y------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE-VLEQV---ERGYRM---- 222 (260)
T ss_pred c------cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHH---HcCCCC----
Confidence 1 11112346788999999998999999999999999999999 888876433322 11111 110000
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHcc
Q 003278 753 VDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDG 796 (834)
Q Consensus 753 ~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~ 796 (834)
..... .+. .+.+++.+||..||++||++.+|.+.|+.
T Consensus 223 ---~~~~~-~~~---~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 223 ---PCPQG-CPE---SLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred ---CCCcc-cCH---HHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 00111 122 34556668999999999999999999864
No 376
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=2e-36 Score=324.16 Aligned_cols=247 Identities=26% Similarity=0.414 Sum_probs=197.5
Q ss_pred CCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC-hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEccC
Q 003278 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMP 191 (834)
Q Consensus 113 f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 191 (834)
|+..+.||+|+||.||+|.+..++..||+|.+.... ....+.+.+|+.++++++||||+++++++...+..++||||++
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG 85 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence 555678999999999999998889999999986432 3445678999999999999999999999999999999999999
Q ss_pred CCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhh
Q 003278 192 NRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHE 271 (834)
Q Consensus 192 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 271 (834)
+++|.+++.. ..+++..+..++.|+++||.|||+. +++|+||+|+||++++++.++|+|||+++.+...
T Consensus 86 ~~~L~~~~~~--------~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06642 86 GGSALDLLKP--------GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT 154 (277)
T ss_pred CCcHHHHhhc--------CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCc
Confidence 9999988743 3578999999999999999999985 9999999999999999999999999998754321
Q ss_pred hhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHHH
Q 003278 272 LQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIR 351 (834)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~~ 351 (834)
.. ......|+..|+|||++... .++.++|||||||++|||+||+.|+....+.. ...+
T Consensus 155 ~~----------------~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~---~~~~-- 212 (277)
T cd06642 155 QI----------------KRNTFVGTPFWMAPEVIKQS-AYDFKADIWSLGITAIELAKGEPPNSDLHPMR---VLFL-- 212 (277)
T ss_pred ch----------------hhhcccCcccccCHHHhCcC-CCchhhhHHHHHHHHHHHHhCCCCCcccchhh---HHhh--
Confidence 10 01234588999999998654 57889999999999999999999975332211 1111
Q ss_pred HHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 352 RLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 352 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
...+. .+.+. + .....+.+++..||+.+|++||+|.+|+..
T Consensus 213 --~~~~~-----~~~~~-~----~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 213 --IPKNS-----PPTLE-G----QYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred --hhcCC-----CCCCC-c----ccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 11111 11111 1 122457889999999999999999999974
No 377
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=5e-36 Score=322.88 Aligned_cols=262 Identities=26% Similarity=0.351 Sum_probs=190.0
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC--hhhHHHHHHHHHHHHhC---CCCceeeEeeeEEeC-----C
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG--ERFEKTFAAELVAVAHL---RHRNLVRLRGWCVHE-----D 181 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l---~H~nIv~l~g~~~~~-----~ 181 (834)
+|+..+.||+|+||.||+|....+|+.||+|.+.... ......+.+|+.++..+ +||||+++++++... .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 3777889999999999999999899999999886432 22233456677766655 799999999988652 4
Q ss_pred EEEEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEee
Q 003278 182 QLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGD 261 (834)
Q Consensus 182 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~D 261 (834)
..++||||++ ++|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~-----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~d 151 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVP-----PPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLAD 151 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECc
Confidence 5899999998 48888886532 23489999999999999999999986 999999999999999999999999
Q ss_pred ccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCC
Q 003278 262 FGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPD 341 (834)
Q Consensus 262 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~ 341 (834)
||+++.+.... ..+...||+.|+|||.+... .++.++|||||||++|||++|++||......
T Consensus 152 fg~~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~ 213 (288)
T cd07863 152 FGLARIYSCQM-----------------ALTPVVVTLWYRAPEVLLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEA 213 (288)
T ss_pred cCccccccCcc-----------------cCCCccccccccCchHhhCC-CCCCcchhhhHHHHHHHHHhCCcCcCCCCHH
Confidence 99997542210 12334689999999988654 5799999999999999999999998643221
Q ss_pred ccchHHHHHHHHhhc---Cccc---cccccccCCCC------CCHHHHHHHHHHHHHhcccCCCCCCchhhHHH
Q 003278 342 DQIILLDWIRRLSDE---GKVL---QAGDNRLSDGS------YKLCDMEHLTHLALLCTLHNPHLRPSMKWVIE 403 (834)
Q Consensus 342 ~~~~l~~~~~~~~~~---~~~~---~~~d~~l~~~~------~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~ 403 (834)
+. +.... ..... .... ........... ......+.+.+++..|++.||++||++.+++.
T Consensus 214 ~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 214 DQ--LGKIF-DLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred HH--HHHHH-HHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 11 11111 10000 0000 00000000000 00011245678999999999999999999875
No 378
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.4e-36 Score=320.45 Aligned_cols=254 Identities=19% Similarity=0.265 Sum_probs=194.2
Q ss_pred hCcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEec
Q 003278 513 NNFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY 591 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey 591 (834)
++|...+.||+|+||.||+|.. .++..||+|.+...... ....+.+|+.++.+++||||+++++++...+..++||||
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~-~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGD-DFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccc-hHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 4677788999999999999996 56788999998654322 235678899999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccccc
Q 003278 592 SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTR 671 (834)
Q Consensus 592 ~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~ 671 (834)
+++++|.+++...+ .+++..+..++.|++.||.|||+ .+|+||||||+||++++++.+||+|||++..+..
T Consensus 88 ~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06646 88 CGGGSLQDIYHVTG------PLSELQIAYVCRETLQGLAYLHS---KGKMHRDIKGANILLTDNGDVKLADFGVAAKITA 158 (267)
T ss_pred CCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEECcCccceeecc
Confidence 99999999886432 37888899999999999999996 6999999999999999999999999999976532
Q ss_pred CCCCCcccccCccccccccCccchhccc---cCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCc
Q 003278 672 NDHGHRKATSGNRSVRGIFGYMSPEYIE---SGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRP 748 (834)
Q Consensus 672 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~---~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~ 748 (834)
.. .......|+..|+|||.+. ...++.++|||||||++|||+||+.|+....+....... ...
T Consensus 159 ~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~------~~~- 224 (267)
T cd06646 159 TI-------AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLM------SKS- 224 (267)
T ss_pred cc-------cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheee------ecC-
Confidence 11 1122356899999999884 455788999999999999999999998533222111000 000
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHH
Q 003278 749 LAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSIL 794 (834)
Q Consensus 749 ~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L 794 (834)
....+..... ......+.+++.+||..+|++|||+++|++.|
T Consensus 225 --~~~~~~~~~~--~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 225 --NFQPPKLKDK--TKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred --CCCCCCCccc--cccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 0000111100 01112455666799999999999999998643
No 379
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.4e-36 Score=335.17 Aligned_cols=198 Identities=28% Similarity=0.339 Sum_probs=166.1
Q ss_pred cCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc--ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCC------
Q 003278 110 SNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK--GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHED------ 181 (834)
Q Consensus 110 t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~------ 181 (834)
.++|...+.||+|+||.||+|....+|..||||.+... .....+.+.+|+.+++.++||||+++++++...+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 99 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ 99 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence 36799999999999999999999889999999998643 2334567889999999999999999999987543
Q ss_pred EEEEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEee
Q 003278 182 QLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGD 261 (834)
Q Consensus 182 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~D 261 (834)
..|+||||+++ +|...+. ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|
T Consensus 100 ~~~lv~e~~~~-~l~~~~~---------~~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~D 166 (359)
T cd07876 100 DVYLVMELMDA-NLCQVIH---------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILD 166 (359)
T ss_pred eeEEEEeCCCc-CHHHHHh---------ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEec
Confidence 47999999975 5555553 2377888999999999999999985 999999999999999999999999
Q ss_pred ccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCC
Q 003278 262 FGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLT 338 (834)
Q Consensus 262 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~ 338 (834)
||+++..... ...+...||+.|+|||.+... .++.++|||||||++|||+||+.||...
T Consensus 167 fg~a~~~~~~-----------------~~~~~~~~t~~y~aPE~~~~~-~~~~~~DiwSlG~il~el~tg~~pf~~~ 225 (359)
T cd07876 167 FGLARTACTN-----------------FMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGELVKGSVIFQGT 225 (359)
T ss_pred CCCccccccC-----------------ccCCCCcccCCCCCchhccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 9999743211 012334689999999998644 6789999999999999999999998643
No 380
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.5e-36 Score=326.07 Aligned_cols=263 Identities=26% Similarity=0.401 Sum_probs=200.2
Q ss_pred CCCCCCCeeeccCCeEEEEEEEC-------CCCeEEEEEEecccC-hhhHHHHHHHHHHHHhC-CCCceeeEeeeEEeCC
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLP-------SDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHL-RHRNLVRLRGWCVHED 181 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~-------~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~ 181 (834)
++|...+.||+|+||.||+|... .....||+|.+.... ......+.+|+.++.++ +||||++++++|...+
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 46788899999999999999752 235679999987532 33456788999999999 6999999999999999
Q ss_pred EEEEEEEccCCCCHhHHHhcCCCc---------cccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEEC
Q 003278 182 QLLLVYDYMPNRSLDRVLFRRPEN---------LEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLD 252 (834)
Q Consensus 182 ~~~lV~Ey~~~gsL~~~l~~~~~~---------~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld 252 (834)
..++||||+++|+|.+++...... ......++|.+++.++.|++.||.|||+. +|+||||||+|||++
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill~ 168 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNVLVT 168 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeEEEc
Confidence 999999999999999999654211 01124689999999999999999999985 999999999999999
Q ss_pred CCCceEEeeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-C
Q 003278 253 SQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-G 331 (834)
Q Consensus 253 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G 331 (834)
.++.+||+|||+++........ .......+++.|||||.+..+ .++.++|||||||++|||+| |
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~~g 233 (314)
T cd05099 169 EDNVMKIADFGLARGVHDIDYY--------------KKTSNGRLPVKWMAPEALFDR-VYTHQSDVWSFGILMWEIFTLG 233 (314)
T ss_pred CCCcEEEccccccccccccccc--------------cccccCCCCccccCHHHHccC-CcCccchhhHHHHHHHHHHhCC
Confidence 9999999999999854321100 001112345689999988654 67899999999999999999 8
Q ss_pred CccCCCCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcC
Q 003278 332 RRAVDLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGS 408 (834)
Q Consensus 332 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~ 408 (834)
..|+...... .+.. ....+...... . .....+.+++..||+.+|++||++.++++.|...
T Consensus 234 ~~p~~~~~~~---~~~~----~~~~~~~~~~~------~----~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~ 293 (314)
T cd05099 234 GSPYPGIPVE---ELFK----LLREGHRMDKP------S----NCTHELYMLMRECWHAVPTQRPTFKQLVEALDKV 293 (314)
T ss_pred CCCCCCCCHH---HHHH----HHHcCCCCCCC------C----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 8887532211 1111 11122111110 1 1123577899999999999999999999998764
No 381
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=5.1e-36 Score=329.33 Aligned_cols=206 Identities=21% Similarity=0.266 Sum_probs=167.2
Q ss_pred CCCeeecc--CCeEEEEEEECCCCeEEEEEEeccc--ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEcc
Q 003278 115 EDEVLGSG--GFGKVYRAVLPSDGTVVAVKCLAEK--GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYM 190 (834)
Q Consensus 115 ~~~~LG~G--~fG~Vy~~~~~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 190 (834)
..++||+| +||+||++..+.+|..||||++... .....+.+.+|+.+++.++|||||+++++|..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 35689999 7899999999999999999998653 2344566788999999999999999999999999999999999
Q ss_pred CCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhh
Q 003278 191 PNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEH 270 (834)
Q Consensus 191 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~ 270 (834)
++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.++++|||.+..+..
T Consensus 82 ~~~~l~~~~~~~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~ 153 (327)
T cd08227 82 AYGSAKDLICTHF-----MDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMIN 153 (327)
T ss_pred CCCcHHHHHHhhc-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhcccc
Confidence 9999999986432 13589999999999999999999985 999999999999999999999999987643321
Q ss_pred hhhhhhhcccccccccccccceeeeccccCCCccccccC-CCCCcccceeehhhHHHHHHhCCccCCC
Q 003278 271 ELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKG-SVATAKSDVFSFGIVVLEVVSGRRAVDL 337 (834)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~-~~~~~ksDV~SfGvvl~ElltG~~p~~~ 337 (834)
.... .. ..........++..|+|||++..+ ..++.++|||||||++|||+||+.||..
T Consensus 154 ~~~~-----~~----~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 212 (327)
T cd08227 154 HGQR-----LR----VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 212 (327)
T ss_pred cccc-----cc----ccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 1000 00 000001223477889999998653 3578999999999999999999999864
No 382
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=3.6e-36 Score=328.83 Aligned_cols=241 Identities=17% Similarity=0.184 Sum_probs=185.3
Q ss_pred CcccccCCcEEEEEEEC-CCcEEEEEEecCCCC--hhHHHHHHHHHHHHHhc-cCCCceeEEEEEeeCCeEEEEEeccCC
Q 003278 519 QRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSKC--PALRTRFSNELQNLARL-RHRNLVQLCGWCTEQGEMLVIYDYSAT 594 (834)
Q Consensus 519 ~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~--~~~~~~f~~E~~~l~~l-~HpNiv~l~g~~~~~~~~~lv~Ey~~~ 594 (834)
+.||+|+||.||+|... ++..||||.++.... ......+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 35899999999999964 578999999864321 22234567788888754 899999999999999999999999999
Q ss_pred CchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCC
Q 003278 595 RILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674 (834)
Q Consensus 595 g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~ 674 (834)
|+|..++.... .+++.....++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~i~~~~------~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 150 (316)
T cd05620 81 GDLMFHIQDKG------RFDLYRATFYAAEIVCGLQFLHS---KGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD- 150 (316)
T ss_pred CcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEeCccCCCeecccCC-
Confidence 99998886532 37788888999999999999996 699999999999999999999999999986422111
Q ss_pred CCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCccccccc
Q 003278 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVD 754 (834)
Q Consensus 675 ~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 754 (834)
......+||+.|+|||++.+..++.++|||||||++|||+||+.||....... +.... ... .
T Consensus 151 ------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~-~~~~~---~~~-~------- 212 (316)
T cd05620 151 ------NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDE-LFESI---RVD-T------- 212 (316)
T ss_pred ------CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH-HHHHH---HhC-C-------
Confidence 11234679999999999999999999999999999999999999986443221 11111 110 1
Q ss_pred cccCCCCCHHHHHHHHHHHHHhccCCCCCCCChh-HHH
Q 003278 755 LSLNGEYNHKELMRLIKLGIACTLSNPELRPSMR-QIL 791 (834)
Q Consensus 755 ~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~-~v~ 791 (834)
+.+... ...++ ..++.+||+.||++||++. ++.
T Consensus 213 ~~~~~~-~~~~~---~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 213 PHYPRW-ITKES---KDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred CCCCCC-CCHHH---HHHHHHHccCCHHHcCCChHHHH
Confidence 111111 12333 4455589999999999985 554
No 383
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=4.6e-36 Score=323.17 Aligned_cols=257 Identities=19% Similarity=0.204 Sum_probs=195.4
Q ss_pred hhCcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCCCh--hHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEE
Q 003278 512 TNNFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCP--ALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVI 588 (834)
Q Consensus 512 t~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~--~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv 588 (834)
.++|.....||+|+||.||.+.- +.|.++|+|+++.+..- ...+-.+.|=.+|...++|+||+||-.|.+.+.+|||
T Consensus 140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLi 219 (550)
T KOG0605|consen 140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLI 219 (550)
T ss_pred cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEE
Confidence 46888899999999999999985 55899999999754321 1223456788999999999999999999999999999
Q ss_pred EeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccc
Q 003278 589 YDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEF 668 (834)
Q Consensus 589 ~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~ 668 (834)
|||++||++..+|...+ .|+......++.+++.|++-||. .|+|||||||+|+|||..|++|++||||+.-
T Consensus 220 MEylPGGD~mTLL~~~~------~L~e~~arfYiaE~vlAI~~iH~---~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~g 290 (550)
T KOG0605|consen 220 MEYLPGGDMMTLLMRKD------TLTEDWARFYIAETVLAIESIHQ---LGYIHRDIKPDNLLIDAKGHIKLSDFGLSTG 290 (550)
T ss_pred EEecCCccHHHHHHhcC------cCchHHHHHHHHHHHHHHHHHHH---cCcccccCChhheeecCCCCEeeccccccch
Confidence 99999999999997643 47776677789999999999997 6999999999999999999999999999964
Q ss_pred cccCCC-------------------CCccc--c-c------------------CccccccccCccchhccccCCCCccCc
Q 003278 669 LTRNDH-------------------GHRKA--T-S------------------GNRSVRGIFGYMSPEYIESGEATSMAD 708 (834)
Q Consensus 669 ~~~~~~-------------------~~~~~--~-~------------------~~~~~~Gt~~Y~aPE~~~~~~~~~k~D 708 (834)
+..... ..... + . ...+.+|||-|||||++.+..|+..+|
T Consensus 291 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cD 370 (550)
T KOG0605|consen 291 LDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECD 370 (550)
T ss_pred hhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCcccc
Confidence 322100 00000 0 0 012357999999999999999999999
Q ss_pred chhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHh-hcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCC-
Q 003278 709 VYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEA-RKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPS- 786 (834)
Q Consensus 709 V~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPt- 786 (834)
.||+|||+|||+.|-.||....|.... ..+..+.. ...|.. .....++.. |+.+|+. ||++|--
T Consensus 371 wWSLG~ImyEmLvGyPPF~s~tp~~T~-rkI~nwr~~l~fP~~---------~~~s~eA~D---LI~rll~-d~~~RLG~ 436 (550)
T KOG0605|consen 371 WWSLGCIMYEMLVGYPPFCSETPQETY-RKIVNWRETLKFPEE---------VDLSDEAKD---LITRLLC-DPENRLGS 436 (550)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHHHhhhccCCCc---------CcccHHHHH---HHHHHhc-CHHHhcCc
Confidence 999999999999999999887776543 22333221 111111 111244444 4447777 9999975
Q ss_pred --hhHHH
Q 003278 787 --MRQIL 791 (834)
Q Consensus 787 --m~~v~ 791 (834)
+.||-
T Consensus 437 ~G~~EIK 443 (550)
T KOG0605|consen 437 KGAEEIK 443 (550)
T ss_pred ccHHHHh
Confidence 44443
No 384
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=2.6e-36 Score=327.54 Aligned_cols=265 Identities=22% Similarity=0.287 Sum_probs=197.7
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC-hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEc
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDY 189 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 189 (834)
++|...+.||+|+||.||+|....++..||+|.+.... ......+.+|+.++++++||||+++++++...+..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 46888899999999999999998889999999986432 23345678899999999999999999999999999999999
Q ss_pred cCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhh
Q 003278 190 MPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLE 269 (834)
Q Consensus 190 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~ 269 (834)
++ ++|..++... ...+++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 86 ~~-~~l~~~l~~~------~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 155 (301)
T cd07873 86 LD-KDLKQYLDDC------GNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKS 155 (301)
T ss_pred cc-cCHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccC
Confidence 97 5888887543 23578899999999999999999985 99999999999999999999999999987432
Q ss_pred hhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHH
Q 003278 270 HELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDW 349 (834)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~ 349 (834)
... .......+|+.|+|||.+.....++.++|||||||++|||+||+.||......+. ...
T Consensus 156 ~~~----------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~---~~~ 216 (301)
T cd07873 156 IPT----------------KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQ---LHF 216 (301)
T ss_pred CCC----------------CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHH
Confidence 110 0012234789999999886655678899999999999999999999864332111 111
Q ss_pred HHHHh------------hcCccccccccccCCCC---CCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 350 IRRLS------------DEGKVLQAGDNRLSDGS---YKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 350 ~~~~~------------~~~~~~~~~d~~l~~~~---~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
+.... ..........+...... ....-...+.+|+..|++.||.+||++.++++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 217 IFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred HHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 11110 00000000000000000 000011346789999999999999999999863
No 385
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=7.8e-36 Score=320.74 Aligned_cols=264 Identities=24% Similarity=0.296 Sum_probs=199.6
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC--hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG--ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYD 188 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 188 (834)
++|+..+.||+|+||.||+|.++.+|+.||+|++.... ....+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46888899999999999999998889999999886432 2344668899999999999999999999999999999999
Q ss_pred ccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhh
Q 003278 189 YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWL 268 (834)
Q Consensus 189 y~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 268 (834)
|+++++|..++... ..++|..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++..+
T Consensus 81 ~~~~~~l~~~~~~~-------~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 150 (286)
T cd07847 81 YCDHTVLNELEKNP-------RGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARIL 150 (286)
T ss_pred ccCccHHHHHHhCC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceec
Confidence 99999988776432 3589999999999999999999985 9999999999999999999999999999764
Q ss_pred hhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHH
Q 003278 269 EHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLD 348 (834)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~ 348 (834)
..... ......|+..|+|||++.....++.++|||||||++|||+||+.||......+. +..
T Consensus 151 ~~~~~----------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~--~~~ 212 (286)
T cd07847 151 TGPGD----------------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQ--LYL 212 (286)
T ss_pred CCCcc----------------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHH--HHH
Confidence 32110 012334788999999986555678899999999999999999999864332211 111
Q ss_pred HHHHH----------hhcCccc-cccccccCCCCCCHH-----HHHHHHHHHHHhcccCCCCCCchhhHHH
Q 003278 349 WIRRL----------SDEGKVL-QAGDNRLSDGSYKLC-----DMEHLTHLALLCTLHNPHLRPSMKWVIE 403 (834)
Q Consensus 349 ~~~~~----------~~~~~~~-~~~d~~l~~~~~~~~-----~~~~l~~l~~~Cl~~~p~~RPsm~~V~~ 403 (834)
..... ....... ....+.. ....+.. ....+.++...||+.+|++||++.+++.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 213 IRKTLGDLIPRHQQIFSTNQFFKGLSIPEP-ETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred HHHHhCCCChHHhhhcccccccccccCCCc-ccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 11100 0000000 0000000 0000100 1245778999999999999999999875
No 386
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.7e-36 Score=328.89 Aligned_cols=264 Identities=25% Similarity=0.383 Sum_probs=201.4
Q ss_pred CCCCCCCeeeccCCeEEEEEEECC-------CCeEEEEEEecccC-hhhHHHHHHHHHHHHhC-CCCceeeEeeeEEeCC
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPS-------DGTVVAVKCLAEKG-ERFEKTFAAELVAVAHL-RHRNLVRLRGWCVHED 181 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~-------~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~ 181 (834)
.+|...+.||+|+||.||+|.... .+..||+|.+.... ....+.+.+|+.++.++ +||||++++++|...+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 458888999999999999997532 23479999886532 33456789999999999 8999999999999999
Q ss_pred EEEEEEEccCCCCHhHHHhcCCCc---------cccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEEC
Q 003278 182 QLLLVYDYMPNRSLDRVLFRRPEN---------LEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLD 252 (834)
Q Consensus 182 ~~~lV~Ey~~~gsL~~~l~~~~~~---------~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld 252 (834)
..++||||+++|+|.+++...... ......++|.+++.++.|++.||.|||+. +|+||||||+|||++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nill~ 168 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVLVT 168 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEc
Confidence 999999999999999999754211 01234589999999999999999999985 999999999999999
Q ss_pred CCCceEEeeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-C
Q 003278 253 SQYNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-G 331 (834)
Q Consensus 253 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G 331 (834)
.++.+||+|||+++.+...... .......++..|+|||.+... .++.++|||||||++|||++ |
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~el~~~g 233 (334)
T cd05100 169 EDNVMKIADFGLARDVHNIDYY--------------KKTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLLWEIFTLG 233 (334)
T ss_pred CCCcEEECCcccceeccccccc--------------ccccCCCcCceEcCHHHhccC-CcCchhhhHHHHHHHHHHHhcC
Confidence 9999999999999754321100 001223356789999988654 57889999999999999999 7
Q ss_pred CccCCCCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcCC
Q 003278 332 RRAVDLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGSY 409 (834)
Q Consensus 332 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~~ 409 (834)
..|+.... ..++...+. .+...... . .....+..++..||+.+|.+||+|.++++.|....
T Consensus 234 ~~p~~~~~------~~~~~~~~~-~~~~~~~~------~----~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~ 294 (334)
T cd05100 234 GSPYPGIP------VEELFKLLK-EGHRMDKP------A----NCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVL 294 (334)
T ss_pred CCCCCCCC------HHHHHHHHH-cCCCCCCC------C----CCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence 87775321 122222221 11111110 1 11246789999999999999999999999998754
No 387
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=7e-36 Score=321.10 Aligned_cols=264 Identities=23% Similarity=0.322 Sum_probs=196.3
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc--ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEc
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK--GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDY 189 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 189 (834)
+|+..+.||+|+||.||+|+...+|..||||.+... .....+.+.+|+.++.+++||||+++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 477788999999999999999889999999988543 223346788999999999999999999999999999999999
Q ss_pred cCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhh
Q 003278 190 MPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLE 269 (834)
Q Consensus 190 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~ 269 (834)
++ ++|.+++..... ...+++..+..++.|+++||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 81 ~~-~~l~~~~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 152 (285)
T cd07861 81 LS-MDLKKYLDSLPK----GQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFG 152 (285)
T ss_pred CC-CCHHHHHhcCCC----CCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecC
Confidence 97 688888754321 24689999999999999999999985 99999999999999999999999999987432
Q ss_pred hhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHH
Q 003278 270 HELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDW 349 (834)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~ 349 (834)
... ...+...|++.|+|||.+.....++.++|||||||+++||+||+.|+....... .+...
T Consensus 153 ~~~----------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~--~~~~~ 214 (285)
T cd07861 153 IPV----------------RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEID--QLFRI 214 (285)
T ss_pred CCc----------------ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH--HHHHH
Confidence 110 001223478999999988665567889999999999999999999986432111 11111
Q ss_pred HHHHhhc-----------C----ccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHH
Q 003278 350 IRRLSDE-----------G----KVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIE 403 (834)
Q Consensus 350 ~~~~~~~-----------~----~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~ 403 (834)
...+... . .........+... .. .-...+.+++..||+.||.+||++.+|+.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 215 FRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSA-VK-NLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred HHHhCCCChhhhhcchhhHHHHhhccccCcchhHHh-cC-CCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000000 0 0000000000000 00 01135678999999999999999999875
No 388
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.8e-36 Score=339.61 Aligned_cols=209 Identities=22% Similarity=0.267 Sum_probs=170.2
Q ss_pred CcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCC--ChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEe
Q 003278 514 NFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSK--CPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYD 590 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~E 590 (834)
+|...+.||+|+||.||++.. .++..||||.+.... .......+.+|+.+|.+++||||+++++++.+.+.+++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 577788999999999999985 457899999986321 11234568899999999999999999999999999999999
Q ss_pred ccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccc
Q 003278 591 YSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLT 670 (834)
Q Consensus 591 y~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~ 670 (834)
|+++|+|.+++...+ .++......++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+|..+.
T Consensus 82 ~~~~g~L~~~i~~~~------~~~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~ 152 (376)
T cd05598 82 YIPGGDMMSLLIRLG------IFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFR 152 (376)
T ss_pred CCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHEEECCCCCEEEEeCCCCcccc
Confidence 999999999986532 36677777899999999999996 699999999999999999999999999985321
Q ss_pred cCCCCC--------c----------------------------ccccCccccccccCccchhccccCCCCccCcchhhHH
Q 003278 671 RNDHGH--------R----------------------------KATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGV 714 (834)
Q Consensus 671 ~~~~~~--------~----------------------------~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGv 714 (834)
...... . ........+.||+.|||||++.+..++.++|||||||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv 232 (376)
T cd05598 153 WTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 232 (376)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccc
Confidence 000000 0 0000112457999999999999999999999999999
Q ss_pred HHHHHHhCCCccCCCCC
Q 003278 715 VVLEVVTGQMAVDFRLP 731 (834)
Q Consensus 715 vl~E~~tG~~p~~~~~~ 731 (834)
+||||+||+.||....+
T Consensus 233 ilyell~G~~Pf~~~~~ 249 (376)
T cd05598 233 ILYEMLVGQPPFLADTP 249 (376)
T ss_pred eeeehhhCCCCCCCCCH
Confidence 99999999999975543
No 389
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.2e-35 Score=314.15 Aligned_cols=250 Identities=28% Similarity=0.410 Sum_probs=200.2
Q ss_pred cCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEc
Q 003278 110 SNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDY 189 (834)
Q Consensus 110 t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 189 (834)
.++|+..+.||+|+||.||+|.. .|+.||||.+..... ..+.+.+|+.++++++|+||+++++++...+..++||||
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 81 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEY 81 (256)
T ss_pred hhhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEe
Confidence 35688889999999999999987 478999999876543 467899999999999999999999999999999999999
Q ss_pred cCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhh
Q 003278 190 MPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLE 269 (834)
Q Consensus 190 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~ 269 (834)
+++++|.+++.... ...++|..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||+++...
T Consensus 82 ~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~ 153 (256)
T cd05039 82 MAKGSLVDYLRSRG-----RAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEAS 153 (256)
T ss_pred cCCCcHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccccccc
Confidence 99999999986542 23689999999999999999999985 99999999999999999999999999997542
Q ss_pred hhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCccchHHH
Q 003278 270 HELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQIILLD 348 (834)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~~l~~ 348 (834)
.. .+...++..|+|||++..+ .++.++|||||||+++|+++ |+.|+..... ..+..
T Consensus 154 ~~-------------------~~~~~~~~~~~ape~~~~~-~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---~~~~~ 210 (256)
T cd05039 154 QG-------------------QDSGKLPVKWTAPEALREK-KFSTKSDVWSFGILLWEIYSFGRVPYPRIPL---KDVVP 210 (256)
T ss_pred cc-------------------cccCCCcccccCchhhcCC-cCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH---HHHHH
Confidence 11 1122346789999998655 57889999999999999997 9888753211 11111
Q ss_pred HHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhc
Q 003278 349 WIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSG 407 (834)
Q Consensus 349 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~ 407 (834)
....+...... . .....+.+++.+||..+|++||++.++++.|+.
T Consensus 211 ----~~~~~~~~~~~------~----~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 211 ----HVEKGYRMEAP------E----GCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred ----HHhcCCCCCCc------c----CCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 11111111000 0 112467889999999999999999999999864
No 390
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=8e-36 Score=316.39 Aligned_cols=253 Identities=21% Similarity=0.373 Sum_probs=197.7
Q ss_pred hCcCcCCcccccCCcEEEEEEECCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEecc
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYS 592 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~ 592 (834)
++|...++||+|+||.||+|...++..||+|.+...... ...|.+|+.++++++||||+++++++. .+..+++|||+
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~--~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05067 6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMS--PEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYM 82 (260)
T ss_pred HHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCc--HHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcC
Confidence 456667889999999999999988899999998754332 357899999999999999999999875 45689999999
Q ss_pred CCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccC
Q 003278 593 ATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRN 672 (834)
Q Consensus 593 ~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~ 672 (834)
++++|.+++..... ..+++..+..++.|++.||+|||+ .+++||||||+||++++++.++++|||++......
T Consensus 83 ~~~~L~~~~~~~~~----~~~~~~~~~~i~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05067 83 ENGSLVDFLKTPEG----IKLTINKLIDMAAQIAEGMAFIER---KNYIHRDLRAANILVSETLCCKIADFGLARLIEDN 155 (260)
T ss_pred CCCCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHHhEEEcCCCCEEEccCcceeecCCC
Confidence 99999998865321 247899999999999999999996 68999999999999999999999999999765422
Q ss_pred CCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcCcccc
Q 003278 673 DHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRPLAE 751 (834)
Q Consensus 673 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (834)
.. .......++..|+|||++..+.++.++|||||||++|||+| |+.|+....... ...... .....
T Consensus 156 ~~------~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~~~~~~---~~~~~--- 222 (260)
T cd05067 156 EY------TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE-VIQNLE---RGYRM--- 222 (260)
T ss_pred Cc------ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHH-HHHHHH---cCCCC---
Confidence 11 01122346788999999998999999999999999999999 998886443222 111111 11000
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHcc
Q 003278 752 LVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDG 796 (834)
Q Consensus 752 ~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~ 796 (834)
..... .+. ++.+++.+||..+|++|||++++...|+.
T Consensus 223 ----~~~~~-~~~---~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 223 ----PRPDN-CPE---ELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred ----CCCCC-CCH---HHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 01111 122 45666779999999999999999999864
No 391
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.3e-36 Score=327.02 Aligned_cols=267 Identities=22% Similarity=0.312 Sum_probs=198.8
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC--hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG--ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYD 188 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 188 (834)
++|+..+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|+.+++.++||||++++++|..++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 46888899999999999999998889999999876432 2345678899999999999999999999999999999999
Q ss_pred ccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhh
Q 003278 189 YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWL 268 (834)
Q Consensus 189 y~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 268 (834)
|+++++|..+.... ..++|..++.++.|+++||+|||+. +|+||||+|+||++++++.++|+|||++..+
T Consensus 81 ~~~~~~l~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~ 150 (286)
T cd07846 81 FVDHTVLDDLEKYP-------NGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTL 150 (286)
T ss_pred cCCccHHHHHHhcc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeec
Confidence 99999998876432 3489999999999999999999985 9999999999999999999999999998754
Q ss_pred hhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccc-hHH
Q 003278 269 EHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQI-ILL 347 (834)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~-~l~ 347 (834)
.... ...+...|+..|+|||++.....++.++|||||||++|||+||++|+......+.. .+.
T Consensus 151 ~~~~----------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~ 214 (286)
T cd07846 151 AAPG----------------EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHII 214 (286)
T ss_pred cCCc----------------cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHH
Confidence 2210 01223458899999999875556788999999999999999999888643211100 000
Q ss_pred HHHH-------HHhhcCccc-cccccccCCCC----CCHHHHHHHHHHHHHhcccCCCCCCchhhHHH
Q 003278 348 DWIR-------RLSDEGKVL-QAGDNRLSDGS----YKLCDMEHLTHLALLCTLHNPHLRPSMKWVIE 403 (834)
Q Consensus 348 ~~~~-------~~~~~~~~~-~~~d~~l~~~~----~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~ 403 (834)
.+.. ......... ....+...... ........+.+++..||+.+|++||+|.++++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 215 KCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred HHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 0000 000000000 00000000000 00011245889999999999999999999886
No 392
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=9.9e-36 Score=315.53 Aligned_cols=256 Identities=24% Similarity=0.352 Sum_probs=202.6
Q ss_pred cCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEc
Q 003278 110 SNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDY 189 (834)
Q Consensus 110 t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 189 (834)
.++|+..+.||+|+||.||+|....+++.+|+|.+........+.+.+|+.++++++||||+++++++...+.++++|||
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence 35788889999999999999999888999999998765555567899999999999999999999999999999999999
Q ss_pred cCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhh
Q 003278 190 MPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLE 269 (834)
Q Consensus 190 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~ 269 (834)
+++++|..++... ...+++..+..++.|++.||.|||+. +|+|+||||+||++++++.+||+|||++..+.
T Consensus 82 ~~~~~l~~~~~~~------~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~ 152 (262)
T cd06613 82 CGGGSLQDIYQVT------RGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLT 152 (262)
T ss_pred CCCCcHHHHHHhh------ccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhh
Confidence 9999999988643 14588999999999999999999985 99999999999999999999999999987543
Q ss_pred hhhhhhhhcccccccccccccceeeeccccCCCccccccC--CCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHH
Q 003278 270 HELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKG--SVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347 (834)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~--~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~ 347 (834)
.... ......|+..|+|||.+... ..++.++|||||||++|||+||+.|+........ ..
T Consensus 153 ~~~~----------------~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~--~~ 214 (262)
T cd06613 153 ATIA----------------KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRA--LF 214 (262)
T ss_pred hhhh----------------ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH--HH
Confidence 2210 12234588999999987543 2568899999999999999999999864322111 10
Q ss_pred HHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHH
Q 003278 348 DWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIE 403 (834)
Q Consensus 348 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~ 403 (834)
. ... ... ..+.+. ........+.+++.+||..+|..||++.+|+.
T Consensus 215 ~----~~~-~~~---~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 215 L----ISK-SNF---PPPKLK---DKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred H----HHh-ccC---CCcccc---chhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0 000 100 001110 11112345789999999999999999999875
No 393
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1.3e-35 Score=317.43 Aligned_cols=250 Identities=24% Similarity=0.404 Sum_probs=200.5
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC-hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEc
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDY 189 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 189 (834)
++|+..+.||.|+||.||+|....++..||+|.+.... ......+.+|+.+++.++|+||+++++++.++..+++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 35778889999999999999998899999999986542 33456788999999999999999999999999999999999
Q ss_pred cCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhh
Q 003278 190 MPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLE 269 (834)
Q Consensus 190 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~ 269 (834)
+++++|.+++.. .++++..+..++.|++.||.|||+. +++||||+|+||++++++.++|+|||+++.+.
T Consensus 81 ~~~~~L~~~~~~--------~~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~ 149 (274)
T cd06609 81 CGGGSCLDLLKP--------GKLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLT 149 (274)
T ss_pred eCCCcHHHHHhh--------cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeec
Confidence 999999998853 2689999999999999999999985 89999999999999999999999999997653
Q ss_pred hhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHH
Q 003278 270 HELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDW 349 (834)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~ 349 (834)
... .......|++.|+|||++... .++.++|||||||++|||+||+.|+....+.. .
T Consensus 150 ~~~----------------~~~~~~~~~~~y~~PE~~~~~-~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~------~ 206 (274)
T cd06609 150 STM----------------SKRNTFVGTPFWMAPEVIKQS-GYDEKADIWSLGITAIELAKGEPPLSDLHPMR------V 206 (274)
T ss_pred ccc----------------cccccccCCccccChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCcccCchHH------H
Confidence 221 012334688999999998755 47999999999999999999999986432211 1
Q ss_pred HHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 350 IRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 350 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
.... ..+. .+.+....+ ...+.+++..||..+|++||++.+++..
T Consensus 207 ~~~~-~~~~-----~~~~~~~~~----~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 207 LFLI-PKNN-----PPSLEGNKF----SKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred HHHh-hhcC-----CCCCccccc----CHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 1111 1111 111111111 1357788999999999999999999863
No 394
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=3.5e-36 Score=326.95 Aligned_cols=256 Identities=18% Similarity=0.317 Sum_probs=196.0
Q ss_pred hCcCcCCcccccCCcEEEEEEE-CCCc----EEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFL-DNHQ----YVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLV 587 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~-~~~~----~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~l 587 (834)
++|...+.||+|+||.||+|.. .++. .||+|.+..........+|.+|+.++++++||||++++|+|... ..++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~ 85 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL 85 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence 4567778899999999999985 3443 47889887655444456789999999999999999999999764 4678
Q ss_pred EEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecc
Q 003278 588 IYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAE 667 (834)
Q Consensus 588 v~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~ 667 (834)
++||+++|+|.+++.... ..+++..++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++
T Consensus 86 v~e~~~~g~l~~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dikp~Nill~~~~~~kL~Dfg~~~ 157 (303)
T cd05110 86 VTQLMPHGCLLDYVHEHK-----DNIGSQLLLNWCVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLAR 157 (303)
T ss_pred eehhcCCCCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHhh---cCeeccccccceeeecCCCceEEccccccc
Confidence 999999999999886532 237888899999999999999996 699999999999999999999999999998
Q ss_pred ccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhc
Q 003278 668 FLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARK 746 (834)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~ 746 (834)
........ .......++..|||||++.+..++.++|||||||++|||+| |+.|+..... ......+ ...
T Consensus 158 ~~~~~~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~-~~~~~~~----~~~ 227 (303)
T cd05110 158 LLEGDEKE-----YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT-REIPDLL----EKG 227 (303)
T ss_pred cccCcccc-----cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHH----HCC
Confidence 65432110 11122346778999999998899999999999999999998 8888754321 1111111 111
Q ss_pred CccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccC
Q 003278 747 RPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGN 797 (834)
Q Consensus 747 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~ 797 (834)
... . ...... ..+..++..||..+|++||+|.+|++.|+..
T Consensus 228 ~~~---~---~~~~~~----~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~ 268 (303)
T cd05110 228 ERL---P---QPPICT----IDVYMVMVKCWMIDADSRPKFKELAAEFSRM 268 (303)
T ss_pred CCC---C---CCCCCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 100 0 001111 2456677799999999999999999998764
No 395
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=7.7e-36 Score=320.37 Aligned_cols=258 Identities=21% Similarity=0.331 Sum_probs=195.9
Q ss_pred CcCcCCcccccCCcEEEEEEEC------CCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEE
Q 003278 514 NFSESQRVAEMDFGTAYQGFLD------NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLV 587 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~l 587 (834)
++.-..+||+|+||.||++... ++..+|+|.+... .......|.+|++++++++||||+++++++.+.+..++
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 6 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred hceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC-CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 4555678999999999999642 3457889987643 33445689999999999999999999999999999999
Q ss_pred EEeccCCCchhhhhhcCCC---------CCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCc
Q 003278 588 IYDYSATRILSHLLFHNNH---------RIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNP 658 (834)
Q Consensus 588 v~Ey~~~g~L~~~l~~~~~---------~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ 658 (834)
+|||+++|+|.+++..... ......++|..++.++.|++.||+|||+ .+|+||||||+|||+++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS---LHFVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH---CCeecccccHhhEEEcCCCCE
Confidence 9999999999999875421 1112348899999999999999999996 699999999999999999999
Q ss_pred eEeeeeeccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHH
Q 003278 659 RLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVK 737 (834)
Q Consensus 659 ki~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~ 737 (834)
||+|||++........ ........+++.|+|||++.+..++.++|||||||++|||+| |..|+....... ...
T Consensus 162 kL~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-~~~ 235 (280)
T cd05092 162 KIGDFGMSRDIYSTDY-----YRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE-AIE 235 (280)
T ss_pred EECCCCceeEcCCCce-----eecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH-HHH
Confidence 9999999975432211 000112345788999999998999999999999999999999 888875332221 111
Q ss_pred HHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHc
Q 003278 738 RVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795 (834)
Q Consensus 738 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~ 795 (834)
.. .... .. ...... +.. +.+++.+||+.||.+||++.+|.+.|+
T Consensus 236 ~~---~~~~-~~------~~~~~~-~~~---~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 236 CI---TQGR-EL------ERPRTC-PPE---VYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred HH---HcCc-cC------CCCCCC-CHH---HHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 11 1111 10 001111 223 445666999999999999999999886
No 396
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=9e-36 Score=327.32 Aligned_cols=243 Identities=15% Similarity=0.184 Sum_probs=186.0
Q ss_pred CcccccCCcEEEEEEE-CCCcEEEEEEecCCCC--hhHHHHHHHHHHHHHhc-cCCCceeEEEEEeeCCeEEEEEeccCC
Q 003278 519 QRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKC--PALRTRFSNELQNLARL-RHRNLVQLCGWCTEQGEMLVIYDYSAT 594 (834)
Q Consensus 519 ~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~--~~~~~~f~~E~~~l~~l-~HpNiv~l~g~~~~~~~~~lv~Ey~~~ 594 (834)
+.||+|+||.||+|.. .++..||||.+..... ....+.+.+|+.++.++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 3589999999999986 4578899999875422 23345688999999988 699999999999999999999999999
Q ss_pred CchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCC
Q 003278 595 RILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674 (834)
Q Consensus 595 g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~ 674 (834)
|+|..++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~~------~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~- 150 (327)
T cd05617 81 GDLMFHMQRQR------KLPEEHARFYAAEICIALNFLHE---RGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG- 150 (327)
T ss_pred CcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEeCCCCEEEeccccceeccCCC-
Confidence 99988876432 38899999999999999999997 699999999999999999999999999987422111
Q ss_pred CCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchh--HHHHHHHHHhhcCccccc
Q 003278 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGL--LVKRVHEFEARKRPLAEL 752 (834)
Q Consensus 675 ~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 752 (834)
......+||+.|||||++.+..++.++|||||||+||||+||+.||........ ........... .+.
T Consensus 151 ------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~--- 220 (327)
T cd05617 151 ------DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILE-KPI--- 220 (327)
T ss_pred ------CceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHh-CCC---
Confidence 112346799999999999999999999999999999999999999964322111 01111111111 111
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChh
Q 003278 753 VDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMR 788 (834)
Q Consensus 753 ~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~ 788 (834)
.++...+ .. +..++.+||..||++||++.
T Consensus 221 ---~~p~~~~-~~---~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 221 ---RIPRFLS-VK---ASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred ---CCCCCCC-HH---HHHHHHHHhccCHHHcCCCC
Confidence 1111112 23 34555689999999999853
No 397
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=5.2e-36 Score=317.80 Aligned_cols=253 Identities=27% Similarity=0.393 Sum_probs=196.1
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEcc
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYM 190 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 190 (834)
++|+..+.||+|+||.||+|... ++..||+|.+..... ..+.|.+|+.++++++|+||+++++++. .+..++||||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~ 82 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYM 82 (260)
T ss_pred HHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEec
Confidence 46788899999999999999884 677899999865432 3467999999999999999999999875 45689999999
Q ss_pred CCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhh
Q 003278 191 PNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEH 270 (834)
Q Consensus 191 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~ 270 (834)
++++|.+++.... ...+++.++..++.|++.||.|||+. +|+||||||+||++++++.++|+|||++..+..
T Consensus 83 ~~~~L~~~~~~~~-----~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~ 154 (260)
T cd05070 83 SKGSLLDFLKDGE-----GRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIED 154 (260)
T ss_pred CCCcHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccC
Confidence 9999999986532 24589999999999999999999985 899999999999999999999999999975432
Q ss_pred hhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCccchHHHH
Q 003278 271 ELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQIILLDW 349 (834)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~~l~~~ 349 (834)
... .......|+..|+|||.+... .++.++|||||||++|||+| |+.|+.... ......+
T Consensus 155 ~~~---------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~~l~~~g~~p~~~~~---~~~~~~~ 215 (260)
T cd05070 155 NEY---------------TARQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELVTKGRVPYPGMN---NREVLEQ 215 (260)
T ss_pred ccc---------------ccccCCCCCccccChHHHhcC-CCcchhhhHHHHHHHHHHHhcCCCCCCCCC---HHHHHHH
Confidence 110 001122356789999987644 67899999999999999999 888885422 1112221
Q ss_pred HHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhc
Q 003278 350 IRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSG 407 (834)
Q Consensus 350 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~ 407 (834)
+.. +... ... . .....+.+++..|+..+|.+||+|.++.+.|+.
T Consensus 216 ---~~~-~~~~-----~~~-~----~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 216 ---VER-GYRM-----PCP-Q----DCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred ---HHc-CCCC-----CCC-C----cCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 111 1000 010 1 112468899999999999999999999988763
No 398
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=8.4e-36 Score=316.35 Aligned_cols=254 Identities=26% Similarity=0.397 Sum_probs=190.6
Q ss_pred CeeeccCCeEEEEEEECC---CCeEEEEEEeccc-ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEe-CCEEEEEEEccC
Q 003278 117 EVLGSGGFGKVYRAVLPS---DGTVVAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVRLRGWCVH-EDQLLLVYDYMP 191 (834)
Q Consensus 117 ~~LG~G~fG~Vy~~~~~~---~g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~-~~~~~lV~Ey~~ 191 (834)
+.||+|+||.||+|.+.. ++..||+|.+... .....+.+.+|+.+++.++||||++++++|.. ++..++||||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 468999999999998643 3467999988543 23445678899999999999999999998764 556899999999
Q ss_pred CCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhh
Q 003278 192 NRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHE 271 (834)
Q Consensus 192 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 271 (834)
+|+|.+++.... ..+++..++.++.|+++||.|||+. +++||||||+|||+++++.+||+|||+++.+...
T Consensus 81 ~~~L~~~~~~~~------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~ 151 (262)
T cd05058 81 HGDLRNFIRSET------HNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDK 151 (262)
T ss_pred CCCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCC
Confidence 999999986532 2467788899999999999999985 9999999999999999999999999999754321
Q ss_pred hhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCc-cCCCCCCCccchHHHHH
Q 003278 272 LQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRR-AVDLTYPDDQIILLDWI 350 (834)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~-p~~~~~~~~~~~l~~~~ 350 (834)
... .........+++.|+|||++... .++.++|||||||++|||+||.. |+... ... ...
T Consensus 152 ~~~------------~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~~~~~~~~~~---~~~---~~~ 212 (262)
T cd05058 152 EYY------------SVHNHTGAKLPVKWMALESLQTQ-KFTTKSDVWSFGVLLWELMTRGAPPYPDV---DSF---DIT 212 (262)
T ss_pred cce------------eecccccCcCCccccChhHhccC-ccchHHHHHHHHHHHHHHHcCCCCCCCCC---CHH---HHH
Confidence 100 00011233467889999988654 57899999999999999999654 44321 111 112
Q ss_pred HHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcCC
Q 003278 351 RRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGSY 409 (834)
Q Consensus 351 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~~ 409 (834)
.... .+.... . .. .....+.+++..||+.+|++||++.+|++.|+..+
T Consensus 213 ~~~~-~~~~~~-----~-~~----~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 213 VYLL-QGRRLL-----Q-PE----YCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred HHHh-cCCCCC-----C-CC----cCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 2111 111100 0 01 11246889999999999999999999999987643
No 399
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=3.3e-36 Score=343.29 Aligned_cols=262 Identities=17% Similarity=0.222 Sum_probs=185.6
Q ss_pred hhCcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeC--------
Q 003278 512 TNNFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQ-------- 582 (834)
Q Consensus 512 t~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~-------- 582 (834)
+.+|...+.||+|+||.||+|.. .++..||||++.... ....+|+.+|++++|||||++++++...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 35677888999999999999986 457899999885432 2235699999999999999999876432
Q ss_pred CeEEEEEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCC-CceEe
Q 003278 583 GEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDM-NPRLG 661 (834)
Q Consensus 583 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~-~~ki~ 661 (834)
..+++||||+++ +|..++..... ....+++.....++.|++.||+|||+ .+|+||||||+||||+.++ .+||+
T Consensus 140 ~~l~lvmE~~~~-~l~~~~~~~~~--~~~~l~~~~~~~~~~qi~~gL~yLH~---~~IiHrDLKp~NILl~~~~~~vkL~ 213 (440)
T PTZ00036 140 IFLNVVMEFIPQ-TVHKYMKHYAR--NNHALPLFLVKLYSYQLCRALAYIHS---KFICHRDLKPQNLLIDPNTHTLKLC 213 (440)
T ss_pred eEEEEEEecCCc-cHHHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCcCHHHEEEcCCCCceeee
Confidence 246789999986 56555543221 11247888888999999999999997 6899999999999999664 79999
Q ss_pred eeeeccccccCCCCCcccccCccccccccCccchhccccC-CCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHH
Q 003278 662 SFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESG-EATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVH 740 (834)
Q Consensus 662 DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~-~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~ 740 (834)
|||+|+.+.... ......||+.|||||++.+. .++.++|||||||+||||+||..||....+...+.....
T Consensus 214 DFGla~~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~ 285 (440)
T PTZ00036 214 DFGSAKNLLAGQ--------RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQ 285 (440)
T ss_pred ccccchhccCCC--------CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence 999998653221 12245789999999998654 689999999999999999999999876544333222211
Q ss_pred HHHh--------hcCccccccccccC-----CCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 741 EFEA--------RKRPLAELVDLSLN-----GEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 741 ~~~~--------~~~~~~~~~d~~l~-----~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
.... ......++--+... ..++.....++..++.+||..||.+|||+.|+++
T Consensus 286 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 286 VLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred HhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 1000 00000000000000 0000001124556667999999999999999874
No 400
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=6.3e-36 Score=326.84 Aligned_cols=204 Identities=22% Similarity=0.399 Sum_probs=161.8
Q ss_pred CCeeeccCCeEEEEEEECC--CCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEe--CCEEEEEEEccC
Q 003278 116 DEVLGSGGFGKVYRAVLPS--DGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVH--EDQLLLVYDYMP 191 (834)
Q Consensus 116 ~~~LG~G~fG~Vy~~~~~~--~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~--~~~~~lV~Ey~~ 191 (834)
..+||+|+||.||+|.... ++..||+|.+.... ....+.+|+.++++++||||+++++++.. ....++||||++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 3689999999999999753 56789999986542 23457889999999999999999999864 457899999987
Q ss_pred CCCHhHHHhcCCC--ccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEE----CCCCceEEeeccch
Q 003278 192 NRSLDRVLFRRPE--NLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVML----DSQYNARLGDFGLA 265 (834)
Q Consensus 192 ~gsL~~~l~~~~~--~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl----d~~~~~kl~DFGla 265 (834)
+ +|.+++..... .......+++..+..++.|++.||.|||+. +|+||||||+|||+ +.++.+||+|||++
T Consensus 84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 84 H-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred C-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 5 67666643211 111234689999999999999999999985 99999999999999 45678999999999
Q ss_pred hhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCC
Q 003278 266 RWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLT 338 (834)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~ 338 (834)
+....... .........||+.|+|||.+.....++.++|||||||++|||+||+.||...
T Consensus 160 ~~~~~~~~-------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 160 RLFNSPLK-------------PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred eccCCCcc-------------cccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 86432210 0111234568999999999876556789999999999999999999998643
No 401
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=5.2e-36 Score=316.99 Aligned_cols=251 Identities=27% Similarity=0.420 Sum_probs=195.8
Q ss_pred CeeeccCCeEEEEEEECC-CC--eEEEEEEecccCh-hhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEccCC
Q 003278 117 EVLGSGGFGKVYRAVLPS-DG--TVVAVKCLAEKGE-RFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPN 192 (834)
Q Consensus 117 ~~LG~G~fG~Vy~~~~~~-~g--~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 192 (834)
+.||+|+||.||+|.+.. .+ ..||||.+..... ...+.|.+|+.++++++||||+++++++.. +..++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999999854 33 3699999876544 566789999999999999999999999988 889999999999
Q ss_pred CCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhh
Q 003278 193 RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHEL 272 (834)
Q Consensus 193 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~ 272 (834)
|+|.+++..... ..++|.....++.|++.||+|||+. +++||||||+|||++.++.+||+|||+++.+....
T Consensus 80 ~~L~~~l~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~ 151 (257)
T cd05040 80 GSLLDRLRKDAL-----GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNE 151 (257)
T ss_pred CcHHHHHHhccc-----ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccccccc
Confidence 999999875421 4689999999999999999999985 99999999999999999999999999998653321
Q ss_pred hhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCccchHHHHHH
Q 003278 273 QYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQIILLDWIR 351 (834)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~~l~~~~~ 351 (834)
.. ........|+..|+|||++... .++.++|||||||++|||+| |+.|+...... +...
T Consensus 152 ~~-------------~~~~~~~~~~~~y~~pE~~~~~-~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~------~~~~ 211 (257)
T cd05040 152 DH-------------YVMEEHLKVPFAWCAPESLRTR-TFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS------QILK 211 (257)
T ss_pred cc-------------eecccCCCCCceecCHHHhccc-CcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH------HHHH
Confidence 00 0011234578899999988654 57889999999999999999 99998532111 1111
Q ss_pred HHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhh
Q 003278 352 RLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVS 406 (834)
Q Consensus 352 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~ 406 (834)
.......... .. . .....+.+++..|++.+|.+||++.+|++.|.
T Consensus 212 ~~~~~~~~~~-----~~-~----~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 212 KIDKEGERLE-----RP-E----ACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred HHHhcCCcCC-----CC-c----cCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 1111111110 00 1 11246888999999999999999999998764
No 402
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=3.5e-36 Score=322.92 Aligned_cols=262 Identities=22% Similarity=0.303 Sum_probs=199.1
Q ss_pred CcCcCCcccccCCcEEEEEEEC-----CCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEee--CCeEE
Q 003278 514 NFSESQRVAEMDFGTAYQGFLD-----NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTE--QGEML 586 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~~-----~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~--~~~~~ 586 (834)
.|...+.||+|+||.||+|.+. .+..+|||.+.........+.|.+|++++++++||||+++++++.. ....+
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR 84 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence 3455578999999999999864 3578999998765444345789999999999999999999999887 55789
Q ss_pred EEEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeec
Q 003278 587 VIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALA 666 (834)
Q Consensus 587 lv~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla 666 (834)
++|||+++++|.+++..... .++|..+..++.|++.||+|||+ .+|+||||||+||+++.++.+|++|||++
T Consensus 85 lv~e~~~~~~l~~~l~~~~~-----~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 156 (284)
T cd05038 85 LIMEYLPSGSLRDYLQRHRD-----QINLKRLLLFSSQICKGMDYLGS---QRYIHRDLAARNILVESEDLVKISDFGLA 156 (284)
T ss_pred EEEecCCCCCHHHHHHhCcc-----ccCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcccccc
Confidence 99999999999999865432 48899999999999999999996 68999999999999999999999999999
Q ss_pred cccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchh----------HH
Q 003278 667 EFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGL----------LV 736 (834)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~----------~~ 736 (834)
.......... .......++..|+|||++.+..++.++||||||+++|||+||..|+........ ..
T Consensus 157 ~~~~~~~~~~----~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd05038 157 KVLPEDKDYY----YVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIV 232 (284)
T ss_pred cccccCCcce----eccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccH
Confidence 8754221100 011122455679999999988999999999999999999999988753221110 01
Q ss_pred HHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccC
Q 003278 737 KRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGN 797 (834)
Q Consensus 737 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~ 797 (834)
............. ..... ...++.+++.+||..+|++||||.+|+++|+.+
T Consensus 233 ~~~~~~~~~~~~~------~~~~~----~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 233 TRLLELLKEGERL------PRPPS----CPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHHHHHcCCcC------CCCcc----CCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 1111111100000 00011 113566777899999999999999999999865
No 403
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.1e-35 Score=314.44 Aligned_cols=248 Identities=28% Similarity=0.399 Sum_probs=194.8
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEe-CCEEEEEEEc
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVH-EDQLLLVYDY 189 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~-~~~~~lV~Ey 189 (834)
++|...+.||+|+||.||+|.. .|..||+|.+... ...+.|.+|+.++++++|+||+++++++.. .+..++||||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 81 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence 4688889999999999999987 4788999988643 235678999999999999999999998654 4578999999
Q ss_pred cCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhh
Q 003278 190 MPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLE 269 (834)
Q Consensus 190 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~ 269 (834)
+++|+|.+++.... ...++|..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 82 ~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~ 153 (256)
T cd05082 82 MAKGSLVDYLRSRG-----RSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 153 (256)
T ss_pred CCCCcHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceecc
Confidence 99999999986542 23588999999999999999999985 99999999999999999999999999987432
Q ss_pred hhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCccchHHH
Q 003278 270 HELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQIILLD 348 (834)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~~l~~ 348 (834)
.. .....++..|+|||++... .++.++|||||||++|||+| |+.|+.... +..
T Consensus 154 ~~-------------------~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~------~~~ 207 (256)
T cd05082 154 ST-------------------QDTGKLPVKWTAPEALREK-KFSTKSDVWSFGILLWEIYSFGRVPYPRIP------LKD 207 (256)
T ss_pred cc-------------------CCCCccceeecCHHHHccC-CCCchhhhHHHHHHHHHHHhCCCCCCCCCC------HHH
Confidence 11 1223356789999988654 67889999999999999998 888875321 112
Q ss_pred HHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhc
Q 003278 349 WIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSG 407 (834)
Q Consensus 349 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~ 407 (834)
...... .+.... .. . .....+.+++..|++.+|++||++.++++.|..
T Consensus 208 ~~~~~~-~~~~~~-----~~-~----~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 208 VVPRVE-KGYKMD-----AP-D----GCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred HHHHHh-cCCCCC-----CC-C----CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 222211 111110 10 0 112467889999999999999999999998864
No 404
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=3.4e-36 Score=330.46 Aligned_cols=244 Identities=17% Similarity=0.167 Sum_probs=186.0
Q ss_pred CcccccCCcEEEEEEE-CCCcEEEEEEecCCC--ChhHHHHHHHHHH-HHHhccCCCceeEEEEEeeCCeEEEEEeccCC
Q 003278 519 QRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSK--CPALRTRFSNELQ-NLARLRHRNLVQLCGWCTEQGEMLVIYDYSAT 594 (834)
Q Consensus 519 ~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~f~~E~~-~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~~ 594 (834)
+.||+|+||.||+|.. .+++.+|||.+.... .......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 3589999999999985 568899999986432 1222345555654 56789999999999999999999999999999
Q ss_pred CchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCC
Q 003278 595 RILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674 (834)
Q Consensus 595 g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~ 674 (834)
|+|..++.... .+++.....++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++.....
T Consensus 81 ~~L~~~l~~~~------~~~~~~~~~~~~qi~~al~~lH~---~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~-- 149 (325)
T cd05604 81 GELFFHLQRER------SFPEPRARFYAAEIASALGYLHS---INIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ-- 149 (325)
T ss_pred CCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEeecCCcccCCCC--
Confidence 99988876432 37888888999999999999996 69999999999999999999999999998753211
Q ss_pred CCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCccccccc
Q 003278 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVD 754 (834)
Q Consensus 675 ~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 754 (834)
........||+.|||||++.++.++.++|||||||++|||+||+.||....... +..... . ...
T Consensus 150 -----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~-~~~~~~---~--~~~----- 213 (325)
T cd05604 150 -----SDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAE-MYDNIL---H--KPL----- 213 (325)
T ss_pred -----CCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHH-HHHHHH---c--CCc-----
Confidence 111234679999999999999999999999999999999999999986543221 111111 1 110
Q ss_pred cccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHH
Q 003278 755 LSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSIL 794 (834)
Q Consensus 755 ~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L 794 (834)
.+..... . .+..+..+|++.+|.+||++++.++.+
T Consensus 214 -~~~~~~~-~---~~~~ll~~ll~~~p~~R~~~~~~~~~i 248 (325)
T cd05604 214 -VLRPGAS-L---TAWSILEELLEKDRQRRLGAKEDFLEI 248 (325)
T ss_pred -cCCCCCC-H---HHHHHHHHHhccCHHhcCCCCCCHHHH
Confidence 0111111 2 344555689999999999987544433
No 405
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=3.4e-36 Score=332.95 Aligned_cols=262 Identities=25% Similarity=0.268 Sum_probs=194.9
Q ss_pred hcCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC--hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeC------
Q 003278 109 GSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG--ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHE------ 180 (834)
Q Consensus 109 ~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~------ 180 (834)
..++|...+.||+|+||.||+|....++..||||++.... ....+.+.+|+.++++++||||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 3467999999999999999999998899999999986532 22345677899999999999999999988643
Q ss_pred CEEEEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEe
Q 003278 181 DQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLG 260 (834)
Q Consensus 181 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~ 260 (834)
...++++|++ +++|..++.. ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~~--------~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~ 160 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVKC--------QKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRIL 160 (343)
T ss_pred CcEEEEeecC-CCCHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEc
Confidence 3579999987 7899887742 3588999999999999999999985 99999999999999999999999
Q ss_pred eccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCC
Q 003278 261 DFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340 (834)
Q Consensus 261 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~ 340 (834)
|||+++..... .+...||+.|+|||.+.....++.++|||||||++|||++|+.||.....
T Consensus 161 Dfg~~~~~~~~-------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~ 221 (343)
T cd07878 161 DFGLARQADDE-------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDY 221 (343)
T ss_pred CCccceecCCC-------------------cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCH
Confidence 99999753211 23346899999999987655678999999999999999999999864321
Q ss_pred CccchHHHHHHHH-----------hhcC--ccccccccccCCCCCC---HHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 341 DDQIILLDWIRRL-----------SDEG--KVLQAGDNRLSDGSYK---LCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 341 ~~~~~l~~~~~~~-----------~~~~--~~~~~~d~~l~~~~~~---~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
.+ .+..+.... .... ...... +........ ......+.+++..|++.||.+||++.++++.
T Consensus 222 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 222 ID--QLKRIMEVVGTPSPEVLKKISSEHARKYIQSL-PHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred HH--HHHHHHHHhCCCCHHHHHhcchhhHHHHhhcc-ccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 11 111111000 0000 000000 000000000 0001246789999999999999999999863
No 406
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=8.6e-36 Score=322.79 Aligned_cols=249 Identities=20% Similarity=0.313 Sum_probs=196.2
Q ss_pred hCcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEec
Q 003278 513 NNFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY 591 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey 591 (834)
..|...+.||+|+||.||+|.. .++..|++|.+....... .+.+.+|+.+++.++||||+++++++......++||||
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~-~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~ 98 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK-KELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcch-HHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence 3566677899999999999985 568899999887554333 36688999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccccc
Q 003278 592 SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTR 671 (834)
Q Consensus 592 ~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~ 671 (834)
+++++|..++... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++.....
T Consensus 99 ~~~~~L~~~~~~~-------~~~~~~~~~i~~ql~~aL~~LH~---~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~ 168 (296)
T cd06654 99 LAGGSLTDVVTET-------CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 168 (296)
T ss_pred cCCCCHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEECccccchhccc
Confidence 9999999988532 36788899999999999999996 6899999999999999999999999999875432
Q ss_pred CCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCcccc
Q 003278 672 NDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAE 751 (834)
Q Consensus 672 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (834)
.. .......|++.|+|||++.+..++.++|||||||++|||+||+.||....+...... ......+ .
T Consensus 169 ~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~----~~~~~~~--~ 235 (296)
T cd06654 169 EQ-------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL----IATNGTP--E 235 (296)
T ss_pred cc-------cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHH----HhcCCCC--C
Confidence 21 111234688999999999988899999999999999999999999865443222111 1111110 0
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 752 LVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 752 ~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
+.. .... ...+.+++.+||..+|++|||+.+|++
T Consensus 236 ~~~---~~~~----~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 236 LQN---PEKL----SAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred CCC---cccc----CHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 000 0111 123556667999999999999999996
No 407
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=9e-36 Score=319.62 Aligned_cols=265 Identities=20% Similarity=0.340 Sum_probs=203.6
Q ss_pred hcCCCCCCCeeeccCCeEEEEEEECC----CCeEEEEEEeccc-ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEe-CCE
Q 003278 109 GSNGFDEDEVLGSGGFGKVYRAVLPS----DGTVVAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVRLRGWCVH-EDQ 182 (834)
Q Consensus 109 ~t~~f~~~~~LG~G~fG~Vy~~~~~~----~g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~-~~~ 182 (834)
..++|...++||+|+||.||+|.+.. .+..||+|.+... .....+.+.+|+.++++++||||+++++++.. .+.
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 45678889999999999999999864 2688999988654 33445678899999999999999999999876 467
Q ss_pred EEEEEEccCCCCHhHHHhcCCCc-cccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEee
Q 003278 183 LLLVYDYMPNRSLDRVLFRRPEN-LEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGD 261 (834)
Q Consensus 183 ~~lV~Ey~~~gsL~~~l~~~~~~-~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~D 261 (834)
.++++||+++|+|..++...... ......+++.++..++.|++.||+|||+. +++||||||+|||+++++.+||+|
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEECC
Confidence 89999999999999998654211 11125689999999999999999999985 999999999999999999999999
Q ss_pred ccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCC
Q 003278 262 FGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYP 340 (834)
Q Consensus 262 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~ 340 (834)
||+++.+...... .......++..|+|||++... .++.++|||||||++||++| |+.|+....+
T Consensus 161 ~g~~~~~~~~~~~--------------~~~~~~~~~~~y~apE~~~~~-~~~~~~Di~slG~~l~el~~~g~~p~~~~~~ 225 (280)
T cd05043 161 NALSRDLFPMDYH--------------CLGDNENRPVKWMALESLVNK-EYSSASDVWSFGVLLWELMTLGQTPYVEIDP 225 (280)
T ss_pred CCCcccccCCceE--------------EeCCCCCcchhccCHHHHhcC-CCCchhhHHHhHHHHHHHhcCCCCCcCcCCH
Confidence 9999854321100 001123467889999988654 57899999999999999999 9998864321
Q ss_pred CccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcC
Q 003278 341 DDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGS 408 (834)
Q Consensus 341 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~ 408 (834)
..+..++. . +.... .+ ......+.+++.+||..+|++||++.+|++.|+..
T Consensus 226 ---~~~~~~~~---~-~~~~~--~~--------~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~ 276 (280)
T cd05043 226 ---FEMAAYLK---D-GYRLA--QP--------INCPDELFAVMACCWALDPEERPSFSQLVQCLTDF 276 (280)
T ss_pred ---HHHHHHHH---c-CCCCC--CC--------CcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 12222221 1 11100 00 01124678999999999999999999999998753
No 408
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=3.5e-36 Score=320.54 Aligned_cols=255 Identities=26% Similarity=0.392 Sum_probs=194.9
Q ss_pred CeeeccCCeEEEEEEECCCC------eEEEEEEecccC-hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEc
Q 003278 117 EVLGSGGFGKVYRAVLPSDG------TVVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDY 189 (834)
Q Consensus 117 ~~LG~G~fG~Vy~~~~~~~g------~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 189 (834)
+.||+|+||.||+|.....+ ..||||.+.... ......|.+|+.+++.++||||++++++|...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 46999999999999875433 689999876432 23456789999999999999999999999999999999999
Q ss_pred cCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCC-----ceEEeeccc
Q 003278 190 MPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQY-----NARLGDFGL 264 (834)
Q Consensus 190 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~-----~~kl~DFGl 264 (834)
+++|+|.+++............++|.+++.++.|++.||+|||+. +++|+||||+|||++.+. .+||+|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 999999999975432211234589999999999999999999985 899999999999999877 899999999
Q ss_pred hhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCcc
Q 003278 265 ARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQ 343 (834)
Q Consensus 265 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~ 343 (834)
++.+...... .......++..|+|||++..+ .++.++|||||||++|||+| |+.|+.... .
T Consensus 158 ~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~ellt~g~~p~~~~~---~ 219 (269)
T cd05044 158 ARDIYKSDYY--------------RKEGEGLLPVRWMAPESLLDG-KFTTQSDVWSFGVLMWEILTLGQQPYPALN---N 219 (269)
T ss_pred cccccccccc--------------ccCcccCCCccccCHHHHccC-CcccchhHHHHHHHHHHHHHcCCCCCcccC---H
Confidence 9754321100 001122357889999998765 57999999999999999998 998875321 1
Q ss_pred chHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhh
Q 003278 344 IILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVS 406 (834)
Q Consensus 344 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~ 406 (834)
......+ ..+.... . . ......+.+++.+||+.+|.+||+|.+|.+.|+
T Consensus 220 ~~~~~~~----~~~~~~~-----~--~---~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 220 QEVLQHV----TAGGRLQ-----K--P---ENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred HHHHHHH----hcCCccC-----C--c---ccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 1111111 1111110 0 0 011246789999999999999999999999875
No 409
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1.2e-35 Score=318.82 Aligned_cols=263 Identities=27% Similarity=0.409 Sum_probs=200.8
Q ss_pred CCCCCCeeeccCCeEEEEEEECC----CCeEEEEEEecccChh-hHHHHHHHHHHHHhCCCCceeeEeeeEEe--CCEEE
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPS----DGTVVAVKCLAEKGER-FEKTFAAELVAVAHLRHRNLVRLRGWCVH--EDQLL 184 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~----~g~~vAvK~l~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~g~~~~--~~~~~ 184 (834)
.|...+.||+|+||.||+|.+.. ++..||||.+...... ..+.|.+|+.+++.++||||+++++++.. ....+
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR 84 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence 46677899999999999998743 4789999998765443 56789999999999999999999999987 55799
Q ss_pred EEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccc
Q 003278 185 LVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGL 264 (834)
Q Consensus 185 lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 264 (834)
+||||+++++|.+++.... ..++|..+..++.|++.||+|||+. +++||||||+|||++.++.++|+|||+
T Consensus 85 lv~e~~~~~~l~~~l~~~~------~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~ 155 (284)
T cd05038 85 LIMEYLPSGSLRDYLQRHR------DQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGL 155 (284)
T ss_pred EEEecCCCCCHHHHHHhCc------cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEccccc
Confidence 9999999999999996542 2589999999999999999999985 999999999999999999999999999
Q ss_pred hhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccc
Q 003278 265 ARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQI 344 (834)
Q Consensus 265 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~ 344 (834)
+......... ........++..|+|||.+... .++.++|||||||+++||+||+.|+.........
T Consensus 156 ~~~~~~~~~~-------------~~~~~~~~~~~~~~~Pe~~~~~-~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~ 221 (284)
T cd05038 156 AKVLPEDKDY-------------YYVKEPGESPIFWYAPECLRTS-KFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLR 221 (284)
T ss_pred ccccccCCcc-------------eeccCCCCCcccccCcHHHccC-CCCcccchHHHhhhhheeeccCCCcccccchhcc
Confidence 9865321100 0001122356679999988655 6788999999999999999999987543221100
Q ss_pred ---------hHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcC
Q 003278 345 ---------ILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGS 408 (834)
Q Consensus 345 ---------~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~ 408 (834)
....+.. ....+.. .. . .......+.+++.+||+.+|.+||+|.+|+++|...
T Consensus 222 ~~~~~~~~~~~~~~~~-~~~~~~~-------~~--~-~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 222 MIGIAQGQMIVTRLLE-LLKEGER-------LP--R-PPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred ccccccccccHHHHHH-HHHcCCc-------CC--C-CccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 0111111 1111110 00 0 011124688999999999999999999999998753
No 410
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=2.6e-36 Score=319.96 Aligned_cols=239 Identities=21% Similarity=0.338 Sum_probs=182.9
Q ss_pred cccccCCcEEEEEEECC-C-------cEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEec
Q 003278 520 RVAEMDFGTAYQGFLDN-H-------QYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY 591 (834)
Q Consensus 520 ~ig~g~~g~vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey 591 (834)
.||.|+||.||+|.... + ..|++|.+.... ....+.|.+|+.+++.++|||||++++++...+..++||||
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH-RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchh-HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 58999999999998632 2 247788765332 23346788999999999999999999999998899999999
Q ss_pred cCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCC--------ceEeee
Q 003278 592 SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMN--------PRLGSF 663 (834)
Q Consensus 592 ~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~--------~ki~Df 663 (834)
+++|+|..++..... .++|..++.++.|++.||+|||+ .+|+||||||+|||++.++. +|++||
T Consensus 81 ~~~g~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~ 152 (258)
T cd05078 81 VKFGSLDTYLKKNKN-----LINISWKLEVAKQLAWALHFLED---KGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDP 152 (258)
T ss_pred CCCCcHHHHHhcCCC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEEecccccccCCCceEEeccc
Confidence 999999999875432 47888999999999999999996 69999999999999988766 488888
Q ss_pred eeccccccCCCCCcccccCccccccccCccchhcccc-CCCCccCcchhhHHHHHHHHhCC-CccCCCCCchhHHHHHHH
Q 003278 664 ALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIES-GEATSMADVYSFGVVVLEVVTGQ-MAVDFRLPEGLLVKRVHE 741 (834)
Q Consensus 664 Gla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~~~k~DV~SfGvvl~E~~tG~-~p~~~~~~~~~~~~~~~~ 741 (834)
|++..... .....|+..|||||++.+ ..++.++|||||||++|||++|. .|+....+... ..
T Consensus 153 g~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~-----~~ 216 (258)
T cd05078 153 GISITVLP-----------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK-----LQ 216 (258)
T ss_pred ccccccCC-----------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH-----HH
Confidence 88754221 123568889999999976 45799999999999999999995 44432222111 01
Q ss_pred HHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHc
Q 003278 742 FEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795 (834)
Q Consensus 742 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~ 795 (834)
....... ++... ...+.+++.+||+.||++|||+++|++.|+
T Consensus 217 ~~~~~~~--------~~~~~----~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 217 FYEDRHQ--------LPAPK----WTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred HHHcccc--------CCCCC----cHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 1111111 11111 124566777999999999999999999874
No 411
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=7.7e-36 Score=323.15 Aligned_cols=264 Identities=22% Similarity=0.265 Sum_probs=198.1
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC-----hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEE
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG-----ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLV 186 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~-----~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 186 (834)
+|+..+.||+|+||.||+|....+|+.||||.+.... ......+..|+.++++++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 3777889999999999999998889999999986542 22345677899999999999999999999999999999
Q ss_pred EEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchh
Q 003278 187 YDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266 (834)
Q Consensus 187 ~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 266 (834)
|||+ +|+|.+++.... ..++|..+..++.|+++||.|||+. +|+|+||||+|||++.++.+||+|||+++
T Consensus 81 ~e~~-~~~L~~~i~~~~------~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~ 150 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS------IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLAR 150 (298)
T ss_pred Eccc-CCCHHHHHhccC------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeee
Confidence 9999 999999986431 3689999999999999999999986 99999999999999999999999999997
Q ss_pred hhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchH
Q 003278 267 WLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346 (834)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l 346 (834)
...... ...+...+++.|+|||.+.....++.++|||||||++|||++|..++......+ .+
T Consensus 151 ~~~~~~----------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~--~~ 212 (298)
T cd07841 151 SFGSPN----------------RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDID--QL 212 (298)
T ss_pred eccCCC----------------ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHH--HH
Confidence 543210 001223468899999988655567889999999999999999977775432211 11
Q ss_pred HHHHHHHh--------hcCccccccccccCCCCCC-----HHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 347 LDWIRRLS--------DEGKVLQAGDNRLSDGSYK-----LCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 347 ~~~~~~~~--------~~~~~~~~~d~~l~~~~~~-----~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
........ .............. ...+ ......+.+++..||+.+|.+||++.+|++.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 213 GKIFEALGTPTEENWPGVTSLPDYVEFKPF-PPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred HHHHHHcCCCchhhhhhccccccccccccc-CCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 01000000 00000000000000 0000 1113467899999999999999999999873
No 412
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-36 Score=317.82 Aligned_cols=258 Identities=17% Similarity=0.253 Sum_probs=189.3
Q ss_pred hhCcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCCC---------hhH----HHHHHHHHHHHHhccCCCceeEEE
Q 003278 512 TNNFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKC---------PAL----RTRFSNELQNLARLRHRNLVQLCG 577 (834)
Q Consensus 512 t~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~---------~~~----~~~f~~E~~~l~~l~HpNiv~l~g 577 (834)
-+.|.-...||.|.||.|-+|.. .+++.||||++..... +.. .++..+||.+|++++|||||+|+.
T Consensus 96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiE 175 (576)
T KOG0585|consen 96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIE 175 (576)
T ss_pred hhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEE
Confidence 36677788899999999999984 5689999999864321 111 257889999999999999999999
Q ss_pred EEeeC--CeEEEEEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCC
Q 003278 578 WCTEQ--GEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPD 655 (834)
Q Consensus 578 ~~~~~--~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~ 655 (834)
+-.+. +.+|||+|||..|.+...= .....|...+..++++++..||+|||. ++||||||||+|+||+++
T Consensus 176 vLDDP~s~~~YlVley~s~G~v~w~p------~d~~els~~~Ar~ylrDvv~GLEYLH~---QgiiHRDIKPsNLLl~~~ 246 (576)
T KOG0585|consen 176 VLDDPESDKLYLVLEYCSKGEVKWCP------PDKPELSEQQARKYLRDVVLGLEYLHY---QGIIHRDIKPSNLLLSSD 246 (576)
T ss_pred eecCcccCceEEEEEeccCCccccCC------CCcccccHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEEcCC
Confidence 88754 6799999999999885431 111228888889999999999999996 799999999999999999
Q ss_pred CCceEeeeeeccccccCCCCCcccccCccccccccCccchhccccCC---C-CccCcchhhHHHHHHHHhCCCccCCCCC
Q 003278 656 MNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGE---A-TSMADVYSFGVVVLEVVTGQMAVDFRLP 731 (834)
Q Consensus 656 ~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~---~-~~k~DV~SfGvvl~E~~tG~~p~~~~~~ 731 (834)
+++||+|||.+-........... .......||+++||||...++. + +.+.||||+||+||-|+-|+.||.....
T Consensus 247 g~VKIsDFGVs~~~~~~~~~~~d--~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~ 324 (576)
T KOG0585|consen 247 GTVKISDFGVSNEFPQGSDEGSD--DQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE 324 (576)
T ss_pred CcEEeeccceeeecccCCccccH--HHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH
Confidence 99999999999765332111111 1112358999999999987743 3 3568999999999999999999964332
Q ss_pred chhHHHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHH
Q 003278 732 EGLLVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSIL 794 (834)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L 794 (834)
.... ..+. ..++ .-...++.-..+-.|+++.++.||++|-+..+|....
T Consensus 325 ~~l~-~KIv-----n~pL--------~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hp 373 (576)
T KOG0585|consen 325 LELF-DKIV-----NDPL--------EFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHP 373 (576)
T ss_pred HHHH-HHHh-----cCcc--------cCCCcccccHHHHHHHHHHhhcChhheeehhhheecc
Confidence 1111 1110 1111 1111111223344455578889999999999997644
No 413
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.4e-35 Score=315.85 Aligned_cols=252 Identities=25% Similarity=0.378 Sum_probs=192.5
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC-----hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeC--CEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG-----ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHE--DQL 183 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~-----~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~--~~~ 183 (834)
++|+..+.||+|+||.||+|....++..||+|.+.... ....+.+.+|+.++++++||||+++++++.+. +..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 57899999999999999999998889999999875321 22345688999999999999999999988763 578
Q ss_pred EEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeecc
Q 003278 184 LLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFG 263 (834)
Q Consensus 184 ~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 263 (834)
+++|||+++++|.+++... ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 82 ~l~~e~~~~~~L~~~l~~~-------~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg 151 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAY-------GALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFG 151 (266)
T ss_pred EEEEeCCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCC
Confidence 9999999999999998642 3578899999999999999999985 99999999999999999999999999
Q ss_pred chhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCcc
Q 003278 264 LARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQ 343 (834)
Q Consensus 264 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~ 343 (834)
+++.+..... .........|+..|+|||++.. ..++.++|||||||++|||+||+.||......
T Consensus 152 ~~~~~~~~~~-------------~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~-- 215 (266)
T cd06651 152 ASKRLQTICM-------------SGTGIRSVTGTPYWMSPEVISG-EGYGRKADVWSLGCTVVEMLTEKPPWAEYEAM-- 215 (266)
T ss_pred Cccccccccc-------------cCCccccCCccccccCHHHhCC-CCCCchhhhHHHHHHHHHHHHCCCCccccchH--
Confidence 9875422100 0001223458999999998864 46789999999999999999999998643111
Q ss_pred chHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHH
Q 003278 344 IILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIE 403 (834)
Q Consensus 344 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~ 403 (834)
..+....... ..+.+. ......+..+ +.||..+|++||+|.+|+.
T Consensus 216 ----~~~~~~~~~~-----~~~~~~-----~~~~~~~~~l-i~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 216 ----AAIFKIATQP-----TNPQLP-----SHISEHARDF-LGCIFVEARHRPSAEELLR 260 (266)
T ss_pred ----HHHHHHhcCC-----CCCCCc-----hhcCHHHHHH-HHHhcCChhhCcCHHHHhc
Confidence 1111111111 111111 1111223344 4799999999999999975
No 414
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=7.3e-36 Score=315.97 Aligned_cols=238 Identities=24% Similarity=0.365 Sum_probs=184.8
Q ss_pred CcccccCCcEEEEEEECCCc-----------EEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEE
Q 003278 519 QRVAEMDFGTAYQGFLDNHQ-----------YVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLV 587 (834)
Q Consensus 519 ~~ig~g~~g~vy~~~~~~~~-----------~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~l 587 (834)
+.||+|+||.||+|...+.. .|++|.+...... ...|.+|+.++++++||||++++|+|.. +..++
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~l 77 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD--SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIM 77 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh--HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEE
Confidence 35899999999999975433 4777876543322 5679999999999999999999999988 77899
Q ss_pred EEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCC-------CceE
Q 003278 588 IYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDM-------NPRL 660 (834)
Q Consensus 588 v~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~-------~~ki 660 (834)
||||+++|+|..++..... .+++..++.++.|++.||+|||+ .+|+||||||+|||++.++ .+|+
T Consensus 78 v~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dlkp~Nill~~~~~~~~~~~~~kl 149 (259)
T cd05037 78 VEEYVKFGPLDVFLHREKN-----NVSLHWKLDVAKQLASALHYLED---KKLVHGNVCGKNILVARYGLNEGYVPFIKL 149 (259)
T ss_pred EEEcCCCCcHHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHhh---CCeecccCccceEEEecCccccCCceeEEe
Confidence 9999999999999875432 47888899999999999999996 6999999999999999888 7999
Q ss_pred eeeeeccccccCCCCCcccccCccccccccCccchhccccC--CCCccCcchhhHHHHHHHHhC-CCccCCCCCchhHHH
Q 003278 661 GSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESG--EATSMADVYSFGVVVLEVVTG-QMAVDFRLPEGLLVK 737 (834)
Q Consensus 661 ~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~--~~~~k~DV~SfGvvl~E~~tG-~~p~~~~~~~~~~~~ 737 (834)
+|||++..... .....|+..|+|||++... .++.++|||||||++|||++| ..|+....+...
T Consensus 150 ~Dfg~a~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~--- 215 (259)
T cd05037 150 SDPGIPITVLS-----------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEK--- 215 (259)
T ss_pred CCCCccccccc-----------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhH---
Confidence 99999975432 1123567789999999876 789999999999999999995 666543322111
Q ss_pred HHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHc
Q 003278 738 RVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795 (834)
Q Consensus 738 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~ 795 (834)
.... .. .. .... ... ..+.+++.+||..+|++|||+.+|++.|+
T Consensus 216 -~~~~-~~-~~--~~~~------~~~---~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 216 -ERFY-QD-QH--RLPM------PDC---AELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred -HHHH-hc-CC--CCCC------CCc---hHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0001 10 00 0000 011 35666777999999999999999999874
No 415
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=5e-36 Score=333.24 Aligned_cols=265 Identities=23% Similarity=0.244 Sum_probs=194.3
Q ss_pred hcCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc--ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCC-----
Q 003278 109 GSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK--GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHED----- 181 (834)
Q Consensus 109 ~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~----- 181 (834)
..++|...+.||+|+||.||++....+++.||||.+... .....+.+.+|+.+++.++||||+++++++...+
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 346799999999999999999999888999999998643 2334567889999999999999999999886543
Q ss_pred -EEEEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEe
Q 003278 182 -QLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLG 260 (834)
Q Consensus 182 -~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~ 260 (834)
..++||||+++ +|...+. ..+++..+..++.|+++||.|||+. +|+||||||+|||++.++.+||+
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~---------~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~ 161 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQ---------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKIL 161 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHh---------hcCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEe
Confidence 57999999975 5666553 2478889999999999999999985 99999999999999999999999
Q ss_pred eccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCC
Q 003278 261 DFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340 (834)
Q Consensus 261 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~ 340 (834)
|||+++...... ......||+.|+|||.+... .++.++|||||||++|||++|+.||.....
T Consensus 162 Dfg~~~~~~~~~-----------------~~~~~~~t~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~ 223 (355)
T cd07874 162 DFGLARTAGTSF-----------------MMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDY 223 (355)
T ss_pred eCcccccCCCcc-----------------ccCCccccCCccCHHHHcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 999997532110 12334689999999988644 678999999999999999999999864321
Q ss_pred Cccch-HH---------------HHHHHHhhc-Ccccccccccc-CC------CCCCHHHHHHHHHHHHHhcccCCCCCC
Q 003278 341 DDQII-LL---------------DWIRRLSDE-GKVLQAGDNRL-SD------GSYKLCDMEHLTHLALLCTLHNPHLRP 396 (834)
Q Consensus 341 ~~~~~-l~---------------~~~~~~~~~-~~~~~~~d~~l-~~------~~~~~~~~~~l~~l~~~Cl~~~p~~RP 396 (834)
.+... .. ..+...... ........+.. .+ ..........+.+++..|++.||++||
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rp 303 (355)
T cd07874 224 IDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 303 (355)
T ss_pred HHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcC
Confidence 11000 00 000000000 00000000000 00 000111124578999999999999999
Q ss_pred chhhHHHH
Q 003278 397 SMKWVIEA 404 (834)
Q Consensus 397 sm~~V~~~ 404 (834)
|+.|+++.
T Consensus 304 s~~ell~h 311 (355)
T cd07874 304 SVDEALQH 311 (355)
T ss_pred CHHHHhcC
Confidence 99999874
No 416
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.2e-35 Score=319.05 Aligned_cols=261 Identities=23% Similarity=0.378 Sum_probs=202.7
Q ss_pred cHHHHHhhcCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhC-CCCceeeEeeeEEe-
Q 003278 102 SYAELYIGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHL-RHRNLVRLRGWCVH- 179 (834)
Q Consensus 102 ~~~el~~~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~- 179 (834)
++.++..+.+.|+..+.||+|+||.||+|.+..+++.||+|.+.... .....+..|+.++.++ +||||+++++++..
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 55666667788999999999999999999998899999999886542 3345688899999998 79999999999863
Q ss_pred -----CCEEEEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCC
Q 003278 180 -----EDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQ 254 (834)
Q Consensus 180 -----~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~ 254 (834)
.+..++||||+++|+|.+++.... ...+++..+..++.|+++||.|||+. +|+||||||+||+++.+
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~ 157 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTK-----GNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTEN 157 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHcc-----CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCC
Confidence 457899999999999999986532 23578888999999999999999986 99999999999999999
Q ss_pred CceEEeeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCcccccc----CCCCCcccceeehhhHHHHHHh
Q 003278 255 YNARLGDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQK----GSVATAKSDVFSFGIVVLEVVS 330 (834)
Q Consensus 255 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~----~~~~~~ksDV~SfGvvl~Ellt 330 (834)
+.++|+|||+++...... .......|++.|+|||.+.. ...++.++|||||||++|||+|
T Consensus 158 ~~~~l~dfg~~~~~~~~~----------------~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~ 221 (282)
T cd06636 158 AEVKLVDFGVSAQLDRTV----------------GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAE 221 (282)
T ss_pred CCEEEeeCcchhhhhccc----------------cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHh
Confidence 999999999987542110 01233568999999998752 2356789999999999999999
Q ss_pred CCccCCCCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHH
Q 003278 331 GRRAVDLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIE 403 (834)
Q Consensus 331 G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~ 403 (834)
|+.||....+..... . +.....+.+....++ ..+.+++..||+.||.+||++.++++
T Consensus 222 g~~p~~~~~~~~~~~------~------~~~~~~~~~~~~~~~----~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 222 GAPPLCDMHPMRALF------L------IPRNPPPKLKSKKWS----KKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred CCCCccccCHHhhhh------h------HhhCCCCCCcccccC----HHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 999985432111100 0 000111111111122 35788999999999999999999875
No 417
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.4e-35 Score=313.84 Aligned_cols=247 Identities=21% Similarity=0.320 Sum_probs=192.0
Q ss_pred CcCcCCcccccCCcEEEEEEECCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEe-eCCeEEEEEecc
Q 003278 514 NFSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCT-EQGEMLVIYDYS 592 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~-~~~~~~lv~Ey~ 592 (834)
+|...+.||+|+||.||+|... +..||+|.+.... ..+.|.+|+.++++++||||++++|++. +....+++|||+
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 7 ELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred hCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc---hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence 5666788999999999999875 5678999876432 2457899999999999999999999765 456789999999
Q ss_pred CCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccC
Q 003278 593 ATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRN 672 (834)
Q Consensus 593 ~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~ 672 (834)
++++|.+++..... ..++|..++.++.|++.||+|||+ .+|+||||||+||++++++.+|++|||++......
T Consensus 83 ~~~~L~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 155 (256)
T cd05082 83 AKGSLVDYLRSRGR----SVLGGDCLLKFSLDVCEAMEYLEA---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 155 (256)
T ss_pred CCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCEeccccchheEEEcCCCcEEecCCccceecccc
Confidence 99999999865432 247899999999999999999996 68999999999999999999999999998753221
Q ss_pred CCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcCcccc
Q 003278 673 DHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRPLAE 751 (834)
Q Consensus 673 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (834)
.....++..|||||++.+..++.++|||||||++|||+| |+.|+....... ....+ ..... ..
T Consensus 156 ----------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~-~~~~~---~~~~~--~~ 219 (256)
T cd05082 156 ----------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-VVPRV---EKGYK--MD 219 (256)
T ss_pred ----------CCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHH---hcCCC--CC
Confidence 112345678999999998899999999999999999998 888875332211 11111 11100 01
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHcc
Q 003278 752 LVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDG 796 (834)
Q Consensus 752 ~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~ 796 (834)
.. ...+. .+..++.+||..+|++|||+.++++.|+.
T Consensus 220 -----~~-~~~~~---~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 220 -----AP-DGCPP---VVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred -----CC-CCCCH---HHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 11 11122 34556679999999999999999999875
No 418
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=2.8e-36 Score=319.14 Aligned_cols=254 Identities=31% Similarity=0.472 Sum_probs=198.1
Q ss_pred CCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhH--HHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEcc
Q 003278 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFE--KTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYM 190 (834)
Q Consensus 113 f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~--~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 190 (834)
|+..+.||+|+||.||++....++..||+|++........ ....+|+.++.+++||||+++++++...+..++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 3456799999999999999999999999999876543322 23456999999999999999999999999999999999
Q ss_pred CCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhh
Q 003278 191 PNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEH 270 (834)
Q Consensus 191 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~ 270 (834)
++++|.+++.. ...+++..+..++.|+++||.|||+. +|+||||||+|||+++++.++|+|||++.....
T Consensus 81 ~~~~L~~~l~~-------~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~ 150 (260)
T PF00069_consen 81 PGGSLQDYLQK-------NKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLSE 150 (260)
T ss_dssp TTEBHHHHHHH-------HSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEESTS
T ss_pred ccccccccccc-------cccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccc
Confidence 99999999972 24679999999999999999999996 999999999999999999999999999864310
Q ss_pred hhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHH
Q 003278 271 ELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWI 350 (834)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~ 350 (834)
. ........||..|+|||.+..+...+.++||||+|+++++|++|+.|+......+.... .
T Consensus 151 ~----------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~---~ 211 (260)
T PF00069_consen 151 N----------------NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEI---I 211 (260)
T ss_dssp T----------------TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHH---H
T ss_pred c----------------ccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhh---h
Confidence 0 01134456899999999987455789999999999999999999999875411111111 1
Q ss_pred HHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHH
Q 003278 351 RRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIE 403 (834)
Q Consensus 351 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~ 403 (834)
..... ..... ... ........+.++...||+.||++||++.++++
T Consensus 212 ~~~~~-~~~~~---~~~----~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 212 EKILK-RPLPS---SSQ----QSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HHHHH-THHHH---HTT----SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred hhccc-ccccc---ccc----ccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11110 00000 000 00001257899999999999999999999986
No 419
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1e-35 Score=323.30 Aligned_cols=257 Identities=26% Similarity=0.412 Sum_probs=197.7
Q ss_pred cCCCCCCCeeeccCCeEEEEEEECCCCe----EEEEEEecccC-hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEE
Q 003278 110 SNGFDEDEVLGSGGFGKVYRAVLPSDGT----VVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLL 184 (834)
Q Consensus 110 t~~f~~~~~LG~G~fG~Vy~~~~~~~g~----~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~ 184 (834)
.++|+..+.||+|+||.||+|.+..+|. .||+|.+.... ......+.+|+.+++.++||||++++|+|... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~ 84 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ 84 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence 3567888999999999999999876765 57889876542 23345788999999999999999999999764 467
Q ss_pred EEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccc
Q 003278 185 LVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGL 264 (834)
Q Consensus 185 lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 264 (834)
+|+||+++|+|.+++.... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 85 ~v~e~~~~g~l~~~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~ 155 (303)
T cd05110 85 LVTQLMPHGCLLDYVHEHK------DNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGL 155 (303)
T ss_pred eeehhcCCCCHHHHHHhcc------cCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEccccc
Confidence 9999999999999986532 3578999999999999999999985 999999999999999999999999999
Q ss_pred hhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCcc
Q 003278 265 ARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQ 343 (834)
Q Consensus 265 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~ 343 (834)
++.+...... .......++..|+|||++... .++.++|||||||++|||+| |+.|+.... .
T Consensus 156 ~~~~~~~~~~--------------~~~~~~~~~~~y~~PE~~~~~-~~~~~~DiwslG~~l~el~t~g~~p~~~~~---~ 217 (303)
T cd05110 156 ARLLEGDEKE--------------YNADGGKMPIKWMALECIHYR-KFTHQSDVWSYGVTIWELMTFGGKPYDGIP---T 217 (303)
T ss_pred cccccCcccc--------------cccCCCccccccCCHHHhccC-CCChHHHHHHHHHHHHHHHhCCCCCCCCCC---H
Confidence 9865321100 001223467889999988644 67899999999999999998 888875421 1
Q ss_pred chHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcC
Q 003278 344 IILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGS 408 (834)
Q Consensus 344 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~ 408 (834)
..+..++ ..+.... .+ ... ...+..++..||..+|+.||+|.++++.|...
T Consensus 218 ~~~~~~~----~~~~~~~--~~----~~~----~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~ 268 (303)
T cd05110 218 REIPDLL----EKGERLP--QP----PIC----TIDVYMVMVKCWMIDADSRPKFKELAAEFSRM 268 (303)
T ss_pred HHHHHHH----HCCCCCC--CC----CCC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 1122221 1111110 00 111 23578899999999999999999999988764
No 420
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.8e-35 Score=318.55 Aligned_cols=251 Identities=17% Similarity=0.245 Sum_probs=192.1
Q ss_pred cCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCCC--hhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEec
Q 003278 515 FSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKC--PALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY 591 (834)
Q Consensus 515 f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~--~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey 591 (834)
|...+.||+|+||.||++.. .+++.||||.+..... ......+.+|+.++++++|+||+++++.+.+.+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 55667899999999999986 4578999998864322 22235678899999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccccc
Q 003278 592 SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTR 671 (834)
Q Consensus 592 ~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~ 671 (834)
+++++|..++..... ..+++..+..++.|++.||.|||+ .+|+||||||+||++++++.++|+|||++.....
T Consensus 82 ~~g~~L~~~l~~~~~----~~l~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 154 (285)
T cd05630 82 MNGGDLKFHIYHMGE----AGFEEGRAVFYAAEICCGLEDLHQ---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 154 (285)
T ss_pred cCCCcHHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeccceeecCC
Confidence 999999988864321 247888899999999999999996 6999999999999999999999999999875432
Q ss_pred CCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCcccc
Q 003278 672 NDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAE 751 (834)
Q Consensus 672 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (834)
.. ......||..|||||++.+..++.++|||||||++|||++|+.||........ .......... ...
T Consensus 155 ~~--------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~-~~~~~~~~~~---~~~ 222 (285)
T cd05630 155 GQ--------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-REEVERLVKE---VQE 222 (285)
T ss_pred Cc--------cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch-HHHHHhhhhh---hhh
Confidence 21 11234689999999999999999999999999999999999999864322110 0111111000 000
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCC-----hhHHHH
Q 003278 752 LVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPS-----MRQILS 792 (834)
Q Consensus 752 ~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPt-----m~~v~~ 792 (834)
.....+. .+ +..++.+||+.||++||| +.++++
T Consensus 223 ----~~~~~~~-~~---~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 223 ----EYSEKFS-PD---ARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred ----hcCccCC-HH---HHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 0111122 23 345556899999999999 667764
No 421
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=2.6e-35 Score=311.48 Aligned_cols=254 Identities=24% Similarity=0.367 Sum_probs=199.0
Q ss_pred CcccccCCcEEEEEEECC----CcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEeccCC
Q 003278 519 QRVAEMDFGTAYQGFLDN----HQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSAT 594 (834)
Q Consensus 519 ~~ig~g~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~~ 594 (834)
+.||+|+||.||+|.... +..|++|.+.........+.+.+|+.++.+++||||+++++++.+....++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 368999999999999754 7789999987665544567899999999999999999999999999999999999999
Q ss_pred CchhhhhhcCCCC---CCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccccc
Q 003278 595 RILSHLLFHNNHR---IGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTR 671 (834)
Q Consensus 595 g~L~~~l~~~~~~---~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~ 671 (834)
++|.+++...... .....+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+|++|||++.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS---KKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHc---CCcccCccCcceEEECCCCcEEEccccccccccc
Confidence 9999998764211 001358999999999999999999996 7999999999999999999999999999987543
Q ss_pred CCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcCccc
Q 003278 672 NDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRPLA 750 (834)
Q Consensus 672 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (834)
... ........++..|+|||.+....++.++|||||||++|||++ |..|+....+ ..+...... ...
T Consensus 158 ~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-~~~~~~~~~---~~~--- 225 (262)
T cd00192 158 DDY-----YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN-EEVLEYLRK---GYR--- 225 (262)
T ss_pred ccc-----cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH-HHHHHHHHc---CCC---
Confidence 321 011223567889999999998899999999999999999999 5888865422 222221111 000
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHc
Q 003278 751 ELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795 (834)
Q Consensus 751 ~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~ 795 (834)
....... + .++..++.+||..+|++|||+.++++.|+
T Consensus 226 ----~~~~~~~-~---~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 226 ----LPKPEYC-P---DELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred ----CCCCccC-C---hHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 0011111 2 24556666899999999999999999874
No 422
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.4e-35 Score=312.46 Aligned_cols=250 Identities=20% Similarity=0.335 Sum_probs=195.1
Q ss_pred CcccccCCcEEEEEEECCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEeccCCCchh
Q 003278 519 QRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILS 598 (834)
Q Consensus 519 ~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~~g~L~ 598 (834)
++||+|+||.||++...++..|++|.+...........|.+|++++++++||||+++++++.+....++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 36899999999999987789999999876555545678999999999999999999999999999999999999999999
Q ss_pred hhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCCCCcc
Q 003278 599 HLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHGHRK 678 (834)
Q Consensus 599 ~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~~~~~ 678 (834)
+++..... .+++...+.++.+++.||+|||+ .+++||||||+|||++.++.+||+|||++........
T Consensus 81 ~~l~~~~~-----~~~~~~~~~~~~~~~~~l~~lH~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~---- 148 (251)
T cd05041 81 TFLRKKKN-----RLTVKKLLQMSLDAAAGMEYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIY---- 148 (251)
T ss_pred HHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHh---CCEehhhcCcceEEEcCCCcEEEeeccccccccCCcc----
Confidence 99865322 37788889999999999999996 6899999999999999999999999999975432111
Q ss_pred cccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcCcccccccccc
Q 003278 679 ATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDLSL 757 (834)
Q Consensus 679 ~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 757 (834)
........++..|+|||++.++.++.++|||||||++|||+| |..|+....+. ....... ... ... .
T Consensus 149 -~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~-~~~~~~~---~~~----~~~---~ 216 (251)
T cd05041 149 -TVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ-QTRERIE---SGY----RMP---A 216 (251)
T ss_pred -eeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH-HHHHHHh---cCC----CCC---C
Confidence 001112234667999999998899999999999999999999 77776543221 1111110 000 000 0
Q ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHcc
Q 003278 758 NGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDG 796 (834)
Q Consensus 758 ~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~ 796 (834)
....+ ..+.+++.+||..+|++|||+.+|++.|++
T Consensus 217 -~~~~~---~~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 217 -PQLCP---EEIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred -CccCC---HHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 01111 245667779999999999999999999863
No 423
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.6e-35 Score=317.30 Aligned_cols=248 Identities=23% Similarity=0.379 Sum_probs=198.9
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC-hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEcc
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYM 190 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 190 (834)
.|+..+.||+|+||.||+|.+..++..||||.+.... ....+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 3667789999999999999998889999999986432 345577899999999999999999999999999999999999
Q ss_pred CCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhh
Q 003278 191 PNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEH 270 (834)
Q Consensus 191 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~ 270 (834)
++|+|.+++.. .++++.+...++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++..+..
T Consensus 85 ~~~~L~~~i~~--------~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06640 85 GGGSALDLLRA--------GPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD 153 (277)
T ss_pred CCCcHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccC
Confidence 99999998853 3578889999999999999999985 999999999999999999999999999975432
Q ss_pred hhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHH
Q 003278 271 ELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWI 350 (834)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~ 350 (834)
.. .......||..|+|||++... ..+.++|||||||++|||+||+.|+....+... .
T Consensus 154 ~~----------------~~~~~~~~~~~y~apE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~------~ 210 (277)
T cd06640 154 TQ----------------IKRNTFVGTPFWMAPEVIQQS-AYDSKADIWSLGITAIELAKGEPPNSDMHPMRV------L 210 (277)
T ss_pred Cc----------------cccccccCcccccCHhHhccC-CCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH------h
Confidence 11 012234588999999988654 578999999999999999999999864322110 0
Q ss_pred HHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 351 RRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 351 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
... ..+. .+ .........+.+++..||+.+|++||++.+++..
T Consensus 211 ~~~-~~~~-----~~-----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 211 FLI-PKNN-----PP-----TLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred hhh-hcCC-----CC-----CCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 000 0000 01 1112233567899999999999999999999864
No 424
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.9e-35 Score=313.69 Aligned_cols=254 Identities=22% Similarity=0.297 Sum_probs=196.4
Q ss_pred hCcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCCCh----hHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCP----ALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLV 587 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~----~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~l 587 (834)
++|...+.||+|+||.||+|.. .++..||+|.+...... ...+.+.+|++++++++||||+++++++.+.+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 5788889999999999999985 46889999987643221 123578899999999999999999999999999999
Q ss_pred EEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecc
Q 003278 588 IYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAE 667 (834)
Q Consensus 588 v~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~ 667 (834)
|+||+++++|.+++.... .+++.....++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++
T Consensus 82 v~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nilv~~~~~~~l~dfg~~~ 152 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG------ALTETVTRKYTRQILEGVEYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASK 152 (263)
T ss_pred EEEECCCCcHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccce
Confidence 999999999999886432 37788888999999999999996 699999999999999999999999999987
Q ss_pred ccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcC
Q 003278 668 FLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKR 747 (834)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~ 747 (834)
....... .........|+..|+|||++.+..++.++|||||||++|||+||+.|+......... ..... .
T Consensus 153 ~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~----~~~~~--~ 222 (263)
T cd06625 153 RLQTICS----SGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAI----FKIAT--Q 222 (263)
T ss_pred ecccccc----ccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHH----HHHhc--c
Confidence 5432111 011112356888999999999988999999999999999999999998643221111 11100 0
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 003278 748 PLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSI 793 (834)
Q Consensus 748 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~ 793 (834)
.. .+.+....+ . .+..++.+||..+|.+|||+.++++.
T Consensus 223 ~~----~~~~~~~~~-~---~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 223 PT----NPQLPSHVS-P---DARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred CC----CCCCCccCC-H---HHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 00 011111122 2 34455568999999999999999863
No 425
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-36 Score=326.08 Aligned_cols=251 Identities=23% Similarity=0.341 Sum_probs=199.3
Q ss_pred cCCcccccCCcEEEEEEECCC-----cEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEec
Q 003278 517 ESQRVAEMDFGTAYQGFLDNH-----QYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY 591 (834)
Q Consensus 517 ~~~~ig~g~~g~vy~~~~~~~-----~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey 591 (834)
..+.||+|-||.||+|.+.+. ..||||..+.+..++.++.|..|+-+|++++|||||+|+|.|.+. ..+||||.
T Consensus 393 l~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~WivmEL 471 (974)
T KOG4257|consen 393 LKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWIVMEL 471 (974)
T ss_pred HHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ceeEEEec
Confidence 356799999999999997442 358999998888888889999999999999999999999999874 68999999
Q ss_pred cCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccccc
Q 003278 592 SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTR 671 (834)
Q Consensus 592 ~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~ 671 (834)
++-|-|..||..+.. .|+....+.++.||+.||+|||+ ...|||||..+|||+...--+|++||||++.+..
T Consensus 472 ~~~GELr~yLq~nk~-----sL~l~tL~ly~~Qi~talaYLeS---krfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed 543 (974)
T KOG4257|consen 472 APLGELREYLQQNKD-----SLPLRTLTLYCYQICTALAYLES---KRFVHRDIAARNILVSSPQCVKLADFGLSRYLED 543 (974)
T ss_pred ccchhHHHHHHhccc-----cchHHHHHHHHHHHHHHHHHHHh---hchhhhhhhhhheeecCcceeeecccchhhhccc
Confidence 999999999987643 37777778899999999999996 7899999999999999999999999999999876
Q ss_pred CCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcCccc
Q 003278 672 NDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRPLA 750 (834)
Q Consensus 672 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (834)
..... ++ ...=...|||||.+.-..+|.+||||-|||++||+++ |..||..-...+ ++-.+ +.+++.
T Consensus 544 ~~yYk--aS----~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD-VI~~i---EnGeRl-- 611 (974)
T KOG4257|consen 544 DAYYK--AS----RGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD-VIGHI---ENGERL-- 611 (974)
T ss_pred cchhh--cc----ccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccc-eEEEe---cCCCCC--
Confidence 54322 11 1122356999999999999999999999999999886 888885322211 11111 111111
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccC
Q 003278 751 ELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGN 797 (834)
Q Consensus 751 ~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~ 797 (834)
...+.++ ..+..||.+||+.+|.+||+|.+|...|+.+
T Consensus 612 ------P~P~nCP---p~LYslmskcWayeP~kRPrftei~~~lsdv 649 (974)
T KOG4257|consen 612 ------PCPPNCP---PALYSLMSKCWAYEPSKRPRFTEIKAILSDV 649 (974)
T ss_pred ------CCCCCCC---hHHHHHHHHHhccCcccCCcHHHHHHHHHHH
Confidence 0112223 3455777899999999999999999888654
No 426
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=8.6e-36 Score=328.53 Aligned_cols=262 Identities=22% Similarity=0.294 Sum_probs=199.6
Q ss_pred CcCcCCcccccCCcEEEEEEEC--------CCcEEEEEEecCCCChhHHHHHHHHHHHHHhc-cCCCceeEEEEEeeCCe
Q 003278 514 NFSESQRVAEMDFGTAYQGFLD--------NHQYVLVKRLGMSKCPALRTRFSNELQNLARL-RHRNLVQLCGWCTEQGE 584 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~~--------~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l-~HpNiv~l~g~~~~~~~ 584 (834)
.|...+.||+|+||.||++... ....||+|.+.........+.|.+|++++.++ +||||++++++|.+.+.
T Consensus 13 ~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 92 (334)
T cd05100 13 RLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 92 (334)
T ss_pred HeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCc
Confidence 4566788999999999999742 12368999887554444567899999999999 89999999999999999
Q ss_pred EEEEEeccCCCchhhhhhcCCC----------CCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecC
Q 003278 585 MLVIYDYSATRILSHLLFHNNH----------RIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDP 654 (834)
Q Consensus 585 ~~lv~Ey~~~g~L~~~l~~~~~----------~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~ 654 (834)
.+++|||+++|+|.+++..... ......++|..++.++.|++.||+|||+ .+|+||||||+|||+++
T Consensus 93 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~Nill~~ 169 (334)
T cd05100 93 LYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS---QKCIHRDLAARNVLVTE 169 (334)
T ss_pred eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEcC
Confidence 9999999999999999875321 0122358899999999999999999996 69999999999999999
Q ss_pred CCCceEeeeeeccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCch
Q 003278 655 DMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEG 733 (834)
Q Consensus 655 ~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~ 733 (834)
++.+||+|||+++....... ........++..|||||++.+..++.++|||||||++|||++ |..|+......
T Consensus 170 ~~~~kL~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~- 243 (334)
T cd05100 170 DNVMKIADFGLARDVHNIDY-----YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE- 243 (334)
T ss_pred CCcEEECCcccceecccccc-----cccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHH-
Confidence 99999999999976532211 011112345678999999999999999999999999999999 77777533221
Q ss_pred hHHHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccCC
Q 003278 734 LLVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGND 798 (834)
Q Consensus 734 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~~ 798 (834)
.....+. ..... . ..... ...+.+++.+||+.+|++||||.+|++.|+.+.
T Consensus 244 ~~~~~~~---~~~~~--~-----~~~~~----~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~ 294 (334)
T cd05100 244 ELFKLLK---EGHRM--D-----KPANC----THELYMIMRECWHAVPSQRPTFKQLVEDLDRVL 294 (334)
T ss_pred HHHHHHH---cCCCC--C-----CCCCC----CHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence 1111111 10000 0 11111 124556777999999999999999999997665
No 427
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=6.2e-36 Score=334.05 Aligned_cols=210 Identities=16% Similarity=0.170 Sum_probs=174.1
Q ss_pred HHHHHHHhhCcCcCCcccccCCcEEEEEEEC-CCcEEEEEEecCCC--ChhHHHHHHHHHHHHHhccCCCceeEEEEEee
Q 003278 505 FKEIISATNNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSK--CPALRTRFSNELQNLARLRHRNLVQLCGWCTE 581 (834)
Q Consensus 505 ~~el~~at~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~ 581 (834)
+.++....++|...+.||+|+||.||++... ++..+|+|.+.... .......+.+|+.+++.++||||+++++++.+
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 4445555688999999999999999999965 57889999885321 12233567899999999999999999999999
Q ss_pred CCeEEEEEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEe
Q 003278 582 QGEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLG 661 (834)
Q Consensus 582 ~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~ 661 (834)
.+..++||||+++|+|.+++... .++...+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~~-------~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NIll~~~~~ikL~ 184 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSNY-------DVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLA 184 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHEEECCCCCEEEE
Confidence 99999999999999999988542 25667777899999999999996 699999999999999999999999
Q ss_pred eeeeccccccCCCCCcccccCccccccccCccchhccccC----CCCccCcchhhHHHHHHHHhCCCccCCCC
Q 003278 662 SFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESG----EATSMADVYSFGVVVLEVVTGQMAVDFRL 730 (834)
Q Consensus 662 DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~----~~~~k~DV~SfGvvl~E~~tG~~p~~~~~ 730 (834)
|||+++.+..... .......||+.|||||++... .++.++|||||||++|||+||+.||....
T Consensus 185 DfG~a~~~~~~~~------~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~ 251 (371)
T cd05622 185 DFGTCMKMNKEGM------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 251 (371)
T ss_pred eCCceeEcCcCCc------ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCC
Confidence 9999976532211 112346799999999998653 37899999999999999999999997543
No 428
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.1e-36 Score=313.82 Aligned_cols=265 Identities=22% Similarity=0.237 Sum_probs=203.5
Q ss_pred hcCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccCh---hhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEE
Q 003278 109 GSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGE---RFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLL 185 (834)
Q Consensus 109 ~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 185 (834)
.-+.|+..+.||.|.-|+||++.+..++..+|+|++.+..- ....+.+.|-+||+.++||.+++||+.+..++..||
T Consensus 75 ~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl 154 (459)
T KOG0610|consen 75 GLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCL 154 (459)
T ss_pred CHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEE
Confidence 34568888999999999999999998899999999976532 233456779999999999999999999999999999
Q ss_pred EEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccch
Q 003278 186 VYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLA 265 (834)
Q Consensus 186 V~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 265 (834)
|||||+||+|..++++++. ..++...+..++.+|+-||+|||-. |||.|||||+||||-++|++.|+||-|+
T Consensus 155 ~meyCpGGdL~~LrqkQp~-----~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS 226 (459)
T KOG0610|consen 155 VMEYCPGGDLHSLRQKQPG-----KRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLS 226 (459)
T ss_pred EEecCCCccHHHHHhhCCC-----CccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeecccc
Confidence 9999999999999887653 5789999999999999999999986 9999999999999999999999999998
Q ss_pred hhhhhhhhhhh-----------------------h-cccccc----------------cccccccceeeeccccCCCccc
Q 003278 266 RWLEHELQYQM-----------------------R-TSSARN----------------HQFHLAETTRIGGTIGYLPPES 305 (834)
Q Consensus 266 ~~~~~~~~~~~-----------------------~-~~~~~~----------------~~~~~~~~~~~~Gt~~Y~aPE~ 305 (834)
.......+... + ...... .......+..++||-.|+|||+
T Consensus 227 ~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEv 306 (459)
T KOG0610|consen 227 LRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEV 306 (459)
T ss_pred ccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCcccccccccccccccee
Confidence 76422111100 0 000000 0111133457889999999999
Q ss_pred cccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHH
Q 003278 306 FQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLAL 385 (834)
Q Consensus 306 ~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~ 385 (834)
+... -.+..+|+|+|||+||||+.|+.||...... ..+.+. +-..+.-.... .....+.+|+.
T Consensus 307 I~G~-GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~--~Tl~NI-------------v~~~l~Fp~~~-~vs~~akDLIr 369 (459)
T KOG0610|consen 307 IRGE-GHGSAVDWWTFGIFLYEMLYGTTPFKGSNNK--ETLRNI-------------VGQPLKFPEEP-EVSSAAKDLIR 369 (459)
T ss_pred eecC-CCCchhhHHHHHHHHHHHHhCCCCcCCCCch--hhHHHH-------------hcCCCcCCCCC-cchhHHHHHHH
Confidence 9754 5788999999999999999999999764332 222221 11111111111 22345778888
Q ss_pred HhcccCCCCCCch
Q 003278 386 LCTLHNPHLRPSM 398 (834)
Q Consensus 386 ~Cl~~~p~~RPsm 398 (834)
.-|..||.+|-..
T Consensus 370 ~LLvKdP~kRlg~ 382 (459)
T KOG0610|consen 370 KLLVKDPSKRLGS 382 (459)
T ss_pred HHhccChhhhhcc
Confidence 9999999999873
No 429
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.5e-35 Score=331.64 Aligned_cols=258 Identities=17% Similarity=0.233 Sum_probs=191.1
Q ss_pred CcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCC-ChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCC-----eEE
Q 003278 514 NFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSK-CPALRTRFSNELQNLARLRHRNLVQLCGWCTEQG-----EML 586 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~-----~~~ 586 (834)
+|+..+.||+|+||.||++.. .++..||||.+.... .....+++.+|+.+|+.++||||+++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 477788999999999999985 568899999886432 2233467889999999999999999999998766 789
Q ss_pred EEEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeec
Q 003278 587 VIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALA 666 (834)
Q Consensus 587 lv~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla 666 (834)
+||||+. ++|..++... ..+++.....++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 81 lv~e~~~-~~l~~~~~~~------~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~a 150 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSP------QPLSSDHVKVFLYQILRGLKYLHS---AGILHRDIKPGNLLVNSNCVLKICDFGLA 150 (372)
T ss_pred EEeeccc-cCHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHHEEECCCCCEEeccccce
Confidence 9999997 4676666432 247888899999999999999996 68999999999999999999999999999
Q ss_pred cccccCCCCCcccccCccccccccCccchhccccC-CCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHh-
Q 003278 667 EFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESG-EATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEA- 744 (834)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~-~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~- 744 (834)
+....... .......||+.|+|||++.+. .++.++|||||||++|||+||+.||....+...+ ..+.....
T Consensus 151 ~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~-~~i~~~~g~ 223 (372)
T cd07853 151 RVEEPDES------KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQL-DLITDLLGT 223 (372)
T ss_pred eecccCcc------ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHH-HHHHHHcCC
Confidence 76432211 112234688999999998764 4789999999999999999999998754432211 11111000
Q ss_pred -----------------hcCcc--cccccc-ccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 745 -----------------RKRPL--AELVDL-SLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 745 -----------------~~~~~--~~~~d~-~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
...+. ...... .+.... ...+.+++.+|++.||++|||+.++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~li~~mL~~dP~~R~t~~e~l~ 287 (372)
T cd07853 224 PSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQA----THEAVHLLCRMLVFDPDKRISAADALA 287 (372)
T ss_pred CCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCC----CHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence 00000 000000 000111 124556777999999999999999986
No 430
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=8.7e-36 Score=321.69 Aligned_cols=269 Identities=22% Similarity=0.283 Sum_probs=196.5
Q ss_pred hcCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC-hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEE
Q 003278 109 GSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVY 187 (834)
Q Consensus 109 ~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 187 (834)
++++|...+.||+|+||.||+|....+|..||+|++.... ......+.+|+.+++.++|+||+++++++..++..++||
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 4678999999999999999999998889999999986432 223346788999999999999999999999999999999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhh
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARW 267 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 267 (834)
||++ ++|...+... ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 83 e~~~-~~l~~~~~~~------~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~ 152 (291)
T cd07870 83 EYMH-TDLAQYMIQH------PGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARA 152 (291)
T ss_pred eccc-CCHHHHHHhC------CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccc
Confidence 9996 6776666432 13477888999999999999999985 999999999999999999999999999874
Q ss_pred hhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHH
Q 003278 268 LEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347 (834)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~ 347 (834)
..... .......+++.|+|||.+.....++.++|||||||++|||+||+.||+......+....
T Consensus 153 ~~~~~----------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~ 216 (291)
T cd07870 153 KSIPS----------------QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEK 216 (291)
T ss_pred cCCCC----------------CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHH
Confidence 32110 00122347899999998865445688999999999999999999998743321111111
Q ss_pred HHHH----------HHhhcCccccccccccCCCCC-----CHHHHHHHHHHHHHhcccCCCCCCchhhHHH
Q 003278 348 DWIR----------RLSDEGKVLQAGDNRLSDGSY-----KLCDMEHLTHLALLCTLHNPHLRPSMKWVIE 403 (834)
Q Consensus 348 ~~~~----------~~~~~~~~~~~~d~~l~~~~~-----~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~ 403 (834)
.|.. .+...........+....... .......+.+++..|++.||.+|||+.+++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 217 IWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred HHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 1100 000000000000000000000 0011245678999999999999999999875
No 431
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=2.4e-35 Score=313.36 Aligned_cols=262 Identities=23% Similarity=0.348 Sum_probs=204.2
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC-hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEc
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDY 189 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 189 (834)
++|+..+.||.|+||+||+|....++..+|+|++.... ....+.+.+|+.+++.++|+||+++++.+...+..++||||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 46888999999999999999998889999999986432 23557789999999999999999999999999999999999
Q ss_pred cCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhh
Q 003278 190 MPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLE 269 (834)
Q Consensus 190 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~ 269 (834)
+++++|.+++..... ...+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|||++..+.
T Consensus 81 ~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~ 153 (267)
T cd06610 81 LSGGSLLDIMKSSYP----RGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLA 153 (267)
T ss_pred cCCCcHHHHHHHhcc----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhc
Confidence 999999999865321 24589999999999999999999985 99999999999999999999999999997653
Q ss_pred hhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHH
Q 003278 270 HELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDW 349 (834)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~ 349 (834)
..... .........|+..|+|||++......+.++|||||||+++||+||+.|+...... ..+...
T Consensus 154 ~~~~~------------~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~--~~~~~~ 219 (267)
T cd06610 154 DGGDR------------TRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM--KVLMLT 219 (267)
T ss_pred cCccc------------cccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh--hhHHHH
Confidence 32110 0001234568999999999876656799999999999999999999998643221 111111
Q ss_pred HHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHH
Q 003278 350 IRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIE 403 (834)
Q Consensus 350 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~ 403 (834)
.. . ..+.+........-...+.+++..||+.||++||++.++++
T Consensus 220 ~~----~------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 220 LQ----N------DPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred hc----C------CCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 11 0 11111100000011245788999999999999999999986
No 432
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=6.9e-36 Score=328.01 Aligned_cols=241 Identities=18% Similarity=0.195 Sum_probs=181.9
Q ss_pred cccccCCcEEEEEEEC-CCcEEEEEEecCCCC--hhHHHHHHHHH-HHHHhccCCCceeEEEEEeeCCeEEEEEeccCCC
Q 003278 520 RVAEMDFGTAYQGFLD-NHQYVLVKRLGMSKC--PALRTRFSNEL-QNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATR 595 (834)
Q Consensus 520 ~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~--~~~~~~f~~E~-~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~~g 595 (834)
.||+|+||.||+|... ++..||+|.+..... ......+..|. .+++.++||||+++++++.+.+..++||||+++|
T Consensus 2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05602 2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGG 81 (325)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCC
Confidence 5899999999999864 567899999864321 11123344444 4578899999999999999999999999999999
Q ss_pred chhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCCC
Q 003278 596 ILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDHG 675 (834)
Q Consensus 596 ~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~~ 675 (834)
+|..++.... .+.......++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~L~~~~~~~~------~~~~~~~~~~~~qi~~~L~~lH~---~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~-- 150 (325)
T cd05602 82 ELFYHLQRER------CFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN-- 150 (325)
T ss_pred cHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEEccCCCCcccccCC--
Confidence 9999886532 25566677799999999999996 699999999999999999999999999997532211
Q ss_pred CcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCcccccccc
Q 003278 676 HRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDL 755 (834)
Q Consensus 676 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 755 (834)
.......||+.|||||++.+..++.++|||||||++|||++|+.||....... ...... . .+.
T Consensus 151 -----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~---~--~~~------ 213 (325)
T cd05602 151 -----GTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE-MYDNIL---N--KPL------ 213 (325)
T ss_pred -----CCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH-HHHHHH---h--CCc------
Confidence 11234679999999999999999999999999999999999999986433221 111111 1 111
Q ss_pred ccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 756 SLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 756 ~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
.+.... ...+. .+..+|++.||.+||++.+.+.
T Consensus 214 ~~~~~~-~~~~~---~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 214 QLKPNI-TNSAR---HLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred CCCCCC-CHHHH---HHHHHHcccCHHHCCCCCCCHH
Confidence 011111 23334 4445899999999999876543
No 433
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2e-35 Score=317.94 Aligned_cols=253 Identities=18% Similarity=0.272 Sum_probs=195.5
Q ss_pred CcCcCCcccccCCcEEEEEEEC-CCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEecc
Q 003278 514 NFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYS 592 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~ 592 (834)
+|...+.||+|+||.||++... ++..||+|.+.....+.....|.+|+.++.+++||||+++++++...+..++||||+
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence 4555678999999999999975 688999998876544444578999999999999999999999999999999999999
Q ss_pred CCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccC
Q 003278 593 ATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRN 672 (834)
Q Consensus 593 ~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~ 672 (834)
++++|..++..... ...+++..+..++.|++.||.|||+. .+|+||||||+||+++.++.+||+|||++..+...
T Consensus 82 ~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 156 (286)
T cd06622 82 DAGSLDKLYAGGVA---TEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS 156 (286)
T ss_pred CCCCHHHHHHhccc---cCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC
Confidence 99999988865321 22488999999999999999999963 58999999999999999999999999998754321
Q ss_pred CCCCcccccCccccccccCccchhccccCC------CCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhc
Q 003278 673 DHGHRKATSGNRSVRGIFGYMSPEYIESGE------ATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARK 746 (834)
Q Consensus 673 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~------~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~ 746 (834)
......|+.+|+|||++.+.. ++.++|||||||++|||+||+.||........ ..........
T Consensus 157 ---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~- 225 (286)
T cd06622 157 ---------LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANI-FAQLSAIVDG- 225 (286)
T ss_pred ---------ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhH-HHHHHHHhhc-
Confidence 122346888999999986543 47899999999999999999999864332221 1111111111
Q ss_pred CccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 747 RPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 747 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
.. +.+...++ ..+..++.+||+.+|++||++.+++.
T Consensus 226 -~~-----~~~~~~~~----~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 226 -DP-----PTLPSGYS----DDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred -CC-----CCCCcccC----HHHHHHHHHHcccCcccCCCHHHHhc
Confidence 00 11111111 23445666999999999999999986
No 434
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.5e-35 Score=318.07 Aligned_cols=255 Identities=25% Similarity=0.368 Sum_probs=194.4
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC-hhhHHHHHHHHHH-HHhCCCCceeeEeeeEEeCCEEEEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG-ERFEKTFAAELVA-VAHLRHRNLVRLRGWCVHEDQLLLVYD 188 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~-~~~~~~~~~E~~~-l~~l~H~nIv~l~g~~~~~~~~~lV~E 188 (834)
++|+..+.||+|+||.||+|+...+|+.||+|++.... ......+..|+.. ++.++||||+++++++...+..++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 46888899999999999999998899999999986542 2234456666664 667899999999999999999999999
Q ss_pred ccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhh
Q 003278 189 YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWL 268 (834)
Q Consensus 189 y~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 268 (834)
|++ |+|.+++..... ....+++..+..++.|++.||+|||+. .+++||||||+|||++.++.+||+|||+++.+
T Consensus 81 ~~~-~~l~~~l~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~--~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~ 154 (283)
T cd06617 81 VMD-TSLDKFYKKVYD---KGLTIPEDILGKIAVSIVKALEYLHSK--LSVIHRDVKPSNVLINRNGQVKLCDFGISGYL 154 (283)
T ss_pred hhc-ccHHHHHHHhcc---CCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeeccccccc
Confidence 996 788888764321 235689999999999999999999974 38999999999999999999999999998754
Q ss_pred hhhhhhhhhcccccccccccccceeeeccccCCCccccccC---CCCCcccceeehhhHHHHHHhCCccCCCCCCCccch
Q 003278 269 EHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKG---SVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII 345 (834)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~---~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~ 345 (834)
.... ..+...||..|+|||.+... ..++.++|||||||++|||++|+.|+...... ...
T Consensus 155 ~~~~-----------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~ 216 (283)
T cd06617 155 VDSV-----------------AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP-FQQ 216 (283)
T ss_pred cccc-----------------ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC-HHH
Confidence 2210 01234588999999987532 34578999999999999999999998532111 011
Q ss_pred HHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHH
Q 003278 346 LLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIE 403 (834)
Q Consensus 346 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~ 403 (834)
+ ..... ...+.+....+ ...+.+++..||..+|++||++.+|++
T Consensus 217 ~----~~~~~------~~~~~~~~~~~----~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 217 L----KQVVE------EPSPQLPAEKF----SPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred H----HHHHh------cCCCCCCcccc----CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1 11111 11111111111 135788999999999999999999986
No 435
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1e-35 Score=322.32 Aligned_cols=248 Identities=22% Similarity=0.358 Sum_probs=196.4
Q ss_pred CCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEccCCC
Q 003278 114 DEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNR 193 (834)
Q Consensus 114 ~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 193 (834)
+....||+|+||.||+|....+++.||||.+........+.+.+|+.++..++||||+++++++..++..++||||++++
T Consensus 24 ~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~ 103 (297)
T cd06659 24 ENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGG 103 (297)
T ss_pred HhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCC
Confidence 33457999999999999998889999999987654455677889999999999999999999999999999999999999
Q ss_pred CHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhhh
Q 003278 194 SLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQ 273 (834)
Q Consensus 194 sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~ 273 (834)
+|..++.. ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++..+....
T Consensus 104 ~L~~~~~~--------~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~- 171 (297)
T cd06659 104 ALTDIVSQ--------TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV- 171 (297)
T ss_pred CHHHHHhh--------cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhccccc-
Confidence 99987743 3478999999999999999999985 99999999999999999999999999987543211
Q ss_pred hhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHHHHH
Q 003278 274 YQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIRRL 353 (834)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~~~~ 353 (834)
.......|++.|+|||++... .++.++|||||||++|||++|+.|+...... .....+.
T Consensus 172 ---------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~---~~~~~~~-- 230 (297)
T cd06659 172 ---------------PKRKSLVGTPYWMAPEVISRT-PYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV---QAMKRLR-- 230 (297)
T ss_pred ---------------ccccceecCccccCHHHHccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHh--
Confidence 012335689999999998654 5789999999999999999999998643211 1111111
Q ss_pred hhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 354 SDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 354 ~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
. ...... ... ... ...+.+++..||+.+|.+||++.++++.
T Consensus 231 -~-~~~~~~--~~~--~~~----~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 231 -D-SPPPKL--KNA--HKI----SPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred -c-cCCCCc--ccc--CCC----CHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 1 100000 000 011 1357789999999999999999999874
No 436
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.1e-35 Score=316.92 Aligned_cols=256 Identities=20% Similarity=0.300 Sum_probs=187.5
Q ss_pred eeeccCCeEEEEEEECCC--CeEEEEEEecccC-hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEccCCCC
Q 003278 118 VLGSGGFGKVYRAVLPSD--GTVVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPNRS 194 (834)
Q Consensus 118 ~LG~G~fG~Vy~~~~~~~--g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gs 194 (834)
.||+|+||.||+|....+ ...+++|.+.... ....+.|.+|+.+++.++||||++++++|......++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 699999999999976333 2356677765432 3456789999999999999999999999999999999999999999
Q ss_pred HhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhhhh
Q 003278 195 LDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELQY 274 (834)
Q Consensus 195 L~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~ 274 (834)
|.+++.+.... ...+++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||++........
T Consensus 82 L~~~l~~~~~~---~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~- 154 (268)
T cd05086 82 LKSYLSQEQWH---RRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY- 154 (268)
T ss_pred HHHHHHhhhcc---cccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchh-
Confidence 99999754221 23467778889999999999999985 999999999999999999999999999864211100
Q ss_pred hhhcccccccccccccceeeeccccCCCcccccc------CCCCCcccceeehhhHHHHHHhC-CccCCCCCCCccchHH
Q 003278 275 QMRTSSARNHQFHLAETTRIGGTIGYLPPESFQK------GSVATAKSDVFSFGIVVLEVVSG-RRAVDLTYPDDQIILL 347 (834)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~------~~~~~~ksDV~SfGvvl~ElltG-~~p~~~~~~~~~~~l~ 347 (834)
........|+..|+|||++.. ...++.++|||||||++|||+++ ..|+..... .
T Consensus 155 -------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~------~ 215 (268)
T cd05086 155 -------------IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD------R 215 (268)
T ss_pred -------------hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH------H
Confidence 011233458899999998742 12347789999999999999975 556643211 1
Q ss_pred HHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhh
Q 003278 348 DWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVS 406 (834)
Q Consensus 348 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~ 406 (834)
........+ ......++.+.. .+. ..+.++...|| .+|++||+|.+|++.|.
T Consensus 216 ~~~~~~~~~-~~~~~~~~~~~~-~~~----~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 216 EVLNHVIKD-QQVKLFKPQLEL-PYS----ERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred HHHHHHHhh-cccccCCCccCC-CCc----HHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 122222221 122223333321 122 35667888899 57999999999998874
No 437
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.4e-35 Score=325.74 Aligned_cols=203 Identities=18% Similarity=0.256 Sum_probs=164.1
Q ss_pred Cccccc--CCcEEEEEEE-CCCcEEEEEEecCCCC-hhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEeccCC
Q 003278 519 QRVAEM--DFGTAYQGFL-DNHQYVLVKRLGMSKC-PALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSAT 594 (834)
Q Consensus 519 ~~ig~g--~~g~vy~~~~-~~~~~vavK~~~~~~~-~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~~ 594 (834)
+.||+| +||+||++.. .++..||||++..... ....+.+.+|+.+++.++|||||+++++|..++..++||||+++
T Consensus 4 ~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 83 (327)
T cd08227 4 TVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAY 83 (327)
T ss_pred hhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccCC
Confidence 468998 7899999986 5688999999876543 33445678899999999999999999999999999999999999
Q ss_pred CchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCC
Q 003278 595 RILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674 (834)
Q Consensus 595 g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~ 674 (834)
|+|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.++++|||.+..+.....
T Consensus 84 ~~l~~~~~~~~~----~~l~~~~~~~i~~qi~~~L~~LH~---~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~ 156 (327)
T cd08227 84 GSAKDLICTHFM----DGMSELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQ 156 (327)
T ss_pred CcHHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCChhhEEEecCCcEEEcccchhhccccccc
Confidence 999999864321 237899999999999999999996 6899999999999999999999999987644322111
Q ss_pred CCcccccCccccccccCccchhcccc--CCCCccCcchhhHHHHHHHHhCCCccCC
Q 003278 675 GHRKATSGNRSVRGIFGYMSPEYIES--GEATSMADVYSFGVVVLEVVTGQMAVDF 728 (834)
Q Consensus 675 ~~~~~~~~~~~~~Gt~~Y~aPE~~~~--~~~~~k~DV~SfGvvl~E~~tG~~p~~~ 728 (834)
.............++..|||||++.+ ..++.++|||||||++|||+||+.||..
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 212 (327)
T cd08227 157 RLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 212 (327)
T ss_pred cccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 00000111122357788999999975 4589999999999999999999999864
No 438
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.8e-35 Score=314.66 Aligned_cols=253 Identities=23% Similarity=0.400 Sum_probs=197.2
Q ss_pred CCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccCh---------hhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEE
Q 003278 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGE---------RFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQL 183 (834)
Q Consensus 113 f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~---------~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~ 183 (834)
|.....||+|+||.||+|....+++.||+|.+..... ...+.+.+|+.++++++||||+++++++.+.+..
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL 81 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence 6677899999999999999988899999998754321 1235688999999999999999999999999999
Q ss_pred EEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeecc
Q 003278 184 LLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFG 263 (834)
Q Consensus 184 ~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 263 (834)
++||||+++++|.+++... ..+++..+..++.|++.||+|||+. +++||||||+|||+++++.+||+|||
T Consensus 82 ~lv~e~~~~~~L~~~l~~~-------~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg 151 (267)
T cd06628 82 NIFLEYVPGGSVAALLNNY-------GAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFG 151 (267)
T ss_pred EEEEEecCCCCHHHHHHhc-------cCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccC
Confidence 9999999999999998543 3578889999999999999999985 99999999999999999999999999
Q ss_pred chhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCcc
Q 003278 264 LARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQ 343 (834)
Q Consensus 264 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~ 343 (834)
+++.+....... ..........|+..|+|||.+..+ .++.++|||||||++|||+||+.||......
T Consensus 152 ~~~~~~~~~~~~----------~~~~~~~~~~~~~~y~~pe~~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-- 218 (267)
T cd06628 152 ISKKLEANSLST----------KTNGARPSLQGSVFWMAPEVVKQT-SYTRKADIWSLGCLVVEMLTGKHPFPDCTQL-- 218 (267)
T ss_pred CCcccccccccC----------CccccccccCCCcCccChhHhccC-CCCchhhhHHHHHHHHHHhhCCCCCCCccHH--
Confidence 998654221100 000012234589999999988654 5688999999999999999999998643211
Q ss_pred chHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHH
Q 003278 344 IILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIE 403 (834)
Q Consensus 344 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~ 403 (834)
.. +.... . ...+.+. . .....+..++..||+.+|.+||++.+|++
T Consensus 219 ~~----~~~~~-~-----~~~~~~~-~----~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 219 QA----IFKIG-E-----NASPEIP-S----NISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred HH----HHHHh-c-----cCCCcCC-c----ccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 00 11110 0 1111111 1 11246778999999999999999999986
No 439
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.2e-35 Score=314.11 Aligned_cols=249 Identities=21% Similarity=0.321 Sum_probs=197.7
Q ss_pred hCcCcCCcccccCCcEEEEEEECCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEecc
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYS 592 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~ 592 (834)
++|...+.||.|+||.||+|... ++.||||.+..... ..++|.+|+.++++++||||+++++++.+....++||||+
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 82 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST--AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM 82 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh--HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence 45666788999999999999875 67899999875433 4567999999999999999999999999889999999999
Q ss_pred CCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccC
Q 003278 593 ATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRN 672 (834)
Q Consensus 593 ~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~ 672 (834)
++++|.+++..... ..++|..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 83 ~~~~L~~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~ 155 (256)
T cd05039 83 AKGSLVDYLRSRGR----AVITLAQQLGFALDVCEGMEYLEE---KNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQG 155 (256)
T ss_pred CCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCccchhcccceEEEeCCCCEEEcccccccccccc
Confidence 99999999865432 248899999999999999999996 69999999999999999999999999999765221
Q ss_pred CCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcCcccc
Q 003278 673 DHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRPLAE 751 (834)
Q Consensus 673 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (834)
. ....++..|+|||++..+.++.++||||||+++|||++ |..|+...... .+...+. . .....
T Consensus 156 ~----------~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-~~~~~~~---~--~~~~~ 219 (256)
T cd05039 156 Q----------DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-DVVPHVE---K--GYRME 219 (256)
T ss_pred c----------ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH-HHHHHHh---c--CCCCC
Confidence 1 12235668999999998899999999999999999997 88887643222 2111111 0 00001
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHcc
Q 003278 752 LVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDG 796 (834)
Q Consensus 752 ~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~ 796 (834)
. .... ++ .+.+++.+||..+|++|||+.+++.+|+.
T Consensus 220 ~-----~~~~-~~---~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 220 A-----PEGC-PP---EVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred C-----ccCC-CH---HHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 0 1111 22 45566678999999999999999999965
No 440
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=6.6e-36 Score=295.45 Aligned_cols=262 Identities=16% Similarity=0.255 Sum_probs=192.6
Q ss_pred CcCcCCcccccCCcEEEEEE-ECCCcEEEEEEecCCCCh-hHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEec
Q 003278 514 NFSESQRVAEMDFGTAYQGF-LDNHQYVLVKRLGMSKCP-ALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY 591 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~~~-~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey 591 (834)
.|...+++|+|.||.||+|. ..+|+.||||+++...-. .......+||+.|+.++|||||.|++++...+.+-||.||
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf 82 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF 82 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence 35556789999999999999 467899999999865322 2234567899999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccccc
Q 003278 592 SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTR 671 (834)
Q Consensus 592 ~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~ 671 (834)
|+. +|+..+++... .|+-...-.++.++.+||+|||. ..|+||||||.|+|++++|.+||+|||+|+....
T Consensus 83 m~t-dLe~vIkd~~i-----~l~pa~iK~y~~m~LkGl~y~H~---~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~ 153 (318)
T KOG0659|consen 83 MPT-DLEVVIKDKNI-----ILSPADIKSYMLMTLKGLAYCHS---KWILHRDLKPNNLLISSDGQLKIADFGLARFFGS 153 (318)
T ss_pred ccc-cHHHHhccccc-----ccCHHHHHHHHHHHHHHHHHHHh---hhhhcccCCccceEEcCCCcEEeecccchhccCC
Confidence 985 78888876543 47777778899999999999997 6899999999999999999999999999998643
Q ss_pred CCCCCcccccCccccccccCccchhcccc-CCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhc--C-
Q 003278 672 NDHGHRKATSGNRSVRGIFGYMSPEYIES-GEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARK--R- 747 (834)
Q Consensus 672 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~--~- 747 (834)
.... .+.-+-|.-|.|||.+.+ ..|+..+|+||.|||+.||+-|..-+. ...+-+.+..+.+..... +
T Consensus 154 p~~~-------~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fp-G~sDidQL~~If~~LGTP~~~~ 225 (318)
T KOG0659|consen 154 PNRI-------QTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFP-GDSDIDQLSKIFRALGTPTPDQ 225 (318)
T ss_pred CCcc-------cccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCC-CCchHHHHHHHHHHcCCCCccc
Confidence 3211 111256788999998865 469999999999999999999854332 222222222222211110 0
Q ss_pred --cccccccc---------ccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 003278 748 --PLAELVDL---------SLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSI 793 (834)
Q Consensus 748 --~~~~~~d~---------~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~ 793 (834)
.+.++.|. .+..-+ +......+.++...+..||.+|+|++|.++.
T Consensus 226 WP~~~~lpdY~~~~~~P~~~~~~lf-~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 226 WPEMTSLPDYVKIQQFPKPPLNNLF-PAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred CccccccccHHHHhcCCCCcccccc-ccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 01111111 111111 1222345677778999999999999999853
No 441
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-37 Score=335.44 Aligned_cols=410 Identities=21% Similarity=0.261 Sum_probs=308.4
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEcc
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYM 190 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 190 (834)
++|+....+|.|.||.|||+++..++...|||+++-.......-.+.|+-+++..+|||||.++|.+...+.++++||||
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEyc 94 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYC 94 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEec
Confidence 57888999999999999999999999999999998665555667788999999999999999999999999999999999
Q ss_pred CCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhh
Q 003278 191 PNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEH 270 (834)
Q Consensus 191 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~ 270 (834)
.+|+|.+.-+. .++|++.++..+.+...+||.|||++ +-+|||||-.|||+++.+.+|++|||.+-.+..
T Consensus 95 gggslQdiy~~-------TgplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqita 164 (829)
T KOG0576|consen 95 GGGSLQDIYHV-------TGPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITA 164 (829)
T ss_pred CCCcccceeee-------cccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhh
Confidence 99999887654 36889999999999999999999996 889999999999999999999999999875532
Q ss_pred hhhhhhhcccccccccccccceeeeccccCCCcccccc--CCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHH
Q 003278 271 ELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQK--GSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLD 348 (834)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~--~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~ 348 (834)
. +.....+.||+.|||||+..- ...|..++|||+.|+...|+---++|.-.-.+..
T Consensus 165 t----------------i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr------ 222 (829)
T KOG0576|consen 165 T----------------IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMR------ 222 (829)
T ss_pred h----------------hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHH------
Confidence 2 223456789999999997632 2257899999999999999988777743211111
Q ss_pred HHHHHh-hcCcccccccc-ccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcCCCCCCCCCCCccCCCccc
Q 003278 349 WIRRLS-DEGKVLQAGDN-RLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGSYSGKLPALPSFQSHPLYI 426 (834)
Q Consensus 349 ~~~~~~-~~~~~~~~~d~-~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~~~~~~p~~ps~~s~p~~~ 426 (834)
+..+. ..+ .++ .+.+.. .--+.+-++...|+..+|++||+....+..
T Consensus 223 -~l~LmTkS~-----~qpp~lkDk~---kws~~fh~fvK~altknpKkRptaeklL~h---------------------- 271 (829)
T KOG0576|consen 223 -ALFLMTKSG-----FQPPTLKDKT---KWSEFFHNFVKGALTKNPKKRPTAEKLLQH---------------------- 271 (829)
T ss_pred -HHHHhhccC-----CCCCcccCCc---cchHHHHHHHHHHhcCCCccCCChhhheec----------------------
Confidence 11111 111 111 121111 112356788888999999999986643220
Q ss_pred ccCCCCCCCCCCCccccccCcccCCCcccCCCCCcccccccccccccccCCCcCCCCCCccccccCcccccCCCccccHH
Q 003278 427 SLSSPTNTSTSNTETTRSTNTTASNTTIASPSSNYVTAAGETIYATAECGGNTESKSNNSRSQRRNSFFMVETPREISFK 506 (834)
Q Consensus 427 s~ssp~~~s~s~~~~s~ss~ss~s~~~~~spssn~v~a~~~~~~a~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (834)
T Consensus 272 -------------------------------------------------------------------------------- 271 (829)
T KOG0576|consen 272 -------------------------------------------------------------------------------- 271 (829)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhCcCcCCcccccCCcEEEEEEECCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCC-ceeEEEEEeeCCeE
Q 003278 507 EIISATNNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRN-LVQLCGWCTEQGEM 585 (834)
Q Consensus 507 el~~at~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpN-iv~l~g~~~~~~~~ 585 (834)
+.+... ....-++++|.+++||| .|..++-+..++..
T Consensus 272 ------------------------------------~fvs~~------l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~ 309 (829)
T KOG0576|consen 272 ------------------------------------PFVSQT------LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYL 309 (829)
T ss_pred ------------------------------------eeeccc------hhhHHHHHHHHHccCCCCcccccccCCccccc
Confidence 000000 00123678999999999 88888888888889
Q ss_pred EEEEeccCCC-chhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeee
Q 003278 586 LVIYDYSATR-ILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFA 664 (834)
Q Consensus 586 ~lv~Ey~~~g-~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfG 664 (834)
.++++|+..+ +...... .....+...+-..+.+.-+++++|||+. .-+||| |||..+ ...|.+||+
T Consensus 310 ~i~~~i~s~~rs~~~~~~-----~se~~~~~~~~~~~~r~et~~l~~l~~~---~~~~~d----~~l~s~-~~~~~~~~~ 376 (829)
T KOG0576|consen 310 WIPMRICSTGRSSALEMT-----VSEIALEQYQFAYPLRKETRPLAELHSS---YKVHRD----NILGSE-EEVKLLDFA 376 (829)
T ss_pred chhhhhhcCCccccccCC-----hhhHhhhhhhhhhhhhhhcccccccccc---cccCcc----cccccc-ccccccccc
Confidence 9999999887 2221110 0111122233345667788999999973 358999 887665 678999999
Q ss_pred eccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCcc
Q 003278 665 LAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAV 726 (834)
Q Consensus 665 la~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~ 726 (834)
....+++.. ..++..||+.|||||+...+.+..+.|+||.|+--.+|.-|..|.
T Consensus 377 v~~~L~~~~--------~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr 430 (829)
T KOG0576|consen 377 VPPQLTRTM--------KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPR 430 (829)
T ss_pred CCcccCccc--------ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCC
Confidence 987765432 234567999999999999999999999999998777877776654
No 442
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.6e-35 Score=322.71 Aligned_cols=260 Identities=15% Similarity=0.235 Sum_probs=191.4
Q ss_pred hCcCcCCcccccCCcEEEEEEEC-CCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEec
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY 591 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey 591 (834)
++|...+.||+|+||.||+|... ++..||+|.+...........+.+|++++++++||||+++++++...+..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 35677788999999999999864 57789999987554443445678899999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccccc
Q 003278 592 SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTR 671 (834)
Q Consensus 592 ~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~ 671 (834)
+++ +|..++...+ ..+++.....++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 86 ~~~-~l~~~~~~~~-----~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 156 (309)
T cd07872 86 LDK-DLKQYMDDCG-----NIMSMHNVKIFLYQILRGLAYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSV 156 (309)
T ss_pred CCC-CHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECccccceecCC
Confidence 986 6777765432 237788888899999999999996 6999999999999999999999999999975322
Q ss_pred CCCCCcccccCccccccccCccchhcccc-CCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhc----
Q 003278 672 NDHGHRKATSGNRSVRGIFGYMSPEYIES-GEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARK---- 746 (834)
Q Consensus 672 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~---- 746 (834)
.. .......||+.|+|||++.+ ..++.++|||||||++|||+||+.||........+...........
T Consensus 157 ~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 229 (309)
T cd07872 157 PT-------KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETW 229 (309)
T ss_pred Cc-------cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 11 01123467899999998865 4688999999999999999999999865433222111110000000
Q ss_pred ---CccccccccccC-----------CCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 747 ---RPLAELVDLSLN-----------GEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 747 ---~~~~~~~d~~l~-----------~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
....+..+.... ... .. .+.++..+|+..||.+|||+.|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 230 PGISSNDEFKNYNFPKYKPQPLINHAPRL-DT---EGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hhhcchhhhhhhhcCccCCCchhhhccCC-CH---HHHHHHHHhccCChhhCCCHHHHhc
Confidence 000000000000 001 12 3445667999999999999999985
No 443
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-36 Score=330.97 Aligned_cols=242 Identities=18% Similarity=0.242 Sum_probs=190.1
Q ss_pred hCcCcCCcccccCCcEEEEEEEC-CCcEEEEEEecCCC--ChhHHHHHHHHHHHHHhc-cCCCceeEEEEEeeCCeEEEE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSK--CPALRTRFSNELQNLARL-RHRNLVQLCGWCTEQGEMLVI 588 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~f~~E~~~l~~l-~HpNiv~l~g~~~~~~~~~lv 588 (834)
++|.-...+|+|+||+|+.+.++ +++.+|||.++... ..+..+..+.|-.++... +||.+++|++++...+++|+|
T Consensus 368 ~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fv 447 (694)
T KOG0694|consen 368 DDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFV 447 (694)
T ss_pred cceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEE
Confidence 56777888999999999999975 47899999998653 123345677787777766 599999999999999999999
Q ss_pred EeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccc
Q 003278 589 YDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEF 668 (834)
Q Consensus 589 ~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~ 668 (834)
|||+.||++..+.+. ..++.....-+|..|+.||.|||+ .+||+||||-.|||||.+|.+||+|||+++.
T Consensus 448 mey~~Ggdm~~~~~~-------~~F~e~rarfyaAev~l~L~fLH~---~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe 517 (694)
T KOG0694|consen 448 MEYVAGGDLMHHIHT-------DVFSEPRARFYAAEVVLGLQFLHE---NGIIYRDLKLDNLLLDTEGHVKIADFGLCKE 517 (694)
T ss_pred EEecCCCcEEEEEec-------ccccHHHHHHHHHHHHHHHHHHHh---cCceeeecchhheEEcccCcEEecccccccc
Confidence 999999996655432 237787777899999999999997 7999999999999999999999999999986
Q ss_pred cccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCc
Q 003278 669 LTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRP 748 (834)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~ 748 (834)
.... ...+.++|||+.|||||++.+..|+..+|.|||||+||||++|+.||.....+. +...+.. ..
T Consensus 518 ~m~~-------g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee-~FdsI~~----d~- 584 (694)
T KOG0694|consen 518 GMGQ-------GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEE-VFDSIVN----DE- 584 (694)
T ss_pred cCCC-------CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHhc----CC-
Confidence 4321 223567999999999999999999999999999999999999999997543332 2222111 00
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCCh
Q 003278 749 LAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSM 787 (834)
Q Consensus 749 ~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm 787 (834)
..- ..+...+ .+.++.+-+..+|++|--+
T Consensus 585 ---~~y----P~~ls~e---a~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 585 ---VRY----PRFLSKE---AIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred ---CCC----CCcccHH---HHHHHHHHhccCcccccCC
Confidence 011 1122233 3445557788999999877
No 444
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.5e-35 Score=314.29 Aligned_cols=254 Identities=26% Similarity=0.426 Sum_probs=198.3
Q ss_pred cCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEc
Q 003278 110 SNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDY 189 (834)
Q Consensus 110 t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 189 (834)
.++|...++||+|+||.||+|.. .+++.||+|.+.... .....|.+|+.++++++||||+++++++. .+..++||||
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 81 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEY 81 (260)
T ss_pred hHHceeeeeeccCccceEEeeec-CCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEc
Confidence 45688899999999999999997 578899999986543 23467899999999999999999999864 5678999999
Q ss_pred cCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhh
Q 003278 190 MPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLE 269 (834)
Q Consensus 190 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~ 269 (834)
+++|+|.+++.... ...+++.++..++.|++.||+|||+. +++||||||+||++++++.++|+|||+++...
T Consensus 82 ~~~~~L~~~~~~~~-----~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 153 (260)
T cd05067 82 MENGSLVDFLKTPE-----GIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIE 153 (260)
T ss_pred CCCCCHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecC
Confidence 99999999986432 24689999999999999999999985 99999999999999999999999999987543
Q ss_pred hhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCccchHHH
Q 003278 270 HELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQIILLD 348 (834)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~~l~~ 348 (834)
.... .......++..|+|||++..+ .++.++|||||||++|||+| |+.||...... .+..
T Consensus 154 ~~~~---------------~~~~~~~~~~~y~~pe~~~~~-~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---~~~~ 214 (260)
T cd05067 154 DNEY---------------TAREGAKFPIKWTAPEAINYG-TFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP---EVIQ 214 (260)
T ss_pred CCCc---------------ccccCCcccccccCHHHhccC-CcCcccchHHHHHHHHHHHhCCCCCCCCCChH---HHHH
Confidence 1100 001223467889999988654 57889999999999999999 99998643211 1111
Q ss_pred HHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhc
Q 003278 349 WIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSG 407 (834)
Q Consensus 349 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~ 407 (834)
.+ ..+...... .. ....+.+++..|++.+|++||++.++...|+.
T Consensus 215 ---~~-~~~~~~~~~------~~----~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 215 ---NL-ERGYRMPRP------DN----CPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred ---HH-HcCCCCCCC------CC----CCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 11 111111100 11 12468899999999999999999999998763
No 445
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.3e-35 Score=317.81 Aligned_cols=261 Identities=25% Similarity=0.333 Sum_probs=201.8
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC-hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeC--CEEEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHE--DQLLLVY 187 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~--~~~~lV~ 187 (834)
++|+..+.||.|+||.||+|.+..+++.+|+|.+.... ......+.+|++++++++||||++++++|... +.+++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 46888899999999999999998889999999986432 24567789999999999999999999998754 3689999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhh
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARW 267 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 267 (834)
||+++++|.+++..... ....+++.....|+.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++..
T Consensus 81 e~~~~~~L~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~ 154 (287)
T cd06621 81 EYCEGGSLDSIYKKVKK---RGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGE 154 (287)
T ss_pred EecCCCCHHHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecccccc
Confidence 99999999988754321 235688899999999999999999985 999999999999999999999999999864
Q ss_pred hhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCC--ccch
Q 003278 268 LEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPD--DQII 345 (834)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~--~~~~ 345 (834)
.... ......++..|+|||.+... .++.++|||||||++|||+||+.|+...... ....
T Consensus 155 ~~~~------------------~~~~~~~~~~y~~pE~~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~ 215 (287)
T cd06621 155 LVNS------------------LAGTFTGTSFYMAPERIQGK-PYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIE 215 (287)
T ss_pred cccc------------------ccccccCCccccCHHHhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHH
Confidence 3211 01234578899999988654 6788999999999999999999998754321 1112
Q ss_pred HHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 346 LLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 346 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
+..|+.. .......+... ....-...+.+++..||+.+|.+||+|.||++.
T Consensus 216 ~~~~~~~----~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 216 LLSYIVN----MPNPELKDEPG----NGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred HHHHHhc----CCchhhccCCC----CCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 2222221 11111111110 001123568899999999999999999999874
No 446
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-37 Score=331.26 Aligned_cols=251 Identities=24% Similarity=0.387 Sum_probs=202.7
Q ss_pred CCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEccCC
Q 003278 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPN 192 (834)
Q Consensus 113 f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 192 (834)
|++...||.|+||.||+|+.+.++-..|-|++..+.+...+.|+-||.+|+...||+||+|++.|+.++.+++..|||+|
T Consensus 34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~G 113 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGG 113 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCC
Confidence 55667899999999999999988888999999888888888999999999999999999999999999999999999999
Q ss_pred CCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhh
Q 003278 193 RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHEL 272 (834)
Q Consensus 193 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~ 272 (834)
|-.+.++..- ..+|+..++.-+++|++.||.|||++ .|||||||..|||++-+|.++|+|||.+-......
T Consensus 114 GAVDaimlEL------~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~ 184 (1187)
T KOG0579|consen 114 GAVDAIMLEL------GRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTR 184 (1187)
T ss_pred chHhHHHHHh------ccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchhHH
Confidence 9999887543 46799999999999999999999996 99999999999999999999999999875432221
Q ss_pred hhhhhcccccccccccccceeeeccccCCCcccccc----CCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHH
Q 003278 273 QYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQK----GSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLD 348 (834)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~----~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~ 348 (834)
+ ...++.|||.|||||+... ...|+.++||||||++|.||.-+.+|...-.+ ..
T Consensus 185 q----------------kRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp------MR 242 (1187)
T KOG0579|consen 185 Q----------------KRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP------MR 242 (1187)
T ss_pred h----------------hhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch------HH
Confidence 1 1346789999999998743 45789999999999999999999988643211 11
Q ss_pred HHHHHhhcCccccccccccC-CCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 349 WIRRLSDEGKVLQAGDNRLS-DGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 349 ~~~~~~~~~~~~~~~d~~l~-~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
.+..+... -.|.+. +..+. ..+.++...||..||..||+..++++.
T Consensus 243 VllKiaKS------ePPTLlqPS~Ws----~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 243 VLLKIAKS------EPPTLLQPSHWS----RSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred HHHHHhhc------CCCcccCcchhh----hHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 11111111 111111 11111 346788899999999999999888754
No 447
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.2e-35 Score=318.49 Aligned_cols=257 Identities=18% Similarity=0.291 Sum_probs=198.7
Q ss_pred hCcCcCCcccccCCcEEEEEEECC-Cc----EEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLDN-HQ----YVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLV 587 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~~-~~----~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~l 587 (834)
.+|...+.||+|+||.||+|...+ +. .+|+|.+...........|.+|+.++++++||||++++|+|.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 345667889999999999998643 32 5899988766555556789999999999999999999999987 78899
Q ss_pred EEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecc
Q 003278 588 IYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAE 667 (834)
Q Consensus 588 v~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~ 667 (834)
||||+++|+|.+++..... .+++...+.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++
T Consensus 86 v~e~~~~g~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kL~dfg~~~ 157 (279)
T cd05057 86 ITQLMPLGCLLDYVRNHKD-----NIGSQYLLNWCVQIAKGMSYLEE---KRLVHRDLAARNVLVKTPQHVKITDFGLAK 157 (279)
T ss_pred EEecCCCCcHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHh---CCEEecccCcceEEEcCCCeEEECCCcccc
Confidence 9999999999999875432 38899999999999999999997 699999999999999999999999999998
Q ss_pred ccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhc
Q 003278 668 FLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARK 746 (834)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~ 746 (834)
.+....... ......++..|||||.+..+.++.++|||||||++||++| |+.|+....+.. +...+. ..
T Consensus 158 ~~~~~~~~~-----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~~~~~~----~~ 227 (279)
T cd05057 158 LLDVDEKEY-----HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE-IPDLLE----KG 227 (279)
T ss_pred cccCcccce-----ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH-HHHHHh----CC
Confidence 754322110 0111234678999999988899999999999999999999 999986543322 111111 11
Q ss_pred CccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccCC
Q 003278 747 RPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGND 798 (834)
Q Consensus 747 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~~ 798 (834)
... .. ..... ..+..++.+||..+|.+|||+.++++.|+...
T Consensus 228 ~~~---~~---~~~~~----~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~ 269 (279)
T cd05057 228 ERL---PQ---PPICT----IDVYMVLVKCWMIDAESRPTFKELINEFSKMA 269 (279)
T ss_pred CCC---CC---CCCCC----HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 110 00 11111 23456667999999999999999999987653
No 448
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.2e-35 Score=316.85 Aligned_cols=255 Identities=23% Similarity=0.339 Sum_probs=197.3
Q ss_pred CcCcCCcccccCCcEEEEEEECC----CcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEE
Q 003278 514 NFSESQRVAEMDFGTAYQGFLDN----HQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIY 589 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~ 589 (834)
+|...+.||+|+||.||+|...+ ...|+||...........+.|.+|+.++++++||||++++++|.+ +..++||
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~ 85 (270)
T cd05056 7 DITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVM 85 (270)
T ss_pred hceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEE
Confidence 45566789999999999998643 246899988765545566789999999999999999999999876 4578999
Q ss_pred eccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccc
Q 003278 590 DYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFL 669 (834)
Q Consensus 590 Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~ 669 (834)
||+++|+|.+++.... ..++|..++.++.|++.||+|||+ .+++||||||+|||++.++.+|++|||+++..
T Consensus 86 e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~ 157 (270)
T cd05056 86 ELAPLGELRSYLQVNK-----YSLDLASLILYSYQLSTALAYLES---KRFVHRDIAARNVLVSSPDCVKLGDFGLSRYL 157 (270)
T ss_pred EcCCCCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccChheEEEecCCCeEEccCceeeec
Confidence 9999999999986532 237899999999999999999996 68999999999999999999999999999765
Q ss_pred ccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcCc
Q 003278 670 TRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRP 748 (834)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 748 (834)
..... .......++..|+|||++....++.++|||||||++|||++ |..||......... ... ......
T Consensus 158 ~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~-~~~---~~~~~~ 227 (270)
T cd05056 158 EDESY------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVI-GRI---ENGERL 227 (270)
T ss_pred ccccc------eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHH-HHH---HcCCcC
Confidence 43211 01112345578999999988889999999999999999996 99998644322211 111 111111
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccCC
Q 003278 749 LAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGND 798 (834)
Q Consensus 749 ~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~~ 798 (834)
..... .+. .+.+++.+||..+|++|||+.++++.|+.+.
T Consensus 228 -------~~~~~-~~~---~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~ 266 (270)
T cd05056 228 -------PMPPN-CPP---TLYSLMTKCWAYDPSKRPRFTELKAQLSDIL 266 (270)
T ss_pred -------CCCCC-CCH---HHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 01111 122 3555666999999999999999999997754
No 449
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.5e-35 Score=317.30 Aligned_cols=250 Identities=24% Similarity=0.414 Sum_probs=199.5
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc-ChhhHHHHHHHHHHHHhCC---CCceeeEeeeEEeCCEEEEEE
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK-GERFEKTFAAELVAVAHLR---HRNLVRLRGWCVHEDQLLLVY 187 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~---H~nIv~l~g~~~~~~~~~lV~ 187 (834)
.|+..+.||+|+||.||+|.+..++..||||.+... .....+.+.+|+.++++++ ||||++++++|...+..++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 477788999999999999999889999999998653 2334567889999999987 999999999999999999999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhh
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARW 267 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 267 (834)
||+++++|.+++.. ..+++.....++.|++.||.|||+. +|+|+||+|+||+++.++.++|+|||++..
T Consensus 82 e~~~~~~L~~~~~~--------~~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~ 150 (277)
T cd06917 82 EYAEGGSVRTLMKA--------GPIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAAL 150 (277)
T ss_pred ecCCCCcHHHHHHc--------cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceee
Confidence 99999999998743 2588999999999999999999985 999999999999999999999999999875
Q ss_pred hhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHH
Q 003278 268 LEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347 (834)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~ 347 (834)
+.... .......|+..|+|||++..+..++.++|||||||++|||++|+.|+......
T Consensus 151 ~~~~~----------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~------ 208 (277)
T cd06917 151 LNQNS----------------SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF------ 208 (277)
T ss_pred cCCCc----------------cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh------
Confidence 43211 01223458999999999876666789999999999999999999998643211
Q ss_pred HHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 348 DWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 348 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
.+.... .. ...+.+.... ....+.+++..||+.||++||++.+++..
T Consensus 209 ~~~~~~-~~-----~~~~~~~~~~----~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 209 RAMMLI-PK-----SKPPRLEDNG----YSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred hhhhcc-cc-----CCCCCCCccc----CCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 111100 00 0111111111 12467889999999999999999999863
No 450
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.2e-35 Score=325.94 Aligned_cols=192 Identities=17% Similarity=0.213 Sum_probs=162.3
Q ss_pred HhhCcCcCCcccccCCcEEEEEEEC-CCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEE
Q 003278 511 ATNNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIY 589 (834)
Q Consensus 511 at~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~ 589 (834)
...+|...+.||+|+||.||+|... ++..||+|..... ....|+.++++++|||||++++++.+.+..++||
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 136 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVL 136 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEE
Confidence 3467899999999999999999975 4678999974322 2356999999999999999999999999999999
Q ss_pred eccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccc
Q 003278 590 DYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFL 669 (834)
Q Consensus 590 Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~ 669 (834)
||+. ++|..++.... ..++|..+..|+.|++.||+|||+ .+||||||||+|||++.++.+||+|||+++..
T Consensus 137 e~~~-~~l~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 207 (357)
T PHA03209 137 PHYS-SDLYTYLTKRS-----RPLPIDQALIIEKQILEGLRYLHA---QRIIHRDVKTENIFINDVDQVCIGDLGAAQFP 207 (357)
T ss_pred EccC-CcHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEecCcccccc
Confidence 9995 57777775432 248899999999999999999997 68999999999999999999999999999753
Q ss_pred ccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCcc
Q 003278 670 TRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAV 726 (834)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~ 726 (834)
... .......||+.|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 208 ~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 208 VVA--------PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred ccC--------cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 211 1122457999999999999999999999999999999999976665
No 451
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=2.2e-35 Score=314.17 Aligned_cols=252 Identities=22% Similarity=0.326 Sum_probs=191.4
Q ss_pred hCcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCC----ChhHHHHHHHHHHHHHhccCCCceeEEEEEee--CCeE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSK----CPALRTRFSNELQNLARLRHRNLVQLCGWCTE--QGEM 585 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~----~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~--~~~~ 585 (834)
.+|...+.||+|+||.||+|.. .++..|++|.+.... .......+.+|+.++++++||||+++++++.+ ....
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 4788889999999999999986 458899999876432 12234578899999999999999999998865 3568
Q ss_pred EEEEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeee
Q 003278 586 LVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFAL 665 (834)
Q Consensus 586 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGl 665 (834)
++++||+++++|.+++.... .+++.....++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~LH~---~~i~H~~l~p~nil~~~~~~~~l~dfg~ 152 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG------ALTESVTRKYTRQILEGMSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGA 152 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCCC
Confidence 89999999999999886432 37788888999999999999996 6899999999999999999999999999
Q ss_pred ccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhh
Q 003278 666 AEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEAR 745 (834)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~ 745 (834)
++.+..... .........|+..|+|||++.+..++.++|||||||++|||+||+.|+........ .....
T Consensus 153 ~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~----~~~~~-- 222 (266)
T cd06651 153 SKRLQTICM----SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAA----IFKIA-- 222 (266)
T ss_pred ccccccccc----cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHH----HHHHh--
Confidence 976432110 01112235689999999999988899999999999999999999999864322111 11110
Q ss_pred cCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 746 KRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 746 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
... ..+.+.. .+...++.+++||..+|++||||.+|++
T Consensus 223 ~~~----~~~~~~~-----~~~~~~~~li~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 223 TQP----TNPQLPS-----HISEHARDFLGCIFVEARHRPSAEELLR 260 (266)
T ss_pred cCC----CCCCCch-----hcCHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000 0111111 1112223334799999999999999974
No 452
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.2e-35 Score=331.38 Aligned_cols=198 Identities=26% Similarity=0.319 Sum_probs=166.5
Q ss_pred cCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc--ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeC------C
Q 003278 110 SNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK--GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHE------D 181 (834)
Q Consensus 110 t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~------~ 181 (834)
.++|...+.||+|+||.||+|....+++.||||++... .....+.+.+|+.+++.++||||+++++++... .
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~ 102 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 102 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence 46799999999999999999999889999999998643 233456788999999999999999999987643 3
Q ss_pred EEEEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEee
Q 003278 182 QLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGD 261 (834)
Q Consensus 182 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~D 261 (834)
..|+||||+++ +|...+. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 103 ~~~lv~e~~~~-~l~~~~~---------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~D 169 (364)
T cd07875 103 DVYIVMELMDA-NLCQVIQ---------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILD 169 (364)
T ss_pred eEEEEEeCCCC-CHHHHHH---------hcCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEe
Confidence 57999999975 6666663 2377889999999999999999985 999999999999999999999999
Q ss_pred ccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCC
Q 003278 262 FGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLT 338 (834)
Q Consensus 262 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~ 338 (834)
||+++...... ..+...||+.|+|||++... .++.++|||||||++|||+||+.||...
T Consensus 170 fG~a~~~~~~~-----------------~~~~~~~t~~y~aPE~~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~ 228 (364)
T cd07875 170 FGLARTAGTSF-----------------MMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGT 228 (364)
T ss_pred CCCccccCCCC-----------------cccCCcccCCcCCHHHHhCC-CCCchhhHHhHHHHHHHHHhCCCCCCCC
Confidence 99997532110 12334689999999998654 6789999999999999999999998643
No 453
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=3.4e-35 Score=310.47 Aligned_cols=249 Identities=24% Similarity=0.410 Sum_probs=198.2
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC-----hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEE
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG-----ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLV 186 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~-----~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 186 (834)
+|+..+.||+|+||.||+|....++..||+|.+.... ....+.+.+|+.+++.++|+||+++++++...+..++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 3667789999999999999998789999999875432 23456789999999999999999999999999999999
Q ss_pred EEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchh
Q 003278 187 YDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLAR 266 (834)
Q Consensus 187 ~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 266 (834)
|||+++++|.+++... ..+++..+..++.|+++||+|||+. +|+|+||||+||+++.++.+||+|||++.
T Consensus 81 ~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~ 150 (258)
T cd06632 81 LELVPGGSLAKLLKKY-------GSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAK 150 (258)
T ss_pred EEecCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccce
Confidence 9999999999998642 3588999999999999999999985 99999999999999999999999999987
Q ss_pred hhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchH
Q 003278 267 WLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIIL 346 (834)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l 346 (834)
...... ......|++.|+|||.+.....++.++|+|||||++|||++|+.||......
T Consensus 151 ~~~~~~-----------------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~----- 208 (258)
T cd06632 151 QVVEFS-----------------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGV----- 208 (258)
T ss_pred eccccc-----------------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHH-----
Confidence 542211 1233458999999999865533788999999999999999999998643211
Q ss_pred HHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHH
Q 003278 347 LDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIE 403 (834)
Q Consensus 347 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~ 403 (834)
.............. +. ... ...+.++...||+.+|.+||++.+++.
T Consensus 209 -~~~~~~~~~~~~~~-~~-----~~~----~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 209 -AAVFKIGRSKELPP-IP-----DHL----SDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred -HHHHHHHhcccCCC-cC-----CCc----CHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 11111111111111 10 111 245678899999999999999999985
No 454
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=2.2e-35 Score=314.06 Aligned_cols=256 Identities=25% Similarity=0.377 Sum_probs=199.0
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC------hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEE
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG------ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLL 185 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~------~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 185 (834)
+|+..+.||+|+||.||+|....++..||+|.+.... ....+.+.+|+.++++++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 4778899999999999999998899999999986432 2245678999999999999999999999999999999
Q ss_pred EEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCC-ceEEeeccc
Q 003278 186 VYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQY-NARLGDFGL 264 (834)
Q Consensus 186 V~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~-~~kl~DFGl 264 (834)
||||+++++|.+++... .++++..+..++.|++.||.|||+. +++||||||+||+++.++ .+||+|||+
T Consensus 81 v~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~ 150 (268)
T cd06630 81 FVEWMAGGSVSHLLSKY-------GAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGA 150 (268)
T ss_pred EEeccCCCcHHHHHHHh-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccccc
Confidence 99999999999998642 3688999999999999999999985 999999999999998765 599999999
Q ss_pred hhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccc
Q 003278 265 ARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQI 344 (834)
Q Consensus 265 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~ 344 (834)
+..+...... . ........||..|+|||.+.. ..++.++||||+||+++||++|+.|+........
T Consensus 151 ~~~~~~~~~~-----~-------~~~~~~~~~~~~~~~PE~~~~-~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~- 216 (268)
T cd06630 151 AARLAAKGTG-----A-------GEFQGQLLGTIAFMAPEVLRG-EQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH- 216 (268)
T ss_pred cccccccccc-----C-------CccccccccccceeCHhHhcc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch-
Confidence 8765332100 0 001223468999999998854 4678999999999999999999999864322111
Q ss_pred hHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHH
Q 003278 345 ILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIE 403 (834)
Q Consensus 345 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~ 403 (834)
...+........ . ...+......+.+++..|++.+|.+||++.+++.
T Consensus 217 --~~~~~~~~~~~~-----~-----~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 217 --LALIFKIASATT-----A-----PSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred --HHHHHHHhccCC-----C-----CCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 111111111000 0 1111112245788999999999999999999875
No 455
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=2.7e-35 Score=314.34 Aligned_cols=257 Identities=24% Similarity=0.389 Sum_probs=197.0
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC----------hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCC
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG----------ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHED 181 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~----------~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~ 181 (834)
+|...+.||+|+||.||+|....+|+.||||.+.... ....+.+.+|+.++++++||||+++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 3567789999999999999998889999999875311 112356788999999999999999999999999
Q ss_pred EEEEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEee
Q 003278 182 QLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGD 261 (834)
Q Consensus 182 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~D 261 (834)
..++||||+++|+|.+++.+. ..+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+|
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~-------~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d 151 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY-------GRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISD 151 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc-------cCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEee
Confidence 999999999999999998643 4688999999999999999999985 999999999999999999999999
Q ss_pred ccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCC-CCCcccceeehhhHHHHHHhCCccCCCCCC
Q 003278 262 FGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGS-VATAKSDVFSFGIVVLEVVSGRRAVDLTYP 340 (834)
Q Consensus 262 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~-~~~~ksDV~SfGvvl~ElltG~~p~~~~~~ 340 (834)
||+++...... .........|+..|+|||.+.... .++.++||||||++++|+++|+.|+.....
T Consensus 152 ~~~~~~~~~~~--------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~ 217 (272)
T cd06629 152 FGISKKSDDIY--------------DNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA 217 (272)
T ss_pred ccccccccccc--------------cccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch
Confidence 99987532110 001123456899999999886543 368899999999999999999999853211
Q ss_pred CccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 341 DDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 341 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
...+ ....... .....+.... . .-...+.+++..||+.+|+.||+|.+|++.
T Consensus 218 -----~~~~-~~~~~~~-~~~~~~~~~~-~----~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 218 -----IAAM-FKLGNKR-SAPPIPPDVS-M----NLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred -----HHHH-HHhhccc-cCCcCCcccc-c----cCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 1111 1111111 1111111110 0 112467889999999999999999999864
No 456
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=2.5e-35 Score=316.05 Aligned_cols=256 Identities=26% Similarity=0.418 Sum_probs=199.2
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCe----EEEEEEecccC-hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGT----VVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLL 185 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~----~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 185 (834)
.+|...+.||+|+||.||+|.++.+|. .||+|.+.... ......+.+|+.++.+++||||++++++|.. +..++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 457778999999999999999866654 68999876543 3345678999999999999999999999987 78999
Q ss_pred EEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccch
Q 003278 186 VYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLA 265 (834)
Q Consensus 186 V~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 265 (834)
||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 86 v~e~~~~g~L~~~l~~~~------~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~ 156 (279)
T cd05057 86 ITQLMPLGCLLDYVRNHK------DNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLA 156 (279)
T ss_pred EEecCCCCcHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCccc
Confidence 999999999999986532 3589999999999999999999985 9999999999999999999999999999
Q ss_pred hhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCccc
Q 003278 266 RWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQI 344 (834)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~ 344 (834)
+.+...... . ......++..|+|||.+..+ .++.++|||||||++||++| |+.|++.....
T Consensus 157 ~~~~~~~~~-----------~---~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--- 218 (279)
T cd05057 157 KLLDVDEKE-----------Y---HAEGGKVPIKWMALESILHR-IYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV--- 218 (279)
T ss_pred ccccCcccc-----------e---ecCCCcccccccCHHHhhcC-CcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH---
Confidence 865321100 0 01112246789999988654 57889999999999999999 99998643211
Q ss_pred hHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcC
Q 003278 345 ILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGS 408 (834)
Q Consensus 345 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~ 408 (834)
++.... ..+... ..+ ... ...+..++..||..+|..||++.++++.|...
T Consensus 219 ---~~~~~~-~~~~~~--~~~----~~~----~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~ 268 (279)
T cd05057 219 ---EIPDLL-EKGERL--PQP----PIC----TIDVYMVLVKCWMIDAESRPTFKELINEFSKM 268 (279)
T ss_pred ---HHHHHH-hCCCCC--CCC----CCC----CHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 111111 111111 001 111 13577889999999999999999999998764
No 457
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=3.6e-35 Score=310.43 Aligned_cols=251 Identities=29% Similarity=0.392 Sum_probs=198.4
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc--ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeC-CEEEEEEE
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK--GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHE-DQLLLVYD 188 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~-~~~~lV~E 188 (834)
+|+..+.||+|+||.||++....+++.||+|.+... .....+.+.+|+.++++++|+||+++++.+... +.+++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 477889999999999999999888999999998643 234456788999999999999999999987644 46899999
Q ss_pred ccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhh
Q 003278 189 YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWL 268 (834)
Q Consensus 189 y~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 268 (834)
|+++++|.+++.... ...+++.++..++.+++.||+|||+. +|+||||||+||+++.++.++|+|||+++.+
T Consensus 81 ~~~~~~l~~~l~~~~-----~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~ 152 (257)
T cd08223 81 FCEGGDLYHKLKEQK-----GKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVL 152 (257)
T ss_pred ccCCCcHHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEe
Confidence 999999999986532 24589999999999999999999985 9999999999999999999999999998754
Q ss_pred hhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHH
Q 003278 269 EHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLD 348 (834)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~ 348 (834)
.... .......|++.|+|||.+... .++.++|||||||+++||+||+.|++... ...
T Consensus 153 ~~~~----------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~~l~~g~~~~~~~~------~~~ 209 (257)
T cd08223 153 ENQC----------------DMASTLIGTPYYMSPELFSNK-PYNYKSDVWALGCCVYEMATLKHAFNAKD------MNS 209 (257)
T ss_pred cccC----------------CccccccCCcCccChhHhcCC-CCCchhhhHHHHHHHHHHHcCCCCCCCCC------HHH
Confidence 3210 012334589999999988654 57889999999999999999999986422 112
Q ss_pred HHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 349 WIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 349 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
+..... .+.... +. .. ....+.+++..|++.+|.+||++.+++..
T Consensus 210 ~~~~~~-~~~~~~-----~~-~~----~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 210 LVYRII-EGKLPP-----MP-KD----YSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred HHHHHH-hcCCCC-----Cc-cc----cCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 222211 122111 10 11 12468899999999999999999999863
No 458
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.5e-35 Score=313.25 Aligned_cols=250 Identities=22% Similarity=0.281 Sum_probs=196.2
Q ss_pred cCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEeccC
Q 003278 515 FSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSA 593 (834)
Q Consensus 515 f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~ 593 (834)
|...+.||+|+||.||++.. .++..+|+|.+.........+.+.+|+.++++++||||+++++++.+.+..+++|||++
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 81 (255)
T cd08219 2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCD 81 (255)
T ss_pred ceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCC
Confidence 45567899999999999985 45788999988655444455778899999999999999999999999999999999999
Q ss_pred CCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCC
Q 003278 594 TRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRND 673 (834)
Q Consensus 594 ~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~ 673 (834)
+|+|.+++.... ...+++.....++.|++.||.|||+ .+|+|+||||+||++++++.++++|||++.......
T Consensus 82 ~~~l~~~~~~~~----~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 154 (255)
T cd08219 82 GGDLMQKIKLQR----GKLFPEDTILQWFVQMCLGVQHIHE---KRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG 154 (255)
T ss_pred CCcHHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEECCCCcEEEcccCcceeecccc
Confidence 999998875432 1246788888999999999999996 699999999999999999999999999997653221
Q ss_pred CCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCcccccc
Q 003278 674 HGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELV 753 (834)
Q Consensus 674 ~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (834)
. ......|++.|+|||++.+..++.++||||||+++|||++|..|+........ .... .. .....
T Consensus 155 ~-------~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~-~~~~---~~--~~~~~-- 219 (255)
T cd08219 155 A-------YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNL-ILKV---CQ--GSYKP-- 219 (255)
T ss_pred c-------ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHH-HHHH---hc--CCCCC--
Confidence 1 11235689999999999988899999999999999999999999864332211 1111 10 11100
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 003278 754 DLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSI 793 (834)
Q Consensus 754 d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~ 793 (834)
+....+ . .+..++.+||+.||++|||+.+|+..
T Consensus 220 ---~~~~~~-~---~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 220 ---LPSHYS-Y---ELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ---CCcccC-H---HHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 111111 2 34456669999999999999999864
No 459
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=5e-35 Score=337.01 Aligned_cols=203 Identities=19% Similarity=0.275 Sum_probs=163.1
Q ss_pred HHHHHhhCcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCC------CceeEEEEE
Q 003278 507 EIISATNNFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHR------NLVQLCGWC 579 (834)
Q Consensus 507 el~~at~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~Hp------Niv~l~g~~ 579 (834)
++...+++|...+.||+|+||+||+|.. ..+..||||+++.. ......+..|++++.+++|. ||+++++++
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~ 200 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNV--PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF 200 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecc--hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence 3444578899899999999999999986 45788999998632 22234566788888887665 488898888
Q ss_pred eeC-CeEEEEEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCC--
Q 003278 580 TEQ-GEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDM-- 656 (834)
Q Consensus 580 ~~~-~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~-- 656 (834)
... +..++|||++ +++|.+++...+ .+++.....|+.||+.||+|||+. .+||||||||+||||+.++
T Consensus 201 ~~~~~~~~iv~~~~-g~~l~~~l~~~~------~l~~~~~~~i~~qi~~aL~yLH~~--~gIiHrDlKP~NILl~~~~~~ 271 (467)
T PTZ00284 201 QNETGHMCIVMPKY-GPCLLDWIMKHG------PFSHRHLAQIIFQTGVALDYFHTE--LHLMHTDLKPENILMETSDTV 271 (467)
T ss_pred EcCCceEEEEEecc-CCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhc--CCeecCCCCHHHEEEecCCcc
Confidence 654 5788999988 566777765432 488888999999999999999962 4899999999999998765
Q ss_pred --------------CceEeeeeeccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhC
Q 003278 657 --------------NPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTG 722 (834)
Q Consensus 657 --------------~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG 722 (834)
.+||+|||++.... ......+||+.|||||++.+..|+.++|||||||++|||+||
T Consensus 272 ~~~~~~~~~~~~~~~vkl~DfG~~~~~~----------~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG 341 (467)
T PTZ00284 272 VDPVTNRALPPDPCRVRICDLGGCCDER----------HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTG 341 (467)
T ss_pred cccccccccCCCCceEEECCCCccccCc----------cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhC
Confidence 48999999875321 112356899999999999999999999999999999999999
Q ss_pred CCccCCCC
Q 003278 723 QMAVDFRL 730 (834)
Q Consensus 723 ~~p~~~~~ 730 (834)
+.||+...
T Consensus 342 ~~pf~~~~ 349 (467)
T PTZ00284 342 KLLYDTHD 349 (467)
T ss_pred CCCCCCCC
Confidence 99997543
No 460
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-36 Score=330.61 Aligned_cols=246 Identities=20% Similarity=0.282 Sum_probs=190.1
Q ss_pred cccccCCcEEEEEEEC-CCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEeccCCCchh
Q 003278 520 RVAEMDFGTAYQGFLD-NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSATRILS 598 (834)
Q Consensus 520 ~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~~g~L~ 598 (834)
.+|+|.||+||.|+.. +...+|||.+....+ ...+-+..||.+.++|+|.|||+++|.|.+++.+.|.||-+|||+|.
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekds-r~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDS-REVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccc-hhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 4799999999999954 455689999865443 33456788999999999999999999999999999999999999999
Q ss_pred hhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeec-CCCCceEeeeeeccccccCCCCCc
Q 003278 599 HLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLD-PDMNPRLGSFALAEFLTRNDHGHR 677 (834)
Q Consensus 599 ~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld-~~~~~ki~DfGla~~~~~~~~~~~ 677 (834)
.+|+..=.+.. -.+.+.--+.+||++||.|||+ ..|||||||-.|||++ -.|.+||+|||-++.+..-
T Consensus 661 sLLrskWGPlK---DNEstm~fYtkQILeGLkYLHe---n~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi----- 729 (1226)
T KOG4279|consen 661 SLLRSKWGPLK---DNESTMNFYTKQILEGLKYLHE---NKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI----- 729 (1226)
T ss_pred HHHHhccCCCc---cchhHHHHHHHHHHHHhhhhhh---cceeeccccCCcEEEeeccceEEecccccchhhccC-----
Confidence 99986422111 1344455688999999999997 6899999999999997 5789999999999865432
Q ss_pred ccccCccccccccCccchhccccCC--CCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCcccccccc
Q 003278 678 KATSGNRSVRGIFGYMSPEYIESGE--ATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVDL 755 (834)
Q Consensus 678 ~~~~~~~~~~Gt~~Y~aPE~~~~~~--~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 755 (834)
.+.+.++.||..|||||++..|+ |+..+|||||||++.||.||+.||...-.+...+-.+- +... . |
T Consensus 730 --nP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVG-myKv-H-------P 798 (1226)
T KOG4279|consen 730 --NPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVG-MYKV-H-------P 798 (1226)
T ss_pred --CccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhc-ceec-C-------C
Confidence 23456789999999999998765 78899999999999999999999964332222111111 1111 1 1
Q ss_pred ccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 756 SLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 756 ~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
.+ +.+--.+....+++|..+||.+||++.++++
T Consensus 799 ~i----Peelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 799 PI----PEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred CC----cHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 11 1222234556778999999999999999875
No 461
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=7.4e-35 Score=309.79 Aligned_cols=255 Identities=26% Similarity=0.400 Sum_probs=196.0
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC------hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEE
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG------ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLL 185 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~------~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 185 (834)
+|...+.||+|+||.||+|.. .+|..+|||.+.... ....+.+.+|+.++++++|+||++++++|.+.+..++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 79 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI 79 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence 367788999999999999987 578999999875431 2234568899999999999999999999999999999
Q ss_pred EEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccch
Q 003278 186 VYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLA 265 (834)
Q Consensus 186 V~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 265 (834)
||||+++++|.+++.+. .++++..+..++.|++.||+|||+. +|+|+||||+||++++++.+||+|||++
T Consensus 80 v~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~ 149 (265)
T cd06631 80 FMEFVPGGSISSILNRF-------GPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCA 149 (265)
T ss_pred EEecCCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhh
Confidence 99999999999998643 3578899999999999999999985 8999999999999999999999999998
Q ss_pred hhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccch
Q 003278 266 RWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII 345 (834)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~ 345 (834)
+........ ...........||..|+|||++... .++.++|||||||++|||+||+.||.......
T Consensus 150 ~~~~~~~~~----------~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~--- 215 (265)
T cd06631 150 RRLAWVGLH----------GTHSNMLKSMHGTPYWMAPEVINES-GYGRKSDIWSIGCTVFEMATGKPPLASMDRLA--- 215 (265)
T ss_pred Hhhhhcccc----------ccccccccccCCCccccChhhhcCC-CCcchhhHHHHHHHHHHHHhCCCccccCChHH---
Confidence 754221000 0000112335689999999998654 56889999999999999999999986432111
Q ss_pred HHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHH
Q 003278 346 LLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIE 403 (834)
Q Consensus 346 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~ 403 (834)
.........+. .+.+. ..+ ...+..++..||+.+|.+||++.+|+.
T Consensus 216 --~~~~~~~~~~~-----~~~~~-~~~----~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 216 --AMFYIGAHRGL-----MPRLP-DSF----SAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred --HHHHhhhccCC-----CCCCC-CCC----CHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000000011 11111 111 245788999999999999999999875
No 462
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=2e-35 Score=312.35 Aligned_cols=251 Identities=24% Similarity=0.415 Sum_probs=197.1
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEcc
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYM 190 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 190 (834)
.+|+..+.||+|+||.||+|.+. ++..+|+|.+.... .....|.+|+.++++++||||+++++++......++||||+
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFM 81 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcC
Confidence 45777889999999999999984 57789999886432 23457899999999999999999999999999999999999
Q ss_pred CCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhh
Q 003278 191 PNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEH 270 (834)
Q Consensus 191 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~ 270 (834)
++|+|.+++.... ..++|..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++....
T Consensus 82 ~~~~L~~~~~~~~------~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~ 152 (256)
T cd05112 82 EHGCLSDYLRAQR------GKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLD 152 (256)
T ss_pred CCCcHHHHHHhCc------cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeeccc
Confidence 9999999986432 3588999999999999999999985 899999999999999999999999999875422
Q ss_pred hhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCccchHHHH
Q 003278 271 ELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQIILLDW 349 (834)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~~l~~~ 349 (834)
... .......++.+|+|||++..+ .++.++|||||||++|||++ |+.|+..... ...
T Consensus 153 ~~~---------------~~~~~~~~~~~~~aPe~~~~~-~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~------~~~ 210 (256)
T cd05112 153 DQY---------------TSSTGTKFPVKWSSPEVFSFS-KYSSKSDVWSFGVLMWEVFSEGKTPYENRSN------SEV 210 (256)
T ss_pred Ccc---------------cccCCCccchhhcCHhHhccC-CcChHHHHHHHHHHHHHHHcCCCCCCCcCCH------HHH
Confidence 100 001122356789999988654 57889999999999999998 8888864221 111
Q ss_pred HHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHh
Q 003278 350 IRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAV 405 (834)
Q Consensus 350 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l 405 (834)
...+. ++. ....+.. ....+.+++.+||+.+|++||+|.+|++.|
T Consensus 211 ~~~~~-~~~--~~~~~~~--------~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 211 VETIN-AGF--RLYKPRL--------ASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred HHHHh-CCC--CCCCCCC--------CCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 11111 111 1111111 125688999999999999999999999876
No 463
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=3.3e-35 Score=312.49 Aligned_cols=255 Identities=22% Similarity=0.333 Sum_probs=195.9
Q ss_pred cCcCCcccccCCcEEEEEEECCCcEEEEEEecCCCC-----hhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEE
Q 003278 515 FSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKC-----PALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIY 589 (834)
Q Consensus 515 f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~-----~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~ 589 (834)
|...+.||.|+||.||+|...++..+|||.+..... ......+.+|++++++++||||++++++|.+.+..+++|
T Consensus 2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 81 (265)
T cd06631 2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFM 81 (265)
T ss_pred ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEE
Confidence 455678999999999999988889999998864422 122356889999999999999999999999999999999
Q ss_pred eccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccc
Q 003278 590 DYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFL 669 (834)
Q Consensus 590 Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~ 669 (834)
||+++++|.+++...+ .+++.....++.|++.||+|||+ .+|+|+||||+||++++++.+||+|||++...
T Consensus 82 e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 152 (265)
T cd06631 82 EFVPGGSISSILNRFG------PLPEPVFCKYTKQILDGVAYLHN---NCVVHRDIKGNNVMLMPNGIIKLIDFGCARRL 152 (265)
T ss_pred ecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHhEEECCCCeEEeccchhhHhh
Confidence 9999999999986532 36788888999999999999996 68999999999999999999999999998764
Q ss_pred ccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCcc
Q 003278 670 TRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPL 749 (834)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 749 (834)
...... ...........||..|+|||++.+..++.++|||||||++|||+||+.|+......... ..........
T Consensus 153 ~~~~~~-~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~----~~~~~~~~~~ 227 (265)
T cd06631 153 AWVGLH-GTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAM----FYIGAHRGLM 227 (265)
T ss_pred hhcccc-ccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHH----HHhhhccCCC
Confidence 321110 01111123457899999999999888999999999999999999999998643221111 1111110111
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 750 AELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 750 ~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
+.+...+. . .+..++.+||+.+|++|||+.+|++
T Consensus 228 -----~~~~~~~~-~---~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 228 -----PRLPDSFS-A---AAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred -----CCCCCCCC-H---HHHHHHHHHhcCCcccCCCHHHHhc
Confidence 11112222 2 3455666899999999999999874
No 464
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=4.4e-35 Score=309.70 Aligned_cols=251 Identities=24% Similarity=0.381 Sum_probs=199.9
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc--ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEc
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK--GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDY 189 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 189 (834)
+|+..+.||+|+||.||++....+|+.||+|.+... .....+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 377789999999999999999889999999998643 234456789999999999999999999999999999999999
Q ss_pred cCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhh
Q 003278 190 MPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLE 269 (834)
Q Consensus 190 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~ 269 (834)
+++++|.+++.... ...+++.++..++.|++.||.|||+. +++|+||+|+|||++.++.++|+|||++....
T Consensus 81 ~~~~~l~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~ 152 (256)
T cd08218 81 CEGGDLYKKINAQR-----GVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLN 152 (256)
T ss_pred CCCCcHHHHHHhcc-----CCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecC
Confidence 99999999886432 23578999999999999999999985 99999999999999999999999999987543
Q ss_pred hhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHH
Q 003278 270 HELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDW 349 (834)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~ 349 (834)
..... .....|++.|+|||++..+ ..+.++|||||||+++||+||+.|+.... ..+.
T Consensus 153 ~~~~~----------------~~~~~~~~~~~~pe~~~~~-~~~~~~Dv~slG~i~~~l~~g~~~~~~~~------~~~~ 209 (256)
T cd08218 153 STVEL----------------ARTCIGTPYYLSPEICENR-PYNNKSDIWALGCVLYEMCTLKHAFEAGN------MKNL 209 (256)
T ss_pred cchhh----------------hhhccCCccccCHHHhCCC-CCCCccchhHHHHHHHHHHcCCCCccCCC------HHHH
Confidence 22110 1223588999999988654 57889999999999999999999986421 1112
Q ss_pred HHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 350 IRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 350 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
+..... +... ... ... ...+.+++..||+.+|.+||+|.+|++.
T Consensus 210 ~~~~~~-~~~~-----~~~-~~~----~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 210 VLKIIR-GSYP-----PVS-SHY----SYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred HHHHhc-CCCC-----CCc-ccC----CHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 222111 1111 010 111 2357889999999999999999999873
No 465
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=8.1e-36 Score=332.21 Aligned_cols=210 Identities=18% Similarity=0.213 Sum_probs=173.5
Q ss_pred hCcCcCCcccccCCcEEEEEEEC-CCcEEEEEEecCCC--ChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSK--CPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIY 589 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~ 589 (834)
++|...+.||+|+||.||++... ++..||||.+.... .......+.+|+.++.+++||||+++++++.+.+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 35777889999999999999864 58899999986421 2233467888999999999999999999999999999999
Q ss_pred eccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccc
Q 003278 590 DYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFL 669 (834)
Q Consensus 590 Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~ 669 (834)
||+++|+|.+++.... .+++.....++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.+
T Consensus 81 E~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~~L~~lH~---~givHrDLkp~NIli~~~~~vkL~DfG~~~~~ 151 (360)
T cd05627 81 EFLPGGDMMTLLMKKD------TLSEEATQFYIAETVLAIDAIHQ---LGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGL 151 (360)
T ss_pred eCCCCccHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEeeccCCccc
Confidence 9999999999986532 37788888999999999999996 69999999999999999999999999998754
Q ss_pred ccCCCCCc----------------------------ccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh
Q 003278 670 TRNDHGHR----------------------------KATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT 721 (834)
Q Consensus 670 ~~~~~~~~----------------------------~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t 721 (834)
........ .......+.+||+.|||||++.+..++.++|||||||++|||+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~t 231 (360)
T cd05627 152 KKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLI 231 (360)
T ss_pred ccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeeccc
Confidence 32110000 00000124579999999999999999999999999999999999
Q ss_pred CCCccCCCCC
Q 003278 722 GQMAVDFRLP 731 (834)
Q Consensus 722 G~~p~~~~~~ 731 (834)
|+.||....+
T Consensus 232 G~~Pf~~~~~ 241 (360)
T cd05627 232 GYPPFCSETP 241 (360)
T ss_pred CCCCCCCCCH
Confidence 9999975544
No 466
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.1e-35 Score=332.53 Aligned_cols=263 Identities=25% Similarity=0.256 Sum_probs=193.3
Q ss_pred cCCCCCCCeeeccCCeEEEEEEEC--CCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEE
Q 003278 110 SNGFDEDEVLGSGGFGKVYRAVLP--SDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVY 187 (834)
Q Consensus 110 t~~f~~~~~LG~G~fG~Vy~~~~~--~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 187 (834)
...|...+.||+|+||.||+|... .++..||||.+... +.+.+|+.+|++++|||||++++++...+..++||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 356999999999999999999764 34678999987643 23567999999999999999999999999999999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhh
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARW 267 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 267 (834)
||+. ++|..++.. ...++|..++.|+.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 166 e~~~-~~l~~~l~~-------~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~ 234 (392)
T PHA03207 166 PKYK-CDLFTYVDR-------SGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACK 234 (392)
T ss_pred hhcC-CCHHHHHHh-------cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCccccc
Confidence 9986 688888732 24689999999999999999999985 999999999999999999999999999975
Q ss_pred hhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccch-H
Q 003278 268 LEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII-L 346 (834)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~-l 346 (834)
+..... ........||+.|+|||++... .++.++|||||||++|||++|+.||.......... +
T Consensus 235 ~~~~~~--------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l 299 (392)
T PHA03207 235 LDAHPD--------------TPQCYGWSGTLETNSPELLALD-PYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQL 299 (392)
T ss_pred cCcccc--------------cccccccccccCccCHhHhcCC-CCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHH
Confidence 432110 0112345699999999988654 67899999999999999999999986433221111 1
Q ss_pred HHHHHHHhhcCc-----------------cccccccccCCCCC--CHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 347 LDWIRRLSDEGK-----------------VLQAGDNRLSDGSY--KLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 347 ~~~~~~~~~~~~-----------------~~~~~d~~l~~~~~--~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
...+. ...... ......+....... .......+..+...|+..||++||++.+++..
T Consensus 300 ~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 300 RSIIR-CMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred HHHHH-HhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 11111 000000 00000000000000 00001245678889999999999999999864
No 467
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=2.6e-35 Score=311.23 Aligned_cols=249 Identities=21% Similarity=0.327 Sum_probs=197.0
Q ss_pred hCcCcCCcccccCCcEEEEEEECC-CcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEec
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLDN-HQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY 591 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey 591 (834)
++|...+.||+|+||.||+|...+ +..+++|.+..... .+.|.+|++++++++||||++++|++.+....++++||
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~ 79 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED---LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY 79 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH---HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence 567778889999999999999765 78899999864322 56899999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccccc
Q 003278 592 SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTR 671 (834)
Q Consensus 592 ~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~ 671 (834)
+++++|.+++.... ..++|.....++.|++.||.|||+ .+|+||||+|+||++++++.+||+|||++.....
T Consensus 80 ~~~~~L~~~l~~~~-----~~l~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~ 151 (256)
T cd06612 80 CGAGSVSDIMKITN-----KTLTEEEIAAILYQTLKGLEYLHS---NKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTD 151 (256)
T ss_pred CCCCcHHHHHHhCc-----cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEECCCCcEEEcccccchhccc
Confidence 99999999986433 248899999999999999999996 5899999999999999999999999999976543
Q ss_pred CCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCcccc
Q 003278 672 NDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAE 751 (834)
Q Consensus 672 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (834)
... ......|+..|+|||++.+..++.++|||||||++|||+||+.|+....+...... . .....
T Consensus 152 ~~~-------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~----~--~~~~~-- 216 (256)
T cd06612 152 TMA-------KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFM----I--PNKPP-- 216 (256)
T ss_pred Ccc-------ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhh----h--ccCCC--
Confidence 210 11234588999999999988999999999999999999999999864333211100 0 00000
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 752 LVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 752 ~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
+.+. .....-..+.+++.+||+.||++|||+.+|++
T Consensus 217 ---~~~~--~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 217 ---PTLS--DPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred ---CCCC--chhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 0000 00011123555666999999999999999975
No 468
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.4e-35 Score=324.86 Aligned_cols=238 Identities=20% Similarity=0.216 Sum_probs=181.2
Q ss_pred CcccccCCcEEEEEEE-CCCcEEEEEEecCCC--ChhHHHHHHHHH-HHHHhccCCCceeEEEEEeeCCeEEEEEeccCC
Q 003278 519 QRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSK--CPALRTRFSNEL-QNLARLRHRNLVQLCGWCTEQGEMLVIYDYSAT 594 (834)
Q Consensus 519 ~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~f~~E~-~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~~ 594 (834)
+.||+|+||.||+|.. .++..||+|.+.... .......+..|. .+++.++|||||++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 3589999999999996 457899999986432 112234455555 467889999999999999999999999999999
Q ss_pred CchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCCC
Q 003278 595 RILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRNDH 674 (834)
Q Consensus 595 g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~~ 674 (834)
|+|..++.... .++......++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~~L~~~l~~~~------~~~~~~~~~~~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~- 150 (321)
T cd05603 81 GELFFHLQRER------CFLEPRARFYAAEVASAIGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE- 150 (321)
T ss_pred CCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC-
Confidence 99988875432 36677777899999999999996 699999999999999999999999999987432111
Q ss_pred CCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCccccccc
Q 003278 675 GHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAELVD 754 (834)
Q Consensus 675 ~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 754 (834)
.......||+.|+|||++.+..++.++|||||||++|||+||+.||...... .+...+ . ..+.
T Consensus 151 ------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i---~--~~~~----- 213 (321)
T cd05603 151 ------ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVS-QMYDNI---L--HKPL----- 213 (321)
T ss_pred ------CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHH-HHHHHH---h--cCCC-----
Confidence 1123457999999999999889999999999999999999999998643221 111111 1 1110
Q ss_pred cccCCCCCHHHHHHHHHHHHHhccCCCCCCCChh
Q 003278 755 LSLNGEYNHKELMRLIKLGIACTLSNPELRPSMR 788 (834)
Q Consensus 755 ~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~ 788 (834)
.+..... ..+..+..+|++.||.+||+..
T Consensus 214 -~~~~~~~----~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 214 -QLPGGKT----VAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred -CCCCCCC----HHHHHHHHHHccCCHhhcCCCC
Confidence 1111111 2345566689999999999864
No 469
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=1.4e-35 Score=316.27 Aligned_cols=258 Identities=26% Similarity=0.386 Sum_probs=200.2
Q ss_pred hhcCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhC-CCCceeeEeeeEEeCC-----
Q 003278 108 IGSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHL-RHRNLVRLRGWCVHED----- 181 (834)
Q Consensus 108 ~~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~----- 181 (834)
.++++|+..+.||+|+||.||+|....++..+|+|.+..... ..+.|.+|+.+++++ +|+||++++++|....
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 457889999999999999999999988899999999865433 346789999999999 7999999999997654
Q ss_pred -EEEEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEe
Q 003278 182 -QLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLG 260 (834)
Q Consensus 182 -~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~ 260 (834)
.+++||||+++++|.+++..... ....+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.+||+
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~ 155 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRK---KGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLV 155 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEEC
Confidence 48999999999999998864321 135689999999999999999999985 99999999999999999999999
Q ss_pred eccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCcccccc----CCCCCcccceeehhhHHHHHHhCCccCC
Q 003278 261 DFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQK----GSVATAKSDVFSFGIVVLEVVSGRRAVD 336 (834)
Q Consensus 261 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~----~~~~~~ksDV~SfGvvl~ElltG~~p~~ 336 (834)
|||++........ ......||+.|+|||.+.. ...++.++|||||||+++||+||+.||.
T Consensus 156 d~~~~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~ 219 (275)
T cd06608 156 DFGVSAQLDSTLG----------------RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLC 219 (275)
T ss_pred CCccceecccchh----------------hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCcc
Confidence 9999875422110 1123458999999998743 2346788999999999999999999986
Q ss_pred CCCCCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHH
Q 003278 337 LTYPDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIE 403 (834)
Q Consensus 337 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~ 403 (834)
..... ..+. ... .+ ..+.+.. ...-...+.+++..||..||.+||++.++++
T Consensus 220 ~~~~~--~~~~----~~~-~~-----~~~~~~~---~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 220 DMHPM--RALF----KIP-RN-----PPPTLKS---PENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred ccchH--HHHH----Hhh-cc-----CCCCCCc---hhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 32111 1111 111 01 1111110 1111246788999999999999999999986
No 470
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=2.5e-35 Score=312.73 Aligned_cols=253 Identities=27% Similarity=0.385 Sum_probs=195.4
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEcc
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYM 190 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 190 (834)
++|...+.||+|+||.||+|.+. .+..||+|.+.... ...+.|.+|+.++++++||||+++++++. .+..++||||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWN-GTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFM 82 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEc-CCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcC
Confidence 45778889999999999999985 44569999876432 34567899999999999999999999875 55689999999
Q ss_pred CCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhh
Q 003278 191 PNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEH 270 (834)
Q Consensus 191 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~ 270 (834)
++|+|.+++.... ...++|..+..++.|++.||.|||+. +|+||||||+||++++++.++|+|||+++.+..
T Consensus 83 ~~~~L~~~~~~~~-----~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~ 154 (260)
T cd05069 83 GKGSLLDFLKEGD-----GKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIED 154 (260)
T ss_pred CCCCHHHHHhhCC-----CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccC
Confidence 9999999996532 23589999999999999999999985 899999999999999999999999999975422
Q ss_pred hhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCccchHHHH
Q 003278 271 ELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQIILLDW 349 (834)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~~l~~~ 349 (834)
... .......++..|+|||+...+ .++.++|||||||++|||+| |+.|+..... .....+
T Consensus 155 ~~~---------------~~~~~~~~~~~y~~Pe~~~~~-~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---~~~~~~ 215 (260)
T cd05069 155 NEY---------------TARQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELVTKGRVPYPGMVN---REVLEQ 215 (260)
T ss_pred Ccc---------------cccCCCccchhhCCHHHhccC-CcChHHHHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHH
Confidence 100 001122367889999988654 57899999999999999999 8888754221 111122
Q ss_pred HHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhc
Q 003278 350 IRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSG 407 (834)
Q Consensus 350 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~ 407 (834)
+. .... .... ......+.+++.+||+.+|.+||++.+|++.|+.
T Consensus 216 ~~---~~~~------~~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 216 VE---RGYR------MPCP-----QGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred HH---cCCC------CCCC-----cccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 11 1100 0000 0112467889999999999999999999998864
No 471
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=4.6e-35 Score=309.65 Aligned_cols=255 Identities=29% Similarity=0.443 Sum_probs=199.5
Q ss_pred CeeeccCCeEEEEEEECCC---CeEEEEEEecccChh-hHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEccCC
Q 003278 117 EVLGSGGFGKVYRAVLPSD---GTVVAVKCLAEKGER-FEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPN 192 (834)
Q Consensus 117 ~~LG~G~fG~Vy~~~~~~~---g~~vAvK~l~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 192 (834)
+.||+|+||.||+|..... +..||||.+...... ..+.+.+|+..+..++|+||+++++++...+..++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 4799999999999999765 889999998765333 367889999999999999999999999999999999999999
Q ss_pred CCHhHHHhcCCCc--cccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhh
Q 003278 193 RSLDRVLFRRPEN--LEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEH 270 (834)
Q Consensus 193 gsL~~~l~~~~~~--~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~ 270 (834)
++|.+++...... ......+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||.++....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccccccccccc
Confidence 9999998754210 00125689999999999999999999985 999999999999999999999999999986533
Q ss_pred hhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCccchHHHH
Q 003278 271 ELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQIILLDW 349 (834)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~~l~~~ 349 (834)
... ........+++.|+|||.+... .++.++|||||||++|||++ |+.|+..... ..+
T Consensus 158 ~~~--------------~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---~~~--- 216 (262)
T cd00192 158 DDY--------------YRKKTGGKLPIRWMAPESLKDG-IFTSKSDVWSFGVLLWEIFTLGATPYPGLSN---EEV--- 216 (262)
T ss_pred ccc--------------cccccCCCcCccccCHHHhccC-CcchhhccHHHHHHHHHHHhcCCCCCCCCCH---HHH---
Confidence 210 0112334578999999988665 67899999999999999999 5888865421 111
Q ss_pred HHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhh
Q 003278 350 IRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVS 406 (834)
Q Consensus 350 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~ 406 (834)
...+.. +.... .. ... ...+.+++..||+.+|.+||++.++++.|+
T Consensus 217 ~~~~~~-~~~~~-----~~-~~~----~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 217 LEYLRK-GYRLP-----KP-EYC----PDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred HHHHHc-CCCCC-----CC-ccC----ChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 111111 11111 00 011 246889999999999999999999998763
No 472
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=1.6e-35 Score=319.56 Aligned_cols=265 Identities=23% Similarity=0.303 Sum_probs=195.9
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC-hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEc
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG-ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDY 189 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 189 (834)
++|+..+.||+|+||.||+|..+.+++.||||.+.... ......+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 57888899999999999999998899999999986432 22234577899999999999999999999999999999999
Q ss_pred cCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhh
Q 003278 190 MPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLE 269 (834)
Q Consensus 190 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~ 269 (834)
+++ +|.+++.... ..+++.....++.|+++||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 85 ~~~-~L~~~~~~~~------~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 154 (291)
T cd07844 85 LDT-DLKQYMDDCG------GGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKS 154 (291)
T ss_pred CCC-CHHHHHHhCC------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccC
Confidence 985 9998886532 3578999999999999999999985 99999999999999999999999999986431
Q ss_pred hhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHH
Q 003278 270 HELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDW 349 (834)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~ 349 (834)
... ...+...++..|+|||.+.....++.++|||||||++|||++|+.||.......+ ...-
T Consensus 155 ~~~----------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~--~~~~ 216 (291)
T cd07844 155 VPS----------------KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVED--QLHK 216 (291)
T ss_pred CCC----------------ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHH--HHHH
Confidence 100 0012234688999999886555578899999999999999999999864321111 0000
Q ss_pred HHHHhhc---Cccccc-------------c-ccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHH
Q 003278 350 IRRLSDE---GKVLQA-------------G-DNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIE 403 (834)
Q Consensus 350 ~~~~~~~---~~~~~~-------------~-d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~ 403 (834)
+...... ...... . ...+............+.+++..|++.+|++||++.+++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 217 IFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred HHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 0000000 000000 0 0000000001111245678999999999999999999875
No 473
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=5.6e-35 Score=309.92 Aligned_cols=254 Identities=26% Similarity=0.429 Sum_probs=204.9
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccCh-hhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEc
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGE-RFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDY 189 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 189 (834)
++|+..+.||+|+||.||+|....++..||||++..... ...+.+.+|+..+.+++|+||+++++++...+..++||||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 468888999999999999999988899999999876543 4567899999999999999999999999999999999999
Q ss_pred cCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHh-ccCCCeecCCCCCCceEECCCCceEEeeccchhhh
Q 003278 190 MPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHE-QLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWL 268 (834)
Q Consensus 190 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 268 (834)
+++++|.+++... .++++..+..++.|+++||+|||+ . +++||||+|+||+++.++.++|+|||++..+
T Consensus 81 ~~~~~L~~~l~~~-------~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~ 150 (264)
T cd06623 81 MDGGSLADLLKKV-------GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVL 150 (264)
T ss_pred cCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceec
Confidence 9999999998643 468899999999999999999998 5 9999999999999999999999999998754
Q ss_pred hhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHH
Q 003278 269 EHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLD 348 (834)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~ 348 (834)
.... .......|+..|+|||.+... .++.++||||||+++|||+||+.|+..........+..
T Consensus 151 ~~~~----------------~~~~~~~~~~~y~~pE~~~~~-~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~ 213 (264)
T cd06623 151 ENTL----------------DQCNTFVGTVTYMSPERIQGE-SYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQ 213 (264)
T ss_pred ccCC----------------CcccceeecccccCHhhhCCC-CCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHH
Confidence 3211 011244688999999988655 67889999999999999999999986543212222222
Q ss_pred HHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 349 WIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 349 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
++. . ... +.+.... ....+.+++..|+..+|++||++.++++.
T Consensus 214 ~~~---~-~~~-----~~~~~~~----~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 214 AIC---D-GPP-----PSLPAEE----FSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred HHh---c-CCC-----CCCCccc----CCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 221 1 111 1111000 12468889999999999999999999874
No 474
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=4.4e-35 Score=309.69 Aligned_cols=251 Identities=25% Similarity=0.385 Sum_probs=201.3
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc--ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEc
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK--GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDY 189 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 189 (834)
+|+..+.||+|+||.||.+....++..+++|.+... .....+.+.+|+.++++++|+||+++++++.+.+.+++||||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 477889999999999999999889999999987643 344556788999999999999999999999999999999999
Q ss_pred cCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhh
Q 003278 190 MPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLE 269 (834)
Q Consensus 190 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~ 269 (834)
+++|+|.+++.... ...+++.++..++.|++.||.|||+. +++||||||+||+++.++.+||+|||+++...
T Consensus 81 ~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~ 152 (256)
T cd08221 81 ANGGTLYDKIVRQK-----GQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILG 152 (256)
T ss_pred cCCCcHHHHHHhcc-----ccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEcc
Confidence 99999999986542 24689999999999999999999985 89999999999999999999999999987543
Q ss_pred hhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHH
Q 003278 270 HELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDW 349 (834)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~ 349 (834)
.... ......||+.|+|||.+... ..+.++|||||||+++||++|+.|++..... ..
T Consensus 153 ~~~~----------------~~~~~~~~~~y~ape~~~~~-~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~------~~ 209 (256)
T cd08221 153 SEYS----------------MAETVVGTPYYMSPELCQGV-KYNFKSDIWALGCVLYELLTLKRTFDATNPL------NL 209 (256)
T ss_pred cccc----------------cccccCCCccccCHhhcCCC-CCCCcchhHHHHHHHHHHHHCCCCCCCCCHH------HH
Confidence 2110 12234589999999988644 5688999999999999999999998643211 11
Q ss_pred HHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 350 IRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 350 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
..... .+...... ... ...+.+++..||+.+|.+||++.++++.
T Consensus 210 ~~~~~-~~~~~~~~------~~~----~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 210 VVKIV-QGNYTPVV------SVY----SSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred HHHHH-cCCCCCCc------ccc----CHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 21211 12211110 111 2357789999999999999999999875
No 475
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.1e-35 Score=330.62 Aligned_cols=199 Identities=18% Similarity=0.223 Sum_probs=164.8
Q ss_pred HhhCcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCC-ChhHHHHHHHHHHHHHhccCCCceeEEEEEeeC------
Q 003278 511 ATNNFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSK-CPALRTRFSNELQNLARLRHRNLVQLCGWCTEQ------ 582 (834)
Q Consensus 511 at~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~------ 582 (834)
..++|...+.||+|+||.||++.. ..+..||||.+.... .......+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 346788889999999999999985 457889999987532 233456788999999999999999999987543
Q ss_pred CeEEEEEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEee
Q 003278 583 GEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGS 662 (834)
Q Consensus 583 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~D 662 (834)
...++||||+.++ |.+.+.. .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 95 ~~~~lv~e~~~~~-l~~~~~~--------~l~~~~~~~~~~qi~~aL~~LH~---~givHrDikp~Nill~~~~~~kl~D 162 (355)
T cd07874 95 QDVYLVMELMDAN-LCQVIQM--------ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILD 162 (355)
T ss_pred ceeEEEhhhhccc-HHHHHhh--------cCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEECCCCCEEEee
Confidence 3579999999764 5454431 26788888999999999999996 6999999999999999999999999
Q ss_pred eeeccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCC
Q 003278 663 FALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFR 729 (834)
Q Consensus 663 fGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~ 729 (834)
||+++..... .......||..|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 163 fg~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 221 (355)
T cd07874 163 FGLARTAGTS--------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221 (355)
T ss_pred CcccccCCCc--------cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9999754221 1122457899999999999889999999999999999999999998643
No 476
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=2.5e-35 Score=312.58 Aligned_cols=254 Identities=22% Similarity=0.384 Sum_probs=199.5
Q ss_pred hCcCcCCcccccCCcEEEEEEECCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEecc
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYS 592 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~ 592 (834)
++|...+.||+|+||.||+|..+++..||||.+..... ..+.|.+|+.++++++||||+++++++......++||||+
T Consensus 6 ~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 83 (261)
T cd05034 6 ESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM--SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM 83 (261)
T ss_pred hheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc--CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence 46777788999999999999988888899999875432 2367899999999999999999999999888999999999
Q ss_pred CCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccC
Q 003278 593 ATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRN 672 (834)
Q Consensus 593 ~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~ 672 (834)
++++|.+++.... ...+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+|++|||++..+...
T Consensus 84 ~~~~L~~~i~~~~----~~~~~~~~~~~~~~~i~~al~~lh~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~ 156 (261)
T cd05034 84 SKGSLLDFLKSGE----GKKLRLPQLVDMAAQIAEGMAYLES---RNYIHRDLAARNILVGENLVCKIADFGLARLIEDD 156 (261)
T ss_pred CCCCHHHHHhccc----cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcchheEEEcCCCCEEECccccceeccch
Confidence 9999999986532 1248899999999999999999996 68999999999999999999999999998765321
Q ss_pred CCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcCcccc
Q 003278 673 DHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRPLAE 751 (834)
Q Consensus 673 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (834)
.. .......++..|+|||.+.+..++.++|||||||++|||+| |+.|+....... ....... . ...
T Consensus 157 ~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~-~~~~~~~---~---~~~ 223 (261)
T cd05034 157 EY------TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNRE-VLEQVER---G---YRM 223 (261)
T ss_pred hh------hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHc---C---CCC
Confidence 10 01112235678999999998889999999999999999999 888885433221 1111111 0 000
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHcc
Q 003278 752 LVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDG 796 (834)
Q Consensus 752 ~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~ 796 (834)
...... +. .+.+++.+||..+|++||++.++.+.|+.
T Consensus 224 ----~~~~~~-~~---~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 224 ----PRPPNC-PE---ELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred ----CCCCCC-CH---HHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 000111 22 45566779999999999999999999875
No 477
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=3.4e-35 Score=313.14 Aligned_cols=256 Identities=27% Similarity=0.399 Sum_probs=198.3
Q ss_pred CCCCCCeeeccCCeEEEEEEECC-CCeEEEEEEeccc----------ChhhHHHHHHHHHHHHh-CCCCceeeEeeeEEe
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPS-DGTVVAVKCLAEK----------GERFEKTFAAELVAVAH-LRHRNLVRLRGWCVH 179 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~-~g~~vAvK~l~~~----------~~~~~~~~~~E~~~l~~-l~H~nIv~l~g~~~~ 179 (834)
+|+..+.||+|+||.||+|.+.. .+..+|||.+... .......+.+|+.++.+ ++||||++++++|..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47788899999999999999976 5789999987532 12234567788888875 799999999999999
Q ss_pred CCEEEEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEE
Q 003278 180 EDQLLLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARL 259 (834)
Q Consensus 180 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl 259 (834)
.+..++||||+++++|.+++..... ....+++..++.++.|++.||.|||+. .+++|+||||+|||++.++.+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lh~~--~~i~H~dl~~~nil~~~~~~~~l 155 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKE---KKQRFTEERIWNIFVQMVLALRYLHKE--KRIVHRDLTPNNIMLGEDDKVTI 155 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHhccC--CceeecCCCHHHEEECCCCcEEE
Confidence 9999999999999999988854211 134689999999999999999999963 38999999999999999999999
Q ss_pred eeccchhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCC
Q 003278 260 GDFGLARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTY 339 (834)
Q Consensus 260 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~ 339 (834)
+|||++....... ..+...|+..|+|||.+..+ .++.++|||||||++|||++|+.|+....
T Consensus 156 ~dfg~~~~~~~~~-----------------~~~~~~~~~~~~~Pe~~~~~-~~~~~~Dv~slG~ll~~l~~g~~p~~~~~ 217 (269)
T cd08528 156 TDFGLAKQKQPES-----------------KLTSVVGTILYSCPEIVKNE-PYGEKADVWAFGCILYQMCTLQPPFYSTN 217 (269)
T ss_pred ecccceeeccccc-----------------ccccccCcccCcChhhhcCC-CCchHHHHHHHHHHHHHHHhCCCcccccC
Confidence 9999987532210 12344589999999998754 57899999999999999999999985321
Q ss_pred CCccchHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhh
Q 003278 340 PDDQIILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVS 406 (834)
Q Consensus 340 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~ 406 (834)
......... ++...... ...+ ...+.+++.+||+.||++||+|.+|.+++.
T Consensus 218 ------~~~~~~~~~-~~~~~~~~-----~~~~----~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 218 ------MLSLATKIV-EAVYEPLP-----EGMY----SEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred ------HHHHHHHHh-hccCCcCC-----cccC----CHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 111111111 11111110 0111 245788999999999999999999998874
No 478
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=2e-35 Score=312.28 Aligned_cols=251 Identities=23% Similarity=0.386 Sum_probs=195.9
Q ss_pred CcCcCCcccccCCcEEEEEEECCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEeccC
Q 003278 514 NFSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYSA 593 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~~ 593 (834)
+|...+.||+|+||.||+|...++..+|+|.+..... ....|.+|++++++++||||+++++++......++||||++
T Consensus 5 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 5 ELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM--SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred HeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC--CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 4555678999999999999987778899998864332 23568999999999999999999999999999999999999
Q ss_pred CCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccCC
Q 003278 594 TRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRND 673 (834)
Q Consensus 594 ~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~~ 673 (834)
+++|.+++.... ..++|..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++.......
T Consensus 83 ~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 154 (256)
T cd05112 83 HGCLSDYLRAQR-----GKFSQETLLGMCLDVCEGMAYLES---SNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ 154 (256)
T ss_pred CCcHHHHHHhCc-----cCCCHHHHHHHHHHHHHHHHHHHH---CCccccccccceEEEcCCCeEEECCCcceeecccCc
Confidence 999999886532 237888899999999999999996 689999999999999999999999999987543211
Q ss_pred CCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcCccccc
Q 003278 674 HGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRPLAEL 752 (834)
Q Consensus 674 ~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (834)
. .......++.+|+|||++.++.++.++|||||||++|||++ |..|+....... ..... ....+ .
T Consensus 155 ~------~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~-~~~~~---~~~~~----~ 220 (256)
T cd05112 155 Y------TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE-VVETI---NAGFR----L 220 (256)
T ss_pred c------cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH-HHHHH---hCCCC----C
Confidence 0 00112235678999999998899999999999999999998 888886433221 11111 11001 1
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHc
Q 003278 753 VDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795 (834)
Q Consensus 753 ~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~ 795 (834)
.++.. .. ..+.+++.+||+.+|++||||.+|++.|.
T Consensus 221 ~~~~~----~~---~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 221 YKPRL----AS---QSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred CCCCC----CC---HHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 11111 11 34667788999999999999999999873
No 479
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=5.6e-35 Score=317.77 Aligned_cols=270 Identities=18% Similarity=0.210 Sum_probs=201.4
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC---hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVY 187 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 187 (834)
++|+..+.||+|+||.||++....+++.||+|.+.... ....+.+.+|+.+++.++||||+++++++..++..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 47888999999999999999999899999999986542 223457889999999999999999999999999999999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhh
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARW 267 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 267 (834)
||+++|+|.+++... ..+++.....++.|++.||.|||+. +++||||||+|||++.++.+||+|||+++.
T Consensus 81 e~~~g~~L~~~l~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~ 150 (305)
T cd05609 81 EYVEGGDCATLLKNI-------GALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKI 150 (305)
T ss_pred ecCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccc
Confidence 999999999998542 3588999999999999999999985 999999999999999999999999999874
Q ss_pred hhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHH
Q 003278 268 LEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILL 347 (834)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~ 347 (834)
.............. .............|+..|+|||++... .++.++|||||||++|||+||+.||..... .
T Consensus 151 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~pf~~~~~------~ 222 (305)
T cd05609 151 GLMSLTTNLYEGHI-EKDTREFLDKQVCGTPEYIAPEVILRQ-GYGKPVDWWAMGIILYEFLVGCVPFFGDTP------E 222 (305)
T ss_pred cCcCcccccccccc-ccchhhccccCCccCccccCchhccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH------H
Confidence 21110000000000 000000012234689999999998654 578999999999999999999999853211 1
Q ss_pred HHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhc
Q 003278 348 DWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSG 407 (834)
Q Consensus 348 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~ 407 (834)
.+...... +.. ..+... .. ....+..++..||+.+|++||++.++.+.|..
T Consensus 223 ~~~~~~~~-~~~---~~~~~~-~~----~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 223 ELFGQVIS-DDI---EWPEGD-EA----LPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred HHHHHHHh-ccc---CCCCcc-cc----CCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 11111111 110 111110 11 12357899999999999999998777776654
No 480
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=3e-35 Score=312.13 Aligned_cols=253 Identities=21% Similarity=0.352 Sum_probs=197.0
Q ss_pred hCcCcCCcccccCCcEEEEEEECCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEecc
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLDNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYS 592 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~ 592 (834)
+.|...++||+|+||.||++...++..+|+|.+... ....+.|.+|++++++++|+||+++++++.+ ...+++|||+
T Consensus 6 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~ 82 (260)
T cd05073 6 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG--SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFM 82 (260)
T ss_pred cceeEEeEecCccceEEEEEEecCCccEEEEecCCC--hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeC
Confidence 356667889999999999999888888999987643 2234679999999999999999999999887 7789999999
Q ss_pred CCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccC
Q 003278 593 ATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRN 672 (834)
Q Consensus 593 ~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~ 672 (834)
++|+|.+++.... ...++|..++.++.|++.||+|||+ .+++||||||+||+++.++.+|++|||++..+...
T Consensus 83 ~~~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 155 (260)
T cd05073 83 AKGSLLDFLKSDE----GSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDN 155 (260)
T ss_pred CCCcHHHHHHhCC----ccccCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCCcceeeccCC
Confidence 9999999986532 1247888999999999999999996 68999999999999999999999999999765332
Q ss_pred CCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHHhhcCcccc
Q 003278 673 DHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFEARKRPLAE 751 (834)
Q Consensus 673 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (834)
.. .......++..|+|||++..+.++.++|||||||++|||+| |..|+....... +..... . ....
T Consensus 156 ~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~-~~~~~~----~-~~~~- 222 (260)
T cd05073 156 EY------TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE-VIRALE----R-GYRM- 222 (260)
T ss_pred Cc------ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHH-HHHHHh----C-CCCC-
Confidence 11 01112346678999999998899999999999999999999 888876432221 111111 0 1000
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHcc
Q 003278 752 LVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDG 796 (834)
Q Consensus 752 ~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~ 796 (834)
......+ ..+..++.+||+.+|++||++.++.+.|+.
T Consensus 223 ----~~~~~~~----~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 223 ----PRPENCP----EELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred ----CCcccCC----HHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0111111 245566679999999999999999999964
No 481
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7.5e-35 Score=328.00 Aligned_cols=196 Identities=20% Similarity=0.242 Sum_probs=165.2
Q ss_pred hCcCcCCcccccCCcEEEEEEECC---CcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLDN---HQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIY 589 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~~---~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~ 589 (834)
..|.....||+|+||.||++...+ +..||||.+... ..+.+|+++|++++|||||++++++......++||
T Consensus 92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG------KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 468888999999999999997533 467999987532 23567999999999999999999999999999999
Q ss_pred eccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccc
Q 003278 590 DYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFL 669 (834)
Q Consensus 590 Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~ 669 (834)
||+. ++|..++... ..++|..++.|+.|++.||+|||+ .+||||||||+|||++.++.+||+|||++..+
T Consensus 166 e~~~-~~l~~~l~~~------~~l~~~~~~~i~~ql~~aL~~LH~---~givHrDlkp~Nill~~~~~~~l~DfG~a~~~ 235 (392)
T PHA03207 166 PKYK-CDLFTYVDRS------GPLPLEQAITIQRRLLEALAYLHG---RGIIHRDVKTENIFLDEPENAVLGDFGAACKL 235 (392)
T ss_pred hhcC-CCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEccCcccccc
Confidence 9986 5677777322 248899999999999999999996 68999999999999999999999999999765
Q ss_pred ccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCC
Q 003278 670 TRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFR 729 (834)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~ 729 (834)
..... ........||+.|+|||++....++.++|||||||++|||++|+.||...
T Consensus 236 ~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~ 290 (392)
T PHA03207 236 DAHPD-----TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGK 290 (392)
T ss_pred Ccccc-----cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 33211 11123467999999999999999999999999999999999999998643
No 482
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.2e-35 Score=325.70 Aligned_cols=243 Identities=16% Similarity=0.190 Sum_probs=188.1
Q ss_pred CcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCC--ChhHHHHHHHHHHHHHhcc-CCCceeEEEEEeeCCeEEEEE
Q 003278 514 NFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSK--CPALRTRFSNELQNLARLR-HRNLVQLCGWCTEQGEMLVIY 589 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~--~~~~~~~f~~E~~~l~~l~-HpNiv~l~g~~~~~~~~~lv~ 589 (834)
+|...+.||+|+||.||++.. .++..||+|.+.... .....+.+..|+.++..+. ||+|+++++++.+.+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 356667899999999999985 468899999986432 1223456788999998886 567888999999989999999
Q ss_pred eccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccc
Q 003278 590 DYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFL 669 (834)
Q Consensus 590 Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~ 669 (834)
||+++|+|.+++.... .+++.....++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++..
T Consensus 81 Ey~~~g~L~~~i~~~~------~l~~~~~~~i~~qi~~al~~lH~---~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~ 151 (323)
T cd05615 81 EYVNGGDLMYHIQQVG------KFKEPQAVFYAAEISVGLFFLHR---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEH 151 (323)
T ss_pred cCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEecccccccc
Confidence 9999999998886432 38899999999999999999996 69999999999999999999999999998753
Q ss_pred ccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCcc
Q 003278 670 TRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPL 749 (834)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 749 (834)
.... .......||+.|||||++.+..++.++|||||||++|||+||+.||....+.. ....+.. ...
T Consensus 152 ~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~-~~~~i~~---~~~-- 218 (323)
T cd05615 152 MVDG-------VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE-LFQSIME---HNV-- 218 (323)
T ss_pred CCCC-------ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHH-HHHHHHh---CCC--
Confidence 2211 11234579999999999999999999999999999999999999987543321 1111111 110
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChh
Q 003278 750 AELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMR 788 (834)
Q Consensus 750 ~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~ 788 (834)
..+...+ . .+..+..+||+.+|.+|++..
T Consensus 219 ------~~p~~~~-~---~~~~li~~~l~~~p~~R~~~~ 247 (323)
T cd05615 219 ------SYPKSLS-K---EAVSICKGLMTKHPSKRLGCG 247 (323)
T ss_pred ------CCCccCC-H---HHHHHHHHHcccCHhhCCCCC
Confidence 0111111 2 344566689999999999864
No 483
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.1e-35 Score=350.69 Aligned_cols=256 Identities=19% Similarity=0.281 Sum_probs=192.5
Q ss_pred hhCcCcCCcccccCCcEEEEEEEC-CCcEEEEEEecCCC-ChhHHHHHHHHHHHHHhccCCCceeEEEEEee--CCeEEE
Q 003278 512 TNNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSK-CPALRTRFSNELQNLARLRHRNLVQLCGWCTE--QGEMLV 587 (834)
Q Consensus 512 t~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~-~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~--~~~~~l 587 (834)
.++|.....||+|+||+||++... .+..||+|.+.... .......|..|+.+|++|+|||||++++++.+ ...++|
T Consensus 12 l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyI 91 (1021)
T PTZ00266 12 LNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYI 91 (1021)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEE
Confidence 356777889999999999999964 46788999886543 33345679999999999999999999998754 456899
Q ss_pred EEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccC----CceeecccccCceeecC---------
Q 003278 588 IYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWN----EQVIHRNITSSAITLDP--------- 654 (834)
Q Consensus 588 v~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~----~~iiHrDlK~~NILld~--------- 654 (834)
||||+++|+|..+|...... ...+++...+.|+.||+.||+|||+... .+||||||||+||||+.
T Consensus 92 VMEY~~gGSL~~lL~k~~~~--~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~ 169 (1021)
T PTZ00266 92 LMEFCDAGDLSRNIQKCYKM--FGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT 169 (1021)
T ss_pred EEeCCCCCcHHHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence 99999999999988653211 1248899999999999999999997421 46999999999999964
Q ss_pred --------CCCceEeeeeeccccccCCCCCcccccCccccccccCccchhcccc--CCCCccCcchhhHHHHHHHHhCCC
Q 003278 655 --------DMNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIES--GEATSMADVYSFGVVVLEVVTGQM 724 (834)
Q Consensus 655 --------~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~--~~~~~k~DV~SfGvvl~E~~tG~~ 724 (834)
...+||+|||++..+.... ......||+.|||||++.. ..++.++||||||||||||+||+.
T Consensus 170 ~~~~n~ng~~iVKLsDFGlAr~l~~~s--------~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~ 241 (1021)
T PTZ00266 170 AQANNLNGRPIAKIGDFGLSKNIGIES--------MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKT 241 (1021)
T ss_pred ccccccCCCCceEEccCCccccccccc--------cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCC
Confidence 2348999999997643211 1234579999999999854 458899999999999999999999
Q ss_pred ccCCCCCchhHHHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 725 AVDFRLPEGLLVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 725 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
||........+...+ . ..+ .+.......+ +..++..||+.+|.+|||+.+++.
T Consensus 242 PF~~~~~~~qli~~l---k--~~p-------~lpi~~~S~e---L~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 242 PFHKANNFSQLISEL---K--RGP-------DLPIKGKSKE---LNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred CCCcCCcHHHHHHHH---h--cCC-------CCCcCCCCHH---HHHHHHHHhcCChhHCcCHHHHhc
Confidence 986433222221111 1 111 0110111233 445666899999999999999983
No 484
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1.1e-35 Score=319.94 Aligned_cols=265 Identities=24% Similarity=0.334 Sum_probs=199.9
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc--ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK--GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYD 188 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 188 (834)
++|+..+.||+|+||.||+|.+..++..||||.+... .....+.+.+|+.++++++|+||+++++++...+..++|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 3688889999999999999999888999999988643 23445778999999999999999999999999999999999
Q ss_pred ccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhh
Q 003278 189 YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWL 268 (834)
Q Consensus 189 y~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 268 (834)
|++++.+..++.. ...+++..+..++.|++.||.|||+. +++||||||+||++++++.+||+|||++..+
T Consensus 81 ~~~~~~l~~~~~~-------~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~ 150 (288)
T cd07833 81 YVERTLLELLEAS-------PGGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARAL 150 (288)
T ss_pred cCCCCHHHHHHhc-------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeeccccc
Confidence 9998777765532 23478999999999999999999985 9999999999999999999999999998764
Q ss_pred hhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHH
Q 003278 269 EHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLD 348 (834)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~ 348 (834)
..... ...+...|+..|+|||++.....++.++|||||||++|||++|+.|+......+. + .
T Consensus 151 ~~~~~---------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~--~-~ 212 (288)
T cd07833 151 RARPA---------------SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQ--L-Y 212 (288)
T ss_pred CCCcc---------------ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--H-H
Confidence 32210 0123356889999999987654678999999999999999999998864321111 1 0
Q ss_pred HHHHHh------------hcCc-----cccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHH
Q 003278 349 WIRRLS------------DEGK-----VLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIE 403 (834)
Q Consensus 349 ~~~~~~------------~~~~-----~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~ 403 (834)
...... .... ..+..++......+.......+.+++..||..+|++||++.+|+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 213 LIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred HHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 010000 0000 000000000000011111356889999999999999999999875
No 485
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=2.2e-35 Score=317.21 Aligned_cols=263 Identities=24% Similarity=0.314 Sum_probs=197.1
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC--hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEc
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG--ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDY 189 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 189 (834)
+|+..+.||+|+||.||+|+...+|..||||.+.... ....+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 5888899999999999999998899999999886432 23345788999999999999999999999999999999999
Q ss_pred cCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhh
Q 003278 190 MPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLE 269 (834)
Q Consensus 190 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~ 269 (834)
++ ++|..++.... ...+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||+++.+.
T Consensus 81 ~~-~~l~~~~~~~~-----~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~ 151 (284)
T cd07860 81 LH-QDLKKFMDASP-----LSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 151 (284)
T ss_pred cc-cCHHHHHHhCC-----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcc
Confidence 96 68888886432 24689999999999999999999985 99999999999999999999999999987542
Q ss_pred hhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHH
Q 003278 270 HELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDW 349 (834)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~ 349 (834)
... ...+...+++.|+|||.+.....++.++|||||||++|||+||+.||...... ..+...
T Consensus 152 ~~~----------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~--~~~~~~ 213 (284)
T cd07860 152 VPV----------------RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--DQLFRI 213 (284)
T ss_pred cCc----------------cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH--HHHHHH
Confidence 210 00123347899999998866555688999999999999999999998643211 111111
Q ss_pred HHHHhhc---------------CccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHH
Q 003278 350 IRRLSDE---------------GKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIE 403 (834)
Q Consensus 350 ~~~~~~~---------------~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~ 403 (834)
...+... ..........+.. ... .-...+.++...|++.||.+||++.+++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 214 FRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSK-VVP-PLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HHHhCCCChhhhhhhhHHHHHHhhcccccccCHHH-Hcc-cCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 1110000 0000000000000 000 00134678999999999999999999985
No 486
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-35 Score=320.78 Aligned_cols=254 Identities=26% Similarity=0.411 Sum_probs=201.3
Q ss_pred CCCCCeeeccCCeEEEEEEECCC----CeEEEEEEeccc-ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEE
Q 003278 113 FDEDEVLGSGGFGKVYRAVLPSD----GTVVAVKCLAEK-GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVY 187 (834)
Q Consensus 113 f~~~~~LG~G~fG~Vy~~~~~~~----g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 187 (834)
....++||+|-||.||+|+.... ...||||.-+.. .....+.|+.|..+|++++|||||+|+|.|.+. ..|+||
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~Wivm 469 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWIVM 469 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ceeEEE
Confidence 34457899999999999987432 245899977653 344578899999999999999999999999864 689999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhh
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARW 267 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 267 (834)
|+++-|.|..+|..++. .|+......++.||+.||+|||+. .+|||||...|||+.+...+||+||||+|+
T Consensus 470 EL~~~GELr~yLq~nk~------sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~ 540 (974)
T KOG4257|consen 470 ELAPLGELREYLQQNKD------SLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSRY 540 (974)
T ss_pred ecccchhHHHHHHhccc------cchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhhh
Confidence 99999999999987643 477788899999999999999995 999999999999999999999999999999
Q ss_pred hhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCccchH
Q 003278 268 LEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQIIL 346 (834)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~~l 346 (834)
+..+..|.. +...=...|||||.+.-. .+|..||||=|||.+||+++ |.+||..-...+-+.
T Consensus 541 ~ed~~yYka---------------S~~kLPIKWmaPESINfR-rFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~- 603 (974)
T KOG4257|consen 541 LEDDAYYKA---------------SRGKLPIKWMAPESINFR-RFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIG- 603 (974)
T ss_pred ccccchhhc---------------cccccceeecCccccchh-cccchhhHHHHHHHHHHHHHhcCCccccccccceEE-
Confidence 887765421 122235789999998654 67999999999999999886 999997543332111
Q ss_pred HHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhcCC
Q 003278 347 LDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSGSY 409 (834)
Q Consensus 347 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~~~ 409 (834)
....|..+... ......+..|+..||..+|.+||.+.++...|+.++
T Consensus 604 ------~iEnGeRlP~P----------~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~ 650 (974)
T KOG4257|consen 604 ------HIENGERLPCP----------PNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVL 650 (974)
T ss_pred ------EecCCCCCCCC----------CCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHH
Confidence 01122222211 122357889999999999999999999988776543
No 487
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=2e-35 Score=318.91 Aligned_cols=263 Identities=19% Similarity=0.272 Sum_probs=201.4
Q ss_pred ccHHHHHHHhhCcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCCChhHHHHHHHHHHHHHhc-cCCCceeEEEEEe
Q 003278 503 ISFKEIISATNNFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSNELQNLARL-RHRNLVQLCGWCT 580 (834)
Q Consensus 503 ~~~~el~~at~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l-~HpNiv~l~g~~~ 580 (834)
+++.++..++++|...+.||+|+||.||++.. .+++.+|+|.+.... .....+.+|+.++.++ +||||+++++++.
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~--~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~ 89 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS--DVDEEIEAEYNILQSLPNHPNVVKFYGMFY 89 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc--cHHHHHHHHHHHHHHhcCCCCeEEEEEEEE
Confidence 55677778899999999999999999999986 568889999886432 2235678899999999 8999999999987
Q ss_pred eC-----CeEEEEEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCC
Q 003278 581 EQ-----GEMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPD 655 (834)
Q Consensus 581 ~~-----~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~ 655 (834)
.. +..++||||+++|+|.+++..... ....++|..+..++.|++.||+|||+ .+|+||||||+||+++++
T Consensus 90 ~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~nili~~~ 164 (291)
T cd06639 90 KADKLVGGQLWLVLELCNGGSVTELVKGLLI--CGQRLDEAMISYILYGALLGLQHLHN---NRIIHRDVKGNNILLTTE 164 (291)
T ss_pred eccccCCCeeEEEEEECCCCcHHHHHHHhhh--cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCC
Confidence 54 358999999999999998764211 12247899999999999999999996 699999999999999999
Q ss_pred CCceEeeeeeccccccCCCCCcccccCccccccccCccchhccccCC-----CCccCcchhhHHHHHHHHhCCCccCCCC
Q 003278 656 MNPRLGSFALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGE-----ATSMADVYSFGVVVLEVVTGQMAVDFRL 730 (834)
Q Consensus 656 ~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~-----~~~k~DV~SfGvvl~E~~tG~~p~~~~~ 730 (834)
+.+||+|||++..+..... ......|+..|+|||++..+. ++.++|||||||++|||+||+.|+....
T Consensus 165 ~~~kl~dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~ 237 (291)
T cd06639 165 GGVKLVDFGVSAQLTSTRL-------RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMH 237 (291)
T ss_pred CCEEEeecccchhcccccc-------cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCc
Confidence 9999999999876542211 112346889999999986443 6889999999999999999999986443
Q ss_pred CchhHHHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 731 PEGLLVKRVHEFEARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
+...+. ... ......+.++ .+....+..++.+||+.+|++||++.+|++
T Consensus 238 ~~~~~~----~~~--~~~~~~~~~~-------~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 238 PVKTLF----KIP--RNPPPTLLHP-------EKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred HHHHHH----HHh--cCCCCCCCcc-------cccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 221111 111 1111111111 111234667778999999999999999985
No 488
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=2.1e-35 Score=313.05 Aligned_cols=256 Identities=28% Similarity=0.418 Sum_probs=201.1
Q ss_pred hcCCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEE
Q 003278 109 GSNGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYD 188 (834)
Q Consensus 109 ~t~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 188 (834)
..++|...+.||+|+||.||+|.+. ++..||||.+.... ...+.+.+|+.++++++|+||+++++++...+..++|||
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTE 81 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEe
Confidence 4567999999999999999999984 56889999987542 335678999999999999999999999999899999999
Q ss_pred ccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhh
Q 003278 189 YMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWL 268 (834)
Q Consensus 189 y~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 268 (834)
|+++++|.+++.... ...+++..+..++.|++.||.|||+. +++|+||||+||++++++.+||+|||+++.+
T Consensus 82 ~~~~~~L~~~i~~~~-----~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~ 153 (261)
T cd05034 82 YMSKGSLLDFLKSGE-----GKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLI 153 (261)
T ss_pred ccCCCCHHHHHhccc-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceec
Confidence 999999999996532 24689999999999999999999985 8999999999999999999999999999765
Q ss_pred hhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHh-CCccCCCCCCCccchHH
Q 003278 269 EHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVS-GRRAVDLTYPDDQIILL 347 (834)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~~l~ 347 (834)
...... ......++..|+|||.+... .++.++|||||||+++||+| |+.|+..... ....
T Consensus 154 ~~~~~~---------------~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~slG~il~~l~t~g~~p~~~~~~---~~~~ 214 (261)
T cd05034 154 EDDEYT---------------AREGAKFPIKWTAPEAANYG-RFTIKSDVWSFGILLTEIVTYGRVPYPGMTN---REVL 214 (261)
T ss_pred cchhhh---------------hhhccCCCccccCHHHhccC-CcCchhHHHHHHHHHHHHHhCCCCCCCCCCH---HHHH
Confidence 422110 01112246789999988644 57899999999999999999 9988853211 1111
Q ss_pred HHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHHhhc
Q 003278 348 DWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEAVSG 407 (834)
Q Consensus 348 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~l~~ 407 (834)
..+ .. +. ....+ ... ...+.+++.+|++.+|++||++.++.+.|+.
T Consensus 215 ~~~---~~-~~--~~~~~----~~~----~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 215 EQV---ER-GY--RMPRP----PNC----PEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred HHH---Hc-CC--CCCCC----CCC----CHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 111 11 10 00000 011 2468899999999999999999999998764
No 489
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.1e-35 Score=319.44 Aligned_cols=264 Identities=23% Similarity=0.294 Sum_probs=195.2
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc--ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEc
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK--GERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDY 189 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 189 (834)
+|+..+.||+|+||.||+|+...+|..||+|.+... .......+.+|+.++++++||||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 367788999999999999999989999999998643 222345678899999999999999999999999999999999
Q ss_pred cCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhh
Q 003278 190 MPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLE 269 (834)
Q Consensus 190 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~ 269 (834)
++ ++|.+++... ...+++.....++.||++||.|||+. +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 81 ~~-~~l~~~~~~~------~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~ 150 (284)
T cd07839 81 CD-QDLKKYFDSC------NGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFG 150 (284)
T ss_pred CC-CCHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccC
Confidence 97 5787776542 24589999999999999999999985 99999999999999999999999999987532
Q ss_pred hhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHH
Q 003278 270 HELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDW 349 (834)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~ 349 (834)
... ...+...+|+.|+|||.+.....++.++|||||||++|||+||+.|+....... .....
T Consensus 151 ~~~----------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~--~~~~~ 212 (284)
T cd07839 151 IPV----------------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD--DQLKR 212 (284)
T ss_pred CCC----------------CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHH--HHHHH
Confidence 110 001233578999999998765567899999999999999999999864322111 11111
Q ss_pred HHHHhhcC------cccccccccc---CCCCCC-----HHHHHHHHHHHHHhcccCCCCCCchhhHHH
Q 003278 350 IRRLSDEG------KVLQAGDNRL---SDGSYK-----LCDMEHLTHLALLCTLHNPHLRPSMKWVIE 403 (834)
Q Consensus 350 ~~~~~~~~------~~~~~~d~~l---~~~~~~-----~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~ 403 (834)
+....... ...+..+... ...... ......+.+++..||+.||.+|||+.++++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 213 IFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred HHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 11100000 0000000000 000000 011245678999999999999999999876
No 490
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.8e-35 Score=327.73 Aligned_cols=198 Identities=20% Similarity=0.238 Sum_probs=164.0
Q ss_pred hhCcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCC-ChhHHHHHHHHHHHHHhccCCCceeEEEEEeeC------C
Q 003278 512 TNNFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSK-CPALRTRFSNELQNLARLRHRNLVQLCGWCTEQ------G 583 (834)
Q Consensus 512 t~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~------~ 583 (834)
.++|...+.||+|+||.||++.. .++..||||.+.... ......++.+|+.+++.++||||+++++++... .
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 99 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ 99 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence 36788888999999999999986 457899999986432 233456788999999999999999999988644 3
Q ss_pred eEEEEEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeee
Q 003278 584 EMLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSF 663 (834)
Q Consensus 584 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~Df 663 (834)
..++||||+.++ |...+.. .+++.....++.|++.||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 100 ~~~lv~e~~~~~-l~~~~~~--------~~~~~~~~~~~~qi~~~L~~LH~---~~ivHrDlkp~NIl~~~~~~~kl~Df 167 (359)
T cd07876 100 DVYLVMELMDAN-LCQVIHM--------ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDF 167 (359)
T ss_pred eeEEEEeCCCcC-HHHHHhc--------cCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEecC
Confidence 579999999865 4444421 26777788899999999999997 69999999999999999999999999
Q ss_pred eeccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCC
Q 003278 664 ALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFR 729 (834)
Q Consensus 664 Gla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~ 729 (834)
|+++..... .......||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 168 g~a~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~ 225 (359)
T cd07876 168 GLARTACTN--------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 225 (359)
T ss_pred CCccccccC--------ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 999753221 1123457899999999999999999999999999999999999998643
No 491
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=5.1e-35 Score=312.74 Aligned_cols=247 Identities=23% Similarity=0.345 Sum_probs=197.1
Q ss_pred CcCcCCcccccCCcEEEEEEEC-CCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEecc
Q 003278 514 NFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDYS 592 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey~ 592 (834)
+|...+.||.|+||.||+|... +++.||+|.+...........|.+|+++++.++||||+++++++.+....++|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence 4666678999999999999964 578999999876544444567899999999999999999999999999999999999
Q ss_pred CCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccccC
Q 003278 593 ATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTRN 672 (834)
Q Consensus 593 ~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~~ 672 (834)
++++|.+++... .+++.....++.|++.||.|||+ .+|+||||+|+||++++++.++++|||+++.+...
T Consensus 82 ~~~~L~~~~~~~-------~~~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~ 151 (274)
T cd06609 82 GGGSCLDLLKPG-------KLDETYIAFILREVLLGLEYLHE---EGKIHRDIKAANILLSEEGDVKLADFGVSGQLTST 151 (274)
T ss_pred CCCcHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEcccccceeeccc
Confidence 999999988642 47889999999999999999996 68999999999999999999999999999775432
Q ss_pred CCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCccccc
Q 003278 673 DHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAEL 752 (834)
Q Consensus 673 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (834)
. .......|+..|+|||++.+..++.++|||||||++|||+||+.|+....+.. ...... . ...
T Consensus 152 ~-------~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~-~~~~~~---~--~~~--- 215 (274)
T cd06609 152 M-------SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR-VLFLIP---K--NNP--- 215 (274)
T ss_pred c-------cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH-HHHHhh---h--cCC---
Confidence 1 11223568899999999998889999999999999999999999986433211 111111 1 110
Q ss_pred cccccCCC-CCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 753 VDLSLNGE-YNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 753 ~d~~l~~~-~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
+.+... ++ . .+..++.+||..+|++|||+++|++
T Consensus 216 --~~~~~~~~~-~---~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 216 --PSLEGNKFS-K---PFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred --CCCcccccC-H---HHHHHHHHHhhCChhhCcCHHHHhh
Confidence 111111 11 2 3445666899999999999999986
No 492
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.7e-35 Score=318.89 Aligned_cols=249 Identities=21% Similarity=0.327 Sum_probs=196.5
Q ss_pred hCcCcCCcccccCCcEEEEEEE-CCCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEec
Q 003278 513 NNFSESQRVAEMDFGTAYQGFL-DNHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYDY 591 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~Ey 591 (834)
.+|...+.||.|+||.||+|.. .+++.|++|.+...... ..+.+.+|+.+++.++||||+++++++.+.+..++|+||
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 97 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQP-KKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEY 97 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCc-hHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEe
Confidence 3577778899999999999984 56889999988654333 346788999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccccc
Q 003278 592 SATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLTR 671 (834)
Q Consensus 592 ~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~~ 671 (834)
+++++|..++... .++|..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++..+..
T Consensus 98 ~~~~~L~~~~~~~-------~l~~~~~~~i~~~l~~al~~LH~---~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~ 167 (296)
T cd06655 98 LAGGSLTDVVTET-------CMDEAQIAAVCRECLQALEFLHA---NQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITP 167 (296)
T ss_pred cCCCcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccchhccc
Confidence 9999999987532 37899999999999999999997 6999999999999999999999999999876543
Q ss_pred CCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhhcCcccc
Q 003278 672 NDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEARKRPLAE 751 (834)
Q Consensus 672 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (834)
... ......|+..|+|||.+.+..++.++|||||||++|||+||+.||....+...+. .......+ .
T Consensus 168 ~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~----~~~~~~~~--~ 234 (296)
T cd06655 168 EQS-------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY----LIATNGTP--E 234 (296)
T ss_pred ccc-------cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH----HHHhcCCc--c
Confidence 211 1123468899999999998889999999999999999999999986543322211 11111111 0
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 752 LVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 752 ~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
... ....+ . .+.+++.+||..||++|||+.+|++
T Consensus 235 ~~~---~~~~~-~---~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 235 LQN---PEKLS-P---IFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred cCC---cccCC-H---HHHHHHHHHhhcChhhCCCHHHHhh
Confidence 000 11111 2 3445566999999999999999984
No 493
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=3.1e-35 Score=314.04 Aligned_cols=259 Identities=20% Similarity=0.254 Sum_probs=193.7
Q ss_pred CcCCcccccCCcEEEEEEEC----CCcEEEEEEecCCC-ChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCC------e
Q 003278 516 SESQRVAEMDFGTAYQGFLD----NHQYVLVKRLGMSK-CPALRTRFSNELQNLARLRHRNLVQLCGWCTEQG------E 584 (834)
Q Consensus 516 ~~~~~ig~g~~g~vy~~~~~----~~~~vavK~~~~~~-~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~------~ 584 (834)
...+.||+|+||.||+|.+. .+..||||.+..+. .....+++.+|++++++++||||+++++++...+ .
T Consensus 2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 81 (273)
T cd05074 2 TLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPI 81 (273)
T ss_pred cchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccc
Confidence 34567999999999999863 35789999987543 2334567899999999999999999999886532 3
Q ss_pred EEEEEeccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeee
Q 003278 585 MLVIYDYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFA 664 (834)
Q Consensus 585 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfG 664 (834)
.++++||+.+|+|..++...........+++.....++.|++.||+|||+ .+|+||||||+|||+++++.+|++|||
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~nili~~~~~~kl~dfg 158 (273)
T cd05074 82 PMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSS---KNFIHRDLAARNCMLNENMTVCVADFG 158 (273)
T ss_pred eEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccchhhEEEcCCCCEEECccc
Confidence 47889999999999887543211122347888899999999999999996 689999999999999999999999999
Q ss_pred eccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHHH
Q 003278 665 LAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEFE 743 (834)
Q Consensus 665 la~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~~ 743 (834)
+++....... ........+++.|++||.+....++.++|||||||++|||++ |+.|+...... .......
T Consensus 159 ~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~-~~~~~~~--- 229 (273)
T cd05074 159 LSKKIYSGDY-----YRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS-EIYNYLI--- 229 (273)
T ss_pred ccccccCCcc-----eecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH-HHHHHHH---
Confidence 9986532211 011112345678999999998899999999999999999999 77777533221 1111111
Q ss_pred hhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHccC
Q 003278 744 ARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILDGN 797 (834)
Q Consensus 744 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~~~ 797 (834)
.. .... .... ....+.+++.+||+.+|++|||+.+|.+.|+++
T Consensus 230 ~~-~~~~------~~~~----~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 230 KG-NRLK------QPPD----CLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred cC-CcCC------CCCC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 10 1100 0011 123566778899999999999999999999764
No 494
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=6.8e-35 Score=314.20 Aligned_cols=261 Identities=20% Similarity=0.240 Sum_probs=197.2
Q ss_pred hCcCcCCcccccCCcEEEEEEEC-CCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeC--CeEEEEE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQ--GEMLVIY 589 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~--~~~~lv~ 589 (834)
++|...++||.|++|.||++... +++.+|+|.+..........+|.+|++++++++||||++++++|.+. +.+++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 35777889999999999999974 57889999987655545567899999999999999999999988653 4689999
Q ss_pred eccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeecccc
Q 003278 590 DYSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFL 669 (834)
Q Consensus 590 Ey~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~ 669 (834)
||+++++|.+++..... ....+++.....|+.|++.||+|||+ .+++|+||+|+||+++.++.++|+|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~ 155 (287)
T cd06621 81 EYCEGGSLDSIYKKVKK--RGGRIGEKVLGKIAESVLKGLSYLHS---RKIIHRDIKPSNILLTRKGQVKLCDFGVSGEL 155 (287)
T ss_pred EecCCCCHHHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecCCeEEEeeccccccc
Confidence 99999999988754221 12247788889999999999999996 69999999999999999999999999998654
Q ss_pred ccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHhCCCccCCCCCc-hhHHHHHHHHHhhcCc
Q 003278 670 TRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVTGQMAVDFRLPE-GLLVKRVHEFEARKRP 748 (834)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~-~~~~~~~~~~~~~~~~ 748 (834)
.... .....|+..|+|||.+.+..++.++|||||||++|||+||+.|+.....+ ....... ..... ..
T Consensus 156 ~~~~---------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~-~~ 224 (287)
T cd06621 156 VNSL---------AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELL-SYIVN-MP 224 (287)
T ss_pred cccc---------cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHH-HHHhc-CC
Confidence 3211 11345788999999999999999999999999999999999998754211 1111111 11111 01
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHH
Q 003278 749 LAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILS 792 (834)
Q Consensus 749 ~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~ 792 (834)
...+.+. .... ......+.+++.+||..+|++||||.||++
T Consensus 225 ~~~~~~~-~~~~--~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 225 NPELKDE-PGNG--IKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred chhhccC-CCCC--CchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 1111111 0000 011234567777999999999999999986
No 495
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=2.4e-35 Score=318.72 Aligned_cols=249 Identities=25% Similarity=0.377 Sum_probs=196.7
Q ss_pred CCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccChhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEEEccCC
Q 003278 113 FDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKGERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVYDYMPN 192 (834)
Q Consensus 113 f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 192 (834)
|.....||+|+||.||++....++..||||.+........+.+.+|+.++++++||||+++++++...+..++||||+++
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~ 103 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG 103 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence 34446799999999999999888999999998765555567789999999999999999999999999999999999999
Q ss_pred CCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhhhhhhh
Q 003278 193 RSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHEL 272 (834)
Q Consensus 193 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~ 272 (834)
++|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|||++..+....
T Consensus 104 ~~L~~~~~~--------~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~ 172 (292)
T cd06658 104 GALTDIVTH--------TRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV 172 (292)
T ss_pred CcHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhccccc
Confidence 999998743 2478899999999999999999985 99999999999999999999999999987532210
Q ss_pred hhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccchHHHHHHH
Q 003278 273 QYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQIILLDWIRR 352 (834)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~l~~~~~~ 352 (834)
.......||+.|+|||.+... .++.++|||||||++|||++|+.|+...... ... ..
T Consensus 173 ----------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvil~el~~g~~p~~~~~~~---~~~---~~ 229 (292)
T cd06658 173 ----------------PKRKSLVGTPYWMAPEVISRL-PYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL---QAM---RR 229 (292)
T ss_pred ----------------ccCceeecCccccCHHHHccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHH---HH
Confidence 012335689999999988654 5788999999999999999999998642211 111 11
Q ss_pred HhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 353 LSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 353 ~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
... ...+.+. .... ....+..+...|+..+|.+||++.++++.
T Consensus 230 ~~~------~~~~~~~-~~~~--~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 230 IRD------NLPPRVK-DSHK--VSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred HHh------cCCCccc-cccc--cCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 100 1111111 0000 11356788889999999999999999874
No 496
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=3.6e-35 Score=312.32 Aligned_cols=253 Identities=23% Similarity=0.340 Sum_probs=193.3
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC-----hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeC--CEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG-----ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHE--DQL 183 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~-----~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~--~~~ 183 (834)
++|+..+.||+|+||.||+|....+|..||||.+.... ....+.+.+|+.++++++||||+++++++.+. +.+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 47888999999999999999998899999999875321 22346788999999999999999999988764 468
Q ss_pred EEEEEccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeecc
Q 003278 184 LLVYDYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFG 263 (834)
Q Consensus 184 ~lV~Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 263 (834)
++||||+++|+|.+++... ..+++....+++.|++.||+|||+. +|+|+||||+|||++.++.+||+|||
T Consensus 82 ~~v~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg 151 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY-------GALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFG 151 (265)
T ss_pred EEEEEecCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCc
Confidence 8999999999999988643 3478888999999999999999986 89999999999999999999999999
Q ss_pred chhhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCcc
Q 003278 264 LARWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQ 343 (834)
Q Consensus 264 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~ 343 (834)
+++.+..... .........||..|+|||.+... .++.++|||||||++|||++|+.|+.....
T Consensus 152 ~~~~~~~~~~-------------~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~--- 214 (265)
T cd06652 152 ASKRLQTICL-------------SGTGMKSVTGTPYWMSPEVISGE-GYGRKADIWSVGCTVVEMLTEKPPWAEFEA--- 214 (265)
T ss_pred cccccccccc-------------cccccccCCCCccccChhhhcCC-CCCcchhHHHHHHHHHHHhhCCCCCCccch---
Confidence 9875422100 00112334589999999988654 578999999999999999999999853211
Q ss_pred chHHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 344 IILLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 344 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
... +....... ..+. .+......+..+...|+. +|.+||++.+|++.
T Consensus 215 --~~~-~~~~~~~~-----~~~~-----~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 215 --MAA-IFKIATQP-----TNPV-----LPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred --HHH-HHHHhcCC-----CCCC-----CchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 111 11111110 0111 111122356677777885 89999999999863
No 497
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=3.1e-35 Score=311.69 Aligned_cols=256 Identities=26% Similarity=0.396 Sum_probs=200.4
Q ss_pred CCCCCCeeeccCCeEEEEEEECCCCeEEEEEEeccc--ChhhHHHHHHHHHHHHhCCCCceeeEeeeEEe--CCEEEEEE
Q 003278 112 GFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEK--GERFEKTFAAELVAVAHLRHRNLVRLRGWCVH--EDQLLLVY 187 (834)
Q Consensus 112 ~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~--~~~~~lV~ 187 (834)
+|+..+.||.|+||.||++....+|..||+|.+... .....+.+.+|+.++++++||||+++++++.. ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 477788999999999999999889999999998643 33445678899999999999999999998864 34689999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhcc--CCCeecCCCCCCceEECCCCceEEeeccch
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQL--ETQIIHRDVKTSNVMLDSQYNARLGDFGLA 265 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~iiHrDlKp~NILld~~~~~kl~DFGla 265 (834)
||+++++|.+++..... ...++++..++.++.|++.||.|||..+ ..+++|+||||+||+++.++.+||+|||++
T Consensus 81 e~~~~~~L~~~l~~~~~---~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~ 157 (265)
T cd08217 81 EYCEGGDLAQLIQKCKK---ERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLA 157 (265)
T ss_pred hhccCCCHHHHHHHHhh---cccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccc
Confidence 99999999999865321 2357899999999999999999999332 359999999999999999999999999999
Q ss_pred hhhhhhhhhhhhcccccccccccccceeeeccccCCCccccccCCCCCcccceeehhhHHHHHHhCCccCCCCCCCccch
Q 003278 266 RWLEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQKGSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII 345 (834)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~ 345 (834)
..+..... ......|++.|+|||.+... .++.++||||||+++++|++|+.|+.... ...
T Consensus 158 ~~~~~~~~----------------~~~~~~~~~~~~~pE~~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~---~~~ 217 (265)
T cd08217 158 KILGHDSS----------------FAKTYVGTPYYMSPEQLNHM-SYDEKSDIWSLGCLIYELCALSPPFTARN---QLQ 217 (265)
T ss_pred ccccCCcc----------------cccccccCCCccChhhhcCC-CCCchhHHHHHHHHHHHHHHCCCcccCcC---HHH
Confidence 76432210 01234589999999998655 57889999999999999999999987532 111
Q ss_pred HHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 346 LLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 346 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
+...+ ..+... .+ +......+.+++..|++.+|++||+|.+|++.
T Consensus 218 ~~~~~----~~~~~~-----~~-----~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 218 LASKI----KEGKFR-----RI-----PYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred HHHHH----hcCCCC-----CC-----ccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 11111 111111 11 11112467899999999999999999999874
No 498
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=5.6e-35 Score=312.47 Aligned_cols=260 Identities=23% Similarity=0.373 Sum_probs=199.8
Q ss_pred hCcCcCCcccccCCcEEEEEEEC------CCcEEEEEEecCCCChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEE
Q 003278 513 NNFSESQRVAEMDFGTAYQGFLD------NHQYVLVKRLGMSKCPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEML 586 (834)
Q Consensus 513 ~~f~~~~~ig~g~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~ 586 (834)
++|.....||+|+||.||+|... +...|++|.+.........+.|.+|++++++++||||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 46777888999999999999864 245799998865544445678999999999999999999999999989999
Q ss_pred EEEeccCCCchhhhhhcCCCCC---CCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeee
Q 003278 587 VIYDYSATRILSHLLFHNNHRI---GHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSF 663 (834)
Q Consensus 587 lv~Ey~~~g~L~~~l~~~~~~~---~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~Df 663 (834)
+||||+++|+|.+++....... ....++|..+..++.|++.||+|||+ .+|+||||||+|||++.++.+|++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSN---ARFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhh---cCcccCcCccceEEEeCCCcEEEccc
Confidence 9999999999999987543211 11258999999999999999999996 68999999999999999999999999
Q ss_pred eeccccccCCCCCcccccCccccccccCccchhccccCCCCccCcchhhHHHHHHHHh-CCCccCCCCCchhHHHHHHHH
Q 003278 664 ALAEFLTRNDHGHRKATSGNRSVRGIFGYMSPEYIESGEATSMADVYSFGVVVLEVVT-GQMAVDFRLPEGLLVKRVHEF 742 (834)
Q Consensus 664 Gla~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~k~DV~SfGvvl~E~~t-G~~p~~~~~~~~~~~~~~~~~ 742 (834)
|++........ .......++..|+|||.+.++.++.++|||||||++|||++ |..|+...... ........
T Consensus 162 ~~~~~~~~~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~-~~~~~~~~- 233 (275)
T cd05046 162 SLSKDVYNSEY------YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE-EVLNRLQA- 233 (275)
T ss_pred ccccccCcccc------cccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH-HHHHHHHc-
Confidence 99875432211 11223356788999999988889999999999999999999 67777532222 11111110
Q ss_pred HhhcCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHHHc
Q 003278 743 EARKRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSILD 795 (834)
Q Consensus 743 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~L~ 795 (834)
.... .. ..... +. .+.+++.+||+.+|++|||+.++++.|.
T Consensus 234 ----~~~~-~~---~~~~~-~~---~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 234 ----GKLE-LP---VPEGC-PS---RLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred ----CCcC-CC---CCCCC-CH---HHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 1110 00 01111 22 4556677999999999999999999885
No 499
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=3.9e-35 Score=319.31 Aligned_cols=248 Identities=25% Similarity=0.353 Sum_probs=194.9
Q ss_pred CCCCCCCeeeccCCeEEEEEEECCCCeEEEEEEecccC---hhhHHHHHHHHHHHHhCCCCceeeEeeeEEeCCEEEEEE
Q 003278 111 NGFDEDEVLGSGGFGKVYRAVLPSDGTVVAVKCLAEKG---ERFEKTFAAELVAVAHLRHRNLVRLRGWCVHEDQLLLVY 187 (834)
Q Consensus 111 ~~f~~~~~LG~G~fG~Vy~~~~~~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 187 (834)
..|+..+.||+|+||.||+|....+|+.||+|.+.... ....+.+.+|+.+++.++||||++++++|...+..++||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 45888899999999999999998889999999886432 233457889999999999999999999999999999999
Q ss_pred EccCCCCHhHHHhcCCCccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCCceEECCCCceEEeeccchhh
Q 003278 188 DYMPNRSLDRVLFRRPENLEAAAPLNWEQRKKIIRGLAAALHYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARW 267 (834)
Q Consensus 188 Ey~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 267 (834)
||++ |+|.+++... ..++++..+..++.|++.||.|||+. +|+||||+|+||+++.++.+||+|||++..
T Consensus 95 e~~~-g~l~~~~~~~------~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~ 164 (307)
T cd06607 95 EYCL-GSASDILEVH------KKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASL 164 (307)
T ss_pred HhhC-CCHHHHHHHc------ccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCccee
Confidence 9997 5776666432 23589999999999999999999985 999999999999999999999999999864
Q ss_pred hhhhhhhhhhcccccccccccccceeeeccccCCCcccccc--CCCCCcccceeehhhHHHHHHhCCccCCCCCCCccch
Q 003278 268 LEHELQYQMRTSSARNHQFHLAETTRIGGTIGYLPPESFQK--GSVATAKSDVFSFGIVVLEVVSGRRAVDLTYPDDQII 345 (834)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~--~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~~ 345 (834)
... .....|++.|+|||.+.. ...++.++|||||||++|||+||+.|+......
T Consensus 165 ~~~--------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~---- 220 (307)
T cd06607 165 VSP--------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM---- 220 (307)
T ss_pred cCC--------------------CCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHH----
Confidence 321 123458899999998742 345788999999999999999999998532111
Q ss_pred HHHHHHHHhhcCccccccccccCCCCCCHHHHHHHHHHHHHhcccCCCCCCchhhHHHH
Q 003278 346 LLDWIRRLSDEGKVLQAGDNRLSDGSYKLCDMEHLTHLALLCTLHNPHLRPSMKWVIEA 404 (834)
Q Consensus 346 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~~V~~~ 404 (834)
........ .. .+.+. .......+.++...||+.+|++||+|.+|+..
T Consensus 221 --~~~~~~~~-~~-----~~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 221 --SALYHIAQ-ND-----SPTLS----SNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred --HHHHHHhc-CC-----CCCCC----chhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 11111111 00 01111 11112467889999999999999999999864
No 500
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=4.9e-35 Score=322.01 Aligned_cols=257 Identities=19% Similarity=0.183 Sum_probs=189.8
Q ss_pred CcCcCCcccccCCcEEEEEEEC-CCcEEEEEEecCCC--ChhHHHHHHHHHHHHHhccCCCceeEEEEEeeCCeEEEEEe
Q 003278 514 NFSESQRVAEMDFGTAYQGFLD-NHQYVLVKRLGMSK--CPALRTRFSNELQNLARLRHRNLVQLCGWCTEQGEMLVIYD 590 (834)
Q Consensus 514 ~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~f~~E~~~l~~l~HpNiv~l~g~~~~~~~~~lv~E 590 (834)
+|...+.||+|+||.||++... ++..||||.+.... .....+.|.+|+.++..++||||+++++++.+.+..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (331)
T cd05597 2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMD 81 (331)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEe
Confidence 5667788999999999999964 57899999986321 12234568899999999999999999999999999999999
Q ss_pred ccCCCchhhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhccCCceeecccccCceeecCCCCceEeeeeeccccc
Q 003278 591 YSATRILSHLLFHNNHRIGHSILQWHHRYNIIKSLASAILYLHEEWNEQVIHRNITSSAITLDPDMNPRLGSFALAEFLT 670 (834)
Q Consensus 591 y~~~g~L~~~l~~~~~~~~~~~l~~~~r~~i~~~ia~gl~yLH~~~~~~iiHrDlK~~NILld~~~~~ki~DfGla~~~~ 670 (834)
|+++|+|.+++..... .+++.....++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++..+.
T Consensus 82 ~~~g~~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 153 (331)
T cd05597 82 YYVGGDLLTLLSKFED-----RLPEDMARFYLAEMVLAIDSVHQ---LGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLL 153 (331)
T ss_pred cCCCCcHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCeEECCCCHHHEEECCCCCEEEEECCceeecC
Confidence 9999999999865322 37788888899999999999996 699999999999999999999999999987543
Q ss_pred cCCCCCcccccCccccccccCccchhcccc-----CCCCccCcchhhHHHHHHHHhCCCccCCCCCchhHHHHHHHHHhh
Q 003278 671 RNDHGHRKATSGNRSVRGIFGYMSPEYIES-----GEATSMADVYSFGVVVLEVVTGQMAVDFRLPEGLLVKRVHEFEAR 745 (834)
Q Consensus 671 ~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-----~~~~~k~DV~SfGvvl~E~~tG~~p~~~~~~~~~~~~~~~~~~~~ 745 (834)
.... .......||+.|||||++.. +.++.++|||||||++|||++|+.||......... ......
T Consensus 154 ~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~----~~i~~~ 223 (331)
T cd05597 154 ADGT------VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETY----GKIMNH 223 (331)
T ss_pred CCCC------ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHH----HHHHcC
Confidence 2211 01122469999999999863 45788999999999999999999998643322111 111111
Q ss_pred cCccccccccccCCCCCHHHHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 003278 746 KRPLAELVDLSLNGEYNHKELMRLIKLGIACTLSNPELRPSMRQILSI 793 (834)
Q Consensus 746 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C~~~~P~~RPtm~~v~~~ 793 (834)
... ..+. ... .....++..+++-++ |...++..||++.++++.
T Consensus 224 ~~~-~~~~--~~~-~~~~~~~~~li~~ll-~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 224 KEH-FQFP--PDV-TDVSEEAKDLIRRLI-CSPETRLGRNGLQDFKDH 266 (331)
T ss_pred CCc-ccCC--Ccc-CCCCHHHHHHHHHHc-cCcccccCCCCHHHHhcC
Confidence 000 0010 000 112344555554322 555566668899988763
Done!