Query 003293
Match_columns 833
No_of_seqs 385 out of 1821
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 20:14:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003293.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003293hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3cob_A Kinesin heavy chain-lik 100.0 3.5E-46 1.2E-50 413.4 11.3 173 2-195 182-354 (369)
2 3b6u_A Kinesin-like protein KI 100.0 4.7E-46 1.6E-50 412.4 9.2 169 2-185 204-372 (372)
3 2y65_A Kinesin, kinesin heavy 100.0 6.7E-46 2.3E-50 410.9 9.1 172 2-191 187-359 (365)
4 2vvg_A Kinesin-2; motor protei 100.0 1.5E-45 5E-50 406.1 10.0 161 2-179 188-348 (350)
5 3bfn_A Kinesin-like protein KI 100.0 1.9E-45 6.6E-50 408.8 8.5 166 2-185 201-366 (388)
6 1t5c_A CENP-E protein, centrom 100.0 1.1E-44 3.9E-49 399.2 12.5 164 2-179 178-341 (349)
7 1x88_A Kinesin-like protein KI 100.0 4E-45 1.4E-49 404.5 8.4 159 1-175 201-359 (359)
8 1goj_A Kinesin, kinesin heavy 100.0 8.2E-45 2.8E-49 401.1 9.7 162 2-181 184-345 (355)
9 2owm_A Nckin3-434, related to 100.0 2E-44 6.8E-49 408.0 12.3 170 1-182 243-430 (443)
10 2zfi_A Kinesin-like protein KI 100.0 3E-44 1E-48 398.4 9.7 165 1-175 192-363 (366)
11 2wbe_C Bipolar kinesin KRP-130 100.0 1.4E-44 4.7E-49 401.7 6.1 160 1-176 211-371 (373)
12 3lre_A Kinesin-like protein KI 100.0 1.6E-43 5.4E-48 391.2 11.7 153 1-166 203-355 (355)
13 1f9v_A Kinesin-like protein KA 100.0 2.9E-43 1E-47 387.9 10.1 153 2-170 193-345 (347)
14 3t0q_A AGR253WP; kinesin, alph 100.0 3.9E-43 1.3E-47 387.4 11.0 153 2-170 196-348 (349)
15 1ry6_A Internal kinesin; kines 100.0 6.7E-43 2.3E-47 386.3 11.2 152 2-175 188-340 (360)
16 1bg2_A Kinesin; motor protein, 100.0 5.8E-43 2E-47 382.3 8.7 146 2-166 180-325 (325)
17 4a14_A Kinesin, kinesin-like p 100.0 8.4E-43 2.9E-47 384.3 9.7 155 2-164 190-344 (344)
18 2h58_A Kinesin-like protein KI 100.0 1.7E-42 5.9E-47 379.4 10.9 147 2-167 183-329 (330)
19 4etp_A Kinesin-like protein KA 100.0 1.7E-42 5.7E-47 388.9 9.5 153 2-170 249-401 (403)
20 3gbj_A KIF13B protein; kinesin 100.0 3.1E-42 1.1E-46 380.7 11.3 154 2-165 195-349 (354)
21 3nwn_A Kinesin-like protein KI 100.0 8E-43 2.7E-47 385.5 5.3 149 2-166 211-359 (359)
22 2rep_A Kinesin-like protein KI 100.0 3.9E-42 1.3E-46 381.9 10.3 147 1-166 226-376 (376)
23 3dc4_A Kinesin-like protein NO 100.0 4E-42 1.4E-46 378.0 9.8 144 2-170 196-339 (344)
24 2nr8_A Kinesin-like protein KI 100.0 1.4E-42 4.7E-47 383.5 5.1 149 2-166 210-358 (358)
25 1v8k_A Kinesin-like protein KI 100.0 2.8E-41 9.7E-46 377.5 10.3 146 1-170 259-406 (410)
26 2heh_A KIF2C protein; kinesin, 100.0 3.6E-41 1.2E-45 374.4 10.5 145 1-169 239-385 (387)
27 3u06_A Protein claret segregat 100.0 2.2E-40 7.6E-45 371.8 9.8 146 2-170 241-386 (412)
28 4h1g_A Maltose binding protein 100.0 3.7E-40 1.3E-44 396.4 11.1 148 2-167 565-712 (715)
29 2kin_B Kinesin; motor protein, 100.0 6.3E-31 2.2E-35 238.1 4.3 98 87-188 1-99 (100)
30 3kin_B Kinesin heavy chain; mo 100.0 1.3E-28 4.4E-33 230.2 9.8 88 91-182 1-88 (117)
31 1wt6_A Myotonin-protein kinase 97.5 0.00036 1.2E-08 59.5 8.3 63 644-706 10-72 (81)
32 1i84_S Smooth muscle myosin he 97.1 0.00063 2.2E-08 86.2 9.1 12 135-146 676-687 (1184)
33 1i84_S Smooth muscle myosin he 97.1 0.0011 3.8E-08 84.0 10.8 12 63-74 460-471 (1184)
34 3ol1_A Vimentin; structural ge 94.8 0.48 1.7E-05 43.9 13.6 102 327-432 13-114 (119)
35 2v71_A Nuclear distribution pr 94.5 4.2 0.00014 40.5 21.4 55 328-393 11-65 (189)
36 2dfs_A Myosin-5A; myosin-V, in 94.2 1.1 3.7E-05 56.1 19.0 15 134-148 653-667 (1080)
37 3na7_A HP0958; flagellar bioge 93.7 7.5 0.00026 40.4 26.0 13 488-500 174-186 (256)
38 3na7_A HP0958; flagellar bioge 93.5 8.1 0.00028 40.1 23.8 12 412-423 154-165 (256)
39 2dfs_A Myosin-5A; myosin-V, in 93.1 2.2 7.6E-05 53.4 18.9 86 384-469 960-1045(1080)
40 2v71_A Nuclear distribution pr 92.7 8.7 0.0003 38.2 20.6 30 205-234 10-39 (189)
41 3o0z_A RHO-associated protein 91.7 10 0.00035 36.9 17.9 62 299-360 11-74 (168)
42 1c1g_A Tropomyosin; contractIl 90.1 16 0.00056 36.4 44.1 26 334-359 6-31 (284)
43 3oja_B Anopheles plasmodium-re 86.7 6.2 0.00021 45.5 14.4 47 452-498 535-581 (597)
44 3oja_B Anopheles plasmodium-re 85.0 15 0.0005 42.4 16.4 34 407-440 529-562 (597)
45 3o0z_A RHO-associated protein 82.6 38 0.0013 33.0 19.4 75 375-456 4-78 (168)
46 3vkg_A Dynein heavy chain, cyt 81.8 99 0.0034 43.1 24.1 24 295-318 1935-1958(3245)
47 3s4r_A Vimentin; alpha-helix, 81.2 25 0.00087 30.8 12.4 72 331-422 20-91 (93)
48 3swk_A Vimentin; cytoskeleton, 80.6 7.6 0.00026 33.7 8.7 83 336-422 2-84 (86)
49 2fxo_A Myosin heavy chain, car 76.0 50 0.0017 30.6 16.4 25 334-358 34-58 (129)
50 3tnu_A Keratin, type I cytoske 75.1 41 0.0014 31.2 12.7 40 375-414 82-125 (131)
51 3tnu_B Keratin, type II cytosk 74.6 46 0.0016 30.8 12.9 39 375-413 80-122 (129)
52 3hnw_A Uncharacterized protein 69.4 52 0.0018 31.0 12.0 18 411-428 113-130 (138)
53 2v66_B Nuclear distribution pr 69.3 67 0.0023 29.2 16.8 29 531-559 73-101 (111)
54 3hnw_A Uncharacterized protein 66.4 19 0.00066 33.9 8.4 58 334-392 75-132 (138)
55 2eqb_B RAB guanine nucleotide 66.2 53 0.0018 29.1 10.4 16 375-390 45-60 (97)
56 3s4r_A Vimentin; alpha-helix, 65.6 14 0.00047 32.5 6.7 36 325-360 47-82 (93)
57 3tnu_A Keratin, type I cytoske 65.4 86 0.0029 29.0 13.4 17 437-453 109-125 (131)
58 3iox_A AGI/II, PA; alpha helix 65.1 1.7E+02 0.0059 33.0 16.8 81 329-427 4-85 (497)
59 1f5n_A Interferon-induced guan 64.9 66 0.0022 37.5 14.2 16 61-76 91-106 (592)
60 3oja_A Leucine-rich immune mol 64.9 1.6E+02 0.0056 32.7 17.4 32 424-455 433-464 (487)
61 3oja_A Leucine-rich immune mol 63.0 85 0.0029 35.0 14.6 19 376-394 366-384 (487)
62 3mq7_A Bone marrow stromal ant 62.5 93 0.0032 28.4 11.5 81 608-699 25-105 (121)
63 2efr_A General control protein 61.7 1.2E+02 0.004 29.2 22.7 95 334-432 35-129 (155)
64 3tnu_B Keratin, type II cytosk 60.5 1E+02 0.0036 28.3 14.0 17 437-453 107-123 (129)
65 2jee_A YIIU; FTSZ, septum, coi 60.5 61 0.0021 27.8 9.4 54 648-701 6-63 (81)
66 3u1c_A Tropomyosin alpha-1 cha 58.0 1E+02 0.0034 27.3 12.9 14 377-390 51-64 (101)
67 3ghg_A Fibrinogen alpha chain; 57.3 62 0.0021 36.8 11.5 18 380-397 113-130 (562)
68 1x79_B RAB GTPase binding effe 55.5 1.2E+02 0.0041 27.5 12.5 34 536-569 71-104 (112)
69 2ocy_A RAB guanine nucleotide 53.1 1.6E+02 0.0055 28.2 19.8 83 292-391 11-93 (154)
70 1go4_E MAD1 (mitotic arrest de 52.4 78 0.0027 28.2 9.2 28 332-359 17-44 (100)
71 3nmd_A CGMP dependent protein 50.3 40 0.0014 28.3 6.5 21 333-353 46-66 (72)
72 2k48_A Nucleoprotein; viral pr 49.8 1.4E+02 0.0049 26.6 10.3 62 335-396 36-101 (107)
73 3u1c_A Tropomyosin alpha-1 cha 49.7 1.4E+02 0.0047 26.4 12.7 55 331-393 41-95 (101)
74 1f5n_A Interferon-induced guan 48.1 3.2E+02 0.011 31.7 16.2 10 61-70 123-132 (592)
75 3vkg_A Dynein heavy chain, cyt 47.4 7.9E+02 0.027 34.6 28.1 26 329-354 1905-1930(3245)
76 3mq9_A Bone marrow stromal ant 46.4 2.4E+02 0.0083 31.1 14.7 20 399-418 434-453 (471)
77 3trt_A Vimentin; cytoskeleton, 46.3 84 0.0029 26.1 8.2 16 375-390 61-76 (77)
78 3ghg_A Fibrinogen alpha chain; 46.1 1.2E+02 0.0041 34.5 11.5 17 452-468 136-152 (562)
79 3mq9_A Bone marrow stromal ant 45.6 3E+02 0.01 30.3 15.2 20 376-395 442-461 (471)
80 3iox_A AGI/II, PA; alpha helix 44.6 3.9E+02 0.013 30.2 15.6 56 326-392 26-81 (497)
81 1deq_A Fibrinogen (alpha chain 44.6 3E+02 0.01 30.1 13.9 28 373-400 109-136 (390)
82 2v66_B Nuclear distribution pr 43.3 1.6E+02 0.0055 26.6 9.9 51 376-432 9-59 (111)
83 3he5_A Synzip1; heterodimeric 41.4 1E+02 0.0035 22.7 6.6 44 336-394 5-48 (49)
84 1gk4_A Vimentin; intermediate 40.9 1.7E+02 0.0057 24.9 10.8 40 375-414 31-74 (84)
85 3cve_A Homer protein homolog 1 40.0 1.3E+02 0.0043 25.3 8.0 29 332-360 19-47 (72)
86 3nmd_A CGMP dependent protein 40.0 70 0.0024 26.8 6.4 40 659-698 27-66 (72)
87 1wt6_A Myotonin-protein kinase 38.7 1.4E+02 0.0048 25.5 8.1 24 369-393 45-68 (81)
88 3mov_A Lamin-B1; LMNB1, B-type 38.4 76 0.0026 27.9 6.9 39 375-413 42-84 (95)
89 3i00_A HIP-I, huntingtin-inter 38.1 1.3E+02 0.0046 27.5 8.7 24 328-351 41-64 (120)
90 1x8y_A Lamin A/C; structural p 37.8 1.1E+02 0.0036 26.3 7.6 40 375-414 33-76 (86)
91 1ic2_A Tropomyosin alpha chain 37.1 1.9E+02 0.0064 24.4 9.7 19 376-394 33-51 (81)
92 2zqm_A Prefoldin beta subunit 36.4 2.2E+02 0.0076 25.0 12.5 61 332-392 18-92 (117)
93 4fi5_A Nucleoprotein; structur 36.3 1.6E+02 0.0056 26.6 8.6 35 364-398 56-90 (113)
94 3u59_A Tropomyosin beta chain; 36.1 2.2E+02 0.0076 24.9 12.7 51 334-392 44-94 (101)
95 2yy0_A C-MYC-binding protein; 35.7 63 0.0022 25.4 5.3 35 201-235 15-49 (53)
96 1ci6_A Transcription factor AT 34.3 1.7E+02 0.0059 23.5 7.9 47 651-705 10-56 (63)
97 2eqb_B RAB guanine nucleotide 34.3 2.5E+02 0.0084 24.9 13.2 55 298-357 9-63 (97)
98 2i1j_A Moesin; FERM, coiled-co 33.2 34 0.0011 39.8 4.8 28 332-359 333-360 (575)
99 3u59_A Tropomyosin beta chain; 32.1 2.6E+02 0.0089 24.5 12.8 23 334-356 23-45 (101)
100 3a7p_A Autophagy protein 16; c 32.0 3.4E+02 0.012 25.9 12.6 113 370-491 35-148 (152)
101 3i00_A HIP-I, huntingtin-inter 31.0 2.8E+02 0.0094 25.4 9.6 44 343-390 17-60 (120)
102 3cvf_A Homer-3, homer protein 29.2 1.1E+02 0.0039 26.0 6.2 29 332-360 25-53 (79)
103 2ic9_A Nucleocapsid protein; h 28.7 3E+02 0.01 24.2 9.1 35 364-398 39-73 (96)
104 2ic6_A Nucleocapsid protein; h 28.6 2.7E+02 0.0093 23.6 9.2 61 336-396 7-71 (78)
105 1fxk_A Prefoldin; archaeal pro 28.0 2.9E+02 0.01 23.8 11.1 24 332-355 13-36 (107)
106 1gd2_E Transcription factor PA 26.8 1.9E+02 0.0063 24.0 6.9 44 660-703 24-67 (70)
107 1gk4_A Vimentin; intermediate 25.6 3.1E+02 0.01 23.2 9.2 49 416-464 2-50 (84)
108 1ik9_A DNA repair protein XRCC 24.5 3.5E+02 0.012 27.1 10.0 26 335-360 140-165 (213)
109 1gmj_A ATPase inhibitor; coile 24.4 2.3E+02 0.0078 24.4 7.2 13 407-419 50-62 (84)
110 1gd2_E Transcription factor PA 23.3 2E+02 0.0068 23.9 6.5 23 370-392 22-44 (70)
111 3q8t_A Beclin-1; autophagy, AT 23.0 3.8E+02 0.013 23.4 11.9 92 301-405 4-96 (96)
112 1t2k_D Cyclic-AMP-dependent tr 22.5 1.8E+02 0.0062 23.0 6.0 31 675-705 25-55 (61)
113 1l8d_A DNA double-strand break 21.6 4E+02 0.014 23.2 9.6 81 536-622 11-92 (112)
114 2xdj_A Uncharacterized protein 21.4 3.8E+02 0.013 22.8 8.8 50 658-707 20-69 (83)
115 1jnm_A Proto-oncogene C-JUN; B 21.1 1.4E+02 0.0047 23.9 5.0 33 673-705 23-55 (62)
116 3bas_A Myosin heavy chain, str 21.0 3.9E+02 0.013 22.8 11.9 74 300-393 13-86 (89)
117 2w83_C C-JUN-amino-terminal ki 20.8 3.3E+02 0.011 23.0 7.2 47 327-388 30-76 (77)
118 3ol1_A Vimentin; structural ge 20.8 4.7E+02 0.016 23.6 16.5 73 377-452 41-113 (119)
119 2e7s_A RAB guanine nucleotide 20.7 1.7E+02 0.0057 27.5 6.1 117 379-495 3-126 (135)
120 3iv1_A Tumor susceptibility ge 20.5 3.9E+02 0.013 22.6 9.9 22 370-391 11-32 (78)
No 1
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A*
Probab=100.00 E-value=3.5e-46 Score=413.41 Aligned_cols=173 Identities=44% Similarity=0.664 Sum_probs=156.4
Q ss_pred HHHHHHHhhcCccccCCCCcccCcceeeeEEEEEeeeccCCCCCCCCCCCCCccchhhhceeeeeecCCCccccccCCcc
Q 003293 2 AACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDG 81 (833)
Q Consensus 2 ~~~l~~G~~~R~~~~T~~N~~SSRSHaIfti~i~q~~~~~~~~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~kt~~~g 81 (833)
..+|..|..+|++++|.||..|||||+||+|+|++.... ......|+|+|||||||||..++++.|
T Consensus 182 ~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~--------------~~~~~~skL~lVDLAGSEr~~~t~~~g 247 (369)
T 3cob_A 182 KTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQ--------------TQAIARGKLSFVDLAGSERVKKSGSAG 247 (369)
T ss_dssp HHHHHHHHHHTCCCSCCTTCHHHHSEEEEEEEEEEEETT--------------TCCEEEEEEEEEECCCSSCCCCCSSCS
T ss_pred HHHHHHHhhcceeecccCCCCCCcceEEEEEEEEEecCC--------------CCcEEEEEEEEEeCCCCCcccccCccc
Confidence 578999999999999999999999999999999986431 123467999999999999999999999
Q ss_pred cccchhhhhhhhhhHHHHHHHHhccccCCCCCccccCCCcchhhhhcccCCCCcceeEEeecCCCCCCHHHHHHHHHHHH
Q 003293 82 LRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYAN 161 (833)
Q Consensus 82 ~r~kE~~~IN~SL~aLg~vI~aL~~~~~~~~~~~iPyRdSkLTrLLqdsLgGns~t~mI~~VSP~~~~~~ETlsTL~fA~ 161 (833)
.+++|+.+||+||++||+||.+|+++. .||||||||||+||+|+|||||+|+|||||||+..+++||++||+||+
T Consensus 248 ~rl~E~~~INkSL~aLg~vI~aL~~~~-----~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETl~TLrfA~ 322 (369)
T 3cob_A 248 NQLKEAQSINKSLSALGDVISALSSGN-----QHIPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLDETHNSLTYAS 322 (369)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHTTC-----SCCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhcCC-----CcCCCcCCHHHHHHHHhcCCCccEEEEEEeCCccccHHHHHHHHHHHH
Confidence 999999999999999999999999864 499999999999999999999999999999999999999999999999
Q ss_pred HhhcccccccccCCcchHHHHHHHHHHHHHHHHH
Q 003293 162 RARNIQNKPIVNRDPMSTEMLKMRQQLEFLQAEL 195 (833)
Q Consensus 162 rar~I~n~p~vn~d~~~~~i~~l~~~i~~L~~el 195 (833)
||+.|+|.|++|.++ .++.+|+.++..++.+.
T Consensus 323 rak~i~~~~~~n~~~--~ei~~L~~~l~~~~~~~ 354 (369)
T 3cob_A 323 RVRSIVNDPSKNVSS--KEVARLKKLVSYWKEQA 354 (369)
T ss_dssp HHHTCBCCCCCCEEC--HHHHHHHHHTTCC----
T ss_pred HHhhcccCCcccCCH--HHHHHHHHHHHHHHHhc
Confidence 999999999999988 67778887777766654
No 2
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A*
Probab=100.00 E-value=4.7e-46 Score=412.42 Aligned_cols=169 Identities=56% Similarity=0.794 Sum_probs=133.6
Q ss_pred HHHHHHHhhcCccccCCCCcccCcceeeeEEEEEeeeccCCCCCCCCCCCCCccchhhhceeeeeecCCCccccccCCcc
Q 003293 2 AACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDG 81 (833)
Q Consensus 2 ~~~l~~G~~~R~~~~T~~N~~SSRSHaIfti~i~q~~~~~~~~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~kt~~~g 81 (833)
.++|..|..+|++++|.||..|||||+||+|+|++..... +....+..|+|+|||||||||..++++.|
T Consensus 204 ~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~-----------~~~~~~~~skL~lVDLAGSEr~~~t~~~g 272 (372)
T 3b6u_A 204 EHVMNVGNQNRSVGATNMNEHSSRSHAIFVITIECSEVGL-----------DGENHIRVGKLNLVDLAGSERQAKTGAQG 272 (372)
T ss_dssp HHHHHHHHHHHTTTCSSHHHHHHTSEEEEEEEEEEEC----------------CCCEEEEEEEEEECCCCCE--------
T ss_pred HHHHHHHHHhcCcccccCCCCCCcceEEEEEEEEEeecCC-----------CCCcceEEEEEEEEECCCCccccccCcch
Confidence 5789999999999999999999999999999999854210 11123567999999999999999999999
Q ss_pred cccchhhhhhhhhhHHHHHHHHhccccCCCCCccccCCCcchhhhhcccCCCCcceeEEeecCCCCCCHHHHHHHHHHHH
Q 003293 82 LRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYAN 161 (833)
Q Consensus 82 ~r~kE~~~IN~SL~aLg~vI~aL~~~~~~~~~~~iPyRdSkLTrLLqdsLgGns~t~mI~~VSP~~~~~~ETlsTL~fA~ 161 (833)
.+++|+.+||+||++||+||.+|++++ ..||||||||||+||+|+|||||+|+|||||||+..+++||++||+||+
T Consensus 273 ~rl~E~~~INkSL~aLg~vI~aL~~~~----~~hvPyRdSkLT~lLqdsLgGnskt~mIa~vsP~~~~~~ETlsTLrfA~ 348 (372)
T 3b6u_A 273 ERLKEATKINLSLSALGNVISALVDGK----STHIPYRDSKLTRLLQDSLGGNAKTVMVANVGPASYNVEETLTTLRYAN 348 (372)
T ss_dssp --EEEGGGCCHHHHHHHHHHHHHHCC-------CCCGGGSHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHH
T ss_pred hhhhhHhhhhhhHHHHHHHHHHHhcCC----CCCCcccccHHHHHHHHhcCCCccEEEEEEeCCcccCHHHHHHHHHHHH
Confidence 999999999999999999999999864 3599999999999999999999999999999999999999999999999
Q ss_pred HhhcccccccccCCcchHHHHHHH
Q 003293 162 RARNIQNKPIVNRDPMSTEMLKMR 185 (833)
Q Consensus 162 rar~I~n~p~vn~d~~~~~i~~l~ 185 (833)
||+.|+|+|++|.++..+.+++|+
T Consensus 349 rak~I~n~~~~n~~~~~~~~~~~~ 372 (372)
T 3b6u_A 349 RAKNIKNKPRVNEDPKDALLREFQ 372 (372)
T ss_dssp HHTTCBCCCCCCC-----------
T ss_pred HHhhccccceecCChHHHHHHhcC
Confidence 999999999999999888777653
No 3
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A*
Probab=100.00 E-value=6.7e-46 Score=410.92 Aligned_cols=172 Identities=47% Similarity=0.695 Sum_probs=134.9
Q ss_pred HHHHHHHhhcCccccCCCCcccCcceeeeEEEEEeeeccCCCCCCCCCCCCCccchhhhceeeeeecCCCccccccCCcc
Q 003293 2 AACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDG 81 (833)
Q Consensus 2 ~~~l~~G~~~R~~~~T~~N~~SSRSHaIfti~i~q~~~~~~~~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~kt~~~g 81 (833)
+.+|..|..+|++++|.||..|||||+||+|+|.+.... ......|+|+|||||||||..+++++|
T Consensus 187 ~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~--------------~~~~~~skL~lVDLAGSEr~~~t~~~g 252 (365)
T 2y65_A 187 FEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLE--------------NQKKLSGKLYLVDLAGSEKVSKTGAEG 252 (365)
T ss_dssp HHHHHHHHHHHTTTCSCHHHHHHTSEEEEEEEEEEEETT--------------TCCEEEEEEEEEECCCCCC--------
T ss_pred HHHHHHHHhhcccccccCCCCCCCceEEEEEEEEEEecC--------------CCCEeEEEEEEEECCCCCcchhcCCcc
Confidence 578999999999999999999999999999999986431 122457999999999999999999999
Q ss_pred cccchhhhhhhhhhHHHHHHHHhccccCCCCCccccCCCcchhhhhcccCCCCcceeEEeecCCCCCCHHHHHHHHHHHH
Q 003293 82 LRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYAN 161 (833)
Q Consensus 82 ~r~kE~~~IN~SL~aLg~vI~aL~~~~~~~~~~~iPyRdSkLTrLLqdsLgGns~t~mI~~VSP~~~~~~ETlsTL~fA~ 161 (833)
.+++|+.+||+||++||+||.+|+++.+ .||||||||||+||+|+|||||+|+|||||||+..+++||++||+||+
T Consensus 253 ~rl~E~~~INkSL~aLg~vI~aL~~~~~----~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~~~~~~ETl~TL~fA~ 328 (365)
T 2y65_A 253 TVLDEAKNINKSLSALGNVISALADGNK----THIPYRDSKLTRILQESLGGNARTTIVICCSPASFNESETKSTLDFGR 328 (365)
T ss_dssp --------CCHHHHHHHHHHHHHHHCCC----SCCCGGGCHHHHHTGGGTTSSSEEEEEEEECCBGGGHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCC----CCCccccCHHHHHHHhhcCCCccEEEEEEecCccCCHHHHHHHHHHHH
Confidence 9999999999999999999999998642 599999999999999999999999999999999999999999999999
Q ss_pred HhhcccccccccCCcchHHH-HHHHHHHHHH
Q 003293 162 RARNIQNKPIVNRDPMSTEM-LKMRQQLEFL 191 (833)
Q Consensus 162 rar~I~n~p~vn~d~~~~~i-~~l~~~i~~L 191 (833)
||+.|+|.|++|.++....+ .+|+.+++.+
T Consensus 329 rak~I~n~~~~n~~~~~~~~~~~~~~e~~~~ 359 (365)
T 2y65_A 329 RAKTVKNVVCVNEELTAEEWKRRYEKEKEKN 359 (365)
T ss_dssp HHTTCEEECCCEEECCSHHHHHC--------
T ss_pred HHhcccCcceeCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999877544 4466655544
No 4
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis}
Probab=100.00 E-value=1.5e-45 Score=406.07 Aligned_cols=161 Identities=52% Similarity=0.763 Sum_probs=123.2
Q ss_pred HHHHHHHhhcCccccCCCCcccCcceeeeEEEEEeeeccCCCCCCCCCCCCCccchhhhceeeeeecCCCccccccCCcc
Q 003293 2 AACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDG 81 (833)
Q Consensus 2 ~~~l~~G~~~R~~~~T~~N~~SSRSHaIfti~i~q~~~~~~~~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~kt~~~g 81 (833)
..+|..|..+|++++|.||..|||||+||+|+|++..... .......|+|+|||||||||..+++++|
T Consensus 188 ~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~------------~~~~~~~skl~lVDLAGSEr~~~t~~~g 255 (350)
T 2vvg_A 188 SALMDKGFANRHVAATQMNDTSSRSHSIFMVRIECSEVIE------------NKEVIRVGKLNLVDLAGSERQSKTGATG 255 (350)
T ss_dssp HHHHHHHHHHC----------CTTCEEEEEEEEEEEEC----------------CEEEEEEEEEEECCCCCC--------
T ss_pred HHHHHHHHhccccccccCCCCCCcceEEEEEEEEEeeccC------------CCccEEEEEEEEEeCCCCCccccccccH
Confidence 5789999999999999999999999999999999854311 1123567999999999999999999999
Q ss_pred cccchhhhhhhhhhHHHHHHHHhccccCCCCCccccCCCcchhhhhcccCCCCcceeEEeecCCCCCCHHHHHHHHHHHH
Q 003293 82 LRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYAN 161 (833)
Q Consensus 82 ~r~kE~~~IN~SL~aLg~vI~aL~~~~~~~~~~~iPyRdSkLTrLLqdsLgGns~t~mI~~VSP~~~~~~ETlsTL~fA~ 161 (833)
.+++|+.+||+||++||+||.+|++++ .||||||||||+||+|+|||||+|+|||||||+..+++||++||+||+
T Consensus 256 ~rl~E~~~IN~SL~aLg~vI~aL~~~~-----~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~~~~~~ETl~TL~fA~ 330 (350)
T 2vvg_A 256 ETLVEGAKINLSLSALGLVISKLVEGA-----THIPYRDSKLTRLLQDSLGGNSKTLMCANISPASTNYDETMSTLRYAD 330 (350)
T ss_dssp -------CTTHHHHHHHHHHHHHHHTC-----SSCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHcCC-----CCCCccccHHHHHHHHhcCCCccEEEEEEeCCccccHHHHHHHHHHHH
Confidence 999999999999999999999999865 499999999999999999999999999999999999999999999999
Q ss_pred HhhcccccccccCCcchH
Q 003293 162 RARNIQNKPIVNRDPMST 179 (833)
Q Consensus 162 rar~I~n~p~vn~d~~~~ 179 (833)
||+.|+|+|++|.||..+
T Consensus 331 rak~i~n~~~~n~~~~~~ 348 (350)
T 2vvg_A 331 RAKQIKNKPRINEDPKDA 348 (350)
T ss_dssp HHTTCBCCCCCCBSCTTC
T ss_pred HHhhccccceecCCchhc
Confidence 999999999999998653
No 5
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.9e-45 Score=408.85 Aligned_cols=166 Identities=40% Similarity=0.621 Sum_probs=112.8
Q ss_pred HHHHHHHhhcCccccCCCCcccCcceeeeEEEEEeeeccCCCCCCCCCCCCCccchhhhceeeeeecCCCccccccCCcc
Q 003293 2 AACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDG 81 (833)
Q Consensus 2 ~~~l~~G~~~R~~~~T~~N~~SSRSHaIfti~i~q~~~~~~~~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~kt~~~g 81 (833)
..+|..|..+|++++|.||..|||||+||+|+|++..... +.....|+|+|||||||||..++++.|
T Consensus 201 ~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~-------------~~~~~~skL~lVDLAGSEr~~~t~~~g 267 (388)
T 3bfn_A 201 ERHFLPASRNRTVGATRLNQRSSRSHAVLLVKVDQRERLA-------------PFRQREGKLYLIDLAGSEDNRRTGNKG 267 (388)
T ss_dssp HHHHHHHTC-----------CGGGSEEEEEEEEEEEESST-------------TCCEEEEEEEEEECCCTTC--------
T ss_pred HHHHHHHhhccccccccCCCCCCCCeEEEEEEEEEeccCC-------------CCceeEEEEEEEECCCCcccccccCcc
Confidence 5789999999999999999999999999999999864321 112357999999999999999999999
Q ss_pred cccchhhhhhhhhhHHHHHHHHhccccCCCCCccccCCCcchhhhhcccCCCCcceeEEeecCCCCCCHHHHHHHHHHHH
Q 003293 82 LRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYAN 161 (833)
Q Consensus 82 ~r~kE~~~IN~SL~aLg~vI~aL~~~~~~~~~~~iPyRdSkLTrLLqdsLgGns~t~mI~~VSP~~~~~~ETlsTL~fA~ 161 (833)
.+++|+.+||+||++||+||.+|+++. .||||||||||+||+|+|||||+|+|||||||+..+++||++||+||+
T Consensus 268 ~rlkE~~~INkSL~aLg~vI~aL~~~~-----~hVPYRdSkLTrlLqdsLgGnskT~mIa~iSP~~~~~~ETlsTLrfA~ 342 (388)
T 3bfn_A 268 LRLKESGAINTSLFVLGKVVDALNQGL-----PRVPYRDSKLTRLLQDSLGGSAHSILIANIAPERRFYLDTVSALNFAA 342 (388)
T ss_dssp ------CCCCHHHHHHHHHHHHHHTTC-----SCCCGGGSHHHHHTTTSSSTTCEEEEEEEECCSGGGHHHHHHHHHHHC
T ss_pred chhHHHhHhhhhHHHHHHHHHHHhcCC-----CCCcCcccHHHHHHHHhhCCCccEEEEEEECCccccHHHHHHHHHHHH
Confidence 999999999999999999999998764 399999999999999999999999999999999999999999999999
Q ss_pred HhhcccccccccCCcchHHHHHHH
Q 003293 162 RARNIQNKPIVNRDPMSTEMLKMR 185 (833)
Q Consensus 162 rar~I~n~p~vn~d~~~~~i~~l~ 185 (833)
||+.|+|+|++|.++....+..++
T Consensus 343 rak~I~n~p~~n~~~~~~~l~~~k 366 (388)
T 3bfn_A 343 RSKEVINRPFTNESLQPHALGPVK 366 (388)
T ss_dssp SEEEEC------------------
T ss_pred HHhhCcCcCcccCCCCHHHHHHHH
Confidence 999999999999998776655444
No 6
>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens}
Probab=100.00 E-value=1.1e-44 Score=399.15 Aligned_cols=164 Identities=46% Similarity=0.710 Sum_probs=137.9
Q ss_pred HHHHHHHhhcCccccCCCCcccCcceeeeEEEEEeeeccCCCCCCCCCCCCCccchhhhceeeeeecCCCccccccCCcc
Q 003293 2 AACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDG 81 (833)
Q Consensus 2 ~~~l~~G~~~R~~~~T~~N~~SSRSHaIfti~i~q~~~~~~~~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~kt~~~g 81 (833)
+.+|..|..+|++++|.||..|||||+||+|+|++.....+. ........|+|+|||||||||..++++.|
T Consensus 178 ~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~---------~~~~~~~~skL~lVDLAGSEr~~~t~~~g 248 (349)
T 1t5c_A 178 LKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPS---------NCEGSVKVSHLNLVDLAGSERAAQTGAAG 248 (349)
T ss_dssp HHHHHHHHHTTSSSSSSSSCTTTTCEEEEEEEEEEEECC----------------CEEEEEEEEEECCCGGGTC------
T ss_pred HHHHHHhhcccccccccCCCCCCCceEEEEEEEEEeccCCCc---------CcCccEEEEEEEEEECCCCccccccCCcc
Confidence 578999999999999999999999999999999986542110 01123567999999999999999999999
Q ss_pred cccchhhhhhhhhhHHHHHHHHhccccCCCCCccccCCCcchhhhhcccCCCCcceeEEeecCCCCCCHHHHHHHHHHHH
Q 003293 82 LRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYAN 161 (833)
Q Consensus 82 ~r~kE~~~IN~SL~aLg~vI~aL~~~~~~~~~~~iPyRdSkLTrLLqdsLgGns~t~mI~~VSP~~~~~~ETlsTL~fA~ 161 (833)
.+++|+.+||+||++||+||.+|++++. ..||||||||||+||+|+|||||+|+|||||||+ +++||++||+||+
T Consensus 249 ~rl~E~~~INkSL~aLg~vI~aL~~~~~---~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~--~~~ETlsTL~fA~ 323 (349)
T 1t5c_A 249 VRLKEGCNINRSLFILGQVIKKLSDGQV---GGFINYRDSKLTRILQNSLGGNAKTRIICTITPV--SFDETLTALQFAS 323 (349)
T ss_dssp -CCCSSSCCCHHHHHHHHHHHHHHHTCC---TTSSCGGGSHHHHHTGGGTTSSSEEEEEEEECTT--CSHHHHHHHHHHH
T ss_pred ccchhhhHHhHHHHHHHHHHHHHhccCC---CCCCcccccHHHHHHHHhcCCCceEEEEEEeCCC--CHHHHHHHHHHHH
Confidence 9999999999999999999999998753 3699999999999999999999999999999997 5899999999999
Q ss_pred HhhcccccccccCCcchH
Q 003293 162 RARNIQNKPIVNRDPMST 179 (833)
Q Consensus 162 rar~I~n~p~vn~d~~~~ 179 (833)
||+.|+|+|++|.++...
T Consensus 324 rak~I~n~~~vn~~~~~~ 341 (349)
T 1t5c_A 324 TAKYMKNTPYVNEVSTDE 341 (349)
T ss_dssp HHTTCCCCCCCCEEC---
T ss_pred HHhhcccCceeccCCCCC
Confidence 999999999999987543
No 7
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ...
Probab=100.00 E-value=4e-45 Score=404.47 Aligned_cols=159 Identities=52% Similarity=0.723 Sum_probs=127.7
Q ss_pred CHHHHHHHhhcCccccCCCCcccCcceeeeEEEEEeeeccCCCCCCCCCCCCCccchhhhceeeeeecCCCccccccCCc
Q 003293 1 MAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSD 80 (833)
Q Consensus 1 ~~~~l~~G~~~R~~~~T~~N~~SSRSHaIfti~i~q~~~~~~~~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~kt~~~ 80 (833)
++.+|..|..+|++++|.||..|||||+||+|+|++..... +....+..|+|+|||||||||.+++++.
T Consensus 201 ~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~i~~~~~~~-----------~~~~~~~~skL~lVDLAGSEr~~~t~~~ 269 (359)
T 1x88_A 201 VYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKETTI-----------DGEELVKIGKLNLVDLAGSENIGRSGAV 269 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTHHHHCEEEEEEEEEEEEECT-----------TSCEEEEEEEEEEEECCCCCC-------
T ss_pred HHHHHHHHHhhcccccccCCCCCCCccEEEEEEEEEecccC-----------CCCceEEEEEEEEEcCCCCCcccccCCc
Confidence 36799999999999999999999999999999998754311 0112356799999999999999999999
Q ss_pred ccccchhhhhhhhhhHHHHHHHHhccccCCCCCccccCCCcchhhhhcccCCCCcceeEEeecCCCCCCHHHHHHHHHHH
Q 003293 81 GLRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYA 160 (833)
Q Consensus 81 g~r~kE~~~IN~SL~aLg~vI~aL~~~~~~~~~~~iPyRdSkLTrLLqdsLgGns~t~mI~~VSP~~~~~~ETlsTL~fA 160 (833)
|.+++|+.+||+||++||+||.+|+++. .||||||||||+||+|+|||||+|+|||||||+..+++||++||+||
T Consensus 270 g~rl~E~~~INkSL~aLg~vI~aL~~~~-----~hvPyRdSkLT~lLqdsLgGnskt~mIa~vsP~~~~~~ETl~TLrfA 344 (359)
T 1x88_A 270 DKRAREAGNINQSLLTLGRVITALVERT-----PHVPYRESKLTRILQDSLGGRTRTSIIATISPASLNLEETLSTLEYA 344 (359)
T ss_dssp --------CCCHHHHHHHHHHHHHHTTC-----SCCCGGGSHHHHHTGGGSSSSSEEEEEEEECCCGGGHHHHHHHHHHH
T ss_pred ccchHHHhhhhHHHHHHHHHHHHHhcCC-----CCCccccchHHHHHHHHhCCCCeEEEEEEECCCcccHHHHHHHHHHH
Confidence 9999999999999999999999999754 49999999999999999999999999999999999999999999999
Q ss_pred HHhhcccccccccCC
Q 003293 161 NRARNIQNKPIVNRD 175 (833)
Q Consensus 161 ~rar~I~n~p~vn~d 175 (833)
+||++|+|+|+||++
T Consensus 345 ~rak~I~n~p~vn~~ 359 (359)
T 1x88_A 345 HRAKNILNKPEVNQK 359 (359)
T ss_dssp HHHTTCCCCCC----
T ss_pred HHHhhccCcceeCCC
Confidence 999999999999974
No 8
>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9
Probab=100.00 E-value=8.2e-45 Score=401.14 Aligned_cols=162 Identities=49% Similarity=0.706 Sum_probs=149.4
Q ss_pred HHHHHHHhhcCccccCCCCcccCcceeeeEEEEEeeeccCCCCCCCCCCCCCccchhhhceeeeeecCCCccccccCCcc
Q 003293 2 AACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDG 81 (833)
Q Consensus 2 ~~~l~~G~~~R~~~~T~~N~~SSRSHaIfti~i~q~~~~~~~~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~kt~~~g 81 (833)
+.+|..|..+|++++|.||..|||||+||+|+|.+.... ......|+|+|||||||||.+++++.|
T Consensus 184 ~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~--------------~~~~~~skL~lVDLAGSEr~~~t~~~g 249 (355)
T 1goj_A 184 YEVMRRGGNARAVAATNMNQESSRSHSIFVITITQKNVE--------------TGSAKSGQLFLVDLAGSEKVGKTGASG 249 (355)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGCEEEEEEEEEEEETT--------------TTEEEEEEEEEEECCCCSCCTTSSSCC
T ss_pred HHHHHHHHhhcCcccccCCCCCCCceEEEEEEEEEeccC--------------CCceeeeEEEEEECCCCCcccccccch
Confidence 678999999999999999999999999999999986431 122457999999999999999999999
Q ss_pred cccchhhhhhhhhhHHHHHHHHhccccCCCCCccccCCCcchhhhhcccCCCCcceeEEeecCCCCCCHHHHHHHHHHHH
Q 003293 82 LRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYAN 161 (833)
Q Consensus 82 ~r~kE~~~IN~SL~aLg~vI~aL~~~~~~~~~~~iPyRdSkLTrLLqdsLgGns~t~mI~~VSP~~~~~~ETlsTL~fA~ 161 (833)
.+++|+.+||+||++||+||.+|++++ ..||||||||||+||+|+|||||+|+|||||||+..+++||++||+||+
T Consensus 250 ~rl~E~~~IN~SL~aLg~vI~aL~~~~----~~hvPyRdSkLT~lLqdsLgGns~t~mI~~isP~~~~~~ETl~TL~fA~ 325 (355)
T 1goj_A 250 QTLEEAKKINKSLSALGMVINALTDGK----SSHVPYRDSKLTRILQESLGGNSRTTLIINCSPSSYNDAETLSTLRFGM 325 (355)
T ss_dssp CCTTTTGGGTSHHHHHHHHHHHHHHCS----CSCCCGGGCHHHHHTGGGTTSSCEEEEEEEECCBGGGHHHHHHHHHHHH
T ss_pred hhHHHHHhhhhHHHHHHHHHHHHhcCC----CCCCCCccCHHHHHHHHHhCCCCcEEEEEEECcccccHHHHHHHHHHHH
Confidence 999999999999999999999999864 3599999999999999999999999999999999999999999999999
Q ss_pred HhhcccccccccCCcchHHH
Q 003293 162 RARNIQNKPIVNRDPMSTEM 181 (833)
Q Consensus 162 rar~I~n~p~vn~d~~~~~i 181 (833)
||+.|+|+|++|.++...++
T Consensus 326 rak~I~n~~~vn~~~~~~~l 345 (355)
T 1goj_A 326 RAKSIKNKAKVNAELSPAEL 345 (355)
T ss_dssp HHHTCBCCCCCCSSSSCSSS
T ss_pred HHhhccCCceeCCCCCHHHH
Confidence 99999999999998876543
No 9
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa}
Probab=100.00 E-value=2e-44 Score=408.03 Aligned_cols=170 Identities=49% Similarity=0.718 Sum_probs=126.2
Q ss_pred CHHHHHHHhhcCccccCCCCcccCcceeeeEEEEEeeeccCCCCCCCCCCCCCccchhhhceeeeeecCCCccccccCCc
Q 003293 1 MAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSD 80 (833)
Q Consensus 1 ~~~~l~~G~~~R~~~~T~~N~~SSRSHaIfti~i~q~~~~~~~~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~kt~~~ 80 (833)
++.+|..|..+|++++|.||..|||||+||+|+|++...... ........|+|+|||||||||..+++++
T Consensus 243 ~~~ll~~G~~~R~~~~T~~N~~SSRSH~Ifti~v~~~~~~~~----------~~~~~~~~skL~lVDLAGSER~~~t~~~ 312 (443)
T 2owm_A 243 IIRWMRIGDGSRTVASTKMNDTSSRSHAVFTIMLKQIHHDLE----------TDDTTERSSRIRLVDLAGSERAKSTEAT 312 (443)
T ss_dssp HHHHHHHHHTTSCBCSSSSSCBCTTEEEEEEEEEEEEC-----------------CCEEEEEEEEEECCCCCC-------
T ss_pred HHHHHHHHHhhCCcccCcCCCccCCCeEEEEEEEEEeecccC----------CCCcceEEEEEEEEECCCCccccccCCc
Confidence 367899999999999999999999999999999998542100 0112345799999999999999999999
Q ss_pred ccccchhhhhhhhhhHHHHHHHHhccccCC-----------------CCCccccCCCcchhhhhcccCCCCcceeEEeec
Q 003293 81 GLRFKEGVHINRGLLALGNVISALGDDKKR-----------------KEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACI 143 (833)
Q Consensus 81 g~r~kE~~~IN~SL~aLg~vI~aL~~~~~~-----------------~~~~~iPyRdSkLTrLLqdsLgGns~t~mI~~V 143 (833)
|.+++|+.+||+||++||+||.+|++++.. ....||||||||||+||+|+|||||+|+|||||
T Consensus 313 g~rlkE~~~INkSL~aLg~vI~aL~~~~~~~~~~~~~~~~g~~~~~~~~~~hVPYRdSkLTrLLqdsLgGnskT~mIa~i 392 (443)
T 2owm_A 313 GQRLREGSNINKSLTTLGRVIAALADPKSSASRPSSPVKSGRGRTPGPANSVVPYRDSVLTWLLKDSLGGNSKTAMIACI 392 (443)
T ss_dssp -------CCSSHHHHHHHHHHHHHCC-------------------------CCCGGGSHHHHHSTTTTTSSCEEEEEEEE
T ss_pred cccccchhhhcHHHHHHHHHHHHHhcccccccccccccccccccccccCCCcccCcccHhHHHHHHhhCCCCcEEEEEEe
Confidence 999999999999999999999999986532 123599999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHhhcccccccccC-CcchHHHH
Q 003293 144 SPADINAEETLNTLKYANRARNIQNKPIVNR-DPMSTEML 182 (833)
Q Consensus 144 SP~~~~~~ETlsTL~fA~rar~I~n~p~vn~-d~~~~~i~ 182 (833)
||+ +|+||++||+||+||++|+|+|++|. |+..+..+
T Consensus 393 SP~--~~~ETlsTLrfA~rak~I~n~~~vN~~d~~~~~~~ 430 (443)
T 2owm_A 393 SPT--DYDETLSTLRYADQAKRIRTRAVVNQVDGVSAAER 430 (443)
T ss_dssp CSS--CHHHHHHHHHHHHHHTTCEECCCCCCC--------
T ss_pred ccc--cHHHHHHHHHHHHHHhhccccceecccCCccHHHH
Confidence 997 59999999999999999999999998 77665443
No 10
>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C*
Probab=100.00 E-value=3e-44 Score=398.43 Aligned_cols=165 Identities=50% Similarity=0.737 Sum_probs=128.0
Q ss_pred CHHHHHHHhhcCccccCCCCcccCcceeeeEEEEEeeeccCCCCCCCCCCCCCccchhhhceeeeeecCCCccccccCCc
Q 003293 1 MAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSD 80 (833)
Q Consensus 1 ~~~~l~~G~~~R~~~~T~~N~~SSRSHaIfti~i~q~~~~~~~~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~kt~~~ 80 (833)
+..+|..|..+|++++|.||..|||||+||+|+|.+...... ........|+|+|||||||||..+++++
T Consensus 192 ~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~----------~~~~~~~~skL~lVDLAGSEr~~~t~~~ 261 (366)
T 2zfi_A 192 IQDLMDSGNKPRTVAATNMNETSSRSHAVFNIIFTQKRHDAE----------TNITTEKVSKISLVDLAGSERADSTGAK 261 (366)
T ss_dssp HHHHHHHHHHHHTSGGGGTTTHHHHSEEEEEEEEEEEEECTT----------TTCEEEEEEEEEEEECCCGGGC------
T ss_pred HHHHHHHHhhccccccccCCCCCCcceEEEEEEEEEecccCC----------CCccceeEeEEEEEeCCCCccccccCCC
Confidence 367899999999999999999999999999999998653211 0012245699999999999999999999
Q ss_pred ccccchhhhhhhhhhHHHHHHHHhccccC-------CCCCccccCCCcchhhhhcccCCCCcceeEEeecCCCCCCHHHH
Q 003293 81 GLRFKEGVHINRGLLALGNVISALGDDKK-------RKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEET 153 (833)
Q Consensus 81 g~r~kE~~~IN~SL~aLg~vI~aL~~~~~-------~~~~~~iPyRdSkLTrLLqdsLgGns~t~mI~~VSP~~~~~~ET 153 (833)
|.+++|+.+||+||++||+||.+|+++.. .++..||||||||||+||+|+|||||+|+|||||||+..+++||
T Consensus 262 g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~~~~~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ET 341 (366)
T 2zfi_A 262 GTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINYDET 341 (366)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHC--------------CCGGGSHHHHHTGGGSSTTCEEEEEEEECCBGGGHHHH
T ss_pred ccchhhhhhHhHHHHHHHHHHHHHHhcccccccccccccCCcccccccHHHHHHHHHhCCCceEEEEEEeCCCcccHHHH
Confidence 99999999999999999999999987531 12457999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccccccccCC
Q 003293 154 LNTLKYANRARNIQNKPIVNRD 175 (833)
Q Consensus 154 lsTL~fA~rar~I~n~p~vn~d 175 (833)
++||+||+||++|+|+|+++..
T Consensus 342 lsTLrfA~rak~I~~~~~~~~~ 363 (366)
T 2zfi_A 342 LSTLRYADRAKQIRNTVSVNHH 363 (366)
T ss_dssp HHHHHHHHHTC-----------
T ss_pred HHHHHHHHHHhhccCCCCCCCC
Confidence 9999999999999999999853
No 11
>2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster}
Probab=100.00 E-value=1.4e-44 Score=401.75 Aligned_cols=160 Identities=52% Similarity=0.738 Sum_probs=127.0
Q ss_pred CHHHHHHHhhcCccccCCCCcccCcceeeeEEEEEeeeccCCCCCCCCCCCCCccchhhhceeeeeecCCCccccccCCc
Q 003293 1 MAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSD 80 (833)
Q Consensus 1 ~~~~l~~G~~~R~~~~T~~N~~SSRSHaIfti~i~q~~~~~~~~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~kt~~~ 80 (833)
++.+|..|..+|++++|.||..|||||+||+|+|++.... .+.......|+|+|||||||||..++++.
T Consensus 211 ~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~-----------~~~~~~~~~skL~lVDLAGSEr~~~t~~~ 279 (373)
T 2wbe_C 211 VYKLLEKGKERRKTATTLMNAQSSRSHTVFSIVVHIRENG-----------IEGEDMLKIGKLNLVDLAGSENVSKAGNE 279 (373)
T ss_dssp HHHHHHHHHHHHTTTCSCHHHHHHHSEEEEEEEEEECTTC-----------TTTCCEEEEEEEEEEECCCC---------
T ss_pred HHHHHHHHhhhhccccccCCCCCCCccEEEEEEEEEecCC-----------CCCCcceeEEEEEEEECCCCCccccccCc
Confidence 3678999999999999999999999999999999874321 01112346799999999999999999987
Q ss_pred -ccccchhhhhhhhhhHHHHHHHHhccccCCCCCccccCCCcchhhhhcccCCCCcceeEEeecCCCCCCHHHHHHHHHH
Q 003293 81 -GLRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKY 159 (833)
Q Consensus 81 -g~r~kE~~~IN~SL~aLg~vI~aL~~~~~~~~~~~iPyRdSkLTrLLqdsLgGns~t~mI~~VSP~~~~~~ETlsTL~f 159 (833)
|.+++|+.+||+||++||+||.+|+++. .||||||||||+||+|+|||||+|+|||||||+..+++||++||+|
T Consensus 280 ~g~rl~E~~~INkSL~aLg~vI~aL~~~~-----~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETlsTLrf 354 (373)
T 2wbe_C 280 KGIRVRETVNINQSLLTLGRVITALVDRA-----PHVPYRESKLTRLLQESLGGRTKTSIIATISPGHKDIEETLSTLEY 354 (373)
T ss_dssp -----------CHHHHHHHHHHHHHHHCS-----SCCCGGGCHHHHHTHHHHHSSSEEEEEEEECCBGGGHHHHHHHHHH
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHcCC-----CcCccccchHHHHHHHHhCCCceEEEEEEeCCCcccHHHHHHHHHH
Confidence 9999999999999999999999999864 4999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccccccccCCc
Q 003293 160 ANRARNIQNKPIVNRDP 176 (833)
Q Consensus 160 A~rar~I~n~p~vn~d~ 176 (833)
|+||+.|+|+|+||.+.
T Consensus 355 A~rak~I~n~p~vN~~~ 371 (373)
T 2wbe_C 355 AHRAKNIQNKPEVNQKL 371 (373)
T ss_dssp HHHHHTCEECCCCCEEC
T ss_pred HHHHhhccccceecccc
Confidence 99999999999999864
No 12
>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} SCOP: c.37.1.0
Probab=100.00 E-value=1.6e-43 Score=391.16 Aligned_cols=153 Identities=55% Similarity=0.847 Sum_probs=111.0
Q ss_pred CHHHHHHHhhcCccccCCCCcccCcceeeeEEEEEeeeccCCCCCCCCCCCCCccchhhhceeeeeecCCCccccccCCc
Q 003293 1 MAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSD 80 (833)
Q Consensus 1 ~~~~l~~G~~~R~~~~T~~N~~SSRSHaIfti~i~q~~~~~~~~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~kt~~~ 80 (833)
+..+|..|..+|++++|.||..|||||+||+|+|++...... .+..+..|+|+|||||||||..++++.
T Consensus 203 ~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~-----------~~~~~~~skl~lVDLAGSEr~~~t~~~ 271 (355)
T 3lre_A 203 ILHLLDNGNKNRTQHPTDMNATSSRSHAVFQIYLRQQDKTAS-----------INQNVRIAKMSLIDLAGSERASTSGAK 271 (355)
T ss_dssp HHHHHHHHHHTSCBC-----CBCTTCEEEEEEEEEEEETTSC-----------TTCCCCCEEEEEEECCCCCC-------
T ss_pred HHHHHHHHHhcCCcccccCcCCCCCCcEEEEEEEEEecCCCC-----------CCCCEEEEEEEEEECCCCCcCcCCCCc
Confidence 367899999999999999999999999999999998654211 122356799999999999999999999
Q ss_pred ccccchhhhhhhhhhHHHHHHHHhccccCCCCCccccCCCcchhhhhcccCCCCcceeEEeecCCCCCCHHHHHHHHHHH
Q 003293 81 GLRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYA 160 (833)
Q Consensus 81 g~r~kE~~~IN~SL~aLg~vI~aL~~~~~~~~~~~iPyRdSkLTrLLqdsLgGns~t~mI~~VSP~~~~~~ETlsTL~fA 160 (833)
|.+++|+.+||+||++||+||.+|+++++ +..||||||||||+||+|+|||||+|+|||||||+..+++||++||+||
T Consensus 272 g~rl~E~~~INkSL~aLg~vI~aL~~~~~--~~~hiPyRdSkLT~lL~dsLgGnskt~mIa~isP~~~~~~ETl~TL~fA 349 (355)
T 3lre_A 272 GTRFVEGTNINRSLLALGNVINALADSKR--KNQHIPYRNSKLTRLLKDSLGGNCQTIMIAAVSPSSVFYDDTYNTLKYA 349 (355)
T ss_dssp ----------CHHHHHHHHHHHHHC----------CCGGGSHHHHHTTTTSSTTSEEEEEEEECCBGGGHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCCcCCcccCHHHHHHHHhcCCCceEEEEEEeCCchhhHHHHHHHHHHH
Confidence 99999999999999999999999998753 3579999999999999999999999999999999999999999999999
Q ss_pred HHhhcc
Q 003293 161 NRARNI 166 (833)
Q Consensus 161 ~rar~I 166 (833)
+||++|
T Consensus 350 ~rak~I 355 (355)
T 3lre_A 350 NRAKDI 355 (355)
T ss_dssp HHTC--
T ss_pred HHhccC
Confidence 999986
No 13
>1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A*
Probab=100.00 E-value=2.9e-43 Score=387.90 Aligned_cols=153 Identities=41% Similarity=0.556 Sum_probs=127.6
Q ss_pred HHHHHHHhhcCccccCCCCcccCcceeeeEEEEEeeeccCCCCCCCCCCCCCccchhhhceeeeeecCCCccccccCCcc
Q 003293 2 AACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDG 81 (833)
Q Consensus 2 ~~~l~~G~~~R~~~~T~~N~~SSRSHaIfti~i~q~~~~~~~~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~kt~~~g 81 (833)
..+|..|..+|++++|.||..|||||+||+|+|.+.... ......|+|+|||||||||..++++.|
T Consensus 193 ~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~--------------~~~~~~skL~lVDLAGSEr~~~t~~~g 258 (347)
T 1f9v_A 193 EIILKKANKLRSTASTASNEHSSASHSIFIIHLSGSNAK--------------TGAHSYGTLNLVDLAGSERINVSQVVG 258 (347)
T ss_dssp HHHHHHHC-----------CCGGGSEEEEEEEEEEECC----------------CCEEEEEEEEEECCCCCCCCGGGCCH
T ss_pred HHHHHHHHhccceeeccCCCCCCCceEEEEEEEEEecCC--------------CCceeeeEEEEEECCCCccccccccch
Confidence 578999999999999999999999999999999885321 112456999999999999999999999
Q ss_pred cccchhhhhhhhhhHHHHHHHHhccccCCCCCccccCCCcchhhhhcccCCCCcceeEEeecCCCCCCHHHHHHHHHHHH
Q 003293 82 LRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYAN 161 (833)
Q Consensus 82 ~r~kE~~~IN~SL~aLg~vI~aL~~~~~~~~~~~iPyRdSkLTrLLqdsLgGns~t~mI~~VSP~~~~~~ETlsTL~fA~ 161 (833)
.+++|+.+||+||++||+||.+|+++.. ...||||||||||+||+|+|||||+|+|||||||+..+++||++||+||+
T Consensus 259 ~rl~E~~~IN~SL~aLg~vI~aL~~~~~--~~~hiPyRdSkLT~lLqdsLgGnskt~mI~~vsP~~~~~~ETl~TLrfA~ 336 (347)
T 1f9v_A 259 DRLRETQNINKSLSCLGDVIHALGQPDS--TKRHIPFRNSKLTYLLQYSLTGDSKTLMFVNISPSSSHINETLNSLRFAS 336 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCC-----CCCCGGGSHHHHHHHHHHSTTCEEEEEEEECCSGGGHHHHHHHHHHHH
T ss_pred hhhHHHHHHhHHHHHHHHHHHHHhcccC--CCCcCccccCHHHHHHHHHhCCCccEEEEEEeCCccccHHHHHHHHHHHH
Confidence 9999999999999999999999988653 24699999999999999999999999999999999999999999999999
Q ss_pred Hhhcccccc
Q 003293 162 RARNIQNKP 170 (833)
Q Consensus 162 rar~I~n~p 170 (833)
||++|++.|
T Consensus 337 r~~~i~~~~ 345 (347)
T 1f9v_A 337 KVNSTRLVS 345 (347)
T ss_dssp HHCCTTTC-
T ss_pred HHhhhccCC
Confidence 999999876
No 14
>3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii}
Probab=100.00 E-value=3.9e-43 Score=387.38 Aligned_cols=153 Identities=39% Similarity=0.538 Sum_probs=120.9
Q ss_pred HHHHHHHhhcCccccCCCCcccCcceeeeEEEEEeeeccCCCCCCCCCCCCCccchhhhceeeeeecCCCccccccCCcc
Q 003293 2 AACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDG 81 (833)
Q Consensus 2 ~~~l~~G~~~R~~~~T~~N~~SSRSHaIfti~i~q~~~~~~~~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~kt~~~g 81 (833)
..+|..|..+|++++|.||..|||||+||+|+|++..... .....|+|+|||||||||..+++++|
T Consensus 196 ~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~--------------~~~~~~kL~lVDLAGSEr~~~t~~~g 261 (349)
T 3t0q_A 196 DTILKKASKMRSTAATRSNERSSRSHSVFMVHINGRNLHT--------------GETSQGKLNLVDLAGSERINSSAVTG 261 (349)
T ss_dssp HHHHHHC------------CTGGGSEEEEEEEEEEEETTT--------------CCEEEEEEEEEECCCCCCCC----CC
T ss_pred HHHHHHHHHhCcccccccccccCCcceEEEEEEEEEecCC--------------CCeeEEEEEEEeCCCCCccccccCcc
Confidence 5789999999999999999999999999999999865321 12356899999999999999999999
Q ss_pred cccchhhhhhhhhhHHHHHHHHhccccCCCCCccccCCCcchhhhhcccCCCCcceeEEeecCCCCCCHHHHHHHHHHHH
Q 003293 82 LRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYAN 161 (833)
Q Consensus 82 ~r~kE~~~IN~SL~aLg~vI~aL~~~~~~~~~~~iPyRdSkLTrLLqdsLgGns~t~mI~~VSP~~~~~~ETlsTL~fA~ 161 (833)
.+++|+.+||+||++||+||.+|+++.. ...||||||||||+||||+|||||+|+|||||||+..+++||++||+||+
T Consensus 262 ~rl~E~~~INkSL~aLg~vI~aL~~~~~--~~~hiPyRdSkLT~lLqdsLgGnskt~mi~~vsP~~~~~~ETl~TL~fA~ 339 (349)
T 3t0q_A 262 ERLRETQNINKSLSCLGDVIYALNTPDA--GKRYIPFRNSKLTYLLQYSLVGDSKTLMFVNIPPDPNHISETLNSLRFAS 339 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTTG--GGSCCCGGGSHHHHHHGGGSSTTCEEEEEEEECCCGGGHHHHHHHHHHHH
T ss_pred ccchhHHhhhHhHHHHHHHHHHHhcccC--CCCcCCCcCCHHHHHHHHhcCCCceEEEEEEeCCchhhHHHHHHHHHHHH
Confidence 9999999999999999999999987653 23699999999999999999999999999999999999999999999999
Q ss_pred Hhhcccccc
Q 003293 162 RARNIQNKP 170 (833)
Q Consensus 162 rar~I~n~p 170 (833)
|++.|+..|
T Consensus 340 rv~~ik~~~ 348 (349)
T 3t0q_A 340 KVNSTKIAK 348 (349)
T ss_dssp HHHC-----
T ss_pred HhhhcccCC
Confidence 999998654
No 15
>1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9
Probab=100.00 E-value=6.7e-43 Score=386.26 Aligned_cols=152 Identities=41% Similarity=0.620 Sum_probs=131.4
Q ss_pred HHHHHHHhhcCccccCCCCcccCcceeeeEEEEEeeeccCCCCCCCCCCCCCccchhhhceeeeeecCCCccccccCCcc
Q 003293 2 AACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDG 81 (833)
Q Consensus 2 ~~~l~~G~~~R~~~~T~~N~~SSRSHaIfti~i~q~~~~~~~~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~kt~~~g 81 (833)
+.+|..|..+|++++|.||..|||||+||+|+|.+.. .....|+|+|||||||||..++++.|
T Consensus 188 ~~~l~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~-----------------~~~~~skL~lVDLAGSEr~~~t~~~~ 250 (360)
T 1ry6_A 188 ILKMIDGVLLRKIGVNSQNDESSRSHAILNIDLKDIN-----------------KNTSLGKIAFIDLAGSERGADTVSQN 250 (360)
T ss_dssp HHHHHHHHHHHHHCTTCCTTGGGGSEEEEEEEEEETT-----------------TTEEEEEEEEEECCCTTGGGGGGCSS
T ss_pred HHHHHHHhhhhhcccccccCCCccceEEEEEEEEecc-----------------CCcceeEEEEEECCCCcccccccccc
Confidence 5789999999999999999999999999999998732 11346899999999999999999876
Q ss_pred -cccchhhhhhhhhhHHHHHHHHhccccCCCCCccccCCCcchhhhhcccCCCCcceeEEeecCCCCCCHHHHHHHHHHH
Q 003293 82 -LRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYA 160 (833)
Q Consensus 82 -~r~kE~~~IN~SL~aLg~vI~aL~~~~~~~~~~~iPyRdSkLTrLLqdsLgGns~t~mI~~VSP~~~~~~ETlsTL~fA 160 (833)
.+++|+.+||+||++||+||.+|+.++ .||||||||||+||+|+|||||+|+|||||||+..+++||++||+||
T Consensus 251 ~~~~~E~~~INkSL~aLg~vI~aL~~~~-----~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETlsTLrfA 325 (360)
T 1ry6_A 251 KQTQTDGANINRSLLALKECIRAMDSDK-----NHIPFRDSELTKVLRDIFVGKSKSIMIANISPTISCCEQTLNTLRYS 325 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTST-----TSCCGGGCHHHHHTGGGGSSSCEEEEEEEECCBGGGHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHhcCC-----CCCccccCHHHHHHHHHhCCCCeEEEEEEeCCCcccHHHHHHHHHHH
Confidence 578999999999999999999997653 49999999999999999999999999999999999999999999999
Q ss_pred HHhhcccccccccCC
Q 003293 161 NRARNIQNKPIVNRD 175 (833)
Q Consensus 161 ~rar~I~n~p~vn~d 175 (833)
+||++|+|.|+.|..
T Consensus 326 ~rak~i~n~~~~~~~ 340 (360)
T 1ry6_A 326 SRVKNKGNSKLEGKP 340 (360)
T ss_dssp HHHCC----------
T ss_pred HHHhhcccCcccCCC
Confidence 999999997766643
No 16
>1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A*
Probab=100.00 E-value=5.8e-43 Score=382.35 Aligned_cols=146 Identities=50% Similarity=0.761 Sum_probs=136.2
Q ss_pred HHHHHHHhhcCccccCCCCcccCcceeeeEEEEEeeeccCCCCCCCCCCCCCccchhhhceeeeeecCCCccccccCCcc
Q 003293 2 AACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDG 81 (833)
Q Consensus 2 ~~~l~~G~~~R~~~~T~~N~~SSRSHaIfti~i~q~~~~~~~~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~kt~~~g 81 (833)
+++|..|..+|++++|.||..|||||+||+|+|.+.... ......|+|+|||||||||..++++.|
T Consensus 180 ~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~--------------~~~~~~skl~lVDLAGSEr~~~t~~~g 245 (325)
T 1bg2_A 180 MDTIDEGKSNRHVAVTNMNEHSSRSHSIFLINVKQENTQ--------------TEQKLSGKLYLVDLAGSEKVSKTGAEG 245 (325)
T ss_dssp HHHHHHHHHHTTTTCSCHHHHHHHSEEEEEEEEEEEETT--------------TCCEEEEEEEEEECCCSCCCCCCSSSC
T ss_pred HHHHHHHHhhCceeecCCCCCCCCCeEEEEEEEEEEecC--------------CCcEEEEEEEEEECCCCCcccccCCcc
Confidence 578999999999999999999999999999999986431 122457999999999999999999999
Q ss_pred cccchhhhhhhhhhHHHHHHHHhccccCCCCCccccCCCcchhhhhcccCCCCcceeEEeecCCCCCCHHHHHHHHHHHH
Q 003293 82 LRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYAN 161 (833)
Q Consensus 82 ~r~kE~~~IN~SL~aLg~vI~aL~~~~~~~~~~~iPyRdSkLTrLLqdsLgGns~t~mI~~VSP~~~~~~ETlsTL~fA~ 161 (833)
.+++|+.+||+||++||+||.+|+++. .||||||||||+||+|+|||||+|+|||||||+..+++||++||+||+
T Consensus 246 ~rl~E~~~IN~SL~aLg~vI~aL~~~~-----~hvPyRdSkLT~lLqdsLgGns~t~mia~vsP~~~~~~ETl~TL~fa~ 320 (325)
T 1bg2_A 246 AVLDEAKNINKSLSALGNVISALAEGS-----TYVPYRDSKMTRILQDSLGGNCRTTIVICCSPSSYNESETKSTLLFGQ 320 (325)
T ss_dssp TTSCCCCCCCHHHHHHHHHHHHHHTTC-----SCCCGGGSHHHHHGGGTSSSSCEEEEEEEECCBGGGHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHcCC-----CCCcccccHHHHHHHHHhCCCCcEEEEEEECCccccHHHHHHHHHHHH
Confidence 999999999999999999999999864 499999999999999999999999999999999999999999999999
Q ss_pred Hhhcc
Q 003293 162 RARNI 166 (833)
Q Consensus 162 rar~I 166 (833)
||++|
T Consensus 321 rak~I 325 (325)
T 1bg2_A 321 RAKTI 325 (325)
T ss_dssp TSCCC
T ss_pred HhccC
Confidence 99987
No 17
>4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} SCOP: c.37.1.0 PDB: 2xt3_A*
Probab=100.00 E-value=8.4e-43 Score=384.26 Aligned_cols=155 Identities=56% Similarity=0.869 Sum_probs=116.0
Q ss_pred HHHHHHHhhcCccccCCCCcccCcceeeeEEEEEeeeccCCCCCCCCCCCCCccchhhhceeeeeecCCCccccccCCcc
Q 003293 2 AACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDG 81 (833)
Q Consensus 2 ~~~l~~G~~~R~~~~T~~N~~SSRSHaIfti~i~q~~~~~~~~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~kt~~~g 81 (833)
+.+|..|..+|++++|.||..|||||+||+|+|++....... ...+....+..|+|+|||||||||..++++.|
T Consensus 190 ~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~~------~~~~~~~~~~~skl~lVDLAGSEr~~~t~~~g 263 (344)
T 4a14_A 190 LSLLEMGNAARHTGATHLNHLSSRSHTVFTVTLEQRGRAPSR------LPRPAPGQLLVSKFHFVDLAGSERVLKTGSTG 263 (344)
T ss_dssp HHHHHHHHHHHHC------CCGGGSEEEEEEEEEEEC------------------CEEEEEEEEEECCCCCCC-------
T ss_pred HHHHHhcchhcccCcchhhhcccccceEEEEEeeeCCCCccc------CCCccccceeeeeeeEEecccchhhcccCCch
Confidence 678999999999999999999999999999999986532110 01112234667999999999999999999999
Q ss_pred cccchhhhhhhhhhHHHHHHHHhccccCCCCCccccCCCcchhhhhcccCCCCcceeEEeecCCCCCCHHHHHHHHHHHH
Q 003293 82 LRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYAN 161 (833)
Q Consensus 82 ~r~kE~~~IN~SL~aLg~vI~aL~~~~~~~~~~~iPyRdSkLTrLLqdsLgGns~t~mI~~VSP~~~~~~ETlsTL~fA~ 161 (833)
.+++|+.+||+||++||+||.+|+++++ ...||||||||||+||+|+|||||+|+|||||||+..+++||++||+||+
T Consensus 264 ~rl~E~~~IN~SL~aLg~vI~aL~~~~~--~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~vsP~~~~~~ETl~TL~fA~ 341 (344)
T 4a14_A 264 ERLKESIQINSSLLALGNVISALGDPQR--RGSHIPYRDSKITRILKDSLGGNAKTVMIACVSPSSSDFDETLNTLNYAS 341 (344)
T ss_dssp -------CCCSHHHHHHHHHHHHTCTTT--TTSCCCGGGCHHHHHTTTSSSTTSEEEEEEEECCBGGGHHHHHHHHHHHH
T ss_pred hhhhhheeechhHHhhhhHHHhcCCccc--cCCCCCcchhhHHHHhHhhcCCCcceEEEEEeCCCccchhHHhhhhhhhh
Confidence 9999999999999999999999998653 45799999999999999999999999999999999999999999999999
Q ss_pred Hhh
Q 003293 162 RAR 164 (833)
Q Consensus 162 rar 164 (833)
|||
T Consensus 342 rAk 344 (344)
T 4a14_A 342 RAQ 344 (344)
T ss_dssp HTC
T ss_pred hcC
Confidence 996
No 18
>2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.7e-42 Score=379.36 Aligned_cols=147 Identities=47% Similarity=0.708 Sum_probs=128.5
Q ss_pred HHHHHHHhhcCccccCCCCcccCcceeeeEEEEEeeeccCCCCCCCCCCCCCccchhhhceeeeeecCCCccccccCCcc
Q 003293 2 AACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDG 81 (833)
Q Consensus 2 ~~~l~~G~~~R~~~~T~~N~~SSRSHaIfti~i~q~~~~~~~~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~kt~~~g 81 (833)
..+|..|..+|++++|.||..|||||+||+|+|++.... ......|+|+|||||||||..++++.|
T Consensus 183 ~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~--------------~~~~~~skL~lVDLAGSEr~~~t~~~g 248 (330)
T 2h58_A 183 NKVFEFGHTNRTTEFTNLNEHSSRSHALLIVTVRGVDCS--------------TGLRTTGKLNLVDLAGSERVGKSGAEG 248 (330)
T ss_dssp HHHHHHHHHHTTCTTCCSCSCGGGSEEEEEEEEEEEETT--------------TTEEEEEEEEEEECCCCCCCC------
T ss_pred HHHHHHHHhhCCcccccCCCCcCCccEEEEEEEEEEecC--------------CCcEEEEEEEEEeCCCCCcccccCCch
Confidence 578999999999999999999999999999999985431 122457999999999999999999999
Q ss_pred cccchhhhhhhhhhHHHHHHHHhccccCCCCCccccCCCcchhhhhcccCCCCcceeEEeecCCCCCCHHHHHHHHHHHH
Q 003293 82 LRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYAN 161 (833)
Q Consensus 82 ~r~kE~~~IN~SL~aLg~vI~aL~~~~~~~~~~~iPyRdSkLTrLLqdsLgGns~t~mI~~VSP~~~~~~ETlsTL~fA~ 161 (833)
.+++|+.+||+||++||+||.+|+++. .||||||||||+||+|+|||||+|+|||||||+..+++||++||+||+
T Consensus 249 ~r~~E~~~IN~SL~aLg~vI~aL~~~~-----~hvPyRdSkLT~lL~dsLgGns~t~mI~~isP~~~~~~ETl~TL~fA~ 323 (330)
T 2h58_A 249 SRLREAQHINKSLSALGDVIAALRSRQ-----GHVPFRNSKLTYLLQDSLSGDSKTLMVVQVSPVEKNTSETLYSLKFAE 323 (330)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTC-----SCCCGGGSHHHHHTHHHHSTTCEEEEEEEECCBGGGHHHHHHHHHHHH
T ss_pred hhhHHHHHhhHhHHHHHHHHHHHhcCC-----CCCcccccHHHHHHHHHhCCCceEEEEEEeCCccccHHHHHHHHHHHH
Confidence 999999999999999999999998754 499999999999999999999999999999999999999999999999
Q ss_pred Hhhccc
Q 003293 162 RARNIQ 167 (833)
Q Consensus 162 rar~I~ 167 (833)
||++|+
T Consensus 324 rak~i~ 329 (330)
T 2h58_A 324 RVRSVE 329 (330)
T ss_dssp HHC---
T ss_pred HHhhCc
Confidence 999986
No 19
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-42 Score=388.91 Aligned_cols=153 Identities=42% Similarity=0.574 Sum_probs=131.6
Q ss_pred HHHHHHHhhcCccccCCCCcccCcceeeeEEEEEeeeccCCCCCCCCCCCCCccchhhhceeeeeecCCCccccccCCcc
Q 003293 2 AACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDG 81 (833)
Q Consensus 2 ~~~l~~G~~~R~~~~T~~N~~SSRSHaIfti~i~q~~~~~~~~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~kt~~~g 81 (833)
..+|..|..+|++++|.||..|||||+||+|+|.+..... .....|+|+|||||||||..++++.|
T Consensus 249 ~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~--------------~~~~~~kL~lVDLAGSEr~~~t~~~g 314 (403)
T 4etp_A 249 EIILKKANKLRSTASTASNEHSSRSHSIFIIHLSGSNAKT--------------GAHSYGTLNLVDLAGSERINVSQVVG 314 (403)
T ss_dssp HHHHHHHC--C----CHHHHHHHTSEEEEEEEEEEEETTT--------------CCEEEEEEEEEECCCCCCCCCSSCCH
T ss_pred HHHHHHHHHhcccccccCCcccCCcccEEEEEEEEeecCC--------------CCeeEEEEEEEECCCCccccccCChh
Confidence 5789999999999999999999999999999999864321 12356899999999999999999999
Q ss_pred cccchhhhhhhhhhHHHHHHHHhccccCCCCCccccCCCcchhhhhcccCCCCcceeEEeecCCCCCCHHHHHHHHHHHH
Q 003293 82 LRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYAN 161 (833)
Q Consensus 82 ~r~kE~~~IN~SL~aLg~vI~aL~~~~~~~~~~~iPyRdSkLTrLLqdsLgGns~t~mI~~VSP~~~~~~ETlsTL~fA~ 161 (833)
.+++|+.+||+||++||+||.+|+++.. ...||||||||||+||+|+|||||+|+|||||||+..+++||++||+||+
T Consensus 315 ~rl~E~~~INkSL~aLg~vI~aL~~~~~--~~~hiPyRdSkLT~LLqdsLgGnskt~mi~~vsP~~~~~~ETl~TL~fA~ 392 (403)
T 4etp_A 315 DRLRETQNINKSLSALGDVIHALGQPDS--TKRHIPFRNSKLTYLLQYSLTGDSKTLMFVNISPSSSHINETLNSLRFAS 392 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSSCT--TTSCCCGGGSHHHHHTGGGTSTTCEEEEEEEECCSGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccC--CCCcCCcccchHHHHHHHhcCCCceEEEEEEeCCchhhHHHHHHHHHHHH
Confidence 9999999999999999999999987653 34699999999999999999999999999999999999999999999999
Q ss_pred Hhhcccccc
Q 003293 162 RARNIQNKP 170 (833)
Q Consensus 162 rar~I~n~p 170 (833)
|++.|+..|
T Consensus 393 rv~~~~~~~ 401 (403)
T 4etp_A 393 KVNSTRLVS 401 (403)
T ss_dssp HHCCC----
T ss_pred HHhhcccCC
Confidence 999998876
No 20
>3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} SCOP: c.37.1.9
Probab=100.00 E-value=3.1e-42 Score=380.69 Aligned_cols=154 Identities=53% Similarity=0.722 Sum_probs=119.4
Q ss_pred HHHHHHHhhcCccccCCCCcccCcceeeeEEEEEeeeccCCCCCCCCCCCCCccchhhhceeeeeecCCCccccccCCcc
Q 003293 2 AACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDG 81 (833)
Q Consensus 2 ~~~l~~G~~~R~~~~T~~N~~SSRSHaIfti~i~q~~~~~~~~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~kt~~~g 81 (833)
..+|..|..+|++++|.||..|||||+||+|+|.+..... .........|+|+|||||||||..++++.|
T Consensus 195 ~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~----------~~~~~~~~~skL~lVDLAGSEr~~~t~~~g 264 (354)
T 3gbj_A 195 ESLMSEGNKSRTVAATNMNEESSRSHAVFKITLTHTLYDV----------KSGTSGEKVGKLSLVDLAGSERATKTGAAG 264 (354)
T ss_dssp HHHHHHHHHCC----------CTTSEEEEEEEEEEEEECT----------TSCEEEEEEEEEEEEECCCCCCCCCCC---
T ss_pred HHHHHHHHhcCCeeecCCCCCCCcccEEEEEEEEEEeccc----------CCCCCCeeEEEEEEEECCCCCchhhcCCcc
Confidence 5789999999999999999999999999999998853211 011223467999999999999999999999
Q ss_pred cccchhhhhhhhhhHHHHHHHHhccccCC-CCCccccCCCcchhhhhcccCCCCcceeEEeecCCCCCCHHHHHHHHHHH
Q 003293 82 LRFKEGVHINRGLLALGNVISALGDDKKR-KEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYA 160 (833)
Q Consensus 82 ~r~kE~~~IN~SL~aLg~vI~aL~~~~~~-~~~~~iPyRdSkLTrLLqdsLgGns~t~mI~~VSP~~~~~~ETlsTL~fA 160 (833)
.+++|+.+||+||++||+||.+|++.... ++..||||||||||+||+|+|||||+|+|||||||+..+++||++||+||
T Consensus 265 ~rl~E~~~IN~SL~aLg~vI~aL~~~~~~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~vsP~~~~~~ETlsTLr~a 344 (354)
T 3gbj_A 265 DRLKEGSNINKSLTTLGLVISALADQSAGKNKNKFVPYRDSVLTWLLKDSLGGNSKTAMVATVSPAADNYDETLSTLRYA 344 (354)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHC------CCCCCGGGSHHHHHTHHHHSTTCEEEEEEEECCBGGGHHHHHHHHHHH
T ss_pred ccchhHHHhhHHHHHHHHHHHHHHhhhcccCCCCcccccccHHHHHHHHHhCCCCeEEEEEEeCCCcchHHHHHHHHHHH
Confidence 99999999999999999999999975421 24579999999999999999999999999999999999999999999999
Q ss_pred HHhhc
Q 003293 161 NRARN 165 (833)
Q Consensus 161 ~rar~ 165 (833)
.+|+.
T Consensus 345 ~~~~~ 349 (354)
T 3gbj_A 345 DRAKH 349 (354)
T ss_dssp HHHC-
T ss_pred HHhhh
Confidence 99985
No 21
>3nwn_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens}
Probab=100.00 E-value=8e-43 Score=385.53 Aligned_cols=149 Identities=44% Similarity=0.660 Sum_probs=116.4
Q ss_pred HHHHHHHhhcCccccCCCCcccCcceeeeEEEEEeeeccCCCCCCCCCCCCCccchhhhceeeeeecCCCccccccCCcc
Q 003293 2 AACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDG 81 (833)
Q Consensus 2 ~~~l~~G~~~R~~~~T~~N~~SSRSHaIfti~i~q~~~~~~~~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~kt~~~g 81 (833)
..+|..|..+|++++|.||..|||||+||+|+|++..... .+.....|+|+|||||||||..++++.|
T Consensus 211 ~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~i~~~~~~~------------~~~~~~~skL~lVDLAGSEr~~~t~~~g 278 (359)
T 3nwn_A 211 FSLLFEGETNRIIASHTMNKNSSRSHCIFTIYLEAHSRTL------------SEEKYITSKINLVDLAGSERLGKSGSEG 278 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCEEEEEEEEEEC-------------------CCEEEEEEEEECCCCC---------
T ss_pred HHHHHhhhhhcccccccCccccCcceEEEEEEEEeecccc------------cCcccccccceeeeccccccccccCCch
Confidence 5789999999999999999999999999999998754311 1223567999999999999999999999
Q ss_pred cccchhhhhhhhhhHHHHHHHHhccccCCCCCccccCCCcchhhhhcccCCCCcceeEEeecCCCCCCHHHHHHHHHHHH
Q 003293 82 LRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYAN 161 (833)
Q Consensus 82 ~r~kE~~~IN~SL~aLg~vI~aL~~~~~~~~~~~iPyRdSkLTrLLqdsLgGns~t~mI~~VSP~~~~~~ETlsTL~fA~ 161 (833)
.+++|+.+||+||++||+||.+|++++. .||||||||||+||||+|||||+|+|||||||+..+++||++||+||+
T Consensus 279 ~rl~E~~~IN~SL~~Lg~vI~aL~~~~~----~hVPYRdSkLT~lLqdsLgGnskt~mI~~isP~~~~~~ETlsTL~fA~ 354 (359)
T 3nwn_A 279 QVLKEATYINKSLSFLEQAIIALGDQKR----DHIPFRQCKLTHALKDSLGGNCNMVLVTNIYGEAAQLEETLSSLRFAS 354 (359)
T ss_dssp -------CCSTHHHHHHHHHHHHHC---------CCGGGSHHHHHTHHHHSSSSEEEEEEEECCSGGGHHHHHHHHHHHT
T ss_pred hHHHhhhhhcccHHHHHHHHHHHHhcCC----CcCCcccCHHHHHHHHhcCCCccEEEEEEeCCchhhHHHHHHHHHHHH
Confidence 9999999999999999999999997643 599999999999999999999999999999999999999999999999
Q ss_pred Hhhcc
Q 003293 162 RARNI 166 (833)
Q Consensus 162 rar~I 166 (833)
|||.|
T Consensus 355 rak~I 359 (359)
T 3nwn_A 355 RMKLV 359 (359)
T ss_dssp TGGGC
T ss_pred HHcCC
Confidence 99987
No 22
>2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.9e-42 Score=381.92 Aligned_cols=147 Identities=41% Similarity=0.571 Sum_probs=109.4
Q ss_pred CHHHHHHHhhcCccccCCCCcccCcceeeeEEEEEeeeccCCCCCCCCCCCCCccchhhhceeeeeecCCCccccccCCc
Q 003293 1 MAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSD 80 (833)
Q Consensus 1 ~~~~l~~G~~~R~~~~T~~N~~SSRSHaIfti~i~q~~~~~~~~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~kt~~~ 80 (833)
+..+|..|..+|++++|.||..|||||+||+|+|++.... ......|+|+|||||||||.+++++.
T Consensus 226 ~~~ll~~g~~~R~~~~T~~N~~SSRSH~Ifti~v~~~~~~--------------~~~~~~skL~lVDLAGSEr~~~t~~~ 291 (376)
T 2rep_A 226 VDALLHLARQNRAVARTAQNERSSRSHSVFQLQISGEHSS--------------RGLQCGAPLSLVDLAGSERLDPGLAL 291 (376)
T ss_dssp HHHHHHHHHHHHHHCC-----CGGGSEEEEEEEEEEEESS--------------SCCEEEEEEEEEECCCCC--------
T ss_pred HHHHHHHHHhhcccccccCCCCCCCceEEEEEEEEEEecC--------------CCcEEEeEEEEEECCCCccccccccc
Confidence 3678999999999999999999999999999999985431 11235689999999999999999999
Q ss_pred c----cccchhhhhhhhhhHHHHHHHHhccccCCCCCccccCCCcchhhhhcccCCCCcceeEEeecCCCCCCHHHHHHH
Q 003293 81 G----LRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNT 156 (833)
Q Consensus 81 g----~r~kE~~~IN~SL~aLg~vI~aL~~~~~~~~~~~iPyRdSkLTrLLqdsLgGns~t~mI~~VSP~~~~~~ETlsT 156 (833)
| .+++|+.+||+||++||+||.+|+++. .||||||||||+||||+|||||+|+|||||||+..+++||++|
T Consensus 292 g~~~~~rlkE~~~INkSL~aLg~vI~aL~~~~-----~hVPYRdSkLT~LLqdsLgGnskT~mIa~isP~~~~~~ETlsT 366 (376)
T 2rep_A 292 GPGERERLRETQAINSSLSTLGLVIMALSNKE-----SHVPYRNSKLTYLLQNSLGGSAKMLMFVNISPLEENVSESLNS 366 (376)
T ss_dssp ----------------CHHHHHHHHHHHHTTC-----SCCCGGGSHHHHHTGGGTSTTCEEEEEEEECCCGGGHHHHHHH
T ss_pred CccccchhhHHhHhhHHHHHHHHHHHHHhcCC-----CccCCcCCHHHHHHHHhhCCCCeEEEEEEeCCchhhHHHHHHH
Confidence 9 999999999999999999999998754 4999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcc
Q 003293 157 LKYANRARNI 166 (833)
Q Consensus 157 L~fA~rar~I 166 (833)
|+||+|++.+
T Consensus 367 LrfA~Rv~~~ 376 (376)
T 2rep_A 367 LRFASKVNQC 376 (376)
T ss_dssp HHHHHHHC--
T ss_pred HHHHHHHhcC
Confidence 9999999863
No 23
>3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A*
Probab=100.00 E-value=4e-42 Score=377.98 Aligned_cols=144 Identities=42% Similarity=0.634 Sum_probs=112.4
Q ss_pred HHHHHHHhhcCccccCCCCcccCcceeeeEEEEEeeeccCCCCCCCCCCCCCccchhhhceeeeeecCCCccccccCCcc
Q 003293 2 AACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDG 81 (833)
Q Consensus 2 ~~~l~~G~~~R~~~~T~~N~~SSRSHaIfti~i~q~~~~~~~~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~kt~~~g 81 (833)
..+|..|..+|++++|.||..|||||+||+|+|.+. ...|+|+|||||||||..++++.|
T Consensus 196 ~~ll~~g~~~R~~~~T~~N~~SSRSH~Ifti~v~~~--------------------~~~skl~lVDLAGSEr~~~t~~~g 255 (344)
T 3dc4_A 196 HHILELGTRNRRVRPTNMNSNSSRSHAIVTIHVKSK--------------------THHSRMNIVDLAGSEGVRRTGHEG 255 (344)
T ss_dssp HHHHHHHHHTCC----------CCEEEEEEEEEECS--------------------SCEEEEEEEECCCCCCC-------
T ss_pred HHHHHHHHhhcccccccCCCCCCCceEEEEEEEEec--------------------CcEEEEEEEECCCCcccccccccc
Confidence 578999999999999999999999999999999751 135899999999999999999999
Q ss_pred cccchhhhhhhhhhHHHHHHHHhccccCCCCCccccCCCcchhhhhcccCCCCcceeEEeecCCCCCCHHHHHHHHHHHH
Q 003293 82 LRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYAN 161 (833)
Q Consensus 82 ~r~kE~~~IN~SL~aLg~vI~aL~~~~~~~~~~~iPyRdSkLTrLLqdsLgGns~t~mI~~VSP~~~~~~ETlsTL~fA~ 161 (833)
.+++|+.+||+||++||+||.+|++++ .||||||||||+||+|+|||||+|+|||||||+..+++||++||+||+
T Consensus 256 ~r~~E~~~INkSL~aLg~vI~aL~~~~-----~hiPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETlsTL~fA~ 330 (344)
T 3dc4_A 256 VARQEGVNINLGLLSINKVVMSMAAGH-----TVIPYRDSVLTTVLQASLTAQSYLTFLACISPHQCDLSETLSTLRFGT 330 (344)
T ss_dssp ------CCSCCHHHHHHHHHHHHHTTC-----SSCCGGGSHHHHHTTTTSSTTCEEEEEEEECCCGGGHHHHHHHHHHHH
T ss_pred chhHHHHHHhHhHHHHHHHHHHHhccC-----CcCCccccHHHHHHHHHhCCCCEEEEEEEeCCchhhHHHHHHHHHHHH
Confidence 999999999999999999999999764 499999999999999999999999999999999999999999999999
Q ss_pred Hhhcccccc
Q 003293 162 RARNIQNKP 170 (833)
Q Consensus 162 rar~I~n~p 170 (833)
||+.....|
T Consensus 331 ra~~~~~~~ 339 (344)
T 3dc4_A 331 SAKAAALEH 339 (344)
T ss_dssp HHHHHTTTC
T ss_pred HHhhcCCCC
Confidence 999886554
No 24
>2nr8_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural genomics consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens} PDB: 3nwn_A*
Probab=100.00 E-value=1.4e-42 Score=383.53 Aligned_cols=149 Identities=44% Similarity=0.660 Sum_probs=116.3
Q ss_pred HHHHHHHhhcCccccCCCCcccCcceeeeEEEEEeeeccCCCCCCCCCCCCCccchhhhceeeeeecCCCccccccCCcc
Q 003293 2 AACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDG 81 (833)
Q Consensus 2 ~~~l~~G~~~R~~~~T~~N~~SSRSHaIfti~i~q~~~~~~~~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~kt~~~g 81 (833)
+.+|..|..+|++++|.||..|||||+||+|+|++..... .+..+..|+|+|||||||||.+++++.|
T Consensus 210 ~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~------------~~~~~~~skL~lVDLAGSEr~~~t~~~g 277 (358)
T 2nr8_A 210 FSLLFEGETNRIIASHTMNKNSSRSHCIFTIYLEAHSRTL------------SEEKYITSKINLVDLAGSERLGKSGSEG 277 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCEEEEEEEEEEC-------------------CCEEEEEEEEECCCCC---------
T ss_pred HHHHHHHHhccccccccCCCCCCcCeEEEEEEEEEEeccC------------CCCCEEEEEEEEEECCCCCcccccCCch
Confidence 5789999999999999999999999999999999854211 1223467999999999999999999999
Q ss_pred cccchhhhhhhhhhHHHHHHHHhccccCCCCCccccCCCcchhhhhcccCCCCcceeEEeecCCCCCCHHHHHHHHHHHH
Q 003293 82 LRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYAN 161 (833)
Q Consensus 82 ~r~kE~~~IN~SL~aLg~vI~aL~~~~~~~~~~~iPyRdSkLTrLLqdsLgGns~t~mI~~VSP~~~~~~ETlsTL~fA~ 161 (833)
.+++|+.+||+||++||+||.+|+++++ .||||||||||+||||+|||||+|+|||||||+..+++||++||+||+
T Consensus 278 ~rl~E~~~INkSL~aLg~vI~aL~~~~~----~hiPyRdSkLT~LLqdsLgGnskt~mIa~isP~~~~~~ETlsTLrfA~ 353 (358)
T 2nr8_A 278 QVLKEATYINKSLSFLEQAIIALGDQKR----DHIPFRQCKLTHALKDSLGGNCNMVLVTNIYGEAAQLEETLSSLRFAS 353 (358)
T ss_dssp -------CCSTHHHHHHHHHHHHHC---------CCGGGSHHHHHTHHHHSSSSEEEEEEEECCSGGGHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhCCC----CcCCCccCHHHHHHHHhcCCCCeEEEEEEeCCchhhHHHHHHHHHHHH
Confidence 9999999999999999999999987643 599999999999999999999999999999999999999999999999
Q ss_pred Hhhcc
Q 003293 162 RARNI 166 (833)
Q Consensus 162 rar~I 166 (833)
||+.|
T Consensus 354 Rak~I 358 (358)
T 2nr8_A 354 RMKLV 358 (358)
T ss_dssp TGGGC
T ss_pred HhccC
Confidence 99986
No 25
>1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A*
Probab=100.00 E-value=2.8e-41 Score=377.46 Aligned_cols=146 Identities=48% Similarity=0.683 Sum_probs=111.1
Q ss_pred CHHHHHHHhhcCccccCCCCcccCcceeeeEEEEEeeeccCCCCCCCCCCCCCccchhhhceeeeeecCCCccccccC-C
Q 003293 1 MAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTG-S 79 (833)
Q Consensus 1 ~~~~l~~G~~~R~~~~T~~N~~SSRSHaIfti~i~q~~~~~~~~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~kt~-~ 79 (833)
++.+|..|..+|++++|.||..|||||+||+|+|.+.. ...|+|+|||||||||..+++ +
T Consensus 259 ~~~ll~~G~~~R~~~~T~~N~~SSRSH~Ifti~v~~~~-------------------~~~skL~lVDLAGSER~~~t~~~ 319 (410)
T 1v8k_A 259 VIKMINMGSACRTSGQTFANSNSSRSHACFQILLRTKG-------------------RLHGKFSLVDLAGNERGADTSSA 319 (410)
T ss_dssp HHHHHHHHHHTCC--------CCCSSEEEEEEEEESSS-------------------SEEEEEEEEECCCCCC-------
T ss_pred HHHHHHHHHhhCCcccccCCCCCCCceEEEEEEEEeCC-------------------cceeEEEEEECCCcccccccccc
Confidence 36789999999999999999999999999999998621 246899999999999998886 5
Q ss_pred cccccchhhhhhhhhhHHHHHHHHhccccCCCCCccccCCCcchhhhhccc-CCCCcceeEEeecCCCCCCHHHHHHHHH
Q 003293 80 DGLRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDS-LGGNSRTVMIACISPADINAEETLNTLK 158 (833)
Q Consensus 80 ~g~r~kE~~~IN~SL~aLg~vI~aL~~~~~~~~~~~iPyRdSkLTrLLqds-LgGns~t~mI~~VSP~~~~~~ETlsTL~ 158 (833)
+|.+++|+.+||+||++||+||.+|+.+. .||||||||||+||+|| |||||+|+|||||||+..+++||++||+
T Consensus 320 ~~~~~~E~~~INkSL~aLg~vI~aL~~~~-----~hIPYRdSKLTrLLqdsllGgnskT~mIa~iSP~~~~~~ETlsTLr 394 (410)
T 1v8k_A 320 DRQTRMEGAEINKSLLALKECIRALGQNK-----AHTPFRESKLTQVLRDSFIGENSRTCMIAMISPGISSCEYTLNTLR 394 (410)
T ss_dssp -----TTHHHHHHHHHHHHHHHHHHTC-----------CCCCHHHHHTTHHHHSSSEEEEEEEEECCBGGGHHHHHHHHH
T ss_pred ccchhHHHHHHhHHHHHHHHHHHHHhcCC-----CCCCcccchhHHHHhhcccCCCceEEEEEEeCCccccHHHHHHHHH
Confidence 77899999999999999999999998653 59999999999999999 5999999999999999999999999999
Q ss_pred HHHHhhcccccc
Q 003293 159 YANRARNIQNKP 170 (833)
Q Consensus 159 fA~rar~I~n~p 170 (833)
||+||+.|..+|
T Consensus 395 fA~rak~i~~~~ 406 (410)
T 1v8k_A 395 YADRVKELSHHH 406 (410)
T ss_dssp HHHHHHTTC---
T ss_pred HHHHhccCCCCC
Confidence 999999998776
No 26
>2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D*
Probab=100.00 E-value=3.6e-41 Score=374.43 Aligned_cols=145 Identities=48% Similarity=0.689 Sum_probs=109.8
Q ss_pred CHHHHHHHhhcCccccCCCCcccCcceeeeEEEEEeeeccCCCCCCCCCCCCCccchhhhceeeeeecCCCccccccC-C
Q 003293 1 MAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTG-S 79 (833)
Q Consensus 1 ~~~~l~~G~~~R~~~~T~~N~~SSRSHaIfti~i~q~~~~~~~~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~kt~-~ 79 (833)
++.+|..|..+|++++|.||..|||||+||+|+|++.. ...|+|+|||||||||..+++ +
T Consensus 239 ~~~ll~~G~~~R~~~~T~~N~~SSRSH~Ifti~v~~~~-------------------~~~skL~lVDLAGSER~~~t~~~ 299 (387)
T 2heh_A 239 VIKMIDMGSACRTSGQTFANSNSSRSHACFQIILRAKG-------------------RMHGKFSLVDLAGNERGADTSSA 299 (387)
T ss_dssp HHHHHHHHHHHC---------CGGGSEEEEEEEEESSS-------------------SEEEEEEEEECCCCC--------
T ss_pred HHHHHHHHHhhCCcccCcCcCCcccceEEEEEEEEECC-------------------eeeeEEEEEECCCCccccccccc
Confidence 36789999999999999999999999999999998621 246899999999999998886 5
Q ss_pred cccccchhhhhhhhhhHHHHHHHHhccccCCCCCccccCCCcchhhhhccc-CCCCcceeEEeecCCCCCCHHHHHHHHH
Q 003293 80 DGLRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDS-LGGNSRTVMIACISPADINAEETLNTLK 158 (833)
Q Consensus 80 ~g~r~kE~~~IN~SL~aLg~vI~aL~~~~~~~~~~~iPyRdSkLTrLLqds-LgGns~t~mI~~VSP~~~~~~ETlsTL~ 158 (833)
+|.+++|+.+||+||++||+||.+|+++. .||||||||||+||||+ |||||+|+|||||||+..+++||++||+
T Consensus 300 ~~~~~~E~~~INkSL~aLg~vI~aL~~~~-----~hvPYRdSKLTrlLqdsllGgnskT~mIa~isP~~~~~~ETlsTLr 374 (387)
T 2heh_A 300 DRQTRMEGAEINKSLLALKECIRALGQNK-----AHTPFRESKLTQVLRDSFIGENSRTCMIATISPGISSCEYTLNTLR 374 (387)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHTTC-----SCCCGGGSHHHHHTGGGGSSTTEEEEEEEEECCBGGGHHHHHHHHH
T ss_pred cccchhhHHHHhHHHHHHHHHHHHHhcCC-----CCCCccccHHHHHHhhhccCCCCeEEEEEEeCCccchHHHHHHHHH
Confidence 77899999999999999999999998753 59999999999999999 5999999999999999999999999999
Q ss_pred HHHHhhccccc
Q 003293 159 YANRARNIQNK 169 (833)
Q Consensus 159 fA~rar~I~n~ 169 (833)
||+||++|++.
T Consensus 375 fA~rak~I~~~ 385 (387)
T 2heh_A 375 YADRVKELSPH 385 (387)
T ss_dssp HHHHHCC----
T ss_pred HHHHhccCcCC
Confidence 99999999864
No 27
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=100.00 E-value=2.2e-40 Score=371.79 Aligned_cols=146 Identities=40% Similarity=0.531 Sum_probs=118.8
Q ss_pred HHHHHHHhhcCccccCCCCcccCcceeeeEEEEEeeeccCCCCCCCCCCCCCccchhhhceeeeeecCCCccccccCCcc
Q 003293 2 AACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDG 81 (833)
Q Consensus 2 ~~~l~~G~~~R~~~~T~~N~~SSRSHaIfti~i~q~~~~~~~~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~kt~~~g 81 (833)
..+|..|..+|++++|.||..|||||+||+|+|.+.... ......|+|+|||||||||.. .|
T Consensus 241 ~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~--------------~~~~~~~kL~lVDLAGSEr~~----~~ 302 (412)
T 3u06_A 241 RHLMHTAKMNRATASTAGNERSSRSHAVTKLELIGRHAE--------------KQEISVGSINLVDLAGSESPK----TS 302 (412)
T ss_dssp HHHHHHHHHHCC-----CHHHHTTCEEEEEEEEEEEETT--------------TTEEEEEEEEEEECCCCCC--------
T ss_pred HHHHHHHHhcccccccCCCCCCcCceEEEEEEEEEEeCC--------------CCCEEEEEEEEEECCCCCcCC----cc
Confidence 578999999999999999999999999999999986431 122456899999999999974 46
Q ss_pred cccchhhhhhhhhhHHHHHHHHhccccCCCCCccccCCCcchhhhhcccCCCCcceeEEeecCCCCCCHHHHHHHHHHHH
Q 003293 82 LRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYAN 161 (833)
Q Consensus 82 ~r~kE~~~IN~SL~aLg~vI~aL~~~~~~~~~~~iPyRdSkLTrLLqdsLgGns~t~mI~~VSP~~~~~~ETlsTL~fA~ 161 (833)
.+++|+.+||+||++||+||.+|+++. .||||||||||+||+|+|||||+|+|||||||+..+++||++||+||+
T Consensus 303 ~rl~E~~~INkSL~aLg~vI~aL~~~~-----~hiPyRdSkLT~LLqdsLgGnskt~mI~~vsP~~~~~~ETl~TLrfA~ 377 (412)
T 3u06_A 303 TRMTETKNINRSLSELTNVILALLQKQ-----DHIPYRNSKLTHLLMPSLGGNSKTLMFINVSPFQDCFQESVKSLRFAA 377 (412)
T ss_dssp ------CTTTHHHHHHHHHHHHHHTTC-----SCCCGGGSHHHHHHGGGTSTTCEEEEEEEECCBGGGHHHHHHHHHHHH
T ss_pred chhHhHHHHhHHHHHHHHHHHHHhccC-----CCCCccccHHHHHHHHhcCCCceEEEEEEeCCChhhHHHHHHHHHHHH
Confidence 899999999999999999999998754 499999999999999999999999999999999999999999999999
Q ss_pred Hhhcccccc
Q 003293 162 RARNIQNKP 170 (833)
Q Consensus 162 rar~I~n~p 170 (833)
|++.|+..+
T Consensus 378 rv~~i~~~~ 386 (412)
T 3u06_A 378 SVNSCKMTK 386 (412)
T ss_dssp HHHHHCC--
T ss_pred HHhhccccc
Confidence 999998654
No 28
>4h1g_A Maltose binding protein-cakar3 motor domain fusio; kinesin motor domain, motor protein, chimera; HET: MTT ADP EDO; 2.15A {Escherichia coli}
Probab=100.00 E-value=3.7e-40 Score=396.42 Aligned_cols=148 Identities=45% Similarity=0.686 Sum_probs=117.0
Q ss_pred HHHHHHHhhcCccccCCCCcccCcceeeeEEEEEeeeccCCCCCCCCCCCCCccchhhhceeeeeecCCCccccccCCcc
Q 003293 2 AACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDG 81 (833)
Q Consensus 2 ~~~l~~G~~~R~~~~T~~N~~SSRSHaIfti~i~q~~~~~~~~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~kt~~~g 81 (833)
+.+|..|..+|++++|.||..|||||+||+|+|++.+... ....+|+|+|||||||||..+++++|
T Consensus 565 ~~~~~~g~~~r~~~~t~~n~~ssRSH~i~~i~~~~~~~~~--------------~~~~~~~l~lvDLAGsEr~~~~~~~g 630 (715)
T 4h1g_A 565 ITILNQANKKRSTAATKSNDHSSRSHSIFIIDLQGYNSLT--------------KESSYGTLNLIDLAGSERLNNSRAEG 630 (715)
T ss_dssp HHHHHHHHCC----------CGGGSEEEEEEEEEEEETTT--------------CCEEEEEEEEEECCCCCC--------
T ss_pred HHHHHHHHhccCcccccccCccccccEEEEEEEEEEecCC--------------CCEeEEEEEEEeCCCcccccccCChh
Confidence 5789999999999999999999999999999999865321 22457999999999999999999999
Q ss_pred cccchhhhhhhhhhHHHHHHHHhccccCCCCCccccCCCcchhhhhcccCCCCcceeEEeecCCCCCCHHHHHHHHHHHH
Q 003293 82 LRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYAN 161 (833)
Q Consensus 82 ~r~kE~~~IN~SL~aLg~vI~aL~~~~~~~~~~~iPyRdSkLTrLLqdsLgGns~t~mI~~VSP~~~~~~ETlsTL~fA~ 161 (833)
.|++|+.+||+||++||+||.+|+.+. ..|||||||||||||+|+|||||+|+|||||||+..+++||++||+||+
T Consensus 631 ~~~~E~~~IN~sL~~L~~vi~al~~~~----~~~vpyR~SkLT~lL~~slggn~~t~~i~~isp~~~~~~et~~tL~fa~ 706 (715)
T 4h1g_A 631 DRLKETQAINKSLSCLGDVIHSLNLKD----GSHVPYRNSKLTYLLKHSLGGNSKTLMFVNISPLTKDLNETINSLRFAT 706 (715)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHCS----CCCCCGGGCHHHHHTGGGTSTTCEEEEEEEECCBGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcC----CCcCCCccCHHHHHHHhhcCCCceEEEEEEECCChhhHHHHHHHHHHHH
Confidence 999999999999999999999998653 3599999999999999999999999999999999999999999999999
Q ss_pred Hhhccc
Q 003293 162 RARNIQ 167 (833)
Q Consensus 162 rar~I~ 167 (833)
||++|+
T Consensus 707 r~~~i~ 712 (715)
T 4h1g_A 707 KVNNTR 712 (715)
T ss_dssp HHCC--
T ss_pred Hhccce
Confidence 999996
No 29
>2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9
Probab=99.96 E-value=6.3e-31 Score=238.14 Aligned_cols=98 Identities=48% Similarity=0.703 Sum_probs=88.9
Q ss_pred hhhhhhhhhHHHHHHHHhccccCCCCCccccCCCcchhhhhcccCCCCcceeEEeecCCCCCCHHHHHHHHHHHHHhhcc
Q 003293 87 GVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNI 166 (833)
Q Consensus 87 ~~~IN~SL~aLg~vI~aL~~~~~~~~~~~iPyRdSkLTrLLqdsLgGns~t~mI~~VSP~~~~~~ETlsTL~fA~rar~I 166 (833)
+.+||+||++||+||.+|+++. ..||||||||||+||+|+|||||+|+|||||||+..+++||++||+||.||+.|
T Consensus 1 a~~IN~SL~~Lg~vI~aL~~~~----~~hvPyRdSkLT~lL~dsLgGnskt~mi~~vsp~~~~~~ETl~TL~fA~rak~i 76 (100)
T 2kin_B 1 AKNINKSLSALGNVISALAEGT----KTHVPYRDSKMTRILQDSLDGNCRTTIVICCSPSVFNEAETKSTLMFGQRAKTI 76 (100)
T ss_dssp CCBSSHHHHHHHHHHHHHHHTC----CSSCCGGGCHHHHHTHHHHHSSEEEEEEEEECCBGGGHHHHHHHHHHHHHHHTC
T ss_pred CCcchHHHHHHHHHHHHHHhcC----CCCCCCccchHHHHHHHHhcCCCceeEEEEeCcccchHHHHHHHHHHHHHHHhc
Confidence 4689999999999999999864 359999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCcchHH-HHHHHHHH
Q 003293 167 QNKPIVNRDPMSTE-MLKMRQQL 188 (833)
Q Consensus 167 ~n~p~vn~d~~~~~-i~~l~~~i 188 (833)
+|.|++|.++...+ +.+|+.++
T Consensus 77 ~~~~~~n~~~~~~~l~~~~~~e~ 99 (100)
T 2kin_B 77 KNTVSVNLELTAEEWKKKYEKEK 99 (100)
T ss_dssp EEEECCEEECCHHHHHHHHHHHH
T ss_pred cCcceeccCCCHHHHHHHHHHhh
Confidence 99999999887654 44566554
No 30
>3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9
Probab=99.95 E-value=1.3e-28 Score=230.19 Aligned_cols=88 Identities=53% Similarity=0.792 Sum_probs=82.4
Q ss_pred hhhhhHHHHHHHHhccccCCCCCccccCCCcchhhhhcccCCCCcceeEEeecCCCCCCHHHHHHHHHHHHHhhcccccc
Q 003293 91 NRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKP 170 (833)
Q Consensus 91 N~SL~aLg~vI~aL~~~~~~~~~~~iPyRdSkLTrLLqdsLgGns~t~mI~~VSP~~~~~~ETlsTL~fA~rar~I~n~p 170 (833)
|+||++||+||.+|+++.+ .||||||||||+||+|+|||||+|+|||||||+..+++||++||+||+||+.|+|.|
T Consensus 1 N~SL~~Lg~vi~aL~~~~~----~hvPyRdSkLT~lL~dsLggn~~t~~i~~isp~~~~~~eTl~TL~fa~rak~i~n~~ 76 (117)
T 3kin_B 1 NKSLSALGNVISALAEGTK----THVPYRDSKMTRILQDSLGGNCRTTIVICCSPSVFNEAETKSTLMFGQRAKTIKNTV 76 (117)
T ss_dssp CCHHHHHHHHHHHHHHSCC----SSCCGGGSHHHHHTHHHHHSSSEEEEEEEECCSGGGHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCHHHHHHHHHHHHhCCC----CCCCCcchHHHHHHHHHcCCCccceeeeeeCCCcccHHHHHHHHHHHHHhCcccCCc
Confidence 8999999999999998643 599999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCcchHHHH
Q 003293 171 IVNRDPMSTEML 182 (833)
Q Consensus 171 ~vn~d~~~~~i~ 182 (833)
++|.++....+.
T Consensus 77 ~~n~~~~~~~l~ 88 (117)
T 3kin_B 77 SVNLELTAEEWK 88 (117)
T ss_dssp CCCBCCCHHHHH
T ss_pred eecCcCCHHHHH
Confidence 999998765433
No 31
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=97.48 E-value=0.00036 Score=59.54 Aligned_cols=63 Identities=13% Similarity=0.245 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 644 NLLQYMFNSLADARCQLWEKDIEIKEMKEQLKELVGLLRQSEVRRKEVEEELKLREQAVAITL 706 (833)
Q Consensus 644 ~~l~~L~~~~~~~r~~~~~~~~el~e~k~~~~~l~~~l~~~e~q~~~l~~~~~~~~~~~~~~l 706 (833)
+.+..|++++..++++++.+.++|..+++.+..+++.|++++.++++|.++++.+++++--+-
T Consensus 10 ~~~leLQSALeaEIqAKQ~i~EELs~vr~~ni~~eskL~eae~rn~eL~~e~~~l~~~~eelq 72 (81)
T 1wt6_A 10 VTLRELQEALEEEVLTRQSLSREMEAIRTDNQNFASQLREAEARNRDLEAHVRQLQERMELLQ 72 (81)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567899999999999999999999999999999999999999999999999999999998743
No 32
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=97.15 E-value=0.00063 Score=86.17 Aligned_cols=12 Identities=25% Similarity=0.689 Sum_probs=5.5
Q ss_pred cceeEEeecCCC
Q 003293 135 SRTVMIACISPA 146 (833)
Q Consensus 135 s~t~mI~~VSP~ 146 (833)
|...+|-||-|.
T Consensus 676 t~phfvRCIkPN 687 (1184)
T 1i84_S 676 TNPNFVRCIIPN 687 (1184)
T ss_dssp SEEEECCEECCC
T ss_pred cCCCceeeeCCC
Confidence 344444455443
No 33
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=97.12 E-value=0.0011 Score=83.97 Aligned_cols=12 Identities=42% Similarity=0.551 Sum_probs=5.9
Q ss_pred eeeeecCCCccc
Q 003293 63 LHLVDLAGSERA 74 (833)
Q Consensus 63 L~lVDLAGSEr~ 74 (833)
|-++|.+|-|..
T Consensus 460 IgvLDi~GFE~f 471 (1184)
T 1i84_S 460 LGILDIAGFEIF 471 (1184)
T ss_dssp EEEEECCCCCCC
T ss_pred EEEeecCCcCCC
Confidence 444555555544
No 34
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=94.85 E-value=0.48 Score=43.87 Aligned_cols=102 Identities=18% Similarity=0.288 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 003293 327 ALKQHFGKKIAELEDEKRTVQKERDHLLTEIENLASNSDGQTQKLQDVHAHKLKSLEAQILDLKKKQENQVQLLKQKQKS 406 (833)
Q Consensus 327 ~lkq~yekKi~eLE~ei~~LqkErdeLl~eL~~~~~~~~~~~~KL~e~~ekkLqeLE~ei~~LkkK~~~q~~llk~K~k~ 406 (833)
.+...|+..|..|..+|..+..++..|..++.++....++...|..++... -+.+|.++..|++-..+ . .=.+...
T Consensus 13 ~~~~~ye~~I~~LR~qid~~~~e~a~l~leldn~~~~~edfk~KyE~E~~~-r~~~E~di~~lrK~lD~-~--~l~r~dL 88 (119)
T 3ol1_A 13 RLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLAEDIMRLREKLQEEMLQ-REEAENTLQSFRQDVDN-A--SLARLDL 88 (119)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH-H--HHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH-HHHHHHHHHHhhhcccH-H--HHHHHHH
Confidence 356789999999999999999999999988887644334444455444432 35677788777765543 1 1234456
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 407 DEAAKRLQDEIQFIKAQKVQLQHRIK 432 (833)
Q Consensus 407 E~~ik~L~~EIq~mK~qKv~L~kkmk 432 (833)
|.++..|..||.-+|+-...-++.|+
T Consensus 89 E~~iesL~eEl~FLKk~heeEl~eLq 114 (119)
T 3ol1_A 89 ERKVESLQEEIAFLKKLHEEEIQELQ 114 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66777777777777776666555543
No 35
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=94.54 E-value=4.2 Score=40.50 Aligned_cols=55 Identities=11% Similarity=0.091 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 328 LKQHFGKKIAELEDEKRTVQKERDHLLTEIENLASNSDGQTQKLQDVHAHKLKSLEAQILDLKKKQ 393 (833)
Q Consensus 328 lkq~yekKi~eLE~ei~~LqkErdeLl~eL~~~~~~~~~~~~KL~e~~ekkLqeLE~ei~~LkkK~ 393 (833)
.-..|.....++.++...++.|-++... ..+.|..+.+.-|.++++++.+|+.+.
T Consensus 11 e~~ywk~~~~~~~q~~~~le~El~EFqe-----------sSrELE~ELE~eL~~~Ek~~~~L~~~~ 65 (189)
T 2v71_A 11 ETAYWKELSMKYKQSFQEARDELVEFQE-----------GSRELEAELEAQLVQAEQRNRDLQADN 65 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456777777777777777777666532 235566667777777777777776543
No 36
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=94.23 E-value=1.1 Score=56.12 Aligned_cols=15 Identities=27% Similarity=0.667 Sum_probs=12.2
Q ss_pred CcceeEEeecCCCCC
Q 003293 134 NSRTVMIACISPADI 148 (833)
Q Consensus 134 ns~t~mI~~VSP~~~ 148 (833)
.|...+|-||-|.+.
T Consensus 653 ~t~phfVRCIkPN~~ 667 (1080)
T 2dfs_A 653 ATTPHYVRCIKPNDF 667 (1080)
T ss_dssp SSEEEEEEEECCCSS
T ss_pred hcCCeeEEEecCCCC
Confidence 477889999999764
No 37
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=93.72 E-value=7.5 Score=40.37 Aligned_cols=13 Identities=8% Similarity=0.217 Sum_probs=7.2
Q ss_pred HHHHHHHHHhhhh
Q 003293 488 TKRLKELLESRKS 500 (833)
Q Consensus 488 ~kRLK~~le~rK~ 500 (833)
..+|-..|++-+.
T Consensus 174 ~~~lL~~Yerir~ 186 (256)
T 3na7_A 174 EPKIYSFYERIRR 186 (256)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 4456566665443
No 38
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=93.53 E-value=8.1 Score=40.12 Aligned_cols=12 Identities=17% Similarity=0.301 Sum_probs=4.4
Q ss_pred HHHHHHHHHHHH
Q 003293 412 RLQDEIQFIKAQ 423 (833)
Q Consensus 412 ~L~~EIq~mK~q 423 (833)
.+..++..+..+
T Consensus 154 e~~~e~~~l~~~ 165 (256)
T 3na7_A 154 NIKETQQIIFKK 165 (256)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333333333333
No 39
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=93.09 E-value=2.2 Score=53.40 Aligned_cols=86 Identities=17% Similarity=0.181 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 003293 384 AQILDLKKKQENQVQLLKQKQKSDEAAKRLQDEIQFIKAQKVQLQHRIKQEAEQFRQWKASREKELLQLRKEGRRNEYER 463 (833)
Q Consensus 384 ~ei~~LkkK~~~q~~llk~K~k~E~~ik~L~~EIq~mK~qKv~L~kkmkeE~ek~r~~k~~~eKEi~qLKke~rK~~~e~ 463 (833)
.++.+|++...+-....+.+.+.+.+++.|+.||..++.+..++.+..+.-.++....+...+..+..|+++..+-+.++
T Consensus 960 ~e~~~L~~~l~~le~~~~e~~~~~~~v~~L~~e~~~l~~~~~~~~ke~~~lee~~~~~~~~L~~kv~~L~~e~~~L~qq~ 1039 (1080)
T 2dfs_A 960 TETEKLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQTEKKTIEEWADKYKHETEQLVSELKEQNTLLKTEK 1039 (1080)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333344455555666777777777777777666666666566666666666666677777777766666
Q ss_pred HHHHHH
Q 003293 464 HKLQAL 469 (833)
Q Consensus 464 ~kLe~~ 469 (833)
..|+..
T Consensus 1040 ~~l~~~ 1045 (1080)
T 2dfs_A 1040 EELNRR 1045 (1080)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666643
No 40
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=92.69 E-value=8.7 Score=38.22 Aligned_cols=30 Identities=20% Similarity=0.198 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 205 DEVQVLKERIAWLEAANEDLCRELHEYRSR 234 (833)
Q Consensus 205 ~~~~~Lkeki~~Le~ene~L~~EL~e~r~r 234 (833)
+++..-+.....+......+..+|.++...
T Consensus 10 ee~~ywk~~~~~~~q~~~~le~El~EFqes 39 (189)
T 2v71_A 10 EETAYWKELSMKYKQSFQEARDELVEFQEG 39 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444445555555555443
No 41
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=91.73 E-value=10 Score=36.92 Aligned_cols=62 Identities=16% Similarity=0.224 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003293 299 MDKELNELNRRLEEKESEMKLVGGS--DTAALKQHFGKKIAELEDEKRTVQKERDHLLTEIENL 360 (833)
Q Consensus 299 l~~EL~eLnkqLe~KE~e~k~~~~~--~~~~lkq~yekKi~eLE~ei~~LqkErdeLl~eL~~~ 360 (833)
|.++|.++|..+....+-...+-+. ++..-.++.+..+.+|+..+..++..++.|..++..+
T Consensus 11 LekQL~E~n~kLk~EsE~~~rlkK~~tEl~k~~~~~E~~~rELq~~~~~L~~~k~~Leke~~~L 74 (168)
T 3o0z_A 11 LQKQLEEANDLLRTESDTAVRLRKSHTEMSKSISQLESLNRELQERNRILENSKSQTDKDYYQL 74 (168)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455556665554433322222111 2223346677888888888888888888887776554
No 42
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A
Probab=90.08 E-value=16 Score=36.36 Aligned_cols=26 Identities=19% Similarity=0.216 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 334 KKIAELEDEKRTVQKERDHLLTEIEN 359 (833)
Q Consensus 334 kKi~eLE~ei~~LqkErdeLl~eL~~ 359 (833)
++|..|..++..+....+.+...+..
T Consensus 6 ~~~~~l~~~~~~~~~~~~~l~~~l~~ 31 (284)
T 1c1g_A 6 KKMQMLKLDKENALDRADEAEADKKA 31 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 45555555555555555555444443
No 43
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=86.70 E-value=6.2 Score=45.52 Aligned_cols=47 Identities=17% Similarity=0.208 Sum_probs=27.9
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHhHhhhhhHHHHHHHHHHHHHHHhh
Q 003293 452 LRKEGRRNEYERHKLQALNQRQKLVLQRKTEEAAMATKRLKELLESR 498 (833)
Q Consensus 452 LKke~rK~~~e~~kLe~~~~kQ~~VLkRKtEEa~aa~kRLK~~le~r 498 (833)
.+++.++-+.++.+++...+.++..+.+-..|....+..+|++.+.-
T Consensus 535 ~~~~~~~~~~~~~~le~~~~~~~~~~~~l~~e~~~~~~~~~~l~~~~ 581 (597)
T 3oja_B 535 KQKETEDLEQENIALEKQLDNKRAKQAELRQETSLKRQKVKQLEAKK 581 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhcchhhHHhhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33344444444555555555555555566667777778888777653
No 44
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=85.00 E-value=15 Score=42.36 Aligned_cols=34 Identities=12% Similarity=0.245 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 407 DEAAKRLQDEIQFIKAQKVQLQHRIKQEAEQFRQ 440 (833)
Q Consensus 407 E~~ik~L~~EIq~mK~qKv~L~kkmkeE~ek~r~ 440 (833)
++++..++.+++.++++...+.+++++..++...
T Consensus 529 ~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~ 562 (597)
T 3oja_B 529 RTEADAKQKETEDLEQENIALEKQLDNKRAKQAE 562 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhhhhcchhhHHhhhHHHHHHHhhhhhHHHH
Confidence 3334444445555555555555555444444433
No 45
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=82.56 E-value=38 Score=33.00 Aligned_cols=75 Identities=15% Similarity=0.189 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 375 HAHKLKSLEAQILDLKKKQENQVQLLKQKQKSDEAAKRLQDEIQFIKAQKVQLQHRIKQEAEQFRQWKASREKELLQLRK 454 (833)
Q Consensus 375 ~ekkLqeLE~ei~~LkkK~~~q~~llk~K~k~E~~ik~L~~EIq~mK~qKv~L~kkmkeE~ek~r~~k~~~eKEi~qLKk 454 (833)
+..|+..||.++.++..++... .....++++.+.|+..-.++.....+.|++-.......+..++++++.|..
T Consensus 4 ~neKi~~LekQL~E~n~kLk~E-------sE~~~rlkK~~tEl~k~~~~~E~~~rELq~~~~~L~~~k~~Leke~~~LQa 76 (168)
T 3o0z_A 4 ANEKLSQLQKQLEEANDLLRTE-------SDTAVRLRKSHTEMSKSISQLESLNRELQERNRILENSKSQTDKDYYQLQA 76 (168)
T ss_dssp ------CTHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHh-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567778888888888665543 345566777778888888888888888888888888888888888877765
Q ss_pred Hh
Q 003293 455 EG 456 (833)
Q Consensus 455 e~ 456 (833)
..
T Consensus 77 ~L 78 (168)
T 3o0z_A 77 IL 78 (168)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 46
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=81.78 E-value=99 Score=43.13 Aligned_cols=24 Identities=21% Similarity=0.328 Sum_probs=15.1
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHH
Q 003293 295 LQNSMDKELNELNRRLEEKESEMK 318 (833)
Q Consensus 295 ~Q~~l~~EL~eLnkqLe~KE~e~k 318 (833)
.-..|..+|.++..+|++|..+..
T Consensus 1935 ~V~~l~~~L~~~~~~L~~k~~ea~ 1958 (3245)
T 3vkg_A 1935 QVKDLQVSLAQKNRELDVKNEQAN 1958 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334566777777777776665544
No 47
>3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament, structural; 2.45A {Homo sapiens} PDB: 3ssu_A
Probab=81.21 E-value=25 Score=30.85 Aligned_cols=72 Identities=18% Similarity=0.329 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 003293 331 HFGKKIAELEDEKRTVQKERDHLLTEIENLASNSDGQTQKLQDVHAHKLKSLEAQILDLKKKQENQVQLLKQKQKSDEAA 410 (833)
Q Consensus 331 ~yekKi~eLE~ei~~LqkErdeLl~eL~~~~~~~~~~~~KL~e~~ekkLqeLE~ei~~LkkK~~~q~~llk~K~k~E~~i 410 (833)
.|=.|+..||++...|+.+...+... ....+...|+..|..|..+|..+. ..+.+.+-++
T Consensus 20 syIdKVR~LEqqN~~Le~~i~~l~~~----------~~~~~~~~ye~~i~~Lr~~i~~~~----------~ek~~l~~e~ 79 (93)
T 3s4r_A 20 NLIDKVRFLEQQNKILLAELEQLKGQ----------GKSRLGDLYEEEMRELRRQVDQLT----------NDKARVEVER 79 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhc----------cCCCcHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHH
Confidence 46688999999999888887665422 112344445555555544444443 3455556666
Q ss_pred HHHHHHHHHHHH
Q 003293 411 KRLQDEIQFIKA 422 (833)
Q Consensus 411 k~L~~EIq~mK~ 422 (833)
..|..++..+|.
T Consensus 80 dnl~~~~~~~k~ 91 (93)
T 3s4r_A 80 DNLAEDIMRLRE 91 (93)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 667777766654
No 48
>3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens}
Probab=80.63 E-value=7.6 Score=33.74 Aligned_cols=83 Identities=20% Similarity=0.336 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 003293 336 IAELEDEKRTVQKERDHLLTEIENLASNSDGQTQKLQDVHAHKLKSLEAQILDLKKKQENQVQLLKQKQKSDEAAKRLQD 415 (833)
Q Consensus 336 i~eLE~ei~~LqkErdeLl~eL~~~~~~~~~~~~KL~e~~ekkLqeLE~ei~~LkkK~~~q~~llk~K~k~E~~ik~L~~ 415 (833)
|.+|..+|..+..++..|..++.++....++...|..++...| +..|.++..|++-..+ .-=.+...|.++..|..
T Consensus 2 i~eLr~qi~~l~~e~~~l~~e~dn~~~~~edfk~KyE~E~~~R-~~~E~d~~~LrkdvD~---a~l~r~dLE~kvesL~e 77 (86)
T 3swk_A 2 MRELRRQVDQLTNDKARVEVERDNLAEDIMRLREKLQEEMLQR-EEAENTLQSFRQDVDN---ASLARLDLERKVESLQE 77 (86)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHTTHHH---HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhHHH---HHHHHHHHHHHHHHHHH
Confidence 4556666666666666666666665333334445555544333 6788888888875553 12234567777888888
Q ss_pred HHHHHHH
Q 003293 416 EIQFIKA 422 (833)
Q Consensus 416 EIq~mK~ 422 (833)
||.-+|+
T Consensus 78 El~fLkk 84 (86)
T 3swk_A 78 EIAFLKK 84 (86)
T ss_dssp HHHHHTT
T ss_pred HHHHHhh
Confidence 8877663
No 49
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=75.99 E-value=50 Score=30.57 Aligned_cols=25 Identities=20% Similarity=0.413 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 334 KKIAELEDEKRTVQKERDHLLTEIE 358 (833)
Q Consensus 334 kKi~eLE~ei~~LqkErdeLl~eL~ 358 (833)
....+|+.....+..++..|..+|.
T Consensus 34 ~~r~ele~~~~~l~~Ek~~L~~qL~ 58 (129)
T 2fxo_A 34 ARRKELEEKMVSLLQEKNDLQLQVQ 58 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455555555555555555544
No 50
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=75.12 E-value=41 Score=31.22 Aligned_cols=40 Identities=18% Similarity=0.248 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHhHHHHHHHHH
Q 003293 375 HAHKLKSLEAQILDLKKK----QENQVQLLKQKQKSDEAAKRLQ 414 (833)
Q Consensus 375 ~ekkLqeLE~ei~~LkkK----~~~q~~llk~K~k~E~~ik~L~ 414 (833)
+...|..||.++..++.. ..+...|+..|...+.+|..|+
T Consensus 82 ~q~~i~~lE~eL~~~r~em~~ql~EYq~Ll~vKl~Ld~EIatYR 125 (131)
T 3tnu_A 82 IQEMIGSVEEQLAQLRCEMEQQNQEYKILLDVKTRLEQEIATYR 125 (131)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555666666666666532 2334455666666665555443
No 51
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=74.56 E-value=46 Score=30.76 Aligned_cols=39 Identities=21% Similarity=0.226 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHhHHHHHHHH
Q 003293 375 HAHKLKSLEAQILDLKKK----QENQVQLLKQKQKSDEAAKRL 413 (833)
Q Consensus 375 ~ekkLqeLE~ei~~LkkK----~~~q~~llk~K~k~E~~ik~L 413 (833)
+..+|..||.++..++.. ..+...|+..|...|.+|..|
T Consensus 80 ~q~~i~~lE~eL~~~r~e~~~ql~EYq~LlnvKl~Ld~EIatY 122 (129)
T 3tnu_B 80 ARNKLAELEEALQKAKQDMARLLREYQELMNTKLALDVEIATY 122 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455566666666666532 233345555555555555544
No 52
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=69.39 E-value=52 Score=30.97 Aligned_cols=18 Identities=33% Similarity=0.449 Sum_probs=7.8
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 003293 411 KRLQDEIQFIKAQKVQLQ 428 (833)
Q Consensus 411 k~L~~EIq~mK~qKv~L~ 428 (833)
..|+.++..+..+.++|.
T Consensus 113 ~~l~~~~~~l~~~~~~le 130 (138)
T 3hnw_A 113 KELKSEINKYQKNIVKLE 130 (138)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 334444444444444443
No 53
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=69.32 E-value=67 Score=29.17 Aligned_cols=29 Identities=17% Similarity=0.221 Sum_probs=23.3
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 531 LEVMVNVHEVRFDYEKQSQVRAALAEELA 559 (833)
Q Consensus 531 ~ev~~~~~e~~~~le~l~~~R~~L~~el~ 559 (833)
..+++++.+++.-|+.-++..+-|..||.
T Consensus 73 R~t~~SLeD~E~k~n~aiErnalLE~El~ 101 (111)
T 2v66_B 73 RATIVSLEDFEQRLNQAIERNAFLESELD 101 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567888888888888888888888875
No 54
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=66.45 E-value=19 Score=33.93 Aligned_cols=58 Identities=16% Similarity=0.145 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 334 KKIAELEDEKRTVQKERDHLLTEIENLASNSDGQTQKLQDVHAHKLKSLEAQILDLKKK 392 (833)
Q Consensus 334 kKi~eLE~ei~~LqkErdeLl~eL~~~~~~~~~~~~KL~e~~ekkLqeLE~ei~~LkkK 392 (833)
.+...|+.++..+.+|...|.++|........+. .+--+.+..++++|+.++..|...
T Consensus 75 ~~~~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~-~~e~~~l~~~~~~l~~~~~~le~~ 132 (138)
T 3hnw_A 75 KMADSLSLDIENKDKEIYDLKHELIAAQIKAESS-AKEIKELKSEINKYQKNIVKLETE 132 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555555555555555554432111111 111222455555555555555433
No 55
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=66.16 E-value=53 Score=29.11 Aligned_cols=16 Identities=19% Similarity=0.324 Sum_probs=7.0
Q ss_pred HHHHHHHHHHHHHHHH
Q 003293 375 HAHKLKSLEAQILDLK 390 (833)
Q Consensus 375 ~ekkLqeLE~ei~~Lk 390 (833)
.+.....++.++.+|.
T Consensus 45 aE~~~~~ie~ElEeLT 60 (97)
T 2eqb_B 45 AEEEADKLNKEVEDLT 60 (97)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3344444444444443
No 56
>3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament, structural; 2.45A {Homo sapiens} PDB: 3ssu_A
Probab=65.58 E-value=14 Score=32.54 Aligned_cols=36 Identities=17% Similarity=0.349 Sum_probs=30.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003293 325 TAALKQHFGKKIAELEDEKRTVQKERDHLLTEIENL 360 (833)
Q Consensus 325 ~~~lkq~yekKi~eLE~ei~~LqkErdeLl~eL~~~ 360 (833)
...+...|+..|.+|..+|..+..++..|..++.++
T Consensus 47 ~~~~~~~ye~~i~~Lr~~i~~~~~ek~~l~~e~dnl 82 (93)
T 3s4r_A 47 KSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNL 82 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445778899999999999999999999988887665
No 57
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=65.40 E-value=86 Score=28.97 Aligned_cols=17 Identities=24% Similarity=0.249 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHHHHH
Q 003293 437 QFRQWKASREKELLQLR 453 (833)
Q Consensus 437 k~r~~k~~~eKEi~qLK 453 (833)
.+-..|..++-||+.-+
T Consensus 109 ~Ll~vKl~Ld~EIatYR 125 (131)
T 3tnu_A 109 ILLDVKTRLEQEIATYR 125 (131)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 45556666666665543
No 58
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Probab=65.06 E-value=1.7e+02 Score=33.00 Aligned_cols=81 Identities=11% Similarity=0.130 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhHH
Q 003293 329 KQHFGKKIAELEDEKRTVQKERDHLLTEIENLASNSDGQTQKLQDVHAHKLKSLEAQILDLKKKQEN-QVQLLKQKQKSD 407 (833)
Q Consensus 329 kq~yekKi~eLE~ei~~LqkErdeLl~eL~~~~~~~~~~~~KL~e~~ekkLqeLE~ei~~LkkK~~~-q~~llk~K~k~E 407 (833)
...|+.+|...+.++.++++.-.. .+..|+++|.++..+-..++..... ..+=...|+..+
T Consensus 4 ~a~yq~~la~yq~elarvqkana~------------------aka~Ye~~~ae~~a~n~~i~aeNeaikkrNa~aka~Ye 65 (497)
T 3iox_A 4 EADYQAKLTAYQTELARVQKANAD------------------AKAAYEAAVAANNAANAALTAENTAIKKRNADAKADYE 65 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH------------------HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 456778887777777776655433 2445677776666655555432222 122223456666
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 003293 408 EAAKRLQDEIQFIKAQKVQL 427 (833)
Q Consensus 408 ~~ik~L~~EIq~mK~qKv~L 427 (833)
.++.+++.++..-++....-
T Consensus 66 ~~l~kY~~dlakY~~~~AeY 85 (497)
T 3iox_A 66 AKLAKYQADLAKYQKDLADY 85 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 67777777776665554333
No 59
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=64.93 E-value=66 Score=37.50 Aligned_cols=16 Identities=25% Similarity=0.329 Sum_probs=12.6
Q ss_pred ceeeeeecCCCccccc
Q 003293 61 AKLHLVDLAGSERAKR 76 (833)
Q Consensus 61 skL~lVDLAGSEr~~k 76 (833)
..+.|||++|.....+
T Consensus 91 ~~i~LiDTpGi~~~~~ 106 (592)
T 1f5n_A 91 HILVLLDTEGLGDVEK 106 (592)
T ss_dssp CEEEEEEECCBCCGGG
T ss_pred ceEEEecCCCcCcccc
Confidence 4689999999876544
No 60
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=64.89 E-value=1.6e+02 Score=32.69 Aligned_cols=32 Identities=9% Similarity=-0.061 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 424 KVQLQHRIKQEAEQFRQWKASREKELLQLRKE 455 (833)
Q Consensus 424 Kv~L~kkmkeE~ek~r~~k~~~eKEi~qLKke 455 (833)
..+.++.++++.++.+..++..++++..+..+
T Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (487)
T 3oja_A 433 AIRDWDMYQHKETQLAEENARLKKLNGEADLA 464 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhhhhhhhHHHHHHHHhhhhhhhhhhhhhh
Confidence 33445555555555555555555555444433
No 61
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=63.02 E-value=85 Score=35.02 Aligned_cols=19 Identities=21% Similarity=0.370 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 003293 376 AHKLKSLEAQILDLKKKQE 394 (833)
Q Consensus 376 ekkLqeLE~ei~~LkkK~~ 394 (833)
+++-++++..+...++...
T Consensus 366 ~~~~~~le~~~~~~~~~~~ 384 (487)
T 3oja_A 366 EQKKKALDEQVSNGRRAHA 384 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 3444445555555544333
No 62
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=62.48 E-value=93 Score=28.36 Aligned_cols=81 Identities=14% Similarity=0.163 Sum_probs=45.1
Q ss_pred HHHHHHHHHhHHHhhhhhccccccccccccCHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 608 NSLVAMASQLSEAEERDRLFTNRGRWNQLRSMADAKNLLQYMFNSLADARCQLWEKDIEIKEMKEQLKELVGLLRQSEVR 687 (833)
Q Consensus 608 ~~l~~l~~kl~e~ee~~r~~~~~~rw~~irs~~eAk~~l~~L~~~~~~~r~~~~~~~~el~e~k~~~~~l~~~l~~~e~q 687 (833)
+.-.-|+.+|+.+.+..+ ++...|-+.-+.+.+.-.+-...+...+.++.+++..+..|.-.|++..+.
T Consensus 25 N~T~lLq~qLTqAQe~l~-----------~~eaQAaTCNqTV~tL~~SL~~ekaq~q~~vqeLqgEI~~Lnq~Lq~a~ae 93 (121)
T 3mq7_A 25 NVTHLLQQELTEAQKGFQ-----------DVEAQAATANHTVMALMASLDAEKAQGQKKVEELEGEITTLNHKLQDASAE 93 (121)
T ss_dssp HHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333455666776655432 223344444444444444433333333556777777777777777777777
Q ss_pred HHHHHHHHHHHH
Q 003293 688 RKEVEEELKLRE 699 (833)
Q Consensus 688 ~~~l~~~~~~~~ 699 (833)
.+.|-.+...+.
T Consensus 94 ~erlr~~~~~~~ 105 (121)
T 3mq7_A 94 VERLRRENQVLS 105 (121)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHhhchhhh
Confidence 666655554433
No 63
>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A
Probab=61.69 E-value=1.2e+02 Score=29.21 Aligned_cols=95 Identities=14% Similarity=0.225 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 003293 334 KKIAELEDEKRTVQKERDHLLTEIENLASNSDGQTQKLQDVHAHKLKSLEAQILDLKKKQENQVQLLKQKQKSDEAAKRL 413 (833)
Q Consensus 334 kKi~eLE~ei~~LqkErdeLl~eL~~~~~~~~~~~~KL~e~~ekkLqeLE~ei~~LkkK~~~q~~llk~K~k~E~~ik~L 413 (833)
.+....+.++..|+.+.+-+-..|..+.. +..+...-.+.|+.+|+.|..++.+...+...- .+.-.+.+..+.+|
T Consensus 35 ERae~aE~k~~eLEeeL~~v~~nlKsLE~-seekasqrEd~yEeqIk~L~~kLKEAE~RAE~A---ERsv~kLEk~id~l 110 (155)
T 2efr_A 35 ERAELSEGKSAELEEELKTVTNNLKSLEA-QAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFA---ERSVTKLEKSIDDL 110 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
Confidence 44444444444444444445455554432 122222233445555555555555444333321 12223344445555
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 003293 414 QDEIQFIKAQKVQLQHRIK 432 (833)
Q Consensus 414 ~~EIq~mK~qKv~L~kkmk 432 (833)
..+|..-|.....+...|.
T Consensus 111 Ed~L~~~Kek~~~i~~eLd 129 (155)
T 2efr_A 111 EDELYAQKLKYKAISEEMK 129 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 5555555555555544444
No 64
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=60.49 E-value=1e+02 Score=28.28 Aligned_cols=17 Identities=18% Similarity=0.218 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHHHHH
Q 003293 437 QFRQWKASREKELLQLR 453 (833)
Q Consensus 437 k~r~~k~~~eKEi~qLK 453 (833)
.+-..|..++-||+.-+
T Consensus 107 ~LlnvKl~Ld~EIatYR 123 (129)
T 3tnu_B 107 ELMNTKLALDVEIATYR 123 (129)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 45555666666665543
No 65
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=60.48 E-value=61 Score=27.78 Aligned_cols=54 Identities=24% Similarity=0.287 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHh----HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 648 YMFNSLADARCQLW----EKDIEIKEMKEQLKELVGLLRQSEVRRKEVEEELKLREQA 701 (833)
Q Consensus 648 ~L~~~~~~~r~~~~----~~~~el~e~k~~~~~l~~~l~~~e~q~~~l~~~~~~~~~~ 701 (833)
.+|+.+..-+.+.- .++++|.++|++...+.....++...+..|.++...+.++
T Consensus 6 ElleqLE~KIq~avdtI~lLqmEieELKekN~~L~~e~~e~~~~~~~L~~en~qLk~E 63 (81)
T 2jee_A 6 EVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQ 63 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 45555555554443 4889999999999999988888555555555555544444
No 66
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=58.01 E-value=1e+02 Score=27.31 Aligned_cols=14 Identities=14% Similarity=0.102 Sum_probs=5.8
Q ss_pred HHHHHHHHHHHHHH
Q 003293 377 HKLKSLEAQILDLK 390 (833)
Q Consensus 377 kkLqeLE~ei~~Lk 390 (833)
+|++.+|.++....
T Consensus 51 kk~~~lE~eld~~e 64 (101)
T 3u1c_A 51 KQLRVTEDSRDQVL 64 (101)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 33444444444433
No 67
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=57.31 E-value=62 Score=36.76 Aligned_cols=18 Identities=33% Similarity=0.403 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 003293 380 KSLEAQILDLKKKQENQV 397 (833)
Q Consensus 380 qeLE~ei~~LkkK~~~q~ 397 (833)
.+|+..|..|+.+..+|.
T Consensus 113 ~ELRRrIqyLKekVdnQl 130 (562)
T 3ghg_A 113 EDLRSRIEVLKRKVIEKV 130 (562)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 366666666666666654
No 68
>1x79_B RAB GTPase binding effector protein 1; rabaptin5, GGA protein, GAT domain, intracellular trafficking, protein transport; 2.41A {Homo sapiens} SCOP: h.1.27.2
Probab=55.54 E-value=1.2e+02 Score=27.51 Aligned_cols=34 Identities=21% Similarity=0.217 Sum_probs=19.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh
Q 003293 536 NVHEVRFDYEKQSQVRAALAEELAVLKQVDEFAS 569 (833)
Q Consensus 536 ~~~e~~~~le~l~~~R~~L~~el~~Lk~~~e~~~ 569 (833)
....+..+|-+|..+|+.++.+|..|...+++..
T Consensus 71 ~q~~vq~qL~~Lt~~Re~V~~eL~rLQ~eNd~L~ 104 (112)
T 1x79_B 71 AKRDVQEQMAVLMQSREQVSEELVRLQKDNDSLQ 104 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchh
Confidence 3457788999999999999999999998877643
No 69
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=53.07 E-value=1.6e+02 Score=28.19 Aligned_cols=83 Identities=17% Similarity=0.250 Sum_probs=41.5
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhHH
Q 003293 292 HTLLQNSMDKELNELNRRLEEKESEMKLVGGSDTAALKQHFGKKIAELEDEKRTVQKERDHLLTEIENLASNSDGQTQKL 371 (833)
Q Consensus 292 ~~~~Q~~l~~EL~eLnkqLe~KE~e~k~~~~~~~~~lkq~yekKi~eLE~ei~~LqkErdeLl~eL~~~~~~~~~~~~KL 371 (833)
....|..|+.+|....++|+.....+..+. ..+ .++..|..+......|...|...+..- ...
T Consensus 11 Ain~qs~LeD~L~~~R~el~~~~~ri~~lE-----~~r----~~~~~l~~~~~~~~~e~~~L~~~l~~E--------~~~ 73 (154)
T 2ocy_A 11 SVDKQSHLEEQLNKSLKTIASQKAAIENYN-----QLK----EDYNTLKRELSDRDDEVKRLREDIAKE--------NEL 73 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTH-----HHH----HHHHHHHTHHHHHHHHHHHHHHHHHHH--------HHH
T ss_pred HHHhhccHHHHHHHHHHHHHHHHHHHHHHH-----HHH----HHHHHHHHHHhhhhHHHHHHHHHHHHH--------HHH
Confidence 344577777777777776665444333221 112 233334444555555555554444321 223
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 003293 372 QDVHAHKLKSLEAQILDLKK 391 (833)
Q Consensus 372 ~e~~ekkLqeLE~ei~~Lkk 391 (833)
+...+.....++.++.+|..
T Consensus 74 R~~aE~~~~~ie~ElEeLTa 93 (154)
T 2ocy_A 74 RTKAEEEADKLNKEVEDLTA 93 (154)
T ss_dssp HHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33345555666666666653
No 70
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=52.37 E-value=78 Score=28.18 Aligned_cols=28 Identities=29% Similarity=0.501 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 332 FGKKIAELEDEKRTVQKERDHLLTEIEN 359 (833)
Q Consensus 332 yekKi~eLE~ei~~LqkErdeLl~eL~~ 359 (833)
..++|..|+.+...|..+++.|..+|+.
T Consensus 17 lr~ei~~Le~E~~rLr~~~~~LE~~Le~ 44 (100)
T 1go4_E 17 LRLKVEELEGERSRLEEEKRMLEAQLER 44 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3478888888888888889888888887
No 71
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=50.31 E-value=40 Score=28.27 Aligned_cols=21 Identities=14% Similarity=0.221 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 003293 333 GKKIAELEDEKRTVQKERDHL 353 (833)
Q Consensus 333 ekKi~eLE~ei~~LqkErdeL 353 (833)
++.|.+.+.+|..|+.+.|++
T Consensus 46 Ek~L~ekd~eI~~LqseLDKf 66 (72)
T 3nmd_A 46 ELELDQKDELIQMLQNELDKY 66 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 356666666666666666654
No 72
>2k48_A Nucleoprotein; viral protein; NMR {Andes virus}
Probab=49.84 E-value=1.4e+02 Score=26.63 Aligned_cols=62 Identities=11% Similarity=0.235 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH----hccCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 335 KIAELEDEKRTVQKERDHLLTEIEN----LASNSDGQTQKLQDVHAHKLKSLEAQILDLKKKQENQ 396 (833)
Q Consensus 335 Ki~eLE~ei~~LqkErdeLl~eL~~----~~~~~~~~~~KL~e~~ekkLqeLE~ei~~LkkK~~~q 396 (833)
.|.+|+.++...+.+.......|.. .....|+-.+..=..|+.-++.++.+|.+|++...+.
T Consensus 36 ~ieeLQ~Ei~~~E~QL~iArQKLkdAe~~~E~DPDevNK~tl~~R~~~Vsalq~KiaeLKrqLAd~ 101 (107)
T 2k48_A 36 TLQELQENITAHEQQLVTARQKLKDAEKAVEVDPDDVNKSTLQNRRAAVSTLETKLGELKRQLADL 101 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555544444333333322 2223444333333446777888888888888766554
No 73
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=49.71 E-value=1.4e+02 Score=26.41 Aligned_cols=55 Identities=20% Similarity=0.361 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 331 HFGKKIAELEDEKRTVQKERDHLLTEIENLASNSDGQTQKLQDVHAHKLKSLEAQILDLKKKQ 393 (833)
Q Consensus 331 ~yekKi~eLE~ei~~LqkErdeLl~eL~~~~~~~~~~~~KL~e~~ekkLqeLE~ei~~LkkK~ 393 (833)
+.+..|..|..++..++.+.|.+...|... ..++.+ -++.....|.++..|.++.
T Consensus 41 ~~E~Ei~sL~kk~~~lE~eld~~ee~L~ea-------~~kLee-~ek~~~~aE~ev~~L~Rri 95 (101)
T 3u1c_A 41 QLEDDIVQLEKQLRVTEDSRDQVLEELHKS-------EDSLLF-AEENAAKAESEVASLNRRI 95 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 344556666666666666666666555433 233433 4566677777777776554
No 74
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=48.08 E-value=3.2e+02 Score=31.70 Aligned_cols=10 Identities=10% Similarity=0.215 Sum_probs=6.0
Q ss_pred ceeeeeecCC
Q 003293 61 AKLHLVDLAG 70 (833)
Q Consensus 61 skL~lVDLAG 70 (833)
|.+.++|..|
T Consensus 123 ss~lv~n~~~ 132 (592)
T 1f5n_A 123 SSTFVYNSIG 132 (592)
T ss_dssp CSEEEEEEES
T ss_pred cCeEEEECCC
Confidence 4566777544
No 75
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=47.36 E-value=7.9e+02 Score=34.55 Aligned_cols=26 Identities=19% Similarity=0.166 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 329 KQHFGKKIAELEDEKRTVQKERDHLL 354 (833)
Q Consensus 329 kq~yekKi~eLE~ei~~LqkErdeLl 354 (833)
+.-|.+|..+++..+..++.=.++|.
T Consensus 1905 ~~ll~~K~~el~~~~~rl~~GL~KL~ 1930 (3245)
T 3vkg_A 1905 VLLINEKRDQLEEEQLHLNIGLKKLR 1930 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666666666555555555543
No 76
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=46.42 E-value=2.4e+02 Score=31.07 Aligned_cols=20 Identities=25% Similarity=0.385 Sum_probs=8.1
Q ss_pred HHHHHHhHHHHHHHHHHHHH
Q 003293 399 LLKQKQKSDEAAKRLQDEIQ 418 (833)
Q Consensus 399 llk~K~k~E~~ik~L~~EIq 418 (833)
|.+.+.+.+++++.|+.||.
T Consensus 434 ~~~~~~~~~~~~~~~~~~~~ 453 (471)
T 3mq9_A 434 LDAEKAQGQKKVEELEGEIT 453 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33333334444444444443
No 77
>3trt_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural protein; 2.30A {Homo sapiens} PDB: 3klt_A*
Probab=46.33 E-value=84 Score=26.08 Aligned_cols=16 Identities=25% Similarity=0.328 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHHHHHH
Q 003293 375 HAHKLKSLEAQILDLK 390 (833)
Q Consensus 375 ~ekkLqeLE~ei~~Lk 390 (833)
++..++.|+.+|..++
T Consensus 61 lrr~iq~L~~el~slk 76 (77)
T 3trt_A 61 YRRQVQSLTMEVDALK 76 (77)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhc
Confidence 4556666666665554
No 78
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=46.09 E-value=1.2e+02 Score=34.50 Aligned_cols=17 Identities=24% Similarity=0.341 Sum_probs=7.3
Q ss_pred HHHHhhhhHHHHHHHHH
Q 003293 452 LRKEGRRNEYERHKLQA 468 (833)
Q Consensus 452 LKke~rK~~~e~~kLe~ 468 (833)
|+.-.+....+|+|||.
T Consensus 136 LQsnLedq~~kIQRLEv 152 (562)
T 3ghg_A 136 LQKNVRAQLVDMKRLEV 152 (562)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33333334444555544
No 79
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=45.65 E-value=3e+02 Score=30.35 Aligned_cols=20 Identities=30% Similarity=0.504 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 003293 376 AHKLKSLEAQILDLKKKQEN 395 (833)
Q Consensus 376 ekkLqeLE~ei~~LkkK~~~ 395 (833)
.+|+++||.+|.+|..++.+
T Consensus 442 ~~~~~~~~~~~~~~~~~~~~ 461 (471)
T 3mq9_A 442 QKKVEELEGEITTLNHKLQD 461 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 35666777777666655443
No 80
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Probab=44.61 E-value=3.9e+02 Score=30.19 Aligned_cols=56 Identities=14% Similarity=0.164 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 326 AALKQHFGKKIAELEDEKRTVQKERDHLLTEIENLASNSDGQTQKLQDVHAHKLKSLEAQILDLKKK 392 (833)
Q Consensus 326 ~~lkq~yekKi~eLE~ei~~LqkErdeLl~eL~~~~~~~~~~~~KL~e~~ekkLqeLE~ei~~LkkK 392 (833)
+..+..|++++.+...+-..++.|...+...-. ..+..|+++|.+.+.++..-++.
T Consensus 26 a~aka~Ye~~~ae~~a~n~~i~aeNeaikkrNa-----------~aka~Ye~~l~kY~~dlakY~~~ 81 (497)
T 3iox_A 26 ADAKAAYEAAVAANNAANAALTAENTAIKKRNA-----------DAKADYEAKLAKYQADLAKYQKD 81 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 346788999999999988888888777653321 12345777777777777666543
No 81
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=44.59 E-value=3e+02 Score=30.05 Aligned_cols=28 Identities=25% Similarity=0.271 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 373 DVHAHKLKSLEAQILDLKKKQENQVQLL 400 (833)
Q Consensus 373 e~~ekkLqeLE~ei~~LkkK~~~q~~ll 400 (833)
..|-+-..+||.+|..|+++..+|...+
T Consensus 109 n~~~e~s~eLe~~i~~lk~~V~~q~~~i 136 (390)
T 1deq_A 109 NTFKQINEDLRSRIEILRRKVIEQVQRI 136 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 3466677889999999999888875533
No 82
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=43.28 E-value=1.6e+02 Score=26.65 Aligned_cols=51 Identities=25% Similarity=0.313 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 376 AHKLKSLEAQILDLKKKQENQVQLLKQKQKSDEAAKRLQDEIQFIKAQKVQLQHRIK 432 (833)
Q Consensus 376 ekkLqeLE~ei~~LkkK~~~q~~llk~K~k~E~~ik~L~~EIq~mK~qKv~L~kkmk 432 (833)
..+...|..++..++.|+... +...-..+..|+.||..++..+-.|...+|
T Consensus 9 ~~~~~~L~~E~e~~k~K~~~~------~~e~~~~~~~Lq~El~~lr~~~~~l~~~iR 59 (111)
T 2v66_B 9 QADNQRLKYEVEALKEKLEHQ------YAQSYKQVSVLEDDLSQTRAIKEQLHKYVR 59 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445555555555444432 223334455566666666665555555544
No 83
>3he5_A Synzip1; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=41.43 E-value=1e+02 Score=22.75 Aligned_cols=44 Identities=30% Similarity=0.425 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 336 IAELEDEKRTVQKERDHLLTEIENLASNSDGQTQKLQDVHAHKLKSLEAQILDLKKKQE 394 (833)
Q Consensus 336 i~eLE~ei~~LqkErdeLl~eL~~~~~~~~~~~~KL~e~~ekkLqeLE~ei~~LkkK~~ 394 (833)
+.+|++++..++.|-+.|... .-+...-+.-||.+|..|++|..
T Consensus 5 vaqlenevaslenenetlkkk---------------nlhkkdliaylekeianlrkkie 48 (49)
T 3he5_A 5 VAQLENEVASLENENETLKKK---------------NLHKKDLIAYLEKEIANLRKKIE 48 (49)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhhcccHHHHHh---------------cccHHHHHHHHHHHHHHHHHHhc
Confidence 456677777777666655321 00112334557888888887653
No 84
>1gk4_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, stutter; 2.3A {Homo sapiens} SCOP: h.1.20.1
Probab=40.91 E-value=1.7e+02 Score=24.90 Aligned_cols=40 Identities=18% Similarity=0.220 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHhHHHHHHHHH
Q 003293 375 HAHKLKSLEAQILDLKKK----QENQVQLLKQKQKSDEAAKRLQ 414 (833)
Q Consensus 375 ~ekkLqeLE~ei~~LkkK----~~~q~~llk~K~k~E~~ik~L~ 414 (833)
+...+..+|.++..++.. ..+...|+..|...|.+|..|+
T Consensus 31 ~q~~i~~lE~eL~~~r~e~~~q~~EYq~LlnvK~~Ld~EIatYR 74 (84)
T 1gk4_A 31 YQDTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYR 74 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 555666666666666532 2334555666666666555443
No 85
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=40.02 E-value=1.3e+02 Score=25.28 Aligned_cols=29 Identities=21% Similarity=0.423 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003293 332 FGKKIAELEDEKRTVQKERDHLLTEIENL 360 (833)
Q Consensus 332 yekKi~eLE~ei~~LqkErdeLl~eL~~~ 360 (833)
.+.+|..|++.+...+.+++.+..++..+
T Consensus 19 Le~~v~~le~~Le~s~~~q~~~~~Elk~~ 47 (72)
T 3cve_A 19 LEGQLSEMEQRLEKSQSEQDAFRSNLKTL 47 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34667777777777777776666666554
No 86
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=39.96 E-value=70 Score=26.78 Aligned_cols=40 Identities=25% Similarity=0.185 Sum_probs=25.4
Q ss_pred HHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 659 QLWEKDIEIKEMKEQLKELVGLLRQSEVRRKEVEEELKLR 698 (833)
Q Consensus 659 ~~~~~~~el~e~k~~~~~l~~~l~~~e~q~~~l~~~~~~~ 698 (833)
++..+.++|....+.+.++++.|.+-+...++|..++-.+
T Consensus 27 ~L~~K~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLDKf 66 (72)
T 3nmd_A 27 ALQEKIEELRQRDALIDELELELDQKDELIQMLQNELDKY 66 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444555666666666677777777777777776666444
No 87
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=38.68 E-value=1.4e+02 Score=25.48 Aligned_cols=24 Identities=21% Similarity=0.454 Sum_probs=11.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 369 QKLQDVHAHKLKSLEAQILDLKKKQ 393 (833)
Q Consensus 369 ~KL~e~~ekkLqeLE~ei~~LkkK~ 393 (833)
++|++ ++.+.++|+.++..|+++.
T Consensus 45 skL~e-ae~rn~eL~~e~~~l~~~~ 68 (81)
T 1wt6_A 45 SQLRE-AEARNRDLEAHVRQLQERM 68 (81)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 34443 4455555555555554433
No 88
>3mov_A Lamin-B1; LMNB1, B-type lamins, intermediate filament (IF), nucleus, coiled coil, structural genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} PDB: 3tyy_A
Probab=38.39 E-value=76 Score=27.92 Aligned_cols=39 Identities=18% Similarity=0.222 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhHHHHHHHH
Q 003293 375 HAHKLKSLEAQILDLKKKQ----ENQVQLLKQKQKSDEAAKRL 413 (833)
Q Consensus 375 ~ekkLqeLE~ei~~LkkK~----~~q~~llk~K~k~E~~ik~L 413 (833)
+...|..+|.++..++... .+...|+..|...+.+|..+
T Consensus 42 ~q~~i~~lE~eL~~~r~e~~~ql~EYq~LlnvKl~Le~EIatY 84 (95)
T 3mov_A 42 SRRMLTDKEREMAEIRDQMQQQLNDYEQLLDVKLALDMEISAY 84 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555666666666665322 23344555555555555544
No 89
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=38.07 E-value=1.3e+02 Score=27.50 Aligned_cols=24 Identities=21% Similarity=0.275 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 328 LKQHFGKKIAELEDEKRTVQKERD 351 (833)
Q Consensus 328 lkq~yekKi~eLE~ei~~LqkErd 351 (833)
.-.+|...|.+|+.++......++
T Consensus 41 ~v~ql~~~i~~Le~eL~e~r~~~q 64 (120)
T 3i00_A 41 VVLQLKGHVSELEADLAEQQHLRQ 64 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445666777777776666554433
No 90
>1x8y_A Lamin A/C; structural protein, intermediate filament protein; 2.20A {Homo sapiens} SCOP: h.1.20.1 PDB: 3v5b_A 3v4w_A 3v4q_A
Probab=37.82 E-value=1.1e+02 Score=26.34 Aligned_cols=40 Identities=15% Similarity=0.214 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHhHHHHHHHHH
Q 003293 375 HAHKLKSLEAQILDLKKK----QENQVQLLKQKQKSDEAAKRLQ 414 (833)
Q Consensus 375 ~ekkLqeLE~ei~~LkkK----~~~q~~llk~K~k~E~~ik~L~ 414 (833)
+...|..+|.++..++.. ..+...|+..|...|.+|..++
T Consensus 33 ~q~~i~~lE~el~~~r~e~~~ql~EYq~LlnvK~~Le~EIatYR 76 (86)
T 1x8y_A 33 SRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYR 76 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 444555555555555432 2233455555555555555443
No 91
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=37.14 E-value=1.9e+02 Score=24.36 Aligned_cols=19 Identities=32% Similarity=0.513 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 003293 376 AHKLKSLEAQILDLKKKQE 394 (833)
Q Consensus 376 ekkLqeLE~ei~~LkkK~~ 394 (833)
+.+....+.+|..|++|..
T Consensus 33 e~~~~~~E~ev~~L~kKiq 51 (81)
T 1ic2_A 33 EERSKQLEDELVALQKKLK 51 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHHHHHH
Confidence 3444555555555554433
No 92
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=36.36 E-value=2.2e+02 Score=25.01 Aligned_cols=61 Identities=18% Similarity=0.302 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-hh-------------hhhHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 332 FGKKIAELEDEKRTVQKERDHLLTEIENLASNS-DG-------------QTQKLQDVHAHKLKSLEAQILDLKKK 392 (833)
Q Consensus 332 yekKi~eLE~ei~~LqkErdeLl~eL~~~~~~~-~~-------------~~~KL~e~~ekkLqeLE~ei~~LkkK 392 (833)
+..++..+..++..++.+..++...+..+..-. +. ...........++..++..|..|.++
T Consensus 18 l~~~~~~l~~q~~~l~~~~~e~~~~~~eL~~l~~d~~vy~~iG~vfv~~~~~ea~~~L~~~~e~ie~~i~~le~~ 92 (117)
T 2zqm_A 18 YQQQLQLVVQQKQKVQLELTEAKKALDEIESLPDDAVVYKTVGTLIVKTTKDKAVAELKEKIETLEVRLNALERQ 92 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHhHHHhhHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566666666666666655544433332211 11 11234444555666666666555543
No 93
>4fi5_A Nucleoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.20A {Hantaan virus}
Probab=36.35 E-value=1.6e+02 Score=26.57 Aligned_cols=35 Identities=17% Similarity=0.248 Sum_probs=22.6
Q ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 364 SDGQTQKLQDVHAHKLKSLEAQILDLKKKQENQVQ 398 (833)
Q Consensus 364 ~~~~~~KL~e~~ekkLqeLE~ei~~LkkK~~~q~~ 398 (833)
.|+-.+..=..|+.-++.++.+|.+|++...+...
T Consensus 56 PDevNK~tl~~R~~~Vs~lq~KiaeLKrqLAd~va 90 (113)
T 4fi5_A 56 PDELNKRTLTDREGVAVSIQAKIDELKRQLADRIA 90 (113)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34433333344677788888888888877666544
No 94
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=36.12 E-value=2.2e+02 Score=24.92 Aligned_cols=51 Identities=16% Similarity=0.319 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 334 KKIAELEDEKRTVQKERDHLLTEIENLASNSDGQTQKLQDVHAHKLKSLEAQILDLKKK 392 (833)
Q Consensus 334 kKi~eLE~ei~~LqkErdeLl~eL~~~~~~~~~~~~KL~e~~ekkLqeLE~ei~~LkkK 392 (833)
..|..|..++..++.+.|.+...+... ..+|.+ .++.....|.++..|.++
T Consensus 44 ~ei~sL~kKiq~lE~eld~~~e~l~~a-------~~kLe~-~ek~~~~AE~evasLnRr 94 (101)
T 3u59_A 44 EEQQGLQKKLKGTEDEVEKYSESVKEA-------QEKLEQ-AEKKATDAEAEVASLNRR 94 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 444444444444444444444444322 122222 344555555555555544
No 95
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=35.74 E-value=63 Score=25.37 Aligned_cols=35 Identities=14% Similarity=0.299 Sum_probs=24.2
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003293 201 GSSSDEVQVLKERIAWLEAANEDLCRELHEYRSRC 235 (833)
Q Consensus 201 g~~s~~~~~Lkeki~~Le~ene~L~~EL~e~r~rl 235 (833)
++...++..|+.++..|..++..|..++.++..++
T Consensus 15 ~p~~~d~eaLk~E~~eLk~k~~~L~~~~~el~~~l 49 (53)
T 2yy0_A 15 TPENPEIELLRLELAEMKEKYEAIVEENKKLKAKL 49 (53)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55667777777777777777777777777666554
No 96
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=34.29 E-value=1.7e+02 Score=23.50 Aligned_cols=47 Identities=15% Similarity=0.212 Sum_probs=24.4
Q ss_pred HHHHHHHHHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 651 NSLADARCQLWEKDIEIKEMKEQLKELVGLLRQSEVRRKEVEEELKLREQAVAIT 705 (833)
Q Consensus 651 ~~~~~~r~~~~~~~~el~e~k~~~~~l~~~l~~~e~q~~~l~~~~~~~~~~~~~~ 705 (833)
|-+++.||- .-+..++.++...+ .+++.++.+|..++..++.++.+|
T Consensus 10 Nr~AA~R~R-~KKk~~~~~le~~~-------~~L~~~N~~L~~~i~~L~~E~~~L 56 (63)
T 1ci6_A 10 NKTAATRYR-QKKRAEQEALTGEC-------KELEKKNEALKERADSLAKEIQYL 56 (63)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHH-HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445666665 33333444444444 444455666666666666555554
No 97
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=34.27 E-value=2.5e+02 Score=24.86 Aligned_cols=55 Identities=20% Similarity=0.357 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 298 SMDKELNELNRRLEEKESEMKLVGGSDTAALKQHFGKKIAELEDEKRTVQKERDHLLTEI 357 (833)
Q Consensus 298 ~l~~EL~eLnkqLe~KE~e~k~~~~~~~~~lkq~yekKi~eLE~ei~~LqkErdeLl~eL 357 (833)
.++.++..|..++...+.++..+. .. -..-..+....|.+...++.|.++|-..|
T Consensus 9 ~lre~l~~le~~~~~~~~e~~~L~----~~-l~eE~~~R~~aE~~~~~ie~ElEeLTasL 63 (97)
T 2eqb_B 9 QLKEDYNTLKRELSDRDDEVKRLR----ED-IAKENELRTKAEEEADKLNKEVEDLTASL 63 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH----HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHH----HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666666666666665554433 00 11112333344555555555555554444
No 98
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=33.17 E-value=34 Score=39.78 Aligned_cols=28 Identities=25% Similarity=0.283 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 332 FGKKIAELEDEKRTVQKERDHLLTEIEN 359 (833)
Q Consensus 332 yekKi~eLE~ei~~LqkErdeLl~eL~~ 359 (833)
-+++..+|+..+..++.|-.....+|..
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 360 (575)
T 2i1j_A 333 AEKKQQEYQDRLRQMQEEMERSQANLLE 360 (575)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444555555555555444444443
No 99
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=32.05 E-value=2.6e+02 Score=24.47 Aligned_cols=23 Identities=17% Similarity=0.316 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 003293 334 KKIAELEDEKRTVQKERDHLLTE 356 (833)
Q Consensus 334 kKi~eLE~ei~~LqkErdeLl~e 356 (833)
.+...++.+++.++.....+..+
T Consensus 23 d~ae~~e~~~k~~e~~~~~~E~e 45 (101)
T 3u59_A 23 DRAEQAEADKKQAEDRCKQLEEE 45 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHH
Confidence 44444444444444444444333
No 100
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=32.03 E-value=3.4e+02 Score=25.85 Aligned_cols=113 Identities=12% Similarity=0.064 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 370 KLQDVHAHKLKSLEAQILDLKKKQENQVQLLKQKQKSDEAAKRLQDEIQFIKAQKVQLQHRIKQEAEQFRQWKASREKEL 449 (833)
Q Consensus 370 KL~e~~ekkLqeLE~ei~~LkkK~~~q~~llk~K~k~E~~ik~L~~EIq~mK~qKv~L~kkmkeE~ek~r~~k~~~eKEi 449 (833)
+.+...+.++.+|..+...+.-.. +...-......+..|+.|+..++..-.+|-..+++...-... ..-|+
T Consensus 35 ~~Rd~~E~~~~~l~~e~~~~~~~~-----~vs~~~~~~~~I~~L~~El~~l~~ki~dLeeel~eK~K~~e~----l~DEl 105 (152)
T 3a7p_A 35 TDRNDKEAHLNELFQDNSGAIGGN-----IVSHDDALLNTLAILQKELKSKEQEIRRLKEVIALKNKNTER----LNAAL 105 (152)
T ss_dssp ----------------------CH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHH
T ss_pred HHhhhHHHHHHHHHHhhccCCCcc-----cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHH
Q ss_pred HHHHHHhhhhHHHHHHHHHHH-HHHHhHhhhhhHHHHHHHHHH
Q 003293 450 LQLRKEGRRNEYERHKLQALN-QRQKLVLQRKTEEAAMATKRL 491 (833)
Q Consensus 450 ~qLKke~rK~~~e~~kLe~~~-~kQ~~VLkRKtEEa~aa~kRL 491 (833)
..|.-+.--.+..+.+|+..+ ..=...+++|..||...|.++
T Consensus 106 ~aLqlq~n~lE~kl~kLq~EN~~LV~RWM~rk~qEAe~MN~an 148 (152)
T 3a7p_A 106 ISGTIENNVLQQKLSDLKKEHSQLVARWLKKTEKETEAMNSEI 148 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
No 101
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=30.96 E-value=2.8e+02 Score=25.40 Aligned_cols=44 Identities=18% Similarity=0.262 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHHhccCchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 003293 343 KRTVQKERDHLLTEIENLASNSDGQTQKLQDVHAHKLKSLEAQILDLK 390 (833)
Q Consensus 343 i~~LqkErdeLl~eL~~~~~~~~~~~~KL~e~~ekkLqeLE~ei~~Lk 390 (833)
|..|..|.+.|..+++.+. ...+..-.+++.++.+||.++..-+
T Consensus 17 Ie~Lkreie~lk~ele~l~----~E~q~~v~ql~~~i~~Le~eL~e~r 60 (120)
T 3i00_A 17 IERLYREISGLKAQLENMK----TESQRVVLQLKGHVSELEADLAEQQ 60 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555555555554431 1123333445666666666666554
No 102
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=29.25 E-value=1.1e+02 Score=25.96 Aligned_cols=29 Identities=14% Similarity=0.289 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003293 332 FGKKIAELEDEKRTVQKERDHLLTEIENL 360 (833)
Q Consensus 332 yekKi~eLE~ei~~LqkErdeLl~eL~~~ 360 (833)
.+.+|..|+..+...+.+++.+..++..+
T Consensus 25 Le~~v~~le~~Le~s~~~q~~~~~Elk~l 53 (79)
T 3cvf_A 25 LEHQLRAMERSLEEARAERERARAEVGRA 53 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566666666666666666665555444
No 103
>2ic9_A Nucleocapsid protein; hantavirus, bunyaviridae, ssRNA negative- strand viruses, antiparallel coiled coil, viral protein; 2.00A {Sin nombre virus}
Probab=28.74 E-value=3e+02 Score=24.20 Aligned_cols=35 Identities=14% Similarity=0.272 Sum_probs=21.8
Q ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 364 SDGQTQKLQDVHAHKLKSLEAQILDLKKKQENQVQ 398 (833)
Q Consensus 364 ~~~~~~KL~e~~ekkLqeLE~ei~~LkkK~~~q~~ 398 (833)
.|+-.+..=..|..-++.|+.+|.+|++...+...
T Consensus 39 PDevNk~~~~~R~~~V~~lq~Ki~elkr~lAd~v~ 73 (96)
T 2ic9_A 39 PDDVNKSTLQSRRAAVSALETKLGELKRELADLIA 73 (96)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34433333344667788888888888876665443
No 104
>2ic6_A Nucleocapsid protein; hantavirus, bunyaviridae, ssRNA negative- strand viruses, antiparallel coiled coil, viral protein; 1.15A {Sin nombre virus}
Probab=28.62 E-value=2.7e+02 Score=23.61 Aligned_cols=61 Identities=11% Similarity=0.215 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH----hccCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 336 IAELEDEKRTVQKERDHLLTEIEN----LASNSDGQTQKLQDVHAHKLKSLEAQILDLKKKQENQ 396 (833)
Q Consensus 336 i~eLE~ei~~LqkErdeLl~eL~~----~~~~~~~~~~KL~e~~ekkLqeLE~ei~~LkkK~~~q 396 (833)
|.+|+.++...+.+.......|.. .....|+-.+..=..|+--++.++.+|.+|++...+.
T Consensus 7 l~eLq~e~~~~E~QL~~A~QKLkdA~~~~e~DPDevNK~~~~~R~~~V~~lq~Ki~elkrqlAd~ 71 (78)
T 2ic6_A 7 LKEVQDNITLHEQRLVTTRQKLKDAERAVELDPDDVNKSTLQSRRAAVSALETKLGELKRELADL 71 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555555444444333333222 2223444333333446677788888888888665543
No 105
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=27.99 E-value=2.9e+02 Score=23.81 Aligned_cols=24 Identities=13% Similarity=0.207 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 332 FGKKIAELEDEKRTVQKERDHLLT 355 (833)
Q Consensus 332 yekKi~eLE~ei~~LqkErdeLl~ 355 (833)
+..++..+..++..++.+..++..
T Consensus 13 lq~~~~~l~~q~~~l~~~~~e~~~ 36 (107)
T 1fxk_A 13 LQQQAQAISVQKQTVEMQINETQK 36 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 335555555666666665555544
No 106
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=26.82 E-value=1.9e+02 Score=24.04 Aligned_cols=44 Identities=14% Similarity=0.243 Sum_probs=31.2
Q ss_pred HhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 660 LWEKDIEIKEMKEQLKELVGLLRQSEVRRKEVEEELKLREQAVA 703 (833)
Q Consensus 660 ~~~~~~el~e~k~~~~~l~~~l~~~e~q~~~l~~~~~~~~~~~~ 703 (833)
-.-++..|++|+.++..++.....+...++.|..++..+..++.
T Consensus 24 ReRK~~~i~~LE~~v~~le~~~~~l~~en~~Lr~~i~~L~~El~ 67 (70)
T 1gd2_E 24 RKRKEDHLKALETQVVTLKELHSSTTLENDQLRQKVRQLEEELR 67 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34577788888888888877666666666667766666666654
No 107
>1gk4_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, stutter; 2.3A {Homo sapiens} SCOP: h.1.20.1
Probab=25.58 E-value=3.1e+02 Score=23.22 Aligned_cols=49 Identities=18% Similarity=0.246 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 003293 416 EIQFIKAQKVQLQHRIKQEAEQFRQWKASREKELLQLRKEGRRNEYERH 464 (833)
Q Consensus 416 EIq~mK~qKv~L~kkmkeE~ek~r~~k~~~eKEi~qLKke~rK~~~e~~ 464 (833)
||+.++.++..|...+.+-..++...-......|..|..+..+...+|.
T Consensus 2 el~~l~~~~~sLE~~l~e~e~~~~~~~~~~q~~i~~lE~eL~~~r~e~~ 50 (84)
T 1gk4_A 2 EVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMA 50 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5666777777777777766666665555555555555555554444443
No 108
>1ik9_A DNA repair protein XRCC4; DNA END joining, double-strand break repair, V(D)J recombination, protein-protein complex, coiled coil; HET: DNA; 2.30A {Homo sapiens} SCOP: b.59.1.1 h.1.11.1 PDB: 3ii6_A* 1fu1_A* 3rwr_A*
Probab=24.55 E-value=3.5e+02 Score=27.09 Aligned_cols=26 Identities=15% Similarity=0.283 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003293 335 KIAELEDEKRTVQKERDHLLTEIENL 360 (833)
Q Consensus 335 Ki~eLE~ei~~LqkErdeLl~eL~~~ 360 (833)
++..|..+...++.+.++|..+++..
T Consensus 140 ~~~~L~~e~~~l~~~~~~l~~qlE~~ 165 (213)
T 1ik9_A 140 KNEHLQKENERLLRDWNDVQGRFEKA 165 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444444555555555554443
No 109
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=24.43 E-value=2.3e+02 Score=24.39 Aligned_cols=13 Identities=15% Similarity=0.207 Sum_probs=4.7
Q ss_pred HHHHHHHHHHHHH
Q 003293 407 DEAAKRLQDEIQF 419 (833)
Q Consensus 407 E~~ik~L~~EIq~ 419 (833)
+.++.....+|..
T Consensus 50 ~~el~~h~~ei~~ 62 (84)
T 1gmj_A 50 ENEISHHAKEIER 62 (84)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3333333333333
No 110
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=23.26 E-value=2e+02 Score=23.86 Aligned_cols=23 Identities=30% Similarity=0.488 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 003293 370 KLQDVHAHKLKSLEAQILDLKKK 392 (833)
Q Consensus 370 KL~e~~ekkLqeLE~ei~~LkkK 392 (833)
...+..+..+++||.++.+|...
T Consensus 22 afReRK~~~i~~LE~~v~~le~~ 44 (70)
T 1gd2_E 22 AFRKRKEDHLKALETQVVTLKEL 44 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566678888888888888753
No 111
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=23.01 E-value=3.8e+02 Score=23.37 Aligned_cols=92 Identities=18% Similarity=0.308 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhHHHHHHHHHHH
Q 003293 301 KELNELNRRLEEKESEMKLVGGSDTAALKQHFGKKIAELEDEKRTVQKERDHLLTEIENLASNSDGQTQKLQDVHAHKLK 380 (833)
Q Consensus 301 ~EL~eLnkqLe~KE~e~k~~~~~~~~~lkq~yekKi~eLE~ei~~LqkErdeLl~eL~~~~~~~~~~~~KL~e~~ekkLq 380 (833)
.+...+...|...+.+-..+. ..+..|+.+...+..++..+..+...+.......-+.... +...+-
T Consensus 4 ~~~~~l~~eL~~l~~eE~~L~------------~eL~~lEke~~~l~~el~~le~E~~~L~~eE~~~w~eyn~-~~~ql~ 70 (96)
T 3q8t_A 4 SDSEQLQRELKELALEEERLI------------QELEDVEKNRKVVAENLEKVQAEAERLDQEEAQYQREYSE-FKRQQL 70 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHH------------HHHHHHHHhHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH-HHHHHH
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHh
Q 003293 381 SLEAQILDLKKKQEN-QVQLLKQKQK 405 (833)
Q Consensus 381 eLE~ei~~LkkK~~~-q~~llk~K~k 405 (833)
+++.++..+..++.- +..|-+++.+
T Consensus 71 e~~dE~~Sl~~q~~~~~~qLdkL~K~ 96 (96)
T 3q8t_A 71 ELDDELKSVENQMRYAQMQLDKLKKK 96 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcC
No 112
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=22.52 E-value=1.8e+02 Score=23.02 Aligned_cols=31 Identities=16% Similarity=0.123 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 675 KELVGLLRQSEVRRKEVEEELKLREQAVAIT 705 (833)
Q Consensus 675 ~~l~~~l~~~e~q~~~l~~~~~~~~~~~~~~ 705 (833)
..|+..+..++..+.+|..++..+.++++.|
T Consensus 25 ~~Le~~~~~L~~~n~~L~~~i~~L~~e~~~L 55 (61)
T 1t2k_D 25 QSLEKKAEDLSSLNGQLQSEVTLLRNEVAQL 55 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444566666666666666666554
No 113
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=21.63 E-value=4e+02 Score=23.20 Aligned_cols=81 Identities=20% Similarity=0.135 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhhc-CCCCCCCCCcccccccCChhhHHHHHHHHHHHHhhchHHHHHHH
Q 003293 536 NVHEVRFDYEKQSQVRAALAEELAVLKQVDEFASK-GLSPPRGKNGFARVSSMSPNARMARISSLENMLSISSNSLVAMA 614 (833)
Q Consensus 536 ~~~e~~~~le~l~~~R~~L~~el~~Lk~~~e~~~~-~~~~~~~~~~~~~~~~~~~~~~~aqI~~Le~~~~~~~~~l~~l~ 614 (833)
...+++..+..+...+..+..++..++........ +.+=| -+...+.+..+...|..++..+......|..+.
T Consensus 11 ~~~~~~~~l~~L~~~~~~l~~~i~~l~~~l~~l~~~g~~CP------vCgs~l~~~~~~~~i~~~~~~l~~l~~~i~~l~ 84 (112)
T 1l8d_A 11 KKTTIEEERNEITQRIGELKNKIGDLKTAIEELKKAKGKCP------VCGRELTDEHREELLSKYHLDLNNSKNTLAKLI 84 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECT------TTCCEECHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC------CCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHhHHHhh
Q 003293 615 SQLSEAEE 622 (833)
Q Consensus 615 ~kl~e~ee 622 (833)
.++.+.+.
T Consensus 85 ~~i~~l~~ 92 (112)
T 1l8d_A 85 DRKSELER 92 (112)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
No 114
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=21.43 E-value=3.8e+02 Score=22.84 Aligned_cols=50 Identities=12% Similarity=0.134 Sum_probs=24.1
Q ss_pred HHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003293 658 CQLWEKDIEIKEMKEQLKELVGLLRQSEVRRKEVEEELKLREQAVAITLA 707 (833)
Q Consensus 658 ~~~~~~~~el~e~k~~~~~l~~~l~~~e~q~~~l~~~~~~~~~~~~~~l~ 707 (833)
....++..+|.+++..+..|-+.+.+..-+...|...++.+-..+--.|+
T Consensus 20 q~~~~Lq~Ql~~Lq~Ev~~LRGqiE~~~~~l~ql~~rQrd~Y~dLD~Rl~ 69 (83)
T 2xdj_A 20 QLLTQLQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQKQILLQIDSLSS 69 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34455555555555555555555555445555554444444444433333
No 115
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A
Probab=21.06 E-value=1.4e+02 Score=23.90 Aligned_cols=33 Identities=12% Similarity=0.197 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 673 QLKELVGLLRQSEVRRKEVEEELKLREQAVAIT 705 (833)
Q Consensus 673 ~~~~l~~~l~~~e~q~~~l~~~~~~~~~~~~~~ 705 (833)
.+.+|+..+..++.++..|..++..+.++++.|
T Consensus 23 ~~~~Le~~v~~L~~~n~~L~~~v~~L~~e~~~L 55 (62)
T 1jnm_A 23 RIARLEEKVKTLKAQNSELASTANMLREQVAQL 55 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555555677777777777777776543
No 116
>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A
Probab=21.04 E-value=3.9e+02 Score=22.82 Aligned_cols=74 Identities=19% Similarity=0.324 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhHHHHHHHHHH
Q 003293 300 DKELNELNRRLEEKESEMKLVGGSDTAALKQHFGKKIAELEDEKRTVQKERDHLLTEIENLASNSDGQTQKLQDVHAHKL 379 (833)
Q Consensus 300 ~~EL~eLnkqLe~KE~e~k~~~~~~~~~lkq~yekKi~eLE~ei~~LqkErdeLl~eL~~~~~~~~~~~~KL~e~~ekkL 379 (833)
..++..+..++......+.... ....+|+.....+..++..|..++..+ ....+....+-
T Consensus 13 eeEm~~~eeel~~lke~l~k~e------------~~rkele~~~~~l~~ek~~L~~ql~ea--------Ee~~~~L~~~K 72 (89)
T 3bas_A 13 EEEMKEQLKQMDKMKEDLAKTE------------RIKKELEEQNVTLLEQKNDLFGSMKQL--------EDKVEELLSKN 72 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHhH--------HHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHH
Q 003293 380 KSLEAQILDLKKKQ 393 (833)
Q Consensus 380 qeLE~ei~~LkkK~ 393 (833)
.+|+.+|.++....
T Consensus 73 ~eLE~~l~el~~rl 86 (89)
T 3bas_A 73 YHLENEVARLKKLV 86 (89)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
No 117
>2w83_C C-JUN-amino-terminal kinase-interacting protein 4; golgi apparatus, protein transport, ER-golgi transport, ARF, GTPase, effector, myristate; HET: GTP; 1.93A {Homo sapiens}
Probab=20.82 E-value=3.3e+02 Score=22.95 Aligned_cols=47 Identities=23% Similarity=0.230 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhHHHHHHHHHHHHHHHHHHH
Q 003293 327 ALKQHFGKKIAELEDEKRTVQKERDHLLTEIENLASNSDGQTQKLQDVHAHKLKSLEAQILD 388 (833)
Q Consensus 327 ~lkq~yekKi~eLE~ei~~LqkErdeLl~eL~~~~~~~~~~~~KL~e~~ekkLqeLE~ei~~ 388 (833)
..+...=.++.+|-.+...+..|...+.. .+...+.|+.++|.++..
T Consensus 30 vvk~DLI~rvdELt~E~e~l~~El~s~~~---------------~~~r~~~ri~elEeElkr 76 (77)
T 2w83_C 30 IVKNDLIAKVDELTCEKDVLQGELEAVKQ---------------AKLKLEEKNRELEEELRK 76 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHC---------
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHhc
Confidence 34444445666666655555554444322 223356677777776653
No 118
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=20.77 E-value=4.7e+02 Score=23.59 Aligned_cols=73 Identities=15% Similarity=0.361 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 377 HKLKSLEAQILDLKKKQENQVQLLKQKQKSDEAAKRLQDEIQFIKAQKVQLQHRIKQEAEQFRQWKASREKELLQL 452 (833)
Q Consensus 377 kkLqeLE~ei~~LkkK~~~q~~llk~K~k~E~~ik~L~~EIq~mK~qKv~L~kkmkeE~ek~r~~k~~~eKEi~qL 452 (833)
-.+.-+...+.+++.|+.+. +..+..-|..+..|+..+...--.++.|..++..=.+...-.|..-+.||..|
T Consensus 41 leldn~~~~~edfk~KyE~E---~~~r~~~E~di~~lrK~lD~~~l~r~dLE~~iesL~eEl~FLKk~heeEl~eL 113 (119)
T 3ol1_A 41 VERDNLAEDIMRLREKLQEE---MLQREEAENTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHEEEIQEL 113 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhHHH---HHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555556666665543 22334445555555555555555666666665444444444444444444443
No 119
>2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=20.70 E-value=1.7e+02 Score=27.47 Aligned_cols=117 Identities=19% Similarity=0.123 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHH
Q 003293 379 LKSLEAQILDLKKKQENQVQLLKQKQKSDEAAKRLQDEIQFIKAQKVQLQHRIKQEAEQFRQWKASREK---ELLQLRKE 455 (833)
Q Consensus 379 LqeLE~ei~~LkkK~~~q~~llk~K~k~E~~ik~L~~EIq~mK~qKv~L~kkmkeE~ek~r~~k~~~eK---Ei~qLKke 455 (833)
+..||.++...++....+....+.-.....+...|..++........+|...+.++..+-......+.+ |+-.|--.
T Consensus 3 ~s~LEd~L~~~r~~l~~~~~~~~~le~l~~~l~~l~~~l~~~~~e~~~L~~~l~eE~~~R~~aE~~~~~ie~ElE~LTas 82 (135)
T 2e7s_A 3 LGSLEEQLNKSLKTIASQKAAIENYNQLKEDYNTLKRELSDRDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDLTAS 82 (135)
T ss_dssp ---CCSTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHTHHHHHHHTTSHHHHHHHTTHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred hhhhHHHHHHHHHHH----HHHHhHhhhhhHHHHHHHHHHHHHH
Q 003293 456 GRRNEYERHKLQALN----QRQKLVLQRKTEEAAMATKRLKELL 495 (833)
Q Consensus 456 ~rK~~~e~~kLe~~~----~kQ~~VLkRKtEEa~aa~kRLK~~l 495 (833)
.=-..+.|+.-.... +.....|++...+.......+.+.|
T Consensus 83 LFeEAN~MVa~ar~~~~~~e~r~~~L~~ql~e~e~ll~~lq~QL 126 (135)
T 2e7s_A 83 LFDEANNLVADARMEKYAIEILNKRLTEQLREKDMLLDTLTLQL 126 (135)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHHHHHHHTTTHHHHCC-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 120
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=20.51 E-value=3.9e+02 Score=22.62 Aligned_cols=22 Identities=23% Similarity=0.282 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 003293 370 KLQDVHAHKLKSLEAQILDLKK 391 (833)
Q Consensus 370 KL~e~~ekkLqeLE~ei~~Lkk 391 (833)
||+...+..+.+...+|..|++
T Consensus 11 KLRrrl~E~~~q~qaEl~sLrr 32 (78)
T 3iv1_A 11 KLRWRMKEEMDRAQAELNALKR 32 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHH
Confidence 3444444455556666666654
Done!