Query 003290
Match_columns 833
No_of_seqs 409 out of 3158
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 20:07:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003290.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003290hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3d2f_A Heat shock protein homo 100.0 1E-107 4E-112 968.2 67.6 627 1-707 2-652 (675)
2 4b9q_A Chaperone protein DNAK; 100.0 1.9E-95 6E-100 858.4 67.5 571 1-681 1-604 (605)
3 2kho_A Heat shock protein 70; 100.0 2.5E-94 8.6E-99 848.8 58.9 569 2-680 3-603 (605)
4 1yuw_A Heat shock cognate 71 k 100.0 4.4E-88 1.5E-92 788.5 45.5 523 2-622 5-553 (554)
5 2v7y_A Chaperone protein DNAK; 100.0 8.2E-78 2.8E-82 696.5 49.3 480 2-612 3-509 (509)
6 3i33_A Heat shock-related 70 k 100.0 3.7E-65 1.3E-69 576.1 43.5 380 1-382 23-403 (404)
7 3qfu_A 78 kDa glucose-regulate 100.0 1.1E-63 3.9E-68 562.1 42.8 374 3-381 20-394 (394)
8 4gni_A Putative heat shock pro 100.0 1.4E-63 4.9E-68 563.8 37.6 378 1-383 13-404 (409)
9 1dkg_D Molecular chaperone DNA 100.0 1.2E-61 4.2E-66 543.4 39.5 372 2-381 3-383 (383)
10 1jce_A ROD shape-determining p 100.0 8E-41 2.8E-45 368.9 21.7 309 2-381 4-327 (344)
11 4e81_A Chaperone protein DNAK; 100.0 5.6E-28 1.9E-32 245.4 24.1 192 390-681 2-216 (219)
12 2fsj_A Hypothetical protein TA 100.0 3.3E-28 1.1E-32 267.3 14.4 227 112-378 95-343 (346)
13 1u00_A HSC66, chaperone protei 99.9 1.4E-26 4.7E-31 237.6 24.9 190 392-681 1-213 (227)
14 2ych_A Competence protein PILM 99.9 1.9E-27 6.6E-32 265.3 16.2 317 3-378 15-373 (377)
15 3h1q_A Ethanolamine utilizatio 99.9 2.3E-25 8E-30 236.9 23.1 202 116-377 71-272 (272)
16 4a2a_A Cell division protein F 99.9 1.5E-24 5.2E-29 243.3 20.0 198 152-380 169-394 (419)
17 1k8k_A ARP3, actin-like protei 99.9 8.8E-25 3E-29 247.0 16.8 227 137-379 107-387 (418)
18 2fxu_A Alpha-actin-1, actin, a 99.9 1.1E-24 3.9E-29 242.3 11.4 213 138-378 101-348 (375)
19 2zgy_A Plasmid segregation pro 99.9 9E-23 3.1E-27 222.1 11.8 227 110-377 72-319 (320)
20 3n8e_A Stress-70 protein, mito 99.9 3.3E-21 1.1E-25 189.1 13.5 141 387-622 18-181 (182)
21 4ehu_A Activator of 2-hydroxyi 99.8 2.2E-19 7.4E-24 191.2 11.7 187 162-381 68-256 (276)
22 1k8k_B ARP2, actin-like protei 99.8 1.4E-19 4.9E-24 202.3 4.0 213 138-378 105-363 (394)
23 3h0x_A 78 kDa glucose-regulate 99.7 8E-18 2.7E-22 160.9 12.9 128 391-612 2-152 (152)
24 3dob_A Heat shock 70 kDa prote 99.7 1.1E-17 3.7E-22 159.6 10.3 128 391-612 2-152 (152)
25 3dqg_A Heat shock 70 kDa prote 99.7 1.2E-17 3.9E-22 159.3 7.2 127 391-612 2-151 (151)
26 3js6_A Uncharacterized PARM pr 99.7 1E-16 3.5E-21 175.9 12.6 208 138-382 114-339 (355)
27 2op6_A Heat shock 70 kDa prote 99.7 1.4E-16 4.8E-21 153.0 11.1 128 391-612 2-152 (152)
28 4apw_A ALP12; actin-like prote 99.6 1.1E-15 3.8E-20 166.2 6.6 204 138-380 106-325 (329)
29 3dwl_A Actin-related protein 3 99.4 1.1E-12 3.9E-17 147.0 11.2 223 138-378 124-395 (427)
30 3qb0_A Actin-related protein 4 99.3 1.1E-11 3.6E-16 140.5 17.4 178 2-244 24-209 (498)
31 3lof_A Heat shock 70 kDa prote 99.2 2.7E-11 9.3E-16 109.8 10.8 82 600-682 3-85 (113)
32 4fo0_A Actin-related protein 8 99.2 1.2E-09 4.1E-14 128.6 21.9 103 130-245 186-294 (593)
33 2d0o_A DIOL dehydratase-reacti 99.2 3.5E-11 1.2E-15 132.9 7.9 195 152-379 369-604 (610)
34 1nbw_A Glycerol dehydratase re 99.1 5.3E-11 1.8E-15 131.9 7.5 192 153-377 372-604 (607)
35 1q5l_A Chaperone protein DNAK; 99.1 2.5E-10 8.5E-15 106.6 8.0 81 386-478 14-117 (135)
36 2p32_A Heat shock 70 kDa prote 99.0 5.3E-10 1.8E-14 102.3 6.5 80 601-681 13-93 (120)
37 1ud0_A HSC70, 70 kDa heat-shoc 98.8 1.4E-09 4.9E-14 98.5 4.3 77 604-681 2-79 (113)
38 1hux_A Activator of (R)-2-hydr 98.8 5.3E-07 1.8E-11 94.8 21.5 171 168-380 77-257 (270)
39 4am6_A Actin-like protein ARP8 97.7 0.00011 3.7E-09 84.3 11.0 125 138-279 222-347 (655)
40 2ivn_A O-sialoglycoprotein end 96.8 0.11 3.8E-06 55.6 22.1 65 310-379 228-298 (330)
41 2ews_A Pantothenate kinase; PA 96.8 0.016 5.4E-07 60.7 14.7 75 298-377 207-286 (287)
42 2e2o_A Hexokinase; acetate and 96.6 0.81 2.8E-05 47.9 26.4 48 331-379 239-287 (299)
43 1t6c_A Exopolyphosphatase; alp 96.4 0.033 1.1E-06 59.3 14.0 76 155-238 102-177 (315)
44 2i7n_A Pantothenate kinase 1; 96.4 0.022 7.5E-07 61.3 12.5 69 304-377 279-358 (360)
45 3vov_A Glucokinase, hexokinase 96.3 0.43 1.5E-05 50.3 22.4 44 163-211 98-141 (302)
46 3lof_A Heat shock 70 kDa prote 96.2 0.017 5.8E-07 51.6 8.9 81 681-774 3-83 (113)
47 3vgl_A Glucokinase; ROK family 96.0 0.3 1E-05 51.9 19.3 44 163-211 96-139 (321)
48 2ch5_A NAGK protein; transfera 96.0 1.9 6.6E-05 46.0 25.8 61 136-206 70-133 (347)
49 4db3_A Glcnac kinase, N-acetyl 95.9 1.3 4.4E-05 47.1 23.5 47 331-377 269-324 (327)
50 3l0q_A Xylulose kinase; xlylul 95.8 0.012 4.1E-07 68.0 7.3 87 297-384 408-494 (554)
51 4htl_A Beta-glucoside kinase; 95.7 0.52 1.8E-05 49.5 19.1 49 331-379 237-291 (297)
52 4bc3_A Xylulose kinase; transf 95.6 0.015 5.2E-07 66.9 7.3 77 304-381 407-483 (538)
53 3hz6_A Xylulokinase; xylulose, 95.6 0.015 5.2E-07 66.4 7.1 80 299-384 375-455 (511)
54 2itm_A Xylulose kinase, xylulo 95.5 0.011 3.8E-07 67.1 5.7 82 299-383 357-438 (484)
55 2zf5_O Glycerol kinase; hypert 95.5 0.017 5.9E-07 65.8 7.2 80 299-383 365-444 (497)
56 3ll3_A Gluconate kinase; xylul 95.4 0.018 6.1E-07 65.8 7.1 82 299-384 364-445 (504)
57 3r8e_A Hypothetical sugar kina 95.4 0.28 9.6E-06 52.2 16.2 45 162-211 116-161 (321)
58 2gup_A ROK family protein; sug 95.4 1.3 4.3E-05 46.2 20.8 43 162-211 93-135 (292)
59 3mdq_A Exopolyphosphatase; str 95.3 0.21 7E-06 53.1 14.5 77 154-238 93-170 (315)
60 3i8b_A Xylulose kinase; strain 95.2 0.015 5.3E-07 66.4 5.5 79 299-382 395-474 (515)
61 3ezw_A Glycerol kinase; glycer 95.0 0.025 8.6E-07 64.9 6.8 83 298-384 371-454 (526)
62 2qm1_A Glucokinase; alpha-beta 94.9 0.47 1.6E-05 50.3 15.9 44 163-211 108-151 (326)
63 3jvp_A Ribulokinase; PSI-II, N 94.9 0.021 7.2E-07 66.2 5.5 80 299-382 410-490 (572)
64 3g25_A Glycerol kinase; IDP007 94.8 0.023 7.9E-07 64.8 5.5 53 331-384 404-456 (501)
65 3h3n_X Glycerol kinase; ATP-bi 94.7 0.025 8.5E-07 64.6 5.3 82 299-384 373-455 (506)
66 4e81_A Chaperone protein DNAK; 94.6 0.094 3.2E-06 52.6 8.9 71 684-772 143-213 (219)
67 3ifr_A Carbohydrate kinase, FG 94.6 0.022 7.4E-07 65.1 4.7 81 299-384 371-452 (508)
68 2dpn_A Glycerol kinase; thermu 94.6 0.039 1.3E-06 62.8 6.8 81 299-383 368-449 (495)
69 2hoe_A N-acetylglucosamine kin 94.6 1.9 6.4E-05 46.9 20.0 67 135-211 147-229 (380)
70 4e1j_A Glycerol kinase; struct 94.5 0.02 6.7E-07 65.7 4.1 53 331-384 425-477 (520)
71 2p3r_A Glycerol kinase; glycer 94.4 0.024 8.4E-07 64.7 4.4 53 331-384 401-453 (510)
72 2d4w_A Glycerol kinase; alpha 94.0 0.066 2.3E-06 61.0 7.0 81 299-383 373-454 (504)
73 2p32_A Heat shock 70 kDa prote 94.0 0.16 5.4E-06 45.7 8.1 80 681-773 12-91 (120)
74 2w40_A Glycerol kinase, putati 93.7 0.086 3E-06 60.0 7.2 82 299-384 376-459 (503)
75 2uyt_A Rhamnulokinase; rhamnos 93.4 0.056 1.9E-06 61.4 5.0 78 297-379 361-439 (489)
76 1ud0_A HSC70, 70 kDa heat-shoc 93.1 0.23 7.8E-06 44.1 7.6 75 687-774 4-78 (113)
77 3eno_A Putative O-sialoglycopr 93.0 7.4 0.00025 41.3 20.6 69 309-382 232-306 (334)
78 3en9_A Glycoprotease, O-sialog 92.4 8.3 0.00028 43.9 21.4 203 136-374 72-297 (540)
79 1zc6_A Probable N-acetylglucos 92.4 12 0.0004 39.0 26.3 64 306-378 227-292 (305)
80 1zbs_A Hypothetical protein PG 91.9 2.4 8.1E-05 44.2 14.8 68 305-379 210-280 (291)
81 1u00_A HSC66, chaperone protei 91.8 0.37 1.3E-05 48.5 8.0 72 683-772 139-210 (227)
82 4b9q_A Chaperone protein DNAK; 89.4 0.83 2.9E-05 53.1 9.3 71 685-773 532-602 (605)
83 3d2f_A Heat shock protein homo 89.0 0.76 2.6E-05 54.1 8.6 78 681-771 545-622 (675)
84 3cer_A Possible exopolyphospha 88.8 1.5 5.2E-05 46.9 10.1 81 154-238 106-191 (343)
85 3h6e_A Carbohydrate kinase, FG 88.7 0.23 7.8E-06 56.1 3.7 72 304-380 362-436 (482)
86 1u6z_A Exopolyphosphatase; alp 88.6 2.7 9.2E-05 47.7 12.5 113 112-238 57-176 (513)
87 1bdg_A Hexokinase; phosphotran 88.4 0.78 2.7E-05 51.1 7.7 61 145-212 167-229 (451)
88 2kho_A Heat shock protein 70; 86.3 1.1 3.8E-05 52.1 7.7 73 682-772 529-601 (605)
89 1iv0_A Hypothetical protein; r 82.8 0.75 2.6E-05 39.6 3.1 21 1-21 1-21 (98)
90 3hi0_A Putative exopolyphospha 80.6 5.5 0.00019 45.0 10.2 73 154-236 104-177 (508)
91 3o8m_A Hexokinase; rnaseh-like 80.5 27 0.00091 38.9 15.4 59 149-214 184-244 (485)
92 3aap_A Ectonucleoside triphosp 79.7 2.3 7.9E-05 45.7 6.3 47 164-211 108-157 (353)
93 3epq_A Putative fructokinase; 79.7 15 0.00052 38.2 12.6 51 153-211 90-140 (302)
94 2ap1_A Putative regulator prot 79.0 22 0.00074 37.3 13.8 44 163-211 120-163 (327)
95 1woq_A Inorganic polyphosphate 77.4 63 0.0021 32.5 16.4 45 163-211 114-158 (267)
96 1nbw_A Glycerol dehydratase re 75.0 9.2 0.00032 43.0 9.4 43 138-180 131-174 (607)
97 2yhx_A Hexokinase B; transfera 74.8 5.7 0.0002 44.1 7.9 56 151-213 164-221 (457)
98 1vhx_A Putative holliday junct 73.9 1.6 5.6E-05 40.7 2.7 21 1-21 3-23 (150)
99 2yhw_A Bifunctional UDP-N-acet 73.6 48 0.0016 34.8 14.8 44 163-211 131-174 (343)
100 3ven_A O-carbamoyltransferase 71.5 54 0.0018 37.3 14.9 67 311-382 292-360 (576)
101 1z05_A Transcriptional regulat 71.1 29 0.001 37.9 12.6 44 163-211 208-251 (429)
102 2d0o_A DIOL dehydratase-reacti 71.0 13 0.00045 41.7 9.4 45 136-180 127-172 (610)
103 1z6r_A MLC protein; transcript 70.9 47 0.0016 35.9 14.2 44 163-211 186-229 (406)
104 3cj1_A Ectonucleoside triphosp 64.8 10 0.00034 42.1 7.0 47 166-212 150-208 (456)
105 2e1z_A Propionate kinase; TDCD 63.9 40 0.0014 36.5 11.3 45 307-355 310-355 (415)
106 4g9i_A Hydrogenase maturation 63.1 14 0.00047 43.9 8.2 63 314-381 693-761 (772)
107 3qbx_A Anhydro-N-acetylmuramic 61.0 16 0.00053 39.2 7.3 72 305-379 260-336 (371)
108 1nu0_A Hypothetical protein YQ 60.6 6.2 0.00021 36.1 3.6 21 2-22 4-24 (138)
109 1hjr_A Holliday junction resol 59.4 8.7 0.0003 36.0 4.5 19 1-19 1-19 (158)
110 3s84_A Apolipoprotein A-IV; fo 59.0 32 0.0011 35.2 9.1 24 600-623 64-87 (273)
111 3cqy_A Anhydro-N-acetylmuramic 57.7 18 0.00061 38.7 7.1 68 305-378 267-341 (370)
112 3djc_A Type III pantothenate k 56.8 6.4 0.00022 40.3 3.4 70 298-377 182-253 (266)
113 3ttc_A HYPF, transcriptional r 55.2 19 0.00063 41.8 7.2 64 311-379 584-651 (657)
114 3pdy_A Plectin; cytoskeleton, 54.3 46 0.0016 32.3 9.2 49 717-766 106-154 (210)
115 1g99_A Acetate kinase; alpha/b 53.4 35 0.0012 36.9 8.6 46 306-355 301-347 (408)
116 4ep4_A Crossover junction endo 53.3 8.7 0.0003 36.3 3.4 19 1-19 1-19 (166)
117 2w40_A Glycerol kinase, putati 51.1 8.7 0.0003 43.3 3.6 20 2-21 5-24 (503)
118 2ews_A Pantothenate kinase; PA 50.9 8.2 0.00028 40.0 3.1 20 2-21 21-40 (287)
119 3ll3_A Gluconate kinase; xylul 50.8 9.3 0.00032 43.1 3.8 20 2-21 5-24 (504)
120 3vth_A Hydrogenase maturation 50.2 23 0.00079 41.8 7.1 65 312-381 679-749 (761)
121 2l7b_A Apolipoprotein E, APO-E 49.6 1.9E+02 0.0066 29.9 13.3 138 599-737 111-267 (307)
122 3khy_A Propionate kinase; csgi 49.5 68 0.0023 34.3 9.9 46 307-356 293-339 (384)
123 2dpn_A Glycerol kinase; thermu 48.8 8.1 0.00028 43.4 2.9 20 2-21 3-22 (495)
124 3zx3_A Ectonucleoside triphosp 48.3 26 0.00088 38.7 6.7 44 167-212 151-199 (452)
125 3ezw_A Glycerol kinase; glycer 47.3 10 0.00034 43.1 3.4 19 3-21 6-24 (526)
126 3nmd_A CGMP dependent protein 46.7 66 0.0022 25.6 6.8 48 583-631 23-71 (72)
127 3g25_A Glycerol kinase; IDP007 46.6 11 0.00037 42.4 3.5 20 2-21 7-26 (501)
128 3ifr_A Carbohydrate kinase, FG 46.2 13 0.00043 42.0 4.0 21 2-22 8-28 (508)
129 4e1j_A Glycerol kinase; struct 45.9 11 0.00038 42.6 3.5 20 2-21 27-46 (520)
130 3h3n_X Glycerol kinase; ATP-bi 45.9 12 0.00042 42.1 3.8 20 2-21 6-25 (506)
131 1hnj_A Beta-ketoacyl-acyl carr 45.1 22 0.00076 37.0 5.5 49 307-358 213-261 (317)
132 3l0q_A Xylulose kinase; xlylul 44.5 14 0.00049 42.1 4.1 20 2-21 6-25 (554)
133 4bc3_A Xylulose kinase; transf 44.5 13 0.00045 42.2 3.8 20 2-21 11-30 (538)
134 2p3r_A Glycerol kinase; glycer 43.4 14 0.00047 41.8 3.7 20 2-21 4-23 (510)
135 4ehp_B Catenin alpha-1; adhere 41.9 40 0.0014 29.2 5.4 81 679-764 25-109 (111)
136 2zf5_O Glycerol kinase; hypert 41.8 13 0.00045 41.7 3.2 20 2-21 4-23 (497)
137 2uyt_A Rhamnulokinase; rhamnos 41.6 10 0.00035 42.5 2.3 19 2-20 5-23 (489)
138 3hz6_A Xylulokinase; xylulose, 41.5 15 0.0005 41.5 3.5 20 2-21 6-25 (511)
139 3i8b_A Xylulose kinase; strain 40.7 17 0.00059 41.0 3.9 18 2-19 6-23 (515)
140 3jvp_A Ribulokinase; PSI-II, N 40.6 15 0.00051 42.1 3.5 19 2-20 6-24 (572)
141 3h6e_A Carbohydrate kinase, FG 40.2 13 0.00044 41.6 2.8 20 2-21 7-26 (482)
142 2itm_A Xylulose kinase, xylulo 39.0 16 0.00056 40.8 3.4 19 3-21 2-20 (484)
143 3kbt_A Beta-I spectrin, spectr 38.6 1.8E+02 0.006 29.9 11.4 48 718-766 112-159 (326)
144 1ub7_A 3-oxoacyl-[acyl-carrier 38.0 29 0.00099 36.1 5.0 47 309-358 217-263 (322)
145 2d4w_A Glycerol kinase; alpha 37.3 16 0.00054 41.2 2.9 20 2-21 3-22 (504)
146 2ebd_A 3-oxoacyl-[acyl-carrier 37.3 31 0.001 35.7 5.0 46 309-357 207-252 (309)
147 3o8m_A Hexokinase; rnaseh-like 37.3 79 0.0027 35.1 8.5 30 193-222 79-109 (485)
148 3r6n_A Desmoplakin; spectrin r 37.0 55 0.0019 36.1 7.1 126 639-767 8-143 (450)
149 3bex_A Type III pantothenate k 36.9 1.2E+02 0.0042 30.2 9.3 20 2-21 4-23 (249)
150 3bex_A Type III pantothenate k 36.3 19 0.00064 36.4 3.0 46 298-344 178-223 (249)
151 3uul_A Utrophin; spectrin repe 36.0 71 0.0024 27.3 6.5 24 717-740 3-26 (118)
152 3f31_A Spectrin alpha chain, b 35.6 2.5E+02 0.0084 25.3 10.5 33 656-688 12-44 (149)
153 1sz2_A Glucokinase, glucose ki 34.6 4E+02 0.014 27.4 16.7 232 122-377 52-324 (332)
154 2iak_A Bullous pemphigoid anti 34.4 55 0.0019 32.0 6.1 25 717-741 121-145 (224)
155 1u5p_A Spectrin alpha chain, b 34.2 3.1E+02 0.01 26.0 11.9 48 718-766 111-158 (216)
156 4ijn_A Acetate kinase, acetoki 34.2 99 0.0034 33.2 8.3 47 306-356 302-349 (398)
157 3lbx_B Beta-I spectrin, spectr 33.8 2.3E+02 0.0078 26.5 10.3 48 718-766 112-159 (185)
158 2h3g_X Biosynthetic protein; p 33.7 24 0.00084 36.0 3.4 72 298-378 180-251 (268)
159 3uul_A Utrophin; spectrin repe 33.6 2.2E+02 0.0074 24.0 13.8 88 635-737 4-99 (118)
160 3kbt_A Beta-I spectrin, spectr 33.5 2.3E+02 0.0077 29.0 11.2 22 717-738 218-239 (326)
161 2yhx_A Hexokinase B; transfera 33.2 1.4E+02 0.0047 32.9 9.6 52 193-244 60-117 (457)
162 3cet_A Conserved archaeal prot 33.1 25 0.00084 37.0 3.3 71 298-376 243-321 (334)
163 1zow_A 3-oxoacyl-[acyl-carrier 32.7 45 0.0015 34.4 5.4 46 309-357 209-254 (313)
164 2x3e_A 3-oxoacyl-[acyl-carrier 32.5 44 0.0015 35.0 5.3 47 309-358 221-267 (331)
165 3uun_A Dystrophin; triple heli 32.4 84 0.0029 26.8 6.4 23 717-739 3-25 (119)
166 3f9m_A Glucokinase; hexokinase 32.1 14 0.00048 41.0 1.3 54 153-213 187-243 (470)
167 3edv_A Spectrin beta chain, br 31.9 4.2E+02 0.014 26.8 14.0 25 717-741 220-244 (323)
168 4am6_A Actin-like protein ARP8 31.8 21 0.00071 41.1 2.7 48 309-356 476-525 (655)
169 1msz_A DNA-binding protein smu 31.6 35 0.0012 28.2 3.3 28 140-167 34-61 (86)
170 3f9m_A Glucokinase; hexokinase 31.6 1.1E+02 0.0037 33.8 8.3 33 193-225 76-113 (470)
171 1mzj_A Beta-ketoacylsynthase I 30.3 46 0.0016 34.9 5.0 46 310-358 229-274 (339)
172 1zxo_A Conserved hypothetical 29.5 22 0.00076 36.6 2.3 66 308-378 211-277 (291)
173 1saz_A Probable butyrate kinas 29.1 33 0.0011 36.9 3.7 48 331-378 295-347 (381)
174 2aa4_A Mannac kinase, putative 28.3 52 0.0018 33.5 4.9 72 301-377 208-286 (289)
175 1saz_A Probable butyrate kinas 27.9 41 0.0014 36.2 4.1 20 2-21 3-22 (381)
176 3uun_A Dystrophin; triple heli 27.7 2.7E+02 0.0092 23.3 15.0 89 634-737 3-99 (119)
177 3sk3_A Acetate kinase, acetoki 27.7 66 0.0023 34.9 5.6 48 306-356 317-365 (415)
178 1u6e_A 3-oxoacyl-[acyl-carrier 26.2 64 0.0022 33.6 5.2 45 310-357 230-274 (335)
179 3r9p_A ACKA; ssgcid, seattle s 26.0 1.6E+02 0.0056 31.4 8.2 131 195-356 196-340 (391)
180 3hm8_A Hexokinase-3; glucose, 25.5 1.7E+02 0.0056 32.1 8.4 33 193-226 58-90 (445)
181 4dfe_A 3-oxoacyl-[acyl-carrier 25.4 72 0.0025 33.3 5.4 48 308-358 230-277 (333)
182 3htv_A D-allose kinase, alloki 24.7 1.4E+02 0.0047 30.8 7.4 48 331-378 239-298 (310)
183 2f9w_A Pantothenate kinase; CO 24.5 52 0.0018 33.6 3.9 19 3-21 25-44 (271)
184 2y6x_A PSB27, photosystem II 1 24.5 3.5E+02 0.012 23.5 11.4 95 635-734 13-109 (113)
185 1ted_A PKS18; thiolase fold, s 23.8 59 0.002 35.0 4.5 47 309-358 284-330 (393)
186 3epq_A Putative fructokinase; 22.7 1.6E+02 0.0053 30.3 7.3 48 331-378 224-288 (302)
187 3s21_A 3-oxoacyl-[ACP] synthas 22.3 94 0.0032 32.7 5.6 50 306-358 240-289 (345)
188 2qyw_A Vesicle transport throu 22.2 1.8E+02 0.0063 24.6 6.4 52 683-734 45-96 (102)
189 4adz_A CSOR; transcription, co 22.0 4.1E+02 0.014 23.8 8.6 45 657-701 50-97 (136)
190 3zyy_X Iron-sulfur cluster bin 21.1 2.8E+02 0.0097 31.7 9.5 98 193-346 205-304 (631)
191 1zxo_A Conserved hypothetical 20.9 12 0.00042 38.6 -1.7 60 137-206 58-119 (291)
192 2kmf_A Photosystem II 11 kDa p 20.2 4.3E+02 0.015 22.9 10.9 94 635-733 17-112 (115)
No 1
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=1.2e-107 Score=968.18 Aligned_cols=627 Identities=40% Similarity=0.695 Sum_probs=568.4
Q ss_pred CeEEEEEcCccceEEEEEECCceEEEcCCCCCccceEEEEEcCCceEecHhhhhhhccCCCchHHHHHHhhCCCCCCHHH
Q 003290 1 MSVVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFGDKQRFIGTAGAASSTMNPKNSISQIKRLIGRQFSDPEL 80 (833)
Q Consensus 1 m~viGID~GTt~s~va~~~~~~~~ii~n~~~~r~tPs~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~llG~~~~~~~~ 80 (833)
|++||||||||||+||++.+|+++|+.|..|+|.|||+|+|.+++++||..|+.++.+||.++++++|||||+.++++.+
T Consensus 2 m~~iGIDlGTtns~va~~~~g~~~ii~n~~g~r~tPS~Vaf~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v 81 (675)
T 3d2f_A 2 STPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDF 81 (675)
T ss_dssp CCCEEEECCSSEEEEEEEETTEEEEECCTTSCSSEECCEEECSSSEEETHHHHHHHTTCGGGEECCHHHHTTCBTTCTTH
T ss_pred CcEEEEEcCCCcEEEEEEECCeeEEEECCCCCcccceEEEECCCcEEecHHHHHhhhhChHhHHHHHHHHhCCCCCcHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccCCceeeeCCCCceEEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEecCccCHHHHHHHHHHH
Q 003290 81 QRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAA 160 (833)
Q Consensus 81 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~ae~~~~~~~~~~VITVP~~f~~~qR~al~~Aa 160 (833)
+.+.+++||.++...+|.+.+.+.+.|+.+.|+|++|++++|++|+..|+.++|.++.++|||||+||++.||+++++|+
T Consensus 82 ~~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa 161 (675)
T 3d2f_A 82 EQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAA 161 (675)
T ss_dssp HHHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHH
Confidence 99999999999998889999999888877889999999999999999999999999999999999999999999999999
Q ss_pred HHcCCccEEeechhHHHHHHHhhhcCCCCC--CCCceEEEEEeCCceEEEEEEEEeCCeEEEEEeeCCCCcccHHHHHHH
Q 003290 161 TIAGLHPLRLFHETTATALAYGIYKTDLPE--NDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVL 238 (833)
Q Consensus 161 ~~AGl~~~~li~EptAaAl~y~~~~~~~~~--~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~d~~lGG~~~D~~l 238 (833)
++|||++++||+||+|||++|++.+.+++. ..+.++||||+||||||+||+++.+|.++|+++.|+.+|||++||++|
T Consensus 162 ~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~l 241 (675)
T 3d2f_A 162 RIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAI 241 (675)
T ss_dssp HHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHH
T ss_pred HHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHHH
Confidence 999999999999999999999987654442 346889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCCCceeEEEeccccCccceEEecHHHHHHHHHHHHHHHHHHH
Q 003290 239 FQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLMEEKDVRGFIKRDEFEQISAPILERVKRPL 318 (833)
Q Consensus 239 ~~~l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~~~~ie~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i 318 (833)
++||..+|..+|++++..+++++.||+.+||++|+.||.+.++.+.+++++++.++.+.|||++|+++|.++++++..+|
T Consensus 242 ~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~i~~~i 321 (675)
T 3d2f_A 242 TEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEPV 321 (675)
T ss_dssp HHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHTTTTHHH
T ss_pred HHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccCceEEEEEeHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998899999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHhCCCCCCCCCchhHHHhHHHHhchhhcCCCcccceEEEeecccc
Q 003290 319 EKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFS 398 (833)
Q Consensus 319 ~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg~~~~~~~npdeava~Gaa~~aa~ls~~~~~~~~~~~d~~~~~ 398 (833)
+++|+.+++...+|+.|+||||+||+|+|+++|++.||.++..+.||++|||+|||++|+++++.|+++++.+.|++||+
T Consensus 322 ~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAa~~a~~ls~~~~v~~~~l~Dv~p~s 401 (675)
T 3d2f_A 322 TKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAIHSPTLRVRPFKFEDIHPYS 401 (675)
T ss_dssp HHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHHTSCEECCSCTTTHHHHHHHHHHHHTCSSCCCCCCEEEEEECSC
T ss_pred HHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhcCCCccccCCcchHHHHHHHHHHHHhCCCCcccceEEEeeeecc
Confidence 99999999999999999999999999999999999999888899999999999999999999999999999999999999
Q ss_pred eEEEEcCCCCcccCcCCCCCceEeeecCCCCcCcceEEEEeecCceEEEEEEecc-------Cc-c-------------c
Q 003290 399 ISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADV-------SE-F-------------E 457 (833)
Q Consensus 399 i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~~~i~~~~~~~-------~~-l-------------~ 457 (833)
|||+|.++ . +...+.+||++|++||++++.+|++..+|++.++|++. +. | +
T Consensus 402 lgi~~~~~-~-------~~~~~~~li~rnt~iP~~k~~~f~~~~~~~~~~~~~ge~~~~~~~n~~lg~f~l~gi~~~~~g 473 (675)
T 3d2f_A 402 VSYSWDKQ-V-------EDEDHMEVFPAGSSFPSTKLITLNRTGDFSMAASYTDITQLPPNTPEQIANWEITGVQLPEGQ 473 (675)
T ss_dssp EEEEECCT-T-------CSCSEEEEECTTEEESEEEEEEEEESSCEEEEEEESCGGGSCTTCCSEEEEEEEECCCCCSSC
T ss_pred eEeeecCC-C-------CCcceEEEEcCCCCCCcccceeeeecCCceEEEEEcCCcccccccCceeeEEEecCcCCCCCC
Confidence 99999876 1 12258999999999999999999999999999988532 11 1 2
Q ss_pred c-ceEEEEEEEcCCceEEEEeceeeeeeeeccccCCCchhhhhcccCCCCCCCCCCCCCCccccccccccCCCCCCCCCC
Q 003290 458 R-AKVKVKVRLNMHGIVSIESATLLEEEEVEVPVTKEPEKEAAKMETDEVPSDAAPPSSSETDVNMQDAKGTADAQGTTD 536 (833)
Q Consensus 458 ~-~~i~v~~~~d~~Gi~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (833)
. ++|+|+|.+|.||+|+|+++.++++.+.+
T Consensus 474 ~~~~i~v~f~id~~Gil~V~a~~~~~~~~~~------------------------------------------------- 504 (675)
T 3d2f_A 474 DSVPVKLKLRCDPSGLHTIEEAYTIEDIEAG------------------------------------------------- 504 (675)
T ss_dssp SCEEEEEEEEECTTSCEEEEEEEEECC-----------------------------------------------------
T ss_pred CcceEEEEEEEcCCCcEEEEEEEEeeccccc-------------------------------------------------
Confidence 2 58999999999999999998665431100
Q ss_pred CCCCCCCCCCCCCCCCCccccCCCcccceeEeeeEeeccCCCCCHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHH
Q 003290 537 APGAENGVPESGDKPTQMETDKTPKKKVKKTNIPVSELVYGGMLPVDVQKAVEKEFEMALQDRVMEETKDRKNAVEAYVY 616 (833)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~i~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy 616 (833)
+.|.++++..++|+... ++||+++|++|++++.+|..+|+.++++.++||+||+|||
T Consensus 505 ----------------------~~~~t~~~~~i~i~~~~-~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~~~n~le~~i~ 561 (675)
T 3d2f_A 505 ----------------------SDTKTVKKDDLTIVAHT-FGLDAKKLNELIEKENEMLAQDKLVAETEDRKNTLEEYIY 561 (675)
T ss_dssp ------------------------CCCCEEEECEEEEEC-SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------ccccCcceeeEEEecCC-CCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 02556777888888764 3799999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhccchHHHHHHhhhcchHHHHHHHHHH
Q 003290 617 DMRNKLCDKYQDFVTDSERELFTSKLQETEDWLYEDGEDETKGVYVAKLEELKKQGDPIEERYKEFTDRSSVIDQLAYCI 696 (833)
Q Consensus 617 ~~r~~L~~~~~~~~~~~er~~i~~~l~e~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~R~~e~~~rp~a~~~l~~~l 696 (833)
++|++|++.|..++++++|++|...|+++++|||+++.++++++|++|+++|+++++||..|+.|+..||.+++.|++.|
T Consensus 562 ~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~wl~~~~~~~~~~~~~~~~~~l~~~~~~i~~r~~e~~~rp~~~~~~~~~~ 641 (675)
T 3d2f_A 562 TLRGKLEEEYAPFASDAEKTKLQGMLNKAEEWLYDEGFDSIKAKYIAKYEELASLGNIIRGRYLAKEEEKKQAIRSKQEA 641 (675)
T ss_dssp HHHHHHTTTTGGGSCHHHHHHHHHHHHHHHHHTTTGGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHH
Confidence 99999987789999999999999999999999999888899999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCC
Q 003290 697 NSYREAALSSD 707 (833)
Q Consensus 697 ~~~~~~~~~~~ 707 (833)
++++.++..+.
T Consensus 642 ~~~~~~~~~~~ 652 (675)
T 3d2f_A 642 SQMAAMAEKLA 652 (675)
T ss_dssp -----------
T ss_pred HHHHHHHHHHH
Confidence 99999987654
No 2
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=1.9e-95 Score=858.41 Aligned_cols=571 Identities=30% Similarity=0.485 Sum_probs=526.9
Q ss_pred Ce-EEEEEcCccceEEEEEECCceEEEcCCCCCccceEEEEEcC-CceEecHhhhhhhccCCCchHHHHHHhhCCCCCCH
Q 003290 1 MS-VVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFGD-KQRFIGTAGAASSTMNPKNSISQIKRLIGRQFSDP 78 (833)
Q Consensus 1 m~-viGID~GTt~s~va~~~~~~~~ii~n~~~~r~tPs~V~~~~-~~~~~G~~A~~~~~~~p~~~~~~~k~llG~~~~~~ 78 (833)
|+ |||||||||||+||++.+|.++++.|..|.|+|||+|+|.+ +.+++|..|+.++.++|.++++++|||||+.++++
T Consensus 1 M~~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~ 80 (605)
T 4b9q_A 1 MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDE 80 (605)
T ss_dssp -CCEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTSH
T ss_pred CCcEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCCH
Confidence 54 99999999999999999999999999999999999999975 57999999999999999999999999999999999
Q ss_pred HHHHhhccCCceeeeCCCCceEEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEecCccCHHHHHHHHH
Q 003290 79 ELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVID 158 (833)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~ae~~~~~~~~~~VITVP~~f~~~qR~al~~ 158 (833)
.++.+.+++||.++..++|.+.+.+ .+ ..++|+++++++|++|++.|+.++|.++.++|||||+||++.||+++++
T Consensus 81 ~v~~~~~~~p~~~~~~~~g~~~~~~--~~--~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~ 156 (605)
T 4b9q_A 81 EVQRDVSIMPFKIIAADNGDAWVEV--KG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKD 156 (605)
T ss_dssp HHHHHHTTCSSEEEECTTSBEEEEE--TT--EEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHH
T ss_pred HHHHHhhcCCeEEEEcCCCceEEEE--CC--EEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHH
Confidence 9999999999999998888887765 23 6899999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCccEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEEEEeC----CeEEEEEeeCCCCcccHHH
Q 003290 159 AATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKK----GQLKILGHSFDRSVGGRDF 234 (833)
Q Consensus 159 Aa~~AGl~~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~----~~~~vl~~~~d~~lGG~~~ 234 (833)
|+++|||++++||+||+|||++|++.+.. .+.++||||+||||||+|++++.+ +.++++++.|+.+|||.+|
T Consensus 157 Aa~~AGl~v~~li~EP~AAAlaygl~~~~----~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~ 232 (605)
T 4b9q_A 157 AGRIAGLEVKRIINEPTAAALAYGLDKGT----GNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDF 232 (605)
T ss_dssp HHHHTTCEEEEEEEHHHHHHHHHHTTSCC----SSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHH
T ss_pred HHHHcCCceEEEeCcHHHHHHHhhhhccC----CCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHH
Confidence 99999999999999999999999986542 368999999999999999999998 8999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCCCceeEEEeccccC----ccceEEecHHHHHHHHHHH
Q 003290 235 DEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLMEE----KDVRGFIKRDEFEQISAPI 310 (833)
Q Consensus 235 D~~l~~~l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~~~~ie~l~~~----~d~~~~itr~efe~l~~~~ 310 (833)
|.+|++||..+|..+++.++..+++++.+|+.+||++|+.||.+..+.+.++++..+ .++.++|||++|+++|.++
T Consensus 233 D~~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~ 312 (605)
T 4b9q_A 233 DSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDL 312 (605)
T ss_dssp HHHHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999877654 6789999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHhCCCCCCCCCchhHHHhHHHHhchhhcCCCcccceE
Q 003290 311 LERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQ 390 (833)
Q Consensus 311 ~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg~~~~~~~npdeava~Gaa~~aa~ls~~~~~~~~~ 390 (833)
++++..+|+++|+.+++...+|+.|+||||+||+|+|+++|+++||.++..+.||++|||+|||++|+.+++. ++++.
T Consensus 313 ~~~i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAai~a~~l~~~--~~~~~ 390 (605)
T 4b9q_A 313 VNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGD--VKDVL 390 (605)
T ss_dssp HHHTTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHHTSCCCSSSCTTTHHHHHHHHHHHHHHTS--SCSEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHhccCcCCCcChhHHHHHhHHHHHHHhcCC--CCceE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999987 57899
Q ss_pred EEeecccceEEEEcCCCCcccCcCCCCCceEeeecCCCCcCcceEEEEeecCc----eEEEEEEeccCc------c----
Q 003290 391 VNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGT----FTVDVQYADVSE------F---- 456 (833)
Q Consensus 391 ~~d~~~~~i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~~~~~~~------l---- 456 (833)
+.|++|++|||++.++ .+.+||++|++||++++.+|++..| +.|.+|+|+... |
T Consensus 391 l~dv~p~slgie~~~g------------~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~ 458 (605)
T 4b9q_A 391 LLDVTPLSLGIETMGG------------VMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFN 458 (605)
T ss_dssp EECBCSSCEEEEETTT------------EEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEE
T ss_pred EEeeeeeEEEEEEcCC------------EEEEEEeCCCcCCcceEEEeeeecccCceEEEEEEeccccccccCCEeeEEE
Confidence 9999999999999876 7899999999999999999998765 778889876432 1
Q ss_pred ---------ccceEEEEEEEcCCceEEEEeceeeeeeeeccccCCCchhhhhcccCCCCCCCCCCCCCCccccccccccC
Q 003290 457 ---------ERAKVKVKVRLNMHGIVSIESATLLEEEEVEVPVTKEPEKEAAKMETDEVPSDAAPPSSSETDVNMQDAKG 527 (833)
Q Consensus 457 ---------~~~~i~v~~~~d~~Gi~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 527 (833)
+.++|+|+|.+|.||+|+|++. |
T Consensus 459 l~~i~~~~~g~~~i~v~f~id~~gil~v~a~-------------------------~----------------------- 490 (605)
T 4b9q_A 459 LDGINPAPRGMPQIEVTFDIDADGILHVSAK-------------------------D----------------------- 490 (605)
T ss_dssp EECCCCCSTTCCCEEEEEEECTTSCEEEEEE-------------------------E-----------------------
T ss_pred EeCCCCCcCCCceEEEEEEEcCCcEEEEEEE-------------------------e-----------------------
Confidence 5678999999999999999885 1
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCcccceeEeeeEeeccCCCCCHHHHHHHHHHHHHHhHhhHHHHHHHHH
Q 003290 528 TADAQGTTDAPGAENGVPESGDKPTQMETDKTPKKKVKKTNIPVSELVYGGMLPVDVQKAVEKEFEMALQDRVMEETKDR 607 (833)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~i~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~a 607 (833)
+.++++..++|.... +||+++|++|++++++|.++|+..+++.++
T Consensus 491 ---------------------------------~~tg~~~~i~i~~~~--~ls~~ei~~~~~~~~~~~~~d~~~~~~~~~ 535 (605)
T 4b9q_A 491 ---------------------------------KNSGKEQKITIKASS--GLNEDEIQKMVRDAEANAEADRKCEELVQT 535 (605)
T ss_dssp ---------------------------------TTTCCEECCEEESCC--SCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------cCCCcEEEEEecCCC--CCCHHHHHHHHHHhhhhHhhHHHHHHHHHH
Confidence 122334566776553 799999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhccchHHHHHHh
Q 003290 608 KNAVEAYVYDMRNKLCDKYQDFVTDSERELFTSKLQETEDWLYEDGEDETKGVYVAKLEELKKQGDPIEERYKE 681 (833)
Q Consensus 608 kN~LEs~iy~~r~~L~~~~~~~~~~~er~~i~~~l~e~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~R~~e 681 (833)
||+||+|+|++|+.|+ ++..++++++|++|...|+++++||+.+ +.++|++++++|++.+.||..++++
T Consensus 536 ~n~~e~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 4b9q_A 536 RNQGDHLLHSTRKQVE-EAGDKLPADDKTAIESALTALETALKGE----DKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp HHHHHHHHHHHHHHHH-HHGGGSCHHHHHHHHHHHHHHHHHHHSS----CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHH-hhhhhCCHHHHHHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999997 4788999999999999999999999975 5899999999999999999988763
No 3
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=2.5e-94 Score=848.82 Aligned_cols=569 Identities=30% Similarity=0.491 Sum_probs=523.1
Q ss_pred eEEEEEcCccceEEEEEECCceEEEcCCCCCccceEEEEEc-CCceEecHhhhhhhccCCCchHHHHHHhhCCCCCCHHH
Q 003290 2 SVVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFG-DKQRFIGTAGAASSTMNPKNSISQIKRLIGRQFSDPEL 80 (833)
Q Consensus 2 ~viGID~GTt~s~va~~~~~~~~ii~n~~~~r~tPs~V~~~-~~~~~~G~~A~~~~~~~p~~~~~~~k~llG~~~~~~~~ 80 (833)
.+||||||||||+||++.+|.++|+.|..|.|++||+|+|. +++++||..|+.+...+|.++++++||+||+.++++.+
T Consensus 3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d~~v 82 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV 82 (605)
T ss_dssp -CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBSSSTTH
T ss_pred CEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCCCcHHH
Confidence 48999999999999999999999999999999999999995 46799999999999999999999999999999999999
Q ss_pred HHhhccCCceeeeCCCCceEEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEecCccCHHHHHHHHHHH
Q 003290 81 QRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAA 160 (833)
Q Consensus 81 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~ae~~~~~~~~~~VITVP~~f~~~qR~al~~Aa 160 (833)
+.+.+++||.++...+|.+.+.+ .| +.++|++|++++|++|++.|+.+++.++.++|||||+||++.||+++++|+
T Consensus 83 ~~~~~~~p~~~~~~~~g~~~i~~--~g--~~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~~~A~ 158 (605)
T 2kho_A 83 QRDVSIMPFKIIAADNGDAWVEV--KG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAG 158 (605)
T ss_dssp HHHHHHCSSCEEECTTSBEEEEE--TT--EEECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHhhcCCeEEEECCCCceEEEE--CC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHHHHHH
Confidence 98899999999888888888876 34 589999999999999999999999999999999999999999999999999
Q ss_pred HHcCCccEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEEEEe----CCeEEEEEeeCCCCcccHHHHH
Q 003290 161 TIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFK----KGQLKILGHSFDRSVGGRDFDE 236 (833)
Q Consensus 161 ~~AGl~~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~----~~~~~vl~~~~d~~lGG~~~D~ 236 (833)
++|||++++||+||+|||++|++.+.. .+.++||||+||||||+|++++. ++.++|+++.|+.++||.+||+
T Consensus 159 ~~AGl~v~~li~EP~AAAlay~l~~~~----~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~ 234 (605)
T 2kho_A 159 RIAGLEVKRIINEPTAAALAYGLDKGT----GNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDS 234 (605)
T ss_dssp HTTTCEEEEEEEHHHHHHHHTTTTSSS----SEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHH
T ss_pred HHcCCceEEEecCHHHHHHHhhhcccC----CCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHH
Confidence 999999999999999999999976531 36889999999999999999998 7899999999999999999999
Q ss_pred HHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCCCceeEEEeccccC----ccceEEecHHHHHHHHHHHHH
Q 003290 237 VLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLMEE----KDVRGFIKRDEFEQISAPILE 312 (833)
Q Consensus 237 ~l~~~l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~~~~ie~l~~~----~d~~~~itr~efe~l~~~~~~ 312 (833)
+|++||.++|+.++++++..+++++.+|+.+||++|+.||.+..+.+.+++++++ .++.++|||++|+++|+|+++
T Consensus 235 ~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~ 314 (605)
T 2kho_A 235 RLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVN 314 (605)
T ss_dssp HHHHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCCSTTG
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999899999887653 577889999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHhCCCCCCCCCchhHHHhHHHHhchhhcCCCcccceEEE
Q 003290 313 RVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVN 392 (833)
Q Consensus 313 ~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg~~~~~~~npdeava~Gaa~~aa~ls~~~~~~~~~~~ 392 (833)
++..+|+++|+.+++...+|+.|+||||+||+|+|+++|++.||.++....||++|||+|||++|+.+++. ++++.+.
T Consensus 315 ~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~fg~~~~~~~npd~aVA~GAa~~a~~l~~~--~~~~~l~ 392 (605)
T 2kho_A 315 RSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGD--VKDVLLL 392 (605)
T ss_dssp GGTSHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHHTTTTTS--CCCCCCS
T ss_pred HHHHHHHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhcCCCcCcCCCcchHHHHHHHHHHHHhcCC--ccCceEE
Confidence 99999999999999999999999999999999999999999999989999999999999999999999876 6789999
Q ss_pred eecccceEEEEcCCCCcccCcCCCCCceEeeecCCCCcCcceEEEEeecCc----eEEEEEEeccCc------c------
Q 003290 393 ESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGT----FTVDVQYADVSE------F------ 456 (833)
Q Consensus 393 d~~~~~i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~~~~~~~------l------ 456 (833)
|++|++||+++.++ .+.+||++|++||++++.+|++..| +.|.+++++... |
T Consensus 393 dv~p~slgi~~~~g------------~~~~li~r~t~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~ 460 (605)
T 2kho_A 393 DVTPLSLGIETMGG------------VMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLD 460 (605)
T ss_dssp BCCCCCEEEEETTT------------EEEEEECTTBCSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEE
T ss_pred eeeeeeccccccCC------------ceEEEEecccccCccceEEEEecCCCceEEEEEEEeccCcccccCcEEeEEEec
Confidence 99999999999876 7899999999999999999988655 678888875421 1
Q ss_pred -------ccceEEEEEEEcCCceEEEEeceeeeeeeeccccCCCchhhhhcccCCCCCCCCCCCCCCccccccccccCCC
Q 003290 457 -------ERAKVKVKVRLNMHGIVSIESATLLEEEEVEVPVTKEPEKEAAKMETDEVPSDAAPPSSSETDVNMQDAKGTA 529 (833)
Q Consensus 457 -------~~~~i~v~~~~d~~Gi~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (833)
+.+.|+|+|.+|.||+|+|++. |
T Consensus 461 ~i~~~~~g~~~i~v~f~id~~gil~v~a~-------------------------~------------------------- 490 (605)
T 2kho_A 461 GINPAPRGMPQIEVTFDIDADGILHVSAK-------------------------D------------------------- 490 (605)
T ss_dssp CCCSCCTTCSCEEEEEEECTTSCEEEEEE-------------------------E-------------------------
T ss_pred CCCCCCCCCcEEEEEEEEcCCCceeEEEE-------------------------E-------------------------
Confidence 4568999999999999999874 0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCccccCCCcccceeEeeeEeeccCCCCCHHHHHHHHHHHHHHhHhhHHHHHHHHHHH
Q 003290 530 DAQGTTDAPGAENGVPESGDKPTQMETDKTPKKKVKKTNIPVSELVYGGMLPVDVQKAVEKEFEMALQDRVMEETKDRKN 609 (833)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~i~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~akN 609 (833)
+.++++..++|... ++||++++++|++++.+|..+|+..+++.++||
T Consensus 491 -------------------------------~~tg~~~~i~i~~~--~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n 537 (605)
T 2kho_A 491 -------------------------------KNSGKEQKITIKAS--SGLNEDEIQKMVRDAEANAEADRKFDELVQTRN 537 (605)
T ss_dssp -------------------------------TTTCCEEEEEECTT--SSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHH
T ss_pred -------------------------------cCCCceeecccccc--cCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 11223446677655 479999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhccchHHHHHH
Q 003290 610 AVEAYVYDMRNKLCDKYQDFVTDSERELFTSKLQETEDWLYEDGEDETKGVYVAKLEELKKQGDPIEERYK 680 (833)
Q Consensus 610 ~LEs~iy~~r~~L~~~~~~~~~~~er~~i~~~l~e~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~R~~ 680 (833)
+||+|+|++|+.|++ +..++++++|++|...|+++++||+++ ++++|++++++|++.++||..|++
T Consensus 538 ~~e~~~~~~~~~l~~-~~~~~~~~~~~~i~~~~~~~~~~l~~~----~~~~~~~~~~~l~~~~~~~~~~~~ 603 (605)
T 2kho_A 538 QGDHLLHSTRKQVEE-AGDKLPADDKTAIESALTALETALKGE----DKAAIEAKMQELAQVSQKLMEIAQ 603 (605)
T ss_dssp HHHHHHHHHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHTTSS----CHHHHHHHHHHHHTTCHHHHHHHC
T ss_pred HHHHHHHHHHHHHHh-hhccCCHHHHHHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999975 888999999999999999999999954 789999999999999999999875
No 4
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=4.4e-88 Score=788.51 Aligned_cols=523 Identities=34% Similarity=0.584 Sum_probs=482.5
Q ss_pred eEEEEEcCccceEEEEEECCceEEEcCCCCCccceEEEEEcCCceEecHhhhhhhccCCCchHHHHHHhhCCCCCCHHHH
Q 003290 2 SVVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFGDKQRFIGTAGAASSTMNPKNSISQIKRLIGRQFSDPELQ 81 (833)
Q Consensus 2 ~viGID~GTt~s~va~~~~~~~~ii~n~~~~r~tPs~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~llG~~~~~~~~~ 81 (833)
.+||||||||||+||++.+|+++++.|+.|+|+|||+|+|.++++++|..|+.++.++|.++++++|||||+.++++.++
T Consensus 5 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v~ 84 (554)
T 1yuw_A 5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQ 84 (554)
T ss_dssp CCEEEEECSSEEEEEEECSSSEEECCCTTSCSEEECCEEECSSCEEETHHHHTTTTTCGGGEECCGGGTTTCCSSCSHHH
T ss_pred CEEEEEeCcccEEEEEEECCEEEEEECCCCCeecceEEEEcCCcEEEcHHHHHhhhhChhhehHhhHHhcCCCCCcHHHH
Confidence 48999999999999999999999999999999999999999989999999999999999999999999999999999999
Q ss_pred HhhccCCceeeeCCCCceEEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEecCccCHHHHHHHHHHHH
Q 003290 82 RDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAAT 161 (833)
Q Consensus 82 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~ae~~~~~~~~~~VITVP~~f~~~qR~al~~Aa~ 161 (833)
..++++||.++.. +|.+.+.+.+.+..+.++|+++++++|++|++.|+.+++.++.++|||||+||++.||+++++|++
T Consensus 85 ~~~~~~p~~v~~~-~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~a~~~A~~ 163 (554)
T 1yuw_A 85 SDMKHWPFMVVND-AGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGT 163 (554)
T ss_dssp HHHTTCSSEEEEE-TTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred HHhhcCCeEEEec-CCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 9999999999854 788889898888888999999999999999999999999999999999999999999999999999
Q ss_pred HcCCccEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEEEEeCCeEEEEEeeCCCCcccHHHHHHHHHH
Q 003290 162 IAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQH 241 (833)
Q Consensus 162 ~AGl~~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~d~~lGG~~~D~~l~~~ 241 (833)
+|||++++|++||+|||++|++.+.. ..+.++||||+||||||++++++.++.++|+++.++.++||.+||++|++|
T Consensus 164 ~AGl~~~~li~EP~AAAlay~~~~~~---~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~ 240 (554)
T 1yuw_A 164 IAGLNVLRIINEPTAAAIAYGLDKKV---GAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMVNH 240 (554)
T ss_dssp TTTCEEEEEEEHHHHHHHHTTCSTTC---SSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHH
T ss_pred HcCCCeEEEeCcHHHHHHHHHhhccC---CCCcEEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999976532 136789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCCCceeEEEeccccCccceEEecHHHHHHHHHHHHHHHHHHHHHH
Q 003290 242 FAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLMEEKDVRGFIKRDEFEQISAPILERVKRPLEKA 321 (833)
Q Consensus 242 l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~~~~ie~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~ 321 (833)
|..+|..+++.++..+++++.+|+.+||++|+.||.+..+.+.+++++++.++...|+|++|+++++++++++..+|+++
T Consensus 241 l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g~~~~~~ltr~~~e~l~~~~~~~i~~~i~~~ 320 (554)
T 1yuw_A 241 FIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKA 320 (554)
T ss_dssp HHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSSCCEEEEEEHHHHHHHTHHHHHHTTHHHHHH
T ss_pred HHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCCceEEEEEEHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHhC-CCCCCCCCchhHHHhHHHHhchhhcC--CCcccceEEEeecccc
Q 003290 322 LAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFG-KEPRRTMNASECVARGCALQCAILSP--TFKVREFQVNESFPFS 398 (833)
Q Consensus 322 l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg-~~~~~~~npdeava~Gaa~~aa~ls~--~~~~~~~~~~d~~~~~ 398 (833)
|+.+++...+|+.|+||||+||+|+|++.|++.|+ .++..+.||++|||+|||++|+.+++ .++++++.+.|++|++
T Consensus 321 L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~~~~~~~~dv~p~s 400 (554)
T 1yuw_A 321 LRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLS 400 (554)
T ss_dssp HHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCCCCTTSSCCCCBCSSC
T ss_pred HHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCCccccccceEEEEeeeeE
Confidence 99999999999999999999999999999999996 88889999999999999999999988 4678899999999999
Q ss_pred eEEEEcCCCCcccCcCCCCCceEeeecCCCCcCcceEEEEeecCc----eEEEEEEeccCc------c------------
Q 003290 399 ISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGT----FTVDVQYADVSE------F------------ 456 (833)
Q Consensus 399 i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~~~~~~~------l------------ 456 (833)
||+++.++ .+.+||++|++||++++.+|++..| +.|.+++++... |
T Consensus 401 lgi~~~~g------------~~~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~ 468 (554)
T 1yuw_A 401 LGIETAGG------------VMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAP 468 (554)
T ss_dssp EEEEETTT------------EEEEEECTTCBSSEEEEEEEEESSTTCSEEEEEEEESSSSBGGGSEEEEEEEEECCCCCS
T ss_pred EEEEecCc------------eEEEEEECCCccCceeEEEeeeccCCCceEEEEEEecCccccccCcEEEEEEEeCCCCCc
Confidence 99999876 7899999999999999999987644 678888875422 1
Q ss_pred -ccceEEEEEEEcCCceEEEEeceeeeeeeeccccCCCchhhhhcccCCCCCCCCCCCCCCccccccccccCCCCCCCCC
Q 003290 457 -ERAKVKVKVRLNMHGIVSIESATLLEEEEVEVPVTKEPEKEAAKMETDEVPSDAAPPSSSETDVNMQDAKGTADAQGTT 535 (833)
Q Consensus 457 -~~~~i~v~~~~d~~Gi~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (833)
+.++|+|+|.+|.||+|+|++. |
T Consensus 469 ~g~~~i~v~f~id~~gil~v~a~-------------------------~------------------------------- 492 (554)
T 1yuw_A 469 RGVPQIEVTFDIDANGILNVSAV-------------------------D------------------------------- 492 (554)
T ss_dssp TTCCCEEEEEEECTTCCEEEEEE-------------------------E-------------------------------
T ss_pred ccccEEEEEEEEccCceEEEEEE-------------------------e-------------------------------
Confidence 4568999999999999999884 0
Q ss_pred CCCCCCCCCCCCCCCCCCccccCCCcccceeEeeeEeeccCCCCCHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHH
Q 003290 536 DAPGAENGVPESGDKPTQMETDKTPKKKVKKTNIPVSELVYGGMLPVDVQKAVEKEFEMALQDRVMEETKDRKNAVEAYV 615 (833)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~i~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~akN~LEs~i 615 (833)
+.++++..++|.... ++||++++++|++++.+|+.+|+..+++.++||+||+|+
T Consensus 493 -------------------------~~tg~~~~~~i~~~~-~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~ 546 (554)
T 1yuw_A 493 -------------------------KSTGKENKITITNDK-GRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYA 546 (554)
T ss_dssp -------------------------TTTCCEEEEEECCCS-SCSCHHHHHHHHHHHHHTTTHHHHHTTSSCSCEECSSCC
T ss_pred -------------------------ccCCCceeEEEecCC-CCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHH
Confidence 111233466776553 579999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 003290 616 YDMRNKL 622 (833)
Q Consensus 616 y~~r~~L 622 (833)
|++|++|
T Consensus 547 ~~~~~~l 553 (554)
T 1yuw_A 547 FNMKATV 553 (554)
T ss_dssp SCSCCCC
T ss_pred HHHHHhh
Confidence 9998765
No 5
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=8.2e-78 Score=696.52 Aligned_cols=480 Identities=30% Similarity=0.519 Sum_probs=431.4
Q ss_pred eEEEEEcCccceEEEEEECCceEEEcCCCCCccceEEEEEcCCceEecHhhhhhhccCCCchHHHHHHhhCCCCCCHHHH
Q 003290 2 SVVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFGDKQRFIGTAGAASSTMNPKNSISQIKRLIGRQFSDPELQ 81 (833)
Q Consensus 2 ~viGID~GTt~s~va~~~~~~~~ii~n~~~~r~tPs~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~llG~~~~~~~~~ 81 (833)
.+||||||||||+||++.+|.++++.|..|.+++||+|+|.++++++|..|..+...+| ++++++||+||+++.
T Consensus 3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg~p~~----- 76 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFKNGERLVGEVAKRQAITNP-NTIISIKRHMGTDYK----- 76 (509)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEESSSSEEESHHHHTTTTTCS-SEEECGGGTTTSCCC-----
T ss_pred CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEECCCcEEECHHHHHhHHhCC-CcHHHHHHhcCCCcE-----
Confidence 49999999999999999999999999999999999999998888999999999999999 999999999998432
Q ss_pred HhhccCCceeeeCCCCceEEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEecCccCHHHHHHHHHHHH
Q 003290 82 RDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAAT 161 (833)
Q Consensus 82 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~ae~~~~~~~~~~VITVP~~f~~~qR~al~~Aa~ 161 (833)
+ . ..| ..++|+++++++|++|+..++.+++.++.++|||||+||++.||+++++|++
T Consensus 77 ---------~----------~--~~g--~~~~~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a~~ 133 (509)
T 2v7y_A 77 ---------V----------E--IEG--KQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGR 133 (509)
T ss_dssp ---------E----------E--ETT--EEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred ---------E----------E--ECC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 1 1 123 3689999999999999999999999999999999999999999999999999
Q ss_pred HcCCccEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEEEEeCCeEEEEEeeCCCCcccHHHHHHHHHH
Q 003290 162 IAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQH 241 (833)
Q Consensus 162 ~AGl~~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~d~~lGG~~~D~~l~~~ 241 (833)
.|||++++|++||+|||++|++.+. .+.++||||+||||||++++++.++.++++++.++.++||.+||+.|++|
T Consensus 134 ~AGl~~~~li~Ep~AAAlay~~~~~-----~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~ 208 (509)
T 2v7y_A 134 IAGLEVERIINEPTAAALAYGLDKE-----EDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDY 208 (509)
T ss_dssp HTTCEEEEEEEHHHHHHHHTTGGGS-----CSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHH
T ss_pred HcCCCeEEEecCHHHHHHHHhhccC-----CCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHH
Confidence 9999999999999999999998653 36899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCCCceeEEEeccccC----ccceEEecHHHHHHHHHHHHHHHHHH
Q 003290 242 FAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLMEE----KDVRGFIKRDEFEQISAPILERVKRP 317 (833)
Q Consensus 242 l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~~~~ie~l~~~----~d~~~~itr~efe~l~~~~~~~i~~~ 317 (833)
|.++|..+++.++..+++++.+|+.+||++|+.||.+..+.+.+++++++ .++.+.|+|++|+++|+|+++++..+
T Consensus 209 l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~ 288 (509)
T 2v7y_A 209 LVNQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGP 288 (509)
T ss_dssp HHHHHHHHHSCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHTHHHHHTTHHH
T ss_pred HHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999888998877652 46788999999999999999999999
Q ss_pred HHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHhCCCCCCCCCchhHHHhHHHHhchhhcCCCcccceEEEeeccc
Q 003290 318 LEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPF 397 (833)
Q Consensus 318 i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg~~~~~~~npdeava~Gaa~~aa~ls~~~~~~~~~~~d~~~~ 397 (833)
|+++|+.+++...+|+.|+||||+||+|+|+++|++.||.++....||++|||+|||++|+.+++. ++++.+.|++|+
T Consensus 289 i~~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~aVa~Gaa~~a~~l~~~--~~~~~~~dv~p~ 366 (509)
T 2v7y_A 289 VRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAAIQGGVIAGE--VKDVVLLDVTPL 366 (509)
T ss_dssp HHHHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHHSSCCBCCSCTTTHHHHHHHHHHHHHHTC--CCCCCCCCBCSS
T ss_pred HHHHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHhCCCcCcCCCchhhhHhhHHHHHHHhcCC--ccCceEEEeecc
Confidence 999999999998999999999999999999999999999889999999999999999999999876 578899999999
Q ss_pred ceEEEEcCCCCcccCcCCCCCceEeeecCCCCcCcceEEEEeecCc----eEEEEEEeccCc------c-----------
Q 003290 398 SISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGT----FTVDVQYADVSE------F----------- 456 (833)
Q Consensus 398 ~i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~~~~~~~------l----------- 456 (833)
+||+++.++ .+.+||++|++||++++.+|++..| +.|.+|+++... |
T Consensus 367 slgi~~~~~------------~~~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~v~~ge~~~~~~~~~lg~~~l~~i~~~ 434 (509)
T 2v7y_A 367 SLGIETMGG------------VFTKLIERNTTIPTSKSQVFTTAADNQTTVDIHVLQGERPMAADNKSLGRFQLTGIPPA 434 (509)
T ss_dssp EEEEEETTT------------EEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEEESSSBGGGSEEEEEEEEECCCCC
T ss_pred ccceeecCC------------ceEEEEeCCCcCCcceEEEEEeeccCcEEEEEEEEecCccccccCcEEEEEEEeCCCCC
Confidence 999999876 7899999999999999999987654 678888876432 1
Q ss_pred --ccceEEEEEEEcCCceEEEEeceeeeeeeeccccCCCchhhhhcccCCCCCCCCCCCCCCccccccccccCCCCCCCC
Q 003290 457 --ERAKVKVKVRLNMHGIVSIESATLLEEEEVEVPVTKEPEKEAAKMETDEVPSDAAPPSSSETDVNMQDAKGTADAQGT 534 (833)
Q Consensus 457 --~~~~i~v~~~~d~~Gi~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (833)
+.++|+|+|.+|.||+|+|++. |
T Consensus 435 ~~g~~~i~v~f~id~~gil~v~a~-------------------------~------------------------------ 459 (509)
T 2v7y_A 435 PRGVPQIEVTFDIDANGIVHVRAK-------------------------D------------------------------ 459 (509)
T ss_dssp CTTCSCEEEEEEECTTSCEEEEEE-------------------------E------------------------------
T ss_pred CCcccEEEEEEEEcCCceEEEEEE-------------------------E------------------------------
Confidence 4568999999999999999874 0
Q ss_pred CCCCCCCCCCCCCCCCCCCccccCCCcccceeEeeeEeeccCCCCCHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHH
Q 003290 535 TDAPGAENGVPESGDKPTQMETDKTPKKKVKKTNIPVSELVYGGMLPVDVQKAVEKEFEMALQDRVMEETKDRKNAVE 612 (833)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~i~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~akN~LE 612 (833)
+.++++..++|... ++||++++++|++++.+|..+|+..+++.++||+||
T Consensus 460 --------------------------~~~g~~~~~~i~~~--~~l~~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~e 509 (509)
T 2v7y_A 460 --------------------------LGTNKEQSITIKSS--SGLSEEEIQRMIKEAEENAEADRKRKEAAELRNEAD 509 (509)
T ss_dssp --------------------------TTTCCEEEEEECSS--CSCCSHHHHHHHHHHHHSCGGGGGGGGCCCC-----
T ss_pred --------------------------cCCCcEEEEEEEec--CCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHhhcC
Confidence 11223446677655 479999999999999999999999999999999997
No 6
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=3.7e-65 Score=576.05 Aligned_cols=380 Identities=39% Similarity=0.658 Sum_probs=361.6
Q ss_pred CeEEEEEcCccceEEEEEECCceEEEcCCCCCccceEEEEEcCCceEecHhhhhhhccCCCchHHHHHHhhCCCCCCHHH
Q 003290 1 MSVVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFGDKQRFIGTAGAASSTMNPKNSISQIKRLIGRQFSDPEL 80 (833)
Q Consensus 1 m~viGID~GTt~s~va~~~~~~~~ii~n~~~~r~tPs~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~llG~~~~~~~~ 80 (833)
|.+||||||||||+||++.+|.++++.|..|++++||+|+|.++++++|..|..+..++|.++++++||+||+.++++.+
T Consensus 23 ~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~~~~~~~ 102 (404)
T 3i33_A 23 MPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATV 102 (404)
T ss_dssp CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEECSSCEEETHHHHHTTTTCSTTEECCGGGTTTCCTTSHHH
T ss_pred CCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEECCCCEEecHHHHHhhHhChhhhHHHHHHHhCCCCCcHHH
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccCCceeeeCCCCceEEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEecCccCHHHHHHHHHHH
Q 003290 81 QRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAA 160 (833)
Q Consensus 81 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~ae~~~~~~~~~~VITVP~~f~~~qR~al~~Aa 160 (833)
+...+.+||.+.. .+|...+.+.+.++...++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++|+
T Consensus 103 ~~~~~~~p~~~~~-~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~~a~ 181 (404)
T 3i33_A 103 QSDMKHWPFRVVS-EGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAG 181 (404)
T ss_dssp HHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHHhhCCceEEc-cCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEECCCCCHHHHHHHHHHH
Confidence 9999999999986 578889999888887899999999999999999999999999999999999999999999999999
Q ss_pred HHcCCccEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEEEEeCCeEEEEEeeCCCCcccHHHHHHHHH
Q 003290 161 TIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQ 240 (833)
Q Consensus 161 ~~AGl~~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~d~~lGG~~~D~~l~~ 240 (833)
+.|||+++++++||+|||++|+..... ....+.++||||+||||||++++++.++.++++++.++..+||.+||+.|++
T Consensus 182 ~~AGl~~~~li~Ep~AAa~~~~~~~~~-~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~ 260 (404)
T 3i33_A 182 TITGLNVLRIINEPTAAAIAYGLDKKG-CAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 260 (404)
T ss_dssp HHHTCEEEEEEEHHHHHHHHTTTTSSC-SSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHH
T ss_pred HHcCCCeEEEeccHHHHHHHHHhhccc-ccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHHHHHH
Confidence 999999999999999999999876541 1124688999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCCCceeEEEeccccCccceEEecHHHHHHHHHHHHHHHHHHHHH
Q 003290 241 HFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLMEEKDVRGFIKRDEFEQISAPILERVKRPLEK 320 (833)
Q Consensus 241 ~l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~~~~ie~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~ 320 (833)
++..+|..+++.++..+++.+.+|+..||++|+.||.+....+.++.++++.++.+.|+|++|+++|+++++++..+|.+
T Consensus 261 ~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g~~~~~~i~r~~~~~~~~~~~~~i~~~i~~ 340 (404)
T 3i33_A 261 HLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEK 340 (404)
T ss_dssp HHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHTHHHHHH
T ss_pred HHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccCCceeEEEEcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHh-CCCCCCCCCchhHHHhHHHHhchhhcC
Q 003290 321 ALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFF-GKEPRRTMNASECVARGCALQCAILSP 382 (833)
Q Consensus 321 ~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~f-g~~~~~~~npdeava~Gaa~~aa~ls~ 382 (833)
+|+.+++...+|+.|+|+||+||+|+|++.|++.| +.++....||++|||+|||++|+++++
T Consensus 341 ~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 341 ALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp HHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHHC-
T ss_pred HHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999 688999999999999999999999875
No 7
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=1.1e-63 Score=562.09 Aligned_cols=374 Identities=37% Similarity=0.655 Sum_probs=358.5
Q ss_pred EEEEEcCccceEEEEEECCceEEEcCCCCCccceEEEEEcCCceEecHhhhhhhccCCCchHHHHHHhhCCCCCCHHHHH
Q 003290 3 VVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFGDKQRFIGTAGAASSTMNPKNSISQIKRLIGRQFSDPELQR 82 (833)
Q Consensus 3 viGID~GTt~s~va~~~~~~~~ii~n~~~~r~tPs~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~llG~~~~~~~~~~ 82 (833)
+||||||||||+||++.+|.++++.|..|.+++||+|+|.++++++|..|..+..++|.++++++|++||++++++.++.
T Consensus 20 viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~~~ 99 (394)
T 3qfu_A 20 VIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDDERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDRSVQK 99 (394)
T ss_dssp CEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEECSSCEEESHHHHHTGGGCGGGEECCGGGTTTCCTTCHHHHH
T ss_pred EEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEeCCcEEecHHHHHhhHhCcccCHHHHHHHhCCCCCcHHHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCCceeeeCCCCceEEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEecCccCHHHHHHHHHHHHH
Q 003290 83 DLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATI 162 (833)
Q Consensus 83 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~ae~~~~~~~~~~VITVP~~f~~~qR~al~~Aa~~ 162 (833)
..+++||.++ ..+|...+.+.+.++...++|+++++++|++|+..++.+++.++.++|||||++|++.||+++++|++.
T Consensus 100 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~~~ 178 (394)
T 3qfu_A 100 DIKHLPFNVV-NKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAGTI 178 (394)
T ss_dssp HHTTCSSEEE-EETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred HhhcCCeEEE-cCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcCCCcceEEEEECCCCCHHHHHHHHHHHHH
Confidence 9999999988 567888888888888889999999999999999999999999999999999999999999999999999
Q ss_pred cCCccEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEEEEeCCeEEEEEeeCCCCcccHHHHHHHHHHH
Q 003290 163 AGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHF 242 (833)
Q Consensus 163 AGl~~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~d~~lGG~~~D~~l~~~l 242 (833)
|||+++++++||+|||++|++.... .+.++||||+||||||++++++.++.++++++.++.++||.+||+.|++++
T Consensus 179 aGl~~~~li~Ep~Aaa~~~~~~~~~----~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l 254 (394)
T 3qfu_A 179 AGLNVLRIVNEPTAAAIAYGLDKSD----KEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQL 254 (394)
T ss_dssp TTCEEEEEEEHHHHHHHHTTTTSCS----SCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHH
T ss_pred cCCceEEEecCHHHHHHHHhhccCC----CCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHHHHHH
Confidence 9999999999999999999876532 368899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCCCceeEEEeccccCccceEEecHHHHHHHHHHHHHHHHHHHHHHH
Q 003290 243 AAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLMEEKDVRGFIKRDEFEQISAPILERVKRPLEKAL 322 (833)
Q Consensus 243 ~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~~~~ie~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~l 322 (833)
..+|..+++.++..+++.+.+|+.+||++|+.||.+....+.++.++++.++.+.|+|++|+++++++++++..+|.++|
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~~~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~l 334 (394)
T 3qfu_A 255 IKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKVL 334 (394)
T ss_dssp HHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETTEEEEEEEEHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccCCceeEEEEEHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCccEEEEeCCCCChHHHHHHHHHHh-CCCCCCCCCchhHHHhHHHHhchhhc
Q 003290 323 AETGLSVEDVHMVEVVGSSSRVPAIIKILTEFF-GKEPRRTMNASECVARGCALQCAILS 381 (833)
Q Consensus 323 ~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~f-g~~~~~~~npdeava~Gaa~~aa~ls 381 (833)
+.+++...+|+.|+|+||+|++|+|++.|++.| +.++....||+++||+|||++|+++|
T Consensus 335 ~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 335 QDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp HHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred HHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 999999889999999999999999999999999 78899999999999999999999875
No 8
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=1.4e-63 Score=563.84 Aligned_cols=378 Identities=26% Similarity=0.409 Sum_probs=345.5
Q ss_pred CeEEEEEcCccceEEEEEECCceEEEcCCCCCccceEEEEEcCCceEecHhhhhhhccCCCchHHHHHHhhCCCCCCHHH
Q 003290 1 MSVVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFGDKQRFIGTAGAASSTMNPKNSISQIKRLIGRQFSDPEL 80 (833)
Q Consensus 1 m~viGID~GTt~s~va~~~~~~~~ii~n~~~~r~tPs~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~llG~~~~~~~~ 80 (833)
|.+||||||||||+||++.+|+++++.|..|.+++||+|+|.++++++|..|..+..++|.++++++|++||+.++++.+
T Consensus 13 ~~vvGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~~~~~~ 92 (409)
T 4gni_A 13 RVVIGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYVDGDEYYGQQAKNFLVRNPKNTVAYFRDILGQDFKSVDP 92 (409)
T ss_dssp CCEEEEEECSSEEEEEEEETTEEEEECCTTSCSSEECEEEEETTEEEEHHHHHHHHHHCGGGEEESCGGGTTCCGGGCCC
T ss_pred CcEEEEEcCCCeEEEEEEeCCceEEEECCCCCccCceEEEECCCcEEEcHHHHHhhHhChHhhHHHHHHHhCCCccchhh
Confidence 46999999999999999988999999999999999999999999999999999999999999999999999999877655
Q ss_pred HHhhccCCceeeeCCCCceEEEEEEc----CceeeeCHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEecCccCHHHHHHH
Q 003290 81 QRDLKSLPFAVTEGPDGYPLIHARYL----GETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAV 156 (833)
Q Consensus 81 ~~~~~~~~~~~~~~~~g~~~~~v~~~----~~~~~~~~eel~a~~L~~l~~~ae~~~~~~~~~~VITVP~~f~~~qR~al 156 (833)
+.. ..++.+.. .+|.+.+.+... +....++++++++++|++|++.++.+++.++.++|||||++|++.||++|
T Consensus 93 ~~~--~~~~~~~~-~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~ 169 (409)
T 4gni_A 93 THN--HASAHPQE-AGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKAAL 169 (409)
T ss_dssp GGG--TTSCCCEE-ETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHH
T ss_pred hhh--ccccceec-CCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHH
Confidence 443 33444333 478888888765 35678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCccEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEEEEeCCeEEEEEeeCCCCcccHHHHH
Q 003290 157 IDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDE 236 (833)
Q Consensus 157 ~~Aa~~AGl~~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~d~~lGG~~~D~ 236 (833)
++|++.|||++++|++||+|||++|+..... ...+.++||||+||||||++++++.++.++++++.++..+||.+||+
T Consensus 170 ~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~--~~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~ 247 (409)
T 4gni_A 170 IAAAAAADLEVLQLISEPAAAVLAYDARPEA--TISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDK 247 (409)
T ss_dssp HHHHHHTTCEEEEEEEHHHHHHHHTTC--------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHH
T ss_pred HHHHHHcCCCeEEEEcCHHHHHHHHhccccc--CCCCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHH
Confidence 9999999999999999999999999875421 12478999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhc--cCccCCHHHHHHHHHHHHHHhhhcCCCCceeEEEeccccCccceEEecHHHHHHHHHHHHHHH
Q 003290 237 VLFQHFAAKFKEEYK--IDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLMEEKDVRGFIKRDEFEQISAPILERV 314 (833)
Q Consensus 237 ~l~~~l~~~~~~k~~--~~~~~~~~~~~rL~~~aek~K~~LS~~~~~~~~ie~l~~~~d~~~~itr~efe~l~~~~~~~i 314 (833)
.|+++|...|..+++ .++..+++.+.+|+.+||++|+.||.+..+.+.+++++++.++...|||++|+++|+++++++
T Consensus 248 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i 327 (409)
T 4gni_A 248 VLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDGLDFASTINRLRYETIARTVFEGF 327 (409)
T ss_dssp HHHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeecccCCcceEEEeeHHHHHHHHHHHHHHH
Confidence 999999999999988 888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHhCCC--C------CCCCCchhHHHhHHHHhchhhcCC
Q 003290 315 KRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKE--P------RRTMNASECVARGCALQCAILSPT 383 (833)
Q Consensus 315 ~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg~~--~------~~~~npdeava~Gaa~~aa~ls~~ 383 (833)
..+|+++|+.+++...+|+.|+|+||+||+|+|+++|++.||.+ + ....||++|||+|||++|++....
T Consensus 328 ~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~~~~ 404 (409)
T 4gni_A 328 NRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQASLIQEH 404 (409)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhhhhhhh
Confidence 99999999999999899999999999999999999999999865 3 678999999999999999987654
No 9
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=1.2e-61 Score=543.43 Aligned_cols=372 Identities=34% Similarity=0.577 Sum_probs=344.3
Q ss_pred eEEEEEcCccceEEEEEECCceEEEcCCCCCccceEEEEEcC-CceEecHhhhhhhccCCCchHHHHHHhhCCCCCCHHH
Q 003290 2 SVVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFGD-KQRFIGTAGAASSTMNPKNSISQIKRLIGRQFSDPEL 80 (833)
Q Consensus 2 ~viGID~GTt~s~va~~~~~~~~ii~n~~~~r~tPs~V~~~~-~~~~~G~~A~~~~~~~p~~~~~~~k~llG~~~~~~~~ 80 (833)
.+||||||||||+||++.+|.++++.|..|.+++||+|+|.. +.++||..|+.+..++|.++++++|++||+.++++.+
T Consensus 3 ~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 82 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV 82 (383)
T ss_dssp CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSCSHHH
T ss_pred cEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCCCcHHH
Confidence 489999999999999999999999999999999999999964 6789999999999999999999999999999999999
Q ss_pred HHhhccCCceeeeCCCCceEEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEecCccCHHHHHHHHHHH
Q 003290 81 QRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAA 160 (833)
Q Consensus 81 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~ae~~~~~~~~~~VITVP~~f~~~qR~al~~Aa 160 (833)
+...+.+||.++...+|.+.+.+ .| ..++++++++++|+++++.++.+++.++.++|||||++|++.||+++++|+
T Consensus 83 ~~~~~~~p~~~~~~~~~~~~~~~--~g--~~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~ 158 (383)
T 1dkg_D 83 QRDVSIMPFKIIAADNGDAWVEV--KG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAG 158 (383)
T ss_dssp HHHTTTCSSEEEECSSSBEEEEE--TT--EEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHHHH
T ss_pred HHHhhcCCeEEEEcCCCcEEEEE--CC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 98888999999888888877776 34 479999999999999999999999999999999999999999999999999
Q ss_pred HHcCCccEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEEEEe----CCeEEEEEeeCCCCcccHHHHH
Q 003290 161 TIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFK----KGQLKILGHSFDRSVGGRDFDE 236 (833)
Q Consensus 161 ~~AGl~~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~----~~~~~vl~~~~d~~lGG~~~D~ 236 (833)
+.||++++.+++||+|||++|+.... ..+.++||||+||||||++++++. ++.++++++.++..+||++||+
T Consensus 159 ~~aGl~~~~li~Ep~Aaa~~~~~~~~----~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~ 234 (383)
T 1dkg_D 159 RIAGLEVKRIINEPTAAALAYGLDKG----TGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDS 234 (383)
T ss_dssp HHTTCEESCCCBHHHHHHHHHTCCC-----CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHH
T ss_pred HHcCCceEEEeccHHHHHHHHHhccC----CCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHH
Confidence 99999999999999999999987542 136789999999999999999998 6788999998899999999999
Q ss_pred HHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCCCceeEEEecccc---C-ccceEEecHHHHHHHHHHHHH
Q 003290 237 VLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLME---E-KDVRGFIKRDEFEQISAPILE 312 (833)
Q Consensus 237 ~l~~~l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~~~~ie~l~~---~-~d~~~~itr~efe~l~~~~~~ 312 (833)
.|++++.++|..+++.++..+++.+.+|+..||++|+.||......+.++.+++ + .++.+.|+|++|+++++|+++
T Consensus 235 ~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~~~~~~~~~~~ 314 (383)
T 1dkg_D 235 RLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVN 314 (383)
T ss_dssp HHHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998888888887654 2 466789999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHhCCCCCCCCCchhHHHhHHHHhchhhc
Q 003290 313 RVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILS 381 (833)
Q Consensus 313 ~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg~~~~~~~npdeava~Gaa~~aa~ls 381 (833)
++..+|.++|+.+++...+|+.|+|+||+|++|+|++.|++.||.++....||++|||+|||++|++++
T Consensus 315 ~i~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~ 383 (383)
T 1dkg_D 315 RSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLT 383 (383)
T ss_dssp HHHHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHhCCCCCCCcChHHHHHHHHHHHHHhhC
Confidence 999999999999999888999999999999999999999999998899999999999999999999875
No 10
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=8e-41 Score=368.87 Aligned_cols=309 Identities=19% Similarity=0.288 Sum_probs=242.9
Q ss_pred eEEEEEcCccceEEEEEECCceEEEcCCCCCccceEEEEEcCC--ce-EecHhhhhhhccCCCchHHHHHHhhCCCCCCH
Q 003290 2 SVVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFGDK--QR-FIGTAGAASSTMNPKNSISQIKRLIGRQFSDP 78 (833)
Q Consensus 2 ~viGID~GTt~s~va~~~~~~~~ii~n~~~~r~tPs~V~~~~~--~~-~~G~~A~~~~~~~p~~~~~~~k~llG~~~~~~ 78 (833)
.+|||||||+||++++..+ + ++. .+||+|+|..+ .+ ++|++|+.+..++|.++..
T Consensus 4 ~~igIDlGT~~s~v~~~~~-~--~~~------~~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~------------- 61 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLRGK-G--IVV------NEPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKA------------- 61 (344)
T ss_dssp CEEEEEECSSEEEEEETTT-E--EEE------EEESCEEEETTTCCEEEESHHHHTTTTCCCTTEEE-------------
T ss_pred ceEEEEcCcCcEEEEECCC-C--EEE------eeCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEE-------------
Confidence 5899999999999987533 2 232 27999999765 34 7999998877777765421
Q ss_pred HHHHhhccCCceeeeCCCCceEEEEEEcCceeee-CHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEecCccCHHHHHHHH
Q 003290 79 ELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVF-TPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVI 157 (833)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~-~~eel~a~~L~~l~~~ae~~~~~~~~~~VITVP~~f~~~qR~al~ 157 (833)
.+|++ +|.+ ..+ .++++++++|++++.. ..++ ...+|||||++|++.||++++
T Consensus 62 -------~~p~~-----~g~i----------~~~~~~~~i~~~~l~~~~~~--~~~~--~~~~vitvP~~~~~~~r~~~~ 115 (344)
T 1jce_A 62 -------IRPMR-----DGVI----------ADYTVALVMLRYFINKAKGG--MNLF--KPRVVIGVPIGITDVERRAIL 115 (344)
T ss_dssp -------ECCEE-----TTEE----------SSHHHHHHHHHHHHHHHHTS--CCSC--CCEEEEEECTTCCHHHHHHHH
T ss_pred -------EecCC-----CCee----------CChHHHHHHHHHHHHHHhhc--cccC--CCeEEEEECCCCCHHHHHHHH
Confidence 11221 2321 112 4677888888776542 1233 478999999999999999999
Q ss_pred HHHHHcCCccEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEEEEeCCeEEEEEeeCCCCcccHHHHHH
Q 003290 158 DAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEV 237 (833)
Q Consensus 158 ~Aa~~AGl~~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~d~~lGG~~~D~~ 237 (833)
+|++.||++++.+++||+|||++|+.... .+.++||||+||||||+++++... ++ ..++..+||++||+.
T Consensus 116 ~a~~~aG~~~~~li~ep~Aaa~~~~~~~~-----~~~~~lVvDiGggttdvsv~~~~~----~~-~~~~~~lGG~~id~~ 185 (344)
T 1jce_A 116 DAGLEAGASKVFLIEEPMAAAIGSNLNVE-----EPSGNMVVDIGGGTTEVAVISLGS----IV-TWESIRIAGDEMDEA 185 (344)
T ss_dssp HHHHHTTCSEEEEEEHHHHHHHHTTCCTT-----SSSCEEEEEECSSCEEEEEEETTE----EE-EEEEESCSHHHHHHH
T ss_pred HHHHHcCCCeEeccCCHHHHHHhcCCCCC-----CCceEEEEEeCCCeEEEEEEEcCC----EE-eeCCCCccChhHHHH
Confidence 99999999999999999999999986432 367899999999999999987753 22 235689999999999
Q ss_pred HHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCCCc------eeEEEe--ccccCccceEEecHHHHHHHHHH
Q 003290 238 LFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPE------APLNIE--CLMEEKDVRGFIKRDEFEQISAP 309 (833)
Q Consensus 238 l~~~l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~------~~~~ie--~l~~~~d~~~~itr~efe~l~~~ 309 (833)
|++++.+++ +.++. +..||++|+.|+.... ..+.+. .+.++.++.+.|+|++|+++++|
T Consensus 186 l~~~l~~~~----~~~~~---------~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~ 252 (344)
T 1jce_A 186 IVQYVRETY----RVAIG---------ERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKGGEVREALRS 252 (344)
T ss_dssp HHHHHHHHH----CEECC---------HHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTEEEEEEEEHHHHHHHTHH
T ss_pred HHHHHHHHh----CcccC---------HHHHHHHHHHHhccCccccCCcceEEEeccccCCCCceeEEEeHHHHHHHHHH
Confidence 999998664 44332 3789999999987643 234443 44567778899999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCC--CCCc-cEEEEeCCCCChHHHHHHHHHHhCCCCCCCCCchhHHHhHHHHhchhhc
Q 003290 310 ILERVKRPLEKALAETGLS--VEDV-HMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILS 381 (833)
Q Consensus 310 ~~~~i~~~i~~~l~~~~~~--~~~i-~~ViLvGG~sriP~v~~~l~~~fg~~~~~~~npdeava~Gaa~~aa~ls 381 (833)
+++++...|.++|+.++.. .+.+ +.|+|+||+|++|+|++.|++.|+.++....||+++||+||+++|+.++
T Consensus 253 ~~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~ 327 (344)
T 1jce_A 253 VVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLDKVN 327 (344)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHHSSCEEECSSTTTHHHHHHHHGGGCHH
T ss_pred HHHHHHHHHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHHCCCccccCChHHHHHHHHHHHHhChH
Confidence 9999999999999987532 1224 6899999999999999999999998888888999999999999998665
No 11
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=99.96 E-value=5.6e-28 Score=245.42 Aligned_cols=192 Identities=21% Similarity=0.297 Sum_probs=169.7
Q ss_pred EEEeecccceEEEEcCCCCcccCcCCCCCceEeeecCCCCcCcceEEEEeecCc----eEEEEEEeccCc------c---
Q 003290 390 QVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGT----FTVDVQYADVSE------F--- 456 (833)
Q Consensus 390 ~~~d~~~~~i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~~~~~~~------l--- 456 (833)
++.|++||+|||++.++ .+.+|||+|++||++++.+|++..| +.|.+|+|+... |
T Consensus 2 ~l~DV~p~slGie~~gg------------~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~Lg~f 69 (219)
T 4e81_A 2 LLLDVTPLSLGIETMGG------------VMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQF 69 (219)
T ss_dssp CCCCBCSSCEEEEETTT------------EEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEE
T ss_pred eEEEecCcEEEEEEeCC------------EEEEEEeCcCcccEeEEEEEEeCCCCCceEEEEEEEcCCcccccCCEEEEE
Confidence 57899999999999987 7999999999999999999998776 778998876432 1
Q ss_pred ----------ccceEEEEEEEcCCceEEEEeceeeeeeeeccccCCCchhhhhcccCCCCCCCCCCCCCCcccccccccc
Q 003290 457 ----------ERAKVKVKVRLNMHGIVSIESATLLEEEEVEVPVTKEPEKEAAKMETDEVPSDAAPPSSSETDVNMQDAK 526 (833)
Q Consensus 457 ----------~~~~i~v~~~~d~~Gi~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 526 (833)
|.+.|+|+|.+|.||+|+|++. |
T Consensus 70 ~l~gipp~p~G~~~IeVtf~iD~nGiL~V~a~-------------------------d---------------------- 102 (219)
T 4e81_A 70 NLDGINPAPRGMPQIEVTFDIDADGILHVSAK-------------------------D---------------------- 102 (219)
T ss_dssp EEECCCCCSTTCSCEEEEEEECTTCCEEEEEE-------------------------E----------------------
T ss_pred EEeCCCCCCCCCceEEEEEEeCCCCCEeeeee-------------------------c----------------------
Confidence 5578999999999999999885 1
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCcccceeEeeeEeeccCCCCCHHHHHHHHHHHHHHhHhhHHHHHHHH
Q 003290 527 GTADAQGTTDAPGAENGVPESGDKPTQMETDKTPKKKVKKTNIPVSELVYGGMLPVDVQKAVEKEFEMALQDRVMEETKD 606 (833)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~i~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~ 606 (833)
+.++++..++|.... +||.++|++|++++++|+.+|+..|++.+
T Consensus 103 ----------------------------------~~tg~~~~i~I~~~~--~Ls~eeI~~m~~~a~~~~~eD~~~r~~~e 146 (219)
T 4e81_A 103 ----------------------------------KNSGKEQKITIKASS--GLNEDEIQKMVRDAEANAEADRKFEELVQ 146 (219)
T ss_dssp ----------------------------------TTTCCEEEEEECTTC--SCCHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ----------------------------------cccCccceEeeeccc--cccHHHHHHHHHHHHHhhhccHHHHHHHH
Confidence 333456678887643 69999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhccchHHHHHHh
Q 003290 607 RKNAVEAYVYDMRNKLCDKYQDFVTDSERELFTSKLQETEDWLYEDGEDETKGVYVAKLEELKKQGDPIEERYKE 681 (833)
Q Consensus 607 akN~LEs~iy~~r~~L~~~~~~~~~~~er~~i~~~l~e~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~R~~e 681 (833)
+||.||+|+|++|+.|.+ +.+++++++|++|...|.++++||+++ ++++|.+++++|+..+.||..|++.
T Consensus 147 ~kn~le~~i~~~~~~l~~-~~~~l~~~~k~~i~~~l~~~~~~L~~~----~~~~i~~~~~~L~~~~~~i~~~~~~ 216 (219)
T 4e81_A 147 TRNQGDHLLHSTRKQVEE-AGDKLPADDKTAIESALTALETALKGE----DKAAIEAKMQELAQVSQKLMEIAQQ 216 (219)
T ss_dssp HHHHHHHHHHHHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHHSS----CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHH-hhhhCCHHHHHHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999985 888999999999999999999999986 6899999999999999999998875
No 12
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.95 E-value=3.3e-28 Score=267.29 Aligned_cols=227 Identities=17% Similarity=0.157 Sum_probs=169.9
Q ss_pred eCHHHHHHHHHHHHHHHHHHhcCCCcCcEE--EEecCccCHHHHHHHHHHHHHc--------C------CccEEeechhH
Q 003290 112 FTPTQVLGMLLSNLKAIAESNLNAAVVDCC--IGIPVYFTDLQRRAVIDAATIA--------G------LHPLRLFHETT 175 (833)
Q Consensus 112 ~~~eel~a~~L~~l~~~ae~~~~~~~~~~V--ITVP~~f~~~qR~al~~Aa~~A--------G------l~~~~li~Ept 175 (833)
+..+...++++..|+..++...+.+ .++| |+||++|+..||+++++++..+ | ++.+++++||+
T Consensus 95 ~~~~~~~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep~ 173 (346)
T 2fsj_A 95 LASKEAFPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGV 173 (346)
T ss_dssp TTSTTTHHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETTH
T ss_pred ccChhHHHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccHH
Confidence 3446677788887776542232333 5699 9999999999999999997765 4 35588999999
Q ss_pred HHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEEEEeCCeEEEEEeeCCCCcccHHHHHHHHHHHHHHHHhhhcc--C
Q 003290 176 ATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKI--D 253 (833)
Q Consensus 176 AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~d~~lGG~~~D~~l~~~l~~~~~~k~~~--~ 253 (833)
|||++| +...... ....+++|||+||||||++++++.++. .+.++.++.++||.+|++.|++++.++ |++ +
T Consensus 174 AAa~~~-l~~~~~~-~~~~~vlVvDIGgGTtDv~vi~~~~g~-~v~~~s~~~~lGg~~i~~~I~~~i~~~----~g~~~~ 246 (346)
T 2fsj_A 174 GAALYL-LNQGIIE-QQPGYGVVIDVGSRTTDVLTINLMDME-PVVELSFSLQIGVGDAISALSRKIAKE----TGFVVP 246 (346)
T ss_dssp HHHHHH-HHHTSSC-CCSSEEEEEEECSSCEEEEEEETTTTE-ECGGGCEEESCCHHHHHHHHHHHHHHH----HCCCCC
T ss_pred HHHHHh-hcccccc-ccCCcEEEEECCCCcEEEEEEEecCCE-EEeecCCCcchhHHHHHHHHHHHHHHH----hCCCcC
Confidence 999998 3322111 124679999999999999999987776 566556778999999999998877654 455 3
Q ss_pred ccCCHHHHHHHHHHHHHHhhhcCCCCceeEEEeccccCccceEEecHHHH-HHHHHHHHHHHHHHHHHHHHHcCCCCCCc
Q 003290 254 VSQNARASLRLRVACEKLKKVLSANPEAPLNIECLMEEKDVRGFIKRDEF-EQISAPILERVKRPLEKALAETGLSVEDV 332 (833)
Q Consensus 254 ~~~~~~~~~rL~~~aek~K~~LS~~~~~~~~ie~l~~~~d~~~~itr~ef-e~l~~~~~~~i~~~i~~~l~~~~~~~~~i 332 (833)
+.. ..++ ....+.+ .+. .++++++ +++++++++++...|+++|+.+ .+++
T Consensus 247 i~~---------~~~e---------~~~~~~~----~g~----~~~~~~i~~~~i~~~~~~i~~~i~~~l~~~---~~~i 297 (346)
T 2fsj_A 247 FDL---------AQEA---------LSHPVMF----RQK----QVGGPEVSGPILEDLANRIIENIRLNLRGE---VDRV 297 (346)
T ss_dssp HHH---------HHHH---------TTSCEEE----TTE----EECSHHHHHHHHHHHHHHHHHHHHHHHGGG---GGGE
T ss_pred CCH---------HHHh---------cCCeEeE----CCc----cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhcc
Confidence 321 1222 1112332 222 3559999 9999999999999999999876 4578
Q ss_pred cEEEEeCCCCChHHHHHHHHHHhCCCCCC---CCCchhHHHhHHHHhch
Q 003290 333 HMVEVVGSSSRVPAIIKILTEFFGKEPRR---TMNASECVARGCALQCA 378 (833)
Q Consensus 333 ~~ViLvGG~sriP~v~~~l~~~fg~~~~~---~~npdeava~Gaa~~aa 378 (833)
+.|+|+||++++ +++.|++.|+. +.. ..||++|+|+|+..++.
T Consensus 298 ~~IvL~GGga~l--l~~~l~~~~~~-~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 298 TSLIPVGGGSNL--IGDRFEEIAPG-TLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp EEEEEESTTHHH--HGGGGGGGSTT-CBCCCCTTTTTTHHHHHHHHHHH
T ss_pred cEEEEECCcHHH--HHHHHHHHCcC-cEEeccCCCcHHHHHHHHHHHHh
Confidence 999999999999 99999999973 333 67999999999997654
No 13
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=99.95 E-value=1.4e-26 Score=237.61 Aligned_cols=190 Identities=16% Similarity=0.271 Sum_probs=165.2
Q ss_pred EeecccceEEEEcCCCCcccCcCCCCCceEeeecCCCCcCcceEEEEeecCc----eEEEEEEeccCc------c-----
Q 003290 392 NESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGT----FTVDVQYADVSE------F----- 456 (833)
Q Consensus 392 ~d~~~~~i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~~~~~~~------l----- 456 (833)
.|++||+|||++.++ .+.+||++|++||++++.+|++..| +.|.+|||+... |
T Consensus 1 ~Dv~p~slGie~~~g------------~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~Lg~f~l 68 (227)
T 1u00_A 1 MDVIPLSLGLETMGG------------LVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFAL 68 (227)
T ss_dssp CCBCSSCEEEEETTT------------EEEEEECTTCBSSEEEEEEEECSSTTCCCEEEEEEECSSSBGGGSEEEEEEEE
T ss_pred CCcccceEEEEEeCC------------EEEEEEeCcCccCceEEEEEEecCCCceEEEEEEEecCCccCCCCCEEEEEEE
Confidence 389999999999876 7899999999999999999998765 789999986421 1
Q ss_pred --------ccceEEEEEEEcCCceEEEEeceeeeeeeeccccCCCchhhhhcccCCCCCCCCCCCCCCccccccccccCC
Q 003290 457 --------ERAKVKVKVRLNMHGIVSIESATLLEEEEVEVPVTKEPEKEAAKMETDEVPSDAAPPSSSETDVNMQDAKGT 528 (833)
Q Consensus 457 --------~~~~i~v~~~~d~~Gi~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 528 (833)
+.++|+|+|.+|.||+|+|++. +
T Consensus 69 ~gi~~~p~G~~~I~Vtf~iD~nGiL~V~a~-------------------------d------------------------ 99 (227)
T 1u00_A 69 RGIPALPAGGAHIRVTFQVDADGLLSVTAM-------------------------E------------------------ 99 (227)
T ss_dssp CCCCCCSTTCSCEEEEEEECTTCCEEEEEE-------------------------E------------------------
T ss_pred eCCCCCCCCceEEEEEEEECCCCcEEEEee-------------------------c------------------------
Confidence 4568999999999999999875 0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCccccCCCcccceeEeeeEeeccCCCCCHHHHHHHHHHHHHHhHhhHHHHHHHHHH
Q 003290 529 ADAQGTTDAPGAENGVPESGDKPTQMETDKTPKKKVKKTNIPVSELVYGGMLPVDVQKAVEKEFEMALQDRVMEETKDRK 608 (833)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~i~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~ak 608 (833)
+.++++..++|.... +||.++|++|++++.+|..+|+..+++.++|
T Consensus 100 --------------------------------~~tg~~~~i~i~~~~--~Ls~eei~~~~~~~~~~~~~D~~~~e~~e~k 145 (227)
T 1u00_A 100 --------------------------------KSTGVEASIQVKPSY--GLTDSEIASMIKDSMSYAEQDVKARMLAEQK 145 (227)
T ss_dssp --------------------------------TTTCCEEEEEECCCS--CCCHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred --------------------------------ccccccceEEEEecc--CCCHHHHHHHHHHHHhhhcccHHHHHHHHHH
Confidence 111234467776553 6999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhccchHHHHHHh
Q 003290 609 NAVEAYVYDMRNKLCDKYQDFVTDSERELFTSKLQETEDWLYEDGEDETKGVYVAKLEELKKQGDPIEERYKE 681 (833)
Q Consensus 609 N~LEs~iy~~r~~L~~~~~~~~~~~er~~i~~~l~e~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~R~~e 681 (833)
|+||+|||++|+.|.+ +..++++++|++|...|+++++|||++ ++++|++++++|++++.||..|+..
T Consensus 146 n~le~~i~~~~~~l~~-~~~~~~~~~k~~i~~~l~~~~~wl~~~----d~~~~~~~~~~L~~~~~~i~~r~~~ 213 (227)
T 1u00_A 146 VEAARVLESLHGALAA-DAALLSAAERQVIDDAAAHLSEVAQGD----DVDAIEQAIKNVDKQTQDFAARRMD 213 (227)
T ss_dssp HHHHHHHHHHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHTTSS----CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-hhccCCHHHHHHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999975 788999999999999999999999954 5899999999999999999998763
No 14
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.95 E-value=1.9e-27 Score=265.27 Aligned_cols=317 Identities=16% Similarity=0.190 Sum_probs=207.8
Q ss_pred EEEEEcCccceEEEEEECCceEEEcCCCCCccceEEEEEcCCceEecHhhhhhhccCCCchHHHHHHhhCCCCCCHHHHH
Q 003290 3 VVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFGDKQRFIGTAGAASSTMNPKNSISQIKRLIGRQFSDPELQR 82 (833)
Q Consensus 3 viGID~GTt~s~va~~~~~~~~ii~n~~~~r~tPs~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~llG~~~~~~~~~~ 82 (833)
++|||+||++++++++.++++.+ +..|.+.+|+.+. ......++..+...+|+++++.- .
T Consensus 15 ~vgiDiGt~~i~~~~~~~~~~~i--~~~g~~~~ps~~~------------~~g~i~d~~~~~~~ik~~~~~~~------~ 74 (377)
T 2ych_A 15 ALGLEIGASALKLVEVSGNPPAL--KALASRPTPPGLL------------MEGMVAEPAALAQEIKELLLEAR------T 74 (377)
T ss_dssp CEEEEECSSEEEEEEEETTTTEE--EEEEEEECCTTSE------------ETTEESCHHHHHHHHHHHHHHHT------C
T ss_pred eEEEEeCCCeEEEEEEeCCceEE--EEEEeEECCCCcc------------cCCCcCCHHHHHHHHHHHHHHcC------C
Confidence 78999999999999887666544 2334445555321 12234567788889999988510 0
Q ss_pred hhccCCceeeeCCCCceEEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEecCccCHHH----------
Q 003290 83 DLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQ---------- 152 (833)
Q Consensus 83 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~ae~~~~~~~~~~VITVP~~f~~~q---------- 152 (833)
..+.+ .+..+++.+..+.. . ...++.+++...+ +..++.+++.++.++||++| +.+.+
T Consensus 75 ~~~~v---~~~i~~~~~~~~~~-~--~~~v~~~el~~~i----~~ea~~~~~~~~~~~vid~~--~~~~~~~~~~~~~~~ 142 (377)
T 2ych_A 75 RKRYV---VTALSNLAVILRPI-Q--VPKMPLKEMEEAV----RWEAERYIPFPIDEVVLDFA--PLTPLSEVQEGEQVQ 142 (377)
T ss_dssp CCCEE---EEEECGGGCEEEEE-E--EECCCHHHHHHHH----HHHHGGGCSSCC-CEEEEEE--ESSCGGGSCTTSEEE
T ss_pred CcceE---EEEecCCcEEEEEE-E--CCCCCHHHHHHHH----HHHHhhcCCCChhHceEEEE--EeCCCCCCCCcceeE
Confidence 00111 11122222222211 1 1357888876543 34667788999999999998 33333
Q ss_pred ----------HHHHHHHHHHcCCccEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEEEEeCCeEEEEE
Q 003290 153 ----------RRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILG 222 (833)
Q Consensus 153 ----------R~al~~Aa~~AGl~~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~ 222 (833)
.+++++|++.|||++..+++||+|+|++|+....+ ..+..++|||+||||||+++++ .|.+ .
T Consensus 143 v~~va~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~---~~~~~~~vvDiGggttdi~i~~--~g~~--~- 214 (377)
T 2ych_A 143 VMVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAE---EPDRVFLVLDIGAESTSLVLLR--GDKP--L- 214 (377)
T ss_dssp EEEEEEEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHHT---STTCEEEEEEECSSCEEEEEEE--TTEE--E-
T ss_pred EEEEEecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhccc---ccCCeEEEEEECCCcEEEEEEE--CCEE--E-
Confidence 38899999999999999999999999998754321 1356799999999999999976 4433 2
Q ss_pred eeCCCCcccHHHHHHHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCCCceeEEEeccccCccceEEecHHH
Q 003290 223 HSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLMEEKDVRGFIKRDE 302 (833)
Q Consensus 223 ~~~d~~lGG~~~D~~l~~~l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~~~~ie~l~~~~d~~~~itr~e 302 (833)
..++..+||.+||+.|++. ++++ +..||++|+.++.........+..++-.+....++|++
T Consensus 215 ~~~~~~~GG~~i~~~i~~~--------~~~~-----------~~~aE~~K~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~ 275 (377)
T 2ych_A 215 AVRVLTLSGKDFTEAIARS--------FNLD-----------LLAAEEVKRTYGMATLPTEDEELLLDFDAERERYSPGR 275 (377)
T ss_dssp EEEEESCSHHHHHHHHHHH--------TTCC-----------HHHHHHHHHHTC-------------------------C
T ss_pred EEEeeechHHHHHHHHHHH--------hCCC-----------HHHHHHHHhhcccccccccccccccccccccccCCHHH
Confidence 2346899999999999873 3332 36899999998754321111111111112345789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH--cCCCCCCccEEEEeCCCCChHHHHHHHHHHhCCCCCCC------------------
Q 003290 303 FEQISAPILERVKRPLEKALAE--TGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRT------------------ 362 (833)
Q Consensus 303 fe~l~~~~~~~i~~~i~~~l~~--~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg~~~~~~------------------ 362 (833)
|+++++++++++...|++.|+. ++.....++.|+|+||++++|.|++.|++.||.++...
T Consensus 276 ~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~~~v~~~~P~~~v~~~~~~~~~~~l 355 (377)
T 2ych_A 276 IYDAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLGVNLEPVNPWEAVAVDPKRFESEQL 355 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHTSEEEECCGGGGSBCCTTTSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhCCCeEecCchhhcccCcccCCHHHH
Confidence 9999999999999999999986 35666789999999999999999999999998654322
Q ss_pred --CCchhHHHhHHHHhch
Q 003290 363 --MNASECVARGCALQCA 378 (833)
Q Consensus 363 --~npdeava~Gaa~~aa 378 (833)
.+|..++|+|+|+++.
T Consensus 356 ~~~~p~~a~a~Glal~~~ 373 (377)
T 2ych_A 356 QEIGPEFAVALGLALRGV 373 (377)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HhhhHHHHHHHHHHHcCC
Confidence 1344567888888763
No 15
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.94 E-value=2.3e-25 Score=236.86 Aligned_cols=202 Identities=24% Similarity=0.321 Sum_probs=173.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcCcEEEEecCccCHHHHHHHHHHHHHcCCccEEeechhHHHHHHHhhhcCCCCCCCCce
Q 003290 116 QVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLN 195 (833)
Q Consensus 116 el~a~~L~~l~~~ae~~~~~~~~~~VITVP~~f~~~qR~al~~Aa~~AGl~~~~li~EptAaAl~y~~~~~~~~~~~~~~ 195 (833)
+....+|++++..++...+..+..+++|+|++|...+|+.+..+++.+|+++..++.||+|++++|+. ..
T Consensus 71 ~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~----------~~ 140 (272)
T 3h1q_A 71 IGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGI----------ND 140 (272)
T ss_dssp HHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTC----------SS
T ss_pred HHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcC----------CC
Confidence 45677888888888888888889999999999999999999999999999999999999999998864 13
Q ss_pred EEEEEeCCceEEEEEEEEeCCeEEEEEeeCCCCcccHHHHHHHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhc
Q 003290 196 VAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVL 275 (833)
Q Consensus 196 vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~d~~lGG~~~D~~l~~~l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~L 275 (833)
.+|+|+|||||+++++. .+.+ + ......+||.+||+.|.+++. .+ ...|+++|+.+
T Consensus 141 ~~viDiGggst~~~~~~--~g~~--~-~~~~~~~Gg~~~~~~l~~~l~--------~~-----------~~~ae~~k~~~ 196 (272)
T 3h1q_A 141 GIVVDIGGGTTGIAVIE--KGKI--T-ATFDEPTGGTHLSLVLAGSYK--------IP-----------FEEAETIKKDF 196 (272)
T ss_dssp EEEEEECSSCEEEEEEE--TTEE--E-EECCBSCCHHHHHHHHHHHHT--------CC-----------HHHHHHHHHSS
T ss_pred EEEEEECCCcEEEEEEE--CCEE--E-EEecCCCcHHHHHHHHHHHhC--------CC-----------HHHHHHHHHhc
Confidence 59999999999999976 4433 2 346789999999999988763 11 26788999887
Q ss_pred CCCCceeEEEeccccCccceEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHh
Q 003290 276 SANPEAPLNIECLMEEKDVRGFIKRDEFEQISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFF 355 (833)
Q Consensus 276 S~~~~~~~~ie~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~f 355 (833)
+ ++.+|++++.++++++...+.+.|+..+ +++.|+|+||++++|++++.|++.|
T Consensus 197 ~----------------------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l~~~l~~~l 250 (272)
T 3h1q_A 197 S----------------------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGFSEEFSRFL 250 (272)
T ss_dssp T----------------------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTHHHHHHHHH
T ss_pred C----------------------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccchhhHHHHHHHHh
Confidence 5 5899999999999999999999998654 4789999999999999999999999
Q ss_pred CCCCCCCCCchhHHHhHHHHhc
Q 003290 356 GKEPRRTMNASECVARGCALQC 377 (833)
Q Consensus 356 g~~~~~~~npdeava~Gaa~~a 377 (833)
+.++..+.||++++|+|||++|
T Consensus 251 ~~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 251 GKEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp SSCCBCCSSGGGHHHHHHHTTC
T ss_pred CCCccccCChHHHHHHHHHhcC
Confidence 9999999999999999999875
No 16
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.92 E-value=1.5e-24 Score=243.27 Aligned_cols=198 Identities=15% Similarity=0.054 Sum_probs=156.8
Q ss_pred HHHHHHHHHHHcCCccEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEEEEeCCeEEEEEeeCCCCccc
Q 003290 152 QRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGG 231 (833)
Q Consensus 152 qR~al~~Aa~~AGl~~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~d~~lGG 231 (833)
..+.+.+|++.|||++..+++||+|||++|+.... ....+++||+||||||+++++ +|.+.. .++.++||
T Consensus 169 ~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~~-----~~~gv~vvDiGggttdisi~~--~g~~~~---~~~i~~GG 238 (419)
T 4a2a_A 169 VYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTPE-----KDRGVVVVNLGYNFTGLIAYK--NGVPIK---ISYVPVGM 238 (419)
T ss_dssp HHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHHH-----HHHCEEEEEECSSSEEEEEEE--TTEEEE---EEEESCCH
T ss_pred HHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhcccc-----ccCCEEEEEECCCcEEEEEEE--CCEEEE---EEecccHH
Confidence 45788999999999999999999999998864321 246799999999999999976 555532 33679999
Q ss_pred HHHHHHHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCC-----CceeEEEeccccCccceEEecHHHHHHH
Q 003290 232 RDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSAN-----PEAPLNIECLMEEKDVRGFIKRDEFEQI 306 (833)
Q Consensus 232 ~~~D~~l~~~l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~~-----~~~~~~ie~l~~~~d~~~~itr~efe~l 306 (833)
++||+.|+..+. + .+.+||++|+.++.. ....+.++.+. ......|+|++|.++
T Consensus 239 ~~it~dIa~~l~--------~-----------~~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~--~~~~~~is~~~l~~i 297 (419)
T 4a2a_A 239 KHVIKDVSAVLD--------T-----------SFEESERLIITHGNAVYNDLKEEEIQYRGLD--GNTIKTTTAKKLSVI 297 (419)
T ss_dssp HHHHHHHHHHHT--------C-----------CHHHHHHHHHHHCCSCCTTCCCCEEEEECTT--SCSEEEEEHHHHHHH
T ss_pred HHHHHHHHHHHC--------C-----------CHHHHHHHHHHhccCcccCCCCceEEEeecC--CccceEEcHHHHHHH
Confidence 999999987542 2 137899999998642 34467777653 246788999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCC------CCCCccEEEEeCCCCChHHHHHHHHHHhCCCCC--C-----C----------C
Q 003290 307 SAPILERVKRPLEKALAETGL------SVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPR--R-----T----------M 363 (833)
Q Consensus 307 ~~~~~~~i~~~i~~~l~~~~~------~~~~i~~ViLvGG~sriP~v~~~l~~~fg~~~~--~-----~----------~ 363 (833)
++|.++++...|++.|+.++. ....++.|+|+||+|++|.|++++++.||.++. . + .
T Consensus 298 i~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~~vri~~~~~~~p~~~~~~~~~~~ 377 (419)
T 4a2a_A 298 IHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKSPVRTGCYANSDRPSIINADEVAN 377 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHTSCEEECCGGGSSSCCCBTCHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHCCCeEEEecCCCCchhccCcccccC
Confidence 999999999999999999998 345689999999999999999999999986542 2 1 3
Q ss_pred CchhHHHhHHHHhchhh
Q 003290 364 NASECVARGCALQCAIL 380 (833)
Q Consensus 364 npdeava~Gaa~~aa~l 380 (833)
+|..+++.|.+++++..
T Consensus 378 ~P~~~t~~Gl~~~~~~~ 394 (419)
T 4a2a_A 378 DPSFAAAFGNVFAVSEN 394 (419)
T ss_dssp CGGGHHHHHTTCC----
T ss_pred CchHHHHHHHHHHHhhc
Confidence 89999999999988643
No 17
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.92 E-value=8.8e-25 Score=247.03 Aligned_cols=227 Identities=12% Similarity=0.053 Sum_probs=165.6
Q ss_pred cCcEEEEecCccCHHHHHHHHHHH-HHcCCccEEeechhHHHHHH-HhhhcCCCCCCCCceEEEEEeCCceEEEEEEEEe
Q 003290 137 VVDCCIGIPVYFTDLQRRAVIDAA-TIAGLHPLRLFHETTATALA-YGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFK 214 (833)
Q Consensus 137 ~~~~VITVP~~f~~~qR~al~~Aa-~~AGl~~~~li~EptAaAl~-y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~ 214 (833)
...+|||+|++|+..+|+++.+++ +.+|++.+.+++||+||+++ |.. ..++.... +.||||+|+||||++++.
T Consensus 107 ~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~--~~~~~~~~-~glVvDiG~gtt~v~~v~-- 181 (418)
T 1k8k_A 107 DHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTS--RQVGERTL-TGTVIDSGDGVTHVIPVA-- 181 (418)
T ss_dssp GCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGS--TTCCSCCC-CEEEEEESSSCEEEEEEE--
T ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcc--cccCCCCC-eEEEEEcCCCceEEEEeE--
Confidence 457999999999999999999999 99999999999999999877 421 11221123 679999999999999975
Q ss_pred CCeEEEEEeeCCCCcccHHHHHHHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCCC---------------
Q 003290 215 KGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANP--------------- 279 (833)
Q Consensus 215 ~~~~~vl~~~~d~~lGG~~~D~~l~~~l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~~~--------------- 279 (833)
.|.. +.....+.++||++||+.|.++|..++ +..+... -+..++++|+.++...
T Consensus 182 ~G~~-~~~~~~~~~lGG~~lt~~l~~~l~~~~---~~~~~~~-------~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~ 250 (418)
T 1k8k_A 182 EGYV-IGSCIKHIPIAGRDITYFIQQLLRDRE---VGIPPEQ-------SLETAKAVKERYSYVCPDLVKEFNKYDTDGS 250 (418)
T ss_dssp TTEE-CGGGCEEESCSHHHHHHHHHHHHHTTC---CCCCGGG-------HHHHHHHHHHHHCCCCSCHHHHHHHHHHSGG
T ss_pred CCEE-cccceEEEeCcHHHHHHHHHHHHHhcC---CCCCCHH-------HHHHHHHHHHhhchhcccHHHHHHhhccccc
Confidence 4432 333335678999999999999987653 1222111 1256788888775432
Q ss_pred --ceeEEEeccccCccceEEecHHHH---HHHHHHHH------HHHHHHHHHHHHHcC--CCCCCccEEEEeCCCCChHH
Q 003290 280 --EAPLNIECLMEEKDVRGFIKRDEF---EQISAPIL------ERVKRPLEKALAETG--LSVEDVHMVEVVGSSSRVPA 346 (833)
Q Consensus 280 --~~~~~ie~l~~~~d~~~~itr~ef---e~l~~~~~------~~i~~~i~~~l~~~~--~~~~~i~~ViLvGG~sriP~ 346 (833)
...+.++....+....+.|+++.| |.+++|.+ ..|...|.++|..+. +....++.|+|+||+|++|.
T Consensus 251 ~~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg 330 (418)
T 1k8k_A 251 KWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRD 330 (418)
T ss_dssp GTCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTT
T ss_pred ccceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCcccccc
Confidence 123555544444556789999999 55555542 568889999998865 33445789999999999999
Q ss_pred HHHHHHHHhCC------------------------CCCCCCCchhHHHhHHHHhchh
Q 003290 347 IIKILTEFFGK------------------------EPRRTMNASECVARGCALQCAI 379 (833)
Q Consensus 347 v~~~l~~~fg~------------------------~~~~~~npdeava~Gaa~~aa~ 379 (833)
+++.|++.|+. .+..+.++..++.+||+++|..
T Consensus 331 ~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 387 (418)
T 1k8k_A 331 FGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST 387 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcC
Confidence 99999876641 1223447789999999999863
No 18
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.91 E-value=1.1e-24 Score=242.35 Aligned_cols=213 Identities=11% Similarity=0.100 Sum_probs=152.7
Q ss_pred CcEEEEecCccCHHHHHHHHHH-HHHcCCccEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEEEEeCC
Q 003290 138 VDCCIGIPVYFTDLQRRAVIDA-ATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKG 216 (833)
Q Consensus 138 ~~~VITVP~~f~~~qR~al~~A-a~~AGl~~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~ 216 (833)
..+|||+|++++..+|+++.++ ++.+|++.+.+++||+|||++|+. .+.||||+|+|||+++.+ .+|
T Consensus 101 ~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~----------~~~lVvDiG~gtt~v~~v--~~G 168 (375)
T 2fxu_A 101 HPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGR----------TTGIVLDSGDGVTHNVPI--YEG 168 (375)
T ss_dssp SCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTC----------SSEEEEEECSSCEEEEEE--ETT
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEccchheeeeecCC----------CeEEEEEcCCCceEEeEe--ECC
Confidence 4699999999999999988876 588999999999999999998863 368999999999998775 455
Q ss_pred eEEEEEeeCCCCcccHHHHHHHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCC----------------CCc
Q 003290 217 QLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSA----------------NPE 280 (833)
Q Consensus 217 ~~~vl~~~~d~~lGG~~~D~~l~~~l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~----------------~~~ 280 (833)
.. +.......++||++||+.|.++|..+. +...... -+..++++|+.+.. ...
T Consensus 169 ~~-~~~~~~~~~~GG~~lt~~l~~~l~~~~---~~~~~~~-------~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~ 237 (375)
T 2fxu_A 169 YA-LPHAIMRLDLAGRDLTDYLMKILTERG---YSFVTTA-------EREIVRDIKEKLCYVALDFENEMATAASSSSLE 237 (375)
T ss_dssp EE-CGGGCEEESCCHHHHHHHHHHHHHHHT---CCCCSHH-------HHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTC
T ss_pred EE-eccceEEeccCHHHHHHHHHHHHHhcC---CCCCcHH-------HHHHHHHHHHHHHhhcccHHHHHHhhcccCccC
Confidence 32 333234678999999999999987651 2221111 11345555555432 222
Q ss_pred eeEEEeccccCccceEEecHHHH---HHHHHHH-----HHHHHHHHHHHHHHcC--CCCCCccEEEEeCCCCChHHHHHH
Q 003290 281 APLNIECLMEEKDVRGFIKRDEF---EQISAPI-----LERVKRPLEKALAETG--LSVEDVHMVEVVGSSSRVPAIIKI 350 (833)
Q Consensus 281 ~~~~ie~l~~~~d~~~~itr~ef---e~l~~~~-----~~~i~~~i~~~l~~~~--~~~~~i~~ViLvGG~sriP~v~~~ 350 (833)
..+.++ ++ ..+.|+++.| |.+++|. ...|...|.++|..+. +....++.|+|+||+|++|.++++
T Consensus 238 ~~~~lp---dg--~~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~r 312 (375)
T 2fxu_A 238 KSYELP---DG--QVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADR 312 (375)
T ss_dssp EEEECT---TS--CEEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHH
T ss_pred eEEECC---CC--CEEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHH
Confidence 233332 22 2467888877 3344443 2457788888887653 222345789999999999999999
Q ss_pred HHHHhC--------CCCCCCCCchhHHHhHHHHhch
Q 003290 351 LTEFFG--------KEPRRTMNASECVARGCALQCA 378 (833)
Q Consensus 351 l~~~fg--------~~~~~~~npdeava~Gaa~~aa 378 (833)
|.+.++ .++....||+.++++||+++|.
T Consensus 313 l~~el~~~~p~~~~v~v~~~~~p~~~~w~G~si~a~ 348 (375)
T 2fxu_A 313 MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAS 348 (375)
T ss_dssp HHHHHHHHSCTTCCCCEECCTTTTSHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCeeEEEEcCCCCCccEEcchHHhhC
Confidence 999885 2334567999999999999987
No 19
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.88 E-value=9e-23 Score=222.06 Aligned_cols=227 Identities=12% Similarity=0.089 Sum_probs=150.5
Q ss_pred eeeCHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEecCc-cCHH--HH--HHHHHH------------HHHcCCccEEeec
Q 003290 110 RVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVY-FTDL--QR--RAVIDA------------ATIAGLHPLRLFH 172 (833)
Q Consensus 110 ~~~~~eel~a~~L~~l~~~ae~~~~~~~~~~VITVP~~-f~~~--qR--~al~~A------------a~~AGl~~~~li~ 172 (833)
..+++..+++.+ +.|+. +. ..+.+ .++|+++|.. |... || .++.+- ++.+++..+.++.
T Consensus 72 ~~~~~~~l~~i~-~aL~~-~~-~~~~~-~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~ 147 (320)
T 2zgy_A 72 WQYSDVNVVAVH-HALLT-SG-LPVSE-VDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMP 147 (320)
T ss_dssp GGGSHHHHHHHH-HHHHH-HS-CCSCE-EEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEE
T ss_pred ccchHHHHHHHH-HHHHH-cC-CCCce-EEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEec
Confidence 457788777654 55543 21 11223 3699999987 6531 22 112111 2345667889999
Q ss_pred hhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEEEEeCCeEEEEEeeCCCCcccHHHHHHHHHHHHHHHHhhhcc
Q 003290 173 ETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKI 252 (833)
Q Consensus 173 EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~d~~lGG~~~D~~l~~~l~~~~~~k~~~ 252 (833)
||.||+++|+.... .+..++|+|+||||||+++++ ++.+.+.++.++.++||.+||+.|++++.+ + ++
T Consensus 148 e~~aa~~~~~~~~~-----~~~~~~vvDiGggttd~~v~~--~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~----~-~~ 215 (320)
T 2zgy_A 148 ESIPAGYEVLQELD-----ELDSLLIIDLGGTTLDISQVM--GKLSGISKIYGDSSLGVSLVTSAVKDALSL----A-RT 215 (320)
T ss_dssp SSHHHHHHHHHHSC-----TTCEEEEEEECSSCEEEEEEE--GGGCCEEEEEEECSCCTHHHHHHHHHHTTC----C-SB
T ss_pred CcHHHHHhhhcccc-----CCCCEEEEEcCCCeEEEEEEe--CCeeEEeeecCCccccHHHHHHHHHHHHHH----c-CC
Confidence 99999998873211 357899999999999999987 555557666778899999999999998863 2 33
Q ss_pred CccCCHHHHHHHHHHHHHH-hhhcCCCCceeEEEeccccCccceEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Q 003290 253 DVSQNARASLRLRVACEKL-KKVLSANPEAPLNIECLMEEKDVRGFIKRDEFEQISAPILERVKRPLEKALAETGLSVED 331 (833)
Q Consensus 253 ~~~~~~~~~~rL~~~aek~-K~~LS~~~~~~~~ie~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~ 331 (833)
+++. ..|+++ |..- .. ...... .+. .-.++++.+++++.++.+...|.+.+++ ..+
T Consensus 216 ~i~~---------~~ae~~lk~~~---~~--~~~~~~---i~~--~~~~~~~~~~i~~~~~~~~~~i~~~i~~----~~~ 272 (320)
T 2zgy_A 216 KGSS---------YLADDIIIHRK---DN--NYLKQR---IND--ENKISIVTEAMNEALRKLEQRVLNTLNE----FSG 272 (320)
T ss_dssp GGGH---------HHHHHHHHTTT---CH--HHHHHH---SSS--SCTHHHHHHHHHHHHHHHHHHHHHHHTT----CCC
T ss_pred CCCH---------HHHHHHHHHhh---hh--hcccce---ecC--chhhHHHHHHHHHHHHHHHHHHHHHHHh----hcC
Confidence 3321 234444 3320 00 000000 000 1134555566666666666666666554 257
Q ss_pred ccEEEEeCCCCChHHHHHHHHHHhCC---CCCCCCCchhHHHhHHHHhc
Q 003290 332 VHMVEVVGSSSRVPAIIKILTEFFGK---EPRRTMNASECVARGCALQC 377 (833)
Q Consensus 332 i~~ViLvGG~sriP~v~~~l~~~fg~---~~~~~~npdeava~Gaa~~a 377 (833)
++.|+|+||++++ +++.|++.|+. ++....||++|+|+||++++
T Consensus 273 ~~~vvl~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 273 YTHVMVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp CCEEEEESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred CCeEEEECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 8999999999998 99999999986 57788899999999999875
No 20
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=99.85 E-value=3.3e-21 Score=189.10 Aligned_cols=141 Identities=21% Similarity=0.339 Sum_probs=117.3
Q ss_pred cceEEEeecccceEEEEcCCCCcccCcCCCCCceEeeecCCCCcCcceEEEEeecCc----eEEEEEEeccCc------c
Q 003290 387 REFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGT----FTVDVQYADVSE------F 456 (833)
Q Consensus 387 ~~~~~~d~~~~~i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~~~~~~~------l 456 (833)
..|.+.|++||+|||+|.++ .+.+||++|++||++++.+|++..| +.|.+|+|+... |
T Consensus 18 ~~f~l~DV~P~slGie~~gg------------~~~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~VyqGE~~~~~dn~~L 85 (182)
T 3n8e_A 18 LYFQSMDVTPLSLGIETLGG------------VFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLL 85 (182)
T ss_dssp ------CBCSSCEEEECTTS------------BEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEE
T ss_pred CCEEEEEecCCEEEEEEeCC------------EEEEEEeCCCccCEEEEEEEEECCCCccEEEEEEEEcCccccccCceE
Confidence 46789999999999999876 7899999999999999999998776 778998876432 1
Q ss_pred -------------ccceEEEEEEEcCCceEEEEeceeeeeeeeccccCCCchhhhhcccCCCCCCCCCCCCCCccccccc
Q 003290 457 -------------ERAKVKVKVRLNMHGIVSIESATLLEEEEVEVPVTKEPEKEAAKMETDEVPSDAAPPSSSETDVNMQ 523 (833)
Q Consensus 457 -------------~~~~i~v~~~~d~~Gi~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 523 (833)
+.++|+|+|.+|.||+|+|++. |
T Consensus 86 G~f~l~gipp~p~G~~~IeVtf~iD~nGiL~VsA~-------------------------d------------------- 121 (182)
T 3n8e_A 86 GQFTLIGIPPAPRGVPQIEVTFDIDANGIVHVSAK-------------------------D------------------- 121 (182)
T ss_dssp EEEEECCCCCCCTTCSCEEEEEEECTTCCEEEEEE-------------------------E-------------------
T ss_pred EEEEEcCCCCCCCCCeeEEEEEEEecCCEEEEEEE-------------------------E-------------------
Confidence 5578999999999999999885 1
Q ss_pred cccCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCcccceeEeeeEeeccCCCCCHHHHHHHHHHHHHHhHhhHHHHH
Q 003290 524 DAKGTADAQGTTDAPGAENGVPESGDKPTQMETDKTPKKKVKKTNIPVSELVYGGMLPVDVQKAVEKEFEMALQDRVMEE 603 (833)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~i~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~ 603 (833)
+.++++..++|... ++|++++|++|++++++|+++|+..++
T Consensus 122 -------------------------------------~~tg~~~~i~I~~~--~~Ls~eei~~mi~~a~~~~~eD~~~~~ 162 (182)
T 3n8e_A 122 -------------------------------------KGTGREQQIVIQSS--GGLSKDDIENMVKNAEKYAEEDRRKKE 162 (182)
T ss_dssp -------------------------------------TTTCCEEEEEESCC--CCCCHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred -------------------------------------cCCCCEeeEEEecC--ccCCHHHHHHHHHHHHHHHHhHHHHHH
Confidence 23345567888766 489999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 003290 604 TKDRKNAVEAYVYDMRNKL 622 (833)
Q Consensus 604 ~~~akN~LEs~iy~~r~~L 622 (833)
+.++||+||+|+|++|++|
T Consensus 163 ~~e~kn~le~~iy~~~~~l 181 (182)
T 3n8e_A 163 RVEAVNMAEGIIHDTETKM 181 (182)
T ss_dssp HHHHHHHHHHHHHCCSCCC
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 9999999999999998765
No 21
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.79 E-value=2.2e-19 Score=191.15 Aligned_cols=187 Identities=17% Similarity=0.119 Sum_probs=126.3
Q ss_pred HcCCccEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEEEEeCCeEEEEEeeCCCCcccHHHHHHHHHH
Q 003290 162 IAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQH 241 (833)
Q Consensus 162 ~AGl~~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~d~~lGG~~~D~~l~~~ 241 (833)
+++..++..|||++|.++++.+.. +....|+|+|||+++++++. .++.+.+...++++..||.+|+..++++
T Consensus 68 ~a~~~~~~~Vne~~aha~a~~~~~-------~~~~~vl~lgG~~~~~~~~~-~~g~~~~~~~~~~~~~g~G~f~d~~a~~ 139 (276)
T 4ehu_A 68 MNYSDADKQISELSCHARGVNFII-------PETRTIIDIGGQDAKVLKLD-NNGRLLNFLMNDKCAAGTGRFLDVMAKI 139 (276)
T ss_dssp GGCCSCSEECCHHHHHHHHHHHHS-------TTCCEEEEECSSCEEEEEEC-TTSCEEEEEEECSCSTTSHHHHHHHHHH
T ss_pred HHhhCCCcccchHHHHHHHHHHhC-------CCCCeEEEEcCCCceEEEEE-ecCceEEEEeCCCcCcchhhHHHHHHHH
Confidence 467778899999999998876543 23457899999999999884 5678888888899999999999999988
Q ss_pred HHHHHHhhhccCccCCHHHHHHHHHHHHHHhhh--cCCCCceeEEEeccccCccceEEecHHHHHHHHHHHHHHHHHHHH
Q 003290 242 FAAKFKEEYKIDVSQNARASLRLRVACEKLKKV--LSANPEAPLNIECLMEEKDVRGFIKRDEFEQISAPILERVKRPLE 319 (833)
Q Consensus 242 l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~--LS~~~~~~~~ie~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~ 319 (833)
|.-.|.....+ +..++.. ++..... + ... + -....-.....++++..+++.+...+.
T Consensus 140 l~~~~~~~~~~---------------~~~a~~~~~i~~~~~~-f-~~s---~-~~~~~~~~~~~~di~a~~~~~v~~~l~ 198 (276)
T 4ehu_A 140 IEVDVSELGSI---------------SMNSQNEVSISSTCTV-F-AES---E-VISHLSENAKIEDIVAGIHTSVAKRVS 198 (276)
T ss_dssp HTCCGGGHHHH---------------HTTCSSCCCCCCCSHH-H-HHH---H-HHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred hccChhhhHHH---------------HhcCCCCCCcCCccch-h-hhh---H-HHHhhhccccHHHHHHHHHHHHHHHHH
Confidence 75433321110 1111110 0000000 0 000 0 000000011134566666666665555
Q ss_pred HHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHhCCCCCCCCCchhHHHhHHHHhchhhc
Q 003290 320 KALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILS 381 (833)
Q Consensus 320 ~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg~~~~~~~npdeava~Gaa~~aa~ls 381 (833)
....+. ..++.|+|+||.+++|.|++.|++.||.++..+.||++++|+|||++|....
T Consensus 199 ~~~~~~----~~~~~vvl~GGva~n~~lr~~l~~~~g~~~~~p~~p~~~~A~GAAl~A~~~~ 256 (276)
T 4ehu_A 199 SLVKRI----GVQRNVVMVGGVARNSGIVRAMAREINTEIIVPDIPQLTGALGAALYAFDEA 256 (276)
T ss_dssp HHHHHH----CCCSSEEEESGGGGCHHHHHHHHHHHTSCEECCSSGGGHHHHHHHHHHHHHH
T ss_pred HHHHhc----ccCCeEEEecCccchHHHHHHHHHHHCCCeeeCCCcchHHHHHHHHHHHHHH
Confidence 544443 3567899999999999999999999999999999999999999999987543
No 22
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.76 E-value=1.4e-19 Score=202.30 Aligned_cols=213 Identities=15% Similarity=0.161 Sum_probs=90.7
Q ss_pred CcEEEEecCccCHHHHHHHHHHH-HHcCCccEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEEEEeCC
Q 003290 138 VDCCIGIPVYFTDLQRRAVIDAA-TIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKG 216 (833)
Q Consensus 138 ~~~VITVP~~f~~~qR~al~~Aa-~~AGl~~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~ 216 (833)
..++||+|++++..+|+++.+++ +.+|++.+.++++|.||+++++. ...+|+|+|+|+|+++.+. .|
T Consensus 105 ~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~----------~~~lVVDiG~g~T~v~pv~--~G 172 (394)
T 1k8k_B 105 CKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGL----------LTGVVVDSGDGVTHICPVY--EG 172 (394)
T ss_dssp -----------------------------------------------------------CCEEEECSSCEEEECEE--TT
T ss_pred CcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCC----------ceEEEEEcCCCceEeeeeE--CC
Confidence 45999999999999999988864 88899999999999999988863 3569999999999998763 34
Q ss_pred eEEEEEeeCCCCcccHHHHHHHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCCC----------------c
Q 003290 217 QLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANP----------------E 280 (833)
Q Consensus 217 ~~~vl~~~~d~~lGG~~~D~~l~~~l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~~~----------------~ 280 (833)
.+ +........+||++||+.|.++|..+ .+....... +..++.+|+.+.... .
T Consensus 173 ~~-~~~~~~~~~~GG~~lt~~l~~~l~~~---~~~~~~~~~-------~~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~ 241 (394)
T 1k8k_B 173 FS-LPHLTRRLDIAGRDITRYLIKLLLLR---GYAFNHSAD-------FETVRMIKEKLCYVGYNIEQEQKLALETTVLV 241 (394)
T ss_dssp EE-CSTTCEEESCCHHHHHHHHHHHHHHT---TCCCCTTTT-------HHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTC
T ss_pred EE-cccceEEeeccHHHHHHHHHHHHHhc---CCCCCcHHH-------HHHHHHHHHhheeEecCHHHHHHhhccCCcCc
Confidence 33 22112346899999999999998754 122211111 145666666654321 1
Q ss_pred eeEEEeccccCccceEEecHHHHH---HHHHHH-----HHHHHHHHHHHHHHcCCC--CCCccEEEEeCCCCChHHHHHH
Q 003290 281 APLNIECLMEEKDVRGFIKRDEFE---QISAPI-----LERVKRPLEKALAETGLS--VEDVHMVEVVGSSSRVPAIIKI 350 (833)
Q Consensus 281 ~~~~ie~l~~~~d~~~~itr~efe---~l~~~~-----~~~i~~~i~~~l~~~~~~--~~~i~~ViLvGG~sriP~v~~~ 350 (833)
..+. +.++ ..+.|+++.|. -+++|. ...|...|.++|..+... ..-++.|+|+||+|++|.+.++
T Consensus 242 ~~~~---lpdg--~~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~r 316 (394)
T 1k8k_B 242 ESYT---LPDG--RIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSR 316 (394)
T ss_dssp EEEE---CTTS--CEEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHH
T ss_pred eEEE---CCCC--CEEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHH
Confidence 1121 2222 24667877773 223331 234778888888886432 2235789999999999999999
Q ss_pred HHHHhCC-----------------CC--CCCCCchhHHHhHHHHhch
Q 003290 351 LTEFFGK-----------------EP--RRTMNASECVARGCALQCA 378 (833)
Q Consensus 351 l~~~fg~-----------------~~--~~~~npdeava~Gaa~~aa 378 (833)
|.+.++. ++ ..+.++..++.+|++++|.
T Consensus 317 l~~el~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilas 363 (394)
T 1k8k_B 317 LERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLAD 363 (394)
T ss_dssp HHHHHHHHHHHHTCSSCCCTTCCCCC---------------------
T ss_pred HHHHHHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhC
Confidence 9887742 22 2245677899999999886
No 23
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.74 E-value=8e-18 Score=160.85 Aligned_cols=128 Identities=17% Similarity=0.315 Sum_probs=109.4
Q ss_pred EEeecccceEEEEcCCCCcccCcCCCCCceEeeecCCCCcCcceEEEEeecCc----eEEEEEEeccCc------c----
Q 003290 391 VNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGT----FTVDVQYADVSE------F---- 456 (833)
Q Consensus 391 ~~d~~~~~i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~~~~~~~------l---- 456 (833)
+.|++||+|||+|.++ .+.+||++|++||++++.+|++..| +.|.+|+|+... |
T Consensus 2 ~~Dv~p~slGi~~~gg------------~~~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~VyqGe~~~~~dn~~LG~f~ 69 (152)
T 3h0x_A 2 NADVNALTLGIETTGG------------VMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNNLLGKFE 69 (152)
T ss_dssp -CCBCSSCEEEEETTT------------EEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEE
T ss_pred ccceeccEEEEEEcCC------------EEEEEEECcCccCEEEEEEEEeCCCCcceeeeeEEEcCccccccCcEEEEEE
Confidence 6799999999999887 7899999999999999999998776 578888876432 1
Q ss_pred ---------ccceEEEEEEEcCCceEEEEeceeeeeeeeccccCCCchhhhhcccCCCCCCCCCCCCCCccccccccccC
Q 003290 457 ---------ERAKVKVKVRLNMHGIVSIESATLLEEEEVEVPVTKEPEKEAAKMETDEVPSDAAPPSSSETDVNMQDAKG 527 (833)
Q Consensus 457 ---------~~~~i~v~~~~d~~Gi~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 527 (833)
+.++|+|+|.+|.||+|+|++. |
T Consensus 70 l~gipp~p~G~~~I~Vtf~iD~nGiL~V~a~-------------------------d----------------------- 101 (152)
T 3h0x_A 70 LTGIPPAPRGVPQIEVTFALDANGILKVSAT-------------------------D----------------------- 101 (152)
T ss_dssp ECCCCCCCTTCSCEEEEEEECTTSEEEEEEE-------------------------E-----------------------
T ss_pred EeCCCCCCCCCceEEEEEEEcCCCEEEEEEE-------------------------E-----------------------
Confidence 5578999999999999999885 1
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCcccceeEeeeEeeccCCCCCHHHHHHHHHHHHHHhHhhHHHHHHHHH
Q 003290 528 TADAQGTTDAPGAENGVPESGDKPTQMETDKTPKKKVKKTNIPVSELVYGGMLPVDVQKAVEKEFEMALQDRVMEETKDR 607 (833)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~i~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~a 607 (833)
+.++++..++|.... +.|++++|++|++++++|+++|+..+++.++
T Consensus 102 ---------------------------------~~tg~~~~i~I~~~~-~~ls~~ei~~~~~~a~~~~~~D~~~~~~~~~ 147 (152)
T 3h0x_A 102 ---------------------------------KGTGKSESITITNDK-GRLTQEEIDRMVEEAEKFASEDASIKAKVES 147 (152)
T ss_dssp ---------------------------------TTTCCEEEEEEECCT-TCCCHHHHHHHHHHHHHTHHHHHHHHHHHHC
T ss_pred ---------------------------------cCCCcEeEEEEecCC-CCCCHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 334456688888664 4799999999999999999999999999999
Q ss_pred HHHHH
Q 003290 608 KNAVE 612 (833)
Q Consensus 608 kN~LE 612 (833)
||+||
T Consensus 148 ~n~le 152 (152)
T 3h0x_A 148 RNKLE 152 (152)
T ss_dssp SCCCC
T ss_pred HhhcC
Confidence 99986
No 24
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.72 E-value=1.1e-17 Score=159.63 Aligned_cols=128 Identities=18% Similarity=0.325 Sum_probs=105.2
Q ss_pred EEeecccceEEEEcCCCCcccCcCCCCCceEeeecCCCCcCcceEEEEeecCc----eEEEEEEeccCc------c----
Q 003290 391 VNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGT----FTVDVQYADVSE------F---- 456 (833)
Q Consensus 391 ~~d~~~~~i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~~~~~~~------l---- 456 (833)
+.|++||+|||+|.++ .+.+||++|++||++++.+|++..| +.|.+|+|+... |
T Consensus 2 ~~Dv~p~slGie~~gg------------~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~LG~f~ 69 (152)
T 3dob_A 2 NADVAPLSLGIETAGG------------VMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFE 69 (152)
T ss_dssp --CBCSSCEEEEETTT------------EEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEE
T ss_pred ceeeecceEEEEEcCC------------EEEEEEECcCccCEEEEEEEEECCCCceEEEEEEEEcCccccccCceeEEEE
Confidence 6799999999999887 7999999999999999999999877 468888875432 1
Q ss_pred ---------ccceEEEEEEEcCCceEEEEeceeeeeeeeccccCCCchhhhhcccCCCCCCCCCCCCCCccccccccccC
Q 003290 457 ---------ERAKVKVKVRLNMHGIVSIESATLLEEEEVEVPVTKEPEKEAAKMETDEVPSDAAPPSSSETDVNMQDAKG 527 (833)
Q Consensus 457 ---------~~~~i~v~~~~d~~Gi~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 527 (833)
+.+.|+|+|.+|.||+|+|++. |
T Consensus 70 l~gipp~p~G~~~IeVtf~iD~nGiL~Vsa~-------------------------d----------------------- 101 (152)
T 3dob_A 70 LSGIPPAPRGVPQIEVTFNIDANGILNVSAE-------------------------D----------------------- 101 (152)
T ss_dssp EECCCCCCTTCCCEEEEEEECTTCCEEEEEE-------------------------E-----------------------
T ss_pred EeCCCCCCCCCceEEEEEEeCCCCeEEEEEE-------------------------E-----------------------
Confidence 5578999999999999999885 1
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCcccceeEeeeEeeccCCCCCHHHHHHHHHHHHHHhHhhHHHHHHHHH
Q 003290 528 TADAQGTTDAPGAENGVPESGDKPTQMETDKTPKKKVKKTNIPVSELVYGGMLPVDVQKAVEKEFEMALQDRVMEETKDR 607 (833)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~i~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~a 607 (833)
+.++++..++|.... +.||+++|++|++++++++++|+..+++.++
T Consensus 102 ---------------------------------~~tg~~~~i~I~~~~-~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~ 147 (152)
T 3dob_A 102 ---------------------------------KSTGKSNRITIQNEK-GRLTQSDIDRMVHEAKQFEKEDGEQRERVQA 147 (152)
T ss_dssp ---------------------------------TTTCCEEEEEECCC-----CHHHHHHHHHHHHHTHHHHHHHHHTCCC
T ss_pred ---------------------------------cCCCCEEEEEEEcCC-CCCCHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 334456678887654 4699999999999999999999999999999
Q ss_pred HHHHH
Q 003290 608 KNAVE 612 (833)
Q Consensus 608 kN~LE 612 (833)
||+||
T Consensus 148 ~n~le 152 (152)
T 3dob_A 148 RNQLE 152 (152)
T ss_dssp CSEEC
T ss_pred HhhcC
Confidence 99875
No 25
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.70 E-value=1.2e-17 Score=159.28 Aligned_cols=127 Identities=19% Similarity=0.312 Sum_probs=107.3
Q ss_pred EEeecccceEEEEcCCCCcccCcCCCCCceEeeecCCCCcCcceEEEEeecCc----eEEEEEEeccCc------c----
Q 003290 391 VNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGT----FTVDVQYADVSE------F---- 456 (833)
Q Consensus 391 ~~d~~~~~i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~~~~~~~------l---- 456 (833)
+.|++||+|||+|.++ .+.+||++|++||++++.+|++..| +.|.+|+|+... |
T Consensus 2 ~~DV~p~slGie~~gg------------~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~VyqGe~~~~~dn~~LG~f~ 69 (151)
T 3dqg_A 2 NADVTPLSLGIETLGG------------IMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFS 69 (151)
T ss_dssp --CBCSSCEEEEETTT------------EEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEE
T ss_pred cceeeeeEEEEEEcCC------------EEEEEEECcCccCEEEEEEEEECCCCcceEEEEEEEcCCcccccCcEEEEEE
Confidence 6799999999999987 7999999999999999999999876 778888875432 1
Q ss_pred ---------ccceEEEEEEEcCCceEEEEeceeeeeeeeccccCCCchhhhhcccCCCCCCCCCCCCCCccccccccccC
Q 003290 457 ---------ERAKVKVKVRLNMHGIVSIESATLLEEEEVEVPVTKEPEKEAAKMETDEVPSDAAPPSSSETDVNMQDAKG 527 (833)
Q Consensus 457 ---------~~~~i~v~~~~d~~Gi~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 527 (833)
+.++|+|+|.+|.||+|+|++. |
T Consensus 70 l~gipp~p~G~~~IeVtf~iD~nGiL~Vsa~-------------------------d----------------------- 101 (151)
T 3dqg_A 70 LVGIPPAPRGVPQVEVTFDIDANGIVNVSAR-------------------------D----------------------- 101 (151)
T ss_dssp EECCCCCCTTCSCEEEEEEECTTSEEEEEEE-------------------------E-----------------------
T ss_pred EeCCCCCCCCCcEEEEEEEeccCcEEEEEEE-------------------------E-----------------------
Confidence 5578999999999999999885 1
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCcccceeEeeeEeeccCCCCCHHHHHHHHHHHHHHhHhhHHHHHHHHH
Q 003290 528 TADAQGTTDAPGAENGVPESGDKPTQMETDKTPKKKVKKTNIPVSELVYGGMLPVDVQKAVEKEFEMALQDRVMEETKDR 607 (833)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~i~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~a 607 (833)
+.++++..++|... +.|++++|++|++++++|+++|+..+++.++
T Consensus 102 ---------------------------------~~tg~~~~i~I~~~--~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~ 146 (151)
T 3dqg_A 102 ---------------------------------RGTGKEQQIVIQSS--GGLSKDQIENMIKEAEKNAAEDAKRKELVEV 146 (151)
T ss_dssp ---------------------------------TTTCCEEEEEEECS--SSSCHHHHHHHHHHHHHHHHHHTTCCCEEEC
T ss_pred ---------------------------------ccCCCEeEEEEecC--CCCCHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 33345667888766 4899999999999999999999999999999
Q ss_pred HHHHH
Q 003290 608 KNAVE 612 (833)
Q Consensus 608 kN~LE 612 (833)
||+||
T Consensus 147 ~n~~e 151 (151)
T 3dqg_A 147 INQAE 151 (151)
T ss_dssp BCCCC
T ss_pred HhhcC
Confidence 99875
No 26
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.68 E-value=1e-16 Score=175.88 Aligned_cols=208 Identities=15% Similarity=0.173 Sum_probs=140.7
Q ss_pred CcEEEEecCccCHHHH-HHHHHHHHHcCC------------ccEEeechhHHHHHHHhhhcCCCCCC---CCceEEEEEe
Q 003290 138 VDCCIGIPVYFTDLQR-RAVIDAATIAGL------------HPLRLFHETTATALAYGIYKTDLPEN---DQLNVAFVDI 201 (833)
Q Consensus 138 ~~~VITVP~~f~~~qR-~al~~Aa~~AGl------------~~~~li~EptAaAl~y~~~~~~~~~~---~~~~vlv~D~ 201 (833)
..+|+.+|..+...+| +++++++...+- ..+.++.||.||+++|++... +.. .+..++|+|+
T Consensus 114 ~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~--~~~~~~~~~~~~vvDi 191 (355)
T 3js6_A 114 VVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENG--KVFKAFTEGKYSVLDF 191 (355)
T ss_dssp EEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETT--EECHHHHTCEEEEEEE
T ss_pred EEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccC--ccccccccCcEEEEEe
Confidence 3799999999998887 589998875543 467899999999999875431 100 2678999999
Q ss_pred CCceEEEEEEEEeCCeEEEEEeeCCCCcccHHHHHHHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCCCce
Q 003290 202 GHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEA 281 (833)
Q Consensus 202 Gggt~dvsvv~~~~~~~~vl~~~~d~~lGG~~~D~~l~~~l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~ 281 (833)
||||||++++ .++.+ +...++...+||..+++.|.+++.+++. +..+. .. ..++.+.
T Consensus 192 GggTtd~~v~--~~~~~-~~~~s~s~~~G~~~~~~~i~~~l~~~~~---g~~l~--~~-------~i~~g~~-------- 248 (355)
T 3js6_A 192 GSGTTIIDTY--QNMKR-VEEESFVINKGTIDFYKRIASHVSKKSE---GASIT--PR-------MIEKGLE-------- 248 (355)
T ss_dssp CSSCEEEEEE--ETTEE-CGGGCEEESCCHHHHHHHHHHHTC-----------C--HH-------HHHSCCC--------
T ss_pred CCCcEEEEEE--cCCEE-ccccccCcchHHHHHHHHHHHHHHHhcC---CCcCC--HH-------HHhcCCc--------
Confidence 9999999998 34433 2222335679999999999999876531 22222 11 1111111
Q ss_pred eEEEeccccCccceEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHH--HHHHHHHHhCCCC
Q 003290 282 PLNIECLMEEKDVRGFIKRDEFEQISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPA--IIKILTEFFGKEP 359 (833)
Q Consensus 282 ~~~ie~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~--v~~~l~~~fg~~~ 359 (833)
+.... .+..-.+.+ .+.+++.+++++++|...|++.+.+ ++.++.|+|+||++.++. |.+.|++.|+..
T Consensus 249 -~~~~~--~~~~k~~di-~~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~~~i~~~~~~~- 319 (355)
T 3js6_A 249 -YKQCK--LNQKTVIDF-KDEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLSHYYSDVFEKA- 319 (355)
T ss_dssp ----------------C-HHHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHHHHSSSCEECC-
T ss_pred -ccccc--ccccccccH-HHHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHHHHHHHHCCCC-
Confidence 00000 000000112 3457777888888888888877753 466899999999999998 889999888542
Q ss_pred CCCCCchhHHHhHHHHhchhhcC
Q 003290 360 RRTMNASECVARGCALQCAILSP 382 (833)
Q Consensus 360 ~~~~npdeava~Gaa~~aa~ls~ 382 (833)
.||..|+|+|+..++..+..
T Consensus 320 ---~~p~~anA~G~~~~~~~~~~ 339 (355)
T 3js6_A 320 ---DDSQFSNVRGYEKLGELLKN 339 (355)
T ss_dssp ---SSGGGHHHHHHHHHHHHHHH
T ss_pred ---CCcHHHHHHHHHHHHHHHHh
Confidence 89999999999999887653
No 27
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.67 E-value=1.4e-16 Score=153.01 Aligned_cols=128 Identities=16% Similarity=0.337 Sum_probs=107.2
Q ss_pred EEeecccceEEEEcCCCCcccCcCCCCCceEeeecCCCCcCcceEEEEeecCc----eEEEEEEeccCc------c----
Q 003290 391 VNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGT----FTVDVQYADVSE------F---- 456 (833)
Q Consensus 391 ~~d~~~~~i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~~~~~~~------l---- 456 (833)
+.|++||+|||+|.++ .+.+||++|++||++++.+|++..| +.|.+|||+... |
T Consensus 2 v~Dv~p~slGi~~~~g------------~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~lg~~~ 69 (152)
T 2op6_A 2 NADVNPLTLGIETVGG------------VMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNFD 69 (152)
T ss_dssp -CCBCSSCEEEEETTT------------EEEEEECTTCBSSEEEEEEEEESSTTCCCEEEEEEESSCSBGGGSEEEEEEE
T ss_pred ceEeecccEEEEEeCC------------EEEEEEeCCCcccEeEEEEEEeCCCCCcEEEEEEEEeCCccCccCCEeEEEE
Confidence 5799999999999876 7999999999999999999998776 889999986421 1
Q ss_pred ---------ccceEEEEEEEcCCceEEEEeceeeeeeeeccccCCCchhhhhcccCCCCCCCCCCCCCCccccccccccC
Q 003290 457 ---------ERAKVKVKVRLNMHGIVSIESATLLEEEEVEVPVTKEPEKEAAKMETDEVPSDAAPPSSSETDVNMQDAKG 527 (833)
Q Consensus 457 ---------~~~~i~v~~~~d~~Gi~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 527 (833)
+.++|+|+|.+|.||+|+|++. |
T Consensus 70 l~gipp~p~G~~~I~V~f~id~nGiL~V~a~-------------------------d----------------------- 101 (152)
T 2op6_A 70 VTGIPPAPRGVPQIEVTFEIDVNGILHVSAE-------------------------D----------------------- 101 (152)
T ss_dssp ECCCCCCCTTCSCEEEEEEECTTSCEEEEEE-------------------------E-----------------------
T ss_pred EECCCCCCCCCceEEEEEEECCCcEEEEEEE-------------------------E-----------------------
Confidence 4568999999999999999885 0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCcccceeEeeeEeeccCCCCCHHHHHHHHHHHHHHhHhhHHHHHHHHH
Q 003290 528 TADAQGTTDAPGAENGVPESGDKPTQMETDKTPKKKVKKTNIPVSELVYGGMLPVDVQKAVEKEFEMALQDRVMEETKDR 607 (833)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~i~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~a 607 (833)
+.++++..++|.... ++|+.+++++|++++.+|+.+|+..+++.++
T Consensus 102 ---------------------------------~~tg~~~~i~i~~~~-~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~ 147 (152)
T 2op6_A 102 ---------------------------------KGTGNKNKLTITNDH-NRLSPEDIERMINDADKFAADDQAQKEKVES 147 (152)
T ss_dssp ---------------------------------TTTCCEEEEEECSSS-SCCCHHHHHHHHHHHHHTHHHHHHHHHHSCC
T ss_pred ---------------------------------ecCCcEEEEEeeccc-cCCCHHHHHHHHHHHHHhHhccHHHHHHHHH
Confidence 112234567776553 5799999999999999999999999999999
Q ss_pred HHHHH
Q 003290 608 KNAVE 612 (833)
Q Consensus 608 kN~LE 612 (833)
||+||
T Consensus 148 kn~~e 152 (152)
T 2op6_A 148 RNELE 152 (152)
T ss_dssp CSEEC
T ss_pred HhhcC
Confidence 99875
No 28
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.57 E-value=1.1e-15 Score=166.24 Aligned_cols=204 Identities=10% Similarity=0.115 Sum_probs=143.4
Q ss_pred CcEEEEecCccCH--HHHHHHHHHHHH---c-----C------CccEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEe
Q 003290 138 VDCCIGIPVYFTD--LQRRAVIDAATI---A-----G------LHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDI 201 (833)
Q Consensus 138 ~~~VITVP~~f~~--~qR~al~~Aa~~---A-----G------l~~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~ 201 (833)
..+|+++|..+.. .+|+.+++.... . | +..+.++.|+.+|.+.+. ... ....++|+|+
T Consensus 106 v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~---~~~---~~~~v~vvDi 179 (329)
T 4apw_A 106 VQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQ---ENF---KNKNVAVIDF 179 (329)
T ss_dssp EEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSC---CCC---TTCEEEEEEE
T ss_pred EEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcc---hhh---ccCCEEEEEe
Confidence 4789999998774 367778777652 1 1 234678888888776542 111 3678999999
Q ss_pred CCceEEEEEEEEeCCeEEEEEeeCCCCcccHHHHHHHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCCCce
Q 003290 202 GHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEA 281 (833)
Q Consensus 202 Gggt~dvsvv~~~~~~~~vl~~~~d~~lGG~~~D~~l~~~l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~ 281 (833)
||||||++++. .+.+ +....+...+||.++++.|++++.. .+|++.+.. ..++++|+. ...
T Consensus 180 GggTtd~~v~~--~g~~-~~~~~~~~~~G~~~~~~~i~~~l~~---~~~g~~i~~---------~~~e~i~~~----g~~ 240 (329)
T 4apw_A 180 GGLNMGFSLYR--NCVV-NPSERFIEEHGVKDLIIRVGDALTD---LNNGNLITN---------EQAESALNN----GYM 240 (329)
T ss_dssp CSSCEEEEEEE--TTEE-CGGGCEEESCCHHHHHHHHHTSSSS---CSSCSCTTS---------BTTTTCSSS----CSS
T ss_pred CCCcEEEEEEE--CCEE-eeccccchhhHHHHHHHHHHHHHHh---hccCCCCCH---------HHHHHHHhc----CCc
Confidence 99999999977 4444 3333345789999999999987654 045555543 234444442 111
Q ss_pred eEEEeccccCccceEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHhCCCCCC
Q 003290 282 PLNIECLMEEKDVRGFIKRDEFEQISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRR 361 (833)
Q Consensus 282 ~~~ie~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg~~~~~ 361 (833)
..+.++ ..+..+.+++.++++++.|...|++. +..++.++.|+|+||++.+ +.+.|++.|+.++..
T Consensus 241 -------~~g~~~-~~~~~~~i~~~~~e~~~~I~~~i~~~----~~~~~~~~~IvltGGGA~l--~~~~l~~~~~~~v~v 306 (329)
T 4apw_A 241 -------KKGGEI-DTESSTVIKKVKEKFLKDAIKLIEKR----GFKLDQLDSLIFIGGTTQK--LKEQISKTYPNNSII 306 (329)
T ss_dssp -------CEECTT-CCSTTHHHHHHHHHHHHHHHHHHHHH----TCCTTSCSEEEEESTTHHH--HHHHHHHHSTTCEEC
T ss_pred -------ccCCcc-hhHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHccEEEEECChHHH--HHHHHHHHcCCCCEe
Confidence 011122 13567788888888888888777765 3455568999999999998 569999999977778
Q ss_pred CCCchhHHHhHHHHhchhh
Q 003290 362 TMNASECVARGCALQCAIL 380 (833)
Q Consensus 362 ~~npdeava~Gaa~~aa~l 380 (833)
..||..|+|+|+..++.+.
T Consensus 307 ~~~P~~a~a~G~~~~~~~k 325 (329)
T 4apw_A 307 TNNSQWTTCEGLYKVAVAK 325 (329)
T ss_dssp CSSGGGHHHHHHHHHHHHH
T ss_pred cCCChhhHHHHHHHHHhhh
Confidence 8899999999999877543
No 29
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.37 E-value=1.1e-12 Score=146.97 Aligned_cols=223 Identities=13% Similarity=0.056 Sum_probs=140.2
Q ss_pred CcEEEEecCccCHHHHHHHHHHH-HHcCCccEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEEEEeCC
Q 003290 138 VDCCIGIPVYFTDLQRRAVIDAA-TIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKG 216 (833)
Q Consensus 138 ~~~VITVP~~f~~~qR~al~~Aa-~~AGl~~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~ 216 (833)
..++||.|+..+...|+.+.+.+ +.+|++.+.++.++.+|+++.+.... .. ....+-||+|+|+|+|+++.+ +. |
T Consensus 124 ~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~-~~-~~~~tglVVDiG~g~T~v~PV-~~-G 199 (427)
T 3dwl_A 124 HYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSK-VT-DRSLTGTVVDSGDGVTHIIPV-AE-G 199 (427)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTT-TC-SCCCCEEEEEESSSCEEEEEE-ET-T
T ss_pred CcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCccc-cc-CCCceEEEEECCCCceEEEEE-EC-C
Confidence 47999999999999999998887 78999999999999999987764321 00 013568999999999999997 33 3
Q ss_pred eEEEEEeeCCCCcccHHHHHHHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCCCce-----------eEEE
Q 003290 217 QLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEA-----------PLNI 285 (833)
Q Consensus 217 ~~~vl~~~~d~~lGG~~~D~~l~~~l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~-----------~~~i 285 (833)
.. +........+||+++|..|.++|..+... ... +..++.+|+.+...... ...+
T Consensus 200 ~~-l~~~~~rl~~gG~~lt~~L~~lL~~~~~~----~~~---------~~~~~~IKe~~cyv~~d~~~e~~~~~~~~~~~ 265 (427)
T 3dwl_A 200 YV-IGSSIKTMPLAGRDVTYFVQSLLRDRNEP----DSS---------LKTAERIKEECCYVCPDIVKEFSRFDREPDRY 265 (427)
T ss_dssp EE-CGGGCEEESCCHHHHHHHHHHTTC---------------------CHHHHHHHHHHCCCCSCHHHHHHHTTC-----
T ss_pred EE-ehhhheeccccHHHHHHHHHHHHHHcCCC----chh---------HHHHHHHHHhcCcccCCHHHHHHHhhcCcccc
Confidence 22 11111124799999999999887654321 000 14566666665432110 0001
Q ss_pred ec--c--ccCccceEEecHHHH---HHHHHHH------HHHHHHHHHHHHHHcCCCC--CCccEEEEeCCCCChHHHHHH
Q 003290 286 EC--L--MEEKDVRGFIKRDEF---EQISAPI------LERVKRPLEKALAETGLSV--EDVHMVEVVGSSSRVPAIIKI 350 (833)
Q Consensus 286 e~--l--~~~~d~~~~itr~ef---e~l~~~~------~~~i~~~i~~~l~~~~~~~--~~i~~ViLvGG~sriP~v~~~ 350 (833)
.. + .++....+.|..+.| |-+++|- ...|.+.|.++|..+.... .-...|+|+||+|.+|.+.++
T Consensus 266 ~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~dlr~~L~~nIvLtGG~sl~~G~~~R 345 (427)
T 3dwl_A 266 LKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNR 345 (427)
T ss_dssp CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCHHHHHHHHHCEEEESGGGCSTTTTHH
T ss_pred ceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCHHHHHHHhCCEEEEccCcCCCChHHH
Confidence 00 1 223334566777766 2333441 2347777777777653211 113579999999999999988
Q ss_pred HHHHhC----------------------CCCCCCCCchhHHHhHHHHhch
Q 003290 351 LTEFFG----------------------KEPRRTMNASECVARGCALQCA 378 (833)
Q Consensus 351 l~~~fg----------------------~~~~~~~npdeava~Gaa~~aa 378 (833)
|.+.+. .++..+.++..++=+|++++|.
T Consensus 346 L~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilas 395 (427)
T 3dwl_A 346 LQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQ 395 (427)
T ss_dssp HHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeecc
Confidence 887551 1123345677899999999985
No 30
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.35 E-value=1.1e-11 Score=140.55 Aligned_cols=178 Identities=14% Similarity=0.104 Sum_probs=115.9
Q ss_pred eEEEEEcCccceEEEEEECCceEEEcCCCCCccceEEEEEcC----CceEecHhhhhhhccCCCchHHHHHHhhCCCCCC
Q 003290 2 SVVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFGD----KQRFIGTAGAASSTMNPKNSISQIKRLIGRQFSD 77 (833)
Q Consensus 2 ~viGID~GTt~s~va~~~~~~~~ii~n~~~~r~tPs~V~~~~----~~~~~G~~A~~~~~~~p~~~~~~~k~llG~~~~~ 77 (833)
..|+||+||.++++++...+.+.+ .+||+|+... ...+||++|.... + .+ +
T Consensus 24 ~~iVID~GS~~~kaG~ag~~~P~~--------v~PSvVg~~~~~~~~~~~vG~e~~~~~-r--~~--------l------ 78 (498)
T 3qb0_A 24 SAVVIDPGSYTTNIGYSGSDFPQS--------ILPSVYGKYTADEGNKKIFSEQSIGIP-R--KD--------Y------ 78 (498)
T ss_dssp SCEEEECCSSEEEEEETTCSSCSE--------EEESEEEEESSCSSCCEECCTTGGGSC-C--TT--------E------
T ss_pred CeEEEECCCcEEEEEECCCCCeee--------ecCceeEEeccCCCccEEEecHHHhcC-c--Cc--------e------
Confidence 468999999999999865443222 2499999853 2357887642210 0 00 0
Q ss_pred HHHHHhhccCCceeeeCCCCceEEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHhcCC--CcC-cEEEEecCccCHHHHH
Q 003290 78 PELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNA--AVV-DCCIGIPVYFTDLQRR 154 (833)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~ae~~~~~--~~~-~~VITVP~~f~~~qR~ 154 (833)
.-.+|+ .+|.+ .. =+.+..+++|+.. ..++. .-. .++||.|+......|+
T Consensus 79 ------~l~~Pi-----~~GvI------------~d-wd~~E~iw~~~f~---~~L~v~p~~~~pvlltep~~n~~~~Re 131 (498)
T 3qb0_A 79 ------ELKPII-----ENGLV------------ID-WDTAQEQWQWALQ---NELYLNSNSGIPALLTEPVWNSTENRK 131 (498)
T ss_dssp ------EEEESE-----ETTEE------------SC-HHHHHHHHHHHHH---HTSCCSCCTTCCEEEEECTTCCHHHHH
T ss_pred ------EEeccC-----cCCEE------------cc-HHHHHHHHHHHHH---hhhCCCcccCCceEEEeCCCCcHHHHH
Confidence 001121 12321 11 2334455555543 22332 123 6999999999999999
Q ss_pred HHHHHH-HHcCCccEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEEEEeCCeEEEEEeeCCCCcccHH
Q 003290 155 AVIDAA-TIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRD 233 (833)
Q Consensus 155 al~~Aa-~~AGl~~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~d~~lGG~~ 233 (833)
.|.+.+ +.+|++.+.++.++.+|++++|. ..-||+|+|+|+|+++.+. .|.. +........+||++
T Consensus 132 ~~~eilFE~f~vpav~l~~~~vlalya~G~----------~tglVVDiG~g~T~vvPI~--~G~~-l~~ai~rl~vgG~~ 198 (498)
T 3qb0_A 132 KSLEVLLEGMQFEACYLAPTSTCVSFAAGR----------PNCLVVDIGHDTCSVSPIV--DGMT-LSKSTRRNFIAGKF 198 (498)
T ss_dssp HHHHHHHTTSCCSEEEEEEHHHHHHHHHTC----------SSEEEEEECSSCEEEEEEE--TTEE-CGGGCEEESCSHHH
T ss_pred HHHHHHHhhcCCCeEeecchHHHHHHHcCC----------CeEEEEEcCCCcEEEEEEe--CCEE-ccccceeccccHHH
Confidence 998864 88999999999999999987763 1349999999999999874 3322 11111135799999
Q ss_pred HHHHHHHHHHH
Q 003290 234 FDEVLFQHFAA 244 (833)
Q Consensus 234 ~D~~l~~~l~~ 244 (833)
+|..|.++|..
T Consensus 199 lt~~L~~lL~~ 209 (498)
T 3qb0_A 199 INHLIKKALEP 209 (498)
T ss_dssp HHHHHHHHTTT
T ss_pred HHHHHHHHHHh
Confidence 99999999864
No 31
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=99.24 E-value=2.7e-11 Score=109.85 Aligned_cols=82 Identities=23% Similarity=0.364 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-hhhccCCHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhccchHHHH
Q 003290 600 VMEETKDRKNAVEAYVYDMRNKLCD-KYQDFVTDSERELFTSKLQETEDWLYEDGEDETKGVYVAKLEELKKQGDPIEER 678 (833)
Q Consensus 600 ~~~~~~~akN~LEs~iy~~r~~L~~-~~~~~~~~~er~~i~~~l~e~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~R 678 (833)
.+|++.++||.||+|||++|..|.+ .|..++++++++.|...|+++++||+.+ .+++.++|+.++++|+.++.||..|
T Consensus 3 ~~re~ieakN~lEs~iy~~e~~l~e~~~~~kl~~eek~~i~~~i~e~~~wL~~~-~~a~~e~i~~k~~eL~~~~~~i~~k 81 (113)
T 3lof_A 3 AAAERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDAN-TLAEKDEFEHKRKELEQVCNPIISG 81 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCGGGBTTBCHHHHHHHHHHHHHHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcC-CcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4788999999999999999999974 5889999999999999999999999985 7789999999999999999999999
Q ss_pred HHhh
Q 003290 679 YKEF 682 (833)
Q Consensus 679 ~~e~ 682 (833)
++..
T Consensus 82 ~y~~ 85 (113)
T 3lof_A 82 LYQG 85 (113)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 8864
No 32
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=99.15 E-value=1.2e-09 Score=128.62 Aligned_cols=103 Identities=16% Similarity=0.333 Sum_probs=77.9
Q ss_pred HHhcCCCcC-----cEEEEecCccCHHHHHHHHHH-HHHcCCccEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCC
Q 003290 130 ESNLNAAVV-----DCCIGIPVYFTDLQRRAVIDA-ATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGH 203 (833)
Q Consensus 130 e~~~~~~~~-----~~VITVP~~f~~~qR~al~~A-a~~AGl~~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gg 203 (833)
...++.... .+++|.|..|+...|+.|.+. .+..|+..+.++.++.+|++++|. .+-||+|+|+
T Consensus 186 ~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~----------~tglVVDiG~ 255 (593)
T 4fo0_A 186 QKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGL----------SSTCIVDVGD 255 (593)
T ss_dssp HHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTC----------SEEEEEEECS
T ss_pred HHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCC----------CceEEEEeCC
Confidence 345665443 499999999999999888776 477899999999999999887763 3569999999
Q ss_pred ceEEEEEEEEeCCeEEEEEeeCCCCcccHHHHHHHHHHHHHH
Q 003290 204 ASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAK 245 (833)
Q Consensus 204 gt~dvsvv~~~~~~~~vl~~~~d~~lGG~~~D~~l~~~l~~~ 245 (833)
+.|.|+-|. +|.. +....-...+||++++..|.++|...
T Consensus 256 ~~T~v~PV~--dG~~-l~~~~~rl~~GG~~lt~~L~~lL~~~ 294 (593)
T 4fo0_A 256 QKTSVCCVE--DGVS-HRNTRLCLAYGGSDVSRCFYWLMQRA 294 (593)
T ss_dssp SCEEEEEEE--SSCB-CGGGCEEESCCHHHHHHHHHHHHHHT
T ss_pred CceeeeeeE--CCEE-ehhheEEecccHHHHHHHHHHHHHhc
Confidence 999988753 3322 11111234699999999999888753
No 33
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=99.15 E-value=3.5e-11 Score=132.86 Aligned_cols=195 Identities=17% Similarity=0.178 Sum_probs=128.1
Q ss_pred HHHHHHHHHHHc-CC--ccEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEEEEeCCeEEEEEeeCCCC
Q 003290 152 QRRAVIDAATIA-GL--HPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRS 228 (833)
Q Consensus 152 qR~al~~Aa~~A-Gl--~~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~d~~ 228 (833)
+-+.+.++.+.+ || .+-. .||.||+++...... .+..++++||||||||++++ .++.+.... ...
T Consensus 369 ~m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeDE-----~eLGvaiIDmGGGTTd~sVf--~~G~lv~a~---~ip 436 (610)
T 2d0o_A 369 QMAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTPG-----TTRPLAILDLGAGSTDASII--NPKGDIIAT---HLA 436 (610)
T ss_dssp CHHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTSTT-----CCSSEEEEEECSSEEEEEEE--CTTCCEEEE---EEE
T ss_pred HHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC-----CcCCeEEEEeCCCcceEEEE--cCCcEEEEE---Eec
Confidence 457788899999 99 6666 899999987754321 35779999999999999995 454442222 257
Q ss_pred cccHHHHHHHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCC----------CCceeEEE--eccc----cC-
Q 003290 229 VGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSA----------NPEAPLNI--ECLM----EE- 291 (833)
Q Consensus 229 lGG~~~D~~l~~~l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~----------~~~~~~~i--e~l~----~~- 291 (833)
.||++++..|..-|. +++ +..||++|. +.. .....+.+ +.+. ..
T Consensus 437 ~gG~~VT~DIA~~Lg----------t~d--------~~~AErIK~-YG~A~ve~lf~~~dede~Iev~~~~lgp~~~~Rv 497 (610)
T 2d0o_A 437 GAGDMVTMIIARELG----------LED--------RYLAEEIKK-YPLAKVESLFHLRHEDGSVQFFSTPLPPAVFARV 497 (610)
T ss_dssp CSHHHHHHHHHHHHT----------CCC--------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTCE
T ss_pred cchHHHHHHHHHHhC----------CCC--------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeeee
Confidence 999999999976543 221 267999998 521 12223444 2221 11
Q ss_pred ----ccceEEecHHH--HHHHHHHHHHHHHHH--HHHHHHHcCC-----CCCCccEEEEeCCCCChHHHHHHHHHHhCC-
Q 003290 292 ----KDVRGFIKRDE--FEQISAPILERVKRP--LEKALAETGL-----SVEDVHMVEVVGSSSRVPAIIKILTEFFGK- 357 (833)
Q Consensus 292 ----~d~~~~itr~e--fe~l~~~~~~~i~~~--i~~~l~~~~~-----~~~~i~~ViLvGG~sriP~v~~~l~~~fg~- 357 (833)
.+--..| +.. +|+ ++-+-+++.+. +..+|+..+. +..+|..|+|+||+|.++.+.++..+.|+.
T Consensus 498 ~~~~~~~L~~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~y 575 (610)
T 2d0o_A 498 CVVKADELVPL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHY 575 (610)
T ss_dssp EEECSSCEEEC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTTS
T ss_pred ecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCcC
Confidence 0111234 444 555 44444443332 2333554322 356789999999999999999999999986
Q ss_pred CC-------CCCCCchhHHHhHHHHhchh
Q 003290 358 EP-------RRTMNASECVARGCALQCAI 379 (833)
Q Consensus 358 ~~-------~~~~npdeava~Gaa~~aa~ 379 (833)
++ ...-+|..|+|.|.+++.+.
T Consensus 576 ~VRiGrP~~~gv~gP~fAtAvGLlly~~~ 604 (610)
T 2d0o_A 576 RLVAGRGNIRGSEGPRNAVATGLILSWHK 604 (610)
T ss_dssp SCEEEECCGGGTSTTSCHHHHHHHHHHHH
T ss_pred CeEEecCCccccCCCcHHHHHHHHHHHhh
Confidence 43 22448999999999987643
No 34
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=99.12 E-value=5.3e-11 Score=131.95 Aligned_cols=192 Identities=17% Similarity=0.139 Sum_probs=125.6
Q ss_pred HHHHHHHHHHc-CC--ccEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEEEEeCCeEEEEEeeCCCCc
Q 003290 153 RRAVIDAATIA-GL--HPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSV 229 (833)
Q Consensus 153 R~al~~Aa~~A-Gl--~~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~d~~l 229 (833)
-+.+..+.+.+ || .+-. .||.||+++...... .+..++++||||||||++++ .++.+.... ....
T Consensus 372 m~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTedE-----~elGvaiIDmGgGTTd~sVf--~~g~lv~a~---~ip~ 439 (607)
T 1nbw_A 372 MQVIARELSARLQTEVVVGG--VEANMAIAGALTTPG-----CAAPLAILDLGAGSTDAAIV--NAEGQITAV---HLAG 439 (607)
T ss_dssp SCCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTSTT-----CCSSEEEEEECSSEEEEEEE--CSSSCEEEE---EEEC
T ss_pred HHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC-----CcCCeEEEEeCCCcceEEEE--cCCcEEEEE---Eecc
Confidence 35677888888 99 6555 899999987754321 35779999999999999995 444442222 2579
Q ss_pred ccHHHHHHHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCC----------CCceeEEE--eccccC---c--
Q 003290 230 GGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSA----------NPEAPLNI--ECLMEE---K-- 292 (833)
Q Consensus 230 GG~~~D~~l~~~l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~----------~~~~~~~i--e~l~~~---~-- 292 (833)
||++++..|..-|. +++ +..||++|. +.. .....+.+ +.+... .
T Consensus 440 gG~~VT~DIA~~Lg----------~~d--------~~~AErIK~-YG~A~~e~lf~~~dede~Iev~~~~lgp~~~~R~~ 500 (607)
T 1nbw_A 440 AGNMVSLLIKTELG----------LED--------LSLAEAIKK-YPLAKVESLFSIRHENGAVEFFREALSPAVFAKVV 500 (607)
T ss_dssp CHHHHHHHHHHHHT----------CSC--------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTCEE
T ss_pred chHHHHHHHHHHhC----------CCC--------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeeeee
Confidence 99999999976543 221 267999998 521 12223444 222110 0
Q ss_pred ----cceEEecHHH--HHHHHHHHHHHHHHH--HHHHHHHcCC-----CCCCccEEEEeCCCCChHHHHHHHHHHhCC-C
Q 003290 293 ----DVRGFIKRDE--FEQISAPILERVKRP--LEKALAETGL-----SVEDVHMVEVVGSSSRVPAIIKILTEFFGK-E 358 (833)
Q Consensus 293 ----d~~~~itr~e--fe~l~~~~~~~i~~~--i~~~l~~~~~-----~~~~i~~ViLvGG~sriP~v~~~l~~~fg~-~ 358 (833)
+--..| +.. +|+ ++-+-+++.+. +..+|+..+. +..+|..|+|+||+|.++.+.++..+.|+. +
T Consensus 501 ~~~~~~L~~I-~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~~ 578 (607)
T 1nbw_A 501 YIKEGELVPI-DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHYG 578 (607)
T ss_dssp EEETTEEEEE-CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTTT
T ss_pred cccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcCC
Confidence 111133 344 555 44444443332 3445777654 345779999999999999999999999975 4
Q ss_pred C-------CCCCCchhHHHhHHHHhc
Q 003290 359 P-------RRTMNASECVARGCALQC 377 (833)
Q Consensus 359 ~-------~~~~npdeava~Gaa~~a 377 (833)
+ ...-+|..|+|.|.+++.
T Consensus 579 VRiGrP~~~g~~gP~fAtAvGLlly~ 604 (607)
T 1nbw_A 579 VVAGQGNIRGTEGPRNAVATGLLLAG 604 (607)
T ss_dssp CEEEECCGGGTSCSCCHHHHHHHHHH
T ss_pred eEEecCCccccCCchHHHHHHHHHhh
Confidence 3 224489999999999764
No 35
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.05 E-value=2.5e-10 Score=106.59 Aligned_cols=81 Identities=19% Similarity=0.344 Sum_probs=64.7
Q ss_pred ccceEEEeecccceEEEEcCCCCcccCcCCCCCceEeeecCCCCcCcceEEEEeecCc----eEEEEEEeccCc------
Q 003290 386 VREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGT----FTVDVQYADVSE------ 455 (833)
Q Consensus 386 ~~~~~~~d~~~~~i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~~~~~~~------ 455 (833)
++++.+.|++|++|||++.++ .+.+||++|++||++++.+|++..| +.|.+||++...
T Consensus 14 ~~d~~l~Dv~p~slGIe~~~g------------~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~~n~~ 81 (135)
T 1q5l_A 14 PRGSHMVDVTPLSLGIETMGG------------VMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKS 81 (135)
T ss_dssp -------CCCSSCCCEEETTT------------EECCSSCSSSCSSBCCEEEECCCSSSCSSCEEEEEECCSSSCSSSEE
T ss_pred eCcEEEEEeecCcEEEEEECC------------EEEEEEcCCCeEeEeEeEEEEeccCCceEEEEEEEEeCCcccccCcE
Confidence 568899999999999999876 7899999999999999999998765 889999986432
Q ss_pred c-------------ccceEEEEEEEcCCceEEEEec
Q 003290 456 F-------------ERAKVKVKVRLNMHGIVSIESA 478 (833)
Q Consensus 456 l-------------~~~~i~v~~~~d~~Gi~~v~~~ 478 (833)
| +.++|+|+|.+|.||+|+|++.
T Consensus 82 Lg~f~l~gipp~p~G~~~IeVtf~iD~nGiL~V~a~ 117 (135)
T 1q5l_A 82 LGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAK 117 (135)
T ss_dssp EEEEECCCCCSCCSSSCCEEEEEEECTTSEEEEEEE
T ss_pred EEEEEEeCCCCCCCceeEEEEEEEECCCCEEEEEEE
Confidence 1 4568999999999999999885
No 36
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=98.97 E-value=5.3e-10 Score=102.33 Aligned_cols=80 Identities=16% Similarity=0.368 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh-hhhccCCHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhccchHHHHH
Q 003290 601 MEETKDRKNAVEAYVYDMRNKLCD-KYQDFVTDSERELFTSKLQETEDWLYEDGEDETKGVYVAKLEELKKQGDPIEERY 679 (833)
Q Consensus 601 ~~~~~~akN~LEs~iy~~r~~L~~-~~~~~~~~~er~~i~~~l~e~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~R~ 679 (833)
+|++.++||.||+|||++|..|.+ .+...+++++|++|...|.++++||+++ .++++++|+.++++|+.++.||..|+
T Consensus 13 ~re~iEarN~aEsliy~~e~~L~e~~~~dkl~~eek~~I~~~i~el~~~L~~~-~~ad~e~ik~k~~eL~~~~~~i~~k~ 91 (120)
T 2p32_A 13 GLVPRGSHMGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSN-QTAEKEEFEHQQKDLEGLANPIISKL 91 (120)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTCTTTGGGSCHHHHHHHHHHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhchhhhccCCHHHHHHHHHHHHHHHHHHHcC-CcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 467789999999999999999974 4888999999999999999999999864 67889999999999999999999987
Q ss_pred Hh
Q 003290 680 KE 681 (833)
Q Consensus 680 ~e 681 (833)
+.
T Consensus 92 y~ 93 (120)
T 2p32_A 92 YQ 93 (120)
T ss_dssp CC
T ss_pred HH
Confidence 63
No 37
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=98.84 E-value=1.4e-09 Score=98.53 Aligned_cols=77 Identities=22% Similarity=0.419 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhh-hhhccCCHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhccchHHHHHHh
Q 003290 604 TKDRKNAVEAYVYDMRNKLCD-KYQDFVTDSERELFTSKLQETEDWLYEDGEDETKGVYVAKLEELKKQGDPIEERYKE 681 (833)
Q Consensus 604 ~~~akN~LEs~iy~~r~~L~~-~~~~~~~~~er~~i~~~l~e~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~R~~e 681 (833)
+.++||.||+|||++|..|.+ ++...+++++|++|...|.++++||+++ .+++.++|+.++++|+.++.||..|+++
T Consensus 2 l~EarN~aE~~iy~~e~~L~~~e~~~kl~~~ek~~i~~~i~~l~~~L~~~-~~ad~~~i~~~~~~L~~~~~~i~~~~~~ 79 (113)
T 1ud0_A 2 VPRGSHMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKN-QTAEKEEFEHQQKELEKVCNPIITKLYQ 79 (113)
T ss_dssp --CCHHHHHHHHHHHHHHHTSGGGTTTSCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcC-CccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567999999999999999963 6888999999999999999999999743 4567899999999999999999998874
No 38
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.76 E-value=5.3e-07 Score=94.78 Aligned_cols=171 Identities=20% Similarity=0.190 Sum_probs=98.2
Q ss_pred EEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEEEEeCCeEEEEEeeCCCCcccHHHHHHHHHHHHHHHH
Q 003290 168 LRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFK 247 (833)
Q Consensus 168 ~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~d~~lGG~~~D~~l~~~l~~~~~ 247 (833)
..+++|.+|.+.+..... + +.-.++|+||+++.+..+ .++.+.-......+..|+-.| .+++...+
T Consensus 77 ~~~v~Ei~ah~~ga~~~~---~----~~~~vidiGGqd~k~i~~--~~g~v~~~~mn~~ca~GtG~~----le~~a~~l- 142 (270)
T 1hux_A 77 DKQMSELSCHAMGASFIW---P----NVHTVIDIGGQDVKVIHV--ENGTMTNFQMNDKCAAGTGRF----LDVMANIL- 142 (270)
T ss_dssp SEEECHHHHHHHHHHHHC---T----TCCEEEEEETTEEEEEEE--ETTEEEEEEEESSCCTTSHHH----HHHHHHHH-
T ss_pred CCCcccHHHHHHHHHHhC---C----CCCEEEEECCCceEEEEE--eCCceeeeccccccchhhHHH----HHHHHHHh-
Confidence 467999999986543221 1 122589999998887665 566553333333344444333 34444333
Q ss_pred hhhccCccCCHHHHHHHHHHHHHHhhhcCCCCceeEEEeccccCccceEEecHHHH----------HHHHHHHHHHHHHH
Q 003290 248 EEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLMEEKDVRGFIKRDEF----------EQISAPILERVKRP 317 (833)
Q Consensus 248 ~k~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~~~~ie~l~~~~d~~~~itr~ef----------e~l~~~~~~~i~~~ 317 (833)
++++.+ +. +.+.+.+.-+..... | ..+.+.++ ++++..+++.+...
T Consensus 143 ---g~~~~e----l~---~la~~~~~p~~~~~~------c--------~vfa~s~v~~l~~~g~~~~di~~av~e~Va~~ 198 (270)
T 1hux_A 143 ---EVKVSD----LA---ELGAKSTKRVAISST------C--------TVFAESEVISQLSKGTDKIDIIAGIHRSVASR 198 (270)
T ss_dssp ---TCCTTT----HH---HHHTTCCSCCCCCCC------S--------HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred ---CCCHHH----HH---HHHhhCCCCCCcccc------c--------chhHhHHHHHHhhCCCCHHHHHHHHHHHHHHH
Confidence 343321 11 111111111100000 0 01223333 33444444444444
Q ss_pred HHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHhCCCCCCCCCchhHHHhHHHHhchhh
Q 003290 318 LEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAIL 380 (833)
Q Consensus 318 i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg~~~~~~~npdeava~Gaa~~aa~l 380 (833)
+..+++..++ .+.|+++||.++.|.+++.+.+.+|.++..+.+++.+.|+|||++|+..
T Consensus 199 i~~~~~~~~~----~~~i~~~GG~a~n~~~~~~~~~~lg~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 199 VIGLANRVGI----VKDVVMTGGVAQNYGVRGALEEGLGVEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp HHHHHHTTCC----CSSEEEESGGGGCHHHHHHHHHHHCSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred HHHHHhcCCC----CCeEEEeCccccCHHHHHHHHHHHCCCeEeCCCcchHhHHHHHHHHHHh
Confidence 4444443221 3679999999999999999999999988888888889999999998753
No 39
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=97.71 E-value=0.00011 Score=84.27 Aligned_cols=125 Identities=18% Similarity=0.245 Sum_probs=88.4
Q ss_pred CcEEEEecCccCHHHHHHHHHHH-HHcCCccEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEEEEeCC
Q 003290 138 VDCCIGIPVYFTDLQRRAVIDAA-TIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKG 216 (833)
Q Consensus 138 ~~~VITVP~~f~~~qR~al~~Aa-~~AGl~~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~ 216 (833)
..++||.|+.+....|+.|.+.+ +..|++.+.++.++.+|++++|. ...-||+|+|+|+|+++.|. .|
T Consensus 222 ~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl---------~ttGLVVDiG~g~T~VvPV~--eG 290 (655)
T 4am6_A 222 YKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI---------STSTCVVNIGAAETRIACVD--EG 290 (655)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC---------SSCEEEEEECSSCEEEEEEE--TT
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC---------CCceEEEcCCCceEEEEEEe--CC
Confidence 46999999999999999998887 57999999999999999877653 24679999999999999873 33
Q ss_pred eEEEEEeeCCCCcccHHHHHHHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCCC
Q 003290 217 QLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANP 279 (833)
Q Consensus 217 ~~~vl~~~~d~~lGG~~~D~~l~~~l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~~~ 279 (833)
.. +........+||+++|..|.++|..+--.....++.. .. =+..++.+|+.+..-.
T Consensus 291 ~v-l~~ai~rL~iGG~dLT~yL~kLL~~rgypy~~~~f~t--~~---e~eiVrdIKEk~CyVs 347 (655)
T 4am6_A 291 TV-LEHSAITLDYGGDDITRLFALFLLQSDFPLQDWKIDS--KH---GWLLAERLKKNFTTFQ 347 (655)
T ss_dssp EE-CGGGCEEESCCHHHHHHHHHHHHHHTTCSCCSCCTTS--HH---HHHHHHHHHHHHCCCC
T ss_pred EE-EhhheeeecchHHHHHHHHHHHHHHcCCCccccCCCC--cc---hHHHHHHHHHheEEEc
Confidence 21 1111113579999999999999875410000112211 11 1356778888886553
No 40
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=96.84 E-value=0.11 Score=55.60 Aligned_cols=65 Identities=14% Similarity=0.019 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHh---CCCCCCCC---CchhHHHhHHHHhchh
Q 003290 310 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFF---GKEPRRTM---NASECVARGCALQCAI 379 (833)
Q Consensus 310 ~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~f---g~~~~~~~---npdeava~Gaa~~aa~ 379 (833)
+.+.+...+.++++..+ ++.|+|+||.+....+++.|.+.+ |.++..+. -.|..+++|+|.+...
T Consensus 228 l~~~l~~~~~~~~~~~~-----~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~ 298 (330)
T 2ivn_A 228 AFAALVEVTERAVAHTE-----KDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMY 298 (330)
T ss_dssp HHHHHHHHHHHHHHHHC-----CSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC-----CCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHHHHH
Confidence 34444555555555544 568999999999999999999877 54444443 3567889998876543
No 41
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=96.83 E-value=0.016 Score=60.66 Aligned_cols=75 Identities=15% Similarity=0.075 Sum_probs=52.6
Q ss_pred ecHHHHH-HHHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCC-CCChHHHHHHHHHHh---CCCCCCCCCchhHHHhH
Q 003290 298 IKRDEFE-QISAPILERVKRPLEKALAETGLSVEDVHMVEVVGS-SSRVPAIIKILTEFF---GKEPRRTMNASECVARG 372 (833)
Q Consensus 298 itr~efe-~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG-~sriP~v~~~l~~~f---g~~~~~~~npdeava~G 372 (833)
.+++++- .++.-+.++|..+.....+..+ ++.|+++|| .+..|.+++.+.+.+ +.++..+.+|..+.|+|
T Consensus 207 ~~~eDIaasl~~sV~~~I~~la~~~a~~~~-----i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlG 281 (287)
T 2ews_A 207 FTPSNKLAAVIGVVGEVVTTMAITVAREFK-----TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIG 281 (287)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHH
Confidence 4555543 2333344444444443344433 456999999 899999999999985 56777888999999999
Q ss_pred HHHhc
Q 003290 373 CALQC 377 (833)
Q Consensus 373 aa~~a 377 (833)
||+.+
T Consensus 282 AaL~~ 286 (287)
T 2ews_A 282 ALYLE 286 (287)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 99875
No 42
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=96.58 E-value=0.81 Score=47.88 Aligned_cols=48 Identities=13% Similarity=0.102 Sum_probs=35.5
Q ss_pred CccEEEEeCCCCChHHHHHHHHHHhC-CCCCCCCCchhHHHhHHHHhchh
Q 003290 331 DVHMVEVVGSSSRVPAIIKILTEFFG-KEPRRTMNASECVARGCALQCAI 379 (833)
Q Consensus 331 ~i~~ViLvGG~sriP~v~~~l~~~fg-~~~~~~~npdeava~Gaa~~aa~ 379 (833)
+.+.|+|.||.+..+.+.+.|++.+. .++.... .+.+.++||++.+..
T Consensus 239 ~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~~ 287 (299)
T 2e2o_A 239 GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAYK 287 (299)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHHH
T ss_pred CCCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHHH
Confidence 45779999998776888888887774 3454444 567889999987753
No 43
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=96.39 E-value=0.033 Score=59.30 Aligned_cols=76 Identities=14% Similarity=0.083 Sum_probs=47.6
Q ss_pred HHHHHHHHcCCccEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEEEEeCCeEEEEEeeCCCCcccHHH
Q 003290 155 AVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDF 234 (833)
Q Consensus 155 al~~Aa~~AGl~~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~d~~lGG~~~ 234 (833)
.+..+-+..|+++--|-.+.+|.....|... .++ .....+|+|+|||+|.+++++ ++.+ .. ..+.++|+..+
T Consensus 102 fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~-~l~--~~~~~lvvDIGGGStEl~~~~--~~~~--~~-~~Sl~~G~v~l 173 (315)
T 1t6c_A 102 FLERVKREVGLVVEVITPEQEGRYAYLAVAY-SLK--PEGEVCVVDQGGGSTEYVFGK--GYKV--RE-VISLPIGIVNL 173 (315)
T ss_dssp HHHHHHHHTCCCEEECCHHHHHHHHHHHHHH-HTC--CCSEEEEEEEETTEEEEEEEE--TTEE--EE-EEEECCCHHHH
T ss_pred HHHHHHHHHCCCEEEcCHHHHHHHHHHHHHh-hcc--cCCCEEEEEeCCCcEEEEEEe--CCce--ee-EEEEeccHHHH
Confidence 3444444789996444445555444334433 222 245799999999999999964 4444 22 22478999888
Q ss_pred HHHH
Q 003290 235 DEVL 238 (833)
Q Consensus 235 D~~l 238 (833)
.+.+
T Consensus 174 ~e~~ 177 (315)
T 1t6c_A 174 TETF 177 (315)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7765
No 44
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=96.39 E-value=0.022 Score=61.27 Aligned_cols=69 Identities=14% Similarity=0.103 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHHHHHH----HHHcCCCCCCccEEEEeCC-CCChHHHHHHHHHHhC------CCCCCCCCchhHHHhH
Q 003290 304 EQISAPILERVKRPLEKA----LAETGLSVEDVHMVEVVGS-SSRVPAIIKILTEFFG------KEPRRTMNASECVARG 372 (833)
Q Consensus 304 e~l~~~~~~~i~~~i~~~----l~~~~~~~~~i~~ViLvGG-~sriP~v~~~l~~~fg------~~~~~~~npdeava~G 372 (833)
|+++..++..|..-|-.. .+..++ +.|+++|| .++.|.+++.|+..++ .++....++..+-|+|
T Consensus 279 eDIa~gll~sVa~~I~~lA~l~A~~~~i-----~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlG 353 (360)
T 2i7n_A 279 EDLARATLVTITNNIGSIARMCALNENI-----DRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVG 353 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTC-----CCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCC-----CeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHH
Confidence 344555555444444333 244443 45999999 8999999999999863 5666677899999999
Q ss_pred HHHhc
Q 003290 373 CALQC 377 (833)
Q Consensus 373 aa~~a 377 (833)
||+.+
T Consensus 354 AaL~~ 358 (360)
T 2i7n_A 354 ALLEL 358 (360)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99875
No 45
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=96.35 E-value=0.43 Score=50.28 Aligned_cols=44 Identities=14% Similarity=0.144 Sum_probs=29.9
Q ss_pred cCCccEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEE
Q 003290 163 AGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIA 211 (833)
Q Consensus 163 AGl~~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv 211 (833)
.|++ +.+.|+..|+|++-....... ..++++++-+|.| +-.+++
T Consensus 98 ~~~p-v~v~NDa~aaal~E~~~g~~~---~~~~~~~l~~GtG-iG~gii 141 (302)
T 3vov_A 98 TGRP-VFLENDANAAALAEHHLGAAQ---GEESSLYLTVSTG-IGGGVV 141 (302)
T ss_dssp HSSC-EEEEEHHHHHHHHHHHHSTTT---TCSCEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEEechHHHHHHHHHhCCCC---CCCCEEEEEECCc-eeEEEE
Confidence 4776 579999999998765443211 2467888888887 444444
No 46
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=96.21 E-value=0.017 Score=51.57 Aligned_cols=81 Identities=21% Similarity=0.384 Sum_probs=65.0
Q ss_pred hhhcchHHHHHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHH
Q 003290 681 EFTDRSSVIDQLAYCINSYREAALSSDPKFDHIDIAEKQKVLNECADAEAWVREKKQQQDALPKYAAPVLLLGDVRRKAE 760 (833)
Q Consensus 681 e~~~rp~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~ 760 (833)
+.+.|-++.+.|.+.+..++..+.. ...-..++.+++..|...|+++..||+.. + .....+|+.|++
T Consensus 3 ~~re~ieakN~lEs~iy~~e~~l~e-~~~~~kl~~eek~~i~~~i~e~~~wL~~~---~---------~a~~e~i~~k~~ 69 (113)
T 3lof_A 3 AAAERVSAKNALESYAFNMKSAVED-EGLKGKISEADKKKVLDKCQEVISWLDAN---T---------LAEKDEFEHKRK 69 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTC-GGGBTTBCHHHHHHHHHHHHHHHHHHHHC---T---------TCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc-hhhhccCCHHHHHHHHHHHHHHHHHHHcC---C---------cCCHHHHHHHHH
Confidence 4566778889999999999988854 11234699999999999999999999752 1 124679999999
Q ss_pred HHHHHhHhhhcCCC
Q 003290 761 ALDRFCRPIMTKPK 774 (833)
Q Consensus 761 ~l~~~~~~l~~k~k 774 (833)
+|+..|.+|+.+.-
T Consensus 70 eL~~~~~~i~~k~y 83 (113)
T 3lof_A 70 ELEQVCNPIISGLY 83 (113)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999987654
No 47
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=96.02 E-value=0.3 Score=51.90 Aligned_cols=44 Identities=18% Similarity=0.202 Sum_probs=31.0
Q ss_pred cCCccEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEE
Q 003290 163 AGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIA 211 (833)
Q Consensus 163 AGl~~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv 211 (833)
.|++ +.+.|+..|+|++........ ..++++++-+|.| +-.+++
T Consensus 96 ~~~p-v~v~NDa~aaal~E~~~g~~~---~~~~~~~l~~GtG-iG~gii 139 (321)
T 3vgl_A 96 VGLP-VVVENDANAAAWGEYRFGAGQ---GHDDVICITLGTG-LGGGII 139 (321)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTT---TCSSEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEEehhhhHHHHHHHhCCCC---CCCCEEEEEeCcc-eEEEEE
Confidence 4886 689999999998865443211 2467889999988 555554
No 48
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=95.99 E-value=1.9 Score=45.97 Aligned_cols=61 Identities=7% Similarity=-0.075 Sum_probs=41.4
Q ss_pred CcCcEEEEecCccCHHHHHHHHHHHHH-cC--CccEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceE
Q 003290 136 AVVDCCIGIPVYFTDLQRRAVIDAATI-AG--LHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASL 206 (833)
Q Consensus 136 ~~~~~VITVP~~f~~~qR~al~~Aa~~-AG--l~~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~ 206 (833)
.+..+.|++|...+......+.+..+. .| .-.+.+.|+..|+|+++ . . ..++++=+|-|.-
T Consensus 70 ~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~-~---~------~~~v~v~~GTGig 133 (347)
T 2ch5_A 70 PLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA-T---P------DGGVVLISGTGSN 133 (347)
T ss_dssp CBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH-C---S------SCEEEEEESSSEE
T ss_pred ceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh-C---C------CCcEEEEEcCCce
Confidence 577899999999987655566655543 34 13468999999999873 2 1 2455555676653
No 49
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=95.87 E-value=1.3 Score=47.09 Aligned_cols=47 Identities=21% Similarity=0.192 Sum_probs=32.6
Q ss_pred CccEEEEeCCCCChHHHHHHHHHHhCCC---------CCCCCCchhHHHhHHHHhc
Q 003290 331 DVHMVEVVGSSSRVPAIIKILTEFFGKE---------PRRTMNASECVARGCALQC 377 (833)
Q Consensus 331 ~i~~ViLvGG~sriP~v~~~l~~~fg~~---------~~~~~npdeava~Gaa~~a 377 (833)
+++.|+|-||.+..+.+.+.|++.+... +....-.+.+.++|||+.+
T Consensus 269 ~p~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 269 DPHVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLN 324 (327)
T ss_dssp CCSEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTT
T ss_pred CCCEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHH
Confidence 3578999999888777777777666321 1222345789999999875
No 50
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=95.75 E-value=0.012 Score=68.03 Aligned_cols=87 Identities=9% Similarity=0.117 Sum_probs=63.5
Q ss_pred EecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHhCCCCCCCCCchhHHHhHHHHh
Q 003290 297 FIKRDEFEQISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQ 376 (833)
Q Consensus 297 ~itr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg~~~~~~~npdeava~Gaa~~ 376 (833)
.-+|.+|-.++.-+++.+.-.++.+++...-....++.|.++||+++.+.+.+++.+.||.++... ...|+.|+|||+.
T Consensus 408 ~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~~~~~i~~~GG~aks~~~~Qi~ADv~g~pV~~~-~~~e~~alGAA~l 486 (554)
T 3l0q_A 408 STTPEDMALRYLATIQALALGTRHIIETMNQNGYNIDTMMASGGGTKNPIFVQEHANATGCAMLLP-EESEAMLLGSAMM 486 (554)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEESGGGGCHHHHHHHHHHHCCEEEEE-SCSCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccCHHHHHHHHHhhCCeEEec-CCCcchHHHHHHH
Confidence 347888855455666666555555444321112357899999999999999999999999888654 4567999999999
Q ss_pred chhhcCCC
Q 003290 377 CAILSPTF 384 (833)
Q Consensus 377 aa~ls~~~ 384 (833)
|+.-.+.+
T Consensus 487 A~~a~G~~ 494 (554)
T 3l0q_A 487 GTVAAGVF 494 (554)
T ss_dssp HHHHTTSS
T ss_pred HHHHcCCc
Confidence 98766544
No 51
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=95.67 E-value=0.52 Score=49.49 Aligned_cols=49 Identities=12% Similarity=0.116 Sum_probs=35.3
Q ss_pred CccEEEEeCCCCChHHHHHHHHHHhCC------CCCCCCCchhHHHhHHHHhchh
Q 003290 331 DVHMVEVVGSSSRVPAIIKILTEFFGK------EPRRTMNASECVARGCALQCAI 379 (833)
Q Consensus 331 ~i~~ViLvGG~sriP~v~~~l~~~fg~------~~~~~~npdeava~Gaa~~aa~ 379 (833)
+++.|+|-||.++.+.+.+.|++.+.. .+......+.+.++||++++..
T Consensus 237 ~p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~ 291 (297)
T 4htl_A 237 DPTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQ 291 (297)
T ss_dssp CCSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHH
Confidence 357899999998888777788777742 1223335677999999987753
No 52
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=95.58 E-value=0.015 Score=66.88 Aligned_cols=77 Identities=13% Similarity=0.118 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHhCCCCCCCCCchhHHHhHHHHhchhhc
Q 003290 304 EQISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILS 381 (833)
Q Consensus 304 e~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg~~~~~~~npdeava~Gaa~~aa~ls 381 (833)
..++.-+++.+.-.++.+++..+.....++.|.++||+++.+.+.+++.+.||.++... ...|+.|+|||+.|+.-.
T Consensus 407 ~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA~~a~ 483 (538)
T 4bc3_A 407 DVEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVFDAPVYVI-DTANSACVGSAYRAFHGL 483 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHHTSCEEEC-CCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHhCCceEec-CCCCchHHHHHHHHHHHh
Confidence 34555666666666666666655444567899999999999999999999999988654 457899999999987644
No 53
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=95.56 E-value=0.015 Score=66.43 Aligned_cols=80 Identities=20% Similarity=0.220 Sum_probs=59.1
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHhCCCC-CCCCCchhHHHhHHHHhc
Q 003290 299 KRDEFEQISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEP-RRTMNASECVARGCALQC 377 (833)
Q Consensus 299 tr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg~~~-~~~~npdeava~Gaa~~a 377 (833)
+|.+| +.-+++.+.-.++.+++...- .. ++.|.++||+++.+.+.+++.+.||.++ .. ..+.|+.|+|||+.|
T Consensus 375 ~~~~l---~RAvlEgia~~~~~~~~~l~~-g~-~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~~e~~alGaA~lA 448 (511)
T 3hz6_A 375 TRAQI---LLAVLEGAALSLRWCAELLGM-EK-VGLLKVVGGGARSEAWLRMIADNLNVSLLVK-PDAHLHPLRGLAALA 448 (511)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHTG-GG-CCEEEEESGGGGCHHHHHHHHHHHTCEEEEC-CCGGGHHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHhc-CC-CCEEEEeCchhcCHHHHHHHHHHHCCeeEEe-cCCCCchHHHHHHHH
Confidence 55554 444555555555555544322 23 7899999999999999999999999988 55 458899999999999
Q ss_pred hhhcCCC
Q 003290 378 AILSPTF 384 (833)
Q Consensus 378 a~ls~~~ 384 (833)
+.-.+.+
T Consensus 449 ~~a~G~~ 455 (511)
T 3hz6_A 449 AVELEWS 455 (511)
T ss_dssp HHHTTSC
T ss_pred HHHhCCc
Confidence 8766543
No 54
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=95.50 E-value=0.011 Score=67.13 Aligned_cols=82 Identities=17% Similarity=0.186 Sum_probs=56.1
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHhCCCCCCCCCchhHHHhHHHHhch
Q 003290 299 KRDEFEQISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCA 378 (833)
Q Consensus 299 tr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg~~~~~~~npdeava~Gaa~~aa 378 (833)
+|.++ +.-+++.+.-.++.+++...-....++.|.++||+++.+.+.+++.+.||.++......+.+.|+|||+.|+
T Consensus 357 ~~~~~---~rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~~e~~~alGAA~lA~ 433 (484)
T 2itm_A 357 GPNEL---ARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARLAQ 433 (484)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHTTTCCCSCEEEESGGGCCHHHHHHHHHHHCCCEEEESCTTSCHHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEeccccCHHHHHHHHHHhCCeEEeCCCCCcccHHHHHHHHH
Confidence 45554 444444444444444433211123467899999999999999999999999887765555458999999998
Q ss_pred hhcCC
Q 003290 379 ILSPT 383 (833)
Q Consensus 379 ~ls~~ 383 (833)
.-.+.
T Consensus 434 ~~~g~ 438 (484)
T 2itm_A 434 IAANP 438 (484)
T ss_dssp HHHCT
T ss_pred HHcCC
Confidence 65543
No 55
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=95.49 E-value=0.017 Score=65.79 Aligned_cols=80 Identities=15% Similarity=0.218 Sum_probs=58.7
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHhCCCCCCCCCchhHHHhHHHHhch
Q 003290 299 KRDEFEQISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCA 378 (833)
Q Consensus 299 tr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg~~~~~~~npdeava~Gaa~~aa 378 (833)
+|.++ +.-+++.+.-.++.+++...-.. .++.|.++||+++.+.+.+++.+.||.++... ...|+.|+|||+.|+
T Consensus 365 ~~~~l---~rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~lA~ 439 (497)
T 2zf5_O 365 GREHL---ARATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADILNRKVIRP-VVKETTALGAAYLAG 439 (497)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhcCCeEEEc-CCCcchHHHHHHHHH
Confidence 45443 44555555555555555543222 57889999999999999999999999888655 345699999999998
Q ss_pred hhcCC
Q 003290 379 ILSPT 383 (833)
Q Consensus 379 ~ls~~ 383 (833)
.-.+.
T Consensus 440 ~~~g~ 444 (497)
T 2zf5_O 440 LAVDY 444 (497)
T ss_dssp HHTTS
T ss_pred HHhCc
Confidence 76554
No 56
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=95.44 E-value=0.018 Score=65.76 Aligned_cols=82 Identities=7% Similarity=0.035 Sum_probs=57.1
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHhCCCCCCCCCchhHHHhHHHHhch
Q 003290 299 KRDEFEQISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCA 378 (833)
Q Consensus 299 tr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg~~~~~~~npdeava~Gaa~~aa 378 (833)
+|.+| +.-+++.+.-.++.+++...-....++.|.++||+++.+.+.+++.+.||.++... .+.|+.|+|||+.|+
T Consensus 364 ~~~~l---~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA~ 439 (504)
T 3ll3_A 364 QKPEM---ARAVIEGIIFNLYDAASNLIKNTKKPVAINATGGFLKSDFVRQLCANIFNVPIVTM-KEQQSGTLAAMFLAR 439 (504)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHTTSCCCSEEEEESGGGCSHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCchhcCHHHHHHHHHhhCCeEEec-CCCCchhHHHHHHHH
Confidence 55554 34444444444444433321111258899999999999999999999999988664 466799999999998
Q ss_pred hhcCCC
Q 003290 379 ILSPTF 384 (833)
Q Consensus 379 ~ls~~~ 384 (833)
.-.+.+
T Consensus 440 ~a~G~~ 445 (504)
T 3ll3_A 440 QALGLN 445 (504)
T ss_dssp HHTTSC
T ss_pred HHcCcc
Confidence 765543
No 57
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=95.43 E-value=0.28 Score=52.18 Aligned_cols=45 Identities=9% Similarity=0.190 Sum_probs=31.0
Q ss_pred Hc-CCccEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEE
Q 003290 162 IA-GLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIA 211 (833)
Q Consensus 162 ~A-Gl~~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv 211 (833)
.. |++ +.+.|+..|+|++-....... ..++++++-+|.| +-.+++
T Consensus 116 ~~~~~p-V~v~NDa~aaalaE~~~g~~~---~~~~~v~l~~GtG-iG~gii 161 (321)
T 3r8e_A 116 EFPHIH-FKIENDAKCAALGEYYFGENK---RMQTFILLALGTG-VGSGVM 161 (321)
T ss_dssp HCTTSE-EEEEEHHHHHHHHHHHHSTTT---TCSSEEEEEESSS-EEEEEE
T ss_pred HcCCCC-EEEEchHHHHHHHHHHhCCCC---CCCcEEEEEECCc-eEEEEE
Confidence 45 776 579999999998765443211 2467888999988 555554
No 58
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=95.37 E-value=1.3 Score=46.17 Aligned_cols=43 Identities=19% Similarity=0.169 Sum_probs=29.5
Q ss_pred HcCCccEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEE
Q 003290 162 IAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIA 211 (833)
Q Consensus 162 ~AGl~~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv 211 (833)
..|++ +.+.|+..|+|++... ... ..++++++-+|.| +-.+++
T Consensus 93 ~~~~p-v~v~NDa~aaa~~e~~-~~~----~~~~~v~l~~GtG-iG~giv 135 (292)
T 2gup_A 93 SYQLP-VHLENDANCVGLSELL-AHP----ELENAACVVIGTG-IGGAMI 135 (292)
T ss_dssp GGCCC-EEEEEHHHHHHHHHHH-HCT----TCSSEEEEEESSS-EEEEEE
T ss_pred HcCCC-EEEechHHHHHHHHHH-hcC----CCCeEEEEEECCc-eEEEEE
Confidence 35776 6899999999987654 111 2467888889987 445554
No 59
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=95.33 E-value=0.21 Score=53.11 Aligned_cols=77 Identities=14% Similarity=0.253 Sum_probs=47.0
Q ss_pred HHHHHHHHHcCCccEEeechhHHHHHHH-hhhcCCCCCCCCceEEEEEeCCceEEEEEEEEeCCeEEEEEeeCCCCcccH
Q 003290 154 RAVIDAATIAGLHPLRLFHETTATALAY-GIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGR 232 (833)
Q Consensus 154 ~al~~Aa~~AGl~~~~li~EptAaAl~y-~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~d~~lGG~ 232 (833)
..+..+-+..|+++ .+|+...=|.+.| |... .++. .....||+|+|||+|.+++++ ++.+. . ..+.++|.-
T Consensus 93 ~fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~-~~~~-~~~~~lviDIGGGStEl~~~~--~~~~~--~-~~Sl~lG~v 164 (315)
T 3mdq_A 93 VLIDRIKKEVNIDV-EVIDGAREAELIFRGVQQ-AVPM-EDHISLAMDIGGGSVEFIIGN--KNEIL--W-KQSFEIGGQ 164 (315)
T ss_dssp HHHHHHHHHHCCCE-EECCHHHHHHHHHHHHHH-HSCC-TTCCEEEEEECSSCEEEEEEC--SSCEE--E-EEEESCCHH
T ss_pred HHHHHHHHHHCCCe-EEeCHHHHHHHHHHHHHh-cCCC-CCCCEEEEEeCCCceEEEEEE--CCeEe--e-eEEEechhh
Confidence 33445555679996 5665554444444 4333 2221 235799999999999999975 44332 2 224678888
Q ss_pred HHHHHH
Q 003290 233 DFDEVL 238 (833)
Q Consensus 233 ~~D~~l 238 (833)
.+.+.+
T Consensus 165 rl~e~f 170 (315)
T 3mdq_A 165 RLIDRF 170 (315)
T ss_dssp HHHHHS
T ss_pred HHHHHh
Confidence 776643
No 60
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=95.19 E-value=0.015 Score=66.42 Aligned_cols=79 Identities=22% Similarity=0.328 Sum_probs=54.9
Q ss_pred cHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHhCCCCCCCCCchhHHHhHHHHhc
Q 003290 299 KRDEFEQI-SAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQC 377 (833)
Q Consensus 299 tr~efe~l-~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg~~~~~~~npdeava~Gaa~~a 377 (833)
+|.+|-.. ++.+.-.+...++ .|++.+. .++.|.++||+++.+.+.+++.+.||.++... .+.|+.|+|||+.|
T Consensus 395 ~~~~l~RAvlEgia~~~r~~l~-~l~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~-~~~e~~alGAA~lA 469 (515)
T 3i8b_A 395 TRENLARAFVEGLLCSQRDCLE-LIRSLGA---SITRILLIGGGAKSEAIRTLAPSILGMDVTRP-ATDEYVAIGAARQA 469 (515)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH-HHHHTTC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEE-CCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHHcCC---CCCEEEEECchhcCHHHHHHHHHHhCCceEec-CCcccHHHHHHHHH
Confidence 56554332 2233333333332 3444454 47889999999999999999999999888654 45678999999999
Q ss_pred hhhcC
Q 003290 378 AILSP 382 (833)
Q Consensus 378 a~ls~ 382 (833)
+.-.+
T Consensus 470 ~~a~G 474 (515)
T 3i8b_A 470 AWVLS 474 (515)
T ss_dssp HHHHH
T ss_pred HHHcC
Confidence 86544
No 61
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.04 E-value=0.025 Score=64.88 Aligned_cols=83 Identities=17% Similarity=0.302 Sum_probs=57.7
Q ss_pred ecHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHhCCCCCCCCCchhHHHhHHHHh
Q 003290 298 IKRDEFEQI-SAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQ 376 (833)
Q Consensus 298 itr~efe~l-~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg~~~~~~~npdeava~Gaa~~ 376 (833)
-+|.++-.. ++.+.-.+...++..-+..|. .++.|.++||+++.+.+.+++.+.||.++.+. ...|+.|+|||+.
T Consensus 371 ~~~~~i~RAvlEgia~~~r~~le~l~~~~g~---~~~~i~v~GGgaks~~~~Qi~ADvlg~pV~~~-~~~E~~alGAA~l 446 (526)
T 3ezw_A 371 VNANHIIRATLESIAYQTRDVLEAMQADSGI---RLHALRVDGGAVANNFLMQFQSDILGTRVERP-EVREVTALGAAYL 446 (526)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEECchhhCHHHHHHHHHHHCCEEEeC-CCCchHHHHHHHH
Confidence 355554322 222333333333333334565 47889999999999999999999999888654 4568899999999
Q ss_pred chhhcCCC
Q 003290 377 CAILSPTF 384 (833)
Q Consensus 377 aa~ls~~~ 384 (833)
|+.-.+.+
T Consensus 447 A~~a~G~~ 454 (526)
T 3ezw_A 447 AGLAVGFW 454 (526)
T ss_dssp HHHHTTSS
T ss_pred HHHHhCCC
Confidence 98766654
No 62
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=94.87 E-value=0.47 Score=50.31 Aligned_cols=44 Identities=18% Similarity=0.263 Sum_probs=30.4
Q ss_pred cCCccEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEE
Q 003290 163 AGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIA 211 (833)
Q Consensus 163 AGl~~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv 211 (833)
.|++ +.+.|+..|+|++........ ...+++++-+|.| +-.+++
T Consensus 108 ~~~p-v~v~ND~~aaa~~e~~~g~~~---~~~~~~~l~~GtG-iG~giv 151 (326)
T 2qm1_A 108 LGIP-FALDNDANVAALGERWKGAGE---NNPDVIFITLGTG-VGGGIV 151 (326)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTT---TCSCEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEecHHHHHHHHHHHhCCCC---CCCcEEEEEECCc-eEEEEE
Confidence 4776 679999999998754432211 2467888899988 555554
No 63
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=94.85 E-value=0.021 Score=66.24 Aligned_cols=80 Identities=15% Similarity=0.183 Sum_probs=56.4
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCC-ChHHHHHHHHHHhCCCCCCCCCchhHHHhHHHHhc
Q 003290 299 KRDEFEQISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSS-RVPAIIKILTEFFGKEPRRTMNASECVARGCALQC 377 (833)
Q Consensus 299 tr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-riP~v~~~l~~~fg~~~~~~~npdeava~Gaa~~a 377 (833)
+|.+| +.-+++.+.-.++.+++...-....++.|.++||++ +.+.+.+++.+.||.++... .+.|+.|+|||+.|
T Consensus 410 t~~~l---~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~ks~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA 485 (572)
T 3jvp_A 410 KPEEI---YRALLEATAFGTRAIVDAFHGRGVEVHELYACGGLPQKNHLLMQIFADVTNREIKVA-ASKQTPALGAAMFA 485 (572)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEESSHHHHCHHHHHHHHHHHTSCEEEB-CCSSHHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCcCEEEEEcCchhhCHHHHHHHHHHHCCeeEec-CCCccHHHHHHHHH
Confidence 56654 444444444444443332211223588999999999 99999999999999988554 46789999999999
Q ss_pred hhhcC
Q 003290 378 AILSP 382 (833)
Q Consensus 378 a~ls~ 382 (833)
+.-.+
T Consensus 486 ~~a~G 490 (572)
T 3jvp_A 486 SVAAG 490 (572)
T ss_dssp HHHHC
T ss_pred HHhcC
Confidence 86554
No 64
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=94.79 E-value=0.023 Score=64.80 Aligned_cols=53 Identities=19% Similarity=0.290 Sum_probs=45.7
Q ss_pred CccEEEEeCCCCChHHHHHHHHHHhCCCCCCCCCchhHHHhHHHHhchhhcCCC
Q 003290 331 DVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTF 384 (833)
Q Consensus 331 ~i~~ViLvGG~sriP~v~~~l~~~fg~~~~~~~npdeava~Gaa~~aa~ls~~~ 384 (833)
.++.|.++||+++.+.+.+++.+.||.++... .+.|+.|+|||+.|+.-.+.+
T Consensus 404 ~~~~i~~~GG~aks~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~la~~a~G~~ 456 (501)
T 3g25_A 404 DVQSLRVDGGAVKNNFIMQFQADIVNTSVERP-EIQETTALGAAFLAGLAVGFW 456 (501)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHHHHHHTTSS
T ss_pred CCcEEEEecchhcCHHHHHHHHHHhCCceEec-CCCcchHHHHHHHHHHHhCcc
Confidence 47889999999999999999999999887554 467899999999998766654
No 65
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=94.65 E-value=0.025 Score=64.61 Aligned_cols=82 Identities=13% Similarity=0.317 Sum_probs=56.7
Q ss_pred cHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHhCCCCCCCCCchhHHHhHHHHhc
Q 003290 299 KRDEFEQI-SAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQC 377 (833)
Q Consensus 299 tr~efe~l-~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg~~~~~~~npdeava~Gaa~~a 377 (833)
+|.+|-.. ++.+.-.+...++..-+..|. .++.|.++||+++.+.+.+++.+.||.++... .+.|+.|+|||+.|
T Consensus 373 ~~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA 448 (506)
T 3h3n_X 373 TKEDFVRATLQAVAYQSKDVIDTMKKDSGI---DIPLLKVDGGAAKNDLLMQFQADILDIDVQRA-ANLETTALGAAYLA 448 (506)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCS---CCCEEEEESGGGGCHHHHHHHHHHHTSEEEEC-SSSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEecccccCHHHHHHHHHHhCCeEEec-CCCcchhHHHHHHH
Confidence 56555432 223333333333332222454 47889999999999999999999999888654 46789999999999
Q ss_pred hhhcCCC
Q 003290 378 AILSPTF 384 (833)
Q Consensus 378 a~ls~~~ 384 (833)
+.-.+.+
T Consensus 449 ~~a~G~~ 455 (506)
T 3h3n_X 449 GLAVGFW 455 (506)
T ss_dssp HHHTTSS
T ss_pred HHHhCcc
Confidence 8766654
No 66
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=94.65 E-value=0.094 Score=52.56 Aligned_cols=71 Identities=13% Similarity=0.123 Sum_probs=55.5
Q ss_pred cchHHHHHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHHHHH
Q 003290 684 DRSSVIDQLAYCINSYREAALSSDPKFDHIDIAEKQKVLNECADAEAWVREKKQQQDALPKYAAPVLLLGDVRRKAEALD 763 (833)
Q Consensus 684 ~rp~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~ 763 (833)
.+-++.+.+...+..++..+... -..++.++++++.+.+.++..||+.. ...+|+.++++|+
T Consensus 143 ~~~e~kn~le~~i~~~~~~l~~~---~~~l~~~~k~~i~~~l~~~~~~L~~~---------------~~~~i~~~~~~L~ 204 (219)
T 4e81_A 143 ELVQTRNQGDHLLHSTRKQVEEA---GDKLPADDKTAIESALTALETALKGE---------------DKAAIEAKMQELA 204 (219)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHHHSS---------------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh---hhhCCHHHHHHHHHHHHHHHHHHhcC---------------CHHHHHHHHHHHH
Confidence 44455667777777777766531 13588999999999999999999753 2578999999999
Q ss_pred HHhHhhhcC
Q 003290 764 RFCRPIMTK 772 (833)
Q Consensus 764 ~~~~~l~~k 772 (833)
..+.++..+
T Consensus 205 ~~~~~i~~~ 213 (219)
T 4e81_A 205 QVSQKLMEI 213 (219)
T ss_dssp HHTHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998863
No 67
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=94.62 E-value=0.022 Score=65.13 Aligned_cols=81 Identities=14% Similarity=0.103 Sum_probs=55.8
Q ss_pred cHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHhCCCCCCCCCchhHHHhHHHHhc
Q 003290 299 KRDEFEQI-SAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQC 377 (833)
Q Consensus 299 tr~efe~l-~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg~~~~~~~npdeava~Gaa~~a 377 (833)
+|.+|-.. ++.+.-.+...++ .|+..|. .++.|.++||+++.+.+.+++.+.||.++..... .|+.|+|||+.|
T Consensus 371 ~~~~l~rAvlEgia~~~~~~~~-~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~-~e~~alGaA~lA 445 (508)
T 3ifr_A 371 TRGHLWRALLEAVALAFRHHVA-VLDDIGH---APQRFFASDGGTRSRVWMGIMADVLQRPVQLLAN-PLGSAVGAAWVA 445 (508)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-HHHHHTC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEEEC-CSTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHhcCC---CCCEEEEeCCcccCHHHHHHHHHHhCCeEEecCC-CCchHHHHHHHH
Confidence 56554332 2223333333332 3444454 4788999999999999999999999998866543 568899999999
Q ss_pred hhhcCCC
Q 003290 378 AILSPTF 384 (833)
Q Consensus 378 a~ls~~~ 384 (833)
+.-.+.+
T Consensus 446 ~~a~G~~ 452 (508)
T 3ifr_A 446 AIGGGDD 452 (508)
T ss_dssp HHHTCSS
T ss_pred HHHhCCC
Confidence 8766543
No 68
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=94.60 E-value=0.039 Score=62.80 Aligned_cols=81 Identities=16% Similarity=0.211 Sum_probs=55.0
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCCCCccEEEEeCCCCChHHHHHHHHHHhCCCCCCCCCchhHHHhHHHHhc
Q 003290 299 KRDEFEQISAPILERVKRPLEKALAET-GLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQC 377 (833)
Q Consensus 299 tr~efe~l~~~~~~~i~~~i~~~l~~~-~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg~~~~~~~npdeava~Gaa~~a 377 (833)
+|.++ +.-+++.+.-.++.+++.. ......++.|.++||+++.+.+.+++.+.+|.++... .+.|+.|+|||+.|
T Consensus 368 ~~~~~---~rAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~a~n~~~~q~~Adv~g~pV~~~-~~~e~~alGaA~la 443 (495)
T 2dpn_A 368 SRAHL---ARAALEGVAFQVRDVVLAMEEEAGVRLKVLKADGGMAQNRLFLKIQADLLGVPVAVP-EVTETTALGAALMA 443 (495)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHTTTSCCCCCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecccccCHHHHHHHHHHhCCeeEec-CCcccHHHHHHHHH
Confidence 45554 3334444444444444332 1112346789999999999999999999999888654 45669999999998
Q ss_pred hhhcCC
Q 003290 378 AILSPT 383 (833)
Q Consensus 378 a~ls~~ 383 (833)
+.-.+.
T Consensus 444 ~~a~G~ 449 (495)
T 2dpn_A 444 GVGAGA 449 (495)
T ss_dssp HHHHTS
T ss_pred HhhcCc
Confidence 765543
No 69
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=94.55 E-value=1.9 Score=46.90 Aligned_cols=67 Identities=12% Similarity=0.164 Sum_probs=42.3
Q ss_pred CCcCcEEEEecCccCHH----------------HHHHHHHHHHHcCCccEEeechhHHHHHHHhhhcCCCCCCCCceEEE
Q 003290 135 AAVVDCCIGIPVYFTDL----------------QRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAF 198 (833)
Q Consensus 135 ~~~~~~VITVP~~f~~~----------------qR~al~~Aa~~AGl~~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv 198 (833)
..+..+.|++|...+.. -+..+.+. .|++ +.+.|+..|+|++....... . .++++
T Consensus 147 ~~i~gigi~~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~~---~~~p-V~v~NDanaaalaE~~~g~~----~-~~~v~ 217 (380)
T 2hoe_A 147 SKLSALTVAAPGPIDTERGIIIDPRNFPLSQIPLANLLKEK---YGIE-VWVENDADMGAVGEKWYTKR----D-DSFAW 217 (380)
T ss_dssp CCCCEEEEEESSCEETTTTEECCCSSCTTBTSCHHHHHHHH---HCSE-EEEEEHHHHHHHHHHHHTTC----C-SCEEE
T ss_pred CcEEEEEEEeeccEECCCCEEeccCCCCCcCCChHHHHHHH---hCCC-EEEechHHHHHHHHHHhCCC----C-CcEEE
Confidence 45667788888754321 12333333 4776 68999999999886544321 2 67888
Q ss_pred EEeCCceEEEEEE
Q 003290 199 VDIGHASLQVCIA 211 (833)
Q Consensus 199 ~D~Gggt~dvsvv 211 (833)
+-+|.| +-.+++
T Consensus 218 l~~GtG-iG~giv 229 (380)
T 2hoe_A 218 ILTGKG-IGAGII 229 (380)
T ss_dssp EEESSS-CEEEEE
T ss_pred EEeCCc-eEEEEE
Confidence 888887 345554
No 70
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=94.53 E-value=0.02 Score=65.67 Aligned_cols=53 Identities=15% Similarity=0.141 Sum_probs=44.4
Q ss_pred CccEEEEeCCCCChHHHHHHHHHHhCCCCCCCCCchhHHHhHHHHhchhhcCCC
Q 003290 331 DVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTF 384 (833)
Q Consensus 331 ~i~~ViLvGG~sriP~v~~~l~~~fg~~~~~~~npdeava~Gaa~~aa~ls~~~ 384 (833)
.++.|.++||+++.+.+.+++.+.||.++... .+.|+.|+|||+.|+.-.+.+
T Consensus 425 ~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~-~~~e~~alGAA~lA~~a~G~~ 477 (520)
T 4e1j_A 425 NDTVLRVDGGMVASDWTMQRLSDLLDAPVDRP-VILETTALGVAWLAGSRAGVW 477 (520)
T ss_dssp --CCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCCCHHHHHHHHHHHHHHTSS
T ss_pred CcceEEEeCccccCHHHHHHHHHHhCCeEEec-CCCccHHHHHHHHHHHHcCCc
Confidence 47889999999999999999999999988654 467799999999998766544
No 71
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=94.38 E-value=0.024 Score=64.71 Aligned_cols=53 Identities=17% Similarity=0.306 Sum_probs=45.1
Q ss_pred CccEEEEeCCCCChHHHHHHHHHHhCCCCCCCCCchhHHHhHHHHhchhhcCCC
Q 003290 331 DVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTF 384 (833)
Q Consensus 331 ~i~~ViLvGG~sriP~v~~~l~~~fg~~~~~~~npdeava~Gaa~~aa~ls~~~ 384 (833)
.++.|.++||+++.+.+.+++.+.||.++... .+.|+.|+|||+.|+.-.+.+
T Consensus 401 ~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA~~a~G~~ 453 (510)
T 2p3r_A 401 RLHALRVDGGAVANNFLMQFQSDILGTRVERP-EVREVTALGAAYLAGLAVGFW 453 (510)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHHHHHHHTSS
T ss_pred CccEEEEeCchhcCHHHHHHHHHHhCCceEec-CCCCcHHHHHHHHHHHHhCcc
Confidence 47889999999999999999999999888654 466799999999998765543
No 72
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=94.00 E-value=0.066 Score=61.03 Aligned_cols=81 Identities=16% Similarity=0.239 Sum_probs=56.5
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHhCCCCCCCCCchhHHHhHHHHhc
Q 003290 299 KRDEFEQ-ISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQC 377 (833)
Q Consensus 299 tr~efe~-l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg~~~~~~~npdeava~Gaa~~a 377 (833)
+|.+|-. +++.+.-.+...++.+-+..+. .++.|.++||+++.+.+.+++.+.||.++... .+.|+.|+|||+.|
T Consensus 373 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~lA 448 (504)
T 2d4w_A 373 NRNHIARAALEATAFQSREVVDAMNADSGV---DLTELRVDGGMVANELLMQFQADQLGVDVVRP-KVAETTALGAAYAA 448 (504)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CcceEEEeCCcccCHHHHHHHHHHhCCeEEeC-CCCcchHHHHHHHH
Confidence 5655443 3333444444444433233454 36889999999999999999999999888654 45679999999999
Q ss_pred hhhcCC
Q 003290 378 AILSPT 383 (833)
Q Consensus 378 a~ls~~ 383 (833)
+.-.+.
T Consensus 449 ~~~~G~ 454 (504)
T 2d4w_A 449 GIAVGF 454 (504)
T ss_dssp HHHHTS
T ss_pred HhhcCc
Confidence 876554
No 73
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=93.96 E-value=0.16 Score=45.69 Aligned_cols=80 Identities=15% Similarity=0.221 Sum_probs=62.7
Q ss_pred hhhcchHHHHHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHH
Q 003290 681 EFTDRSSVIDQLAYCINSYREAALSSDPKFDHIDIAEKQKVLNECADAEAWVREKKQQQDALPKYAAPVLLLGDVRRKAE 760 (833)
Q Consensus 681 e~~~rp~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~ 760 (833)
-.+.|-++.+.+...|..+++.+... ..-..++.+++..|...|+++..||+.. +. -...+|+.+++
T Consensus 12 ~~re~iEarN~aEsliy~~e~~L~e~-~~~dkl~~eek~~I~~~i~el~~~L~~~---~~---------ad~e~ik~k~~ 78 (120)
T 2p32_A 12 SGLVPRGSHMGLESYAFNLKQTIEDE-KLKDKISPEDKKKIEDKCDEILKWLDSN---QT---------AEKEEFEHQQK 78 (120)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHHHTCT-TTGGGSCHHHHHHHHHHHHHHHHHHHHH---TT---------CCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhch-hhhccCCHHHHHHHHHHHHHHHHHHHcC---Cc---------CCHHHHHHHHH
Confidence 45677888999999999999888541 1224699999999999999999999741 11 11368999999
Q ss_pred HHHHHhHhhhcCC
Q 003290 761 ALDRFCRPIMTKP 773 (833)
Q Consensus 761 ~l~~~~~~l~~k~ 773 (833)
+|+..+.+|+.+.
T Consensus 79 eL~~~~~~i~~k~ 91 (120)
T 2p32_A 79 DLEGLANPIISKL 91 (120)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998754
No 74
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=93.66 E-value=0.086 Score=60.04 Aligned_cols=82 Identities=10% Similarity=0.254 Sum_probs=55.9
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCCCCc-cEEEEeCCCCChHHHHHHHHHHhCCCCCCCCCchhHHHhHHHHh
Q 003290 299 KRDEFEQ-ISAPILERVKRPLEKALAETGLSVEDV-HMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQ 376 (833)
Q Consensus 299 tr~efe~-l~~~~~~~i~~~i~~~l~~~~~~~~~i-~~ViLvGG~sriP~v~~~l~~~fg~~~~~~~npdeava~Gaa~~ 376 (833)
+|.++-. +++.+.-.+...++..-+..+. .+ +.|.++||+++.+.+.+++.+.||.++... ...|+.|+|||+.
T Consensus 376 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~~i~~~GG~a~s~~~~Q~~Adv~g~pV~~~-~~~e~~alGaA~l 451 (503)
T 2w40_A 376 ERSHIVRALLEGIAFQLNEIVDSLTSDMGI---EMLHVLRCDGGMTKNKPFMQFNSDIINTKIEVS-KYKEVTSLGAAVL 451 (503)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---SCCSCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CccceEEEeCccccCHHHHHHHHHHHCCeEEec-CCCcchHHHHHHH
Confidence 4555433 3333333444444332222453 35 779999999999999999999999888654 4556999999999
Q ss_pred chhhcCCC
Q 003290 377 CAILSPTF 384 (833)
Q Consensus 377 aa~ls~~~ 384 (833)
|+.-.+.+
T Consensus 452 a~~~~G~~ 459 (503)
T 2w40_A 452 AGLEVKIW 459 (503)
T ss_dssp HHHHTTCS
T ss_pred HHHHhCcc
Confidence 98766543
No 75
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=93.43 E-value=0.056 Score=61.38 Aligned_cols=78 Identities=13% Similarity=0.057 Sum_probs=51.5
Q ss_pred EecHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHhCCCCCCCCCchhHHHhHHHH
Q 003290 297 FIKRDEFEQ-ISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCAL 375 (833)
Q Consensus 297 ~itr~efe~-l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg~~~~~~~npdeava~Gaa~ 375 (833)
.-+|.+|-. +++.+.-.+...++..-+..|. .++.|.++||+++.+.+.+++.+.||.++.... .|+.|+|||+
T Consensus 361 ~~t~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~--~e~~alGaa~ 435 (489)
T 2uyt_A 361 PESDAELARCIFDSLALLYADVLHELAQLRGE---DFSQLHIVGGGCQNTLLNQLCADACGIRVIAGP--VEASTLGNIG 435 (489)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEECC--TTHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEeCChhhhHHHHHHHHHHHCCeeecCC--ccHhHHHHHH
Confidence 345665543 2233333333333332222443 468899999999999999999999999886543 5899999965
Q ss_pred hchh
Q 003290 376 QCAI 379 (833)
Q Consensus 376 ~aa~ 379 (833)
.|+.
T Consensus 436 ~A~~ 439 (489)
T 2uyt_A 436 IQLM 439 (489)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 76
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=93.13 E-value=0.23 Score=44.07 Aligned_cols=75 Identities=19% Similarity=0.395 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHHHHHHHh
Q 003290 687 SVIDQLAYCINSYREAALSSDPKFDHIDIAEKQKVLNECADAEAWVREKKQQQDALPKYAAPVLLLGDVRRKAEALDRFC 766 (833)
Q Consensus 687 ~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~ 766 (833)
++.+.+.+.|..+++.+.. .+.-..++.+++..|...|.++..||+.....- ..+|+.+++.|+..+
T Consensus 4 EarN~aE~~iy~~e~~L~~-~e~~~kl~~~ek~~i~~~i~~l~~~L~~~~~ad------------~~~i~~~~~~L~~~~ 70 (113)
T 1ud0_A 4 RGSHMLESYAFNMKATVED-EKLQGKINDEDKQKILDKCNEIISWLDKNQTAE------------KEEFEHQQKELEKVC 70 (113)
T ss_dssp CCHHHHHHHHHHHHHHHTS-GGGTTTSCHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcc-hhhhccCCHHHHHHHHHHHHHHHHHHHcCCccC------------HHHHHHHHHHHHHHH
Confidence 3456777888888887742 112246999999999999999999997432111 257999999999999
Q ss_pred HhhhcCCC
Q 003290 767 RPIMTKPK 774 (833)
Q Consensus 767 ~~l~~k~k 774 (833)
.+|..+.-
T Consensus 71 ~~i~~~~~ 78 (113)
T 1ud0_A 71 NPIITKLY 78 (113)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 99987543
No 77
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=92.98 E-value=7.4 Score=41.34 Aligned_cols=69 Identities=16% Similarity=0.088 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHh---CCCCCCCC---CchhHHHhHHHHhchhhcC
Q 003290 309 PILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFF---GKEPRRTM---NASECVARGCALQCAILSP 382 (833)
Q Consensus 309 ~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~f---g~~~~~~~---npdeava~Gaa~~aa~ls~ 382 (833)
-+.+.+...+.++++..+ ++.|+|.||.+....+++.|.+.+ |.++..+. -.|..+++|+|.+.....+
T Consensus 232 ~l~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~g 306 (334)
T 3eno_A 232 TAFAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKSG 306 (334)
T ss_dssp HHHHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHcC
Confidence 344555566666666655 478999999999999999999887 54443332 4678899999876544433
No 78
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=92.39 E-value=8.3 Score=43.91 Aligned_cols=203 Identities=12% Similarity=0.058 Sum_probs=100.7
Q ss_pred CcCcEEEEe-cCccCHHHHHHH--HHHHHHcCCccEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEEE
Q 003290 136 AVVDCCIGI-PVYFTDLQRRAV--IDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAG 212 (833)
Q Consensus 136 ~~~~~VITV-P~~f~~~qR~al--~~Aa~~AGl~~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~ 212 (833)
.+.-+++|. |.+|+....-.. +--|...|++++. |+.-.|=+++..... ... .+ +++-+-||++.+-.
T Consensus 72 ~id~ia~~~gPG~~~~l~vg~~~ak~la~~~~~p~~~-v~h~~aH~~~~~~~~-~~~--~p---~~l~vsGg~t~~~~-- 142 (540)
T 3en9_A 72 EIDLIAFSQGPGLGPSLRVTATVARTLSLTLKKPIIG-VNHCIAHIEIGKLTT-EAE--DP---LTLYVSGGNTQVIA-- 142 (540)
T ss_dssp GCCEEEEEEESSCHHHHHHHHHHHHHHHHHHTCCEEE-EEHHHHHHHHHHHHS-SCS--SC---EEEEECSSCEEEEE--
T ss_pred HCcEEEEecCCCchhhHHHHHHHHHHHHHHhCCCeeE-eccHHHHHHHHHHhc-CCC--CC---cEEEEcCCCcEEEE--
Confidence 466676776 777765432221 1123344766554 555554443322222 221 23 55556677776544
Q ss_pred EeCCeEEEEEeeCCCCcccHHHHHHHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCCCceeEEEeccccCc
Q 003290 213 FKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLMEEK 292 (833)
Q Consensus 213 ~~~~~~~vl~~~~d~~lGG~~~D~~l~~~l~~~~~~k~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~~~~ie~l~~~~ 292 (833)
+.++.+++++...|.. -|+.||..= . ..++....-+ .+.+| |..... .+.++....+.
T Consensus 143 ~~~~~~~~lg~t~d~s-~G~~~D~~a-----~----~lgl~~~gg~-~ie~l---A~~g~~--------~~~~p~~~~~~ 200 (540)
T 3en9_A 143 YVSKKYRVFGETLDIA-VGNCLDQFA-----R----YVNLPHPGGP-YIEEL---ARKGKK--------LVDLPYTVKGM 200 (540)
T ss_dssp EETTEEEEEEEBSSSC-HHHHHHHHH-----H----HTTCCSSCHH-HHHHH---HHTCCC--------CCCCCCCEETT
T ss_pred EeCCceEEEeeccchH-hHHHHHHHH-----H----HcCCCCCCHH-HHHHH---HHcCCc--------cCcCCCCCCCc
Confidence 4468899999876544 456666422 1 1233322212 22222 222110 11111111222
Q ss_pred cceEE-------------ecHHHHHHHHH-HHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHh---
Q 003290 293 DVRGF-------------IKRDEFEQISA-PILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFF--- 355 (833)
Q Consensus 293 d~~~~-------------itr~efe~l~~-~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~f--- 355 (833)
+|++. .+..++-..++ -+++.+...+.++++..+ ++.|+|+||.+....+++.|.+.+
T Consensus 201 ~~sfsgl~~~~~~~~~~~~~~~~ia~~fq~~~~~~l~~~~~~a~~~~~-----~~~~~~~GGVa~N~~l~~~l~~~~~~~ 275 (540)
T 3en9_A 201 DIAFSGLLTAAMRAYDAGERLEDICYSLQEYAFSMLTEITERALAHTN-----KGEVMLVGGVAANNRLREMLKAMCEGQ 275 (540)
T ss_dssp EECCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHHHHHHT
T ss_pred ceecHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCeEEEeCcHHhHHHHHHHHHHHHHhc
Confidence 32210 01222221112 334445555666666665 468999999999999999999876
Q ss_pred CCCCCCCC---CchhHHHhHHH
Q 003290 356 GKEPRRTM---NASECVARGCA 374 (833)
Q Consensus 356 g~~~~~~~---npdeava~Gaa 374 (833)
|.++..+. -.|.++..|.+
T Consensus 276 ~~~~~~p~~~~~~Dngamia~~ 297 (540)
T 3en9_A 276 NVDFYVPPKEFCGDNGAMIAWL 297 (540)
T ss_dssp TCEEECCCHHHHSSCHHHHHHH
T ss_pred CCEEEeCCCcCCCCCHHHHHHH
Confidence 33443332 23445555544
No 79
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=92.39 E-value=12 Score=38.97 Aligned_cols=64 Identities=11% Similarity=-0.017 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCC--hHHHHHHHHHHhCCCCCCCCCchhHHHhHHHHhch
Q 003290 306 ISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSR--VPAIIKILTEFFGKEPRRTMNASECVARGCALQCA 378 (833)
Q Consensus 306 l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr--iP~v~~~l~~~fg~~~~~~~npdeava~Gaa~~aa 378 (833)
.+..++++....+-..+...-. . +...|+|.||.++ .|.+.+.+++.+- -|+.+.++||+++|.
T Consensus 227 ~A~~i~~~~~~~L~~~l~~l~~-~-~p~~VvlgGgv~~~~~~~l~~~l~~~i~-------~~~~~~~~GAa~la~ 292 (305)
T 1zc6_A 227 EADALLRQAGEDAWAIARALDP-Q-DELPVALCGGLGQALRDWLPPGFRQRLV-------APQGDSAQGALLLLQ 292 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCT-T-CCSCEEEESHHHHHTGGGSCHHHHHHCC-------CCSSCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-C-CCCeEEEECCchHhHHHHHHHHHHhhcc-------CCCCCHHHHHHHHHh
Confidence 3445666666666655555322 2 6678999998864 5667777766531 145678999999874
No 80
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=91.88 E-value=2.4 Score=44.15 Aligned_cols=68 Identities=6% Similarity=-0.088 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCC-CccEEEEeCCCCCh--HHHHHHHHHHhCCCCCCCCCchhHHHhHHHHhchh
Q 003290 305 QISAPILERVKRPLEKALAETGLSVE-DVHMVEVVGSSSRV--PAIIKILTEFFGKEPRRTMNASECVARGCALQCAI 379 (833)
Q Consensus 305 ~l~~~~~~~i~~~i~~~l~~~~~~~~-~i~~ViLvGG~sri--P~v~~~l~~~fg~~~~~~~npdeava~Gaa~~aa~ 379 (833)
.++..++++....+-..+ . +..- +...|+|.||.++. +.+++.+++.. .+ ...|..+...||++++..
T Consensus 210 ~~A~~i~~~~~~~La~~i-~--~~~~~~p~~vvlgGGv~~~~~~~l~~~l~~~~-~~---i~~~~~a~~~GA~~la~~ 280 (291)
T 1zbs_A 210 PAVYSLVQNSFDDFLVRN-V--LRYNRPDLPLHFIGSVAFHYREVLSSVIKKRG-LT---LGSVLQSPMEGLIQYHHN 280 (291)
T ss_dssp HHHHHHHHHHHHHHHHHH-T--GGGCCTTSCEEEESHHHHHTHHHHHHHHHHTT-CC---EEEEESCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-h--cccCCCCceEEEECchHHhhHHHHHHHHHHcC-Ce---ecccCcCHHHHHHHHHHh
Confidence 344455555555555555 2 2222 56789999998775 66666665532 11 223567889999998854
No 81
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=91.84 E-value=0.37 Score=48.53 Aligned_cols=72 Identities=11% Similarity=0.098 Sum_probs=55.7
Q ss_pred hcchHHHHHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHHHH
Q 003290 683 TDRSSVIDQLAYCINSYREAALSSDPKFDHIDIAEKQKVLNECADAEAWVREKKQQQDALPKYAAPVLLLGDVRRKAEAL 762 (833)
Q Consensus 683 ~~rp~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l 762 (833)
.++-++.+.|.+.+..++..+... -..++++++..+...+++++.||+.. ...+++.++++|
T Consensus 139 ~e~~e~kn~le~~i~~~~~~l~~~---~~~~~~~~k~~i~~~l~~~~~wl~~~---------------d~~~~~~~~~~L 200 (227)
T 1u00_A 139 RMLAEQKVEAARVLESLHGALAAD---AALLSAAERQVIDDAAAHLSEVAQGD---------------DVDAIEQAIKNV 200 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHTTSS---------------CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh---hccCCHHHHHHHHHHHHHHHHHHhcC---------------CHHHHHHHHHHH
Confidence 345566677777777777766442 13589999999999999999999721 147899999999
Q ss_pred HHHhHhhhcC
Q 003290 763 DRFCRPIMTK 772 (833)
Q Consensus 763 ~~~~~~l~~k 772 (833)
+..+.++..+
T Consensus 201 ~~~~~~i~~r 210 (227)
T 1u00_A 201 DKQTQDFAAR 210 (227)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998754
No 82
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=89.45 E-value=0.83 Score=53.08 Aligned_cols=71 Identities=13% Similarity=0.112 Sum_probs=53.7
Q ss_pred chHHHHHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHHHHHH
Q 003290 685 RSSVIDQLAYCINSYREAALSSDPKFDHIDIAEKQKVLNECADAEAWVREKKQQQDALPKYAAPVLLLGDVRRKAEALDR 764 (833)
Q Consensus 685 rp~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~ 764 (833)
+-++.+.+...+..++..+... -..+++++++++.+.+++++.||+.. ...+|+.++++|++
T Consensus 532 ~~~~~n~~e~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~---------------~~~~~~~~~~~l~~ 593 (605)
T 4b9q_A 532 LVQTRNQGDHLLHSTRKQVEEA---GDKLPADDKTAIESALTALETALKGE---------------DKAAIEAKMQELAQ 593 (605)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHHHSS---------------CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhh---hhhCCHHHHHHHHHHHHHHHHHHhcC---------------CHHHHHHHHHHHHH
Confidence 3444556666666666666431 13588999999999999999999732 14789999999999
Q ss_pred HhHhhhcCC
Q 003290 765 FCRPIMTKP 773 (833)
Q Consensus 765 ~~~~l~~k~ 773 (833)
.+.+++.|.
T Consensus 594 ~~~~~~~~~ 602 (605)
T 4b9q_A 594 VSQKLMEIA 602 (605)
T ss_dssp HTHHHHHHC
T ss_pred HHHHHHHHH
Confidence 999998754
No 83
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=89.00 E-value=0.76 Score=54.08 Aligned_cols=78 Identities=19% Similarity=0.139 Sum_probs=58.6
Q ss_pred hhhcchHHHHHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHH
Q 003290 681 EFTDRSSVIDQLAYCINSYREAALSSDPKFDHIDIAEKQKVLNECADAEAWVREKKQQQDALPKYAAPVLLLGDVRRKAE 760 (833)
Q Consensus 681 e~~~rp~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~ 760 (833)
...+|-++.+.|.+.+..++..+... -...+++++++++.+.+++++.||.+.- .+ -+..+++.|++
T Consensus 545 ~~~~~~~~~n~le~~i~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~~~wl~~~~--~~---------~~~~~~~~~~~ 611 (675)
T 3d2f_A 545 LVAETEDRKNTLEEYIYTLRGKLEEE--YAPFASDAEKTKLQGMLNKAEEWLYDEG--FD---------SIKAKYIAKYE 611 (675)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTT--TGGGSCHHHHHHHHHHHHHHHHHTTTGG--GG---------CCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHhcCC--ch---------hhHHHHHHHHH
Confidence 33445677788888888888888541 2246899999999999999999996421 11 13468999999
Q ss_pred HHHHHhHhhhc
Q 003290 761 ALDRFCRPIMT 771 (833)
Q Consensus 761 ~l~~~~~~l~~ 771 (833)
+|+..+.++..
T Consensus 612 ~l~~~~~~i~~ 622 (675)
T 3d2f_A 612 ELASLGNIIRG 622 (675)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998874
No 84
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=88.79 E-value=1.5 Score=46.92 Aligned_cols=81 Identities=20% Similarity=0.261 Sum_probs=49.1
Q ss_pred HHHHHHHHHcCCccEEeechhHHHHHHHhhhcCCCCC-CCCceEEEEEeCCceEEEEEEEE--eC--CeEEEEEeeCCCC
Q 003290 154 RAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPE-NDQLNVAFVDIGHASLQVCIAGF--KK--GQLKILGHSFDRS 228 (833)
Q Consensus 154 ~al~~Aa~~AGl~~~~li~EptAaAl~y~~~~~~~~~-~~~~~vlv~D~Gggt~dvsvv~~--~~--~~~~vl~~~~d~~ 228 (833)
..+..+-+..|+++ .+|+...=|.+.|.--...++. .....++++|+|||+|+++++.- .. +.+ .. ....+
T Consensus 106 ~fl~~v~~~tGi~i-eVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~--~~-~~Slp 181 (343)
T 3cer_A 106 EFEDEIERILGVRP-EVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQV--QG-AFSMN 181 (343)
T ss_dssp HHHHHHHHHHSSCC-EECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSC--SE-EEEES
T ss_pred HHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCccccc--ce-eEEEe
Confidence 33444555679986 6777666666655322222331 01356999999999999999653 11 111 11 22468
Q ss_pred cccHHHHHHH
Q 003290 229 VGGRDFDEVL 238 (833)
Q Consensus 229 lGG~~~D~~l 238 (833)
+|+..+.+.+
T Consensus 182 lG~v~lt~~~ 191 (343)
T 3cer_A 182 IGSVRMTERH 191 (343)
T ss_dssp CCHHHHHHHT
T ss_pred hhHHHHHHHh
Confidence 9999887765
No 85
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=88.71 E-value=0.23 Score=56.11 Aligned_cols=72 Identities=13% Similarity=0.010 Sum_probs=53.3
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHH-hCCCCCCCCCchhHHHhHHHHhchhh
Q 003290 304 EQISAPILER--VKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEF-FGKEPRRTMNASECVARGCALQCAIL 380 (833)
Q Consensus 304 e~l~~~~~~~--i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~-fg~~~~~~~npdeava~Gaa~~aa~l 380 (833)
..++.-+++. +.-.++.+++... ..+.|.++||+++.|.+.+++.+. ||.++.+.. ..|+.|+|||+.|+.-
T Consensus 362 ~~l~RA~lE~~Gia~~~r~~l~~~~----~~~~i~~~GG~a~s~~w~Qi~ADv~~g~pV~~~~-~~e~~alGAA~lA~~a 436 (482)
T 3h6e_A 362 DWFERRAAACLYAALVADTALDLIG----STGRILVEGRFAEADVFVRALASLRPDCAVYTAN-AHNDVSFGALRLIDPG 436 (482)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTT----CCSEEEEESGGGGCHHHHHHHHHHSTTSEEEEES-SCCCTTGGGHHHHCTT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhc----CCCeEEEeCCcccCHHHHHHHhhhcCCCeEEEcC-CCchHHHHHHHHhCcc
Confidence 3455555553 4445555665532 237899999999999999999999 998886654 4568899999999754
No 86
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=88.63 E-value=2.7 Score=47.66 Aligned_cols=113 Identities=19% Similarity=0.226 Sum_probs=64.3
Q ss_pred eCHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEecCccCHHHH------HHHHHHHHHcCCccEEeechhHHHHHHH-hhh
Q 003290 112 FTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQR------RAVIDAATIAGLHPLRLFHETTATALAY-GIY 184 (833)
Q Consensus 112 ~~~eel~a~~L~~l~~~ae~~~~~~~~~~VITVP~~f~~~qR------~al~~Aa~~AGl~~~~li~EptAaAl~y-~~~ 184 (833)
++++ .+...+..|+...+..-+..+.++.+ +-|..-| ..+..+-+..|+++ .+|+...=|.+.| |+.
T Consensus 57 Ls~e-ai~r~~~~L~~f~~~~~~~~v~~v~~----vATsA~R~A~N~~~fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~ 130 (513)
T 1u6z_A 57 LSEE-AMTRGLNCLSLFAERLQGFSPASVCI----VGTHTLRQALNATDFLKRAEKVIPYPI-EIISGNEEARLIFMGVE 130 (513)
T ss_dssp BCHH-HHHHHHHHHHHHHHHTTTCCGGGEEE----EECHHHHHCTTHHHHHHHHTTTCSSCE-EECCHHHHHHHHHHHHH
T ss_pred cCHH-HHHHHHHHHHHHHHHHHhCCCCEEEE----EecHHHHcCcCHHHHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHH
Confidence 4443 44445555555544443444554332 2244444 33344444569986 6777666555555 433
Q ss_pred cCCCCCCCCceEEEEEeCCceEEEEEEEEeCCeEEEEEeeCCCCcccHHHHHHH
Q 003290 185 KTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVL 238 (833)
Q Consensus 185 ~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~d~~lGG~~~D~~l 238 (833)
. .++. ....||+|+|||+|.++++ .++.+. .. ...++|...+.+.+
T Consensus 131 ~-~~~~--~~~~lviDIGGGStEl~~~--~~~~~~-~~--~Sl~lG~vrlte~f 176 (513)
T 1u6z_A 131 H-TQPE--KGRKLVIDIGGGSTELVIG--ENFEPI-LV--ESRRMGCVSFAQLY 176 (513)
T ss_dssp H-HSCC--CSCEEEEEECSSCEEEEEE--ETTEEE-EE--EEESCCHHHHHHHH
T ss_pred h-hccC--CCCEEEEEECCCcEEEEEE--eCCeee-EE--EEEeccHHHHHHHH
Confidence 3 2321 2269999999999999986 444442 22 24689998887665
No 87
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=88.37 E-value=0.78 Score=51.12 Aligned_cols=61 Identities=8% Similarity=-0.036 Sum_probs=41.7
Q ss_pred cCccCHHHHHHHHHHHHHcCCc--cEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEEE
Q 003290 145 PVYFTDLQRRAVIDAATIAGLH--PLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAG 212 (833)
Q Consensus 145 P~~f~~~qR~al~~Aa~~AGl~--~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~ 212 (833)
|.+-...-++.|.+|...-|++ ++.|+|+.+|++++-+... +..++.+=+|-|+=-+.+..
T Consensus 167 ~~~~g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~-------~~~~iglIlGTG~na~yve~ 229 (451)
T 1bdg_A 167 DGVEGHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALED-------PKCAVGLIVGTGTNVAYIED 229 (451)
T ss_dssp BTCTTSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTC-------TTEEEEEEESSSEEEEEEEE
T ss_pred CCCCCCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccC-------CCcEEEEEEeCCcceEEEEc
Confidence 4333445567777887766776 3589999999998876542 35677777888866555544
No 88
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=86.33 E-value=1.1 Score=52.07 Aligned_cols=73 Identities=14% Similarity=0.151 Sum_probs=55.2
Q ss_pred hhcchHHHHHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHHH
Q 003290 682 FTDRSSVIDQLAYCINSYREAALSSDPKFDHIDIAEKQKVLNECADAEAWVREKKQQQDALPKYAAPVLLLGDVRRKAEA 761 (833)
Q Consensus 682 ~~~rp~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~ 761 (833)
..++-++.+.+...+..++..+... -..+++++++.+.+.+++++.||+.. ...+++.++++
T Consensus 529 ~~~~~~~~n~~e~~~~~~~~~l~~~---~~~~~~~~~~~i~~~~~~~~~~l~~~---------------~~~~~~~~~~~ 590 (605)
T 2kho_A 529 FDELVQTRNQGDHLLHSTRKQVEEA---GDKLPADDKTAIESALTALETALKGE---------------DKAAIEAKMQE 590 (605)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHTTSS---------------CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh---hccCCHHHHHHHHHHHHHHHHHHhcC---------------CHHHHHHHHHH
Confidence 3344555666677777776666441 23589999999999999999999721 35789999999
Q ss_pred HHHHhHhhhcC
Q 003290 762 LDRFCRPIMTK 772 (833)
Q Consensus 762 l~~~~~~l~~k 772 (833)
|+..+.++..+
T Consensus 591 l~~~~~~~~~~ 601 (605)
T 2kho_A 591 LAQVSQKLMEI 601 (605)
T ss_dssp HHTTCHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998764
No 89
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=82.80 E-value=0.75 Score=39.58 Aligned_cols=21 Identities=29% Similarity=0.384 Sum_probs=18.8
Q ss_pred CeEEEEEcCccceEEEEEECC
Q 003290 1 MSVVGFDLGNESCIVAVARQR 21 (833)
Q Consensus 1 m~viGID~GTt~s~va~~~~~ 21 (833)
|.++|||||+..+.||+.++.
T Consensus 1 mriLglD~G~kriGvAvsd~~ 21 (98)
T 1iv0_A 1 MRVGALDVGEARIGLAVGEEG 21 (98)
T ss_dssp CCEEEEEESSSEEEEEEECSC
T ss_pred CcEEEEEeCCCEEEEEEEeCC
Confidence 789999999999999998753
No 90
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=80.61 E-value=5.5 Score=44.99 Aligned_cols=73 Identities=16% Similarity=0.201 Sum_probs=45.6
Q ss_pred HHHHHHHHHcCCccEEeechhHHHHHHH-hhhcCCCCCCCCceEEEEEeCCceEEEEEEEEeCCeEEEEEeeCCCCcccH
Q 003290 154 RAVIDAATIAGLHPLRLFHETTATALAY-GIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGR 232 (833)
Q Consensus 154 ~al~~Aa~~AGl~~~~li~EptAaAl~y-~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~d~~lGG~ 232 (833)
..+..+-+..|+++ .+|+...=|.+.| |+.. .++ ....||+|+|||+|.++++. ++.+. .....++|.-
T Consensus 104 ~fl~~i~~~tG~~i-evIsG~EEA~l~~~gv~~-~~~---~~~~lvvDIGGGStEl~~~~--~~~~~---~~~Sl~lG~v 173 (508)
T 3hi0_A 104 DFIREAEAILGCEI-EVLSGEKEALYSAYGVIS-GFY---QPDGIAGDLGGGSLELIDIK--DKSCG---EGITLPLGGL 173 (508)
T ss_dssp HHHHHHHHHHTSCE-EECCHHHHHHHHHHHHHH-HSS---SCEEEEEEECSSCEEEEEEE--TTEEC---CCEEESCCHH
T ss_pred HHHHHHHHHHCCCe-EEecHHHHHHHHHHHHHh-cCC---CCCeEEEEeCCCceEEEEee--CCeee---eEEEecceEE
Confidence 34455555679996 6676655555544 4433 233 23459999999999999965 44331 1224678887
Q ss_pred HHHH
Q 003290 233 DFDE 236 (833)
Q Consensus 233 ~~D~ 236 (833)
.+.+
T Consensus 174 rl~e 177 (508)
T 3hi0_A 174 RLSE 177 (508)
T ss_dssp HHHH
T ss_pred ehhh
Confidence 7764
No 91
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=80.46 E-value=27 Score=38.95 Aligned_cols=59 Identities=12% Similarity=-0.036 Sum_probs=43.0
Q ss_pred CHHHHHHHHHHHHHcCCc--cEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEEEEe
Q 003290 149 TDLQRRAVIDAATIAGLH--PLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFK 214 (833)
Q Consensus 149 ~~~qR~al~~Aa~~AGl~--~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~ 214 (833)
...-+..+.+|.+.-|++ ++.++|+.+|++++.++.. +..++.+=+|-|+=-+.+..+.
T Consensus 184 G~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~-------~~~~iglIlGTG~N~~y~e~~~ 244 (485)
T 3o8m_A 184 GHDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTD-------PQTKMGIIIGTGVNGAYYDVVS 244 (485)
T ss_dssp TSBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHC-------TTEEEEEEESSSEEEEEEEEGG
T ss_pred CccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCC-------CCcEEEEEEecCcceEEEeecc
Confidence 455678888999888876 4789999999999876542 3466666678887666665543
No 92
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=79.69 E-value=2.3 Score=45.67 Aligned_cols=47 Identities=15% Similarity=0.202 Sum_probs=29.0
Q ss_pred CCccEEeechhHHHHHHHhh-hc--CCCCCCCCceEEEEEeCCceEEEEEE
Q 003290 164 GLHPLRLFHETTATALAYGI-YK--TDLPENDQLNVAFVDIGHASLQVCIA 211 (833)
Q Consensus 164 Gl~~~~li~EptAaAl~y~~-~~--~~~~~~~~~~vlv~D~Gggt~dvsvv 211 (833)
|+. +++|+...=|.+.|.- .. ..+.....+.++|+|+|||+|.+++.
T Consensus 108 g~~-v~VIsG~eEa~~~~~gv~~~l~~~~~~~~~t~~v~DiGGGStei~~~ 157 (353)
T 3aap_A 108 LVE-AKTITGNDEALFDWLAVNYKLDTLKSVQNKSVGVMDMGGASVQIVFP 157 (353)
T ss_dssp EEE-EEECCHHHHHHHHHHHHHHHTTCSSSCCSSCEEEEEECSSEEEEEEE
T ss_pred CCe-EEECChHHHHHHHHHHHHHHhhhccccccccEEEEEeCCCceEEEEe
Confidence 554 5777766555554421 11 11111123579999999999999987
No 93
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=79.67 E-value=15 Score=38.19 Aligned_cols=51 Identities=12% Similarity=0.178 Sum_probs=33.3
Q ss_pred HHHHHHHHHHcCCccEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEE
Q 003290 153 RRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIA 211 (833)
Q Consensus 153 R~al~~Aa~~AGl~~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv 211 (833)
++.+.+. .|++ +.+.|+..|+|++-....... ..++++++-+|.| +-.+++
T Consensus 90 ~~~l~~~---~~~p-V~v~NDanaaalaE~~~G~~~---~~~~~~~l~~GtG-iG~gii 140 (302)
T 3epq_A 90 LQTVXNE---MXIP-VGFSTDVNAAALGEFLFGEAX---GLDSCLYITIGTG-IGAGAI 140 (302)
T ss_dssp HHHHHHH---HCSC-EEEEEHHHHHHHHHHHHSTTT---TCSCEEEEEESSS-EEEEEE
T ss_pred HHHHHHH---hCCC-EEEechhHHHHHHHHHhCCCC---CCCcEEEEEECCc-eEEEEE
Confidence 4444443 4887 689999999999865543211 2467888888876 444554
No 94
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=79.00 E-value=22 Score=37.27 Aligned_cols=44 Identities=14% Similarity=0.009 Sum_probs=29.4
Q ss_pred cCCccEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEE
Q 003290 163 AGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIA 211 (833)
Q Consensus 163 AGl~~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv 211 (833)
.|++ +.+.|+..|+|++....... ....+++++-+|.| +-.+++
T Consensus 120 ~~~p-v~v~NDa~aaalgE~~~g~~---~~~~~~v~l~~GtG-iG~giv 163 (327)
T 2ap1_A 120 LDRD-VRLDNDANCFALSEAWDDEF---TQYPLVMGLILGTG-VGGGLV 163 (327)
T ss_dssp HTSC-EEEEEHHHHHHHHHHTSTTG---GGCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEecHHHHHHHHHHHhCcC---CCCCcEEEEEECCc-EEEEEE
Confidence 4776 68999999999875433211 02467888889988 445553
No 95
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=77.44 E-value=63 Score=32.55 Aligned_cols=45 Identities=16% Similarity=0.244 Sum_probs=29.7
Q ss_pred cCCccEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEE
Q 003290 163 AGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIA 211 (833)
Q Consensus 163 AGl~~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv 211 (833)
.|++ +.+.|+..|+|++......... ....++++-+|.| +-.+++
T Consensus 114 ~~~p-V~v~NDanaaalaE~~~g~~~~--~~~~~~~l~~GtG-IG~giv 158 (267)
T 1woq_A 114 LGRP-VEVINDADAAGLAEARYGAGAG--VKGTVLVITLGTG-IGSAFI 158 (267)
T ss_dssp HTSC-EEEEEHHHHHHHHHHHHSTTTT--CCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEeehhHHHHHHHHHhCCCCC--CCCcEEEEEECcc-eEEEEE
Confidence 4776 6899999999998654432111 1235778888887 555554
No 96
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=75.04 E-value=9.2 Score=43.00 Aligned_cols=43 Identities=9% Similarity=-0.026 Sum_probs=32.6
Q ss_pred CcEEEEecCccCHHHHHHHHHHHHHcCCccEEeec-hhHHHHHH
Q 003290 138 VDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFH-ETTATALA 180 (833)
Q Consensus 138 ~~~VITVP~~f~~~qR~al~~Aa~~AGl~~~~li~-EptAaAl~ 180 (833)
..++.-+|..++...-.++.+++...|+++...|- --.++.++
T Consensus 131 ~~~I~v~~~~i~~~d~a~~in~a~~~g~~i~~~i~q~dd~vli~ 174 (607)
T 1nbw_A 131 EGWIVLIDDAVDFLDAVWWLNEALDRGINVVAAILKKDDGVLVN 174 (607)
T ss_dssp TCEEEEECSSSCHHHHHHHHHHHHHTTCCEEEEEESSSCHHHHH
T ss_pred CCEEEECCCccCHHHHHHHHHHHHHcCCcEEEEEEecCCEEEEc
Confidence 44555599999999999999999999999876553 33444443
No 97
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=74.80 E-value=5.7 Score=44.14 Aligned_cols=56 Identities=11% Similarity=-0.067 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHcCCc--cEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEEEE
Q 003290 151 LQRRAVIDAATIAGLH--PLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGF 213 (833)
Q Consensus 151 ~qR~al~~Aa~~AGl~--~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~ 213 (833)
.-++.|.++...-|++ ++.++|+..|++++-.+. ....++.+=+|-|+=-.-+...
T Consensus 164 ~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~~-------~~~~~iglilGTGvgg~~i~~~ 221 (457)
T 2yhx_A 164 KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYT-------DAXIKMGIIFGSGVNAAYWCDS 221 (457)
T ss_dssp SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHH-------CTTEEEEEEESSSEEEEEEECG
T ss_pred HHHHHHHHhHhhcCCcceeEEEEecchhhccchhhc-------CCccEEEEEECcEEEEEEEECC
Confidence 4567777777655665 589999999999987652 1456777778888665555544
No 98
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=73.90 E-value=1.6 Score=40.65 Aligned_cols=21 Identities=29% Similarity=0.588 Sum_probs=18.4
Q ss_pred CeEEEEEcCccceEEEEEECC
Q 003290 1 MSVVGFDLGNESCIVAVARQR 21 (833)
Q Consensus 1 m~viGID~GTt~s~va~~~~~ 21 (833)
|.++|||+|+..+.+|+.+..
T Consensus 3 mriLGiDpG~~riGvAv~d~~ 23 (150)
T 1vhx_A 3 LRILGLDLGTKTLGVALSDEM 23 (150)
T ss_dssp EEEEEEEECSSEEEEEEECTT
T ss_pred CEEEEEEccCCEEEEEEEECC
Confidence 679999999999999998653
No 99
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=73.57 E-value=48 Score=34.80 Aligned_cols=44 Identities=16% Similarity=0.068 Sum_probs=30.0
Q ss_pred cCCccEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEE
Q 003290 163 AGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIA 211 (833)
Q Consensus 163 AGl~~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv 211 (833)
.|++ +.+.|+..|+|++........ ...+++++-+|.| +-.+++
T Consensus 131 ~~~p-v~v~NDa~aaal~E~~~g~~~---~~~~~v~i~~GtG-iG~gii 174 (343)
T 2yhw_A 131 LHLP-VWVDNDGNCAALAERKFGQGK---GLENFVTLITGTG-IGGGII 174 (343)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHTSTTT---TCSCEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhCCCC---CCCcEEEEEECCC-EEEEEE
Confidence 4776 679999999998765433211 2467888889987 445554
No 100
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=71.45 E-value=54 Score=37.29 Aligned_cols=67 Identities=18% Similarity=0.035 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHhCC-CCC-CCCCchhHHHhHHHHhchhhcC
Q 003290 311 LERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGK-EPR-RTMNASECVARGCALQCAILSP 382 (833)
Q Consensus 311 ~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg~-~~~-~~~npdeava~Gaa~~aa~ls~ 382 (833)
.+-+...+..+++..+ ++.|+|.||.+....+++.|.+..+. .+. ...-.|..+++|+|+++....+
T Consensus 292 ~~~L~~~~~~a~~~tg-----~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~a~~~~g 360 (576)
T 3ven_A 292 ERAVFGLADSVLARTG-----ERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAAVAVELG 360 (576)
T ss_dssp HHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcC-----CCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHHHHHHcC
Confidence 3344455556666654 67899999999999999999876553 222 2345688999999999876644
No 101
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=71.10 E-value=29 Score=37.94 Aligned_cols=44 Identities=30% Similarity=0.348 Sum_probs=30.3
Q ss_pred cCCccEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEE
Q 003290 163 AGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIA 211 (833)
Q Consensus 163 AGl~~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv 211 (833)
.|++ +.+.|+..|+|++........ ...+++++-+|.| +-.+++
T Consensus 208 ~~~p-V~v~NDa~aaalaE~~~g~~~---~~~~~v~l~~GtG-iG~giv 251 (429)
T 1z05_A 208 TGLP-VFVANDTRAWALAEKLFGHSQ---DVDNSVLISIHHG-LGAGIV 251 (429)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTT---TCSSEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCCCC---CCCcEEEEEECCc-EEEEEE
Confidence 4776 589999999998865443211 2467888889987 445554
No 102
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=71.01 E-value=13 Score=41.67 Aligned_cols=45 Identities=16% Similarity=0.118 Sum_probs=35.4
Q ss_pred CcCcEEEEecCccCHHHHHHHHHHHHHcCCccEEeec-hhHHHHHH
Q 003290 136 AVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFH-ETTATALA 180 (833)
Q Consensus 136 ~~~~~VITVP~~f~~~qR~al~~Aa~~AGl~~~~li~-EptAaAl~ 180 (833)
+-..+++.||..|+..+-.++.+++...|+++...|- --.++.++
T Consensus 127 ~~~~~i~~~~~~~df~~~a~~in~~~~~g~~i~~~i~q~dd~vli~ 172 (610)
T 2d0o_A 127 ADAPYILVVSSAFDFADIASVINASLRAGYQITGVILQRDDGVLVS 172 (610)
T ss_dssp TTSEEEEEECTTSCHHHHHHHHHHHHHTTCEEEEEEESSSCHHHHH
T ss_pred CCCcEEEEECCcCCHHHHHHHHHHHHHCCCcEEEEEEecCCEEEEc
Confidence 4567999999999999999999999999999876553 33444443
No 103
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=70.94 E-value=47 Score=35.88 Aligned_cols=44 Identities=18% Similarity=0.284 Sum_probs=30.2
Q ss_pred cCCccEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEE
Q 003290 163 AGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIA 211 (833)
Q Consensus 163 AGl~~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv 211 (833)
.|++ +.+.|+..|+|++........ ...+++++-+|.| +-.+++
T Consensus 186 ~~~p-v~v~NDa~aaalaE~~~g~~~---~~~~~v~l~~GtG-iG~giv 229 (406)
T 1z6r_A 186 TGVP-VYIQHDISAWTMAEALFGASR---GARDVIQVVIDHN-VGAGVI 229 (406)
T ss_dssp HSSC-EEEEEHHHHHHHHHHHHSTTT---TCSSEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhcCCC---CCCcEEEEEECCc-EEEEEE
Confidence 4776 679999999998765443211 2467888889987 445554
No 104
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=64.75 E-value=10 Score=42.12 Aligned_cols=47 Identities=13% Similarity=0.130 Sum_probs=28.9
Q ss_pred ccEEeechhHHHHHHH-----hhhcCCC---C----CCCCceEEEEEeCCceEEEEEEE
Q 003290 166 HPLRLFHETTATALAY-----GIYKTDL---P----ENDQLNVAFVDIGHASLQVCIAG 212 (833)
Q Consensus 166 ~~~~li~EptAaAl~y-----~~~~~~~---~----~~~~~~vlv~D~Gggt~dvsvv~ 212 (833)
..+++|+...=|.+.| .+..-.. . ......++|+|||||++.+++..
T Consensus 150 ~~v~VIsG~eEa~y~wl~vn~~lg~~~~~~~~~~~~~~~~~t~gvlDlGGgStqi~~~~ 208 (456)
T 3cj1_A 150 RGARILSGQDEGVFGWVTANYLLENFIKYGWVGRWIRPRKGTLGAMDLGGASTQITFET 208 (456)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHTTTTSCCEETTEECSSCCCCCEEEEECSSEEEEEEEC
T ss_pred CceEEcCchHHhhhhHHHHHhhhcccccccccccccccCCCceEEEEcCCCceEEEecc
Confidence 3568887776555554 3221100 0 00135689999999999999873
No 105
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=63.91 E-value=40 Score=36.50 Aligned_cols=45 Identities=16% Similarity=0.240 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCC-ChHHHHHHHHHHh
Q 003290 307 SAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSS-RVPAIIKILTEFF 355 (833)
Q Consensus 307 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-riP~v~~~l~~~f 355 (833)
++-++.+|.+.|-..... + ..+|.|+++||-. +.+.|++.|.+.+
T Consensus 310 ~d~f~yri~k~IGa~aa~--L--ggvDaIVFTgGIGEns~~vR~~i~~~l 355 (415)
T 2e1z_A 310 IKTFVHRIARHIAGHAAS--L--HRLDGIIFTGGIGENSVLIRQLVIEHL 355 (415)
T ss_dssp HHHHHHHHHHHHHHHHTT--C--SSCCEEEEEHHHHHHCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHH--h--CCCCEEEECccccccCHHHHHHHHhhH
Confidence 344555555555444322 2 4699999999999 9999999998776
No 106
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=63.06 E-value=14 Score=43.88 Aligned_cols=63 Identities=19% Similarity=0.183 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHh---CCCCCCCC---CchhHHHhHHHHhchhhc
Q 003290 314 VKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFF---GKEPRRTM---NASECVARGCALQCAILS 381 (833)
Q Consensus 314 i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~f---g~~~~~~~---npdeava~Gaa~~aa~ls 381 (833)
+...+.++.+..+ ++.|+|.||......+++.|.+.+ |..+..+. --|..+|+|+|++|+..-
T Consensus 693 L~~~~~~a~~~tg-----~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~~L 761 (772)
T 4g9i_A 693 FAHTAVERAREFG-----VKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGLYL 761 (772)
T ss_dssp HHHHHHHHHHTTT-----CSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-----cCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHHHH
Confidence 3444555555444 567999999999999999999887 44454432 248899999998887643
No 107
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=60.99 E-value=16 Score=39.17 Aligned_cols=72 Identities=19% Similarity=0.184 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHhC-CCCC----CCCCchhHHHhHHHHhchh
Q 003290 305 QISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFG-KEPR----RTMNASECVARGCALQCAI 379 (833)
Q Consensus 305 ~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg-~~~~----~~~npdeava~Gaa~~aa~ 379 (833)
++..-+..-+...|-+.++... ..++.|+++||+++.|.+-+.|++.++ ..+. ..+++|--=|+.-|++|..
T Consensus 260 Dv~ATLt~~TA~sIa~~~~~~~---~~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~aFA~LA~~ 336 (371)
T 3qbx_A 260 DIQATLLELSARSISESLLDAQ---PDCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAFAWLAHR 336 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC---TTCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHHHHHHHHH
Confidence 3444444444455555555433 246789999999999999999999985 3321 2233443334445555543
No 108
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=60.58 E-value=6.2 Score=36.10 Aligned_cols=21 Identities=33% Similarity=0.528 Sum_probs=18.4
Q ss_pred eEEEEEcCccceEEEEEECCc
Q 003290 2 SVVGFDLGNESCIVAVARQRG 22 (833)
Q Consensus 2 ~viGID~GTt~s~va~~~~~~ 22 (833)
.++|||||+..+.||+.++.+
T Consensus 4 ~iLglD~G~kriGvAvsd~~~ 24 (138)
T 1nu0_A 4 TLMAFDFGTKSIGVAVGQRIT 24 (138)
T ss_dssp EEEEEECCSSEEEEEEEETTT
T ss_pred eEEEEEeCCCEEEEEEEcCCC
Confidence 489999999999999988653
No 109
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=59.40 E-value=8.7 Score=35.97 Aligned_cols=19 Identities=26% Similarity=0.370 Sum_probs=17.6
Q ss_pred CeEEEEEcCccceEEEEEE
Q 003290 1 MSVVGFDLGNESCIVAVAR 19 (833)
Q Consensus 1 m~viGID~GTt~s~va~~~ 19 (833)
|-|+|||-|++++..|++.
T Consensus 1 m~ILGIDPGl~~tG~gvi~ 19 (158)
T 1hjr_A 1 AIILGIDPGSRVTGYGVIR 19 (158)
T ss_dssp CEEEEEECCSSEEEEEEEE
T ss_pred CEEEEEccCCCCeeEEEEE
Confidence 8899999999999999875
No 110
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=58.99 E-value=32 Score=35.23 Aligned_cols=24 Identities=17% Similarity=0.267 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Q 003290 600 VMEETKDRKNAVEAYVYDMRNKLC 623 (833)
Q Consensus 600 ~~~~~~~akN~LEs~iy~~r~~L~ 623 (833)
.....++.++.|..|.-.+|.++.
T Consensus 64 ~~~~~eelr~kL~p~~~el~~~l~ 87 (273)
T 3s84_A 64 VNTQAEQLRRQLTPYAQRMERVLR 87 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHH
Confidence 333445566666666666666664
No 111
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=57.74 E-value=18 Score=38.74 Aligned_cols=68 Identities=12% Similarity=0.110 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHhC-CCC------CCCCCchhHHHhHHHHhc
Q 003290 305 QISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFG-KEP------RRTMNASECVARGCALQC 377 (833)
Q Consensus 305 ~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg-~~~------~~~~npdeava~Gaa~~a 377 (833)
++..-+..=+...|-+.+.... ..+.|+++||+++.|.+-+.|++.++ .++ ..+.+.-||+|. |++|
T Consensus 267 Dv~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aF--A~LA 340 (370)
T 3cqy_A 267 DIQSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAF--AWLA 340 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHH--HHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHH--HHHH
Confidence 4455555555555666665542 35689999999999999999999994 233 233455566655 4555
Q ss_pred h
Q 003290 378 A 378 (833)
Q Consensus 378 a 378 (833)
.
T Consensus 341 ~ 341 (370)
T 3cqy_A 341 M 341 (370)
T ss_dssp H
T ss_pred H
Confidence 4
No 112
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=56.81 E-value=6.4 Score=40.34 Aligned_cols=70 Identities=13% Similarity=0.125 Sum_probs=39.0
Q ss_pred ecHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--CCCccEEEEeCCCCChHHHHHHHHHHhCCCCCCCCCchhHHHhHHHH
Q 003290 298 IKRDEFEQISAPILERVKRPLEKALAETGLS--VEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCAL 375 (833)
Q Consensus 298 itr~efe~l~~~~~~~i~~~i~~~l~~~~~~--~~~i~~ViLvGG~sriP~v~~~l~~~fg~~~~~~~npdeava~Gaa~ 375 (833)
+-++..+.+-..++......|+.++++..-. ...--.|+++||.+++ +. .. +.....+|+ -+-.|..+
T Consensus 182 ~g~nT~~ai~sGi~~g~~g~i~~~i~~~~~~~~~~~~~~vi~TGG~a~~--l~----~~---~~~~~~~~~-LvL~GL~~ 251 (266)
T 3djc_A 182 VGRSTIESIQSGVYYGVLGACKELIQRIHHEAFNGDQILILATGGFASL--FD----KQ---GLYDHLVPD-LVLQGIRL 251 (266)
T ss_dssp CBSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEEESTTGGG--GT----TT---TCCSEECTT-HHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCEEEEECCChHH--hc----cC---CCCCEECcC-hHHHHHHH
Confidence 5566667777777776666666666543211 1122469999998753 11 11 111233554 56778765
Q ss_pred hc
Q 003290 376 QC 377 (833)
Q Consensus 376 ~a 377 (833)
..
T Consensus 252 i~ 253 (266)
T 3djc_A 252 AA 253 (266)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 113
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=55.21 E-value=19 Score=41.79 Aligned_cols=64 Identities=6% Similarity=0.017 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHh-CCCCC---CCCCchhHHHhHHHHhchh
Q 003290 311 LERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFF-GKEPR---RTMNASECVARGCALQCAI 379 (833)
Q Consensus 311 ~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~f-g~~~~---~~~npdeava~Gaa~~aa~ 379 (833)
.+.+...+.++.+.. .++.|+|+||.+....+++.|.+.+ |.++. ...-.|.++++|.|+.|+.
T Consensus 584 a~~L~~~~~ra~~~~-----g~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 584 AQGFAALMREQATMR-----GITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp HHHHHHHHHHHHHTT-----TCCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc-----CCCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 333444444444443 3578999999999999999999988 54332 3345689999999998864
No 114
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens}
Probab=54.27 E-value=46 Score=32.31 Aligned_cols=49 Identities=12% Similarity=0.196 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHHHHHHHh
Q 003290 717 EKQKVLNECADAEAWVREKKQQQDALPKYAAPVLLLGDVRRKAEALDRFC 766 (833)
Q Consensus 717 e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~ 766 (833)
.+..+...+.+...|++++...-.... +-++.-.+.-+..|.+.|...+
T Consensus 106 ~L~~f~~~~~~~~~Wl~eke~~~~s~d-~g~~~~~v~~l~~k~~~f~~el 154 (210)
T 3pdy_A 106 SLHSFVAAATKELMWLNEKEEEEVGFD-WSDRNTNMTAKKESYSALMREL 154 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSC-CSTTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccc-cCCCchhHHHHHHHHHHHHHHH
Confidence 567888889999999999877665533 2334444555555555544443
No 115
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=53.43 E-value=35 Score=36.93 Aligned_cols=46 Identities=13% Similarity=0.011 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCC-ChHHHHHHHHHHh
Q 003290 306 ISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSS-RVPAIIKILTEFF 355 (833)
Q Consensus 306 l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-riP~v~~~l~~~f 355 (833)
.++-++.|+.+.|-...... ..+|.|+++||-. +.+.||+.|.+.+
T Consensus 301 A~d~f~yri~k~IGa~~a~L----ggvDaiVFTgGIGEns~~vR~~i~~~l 347 (408)
T 1g99_A 301 ALEIFAYKVKKFIGEYSAVL----NGADAVVFTAGIGENSASIRKRILTGL 347 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHHT----TSCSEEEEEHHHHHHCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHhh----CCCCEEEECccccccCHHHHHHHHhhh
Confidence 34455666666666555443 3589999999999 9999999998765
No 116
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=53.31 E-value=8.7 Score=36.26 Aligned_cols=19 Identities=32% Similarity=0.343 Sum_probs=17.7
Q ss_pred CeEEEEEcCccceEEEEEE
Q 003290 1 MSVVGFDLGNESCIVAVAR 19 (833)
Q Consensus 1 m~viGID~GTt~s~va~~~ 19 (833)
|-|+|||-|++++..+++.
T Consensus 1 MrILGIDPGl~~tG~gvi~ 19 (166)
T 4ep4_A 1 MVVAGIDPGITHLGLGVVA 19 (166)
T ss_dssp CEEEEEECCSSEEEEEEEE
T ss_pred CEEEEEccccCceEEEEEE
Confidence 8899999999999999975
No 117
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=51.06 E-value=8.7 Score=43.28 Aligned_cols=20 Identities=15% Similarity=0.192 Sum_probs=17.4
Q ss_pred eEEEEEcCccceEEEEEECC
Q 003290 2 SVVGFDLGNESCIVAVARQR 21 (833)
Q Consensus 2 ~viGID~GTt~s~va~~~~~ 21 (833)
-++|||+|||++++++++..
T Consensus 5 ~~lgIDiGtT~~k~~l~d~~ 24 (503)
T 2w40_A 5 VILSIDQSTQSTKVFFYDEE 24 (503)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred EEEEEEeCCcceEEEEECCC
Confidence 38999999999999998754
No 118
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=50.91 E-value=8.2 Score=39.99 Aligned_cols=20 Identities=20% Similarity=0.292 Sum_probs=17.2
Q ss_pred eEEEEEcCccceEEEEEECC
Q 003290 2 SVVGFDLGNESCIVAVARQR 21 (833)
Q Consensus 2 ~viGID~GTt~s~va~~~~~ 21 (833)
..+|||+|+|.+++++..++
T Consensus 21 ~~iGIDiGsTt~K~V~~~~~ 40 (287)
T 2ews_A 21 MKVGIDAGGTLIKIVQEQDN 40 (287)
T ss_dssp CEEEEEECSSEEEEEEECSS
T ss_pred eEEEEEEChhhEEEEEEcCC
Confidence 47999999999999998544
No 119
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=50.84 E-value=9.3 Score=43.08 Aligned_cols=20 Identities=15% Similarity=0.318 Sum_probs=17.5
Q ss_pred eEEEEEcCccceEEEEEECC
Q 003290 2 SVVGFDLGNESCIVAVARQR 21 (833)
Q Consensus 2 ~viGID~GTt~s~va~~~~~ 21 (833)
-+||||+|||++++++++..
T Consensus 5 ~~lgIDiGtts~K~~l~d~~ 24 (504)
T 3ll3_A 5 YIIGMDVGTTATKGVLYDIN 24 (504)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred EEEEEEecCCceEEEEEcCC
Confidence 38999999999999998754
No 120
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=50.25 E-value=23 Score=41.82 Aligned_cols=65 Identities=18% Similarity=0.134 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHh---CCCCC---CCCCchhHHHhHHHHhchhhc
Q 003290 312 ERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFF---GKEPR---RTMNASECVARGCALQCAILS 381 (833)
Q Consensus 312 ~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~f---g~~~~---~~~npdeava~Gaa~~aa~ls 381 (833)
+.+...+.++.+..+ ++.|+|+||.+....+++.|.+.+ |.++. ...-.|.++|+|.|+.|+...
T Consensus 679 ~~L~~~~~~a~~~~g-----~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~ 749 (761)
T 3vth_A 679 NFTYDLANLIRKETG-----INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKIL 749 (761)
T ss_dssp HHHHHHHHHHHHHHC-----CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-----CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHHh
Confidence 334444455555544 578999999999999999999887 43332 223458999999999886543
No 121
>2l7b_A Apolipoprotein E, APO-E; lipid transport, atherosclerosis, alzheime disease; NMR {Homo sapiens}
Probab=49.56 E-value=1.9e+02 Score=29.88 Aligned_cols=138 Identities=8% Similarity=0.030 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh---hhhhcc---CCHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcc
Q 003290 599 RVMEETKDRKNAVEAYVYDMRNKLC---DKYQDF---VTDSERELFTSKLQETEDWLYEDGEDETKGVYVAKLEELKKQG 672 (833)
Q Consensus 599 ~~~~~~~~akN~LEs~iy~~r~~L~---~~~~~~---~~~~er~~i~~~l~e~~~WL~~~g~~a~~~~~~~kl~~L~~~~ 672 (833)
+.....++.|..|+-|.-.++.++. ++|... ...+-+..+...++++..=|..-++. -+.-+...+++|+...
T Consensus 111 ~L~~dlEelR~~L~Py~~el~~~l~~~~eelr~kL~Py~~EL~~~~~~~~eeLr~~L~py~ee-Lr~kl~~~veelr~~L 189 (307)
T 2l7b_A 111 RLGADMEDVCGRLVQYRGEVQAMLGQSTEELRVRLASHLRKLRKRLLRDADDLQKRLAVYQAG-AREGAERGLSAIRERL 189 (307)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC-CSSHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhHHHH-HHHHHHHHHHHHHHHh
Confidence 4445667788888888888888875 234332 23455677777777777777654333 3566788899999999
Q ss_pred chHHHHHHhhh-------------cchHHHHHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 003290 673 DPIEERYKEFT-------------DRSSVIDQLAYCINSYREAALSSDPKFDHIDIAEKQKVLNECADAEAWVREKKQ 737 (833)
Q Consensus 673 ~pi~~R~~e~~-------------~rp~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~e~~~v~~~~~~~~~Wl~~~~~ 737 (833)
.|+..-+.... ..-..++.|+..|.-+...+...-....+.-++=..++...+.++..=+....+
T Consensus 190 ~Py~e~~~~~~~~v~~~k~~~L~~ki~~~~e~Lr~~L~p~~~~~~~~l~~l~~q~ee~~~ql~~~aeel~~kl~~~~e 267 (307)
T 2l7b_A 190 GPLVEQGRVRAATVGSLAGQPLQERAQAWGERLRARMEEMGSRTRDRLDEVKEQVAEVRAKLEEQAQQIRLQAEAAQA 267 (307)
T ss_dssp SSSCTTTTTHHHHHHHHHCCCCSSCSCCHHHHHHHHHHHHHHTCSCSSCCCCSSCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHhhhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHH
Confidence 88754333311 122347778888877766554444455555555555666666555555544433
No 122
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=49.54 E-value=68 Score=34.30 Aligned_cols=46 Identities=11% Similarity=0.111 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCC-ChHHHHHHHHHHhC
Q 003290 307 SAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSS-RVPAIIKILTEFFG 356 (833)
Q Consensus 307 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-riP~v~~~l~~~fg 356 (833)
++-+..++.+.|-..... + ..+|.|+++||-+ ..+.|++.|.+.++
T Consensus 293 ~d~f~yri~k~IGa~aa~--L--~gvDaIVFTgGIgEns~~iR~~i~~~l~ 339 (384)
T 3khy_A 293 IEIFSHRVAKFVASYMIY--F--NKLDALVFTGGIGENAANIRKNIISKLA 339 (384)
T ss_dssp HHHHHHHHHHHHHHHGGG--C--SSCCEEEEEHHHHHHCHHHHHHHHHHTG
T ss_pred HHHHHHHHHHHHHHHHHH--h--CCCCEEEECCccccCcHHHHHHHHhhcc
Confidence 334455555555443322 2 3699999999988 77899999987763
No 123
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=48.77 E-value=8.1 Score=43.42 Aligned_cols=20 Identities=15% Similarity=0.180 Sum_probs=17.3
Q ss_pred eEEEEEcCccceEEEEEECC
Q 003290 2 SVVGFDLGNESCIVAVARQR 21 (833)
Q Consensus 2 ~viGID~GTt~s~va~~~~~ 21 (833)
-++|||+|||++++++++..
T Consensus 3 ~~lgiDiGtT~~k~~l~d~~ 22 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILFTLE 22 (495)
T ss_dssp CEEEEEECSSEEEEEEECTT
T ss_pred EEEEEeeCCcceEEEEECCC
Confidence 38999999999999998643
No 124
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=48.32 E-value=26 Score=38.67 Aligned_cols=44 Identities=16% Similarity=0.214 Sum_probs=27.1
Q ss_pred cEEeechhHHHHHH-----HhhhcCCCCCCCCceEEEEEeCCceEEEEEEE
Q 003290 167 PLRLFHETTATALA-----YGIYKTDLPENDQLNVAFVDIGHASLQVCIAG 212 (833)
Q Consensus 167 ~~~li~EptAaAl~-----y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~ 212 (833)
.+++|+...=+.++ |.+.. +.......+.++|||||+++++...
T Consensus 151 ~v~iisG~eEg~y~wi~vnyllg~--l~~~~~~t~g~lDlGGgStQi~f~~ 199 (452)
T 3zx3_A 151 GAKIITGQEEGAYGWITINYLLGR--FKTPGGSTFGALDLGGASTQITFVP 199 (452)
T ss_dssp EEEECCHHHHHHHHHHHHHHHTTT--TC---CCCCEEEEECSSEEEEEECC
T ss_pred ceEECCchhhhhhhHHHHHhhhcc--ccCCCCCceEEEecCCCceEEEecc
Confidence 46788766555444 43322 1111235688999999999998753
No 125
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=47.33 E-value=10 Score=43.07 Aligned_cols=19 Identities=26% Similarity=0.396 Sum_probs=16.5
Q ss_pred EEEEEcCccceEEEEEECC
Q 003290 3 VVGFDLGNESCIVAVARQR 21 (833)
Q Consensus 3 viGID~GTt~s~va~~~~~ 21 (833)
+||||+|||++++++++..
T Consensus 6 vlgID~GTss~Ka~l~d~~ 24 (526)
T 3ezw_A 6 IVALDQGTTSSRAVVMDHD 24 (526)
T ss_dssp EEEEEECSSEEEEEEECTT
T ss_pred EEEEEccccceeeeEEcCC
Confidence 7999999999999887643
No 126
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=46.68 E-value=66 Score=25.56 Aligned_cols=48 Identities=23% Similarity=0.326 Sum_probs=37.1
Q ss_pred HHHH-HHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCC
Q 003290 583 DVQK-AVEKEFEMALQDRVMEETKDRKNAVEAYVYDMRNKLCDKYQDFVT 631 (833)
Q Consensus 583 ei~~-~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~L~~~~~~~~~ 631 (833)
+++. +.++.+++...|...++.+......|+-|-.+|..|+ .|+.+++
T Consensus 23 eLq~~L~~K~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLD-KfrSVl~ 71 (72)
T 3nmd_A 23 DLQYALQEKIEELRQRDALIDELELELDQKDELIQMLQNELD-KYRSVIR 71 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhccCC
Confidence 3443 3456778888999999999999999999999988886 5666554
No 127
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=46.61 E-value=11 Score=42.43 Aligned_cols=20 Identities=20% Similarity=0.316 Sum_probs=17.4
Q ss_pred eEEEEEcCccceEEEEEECC
Q 003290 2 SVVGFDLGNESCIVAVARQR 21 (833)
Q Consensus 2 ~viGID~GTt~s~va~~~~~ 21 (833)
-+||||+|||++++++++..
T Consensus 7 ~~lgIDiGtts~k~~l~d~~ 26 (501)
T 3g25_A 7 YILSIDQGTTSSRAILFNQK 26 (501)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEEeCccceEEEEEcCC
Confidence 48999999999999998643
No 128
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=46.19 E-value=13 Score=42.02 Aligned_cols=21 Identities=33% Similarity=0.620 Sum_probs=17.9
Q ss_pred eEEEEEcCccceEEEEEECCc
Q 003290 2 SVVGFDLGNESCIVAVARQRG 22 (833)
Q Consensus 2 ~viGID~GTt~s~va~~~~~~ 22 (833)
-+||||+|||++++++++..+
T Consensus 8 ~~lgIDiGtts~k~~l~d~~G 28 (508)
T 3ifr_A 8 QVIGLDIGTTSTIAILVRLPD 28 (508)
T ss_dssp EEEEEEECSSEEEEEEEETTT
T ss_pred EEEEEEecCcceEEEEECCCC
Confidence 379999999999999987543
No 129
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=45.94 E-value=11 Score=42.59 Aligned_cols=20 Identities=20% Similarity=0.223 Sum_probs=17.3
Q ss_pred eEEEEEcCccceEEEEEECC
Q 003290 2 SVVGFDLGNESCIVAVARQR 21 (833)
Q Consensus 2 ~viGID~GTt~s~va~~~~~ 21 (833)
-+||||+|||++++++++..
T Consensus 27 ~~lgIDiGtts~k~~l~d~~ 46 (520)
T 4e1j_A 27 YILAIDQGTTSTRAIVFDGN 46 (520)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred eEEEEEeCCcceEEEEECCC
Confidence 48999999999999998643
No 130
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=45.92 E-value=12 Score=42.08 Aligned_cols=20 Identities=20% Similarity=0.272 Sum_probs=17.5
Q ss_pred eEEEEEcCccceEEEEEECC
Q 003290 2 SVVGFDLGNESCIVAVARQR 21 (833)
Q Consensus 2 ~viGID~GTt~s~va~~~~~ 21 (833)
-+||||+|||++++++++..
T Consensus 6 ~~lgIDiGtts~k~~l~d~~ 25 (506)
T 3h3n_X 6 YVMAIDQGTTSSRAIIFDRN 25 (506)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred EEEEEEcCCCceEEEEECCC
Confidence 38999999999999998754
No 131
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=45.13 E-value=22 Score=36.97 Aligned_cols=49 Identities=12% Similarity=0.171 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHhCCC
Q 003290 307 SAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKE 358 (833)
Q Consensus 307 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg~~ 358 (833)
.....+.+...|+++|+++++++++|++|+..|+++++ -+.+.+.||.+
T Consensus 213 ~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg~~ 261 (317)
T 1hnj_A 213 FKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRI---ISATAKKLGMS 261 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHH---HHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCCC
Confidence 33455677788999999999999999999999998765 45688888853
No 132
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=44.52 E-value=14 Score=42.08 Aligned_cols=20 Identities=25% Similarity=0.375 Sum_probs=17.6
Q ss_pred eEEEEEcCccceEEEEEECC
Q 003290 2 SVVGFDLGNESCIVAVARQR 21 (833)
Q Consensus 2 ~viGID~GTt~s~va~~~~~ 21 (833)
-+||||+|||++++++++..
T Consensus 6 ~~lgIDiGtts~ka~l~d~~ 25 (554)
T 3l0q_A 6 YFIGVDVGTGSARAGVFDLQ 25 (554)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred EEEEEEECcccEEEEEECCC
Confidence 48999999999999998744
No 133
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=44.46 E-value=13 Score=42.18 Aligned_cols=20 Identities=15% Similarity=0.386 Sum_probs=17.4
Q ss_pred eEEEEEcCccceEEEEEECC
Q 003290 2 SVVGFDLGNESCIVAVARQR 21 (833)
Q Consensus 2 ~viGID~GTt~s~va~~~~~ 21 (833)
-++|||+|||.+++++++..
T Consensus 11 ~~lgID~GTts~Ka~l~d~~ 30 (538)
T 4bc3_A 11 CCLGWDFSTQQVKVVAVDAE 30 (538)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred EEEEEEEcCcCEEEEEECCC
Confidence 38999999999999998753
No 134
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=43.40 E-value=14 Score=41.76 Aligned_cols=20 Identities=25% Similarity=0.345 Sum_probs=17.4
Q ss_pred eEEEEEcCccceEEEEEECC
Q 003290 2 SVVGFDLGNESCIVAVARQR 21 (833)
Q Consensus 2 ~viGID~GTt~s~va~~~~~ 21 (833)
-+||||+|||++++++++..
T Consensus 4 ~~lgIDiGtts~k~~l~d~~ 23 (510)
T 2p3r_A 4 YIVALDQGTTSSRAVVMDHD 23 (510)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEEcCCcceEEEEECCC
Confidence 48999999999999998643
No 135
>4ehp_B Catenin alpha-1; adherens junctions, vinculin binding site, vinculin binding helix bundle, cell adhesion; 2.66A {Homo sapiens}
Probab=41.90 E-value=40 Score=29.20 Aligned_cols=81 Identities=15% Similarity=0.179 Sum_probs=53.0
Q ss_pred HHhhhcchHHHHHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH----hhcCCCCCCCcccHHH
Q 003290 679 YKEFTDRSSVIDQLAYCINSYREAALSSDPKFDHIDIAEKQKVLNECADAEAWVREKKQQ----QDALPKYAAPVLLLGD 754 (833)
Q Consensus 679 ~~e~~~rp~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~e~~~v~~~~~~~~~Wl~~~~~~----q~~~~~~~dP~~~~~d 754 (833)
+.+..-||..-+.|...|..+..+.. ..|+ ..+.++.|...|+.+.+=|.+.+.+ +.+...+++--.-+.-
T Consensus 25 ~~~~~~r~~Lee~LE~Iisgaa~~aD---S~~T--r~e~RerIv~eCnavRqaLQdLlseym~~~g~ke~se~L~~aI~k 99 (111)
T 4ehp_B 25 FSEERFRPSLEERLESIISGAALMAD---SSCT--RDDRRERIVAECNAVRQALQDLLSEYMGNAGRKERSDALNSAIDK 99 (111)
T ss_dssp HHHHSSSCCHHHHHHHHHHHHTCSCC---CCSG--GGHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCCCCCHHHHHHHH
T ss_pred ccccccchhHHHHHHHHHHHHHHHHh---hhcc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHH
Confidence 36677788888888888887765543 3443 3688999999999988777666665 5555555544444444
Q ss_pred HHHHHHHHHH
Q 003290 755 VRRKAEALDR 764 (833)
Q Consensus 755 i~~k~~~l~~ 764 (833)
+-+|.++|.+
T Consensus 100 m~~kt~dLrR 109 (111)
T 4ehp_B 100 MTKKTRDLRR 109 (111)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 4455555543
No 136
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=41.75 E-value=13 Score=41.69 Aligned_cols=20 Identities=20% Similarity=0.263 Sum_probs=17.4
Q ss_pred eEEEEEcCccceEEEEEECC
Q 003290 2 SVVGFDLGNESCIVAVARQR 21 (833)
Q Consensus 2 ~viGID~GTt~s~va~~~~~ 21 (833)
-++|||+|||++++++++..
T Consensus 4 ~~lgiDiGtt~~k~~l~d~~ 23 (497)
T 2zf5_O 4 FVLSLDEGTTSARAIIFDRE 23 (497)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEecCCchhEEEEECCC
Confidence 48999999999999998643
No 137
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=41.59 E-value=10 Score=42.46 Aligned_cols=19 Identities=42% Similarity=0.489 Sum_probs=16.8
Q ss_pred eEEEEEcCccceEEEEEEC
Q 003290 2 SVVGFDLGNESCIVAVARQ 20 (833)
Q Consensus 2 ~viGID~GTt~s~va~~~~ 20 (833)
.++|||+|||++++++++.
T Consensus 5 ~~lgiDiGtts~k~~l~d~ 23 (489)
T 2uyt_A 5 NCVAVDLGASSGRVMLARY 23 (489)
T ss_dssp EEEEEEECSSEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEEe
Confidence 4899999999999999863
No 138
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=41.53 E-value=15 Score=41.53 Aligned_cols=20 Identities=25% Similarity=0.458 Sum_probs=17.5
Q ss_pred eEEEEEcCccceEEEEEECC
Q 003290 2 SVVGFDLGNESCIVAVARQR 21 (833)
Q Consensus 2 ~viGID~GTt~s~va~~~~~ 21 (833)
-++|||+|||++++++++..
T Consensus 6 ~~lgIDiGtts~k~~l~d~~ 25 (511)
T 3hz6_A 6 YIATFDIGTTEVKAALADRD 25 (511)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEEeCCCceEEEEECCC
Confidence 58999999999999998643
No 139
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=40.68 E-value=17 Score=40.98 Aligned_cols=18 Identities=39% Similarity=0.597 Sum_probs=16.8
Q ss_pred eEEEEEcCccceEEEEEE
Q 003290 2 SVVGFDLGNESCIVAVAR 19 (833)
Q Consensus 2 ~viGID~GTt~s~va~~~ 19 (833)
-+||||+|||++++++++
T Consensus 6 ~~lgIDiGtts~ka~l~d 23 (515)
T 3i8b_A 6 LVAGVDTSTQSCKVRVTD 23 (515)
T ss_dssp EEEEEEECSSEEEEEEEE
T ss_pred EEEEEEeccccEEEEEEE
Confidence 489999999999999998
No 140
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=40.58 E-value=15 Score=42.07 Aligned_cols=19 Identities=26% Similarity=0.359 Sum_probs=17.2
Q ss_pred eEEEEEcCccceEEEEEEC
Q 003290 2 SVVGFDLGNESCIVAVARQ 20 (833)
Q Consensus 2 ~viGID~GTt~s~va~~~~ 20 (833)
-+||||+|||++++++++.
T Consensus 6 ~~lgIDiGTts~Ka~l~d~ 24 (572)
T 3jvp_A 6 YTIGVDYGTESGRAVLIDL 24 (572)
T ss_dssp EEEEEEECSSEEEEEEEET
T ss_pred EEEEEecCCcceEEEEEEC
Confidence 4899999999999999874
No 141
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=40.24 E-value=13 Score=41.62 Aligned_cols=20 Identities=20% Similarity=0.240 Sum_probs=16.9
Q ss_pred eEEEEEcCccceEEEEEECC
Q 003290 2 SVVGFDLGNESCIVAVARQR 21 (833)
Q Consensus 2 ~viGID~GTt~s~va~~~~~ 21 (833)
-++|||+|||++++++++..
T Consensus 7 ~~lgIDiGTts~Ka~l~d~~ 26 (482)
T 3h6e_A 7 ATIVIDLGKTLSKVSLWDLD 26 (482)
T ss_dssp -CEEEEECSSEEEEEEECTT
T ss_pred eEEEEEcCCCCeEEEEEECC
Confidence 47999999999999998743
No 142
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=38.96 E-value=16 Score=40.77 Aligned_cols=19 Identities=26% Similarity=0.538 Sum_probs=16.6
Q ss_pred EEEEEcCccceEEEEEECC
Q 003290 3 VVGFDLGNESCIVAVARQR 21 (833)
Q Consensus 3 viGID~GTt~s~va~~~~~ 21 (833)
++|||+|||++++++++..
T Consensus 2 ~lgiDiGtt~~k~~l~d~~ 20 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNEQ 20 (484)
T ss_dssp EEEEEECSSEEEEEEECTT
T ss_pred EEEEEecCcccEEEEECCC
Confidence 6999999999999998643
No 143
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=38.64 E-value=1.8e+02 Score=29.86 Aligned_cols=48 Identities=19% Similarity=0.178 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHHHHHHHh
Q 003290 718 KQKVLNECADAEAWVREKKQQQDALPKYAAPVLLLGDVRRKAEALDRFC 766 (833)
Q Consensus 718 ~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~ 766 (833)
+..+...+.++..|+.++...-...+. -+.+-.+..+..+.+.+.+.+
T Consensus 112 l~~f~~~~~~l~~Wl~~~e~~l~~~~~-g~d~~~v~~l~~~~~~f~~el 159 (326)
T 3kbt_A 112 LFQLKRETDDLEQWISEKELVASSPEM-GQDFDHVTLLRDKFRDFARET 159 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCCC-CSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccccC-CCCHHHHHHHHHHHHHHHHHH
Confidence 445566778888888886654443222 222333444444444444443
No 144
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=38.00 E-value=29 Score=36.14 Aligned_cols=47 Identities=19% Similarity=0.265 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHhCCC
Q 003290 309 PILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKE 358 (833)
Q Consensus 309 ~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg~~ 358 (833)
-....+...++++|++++++++||++|++.|+++++ -+.+.+.||.+
T Consensus 217 ~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~~ 263 (322)
T 1ub7_A 217 FAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRI---IDAARERLGLP 263 (322)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCCC
Confidence 445677788999999999999999999999988765 34678888743
No 145
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=37.34 E-value=16 Score=41.16 Aligned_cols=20 Identities=25% Similarity=0.267 Sum_probs=17.2
Q ss_pred eEEEEEcCccceEEEEEECC
Q 003290 2 SVVGFDLGNESCIVAVARQR 21 (833)
Q Consensus 2 ~viGID~GTt~s~va~~~~~ 21 (833)
-++|||+|||++++++++..
T Consensus 3 ~~lgiDiGtts~k~~l~d~~ 22 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDHS 22 (504)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEecCCcceEEEEECCC
Confidence 47999999999999998643
No 146
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=37.31 E-value=31 Score=35.65 Aligned_cols=46 Identities=20% Similarity=0.289 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHhCC
Q 003290 309 PILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGK 357 (833)
Q Consensus 309 ~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg~ 357 (833)
.....+...++++|++++++++||+.|++.|+++++ -+.+.+.||.
T Consensus 207 ~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~~~~~~~lg~ 252 (309)
T 2ebd_A 207 VAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRI---INALAEKLNI 252 (309)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhCC
Confidence 345567788999999999999999999999998765 3467788874
No 147
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=37.26 E-value=79 Score=35.13 Aligned_cols=30 Identities=13% Similarity=0.244 Sum_probs=23.9
Q ss_pred CceEEEEEeCCceEEEEEEEEeCC-eEEEEE
Q 003290 193 QLNVAFVDIGHASLQVCIAGFKKG-QLKILG 222 (833)
Q Consensus 193 ~~~vlv~D~Gggt~dvsvv~~~~~-~~~vl~ 222 (833)
...+|.+|+||.++-+++|++.++ .+++..
T Consensus 79 ~G~~LalDlGGTn~Rv~~V~l~g~~~~~~~~ 109 (485)
T 3o8m_A 79 TGDFLALDLGGTNLRVVLVKLGGNHDFDTTQ 109 (485)
T ss_dssp EEEEEEEEESSSEEEEEEEEEESSSCEEEEE
T ss_pred ceEEEEEEecCCeEEEEEEEECCCCceEEEE
Confidence 356999999999999999999865 344443
No 148
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=37.04 E-value=55 Score=36.06 Aligned_cols=126 Identities=8% Similarity=0.081 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhhh---------cCCC-CCHHHHHHHHHHHHhccchHHHHHHhhhcchHHHHHHHHHHHHHHHHhhcCCC
Q 003290 639 TSKLQETEDWLYE---------DGED-ETKGVYVAKLEELKKQGDPIEERYKEFTDRSSVIDQLAYCINSYREAALSSDP 708 (833)
Q Consensus 639 ~~~l~e~~~WL~~---------~g~~-a~~~~~~~kl~~L~~~~~pi~~R~~e~~~rp~a~~~l~~~l~~~~~~~~~~~~ 708 (833)
...++++..||.+ -|.+ ++.+.+..|.+.|+.-+.....++.........-..+...-..+..+......
T Consensus 8 ~r~v~dl~~Wl~E~~~~L~S~d~GkDL~sVe~LLqKH~~lE~eI~a~~~~v~~l~~~a~~~~~~~~L~~~y~~L~~~a~~ 87 (450)
T 3r6n_A 8 KHVTSECLGWMRQQRAEMDMVAWGVDLASVEQHINSHRGIHNSIGDYRWQLDKIKADLREKSAIYQLEEEYENLLKASFE 87 (450)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHhcCccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHH
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHHHHHHHhH
Q 003290 709 KFDHIDIAEKQKVLNECADAEAWVREKKQQQDALPKYAAPVLLLGDVRRKAEALDRFCR 767 (833)
Q Consensus 709 ~~~~~~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~~ 767 (833)
...++. .+..+...+.+...|++++...-....-.+++. .+.-+..|.+.|+.++.
T Consensus 88 Rr~~Le--~L~qFl~d~~ee~~Wi~EKe~~~~s~d~gd~l~-dv~~l~~khq~l~~EL~ 143 (450)
T 3r6n_A 88 RMDHLR--QLQNIIQATSREIMWINDCEEEELLYDWSDKNT-NIAQKQEAFSIRMSQLE 143 (450)
T ss_dssp HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHSCCCSTTCC-CTTHHHHHHHHHHHHHH
T ss_pred HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhccccCcChh-hHHHHHHHHHHHHHHHH
No 149
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=36.86 E-value=1.2e+02 Score=30.23 Aligned_cols=20 Identities=15% Similarity=0.335 Sum_probs=17.3
Q ss_pred eEEEEEcCccceEEEEEECC
Q 003290 2 SVVGFDLGNESCIVAVARQR 21 (833)
Q Consensus 2 ~viGID~GTt~s~va~~~~~ 21 (833)
-.++||+|+|+++.|++.++
T Consensus 4 M~L~IDIGNT~ik~gl~~~~ 23 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITEDG 23 (249)
T ss_dssp EEEEEEECSSEEEEEEESSS
T ss_pred eEEEEEECCCeEEEEEEECC
Confidence 47899999999999998654
No 150
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=36.27 E-value=19 Score=36.40 Aligned_cols=46 Identities=17% Similarity=0.187 Sum_probs=26.0
Q ss_pred ecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCCh
Q 003290 298 IKRDEFEQISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRV 344 (833)
Q Consensus 298 itr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sri 344 (833)
+-++..+.+-..++..+...|+..+++..-.. .--.|+++||.+++
T Consensus 178 ~g~nT~~ai~sGi~~g~~g~i~~~i~~~~~~~-~~~~vi~TGG~a~~ 223 (249)
T 3bex_A 178 VGKDTEENIRLGVVNGSVYALEGIIGRIKEVY-GDLPVVLTGGQSKI 223 (249)
T ss_dssp SBSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCEEEESTTSGG
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECCChHH
Confidence 44555666666666555555555544321111 12358999999864
No 151
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=36.05 E-value=71 Score=27.27 Aligned_cols=24 Identities=4% Similarity=0.130 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q 003290 717 EKQKVLNECADAEAWVREKKQQQD 740 (833)
Q Consensus 717 e~~~v~~~~~~~~~Wl~~~~~~q~ 740 (833)
++..+.+.++++..||.+.-....
T Consensus 3 ~L~~f~~~l~el~~WL~e~e~~l~ 26 (118)
T 3uul_A 3 DLDSYQIALEEVLTWLLSAEDTFQ 26 (118)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666777777777776544443
No 152
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0
Probab=35.55 E-value=2.5e+02 Score=25.26 Aligned_cols=33 Identities=9% Similarity=-0.045 Sum_probs=22.0
Q ss_pred CCHHHHHHHHHHHHhccchHHHHHHhhhcchHH
Q 003290 656 ETKGVYVAKLEELKKQGDPIEERYKEFTDRSSV 688 (833)
Q Consensus 656 a~~~~~~~kl~~L~~~~~pi~~R~~e~~~rp~a 688 (833)
.+.+.+.+++..|......+..+..+...+=+.
T Consensus 12 ~~a~~I~~r~~~l~~r~~~L~~~a~~R~~~Le~ 44 (149)
T 3f31_A 12 ETAEDIQERRQQVLDRYHRFKELSTLRRQKLED 44 (149)
T ss_dssp -CTTHHHHHHHHHHHHTCSCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345567888888888877777776665554443
No 153
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=34.64 E-value=4e+02 Score=27.40 Aligned_cols=232 Identities=11% Similarity=0.067 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhcCCCcCcEEEEecC------------ccCHHHHHHHHHHHHHcCCccEEeechhHHHHHHHhhh-----
Q 003290 122 LSNLKAIAESNLNAAVVDCCIGIPV------------YFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIY----- 184 (833)
Q Consensus 122 L~~l~~~ae~~~~~~~~~~VITVP~------------~f~~~qR~al~~Aa~~AGl~~~~li~EptAaAl~y~~~----- 184 (833)
+..+....-...+..+..+.|++|. .|. ..++.+.+.. |++.+.+.|+..|+|++-...
T Consensus 52 ~~~~i~~~~~~~~~~i~gigi~~pG~vd~~~~~~~nl~w~-~~~~~l~~~~---~~p~V~v~NDanaaalgE~~~~~~~~ 127 (332)
T 1sz2_A 52 LEAVIRVYLEEHKVEVKDGCIAIACPITGDWVAMTNHTWA-FSIAEMKKNL---GFSHLEIINDFTAVSMAIPMLKKEHL 127 (332)
T ss_dssp HHHHHHHHHHHSCCCCCEEEEEESSCCCSSEECCSSSCCC-EEHHHHHHHH---TCSEEEEEEHHHHHHHHGGGCCGGGE
T ss_pred HHHHHHHHHHhcCCCccEEEEEEeCceeCCEEeeeCCCCc-CCHHHHHHHh---CCCcEEEEeCHhHHhccccccChhhh
Q ss_pred -------cCCCCCCCCceEEEEEeCCceEEEEEEEEeCCeEEEEEeeCCCCcc-cHHHHHHHHHHHHHHHHhhhccCccC
Q 003290 185 -------KTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVG-GRDFDEVLFQHFAAKFKEEYKIDVSQ 256 (833)
Q Consensus 185 -------~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~d~~lG-G~~~D~~l~~~l~~~~~~k~~~~~~~ 256 (833)
... ..+++++-+|-|-=-.-++.-..|..-.-+..|...+. ....+..+..+++..+. .--+.-.-
T Consensus 128 ~~~g~g~~~~-----~~~~~~v~~GTGiG~giv~~g~~G~~g~agE~GH~~v~~~~~~~~~l~~~~c~~~g-~gclE~~~ 201 (332)
T 1sz2_A 128 IQFGGAEPVE-----GKPIAVYGAGTGLGVAHLVHVDKRWVSLPGEGGHVDFAPNSEEEAIILEILRAEIG-HVSAERVL 201 (332)
T ss_dssp EECSSCCCCT-----TCCEEEEEESSSEEEEEEEEETTEEEEEECCGGGSBCCCCSHHHHHHHHHHHHHSS-SCBGGGTS
T ss_pred eecCCCCCCC-----CCcEEEEEcCccceEEEEecCCCCeeeCCCCccccCcCCCChHHHHHHHHHHhccC-Ccchhhhc
Q ss_pred CHHHHHHHHHHHHHHhhhcCCCCceeEEEeccccCccce-EEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccE-
Q 003290 257 NARASLRLRVACEKLKKVLSANPEAPLNIECLMEEKDVR-GFIKRDEFEQISAPILERVKRPLEKALAETGLSVEDVHM- 334 (833)
Q Consensus 257 ~~~~~~rL~~~aek~K~~LS~~~~~~~~ie~l~~~~d~~-~~itr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~- 334 (833)
...++.++........ .........+.++.-..-- =..-++-|++.+..+-.-+..++.-. +.+.
T Consensus 202 S~~~l~~~~~~~~~~~----~~~~~~~~~~~i~~~a~~G~D~~A~~~~~~~~~~Lg~~i~~l~~~l---------~P~~g 268 (332)
T 1sz2_A 202 SGPGLVNLYRAIVKAD----NRLPENLKPKDITERALADSCTDCRRALSLFCVIMGRFGGNLALNL---------GTFGG 268 (332)
T ss_dssp SHHHHHHHHHHHHHHT----TCCCCCCCHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHH---------TCTTE
T ss_pred cHHHHHHHHHHHhhcc----CCCccCCCHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH---------CCCeE
Q ss_pred EEEeCCCCCh-------HHHHHHHHH--Hh-----CCCCCCCCCchhHHHhHHHHhc
Q 003290 335 VEVVGSSSRV-------PAIIKILTE--FF-----GKEPRRTMNASECVARGCALQC 377 (833)
Q Consensus 335 ViLvGG~sri-------P~v~~~l~~--~f-----g~~~~~~~npdeava~Gaa~~a 377 (833)
|+|.||.+.. |.+++.+.+ .+ ..++.... .+.+..+||+.++
T Consensus 269 vvigGGi~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~a~l~GAa~l~ 324 (332)
T 1sz2_A 269 VFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVHDIPVYLIV-HDNPGLLGSGAHL 324 (332)
T ss_dssp EEEECSSSGGGHHHHHHSSHHHHHHCCGGGHHHHTTCCEEEEC-CSCHHHHHHHHHH
T ss_pred EEEEChhhhhHHHHhccHHHHHHHHhcCchhhHHhCceEEEEE-CCchhHHHHHHHH
No 154
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus}
Probab=34.44 E-value=55 Score=32.04 Aligned_cols=25 Identities=16% Similarity=0.397 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc
Q 003290 717 EKQKVLNECADAEAWVREKKQQQDA 741 (833)
Q Consensus 717 e~~~v~~~~~~~~~Wl~~~~~~q~~ 741 (833)
.+..+...+++...|++++...-..
T Consensus 121 ~l~~F~~~~~~~~~Wi~eke~~~~s 145 (224)
T 2iak_A 121 TLHNFVTRATNELIWLNEKEESEVA 145 (224)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7777888888999999988876443
No 155
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1
Probab=34.24 E-value=3.1e+02 Score=25.98 Aligned_cols=48 Identities=21% Similarity=0.389 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHHHHHHHh
Q 003290 718 KQKVLNECADAEAWVREKKQQQDALPKYAAPVLLLGDVRRKAEALDRFC 766 (833)
Q Consensus 718 ~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~ 766 (833)
+..+...++++..|+.++... .....+-+-+-.+..+..|.+.|+..+
T Consensus 111 l~qf~~~~~~~~~Wl~e~e~~-~~~~~~g~dl~~v~~ll~kh~~~~~el 158 (216)
T 1u5p_A 111 LHQFFRDMDDEESWIKEKKLL-VSSEDYGRDLTGVQNLRKKHKRLEAEL 158 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HTCCCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHH-hcCcccCCCHHHHHHHHHHHHHHHHHH
Confidence 344666678888888887543 322323233344444455555444444
No 156
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=34.18 E-value=99 Score=33.23 Aligned_cols=47 Identities=11% Similarity=0.176 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCC-ChHHHHHHHHHHhC
Q 003290 306 ISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSS-RVPAIIKILTEFFG 356 (833)
Q Consensus 306 l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-riP~v~~~l~~~fg 356 (833)
.++-++.++.+.|-...... .++|.|+++||-+ +.+.|++.|.+.++
T Consensus 302 a~d~f~yriak~Iga~aa~L----G~vDaIVfTGGIgEns~~vr~~I~~~l~ 349 (398)
T 4ijn_A 302 AYDVYIHRLRKYIGAYMAVL----GRTDVISFTAGVGENVPPVRRDALAGLG 349 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHH----SSCCEEEEEHHHHHHCHHHHHHHHTTCG
T ss_pred HHHHHHHHHHHHHHHHHHHh----CCCcEEEECCccccccHHHHHHHHHHHh
Confidence 34455556655555444332 3689999999988 56889999987653
No 157
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens}
Probab=33.75 E-value=2.3e+02 Score=26.47 Aligned_cols=48 Identities=15% Similarity=0.250 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHHHHHHHh
Q 003290 718 KQKVLNECADAEAWVREKKQQQDALPKYAAPVLLLGDVRRKAEALDRFC 766 (833)
Q Consensus 718 ~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~ 766 (833)
+..+...++.+..||......-.. ...-+.+-.+..+..+.+.+++.+
T Consensus 112 l~~F~~d~~~~~~Wl~~~e~~L~~-~~~g~sl~~ve~LlkkH~~fe~~l 159 (185)
T 3lbx_B 112 VCQFSRDASVAEAWLIAQEPYLAS-GDFGHTVDSVEKLIKRHEAFEKST 159 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC-CCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHhHhhhcc-CCCCCCHHHHHHHHHHHHHHHHHH
Confidence 445667788889999876554433 222223334444555555555444
No 158
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=33.73 E-value=24 Score=35.98 Aligned_cols=72 Identities=10% Similarity=0.107 Sum_probs=39.1
Q ss_pred ecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHhCCCCCCCCCchhHHHhHHHHhc
Q 003290 298 IKRDEFEQISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQC 377 (833)
Q Consensus 298 itr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg~~~~~~~npdeava~Gaa~~a 377 (833)
+-++..+.+-..++..+...|+..+++..-....--.|+++||.++ .|...+.. ....+|+ -+-.|..+..
T Consensus 180 ~g~nT~~ai~sGi~~g~~g~i~~~i~~~~~e~~~~~~vi~TGG~a~------~l~~~~~~--~~~~~~~-LvL~GL~~i~ 250 (268)
T 2h3g_X 180 VGKNTVSAMQSGILYGYVGQVEGIVKRMKEEAKQEPKVIATGGLAK------LISEESNV--IDVVDPF-LTLKGLYMLY 250 (268)
T ss_dssp SCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCEEEEESTTHH------HHHHHCSS--CSEECTT-HHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCCHH------HHHhhCCC--CCEECcc-hHHHHHHHHH
Confidence 4556666666666666666666555442111112247999999864 23344432 2234454 4567876654
Q ss_pred h
Q 003290 378 A 378 (833)
Q Consensus 378 a 378 (833)
.
T Consensus 251 ~ 251 (268)
T 2h3g_X 251 E 251 (268)
T ss_dssp H
T ss_pred H
Confidence 3
No 159
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=33.56 E-value=2.2e+02 Score=24.01 Aligned_cols=88 Identities=8% Similarity=0.069 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHhhhc--------CCCCCHHHHHHHHHHHHhccchHHHHHHhhhcchHHHHHHHHHHHHHHHHhhcC
Q 003290 635 RELFTSKLQETEDWLYED--------GEDETKGVYVAKLEELKKQGDPIEERYKEFTDRSSVIDQLAYCINSYREAALSS 706 (833)
Q Consensus 635 r~~i~~~l~e~~~WL~~~--------g~~a~~~~~~~kl~~L~~~~~pi~~R~~e~~~rp~a~~~l~~~l~~~~~~~~~~ 706 (833)
...+...++++..||.+- ....+.+.+..++++.+.+...|..+ -..+ ......+..++..
T Consensus 4 L~~f~~~l~el~~WL~e~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~-------~~~v---~~v~~~g~~L~~~- 72 (118)
T 3uul_A 4 LDSYQIALEEVLTWLLSAEDTFQEQDDISDDVEDVKEQFATHETFMMELSAH-------QSSV---GSVLQAGNQLMTQ- 72 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCCCCSSHHHHHHHHHHHHHHHHHHHHH-------HHHH---HHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHH-------HHHH---HHHHHHHHHHHHh-
Confidence 456777888888888641 12344566666666666665444443 1122 2222233344432
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 003290 707 DPKFDHIDIAEKQKVLNECADAEAWVREKKQ 737 (833)
Q Consensus 707 ~~~~~~~~~~e~~~v~~~~~~~~~Wl~~~~~ 737 (833)
.|.+.++...|...++.+..-|+....
T Consensus 73 ----~~~~~~~~~~i~~~l~~l~~rw~~L~~ 99 (118)
T 3uul_A 73 ----GTLSDEEEFEIQEQMTLLNARWEALRV 99 (118)
T ss_dssp ----TCSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----CCCChhHHHHHHHHHHHHHHHHHHHHH
Confidence 356677777888888777666655443
No 160
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=33.53 E-value=2.3e+02 Score=29.00 Aligned_cols=22 Identities=14% Similarity=0.253 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 003290 717 EKQKVLNECADAEAWVREKKQQ 738 (833)
Q Consensus 717 e~~~v~~~~~~~~~Wl~~~~~~ 738 (833)
++..+...++++..|+.++...
T Consensus 218 ~~~~f~~~~~e~~~Wl~ek~~~ 239 (326)
T 3kbt_A 218 DLHRYFYTGAEILGLIDEKHRE 239 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 4566777899999999986654
No 161
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=33.21 E-value=1.4e+02 Score=32.91 Aligned_cols=52 Identities=13% Similarity=-0.025 Sum_probs=33.0
Q ss_pred CceEEEEEeCCceEEEEEEEEeCCe---EEEEEeeCCCCc---ccHHHHHHHHHHHHH
Q 003290 193 QLNVAFVDIGHASLQVCIAGFKKGQ---LKILGHSFDRSV---GGRDFDEVLFQHFAA 244 (833)
Q Consensus 193 ~~~vlv~D~Gggt~dvsvv~~~~~~---~~vl~~~~d~~l---GG~~~D~~l~~~l~~ 244 (833)
...++.+|+||.++-+.++...+.. +......-...+ +|..+=..|++.+.+
T Consensus 60 ~G~~laiDlGGTnirv~lV~~~G~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~ 117 (457)
T 2yhx_A 60 AGSFLAIVMGGGDLEVILISLAGRQESSIXASRSLAAAMSTTAIPSDLWGNXAXSNAA 117 (457)
T ss_dssp CEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCTTTTSCSCTHHHHHHHHHHHHH
T ss_pred cceEEEEEeCCCeEEEEEEEeCCCeeEEEeeEEEEcCCccCCCCHHHHHHHHHHHHHH
Confidence 4568999999999999999998765 222222222232 566655555555443
No 162
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=33.11 E-value=25 Score=37.00 Aligned_cols=71 Identities=17% Similarity=0.051 Sum_probs=38.9
Q ss_pred ecHHHHHHHHHHH----HHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHhCCC----CCCCCCchhHH
Q 003290 298 IKRDEFEQISAPI----LERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKE----PRRTMNASECV 369 (833)
Q Consensus 298 itr~efe~l~~~~----~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg~~----~~~~~npdeav 369 (833)
++.++.+++.+.+ +++|...+.+++.+.++ ..|+.+||+ +++...+.+.++.. .....+.+-+-
T Consensus 243 ~~~~~~~~lA~~~~~~q~~~I~~av~~v~~~~~~-----~~vv~aG~G---~~L~~~la~~~~~~~~~~~i~~~~s~vap 314 (334)
T 3cet_A 243 ISEIDAENIAKNYYELWKELILENVENVAEKYGS-----KKVVITGLG---ENILKDALADFEVISVAERYGKDVSLATP 314 (334)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CEEEEESTT---HHHHHHHTTTSEEEEHHHHHCHHHHHSHH
T ss_pred cChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-----CeEEEeCCc---HHHHHHHHhhCCeeehhcccCcccccccC
Confidence 3566666666654 44555555566655443 379999987 45555554332110 00012345577
Q ss_pred HhHHHHh
Q 003290 370 ARGCALQ 376 (833)
Q Consensus 370 a~Gaa~~ 376 (833)
|+|+|++
T Consensus 315 A~avA~l 321 (334)
T 3cet_A 315 SFAVAEL 321 (334)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8888855
No 163
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=32.66 E-value=45 Score=34.43 Aligned_cols=46 Identities=11% Similarity=0.159 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHhCC
Q 003290 309 PILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGK 357 (833)
Q Consensus 309 ~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg~ 357 (833)
.....+...++++|++++++++||+.|++.|+++++- +.+.+.||.
T Consensus 209 ~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~~---d~~~~~lg~ 254 (313)
T 1zow_A 209 FAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRIM---ESARERLGI 254 (313)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHHH---HHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHH---HHHHHHhCC
Confidence 3456777889999999999999999999999986543 457778874
No 164
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=32.54 E-value=44 Score=34.96 Aligned_cols=47 Identities=11% Similarity=0.290 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHhCCC
Q 003290 309 PILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKE 358 (833)
Q Consensus 309 ~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg~~ 358 (833)
-....+...++++|+++|++++||++|++.+++.++ -+.+.+.||.+
T Consensus 221 ~~~~~~~~~i~~aL~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~~ 267 (331)
T 2x3e_A 221 QAVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTRI---LAAVADQLDLP 267 (331)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHH---HHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCCC
Confidence 345667788899999999999999999999998765 34577888743
No 165
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=32.37 E-value=84 Score=26.75 Aligned_cols=23 Identities=4% Similarity=0.203 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Q 003290 717 EKQKVLNECADAEAWVREKKQQQ 739 (833)
Q Consensus 717 e~~~v~~~~~~~~~Wl~~~~~~q 739 (833)
++..+.+.++++..||.+.-...
T Consensus 3 ~L~~F~~~l~el~~WL~~~e~~l 25 (119)
T 3uun_A 3 NLDRYQTALEEVLSWLLSAEDTL 25 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHH
Confidence 56777888888888887764443
No 166
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=32.12 E-value=14 Score=40.95 Aligned_cols=54 Identities=13% Similarity=0.101 Sum_probs=33.9
Q ss_pred HHHHHHHHHHcC---CccEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceEEEEEEEE
Q 003290 153 RRAVIDAATIAG---LHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGF 213 (833)
Q Consensus 153 R~al~~Aa~~AG---l~~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~ 213 (833)
.+.|++|++.-| ++++.|+|+.+|..++.+... +...+-+=+|-||=-+.+-++
T Consensus 187 v~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~-------~~~~iGlI~GTGtNa~Y~E~~ 243 (470)
T 3f9m_A 187 VGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYED-------HQCEVGMIVGTGCNACYMEEM 243 (470)
T ss_dssp HHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTC-------TTEEEEEEESSSEEEEEEEEG
T ss_pred HHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCC-------CCceEEEEEecCCceEEeeec
Confidence 344445555555 568899999999988776432 344444557888664444343
No 167
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=31.91 E-value=4.2e+02 Score=26.84 Aligned_cols=25 Identities=20% Similarity=0.391 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc
Q 003290 717 EKQKVLNECADAEAWVREKKQQQDA 741 (833)
Q Consensus 717 e~~~v~~~~~~~~~Wl~~~~~~q~~ 741 (833)
.+..+...+.++..||.+....-..
T Consensus 220 ~~~~F~~~~~~l~~Wl~~~~~~l~~ 244 (323)
T 3edv_A 220 DKFRFFSMVRDLMLWMEDVIRQIEA 244 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4557788899999999988776654
No 168
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=31.83 E-value=21 Score=41.07 Aligned_cols=48 Identities=23% Similarity=0.347 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHHcCCCC--CCccEEEEeCCCCChHHHHHHHHHHhC
Q 003290 309 PILERVKRPLEKALAETGLSV--EDVHMVEVVGSSSRVPAIIKILTEFFG 356 (833)
Q Consensus 309 ~~~~~i~~~i~~~l~~~~~~~--~~i~~ViLvGG~sriP~v~~~l~~~fg 356 (833)
||=..|++-|..+.....++. +=.+.|++|||++.+|++.-.|.+.+.
T Consensus 476 pLdkAIi~SIt~a~~~~d~~k~~~~y~nilivGggski~g~~~~L~dri~ 525 (655)
T 4am6_A 476 PLEKAIVQSIANASITADVTRMNSFYSNILIVGGSSKIPALDFILTDRIN 525 (655)
T ss_dssp CHHHHHHHHHHHHHHTSCGGGHHHHHTCEEEESTTCCCTTHHHHHHHHHH
T ss_pred cHHHHHHHHHHhhhccccHHHHHHHhhcEEEEcCcccCccHHHHHHHHHH
Confidence 444455555554332212221 124789999999999999999999885
No 169
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=31.61 E-value=35 Score=28.20 Aligned_cols=28 Identities=21% Similarity=0.213 Sum_probs=25.9
Q ss_pred EEEEecCccCHHHHHHHHHHHHHcCCcc
Q 003290 140 CCIGIPVYFTDLQRRAVIDAATIAGLHP 167 (833)
Q Consensus 140 ~VITVP~~f~~~qR~al~~Aa~~AGl~~ 167 (833)
-.++.|+.++..||..+...|+..||.-
T Consensus 34 ~~l~FP~sLs~~eR~~IH~lA~~~GL~h 61 (86)
T 1msz_A 34 MQLEFPPSLNSHDRLRVHQIAEEHGLRH 61 (86)
T ss_dssp SEEEECTTCCSHHHHHHHHHHHHTTEEE
T ss_pred cEEEcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 5899999999999999999999999864
No 170
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=31.60 E-value=1.1e+02 Score=33.85 Aligned_cols=33 Identities=15% Similarity=0.310 Sum_probs=24.9
Q ss_pred CceEEEEEeCCceEEEEEEEEeCCe-----EEEEEeeC
Q 003290 193 QLNVAFVDIGHASLQVCIAGFKKGQ-----LKILGHSF 225 (833)
Q Consensus 193 ~~~vlv~D~Gggt~dvsvv~~~~~~-----~~vl~~~~ 225 (833)
...+|.+|+||.+|-|++|++.++. +++....+
T Consensus 76 ~G~fLAlDlGGTNfRV~~V~L~g~~~~~~~~~~~~~~~ 113 (470)
T 3f9m_A 76 VGDFLSLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMY 113 (470)
T ss_dssp CEEEEEEEESSSEEEEEEEEEEC----CEEEEEEEEEE
T ss_pred ceEEEEEEecCceEEEEEEEECCCCCCcceEEEEEEee
Confidence 4569999999999999999998653 55554443
No 171
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=30.33 E-value=46 Score=34.92 Aligned_cols=46 Identities=24% Similarity=0.323 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHhCCC
Q 003290 310 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKE 358 (833)
Q Consensus 310 ~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg~~ 358 (833)
....+...|+++|+++|++++||++|++.|+++++ -+.+.+.||.+
T Consensus 229 ~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg~~ 274 (339)
T 1mzj_A 229 AVADVVPAAREALEVAGLTVGDLVAFVPHQANLRI---IDVLVDRLGVP 274 (339)
T ss_dssp HHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHHH---HHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHhCCC
Confidence 45667788999999999999999999999988764 34677888743
No 172
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=29.55 E-value=22 Score=36.58 Aligned_cols=66 Identities=9% Similarity=0.002 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCC-CccEEEEeCCCCChHHHHHHHHHHhCCCCCCCCCchhHHHhHHHHhch
Q 003290 308 APILERVKRPLEKALAETGLSVE-DVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCA 378 (833)
Q Consensus 308 ~~~~~~i~~~i~~~l~~~~~~~~-~i~~ViLvGG~sriP~v~~~l~~~fg~~~~~~~npdeava~Gaa~~aa 378 (833)
..++++....+-..+ . +..- +...|+|.||.+.. +.+.|++.+..+...-..+..+.++||++++.
T Consensus 211 ~~i~~~~~~~La~~i-~--~~~~~~p~~vvlgGGv~~~--l~~~l~~~l~~~~~~i~~~~~a~~~GAa~la~ 277 (291)
T 1zxo_A 211 RQLVMNSFIAFFRRN-V--MQYDYKQYPVHFIGSIAYC--YKEILQDAARQTGIQIGKILQSPMEGLIQYHS 277 (291)
T ss_dssp THHHHHHHHHHHTTT-G--GGSCTTTSCEEECSHHHHH--THHHHHHHTTTTTCCEEEECSCTHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHH-h--cccCCCCceEEEECcHHHH--HHHHHHHHHhcCCcEEeecCCCHHHHHHHHHH
Confidence 344555555554444 2 2222 56788888888765 55666666643211112345678899998764
No 173
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=29.09 E-value=33 Score=36.91 Aligned_cols=48 Identities=10% Similarity=0.069 Sum_probs=33.4
Q ss_pred CccEEEEeCCCCChHH-HHHHHHHHhCC----CCCCCCCchhHHHhHHHHhch
Q 003290 331 DVHMVEVVGSSSRVPA-IIKILTEFFGK----EPRRTMNASECVARGCALQCA 378 (833)
Q Consensus 331 ~i~~ViLvGG~sriP~-v~~~l~~~fg~----~~~~~~npdeava~Gaa~~aa 378 (833)
+++.|+|.||.+..+. +.+.|.+.+.. .+......+.+.++||+..+.
T Consensus 295 ~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~~ 347 (381)
T 1saz_A 295 EVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVLR 347 (381)
T ss_dssp CCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHHc
Confidence 5789999999987544 77888877752 122233344689999998764
No 174
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=28.26 E-value=52 Score=33.48 Aligned_cols=72 Identities=15% Similarity=0.182 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHhCC-------CCCCCCCchhHHHhHH
Q 003290 301 DEFEQISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGK-------EPRRTMNASECVARGC 373 (833)
Q Consensus 301 ~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg~-------~~~~~~npdeava~Ga 373 (833)
....++++.....+...+..++...+ ++.|+|.||.+..+.+.+.|++.+.. ++......+.+.++||
T Consensus 208 ~~a~~i~~~~~~~L~~~i~~l~~~l~-----p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GA 282 (289)
T 2aa4_A 208 EQAQQLIHRSARTLARLIADIKATTD-----CQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGA 282 (289)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC-----CSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC-----CCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHH
Q ss_pred HHhc
Q 003290 374 ALQC 377 (833)
Q Consensus 374 a~~a 377 (833)
|.++
T Consensus 283 a~l~ 286 (289)
T 2aa4_A 283 ALLA 286 (289)
T ss_dssp HHHH
T ss_pred HHHH
No 175
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=27.85 E-value=41 Score=36.18 Aligned_cols=20 Identities=10% Similarity=0.283 Sum_probs=18.0
Q ss_pred eEEEEEcCccceEEEEEECC
Q 003290 2 SVVGFDLGNESCIVAVARQR 21 (833)
Q Consensus 2 ~viGID~GTt~s~va~~~~~ 21 (833)
.++|||+|.|++++++++.+
T Consensus 3 ~vlgidiGgt~ik~al~d~~ 22 (381)
T 1saz_A 3 RILTINPGSTSTKLSIFEDE 22 (381)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred eEEEEECCccceeEEEEecc
Confidence 48999999999999998864
No 176
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=27.74 E-value=2.7e+02 Score=23.31 Aligned_cols=89 Identities=8% Similarity=0.052 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHHHhhhc--------CCCCCHHHHHHHHHHHHhccchHHHHHHhhhcchHHHHHHHHHHHHHHHHhhc
Q 003290 634 ERELFTSKLQETEDWLYED--------GEDETKGVYVAKLEELKKQGDPIEERYKEFTDRSSVIDQLAYCINSYREAALS 705 (833)
Q Consensus 634 er~~i~~~l~e~~~WL~~~--------g~~a~~~~~~~kl~~L~~~~~pi~~R~~e~~~rp~a~~~l~~~l~~~~~~~~~ 705 (833)
+...+...++++..||.+- ....+.+.+...++..+.+..-|..+. ..+ ......+..++..
T Consensus 3 ~L~~F~~~l~el~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~-------~~v---~~~~~~g~~L~~~ 72 (119)
T 3uun_A 3 NLDRYQTALEEVLSWLLSAEDTLQAQGEISNDVEVVKDQFHTHEGYMMDLTAHQ-------GRV---GNILQLGSKLIGT 72 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSCCSSHHHHHHHHHHHHHHHHHHHHHH-------HHH---HHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHhH-------HHH---HHHHHHHHHHHHc
Confidence 3467788888888888641 112345555555555555544443321 112 2222223333322
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 003290 706 SDPKFDHIDIAEKQKVLNECADAEAWVREKKQ 737 (833)
Q Consensus 706 ~~~~~~~~~~~e~~~v~~~~~~~~~Wl~~~~~ 737 (833)
.|.+.++...|...++.+..-|+....
T Consensus 73 -----~~~~~~~~~~i~~~l~~l~~rw~~L~~ 99 (119)
T 3uun_A 73 -----GKLSEDEETEVQEQMNLLNSRWECLRV 99 (119)
T ss_dssp -----TCSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----CCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 245667777777777777666655443
No 177
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=27.71 E-value=66 Score=34.88 Aligned_cols=48 Identities=10% Similarity=0.077 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCC-ChHHHHHHHHHHhC
Q 003290 306 ISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSS-RVPAIIKILTEFFG 356 (833)
Q Consensus 306 l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-riP~v~~~l~~~fg 356 (833)
.++-++.+|.+.|-......+ -.+|.|+++||-. +.+.||+.|.+.++
T Consensus 317 A~d~f~yri~k~IGa~aa~L~---G~vDaIVFTgGIGEns~~vR~~v~~~l~ 365 (415)
T 3sk3_A 317 AMDVYCHRLAKYIGSYTALMD---GRLDAVVFTGGIGENAAMVRELSLGKLG 365 (415)
T ss_dssp HHHHHHHHHHHHHHHGGGGST---TCCCEEEEEHHHHTTCHHHHHHHHHTCG
T ss_pred HHHHHHHHHHHHHHHHHHHhC---CCCCEEEECCccccCCHHHHHHHHhhch
Confidence 445556666665544432221 2489999999997 79999999987663
No 178
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=26.18 E-value=64 Score=33.61 Aligned_cols=45 Identities=11% Similarity=0.166 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHhCC
Q 003290 310 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGK 357 (833)
Q Consensus 310 ~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg~ 357 (833)
....+...++++|+++|++++||+.|++.++++++ -+.+.+.||.
T Consensus 230 ~~~~~~~~i~~al~~agl~~~dId~~~~H~~~~~~---~~~~~~~lg~ 274 (335)
T 1u6e_A 230 AAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRI---NELLVKNLQL 274 (335)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCHHH---HHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHcCC
Confidence 45677788999999999999999999999998765 3446777774
No 179
>3r9p_A ACKA; ssgcid, seattle structural genomics center for infectious DI acetate kinase, transferase; HET: PGE; 1.90A {Mycobacterium avium subsp} PDB: 3p4i_A 4dq8_A
Probab=25.95 E-value=1.6e+02 Score=31.43 Aligned_cols=131 Identities=7% Similarity=-0.007 Sum_probs=0.0
Q ss_pred eEEEEEeCCceEEEEEEEEeCCeEEEEEeeCCCCcccH-------HHHHHHHHHHHHHHHhhhccCccCCHHHHHHHHHH
Q 003290 195 NVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGR-------DFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVA 267 (833)
Q Consensus 195 ~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~d~~lGG~-------~~D~~l~~~l~~~~~~k~~~~~~~~~~~~~rL~~~ 267 (833)
+++++-+|+| +|++.+.+|+. |=.+-|-..+.|- ++|-.+.-|++.+ ...+...+.+++..
T Consensus 196 ~lIv~HLGnG---aSv~Ai~~Gks-vDtsmG~tpleGl~mgtRsGdiDp~~l~~l~~~--------~g~s~~ei~~~Lnk 263 (391)
T 3r9p_A 196 KQIVLHLGNG---CSASAIAGTRP-LDTSMGLTPLEGLVMGTRSGDIDPSIVSYLCHT--------AGMGVDDVESMLNH 263 (391)
T ss_dssp EEEEEEESSS---EEEEEEETTEE-EEESCCSSTTSSSCCSSCCCSCCTHHHHHHHHH--------SCCCHHHHHHHHHH
T ss_pred CEEEEEeCCC---cEeEEEECCEE-EeeCCCCCcccCCCCCCCCCCCChHHHHHHHHh--------cCCCHHHHHHHHHh
Q ss_pred HHHHhhhcCCCCceeEEEeccccCccceEEecHHHHH------HHHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCC
Q 003290 268 CEKLKKVLSANPEAPLNIECLMEEKDVRGFIKRDEFE------QISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSS 341 (833)
Q Consensus 268 aek~K~~LS~~~~~~~~ie~l~~~~d~~~~itr~efe------~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~ 341 (833)
---++-.+..++- |+-++ +-++-.++-+..-|.+.+-..-.....+|.|+++||-
T Consensus 264 ~SGLlglsG~~D~-------------------R~v~~~~~~gd~~A~lA~d~f~yri~k~Iga~aa~Lg~vDaIVfTGGI 324 (391)
T 3r9p_A 264 RSGVVGLSGVRDF-------------------RRLRELIESGDGAAQLAYSVFTHRLRKYIGAYLAVLGHTDVISFTAGI 324 (391)
T ss_dssp SCHHHHHHSCSCS-------------------HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSSCCEEEEEHHH
T ss_pred ccCceeecCCCCH-------------------HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECccc
Q ss_pred CC-hHHHHHHHHHHhC
Q 003290 342 SR-VPAIIKILTEFFG 356 (833)
Q Consensus 342 sr-iP~v~~~l~~~fg 356 (833)
+. .+.|++.|.+.++
T Consensus 325 gens~~vR~~i~~~l~ 340 (391)
T 3r9p_A 325 GENDAAVRRDAVSGME 340 (391)
T ss_dssp HHHCHHHHHHHHTTCG
T ss_pred ccCCHHHHHHHHHHHH
No 180
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=25.54 E-value=1.7e+02 Score=32.11 Aligned_cols=33 Identities=15% Similarity=0.372 Sum_probs=26.2
Q ss_pred CceEEEEEeCCceEEEEEEEEeCCeEEEEEeeCC
Q 003290 193 QLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFD 226 (833)
Q Consensus 193 ~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~d 226 (833)
...+|.+|+||.++-|++|++.++ +++....+.
T Consensus 58 ~G~~LAlDlGGTn~RV~~V~l~g~-~~~~~~~~~ 90 (445)
T 3hm8_A 58 RGDFLALDLGGTNFRVLLVRVTTG-VQITSEIYS 90 (445)
T ss_dssp CEEEEEEEESSSSEEEEEEEESSS-EEEEEEEEC
T ss_pred eeEEEEEEecCCeEEEEEEEECCc-eEEEEEEec
Confidence 456899999999999999999776 655554444
No 181
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=25.36 E-value=72 Score=33.34 Aligned_cols=48 Identities=17% Similarity=0.195 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHhCCC
Q 003290 308 APILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKE 358 (833)
Q Consensus 308 ~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg~~ 358 (833)
...++.+...++++|+++|++.+||+++++..++.+ +-+.+.+.+|.+
T Consensus 230 ~~~~~~~~~~i~~~l~~~gl~~~did~~~~Hq~~~~---i~~~~~~~lgl~ 277 (333)
T 4dfe_A 230 KLAVNVLEKVAVEALEKANLSAEQIDWLIPHQANIR---IMQSTCRKLGLP 277 (333)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHH---HHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH---HHHHHHHHhCCC
Confidence 445567778889999999999999999999998865 456777888754
No 182
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=24.74 E-value=1.4e+02 Score=30.84 Aligned_cols=48 Identities=13% Similarity=0.170 Sum_probs=32.1
Q ss_pred CccEEEEeCCCCCh-----HHHHHHHHHHhCCC-------CCCCCCchhHHHhHHHHhch
Q 003290 331 DVHMVEVVGSSSRV-----PAIIKILTEFFGKE-------PRRTMNASECVARGCALQCA 378 (833)
Q Consensus 331 ~i~~ViLvGG~sri-----P~v~~~l~~~fg~~-------~~~~~npdeava~Gaa~~aa 378 (833)
+.+.|+|-||.++. +.+++.|++.+... +....-.+.+.++|||.++.
T Consensus 239 dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~ 298 (310)
T 3htv_A 239 DPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAH 298 (310)
T ss_dssp CCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHH
T ss_pred CCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 46789888888775 45777777665211 12222456899999998774
No 183
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=24.50 E-value=52 Score=33.59 Aligned_cols=19 Identities=21% Similarity=0.240 Sum_probs=17.1
Q ss_pred EEEEEcCccceEEEEEE-CC
Q 003290 3 VVGFDLGNESCIVAVAR-QR 21 (833)
Q Consensus 3 viGID~GTt~s~va~~~-~~ 21 (833)
++.||.|+|+++++++. ++
T Consensus 25 ~L~IDiGNT~ik~g~~~~~~ 44 (271)
T 2f9w_A 25 ILELDCGNSLIKWRVIEGAA 44 (271)
T ss_dssp EEEEEECSSCEEEEEEETTT
T ss_pred EEEEEeCCCeeEEEEEeCCC
Confidence 68999999999999998 54
No 184
>2y6x_A PSB27, photosystem II 11 KD protein; photosynthesis; 1.60A {Thermosynechococcus elongatus}
Probab=24.47 E-value=3.5e+02 Score=23.46 Aligned_cols=95 Identities=15% Similarity=0.047 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhccchHHHHHHh--hhcchHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 003290 635 RELFTSKLQETEDWLYEDGEDETKGVYVAKLEELKKQGDPIEERYKE--FTDRSSVIDQLAYCINSYREAALSSDPKFDH 712 (833)
Q Consensus 635 r~~i~~~l~e~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~R~~e--~~~rp~a~~~l~~~l~~~~~~~~~~~~~~~~ 712 (833)
.+.-.+.++.+++-|..+..+..+.+ -..+++..++....||+- .-..-...-.++.+||..--...+.. ...
T Consensus 13 ~~dT~~Vv~~lr~~l~l~~d~~~~~~---a~~~ar~~ind~vsrYRr~~~v~g~~Sfttm~tAlNaLAGHY~s~g--~~P 87 (113)
T 2y6x_A 13 REDTLALISSLREAIALPENDPNKKA---AQAEARKKLNDFFALYRRDDSLRSLSSFMTMQTALNSLAGHYSSYP--NRP 87 (113)
T ss_dssp HHHHHHHHHHHHHHHHSCTTCTTHHH---HHHHHHHHHHHHHHHHTTCHHHHTSHHHHHHHHHHHHHHHHHHHCT--TSC
T ss_pred HHHHHHHHHHHHHHHcCCCCCccHHH---HHHHHHHHHHHHHHHhcCCCCccccchHHHHHHHHHHHHHHHhhcC--CCC
Confidence 44445555666666665444455444 446667777777777763 33455566777888887776666555 446
Q ss_pred CCHHHHHHHHHHHHHHHHHHHH
Q 003290 713 IDIAEKQKVLNECADAEAWVRE 734 (833)
Q Consensus 713 ~~~~e~~~v~~~~~~~~~Wl~~ 734 (833)
++++-++.|...++.++.-|..
T Consensus 88 lPek~k~Rl~~el~~AE~al~R 109 (113)
T 2y6x_A 88 LPEKLKARLEQEFKQVELALDR 109 (113)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998887754
No 185
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=23.77 E-value=59 Score=34.96 Aligned_cols=47 Identities=17% Similarity=0.304 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHhCCC
Q 003290 309 PILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKE 358 (833)
Q Consensus 309 ~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg~~ 358 (833)
...+.+...|+++|+++|++.+||++|++.+++.++ -+.+.+.+|.+
T Consensus 284 ~~~~~~~~~i~~aL~~agl~~~dId~~~~H~~~~~i---~d~~~~~lgl~ 330 (393)
T 1ted_A 284 YIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKI---IEQSVRSLGIS 330 (393)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSCEEECCSCHHH---HHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHcCCCHhHCCEEEECCCcHHH---HHHHHHHcCCC
Confidence 445667778899999999999999999999988664 45677777754
No 186
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=22.72 E-value=1.6e+02 Score=30.29 Aligned_cols=48 Identities=8% Similarity=-0.046 Sum_probs=31.1
Q ss_pred CccEEEEeCCCCCh----HHHHHHHHHHhC----C---------CCCCCCCchhHHHhHHHHhch
Q 003290 331 DVHMVEVVGSSSRV----PAIIKILTEFFG----K---------EPRRTMNASECVARGCALQCA 378 (833)
Q Consensus 331 ~i~~ViLvGG~sri----P~v~~~l~~~fg----~---------~~~~~~npdeava~Gaa~~aa 378 (833)
+++.|+|-||.++. +.|++.+.+... . .+....-.+.+.++|||.++.
T Consensus 224 dPe~IviGGgi~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s~lg~~a~l~GAa~l~~ 288 (302)
T 3epq_A 224 APXXIILGGGVMQQXQVFSYIYQYVPKIMNSYLDFSELSDDISDYIVPPRLGSNAGIIGTLVLAH 288 (302)
T ss_dssp CCSCEEEESSGGGCTHHHHHHHHHHHHHHTTCSCCGGGTTTGGGTEECCTTGGGHHHHHHHHHHH
T ss_pred CchhhhcCchhhhhHHHHHHHHHHHHHHHhhhccCcccccccCceEEECCcCChHHHHHHHHHHH
Confidence 46778888888765 455566665542 1 122334467899999998764
No 187
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=22.34 E-value=94 Score=32.65 Aligned_cols=50 Identities=14% Similarity=0.166 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHHHHHHHHHHhCCC
Q 003290 306 ISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKE 358 (833)
Q Consensus 306 l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~v~~~l~~~fg~~ 358 (833)
+.+..+..+...++++|+++|++.+||+++++..++.+ +.+.+.+.+|.+
T Consensus 240 v~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~~---i~~~~~~~lgl~ 289 (345)
T 3s21_A 240 LLIEGIKLAQKTFVAAKQVLGWAVEELDQFVIHQVSRP---HTAAFVKSFGID 289 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECCSCHH---HHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCHH---HHHHHHHHcCcC
Confidence 44445567778889999999999999999999998865 456777888754
No 188
>2qyw_A Vesicle transport through interaction with T-SNAR homolog; HABC domain, protein transport, endocytosis; 2.00A {Mus musculus} PDB: 2v8s_V
Probab=22.15 E-value=1.8e+02 Score=24.59 Aligned_cols=52 Identities=2% Similarity=0.068 Sum_probs=32.3
Q ss_pred hcchHHHHHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 003290 683 TDRSSVIDQLAYCINSYREAALSSDPKFDHIDIAEKQKVLNECADAEAWVRE 734 (833)
Q Consensus 683 ~~rp~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~e~~~v~~~~~~~~~Wl~~ 734 (833)
+.|-..+..+...|..+..++..++-.-..++...+..+...+.+.+.=|+.
T Consensus 45 e~rk~~i~~ie~~ldEA~eLl~qMelE~r~~p~s~R~~~~~klr~Yk~dL~~ 96 (102)
T 2qyw_A 45 EEKKKLVRDFDEKQQEANETLAEMEEELRYAPLTFRNPMMSKLRNYRKDLAK 96 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 4556666666777776666665544333345667777777777666665544
No 189
>4adz_A CSOR; transcription, copper sensor; 1.70A {Streptomyces lividans}
Probab=21.97 E-value=4.1e+02 Score=23.81 Aligned_cols=45 Identities=13% Similarity=0.149 Sum_probs=27.5
Q ss_pred CHHHHHHHHHHHHhccchHHHHHHhhhcchHHHHHH---HHHHHHHHH
Q 003290 657 TKGVYVAKLEELKKQGDPIEERYKEFTDRSSVIDQL---AYCINSYRE 701 (833)
Q Consensus 657 ~~~~~~~kl~~L~~~~~pi~~R~~e~~~rp~a~~~l---~~~l~~~~~ 701 (833)
.+..+..+|+.++.-+.-|..-+.+-......+.++ +++|+.+..
T Consensus 50 ~Kk~ll~RLkRIeGQvrGI~rMIEedr~C~DIL~QlaAVrsAL~~v~~ 97 (136)
T 4adz_A 50 QKAEHLKRLRRIEGQIRGLQRMVDEDVYCIDILTQVSASTKALQSFAL 97 (136)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 455566666666666667777777777777665544 444554443
No 190
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=21.09 E-value=2.8e+02 Score=31.72 Aligned_cols=98 Identities=14% Similarity=0.293 Sum_probs=61.9
Q ss_pred CceEEEEEeCCceEEEEEEEEeCCeEEEEEeeCCC--CcccHHHHHHHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHH
Q 003290 193 QLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDR--SVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEK 270 (833)
Q Consensus 193 ~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~d~--~lGG~~~D~~l~~~l~~~~~~k~~~~~~~~~~~~~rL~~~aek 270 (833)
..+-+-+|+|-.|+-+.++.+..|.+--.....+. .+|.+-+++.-+ +.+
T Consensus 205 ~~~GlAvDiGTTtv~~~LvdL~tG~~l~~~~~~NpQ~~~G~DVisRI~~---------------------------a~~- 256 (631)
T 3zyy_X 205 RVFGLAIDIGTTTVVVQLVDLVSGKVLGTKGNYNKQAAFGDDVISRIIY---------------------------VDE- 256 (631)
T ss_dssp CCEEEEEEECSSEEEEEEEETTTCCEEEEEEEECGGGGTCSSHHHHHHH---------------------------HHH-
T ss_pred CceEEEEEecccceeEEEEECCCCCEEEeecccCCCCCcchHHHHHHHH---------------------------Hhc-
Confidence 34568999999999999999888755333333233 244443333221 000
Q ss_pred HhhhcCCCCceeEEEeccccCccceEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEeCCCCChHH
Q 003290 271 LKKVLSANPEAPLNIECLMEEKDVRGFIKRDEFEQISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPA 346 (833)
Q Consensus 271 ~K~~LS~~~~~~~~ie~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sriP~ 346 (833)
...-++.+-+-+++.+..+|.+++.++++..++|..+.++|-.+-.-.
T Consensus 257 ----------------------------~~~g~~~L~~~v~~~in~li~~l~~~~~i~~~~I~~~~v~GNt~M~hL 304 (631)
T 3zyy_X 257 ----------------------------NPDGAEKLRKAVLSTINELIFQLCKEHGVEKKEIMAAVVAGNTTMTHL 304 (631)
T ss_dssp ----------------------------CTTHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEECHHHHHH
T ss_pred ----------------------------CcccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHeeEEEEEccHHHHHH
Confidence 001123334445677777888888999999999999999987654433
No 191
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=20.90 E-value=12 Score=38.57 Aligned_cols=60 Identities=10% Similarity=-0.111 Sum_probs=32.1
Q ss_pred cCcEEEEecCccCHHHHHHHHHHHH-HcCC-ccEEeechhHHHHHHHhhhcCCCCCCCCceEEEEEeCCceE
Q 003290 137 VVDCCIGIPVYFTDLQRRAVIDAAT-IAGL-HPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASL 206 (833)
Q Consensus 137 ~~~~VITVP~~f~~~qR~al~~Aa~-~AGl-~~~~li~EptAaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~ 206 (833)
+..+.|++|..- ......+.+..+ ..++ ..+.+.|+..||+++-. . ....+++=+|-|.-
T Consensus 58 i~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aalge~----g-----~~~~v~v~~GTGi~ 119 (291)
T 1zxo_A 58 FNAVYFYGAGCT-PEKAPVLRRAIADSLPVIGNIKANSDMLAAAHGLC----G-----QKAGIACILGTGSN 119 (291)
T ss_dssp ---CEEECTTCC-TTTTHHHHHHHHHHSCCCSCCEEECSHHHHHHHTT----T-----TSCBEEEEESSSEE
T ss_pred ccEEEEEcCCCC-HHHHHHHHHHHHHhcCCCceEEEECcHHHHHHhhc----C-----CCCcEEEEeCCChh
Confidence 345777788753 111123333333 3464 35789999999988532 1 12334444787763
No 192
>2kmf_A Photosystem II 11 kDa protein; PSB27, structure, helical bundle, cyanobacteria, photosynthesis; NMR {Synechocystis SP} PDB: 2knd_A
Probab=20.16 E-value=4.3e+02 Score=22.95 Aligned_cols=94 Identities=12% Similarity=0.038 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhccchHHHHHHh--hhcchHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 003290 635 RELFTSKLQETEDWLYEDGEDETKGVYVAKLEELKKQGDPIEERYKE--FTDRSSVIDQLAYCINSYREAALSSDPKFDH 712 (833)
Q Consensus 635 r~~i~~~l~e~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~R~~e--~~~rp~a~~~l~~~l~~~~~~~~~~~~~~~~ 712 (833)
.+.-.+.++.+++-|..+..+..+ .+-..+++..++....||+- .-..-...-.++.+||..--...+.. ...
T Consensus 17 ~~dT~~Vv~~lr~~l~l~~d~~~~---~~a~~~ar~~ind~vsrYRr~~~v~g~~Sf~tm~tAlNaLAGHY~s~g--~~P 91 (115)
T 2kmf_A 17 SQDTLTVIATLREAIDLPQDAPNR---QEVQDTARGQINDYISRYRRKGDAGGLKSFTTMQTALNSLAGYYTSYG--ARP 91 (115)
T ss_dssp HHHHHHHHHHHHHHHHSCTTCTTH---HHHHHHHHHHHHHHHHHTHHHHCSSSCHHHHHHHHHHHHHHHHHHHHS--SCC
T ss_pred HHHHHHHHHHHHHHHcCCCCCccH---HHHHHHHHHHHHHHHHHhcCCCCccccchHHHHHHHHHHHHHHHhhcC--CCC
Confidence 334444455555555544344443 44556666777777777663 34555667778888887666655444 346
Q ss_pred CCHHHHHHHHHHHHHHHHHHH
Q 003290 713 IDIAEKQKVLNECADAEAWVR 733 (833)
Q Consensus 713 ~~~~e~~~v~~~~~~~~~Wl~ 733 (833)
++++-++.|...++.++.-|.
T Consensus 92 lPek~k~Rl~~el~~AE~al~ 112 (115)
T 2kmf_A 92 IPEKLKKRLQLEFTQAERSIE 112 (115)
T ss_dssp CCHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999998887664
Done!