BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003296
(833 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 138/415 (33%), Positives = 194/415 (46%), Gaps = 37/415 (8%)
Query: 6 GIDGLKLLNFSKNELVSLPTFNGFAGLEVLDFSSNNLNGNINLQFDELVXXXXXXXXXXX 65
G LK L S N++ + LE LD SSNN + I
Sbjct: 173 GCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF----------------- 215
Query: 66 XXGFLPINLGKTKALEELVLSGNAFHGEIPKGIADYRNLTLIDLSANNLSGSVPDRIGEL 125
LG AL+ L +SGN G+ + I+ L L+++S+N G +P L
Sbjct: 216 --------LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PL 265
Query: 126 SKLEVLILSANNLDGRLPTSLA-SITTLSRFAANQNKFSGSVPG--GITRFLRNLDLSYN 182
L+ L L+ N G +P L+ + TL+ + N F G+VP G L +L LS N
Sbjct: 266 KSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSN 325
Query: 183 KLLGVIPID-LLSHPNLQTIDLSVNMLEGSLPQ---NMSPNLVRLRLGTNLLIGEI-PSA 237
G +P+D LL L+ +DLS N G LP+ N+S +L+ L L +N G I P+
Sbjct: 326 NFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNL 385
Query: 238 TFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNGSLPIQLGSLGILQVMN 297
L L L NN FTG IP L +C L L+L+ N L+G++P LGSL L+ +
Sbjct: 386 CQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLK 445
Query: 298 LQLNKLSGEIPSQFSQLKLLSTMNISWNSLSGSIPSFXXXXXXXXXXXXXXXXXXGSIPN 357
L LN L GEIP + +K L T+ + +N L+G IPS G IP
Sbjct: 446 LWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPK 505
Query: 358 SITNMRSLIELQLGGNQLSGTIP--MMPPRLQIALNLSSNLFEGPIPTTFARLNG 410
I + +L L+L N SG IP + R I L+L++NLF G IP + +G
Sbjct: 506 WIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSG 560
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 137/437 (31%), Positives = 201/437 (45%), Gaps = 37/437 (8%)
Query: 1 MQSCGGIDGLKLLNFSKNELVSLPTFNG---FAGLEVLDFSSNNLNGNINLQFDELVXXX 57
+ S G GLK LN S N L +G LEVLD S+N+++G
Sbjct: 116 LTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISG------------- 162
Query: 58 XXXXXXXXXXGFLPINLGKTKALEELVLSGNAFHGEIPKGIADYRNLTLIDLSANNLSGS 117
L G+ L+ L +SGN G++ ++ NL +D+S+NN S
Sbjct: 163 -----ANVVGWVLSDGCGE---LKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTG 212
Query: 118 VPDRIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQNKFSGSVPGGITRFLRNL 177
+P +G+ S L+ L +S N L G ++++ T L + N+F G +P + L+ L
Sbjct: 213 IP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYL 271
Query: 178 DLSYNKLLGVIPIDLLSHP--NLQTIDLSVNMLEGSLPQ--NMSPNLVRLRLGTNLLIGE 233
L+ NK G IP D LS L +DLS N G++P L L L +N GE
Sbjct: 272 SLAENKFTGEIP-DFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGE 330
Query: 234 IPSATFTSLEKLTYLELDNNSFTGMIPQQLGS-CRSLTLLNLAQNELNGSLPIQLGS--L 290
+P T + L L+L N F+G +P+ L + SL L+L+ N +G + L
Sbjct: 331 LPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPK 390
Query: 291 GILQVMNLQLNKLSGEIPSQFSQLKLLSTMNISWNSLSGSIPSFXXXXXXXXXXXXXXXX 350
LQ + LQ N +G+IP S L ++++S+N LSG+IPS
Sbjct: 391 NTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNM 450
Query: 351 XXGSIPNSITNMRSLIELQLGGNQLSGTIPMMPPRLQI--ALNLSSNLFEGPIPTTFARL 408
G IP + +++L L L N L+G IP ++LS+N G IP RL
Sbjct: 451 LEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRL 510
Query: 409 NGLEVLDLSNNRFSGEI 425
L +L LSNN FSG I
Sbjct: 511 ENLAILKLSNNSFSGNI 527
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 157/312 (50%), Gaps = 5/312 (1%)
Query: 24 PTFNGFAGLEVLDFSSNNLNGNINLQFDELVXXXXXXXXXXXXXGFLPINLGKTKALEEL 83
PT + + L L S N L+G I L G +P L K LE L
Sbjct: 409 PTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETL 468
Query: 84 VLSGNAFHGEIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLDGRLP 143
+L N GEIP G+++ NL I LS N L+G +P IG L L +L LS N+ G +P
Sbjct: 469 ILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIP 528
Query: 144 TSLASITTLSRFAANQNKFSGSVPGGITRFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDL 203
L +L N N F+G++P + F ++ ++ N + G + + + +
Sbjct: 529 AELGDCRSLIWLDLNTNLFNGTIPAAM--FKQSGKIAANFIAGKRYVYIKNDGMKKECHG 586
Query: 204 SVNMLEGSLPQNMSPNLVRLRLGTNL---LIGEIPSATFTSLEKLTYLELDNNSFTGMIP 260
+ N+LE ++ N + R N+ + G S TF + + +L++ N +G IP
Sbjct: 587 AGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIP 646
Query: 261 QQLGSCRSLTLLNLAQNELNGSLPIQLGSLGILQVMNLQLNKLSGEIPSQFSQLKLLSTM 320
+++GS L +LNL N+++GS+P ++G L L +++L NKL G IP S L +L+ +
Sbjct: 647 KEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEI 706
Query: 321 NISWNSLSGSIP 332
++S N+LSG IP
Sbjct: 707 DLSNNNLSGPIP 718
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 146/492 (29%), Positives = 209/492 (42%), Gaps = 60/492 (12%)
Query: 10 LKLLNFSKNELVS----LP---------TFNGFAG------------LEVLDFSSNNLNG 44
LKLLN S N+ V LP N F G L LD S N+ G
Sbjct: 246 LKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYG 305
Query: 45 NINLQFDELVXXXXXXXXXXXXXGFLPIN-LGKTKALEELVLSGNAFHGEIPKGIADYR- 102
+ F G LP++ L K + L+ L LS N F GE+P+ + +
Sbjct: 306 AVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSA 365
Query: 103 NLTLIDLSANNLSGSVPDRIGELSK--LEVLILSANNLDGRLPTSLASITTLSRFAANQN 160
+L +DLS+NN SG + + + K L+ L L N G++P +L++ + L + N
Sbjct: 366 SLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFN 425
Query: 161 KFSGSVPGGITRF--LRNLDLSYNKLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMS- 217
SG++P + LR+L L N L G IP +L+ L+T+ L N L G +P +S
Sbjct: 426 YLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSN 485
Query: 218 -PNLVRLRLGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQ 276
NL + L N L GEIP LE L L+L NNSF+G IP +LG CRSL L+L
Sbjct: 486 CTNLNWISLSNNRLTGEIPKW-IGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNT 544
Query: 277 NELNGSLPI----QLGSLGI-----LQVMNLQLNKLSGEIPSQFSQLKLLSTMNISWNSL 327
N NG++P Q G + + + ++ + + E + L+ + N L
Sbjct: 545 NLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRL 604
Query: 328 SGSIPSFXXXXXXXXXXXXXXXXXXGSIPNSITNMRSLIELQLGGNQLSGTIPM----MP 383
S P G + N S++ L + N LSG IP MP
Sbjct: 605 STRNPC-----------NITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMP 653
Query: 384 PRLQIALNLSSNLFEGPIPTTFARLNGLEVLDLSNNRFSGEIXXXXXXXXXXXXXXXXXX 443
LNL N G IP L GL +LDLS+N+ G I
Sbjct: 654 --YLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNN 711
Query: 444 XXSGVVPKFSKW 455
SG +P+ ++
Sbjct: 712 NLSGPIPEMGQF 723
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 138/415 (33%), Positives = 194/415 (46%), Gaps = 37/415 (8%)
Query: 6 GIDGLKLLNFSKNELVSLPTFNGFAGLEVLDFSSNNLNGNINLQFDELVXXXXXXXXXXX 65
G LK L S N++ + LE LD SSNN + I
Sbjct: 176 GCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF----------------- 218
Query: 66 XXGFLPINLGKTKALEELVLSGNAFHGEIPKGIADYRNLTLIDLSANNLSGSVPDRIGEL 125
LG AL+ L +SGN G+ + I+ L L+++S+N G +P L
Sbjct: 219 --------LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PL 268
Query: 126 SKLEVLILSANNLDGRLPTSLA-SITTLSRFAANQNKFSGSVPG--GITRFLRNLDLSYN 182
L+ L L+ N G +P L+ + TL+ + N F G+VP G L +L LS N
Sbjct: 269 KSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSN 328
Query: 183 KLLGVIPID-LLSHPNLQTIDLSVNMLEGSLPQ---NMSPNLVRLRLGTNLLIGEI-PSA 237
G +P+D LL L+ +DLS N G LP+ N+S +L+ L L +N G I P+
Sbjct: 329 NFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNL 388
Query: 238 TFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNGSLPIQLGSLGILQVMN 297
L L L NN FTG IP L +C L L+L+ N L+G++P LGSL L+ +
Sbjct: 389 CQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLK 448
Query: 298 LQLNKLSGEIPSQFSQLKLLSTMNISWNSLSGSIPSFXXXXXXXXXXXXXXXXXXGSIPN 357
L LN L GEIP + +K L T+ + +N L+G IPS G IP
Sbjct: 449 LWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPK 508
Query: 358 SITNMRSLIELQLGGNQLSGTIP--MMPPRLQIALNLSSNLFEGPIPTTFARLNG 410
I + +L L+L N SG IP + R I L+L++NLF G IP + +G
Sbjct: 509 WIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSG 563
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 157/312 (50%), Gaps = 5/312 (1%)
Query: 24 PTFNGFAGLEVLDFSSNNLNGNINLQFDELVXXXXXXXXXXXXXGFLPINLGKTKALEEL 83
PT + + L L S N L+G I L G +P L K LE L
Sbjct: 412 PTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETL 471
Query: 84 VLSGNAFHGEIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLDGRLP 143
+L N GEIP G+++ NL I LS N L+G +P IG L L +L LS N+ G +P
Sbjct: 472 ILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIP 531
Query: 144 TSLASITTLSRFAANQNKFSGSVPGGITRFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDL 203
L +L N N F+G++P + F ++ ++ N + G + + + +
Sbjct: 532 AELGDCRSLIWLDLNTNLFNGTIPAAM--FKQSGKIAANFIAGKRYVYIKNDGMKKECHG 589
Query: 204 SVNMLEGSLPQNMSPNLVRLRLGTNL---LIGEIPSATFTSLEKLTYLELDNNSFTGMIP 260
+ N+LE ++ N + R N+ + G S TF + + +L++ N +G IP
Sbjct: 590 AGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIP 649
Query: 261 QQLGSCRSLTLLNLAQNELNGSLPIQLGSLGILQVMNLQLNKLSGEIPSQFSQLKLLSTM 320
+++GS L +LNL N+++GS+P ++G L L +++L NKL G IP S L +L+ +
Sbjct: 650 KEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEI 709
Query: 321 NISWNSLSGSIP 332
++S N+LSG IP
Sbjct: 710 DLSNNNLSGPIP 721
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 146/492 (29%), Positives = 209/492 (42%), Gaps = 60/492 (12%)
Query: 10 LKLLNFSKNELVS----LP---------TFNGFAG------------LEVLDFSSNNLNG 44
LKLLN S N+ V LP N F G L LD S N+ G
Sbjct: 249 LKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYG 308
Query: 45 NINLQFDELVXXXXXXXXXXXXXGFLPIN-LGKTKALEELVLSGNAFHGEIPKGIADYR- 102
+ F G LP++ L K + L+ L LS N F GE+P+ + +
Sbjct: 309 AVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSA 368
Query: 103 NLTLIDLSANNLSGSVPDRIGELSK--LEVLILSANNLDGRLPTSLASITTLSRFAANQN 160
+L +DLS+NN SG + + + K L+ L L N G++P +L++ + L + N
Sbjct: 369 SLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFN 428
Query: 161 KFSGSVPGGITRF--LRNLDLSYNKLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMS- 217
SG++P + LR+L L N L G IP +L+ L+T+ L N L G +P +S
Sbjct: 429 YLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSN 488
Query: 218 -PNLVRLRLGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQ 276
NL + L N L GEIP LE L L+L NNSF+G IP +LG CRSL L+L
Sbjct: 489 CTNLNWISLSNNRLTGEIPKW-IGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNT 547
Query: 277 NELNGSLPI----QLGSLGI-----LQVMNLQLNKLSGEIPSQFSQLKLLSTMNISWNSL 327
N NG++P Q G + + + ++ + + E + L+ + N L
Sbjct: 548 NLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRL 607
Query: 328 SGSIPSFXXXXXXXXXXXXXXXXXXGSIPNSITNMRSLIELQLGGNQLSGTIPM----MP 383
S P G + N S++ L + N LSG IP MP
Sbjct: 608 STRNPC-----------NITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMP 656
Query: 384 PRLQIALNLSSNLFEGPIPTTFARLNGLEVLDLSNNRFSGEIXXXXXXXXXXXXXXXXXX 443
LNL N G IP L GL +LDLS+N+ G I
Sbjct: 657 --YLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNN 714
Query: 444 XXSGVVPKFSKW 455
SG +P+ ++
Sbjct: 715 NLSGPIPEMGQF 726
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 131/271 (48%), Gaps = 16/271 (5%)
Query: 568 FSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS 627
F YK + G +K+L ++ Q G +F E+E++ + N++ + +
Sbjct: 51 FGKVYKGRLADGTLVAVKRLK--EERXQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMTP 107
Query: 628 DSAYLFYEYAPKGTLFDVLHGCLENA--LDWASRYSIAVGVAQGLAFLHGFTSNPILLLD 685
L Y Y G++ L E+ LDW R IA+G A+GLA+LH I+ D
Sbjct: 108 TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRD 167
Query: 686 LSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNV 745
+ NI L E +GD L K++D K V G++G+I PEY T + + +V
Sbjct: 168 VKAANILLDEEFEAVVGDFGLAKLMD-YKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDV 226
Query: 746 YSFGVILLELLTGKTAVNQGN-------ELAKWVLRNSAQQDKLDHILDFNVSRTSLAVR 798
+ +GV+LLEL+TG+ A + L WV + ++ KL+ ++D ++
Sbjct: 227 FGYGVMLLELITGQRAFDLARLANDDDVMLLDWV-KGLLKEKKLEALVDVDLQGNYKDEE 285
Query: 799 SQMLTVLKVAVACVSVSPEARPKMKSVLRML 829
+ L ++VA+ C SP RPKM V+RML
Sbjct: 286 VEQL--IQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 128/271 (47%), Gaps = 16/271 (5%)
Query: 568 FSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS 627
F YK + G +K+L + G +F E+E++ + N++ + +
Sbjct: 43 FGKVYKGRLADGXLVAVKRLK---EERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP 99
Query: 628 DSAYLFYEYAPKGTLFDVLHGCLENA--LDWASRYSIAVGVAQGLAFLHGFTSNPILLLD 685
L Y Y G++ L E+ LDW R IA+G A+GLA+LH I+ D
Sbjct: 100 TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRD 159
Query: 686 LSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNV 745
+ NI L E +GD L K++D K V G +G+I PEY T + + +V
Sbjct: 160 VKAANILLDEEFEAVVGDFGLAKLMD-YKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDV 218
Query: 746 YSFGVILLELLTGKTAVNQGN-------ELAKWVLRNSAQQDKLDHILDFNVSRTSLAVR 798
+ +GV+LLEL+TG+ A + L WV + ++ KL+ ++D ++
Sbjct: 219 FGYGVMLLELITGQRAFDLARLANDDDVMLLDWV-KGLLKEKKLEALVDVDLQGNYKDEE 277
Query: 799 SQMLTVLKVAVACVSVSPEARPKMKSVLRML 829
+ L ++VA+ C SP RPKM V+RML
Sbjct: 278 VEQL--IQVALLCTQSSPMERPKMSEVVRML 306
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 112/232 (48%), Gaps = 7/232 (3%)
Query: 600 HKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENA--LDWA 657
+FD+E++V+ K + N++ L + D L Y Y P G+L D L CL+ L W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWH 133
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG 717
R IA G A G+ FLH N + D+ + NI L +I D L + + T
Sbjct: 134 MRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 718 SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSA 777
S + G+ Y+ PE A +T ++YSFGV+LLE++TG AV++ E +
Sbjct: 191 MXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEE 249
Query: 778 QQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRML 829
+D+ I D+ + + A + + + VA C+ RP +K V ++L
Sbjct: 250 IEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 111/232 (47%), Gaps = 7/232 (3%)
Query: 600 HKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENA--LDWA 657
+FD+E++V+ K + N++ L + D L Y Y P G+L D L CL+ L W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWH 133
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG 717
R IA G A G+ FLH N + D+ + NI L +I D L + + T
Sbjct: 134 MRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 718 SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSA 777
+ G+ Y+ PE A +T ++YSFGV+LLE++TG AV++ E +
Sbjct: 191 MXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEE 249
Query: 778 QQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRML 829
+D+ I D+ + + A + + + VA C+ RP +K V ++L
Sbjct: 250 IEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 108/231 (46%), Gaps = 7/231 (3%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENA--LDWAS 658
+FD+E++V K + N++ L + D L Y Y P G+L D L CL+ L W
Sbjct: 67 QFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL-SCLDGTPPLSWHX 125
Query: 659 RYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGS 718
R IA G A G+ FLH N + D+ + NI L +I D L + +
Sbjct: 126 RCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVX 182
Query: 719 LSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQ 778
S + G+ Y PE A +T ++YSFGV+LLE++TG AV++ E +
Sbjct: 183 XSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEI 241
Query: 779 QDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRML 829
+D+ I D+ + + A + + VA C+ RP +K V ++L
Sbjct: 242 EDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLL 292
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 110/231 (47%), Gaps = 7/231 (3%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENA--LDWAS 658
+FD+E++V+ K + N++ L + D L Y Y P G+L D L CL+ L W
Sbjct: 70 QFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWHM 128
Query: 659 RYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGS 718
R IA G A G+ FLH N + D+ + NI L +I D L + +
Sbjct: 129 RCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVM 185
Query: 719 LSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQ 778
+ G+ Y+ PE A +T ++YSFGV+LLE++TG AV++ E +
Sbjct: 186 XXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEI 244
Query: 779 QDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRML 829
+D+ I D+ + + A + + + VA C+ RP +K V ++L
Sbjct: 245 EDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 295
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 103/209 (49%), Gaps = 15/209 (7%)
Query: 632 LFYEYAPKGTLFDVLHGCL--ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTR 689
L Y+Y G L L+G ++ W R I +G A+GL +LH + I+ D+ +
Sbjct: 112 LIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSI 168
Query: 690 NIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFG 749
NI L P+I D + K T V G++GYI PEY R+T +VYSFG
Sbjct: 169 NILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFG 228
Query: 750 VILLELLTGKTAVNQG-----NELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTV 804
V+L E+L ++A+ Q LA+W + S +L+ I+D N++ +R + L
Sbjct: 229 VVLFEVLCARSAIVQSLPREMVNLAEWAV-ESHNNGQLEQIVDPNLADK---IRPESLRK 284
Query: 805 L-KVAVACVSVSPEARPKMKSVLRMLLNA 832
AV C+++S E RP M VL L A
Sbjct: 285 FGDTAVKCLALSSEDRPSMGDVLWKLEYA 313
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 103/209 (49%), Gaps = 15/209 (7%)
Query: 632 LFYEYAPKGTLFDVLHGC--LENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTR 689
L Y+Y G L L+G ++ W R I +G A+GL +LH + I+ D+ +
Sbjct: 112 LIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSI 168
Query: 690 NIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFG 749
NI L P+I D + K T V G++GYI PEY R+T +VYSFG
Sbjct: 169 NILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFG 228
Query: 750 VILLELLTGKTAVNQG-----NELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTV 804
V+L E+L ++A+ Q LA+W + S +L+ I+D N++ +R + L
Sbjct: 229 VVLFEVLCARSAIVQSLPREMVNLAEWAV-ESHNNGQLEQIVDPNLADK---IRPESLRK 284
Query: 805 L-KVAVACVSVSPEARPKMKSVLRMLLNA 832
AV C+++S E RP M VL L A
Sbjct: 285 FGDTAVKCLALSSEDRPSMGDVLWKLEYA 313
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 121/237 (51%), Gaps = 17/237 (7%)
Query: 107 IDLSANNLSGS--VPDRIGELSKLEVLILSA-NNLDGRLPTSLASITTLSRFAANQNKFS 163
+DLS NL +P + L L L + NNL G +P ++A +T L S
Sbjct: 55 LDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVS 114
Query: 164 GSVPGGITRF--LRNLDLSYNKLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQN---MSP 218
G++P +++ L LD SYN L G +P + S PNL I N + G++P + S
Sbjct: 115 GAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSK 174
Query: 219 NLVRLRLGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNE 278
+ + N L G+IP TF +L L +++L N G GS ++ ++LA+N
Sbjct: 175 LFTSMTISRNRLTGKIP-PTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKN- 231
Query: 279 LNGSLPIQLGSLGI---LQVMNLQLNKLSGEIPSQFSQLKLLSTMNISWNSLSGSIP 332
SL LG +G+ L ++L+ N++ G +P +QLK L ++N+S+N+L G IP
Sbjct: 232 ---SLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 113/243 (46%), Gaps = 29/243 (11%)
Query: 70 LPINLGKTKALEELVLSG-NAFHGEIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKL 128
+P +L L L + G N G IP IA L + ++ N+SG++PD + ++ L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 129 EVLILSANNLDGRLPTSLASITTLSRFAANQNKFSGSVP---GGITRFLRNLDLSYNKLL 185
L S N L G LP S++S+ L + N+ SG++P G ++ ++ +S N+L
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 186 GVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMSPNLVRLRLGTNLLIGEIPSATFTSLEKL 245
G IP ++ NL +DLS NMLEG S F S +
Sbjct: 188 GKIP-PTFANLNLAFVDLSRNMLEGDA-----------------------SVLFGSDKNT 223
Query: 246 TYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNGSLPIQLGSLGILQVMNLQLNKLSG 305
+ L NS + ++G ++L L+L N + G+LP L L L +N+ N L G
Sbjct: 224 QKIHLAKNSLAFDL-GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCG 282
Query: 306 EIP 308
EIP
Sbjct: 283 EIP 285
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 100/244 (40%), Gaps = 30/244 (12%)
Query: 24 PTFNGFAGLEVLDF----SSNNLNGNINLQFDELVXXXXXXXXXXXXXGFLPINLGKTKA 79
P + A L L+F NNL G I +L G +P L + K
Sbjct: 67 PIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKT 126
Query: 80 LEELVLSGNAFHGEIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKL-EVLILSANNL 138
L L S NA G +P I+ NL I N +SG++PD G SKL + +S N L
Sbjct: 127 LVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRL 186
Query: 139 DGRLPTSLASITTLSRFAANQNKFSGSVPGGITRFLRNLDLSYNKLLGVIPIDLLSHPNL 198
G++P + A++ L +DLS N L G + S N
Sbjct: 187 TGKIPPTFANLN-----------------------LAFVDLSRNMLEGDASVLFGSDKNT 223
Query: 199 QTIDLSVNMLEGSLPQ-NMSPNLVRLRLGTNLLIGEIPSATFTSLEKLTYLELDNNSFTG 257
Q I L+ N L L + +S NL L L N + G +P T L+ L L + N+ G
Sbjct: 224 QKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQG-LTQLKFLHSLNVSFNNLCG 282
Query: 258 MIPQ 261
IPQ
Sbjct: 283 EIPQ 286
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 80/170 (47%), Gaps = 29/170 (17%)
Query: 259 IPQQLGSCRSLTLLNLAQ-NELNGSLPIQLGSLGILQVMNLQLNKLSGEIPSQFSQLKLL 317
IP L + L L + N L G +P + L L + + +SG IP SQ+K L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 318 STMNISWNSLSGSIPSFXXXXXXXXXXXXXXXXXXGSIPNSITNMRSLIELQLGGNQLSG 377
T++ S+N+LSG++P SI+++ +L+ + GN++SG
Sbjct: 128 VTLDFSYNALSGTLPP------------------------SISSLPNLVGITFDGNRISG 163
Query: 378 TIPMMP---PRLQIALNLSSNLFEGPIPTTFARLNGLEVLDLSNNRFSGE 424
IP +L ++ +S N G IP TFA LN L +DLS N G+
Sbjct: 164 AIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGD 212
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 602 FDKELEVLGKLSNSNVMT--PLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASR 659
F++E+E+L L + N++ + Y + L EY P G+L D L E +D
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER-IDHIKL 119
Query: 660 YSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSL 719
+ +G+ +L + + DL+TRNI +++ +IGD L KV+ K +
Sbjct: 120 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 176
Query: 720 STVAGS-VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
S + + PE + ++A +V+SFGV+L EL T
Sbjct: 177 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 602 FDKELEVLGKLSNSNVMT--PLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASR 659
F++E+E+L L + N++ + Y + L EY P G+L D L E +D
Sbjct: 76 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKL 134
Query: 660 YSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSL 719
+ +G+ +L + + DL+TRNI +++ +IGD L KV+ K +
Sbjct: 135 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 191
Query: 720 STVAGS-VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
S + + PE + ++A +V+SFGV+L EL T
Sbjct: 192 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 602 FDKELEVLGKLSNSNVMT--PLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASR 659
F++E+E+L L + N++ + Y + L EY P G+L D L E +D
Sbjct: 76 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKL 134
Query: 660 YSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSL 719
+ +G+ +L + + DL+TRNI +++ +IGD L KV+ K +
Sbjct: 135 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 191
Query: 720 STVAGS-VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
S + + PE + ++A +V+SFGV+L EL T
Sbjct: 192 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 602 FDKELEVLGKLSNSNVMT--PLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASR 659
F++E+E+L L + N++ + Y + L EY P G+L D L E +D
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKL 119
Query: 660 YSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSL 719
+ +G+ +L + + DL+TRNI +++ +IGD L KV+ K +
Sbjct: 120 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 176
Query: 720 STVAGS-VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
S + + PE + ++A +V+SFGV+L EL T
Sbjct: 177 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 602 FDKELEVLGKLSNSNVMTP--LAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASR 659
F++E+E+L L + N++ + Y + L EY P G+L D L E +D
Sbjct: 57 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKL 115
Query: 660 YSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSL 719
+ +G+ +L + + DL+TRNI +++ +IGD L KV+ K +
Sbjct: 116 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 172
Query: 720 STVAGS-VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
S + + PE + ++A +V+SFGV+L EL T
Sbjct: 173 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 602 FDKELEVLGKLSNSNVMT--PLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASR 659
F++E+E+L L + N++ + Y + L EY P G+L D L E +D
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKL 116
Query: 660 YSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSL 719
+ +G+ +L + + DL+TRNI +++ +IGD L KV+ K +
Sbjct: 117 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 173
Query: 720 STVAGS-VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
S + + PE + ++A +V+SFGV+L EL T
Sbjct: 174 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 602 FDKELEVLGKLSNSNVMT--PLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASR 659
F++E+E+L L + N++ + Y + L EY P G+L D L E +D
Sbjct: 65 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKL 123
Query: 660 YSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSL 719
+ +G+ +L + + DL+TRNI +++ +IGD L KV+ K +
Sbjct: 124 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 180
Query: 720 STVAGS-VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
S + + PE + ++A +V+SFGV+L EL T
Sbjct: 181 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 602 FDKELEVLGKLSNSNVMT--PLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASR 659
F++E+E+L L + N++ + Y + L EY P G+L D L E +D
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKL 116
Query: 660 YSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSL 719
+ +G+ +L + + DL+TRNI +++ +IGD L KV+ K +
Sbjct: 117 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 173
Query: 720 STVAGS-VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
S + + PE + ++A +V+SFGV+L EL T
Sbjct: 174 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 602 FDKELEVLGKLSNSNVMT--PLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASR 659
F++E+E+L L + N++ + Y + L EY P G+L D L E +D
Sbjct: 63 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKL 121
Query: 660 YSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSL 719
+ +G+ +L + + DL+TRNI +++ +IGD L KV+ K +
Sbjct: 122 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 178
Query: 720 STVAGS-VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
S + + PE + ++A +V+SFGV+L EL T
Sbjct: 179 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 602 FDKELEVLGKLSNSNVMT--PLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASR 659
F++E+E+L L + N++ + Y + L EY P G+L D L E +D
Sbjct: 56 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKL 114
Query: 660 YSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSL 719
+ +G+ +L + + DL+TRNI +++ +IGD L KV+ K +
Sbjct: 115 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 171
Query: 720 STVAGS-VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
S + + PE + ++A +V+SFGV+L EL T
Sbjct: 172 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 602 FDKELEVLGKLSNSNVMT--PLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASR 659
F++E+E+L L + N++ + Y + L EY P G+L D L E +D
Sbjct: 62 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKL 120
Query: 660 YSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSL 719
+ +G+ +L + + DL+TRNI +++ +IGD L KV+ K +
Sbjct: 121 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 177
Query: 720 STVAGS-VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
S + + PE + ++A +V+SFGV+L EL T
Sbjct: 178 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 602 FDKELEVLGKLSNSNVMT--PLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASR 659
F++E+E+L L + N++ + Y + L EY P G+L D L E +D
Sbjct: 64 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKL 122
Query: 660 YSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSL 719
+ +G+ +L + + DL+TRNI +++ +IGD L KV+ K +
Sbjct: 123 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 179
Query: 720 STVAGS-VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
S + + PE + ++A +V+SFGV+L EL T
Sbjct: 180 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 602 FDKELEVLGKLSNSNVMT--PLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASR 659
F++E+E+L L + N++ + Y + L EY P G+L D L E +D
Sbjct: 89 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKL 147
Query: 660 YSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSL 719
+ +G+ +L + + DL+TRNI +++ +IGD L KV+ K +
Sbjct: 148 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 204
Query: 720 STVAGS-VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
S + + PE + ++A +V+SFGV+L EL T
Sbjct: 205 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 602 FDKELEVLGKLSNSNVMT--PLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASR 659
F++E+E+L L + N++ + Y + L EY P G+L D L E +D
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKL 116
Query: 660 YSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSL 719
+ +G+ +L + + DL+TRNI +++ +IGD L KV+ K +
Sbjct: 117 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKV 173
Query: 720 STVAGS-VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
S + + PE + ++A +V+SFGV+L EL T
Sbjct: 174 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 119/266 (44%), Gaps = 26/266 (9%)
Query: 568 FSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS 627
F T ++A G +K L D F ++F +E+ ++ +L + N++ + V
Sbjct: 50 FGTVHRAEW-HGSDVAVKILMEQD--FHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQP 106
Query: 628 DSAYLFYEYAPKGTLFDVLH--GCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLD 685
+ + EY +G+L+ +LH G E LD R S+A VA+G+ +LH + PI+ D
Sbjct: 107 PNLSIVTEYLSRGSLYRLLHKSGAREQ-LDERRRLSMAYDVAKGMNYLHN-RNPPIVHRD 164
Query: 686 LSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLST--VAGSVGYIPPEYAYTMRVTMAG 743
L + N+ + ++ D L ++ K++ L + AG+ ++ PE
Sbjct: 165 LKSPNLLVDKKYTVKVCDFGLSRL----KASXFLXSKXAAGTPEWMAPEVLRDEPSNEKS 220
Query: 744 NVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLT 803
+VYSFGVIL EL T + W N AQ + + F R + R+
Sbjct: 221 DVYSFGVILWELATLQQP---------WGNLNPAQ---VVAAVGFKCKRLEIP-RNLNPQ 267
Query: 804 VLKVAVACVSVSPEARPKMKSVLRML 829
V + C + P RP +++ +L
Sbjct: 268 VAAIIEGCWTNEPWKRPSFATIMDLL 293
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 8/161 (4%)
Query: 602 FDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYS 661
F E+ VL K + N++ + Y A A + ++ +L+ LH +E +
Sbjct: 51 FKNEVGVLRKTRHVNILLFMGYSTAPQLA-IVTQWCEGSSLYHHLH-IIETKFEMIKLID 108
Query: 662 IAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLST 721
IA AQG+ +LH + I+ DL + NIFL +IGD L V +
Sbjct: 109 IARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 165
Query: 722 VAGSVGYIPPEYAYTMR---VTMAGNVYSFGVILLELLTGK 759
++GS+ ++ PE + +VY+FG++L EL+TG+
Sbjct: 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 112/243 (46%), Gaps = 23/243 (9%)
Query: 591 DKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLH--G 648
++ F ++F +E+ ++ +L + N++ + V + + EY +G+L+ +LH G
Sbjct: 70 EQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSG 129
Query: 649 CLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCK 708
E LD R S+A VA+G+ +LH + PI+ +L + N+ + ++ D L +
Sbjct: 130 AREQ-LDERRRLSMAYDVAKGMNYLHN-RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR 187
Query: 709 VIDPSKSTGSLST--VAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGN 766
+ K++ LS+ AG+ ++ PE +VYSFGVIL EL T +
Sbjct: 188 L----KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP----- 238
Query: 767 ELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVL 826
W N AQ + + F R + R+ V + C + P RP +++
Sbjct: 239 ----WGNLNPAQ---VVAAVGFKCKRLEIP-RNLNPQVAAIIEGCWTNEPWKRPSFATIM 290
Query: 827 RML 829
+L
Sbjct: 291 DLL 293
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 98/243 (40%), Gaps = 36/243 (14%)
Query: 594 FQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENA 653
F + F KE++V+ L + NV+ + + EY GTL ++ +++
Sbjct: 46 FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKS-MDSQ 104
Query: 654 LDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713
W+ R S A +A G+A+LH I+ DL++ N ++ K + D L +++
Sbjct: 105 YPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDE 161
Query: 714 KST------------GSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTA 761
K+ TV G+ ++ PE +V+SFG++L E++
Sbjct: 162 KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIG---- 217
Query: 762 VNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVR----SQMLTVLKVAVACVSVSPE 817
R +A D L +DF ++ R + + + V C + PE
Sbjct: 218 ------------RVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPE 265
Query: 818 ARP 820
RP
Sbjct: 266 KRP 268
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 9/163 (5%)
Query: 597 GSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDW 656
G H+ +E+E+ L + N++ Y + YL EYAP+G ++ L + D
Sbjct: 55 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKL--SKFDE 112
Query: 657 ASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKST 716
+ +A L++ H S ++ D+ N+ L S E +I D S+ T
Sbjct: 113 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 169
Query: 717 GSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGK 759
T+ G++ Y+PPE +++S GV+ E L GK
Sbjct: 170 ----TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 62.4 bits (150), Expect = 9e-10, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 12/204 (5%)
Query: 556 VANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNS 615
+ PL K +F Y A + K+ + ++ + G H+ +E+E+ L +
Sbjct: 12 IGRPLG---KGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 616 NVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHG 675
N++ Y S YL EYAP GT++ L + D + +A L++ H
Sbjct: 69 NILRLYGYFHDSTRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCH- 125
Query: 676 FTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAY 735
S ++ D+ N+ L S E +I D V PS +L G++ Y+PPE
Sbjct: 126 --SKKVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRAAL---CGTLDYLPPEMIE 179
Query: 736 TMRVTMAGNVYSFGVILLELLTGK 759
+++S GV+ E L GK
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 9/163 (5%)
Query: 597 GSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDW 656
G H+ +E+E+ L + N++ Y + YL EYAP GT++ L + D
Sbjct: 67 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDE 124
Query: 657 ASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKST 716
+ +A L++ H S ++ D+ N+ L S E +I D S+ T
Sbjct: 125 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 181
Query: 717 GSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGK 759
T+ G++ Y+PPE +++S GV+ E L GK
Sbjct: 182 ----TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 25/232 (10%)
Query: 602 FDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYS 661
F E+ VL K + N++ + Y A + ++ +L+ LH E +
Sbjct: 55 FKNEVGVLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHAS-ETKFEMKKLID 112
Query: 662 IAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLST 721
IA A+G+ +LH + I+ DL + NIFL +IGD L V +
Sbjct: 113 IARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQ 169
Query: 722 VAGSVGYIPPEYAYTMR---VTMAGNVYSFGVILLELLTGK---TAVNQGNELAKWVLRN 775
++GS+ ++ PE + +VY+FG++L EL+TG+ + +N +++ + V R
Sbjct: 170 LSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRG 229
Query: 776 SAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVA-CVSVSPEARPKMKSVL 826
S D +S+ VRS +K +A C+ + RP +L
Sbjct: 230 SLSPD---------LSK----VRSNCPKRMKRLMAECLKKKRDERPSFPRIL 268
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 9/163 (5%)
Query: 597 GSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDW 656
G H+ +E+E+ L + N++ Y + YL EYAP GT++ L + D
Sbjct: 51 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDE 108
Query: 657 ASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKST 716
+ +A L++ H S ++ D+ N+ L S E +I D S+ T
Sbjct: 109 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRT 165
Query: 717 GSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGK 759
T++G++ Y+PPE +++S GV+ E L GK
Sbjct: 166 ----TLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 9/163 (5%)
Query: 597 GSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDW 656
G H+ +E+E+ L + N++ Y + YL EYAP GT++ L + D
Sbjct: 55 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDE 112
Query: 657 ASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKST 716
+ +A L++ H S ++ D+ N+ L S E +I D S+ T
Sbjct: 113 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 169
Query: 717 GSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGK 759
T+ G++ Y+PPE +++S GV+ E L GK
Sbjct: 170 ----TLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 83/195 (42%), Gaps = 9/195 (4%)
Query: 565 KTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYV 624
K +F Y A K+ + ++ + G H+ +E+E+ L + N++ Y
Sbjct: 44 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 103
Query: 625 LASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLL 684
+ YL EYAP GT++ L + D + +A L++ H S ++
Sbjct: 104 HDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCH---SKRVIHR 158
Query: 685 DLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGN 744
D+ N+ L S E +I D S+ T T+ G++ Y+PPE +
Sbjct: 159 DIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRMHDEKVD 214
Query: 745 VYSFGVILLELLTGK 759
++S GV+ E L GK
Sbjct: 215 LWSLGVLCYEFLVGK 229
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 12/204 (5%)
Query: 556 VANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNS 615
+ PL K +F Y A K+ + ++ + G H+ +E+E+ L +
Sbjct: 12 IGRPLG---KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 616 NVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHG 675
N++ Y + YL EYAP GT++ L + D + +A L++ H
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCH- 125
Query: 676 FTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAY 735
S ++ D+ N+ L S E +I D S+ T T+ G++ Y+PPE
Sbjct: 126 --SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIE 179
Query: 736 TMRVTMAGNVYSFGVILLELLTGK 759
+++S GV+ E L GK
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 602 FDKELEVLGKLSNSNVMT--PLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASR 659
F++E+E+L L + N++ + Y + L EY P G+L D L E +D
Sbjct: 59 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKL 117
Query: 660 YSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSL 719
+ +G+ +L + + +L+TRNI +++ +IGD L KV+ K +
Sbjct: 118 LQYTSQICKGMEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKV 174
Query: 720 STVAGS-VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
S + + PE + ++A +V+SFGV+L EL T
Sbjct: 175 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 9/163 (5%)
Query: 597 GSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDW 656
G H+ +E+E+ L + N++ Y + YL EYAP GT++ L + D
Sbjct: 53 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDE 110
Query: 657 ASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKST 716
+ +A L++ H S ++ D+ N+ L S E +I D S+ T
Sbjct: 111 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 167
Query: 717 GSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGK 759
T+ G++ Y+PPE +++S GV+ E L GK
Sbjct: 168 ----TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 8/161 (4%)
Query: 602 FDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYS 661
F E+ VL K + N++ + Y A + ++ +L+ LH +E +
Sbjct: 79 FKNEVGVLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLH-IIETKFEMIKLID 136
Query: 662 IAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLST 721
IA AQG+ +LH + I+ DL + NIFL +IGD L V +
Sbjct: 137 IARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 193
Query: 722 VAGSVGYIPPEYAYTMR---VTMAGNVYSFGVILLELLTGK 759
++GS+ ++ PE + +VY+FG++L EL+TG+
Sbjct: 194 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 8/161 (4%)
Query: 602 FDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYS 661
F E+ VL K + N++ + Y A + ++ +L+ LH +E +
Sbjct: 78 FKNEVGVLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLH-IIETKFEMIKLID 135
Query: 662 IAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLST 721
IA AQG+ +LH + I+ DL + NIFL +IGD L V +
Sbjct: 136 IARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 192
Query: 722 VAGSVGYIPPEYAYTMR---VTMAGNVYSFGVILLELLTGK 759
++GS+ ++ PE + +VY+FG++L EL+TG+
Sbjct: 193 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 9/163 (5%)
Query: 597 GSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDW 656
G H+ +E+E+ L + N++ Y + YL EYAP GT++ L + D
Sbjct: 55 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDE 112
Query: 657 ASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKST 716
+ +A L++ H S ++ D+ N+ L S E +I D S+ T
Sbjct: 113 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 169
Query: 717 GSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGK 759
T+ G++ Y+PPE +++S GV+ E L GK
Sbjct: 170 ----TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 602 FDKELEVLGKLSNSNVMT--PLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASR 659
F++E+E+L L + N++ + Y + L E+ P G+L + L E +D
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKER-IDHIKL 119
Query: 660 YSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSL 719
+ +G+ +L + + DL+TRNI +++ +IGD L KV+ K +
Sbjct: 120 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 176
Query: 720 STVAGS-VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
S + + PE + ++A +V+SFGV+L EL T
Sbjct: 177 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 107/234 (45%), Gaps = 29/234 (12%)
Query: 602 FDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYS 661
F E+ VL K + N++ + Y A A + ++ +L+ LH E +
Sbjct: 67 FKNEVGVLRKTRHVNILLFMGYSTAPQLA-IVTQWCEGSSLYHHLHAS-ETKFEMKKLID 124
Query: 662 IAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGS--L 719
IA A+G+ +LH + I+ DL + NIFL +IGD L + S+ +GS
Sbjct: 125 IARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLA--TEKSRWSGSHQF 179
Query: 720 STVAGSVGYIPPEYAYTMR---VTMAGNVYSFGVILLELLTGK---TAVNQGNELAKWVL 773
++GS+ ++ PE + +VY+FG++L EL+TG+ + +N +++ + V
Sbjct: 180 EQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVG 239
Query: 774 RNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVA-CVSVSPEARPKMKSVL 826
R S D +S+ VRS +K +A C+ + RP +L
Sbjct: 240 RGSLSPD---------LSK----VRSNCPKRMKRLMAECLKKKRDERPSFPRIL 280
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 12/204 (5%)
Query: 556 VANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNS 615
+ PL K +F Y A K+ + ++ + G H+ +E+E+ L +
Sbjct: 16 IGRPLG---KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 616 NVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHG 675
N++ Y + YL EYAP GT++ L + D + +A L++ H
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCH- 129
Query: 676 FTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAY 735
S ++ D+ N+ L S E +I D S+ T T+ G++ Y+PPE
Sbjct: 130 --SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIE 183
Query: 736 TMRVTMAGNVYSFGVILLELLTGK 759
+++S GV+ E L GK
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 12/204 (5%)
Query: 556 VANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNS 615
+ PL K +F Y A K+ + ++ + G H+ +E+E+ L +
Sbjct: 11 IGRPLG---KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 67
Query: 616 NVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHG 675
N++ Y + YL EYAP GT++ L + D + +A L++ H
Sbjct: 68 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCH- 124
Query: 676 FTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAY 735
S ++ D+ N+ L S E +I D S+ T T+ G++ Y+PPE
Sbjct: 125 --SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIE 178
Query: 736 TMRVTMAGNVYSFGVILLELLTGK 759
+++S GV+ E L GK
Sbjct: 179 GRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 12/204 (5%)
Query: 556 VANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNS 615
+ PL K +F Y A K+ + ++ + G H+ +E+E+ L +
Sbjct: 15 IGRPLG---KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 616 NVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHG 675
N++ Y + YL EYAP GT++ L + D + +A L++ H
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCH- 128
Query: 676 FTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAY 735
S ++ D+ N+ L S E +I D S+ T T+ G++ Y+PPE
Sbjct: 129 --SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIE 182
Query: 736 TMRVTMAGNVYSFGVILLELLTGK 759
+++S GV+ E L GK
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 8/161 (4%)
Query: 602 FDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYS 661
F E+ VL K + N++ + Y A + ++ +L+ LH +E +
Sbjct: 56 FKNEVGVLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLH-IIETKFEMIKLID 113
Query: 662 IAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLST 721
IA AQG+ +LH + I+ DL + NIFL +IGD L V +
Sbjct: 114 IARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 170
Query: 722 VAGSVGYIPPEYAYTMR---VTMAGNVYSFGVILLELLTGK 759
++GS+ ++ PE + +VY+FG++L EL+TG+
Sbjct: 171 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 8/161 (4%)
Query: 602 FDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYS 661
F E+ VL K + N++ + Y A + ++ +L+ LH +E +
Sbjct: 53 FKNEVGVLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLH-IIETKFEMIKLID 110
Query: 662 IAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLST 721
IA AQG+ +LH + I+ DL + NIFL +IGD L V +
Sbjct: 111 IARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 167
Query: 722 VAGSVGYIPPEYAYTMR---VTMAGNVYSFGVILLELLTGK 759
++GS+ ++ PE + +VY+FG++L EL+TG+
Sbjct: 168 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 8/161 (4%)
Query: 602 FDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYS 661
F E+ VL K + N++ + Y A + ++ +L+ LH +E +
Sbjct: 56 FKNEVGVLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLH-IIETKFEMIKLID 113
Query: 662 IAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLST 721
IA AQG+ +LH + I+ DL + NIFL +IGD L V +
Sbjct: 114 IARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 170
Query: 722 VAGSVGYIPPEYAYTMR---VTMAGNVYSFGVILLELLTGK 759
++GS+ ++ PE + +VY+FG++L EL+TG+
Sbjct: 171 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 8/161 (4%)
Query: 602 FDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYS 661
F E+ VL K + N++ + Y A + ++ +L+ LH +E +
Sbjct: 51 FKNEVGVLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLH-IIETKFEMIKLID 108
Query: 662 IAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLST 721
IA AQG+ +LH + I+ DL + NIFL +IGD L V +
Sbjct: 109 IARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 165
Query: 722 VAGSVGYIPPEYAYTMR---VTMAGNVYSFGVILLELLTGK 759
++GS+ ++ PE + +VY+FG++L EL+TG+
Sbjct: 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 90/173 (52%), Gaps = 18/173 (10%)
Query: 600 HKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENA--LDWA 657
+F +E+ ++ L++ N++ Y L + + E+ P G L+ H L+ A + W+
Sbjct: 68 QEFQREVFIMSNLNHPNIVK--LYGLMHNPPRMVMEFVPCGDLY---HRLLDKAHPIKWS 122
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELC-KVIDPSKST 716
+ + + +A G+ ++ + PI+ DL + NIFL+SL E + +C KV D S S
Sbjct: 123 VKLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDE----NAPVCAKVADFSLSQ 177
Query: 717 GSLSTVAGSVG---YIPPEY--AYTMRVTMAGNVYSFGVILLELLTGKTAVNQ 764
S+ +V+G +G ++ PE A T + YSF +IL +LTG+ ++
Sbjct: 178 QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 9/163 (5%)
Query: 597 GSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDW 656
G H+ +E+E+ L + N++ Y + YL EYAP GT++ L + D
Sbjct: 51 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDE 108
Query: 657 ASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKST 716
+ +A L++ H S ++ D+ N+ L S E +I D V PS
Sbjct: 109 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRR 164
Query: 717 GSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGK 759
T+ G++ Y+PPE +++S GV+ E L GK
Sbjct: 165 ---DTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 12/204 (5%)
Query: 556 VANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNS 615
+ PL K +F Y A K+ + ++ + G H+ +E+E+ L +
Sbjct: 15 IGRPLG---KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 616 NVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHG 675
N++ Y + YL EYAP GT++ L + D + +A L++ H
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCH- 128
Query: 676 FTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAY 735
S ++ D+ N+ L S E +I D V PS +L G++ Y+PPE
Sbjct: 129 --SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAAL---CGTLDYLPPEMIE 182
Query: 736 TMRVTMAGNVYSFGVILLELLTGK 759
+++S GV+ E L GK
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 12/204 (5%)
Query: 556 VANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNS 615
+ PL K +F Y A K+ + ++ + G H+ +E+E+ L +
Sbjct: 9 IGRPLG---KGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 65
Query: 616 NVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHG 675
N++ Y + YL EYAP GT++ L + D + +A L++ H
Sbjct: 66 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCH- 122
Query: 676 FTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAY 735
S ++ D+ N+ L S E +I D S+ T T+ G++ Y+PPE
Sbjct: 123 --SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIE 176
Query: 736 TMRVTMAGNVYSFGVILLELLTGK 759
+++S GV+ E L GK
Sbjct: 177 GRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 106/234 (45%), Gaps = 29/234 (12%)
Query: 602 FDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYS 661
F E+ VL K + N++ + Y A + ++ +L+ LH E +
Sbjct: 67 FKNEVGVLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHAS-ETKFEMKKLID 124
Query: 662 IAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGS--L 719
IA A+G+ +LH + I+ DL + NIFL +IGD L + S+ +GS
Sbjct: 125 IARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLA--TEKSRWSGSHQF 179
Query: 720 STVAGSVGYIPPEYAYTMR---VTMAGNVYSFGVILLELLTGK---TAVNQGNELAKWVL 773
++GS+ ++ PE + +VY+FG++L EL+TG+ + +N +++ + V
Sbjct: 180 EQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVG 239
Query: 774 RNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVA-CVSVSPEARPKMKSVL 826
R S D +S+ VRS +K +A C+ + RP +L
Sbjct: 240 RGSLSPD---------LSK----VRSNCPKRMKRLMAECLKKKRDERPSFPRIL 280
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 12/204 (5%)
Query: 556 VANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNS 615
+ PL K +F Y A K+ + ++ + G H+ +E+E+ L +
Sbjct: 12 IGRPLG---KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 616 NVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHG 675
N++ Y + YL EYAP GT++ L + D + +A L++ H
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCH- 125
Query: 676 FTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAY 735
S ++ D+ N+ L S E +I D V PS +L G++ Y+PPE
Sbjct: 126 --SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRAAL---CGTLDYLPPEMIE 179
Query: 736 TMRVTMAGNVYSFGVILLELLTGK 759
+++S GV+ E L GK
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 82/195 (42%), Gaps = 9/195 (4%)
Query: 565 KTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYV 624
K +F Y A K+ + ++ + G H+ +E+E+ L + N++ Y
Sbjct: 44 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 103
Query: 625 LASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLL 684
+ YL EYAP GT++ L + D + +A L++ H S ++
Sbjct: 104 HDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCH---SKRVIHR 158
Query: 685 DLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGN 744
D+ N+ L S E +I D V PS L G++ Y+PPE +
Sbjct: 159 DIKPENLLLGSAGELKIADFGWS-VHAPSSRRDDL---CGTLDYLPPEMIEGRMHDEKVD 214
Query: 745 VYSFGVILLELLTGK 759
++S GV+ E L GK
Sbjct: 215 LWSLGVLCYEFLVGK 229
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 89/173 (51%), Gaps = 18/173 (10%)
Query: 600 HKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENA--LDWA 657
+F +E+ ++ L++ N++ Y L + + E+ P G L+ H L+ A + W+
Sbjct: 68 QEFQREVFIMSNLNHPNIVK--LYGLMHNPPRMVMEFVPCGDLY---HRLLDKAHPIKWS 122
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELC-KVIDPSKST 716
+ + + +A G+ ++ + PI+ DL + NIFL+SL E + +C KV D S
Sbjct: 123 VKLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDE----NAPVCAKVADFGTSQ 177
Query: 717 GSLSTVAGSVG---YIPPEY--AYTMRVTMAGNVYSFGVILLELLTGKTAVNQ 764
S+ +V+G +G ++ PE A T + YSF +IL +LTG+ ++
Sbjct: 178 QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 11/185 (5%)
Query: 602 FDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYS 661
F E+ VL K + N++ + Y + D+ + ++ +L+ LH E
Sbjct: 79 FRNEVAVLRKTRHVNILLFMGY-MTKDNLAIVTQWCEGSSLYKHLH-VQETKFQMFQLID 136
Query: 662 IAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLST 721
IA AQG+ +LH + I+ D+ + NIFL +IGD L V + +
Sbjct: 137 IARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQ 193
Query: 722 VAGSVGYIPPEYAYTMR---VTMAGNVYSFGVILLELLTGK---TAVNQGNELAKWVLRN 775
GSV ++ PE + +VYS+G++L EL+TG+ + +N +++ V R
Sbjct: 194 PTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRG 253
Query: 776 SAQQD 780
A D
Sbjct: 254 YASPD 258
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 12/163 (7%)
Query: 602 FDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYS 661
F E+ VL K + N++ + Y A + ++ +L+ LH +E +
Sbjct: 79 FKNEVGVLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLH-IIETKFEMIKLID 136
Query: 662 IAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGS--L 719
IA AQG+ +LH + I+ DL + NIFL +IGD L + S+ +GS
Sbjct: 137 IARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA--TEKSRWSGSHQF 191
Query: 720 STVAGSVGYIPPEYAYTMR---VTMAGNVYSFGVILLELLTGK 759
++GS+ ++ PE + +VY+FG++L EL+TG+
Sbjct: 192 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 12/204 (5%)
Query: 556 VANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNS 615
+ PL K +F Y A K+ + ++ + G H+ +E+E+ L +
Sbjct: 12 IGRPLG---KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 616 NVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHG 675
N++ Y + YL EYAP GT++ L + D + +A L++ H
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCH- 125
Query: 676 FTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAY 735
S ++ D+ N+ L S E +I D S+ T + G++ Y+PPE
Sbjct: 126 --SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----ELCGTLDYLPPEMIE 179
Query: 736 TMRVTMAGNVYSFGVILLELLTGK 759
+++S GV+ E L GK
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 12/163 (7%)
Query: 602 FDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYS 661
F E+ VL K + N++ + Y A + ++ +L+ LH +E +
Sbjct: 71 FKNEVGVLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLH-IIETKFEMIKLID 128
Query: 662 IAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGS--L 719
IA AQG+ +LH + I+ DL + NIFL +IGD L + S+ +GS
Sbjct: 129 IARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA--TEKSRWSGSHQF 183
Query: 720 STVAGSVGYIPPEYAYTMR---VTMAGNVYSFGVILLELLTGK 759
++GS+ ++ PE + +VY+FG++L EL+TG+
Sbjct: 184 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 71/163 (43%), Gaps = 9/163 (5%)
Query: 597 GSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDW 656
G H+ +E+E+ L + N++ Y + YL EYAP+G ++ L + D
Sbjct: 55 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKL--SKFDE 112
Query: 657 ASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKST 716
+ +A L++ H S ++ D+ N+ L S E +I D V PS
Sbjct: 113 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRR 168
Query: 717 GSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGK 759
L G++ Y+PPE +++S GV+ E L GK
Sbjct: 169 XXL---XGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 9/163 (5%)
Query: 597 GSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDW 656
G H+ +E+E+ L + N++ Y + YL EYAP GT++ L + D
Sbjct: 52 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDE 109
Query: 657 ASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKST 716
+ +A L++ H S ++ D+ N+ L S E +I + S+ T
Sbjct: 110 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRT 166
Query: 717 GSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGK 759
T+ G++ Y+PPE +++S GV+ E L GK
Sbjct: 167 ----TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 9/163 (5%)
Query: 597 GSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDW 656
G H+ +E+E+ L + N++ Y + YL EYAP GT++ L + D
Sbjct: 51 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDE 108
Query: 657 ASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKST 716
+ +A L++ H S ++ D+ N+ L S E +I D V PS
Sbjct: 109 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRR 164
Query: 717 GSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGK 759
L G++ Y+PPE +++S GV+ E L GK
Sbjct: 165 TDL---CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 82/167 (49%), Gaps = 11/167 (6%)
Query: 597 GSHHKFD--KELEVLGKLSNSNVMTPLAYVLASDSA---YLFYEYAPKGTLFDVLHGCLE 651
G +H D KE+E+L L + N++ + D L E+ P G+L + L +
Sbjct: 51 GGNHIADLKKEIEILRNLYHENIVK-YKGICTEDGGNGIKLIMEFLPSGSLKEYLPK-NK 108
Query: 652 NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711
N ++ + AV + +G+ +L S + DL+ RN+ ++S + +IGD L K I+
Sbjct: 109 NKINLKQQLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 165
Query: 712 PSKSTGSLSTVAGS-VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
K ++ S V + PE + +A +V+SFGV L ELLT
Sbjct: 166 TDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 82/167 (49%), Gaps = 11/167 (6%)
Query: 597 GSHHKFD--KELEVLGKLSNSNVMTPLAYVLASDSA---YLFYEYAPKGTLFDVLHGCLE 651
G +H D KE+E+L L + N++ + D L E+ P G+L + L +
Sbjct: 63 GGNHIADLKKEIEILRNLYHENIVK-YKGICTEDGGNGIKLIMEFLPSGSLKEYLPK-NK 120
Query: 652 NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711
N ++ + AV + +G+ +L S + DL+ RN+ ++S + +IGD L K I+
Sbjct: 121 NKINLKQQLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177
Query: 712 PSKSTGSLSTVAGS-VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
K ++ S V + PE + +A +V+SFGV L ELLT
Sbjct: 178 TDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 9/163 (5%)
Query: 597 GSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDW 656
G H+ +E+E+ L + N++ Y + YL EYAP GT++ L + D
Sbjct: 52 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDE 109
Query: 657 ASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKST 716
+ +A L++ H S ++ D+ N+ L S E +I D V PS
Sbjct: 110 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRR 165
Query: 717 GSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGK 759
L G++ Y+PPE +++S GV+ E L GK
Sbjct: 166 XXL---CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 9/163 (5%)
Query: 597 GSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDW 656
G H+ +E+E+ L + N++ Y + YL EYAP GT++ L + D
Sbjct: 55 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDE 112
Query: 657 ASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKST 716
+ +A L++ H S ++ D+ N+ L S E +I D S+ T
Sbjct: 113 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 169
Query: 717 GSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGK 759
+ G++ Y+PPE +++S GV+ E L GK
Sbjct: 170 ----DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 12/163 (7%)
Query: 602 FDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYS 661
F E+ VL K + N++ + Y A + ++ +L+ LH +E +
Sbjct: 51 FKNEVGVLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLH-IIETKFEMIKLID 108
Query: 662 IAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGS--L 719
IA AQG+ +LH + I+ DL + NIFL +IGD L + S+ +GS
Sbjct: 109 IARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA--TEKSRWSGSHQF 163
Query: 720 STVAGSVGYIPPEYAYTMR---VTMAGNVYSFGVILLELLTGK 759
++GS+ ++ PE + +VY+FG++L EL+TG+
Sbjct: 164 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 82/195 (42%), Gaps = 9/195 (4%)
Query: 565 KTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYV 624
K +F Y A K+ + ++ + G H+ +E+E+ L + N++ Y
Sbjct: 18 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 77
Query: 625 LASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLL 684
+ YL EYAP GT++ L + D + +A L++ H S ++
Sbjct: 78 HDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCH---SKRVIHR 132
Query: 685 DLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGN 744
D+ N+ L S E +I D S+ T + G++ Y+PPE +
Sbjct: 133 DIKPENLLLGSAGELKIADFGWSVHAPSSRRTD----LCGTLDYLPPEMIEGRMHDEKVD 188
Query: 745 VYSFGVILLELLTGK 759
++S GV+ E L GK
Sbjct: 189 LWSLGVLCYEFLVGK 203
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 89/173 (51%), Gaps = 18/173 (10%)
Query: 600 HKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENA--LDWA 657
+F +E+ ++ L++ N++ Y L + + E+ P G L+ H L+ A + W+
Sbjct: 68 QEFQREVFIMSNLNHPNIVK--LYGLMHNPPRMVMEFVPCGDLY---HRLLDKAHPIKWS 122
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELC-KVIDPSKST 716
+ + + +A G+ ++ + PI+ DL + NIFL+SL E + +C KV D S
Sbjct: 123 VKLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDE----NAPVCAKVADFGLSQ 177
Query: 717 GSLSTVAGSVG---YIPPEY--AYTMRVTMAGNVYSFGVILLELLTGKTAVNQ 764
S+ +V+G +G ++ PE A T + YSF +IL +LTG+ ++
Sbjct: 178 QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 59.7 bits (143), Expect = 7e-09, Method: Composition-based stats.
Identities = 49/204 (24%), Positives = 86/204 (42%), Gaps = 12/204 (5%)
Query: 556 VANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNS 615
+ PL K +F Y A K+ + ++ + G H+ +E+E+ L +
Sbjct: 15 IGRPLG---KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 616 NVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHG 675
N++ Y + YL EYAP GT++ L + D + +A L++ H
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCH- 128
Query: 676 FTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAY 735
S ++ D+ N+ L S E +I + S+ T T+ G++ Y+PPE
Sbjct: 129 --SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRT----TLCGTLDYLPPEMIE 182
Query: 736 TMRVTMAGNVYSFGVILLELLTGK 759
+++S GV+ E L GK
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 110/262 (41%), Gaps = 27/262 (10%)
Query: 570 TYYKAV-MPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD 628
T Y A+ + +G I+++N + Q E+ V+ + N N++ L L D
Sbjct: 35 TVYTAMDVATGQEVAIRQMN----LQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD 90
Query: 629 SAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLST 688
++ EY G+L DV+ E +D ++ Q L FLH SN ++ D+ +
Sbjct: 91 ELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKS 144
Query: 689 RNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSF 748
NI L ++ D C I P +S ST+ G+ ++ PE +++S
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 202
Query: 749 GVILLELLTGK--------------TAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTS 794
G++ +E++ G+ A N EL ++ +D L+ LD +V +
Sbjct: 203 GIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRG 262
Query: 795 LAVRSQMLTVLKVAVACVSVSP 816
A LK+A S++P
Sbjct: 263 SAKELLQHQFLKIAKPLSSLTP 284
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 59.3 bits (142), Expect = 8e-09, Method: Composition-based stats.
Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 12/204 (5%)
Query: 556 VANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNS 615
+ PL K +F Y A K+ + ++ + G H+ +E+E+ L +
Sbjct: 12 IGRPLG---KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 616 NVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHG 675
N++ Y + YL EYAP GT++ L + D + +A L++ H
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCH- 125
Query: 676 FTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAY 735
S ++ D+ N+ L S E +I D S+ T + G++ Y+PPE
Sbjct: 126 --SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----XLCGTLDYLPPEMIE 179
Query: 736 TMRVTMAGNVYSFGVILLELLTGK 759
+++S GV+ E L GK
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 59.3 bits (142), Expect = 8e-09, Method: Composition-based stats.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 12/204 (5%)
Query: 556 VANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNS 615
+ PL K +F Y A K+ + ++ + G H+ +E+E+ L +
Sbjct: 15 IGRPLG---KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 616 NVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHG 675
N++ Y + YL EYAP GT++ L + D + +A L++ H
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCH- 128
Query: 676 FTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAY 735
S ++ D+ N+ L S E +I D V PS L G++ Y+PPE
Sbjct: 129 --SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRDDL---CGTLDYLPPEMIE 182
Query: 736 TMRVTMAGNVYSFGVILLELLTGK 759
+++S GV+ E L GK
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 59.3 bits (142), Expect = 9e-09, Method: Composition-based stats.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 12/204 (5%)
Query: 556 VANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNS 615
+ PL K +F Y A K+ + ++ + G H+ +E+E+ L +
Sbjct: 12 IGRPLG---KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 616 NVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHG 675
N++ Y + YL EYAP GT++ L + D + +A L++ H
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCH- 125
Query: 676 FTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAY 735
S ++ D+ N+ L S E +I D V PS L G++ Y+PPE
Sbjct: 126 --SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRTDL---CGTLDYLPPEMIE 179
Query: 736 TMRVTMAGNVYSFGVILLELLTGK 759
+++S GV+ E L GK
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 12/204 (5%)
Query: 556 VANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNS 615
+ PL K +F Y A K+ + ++ + G H+ +E+E+ L +
Sbjct: 12 IGRPLG---KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 616 NVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHG 675
N++ Y + YL EYAP GT++ L + D + +A L++ H
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCH- 125
Query: 676 FTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAY 735
S ++ D+ N+ L S E +I D V PS L G++ Y+PPE
Sbjct: 126 --SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRXXL---CGTLDYLPPEMIE 179
Query: 736 TMRVTMAGNVYSFGVILLELLTGK 759
+++S GV+ E L GK
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 12/204 (5%)
Query: 556 VANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNS 615
+ PL K +F Y A K+ + ++ + G H+ +E+E+ L +
Sbjct: 15 IGRPLG---KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 616 NVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHG 675
N++ Y + YL EYAP GT++ L + D + +A L++ H
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCH- 128
Query: 676 FTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAY 735
S ++ D+ N+ L S E +I D V PS L G++ Y+PPE
Sbjct: 129 --SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRXXL---CGTLDYLPPEMIE 182
Query: 736 TMRVTMAGNVYSFGVILLELLTGK 759
+++S GV+ E L GK
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 5/160 (3%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S F +E +++ KL + ++ L V++ + Y+ EY KG+L D L AL
Sbjct: 47 SPESFLEEAQIMKKLKHDKLVQ-LYAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLP 105
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG 717
+ +A VA G+A++ + DL + NI + + +I D L ++I+ ++ T
Sbjct: 106 NLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTA 162
Query: 718 SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + PE A R T+ +V+SFG++L EL+T
Sbjct: 163 R-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVT 201
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 12/203 (5%)
Query: 556 VANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNS 615
+ PL K +F Y A K+ + ++ + G H+ +E+E+ L +
Sbjct: 16 IGRPLG---KGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 616 NVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHG 675
N++ Y + YL EYAP GT++ L + D + +A L++ H
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SRFDEQRTATYITELANALSYCH- 129
Query: 676 FTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAY 735
S ++ D+ N+ L S E +I D S+ T T+ G++ Y+PPE
Sbjct: 130 --SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIE 183
Query: 736 TMRVTMAGNVYSFGVILLELLTG 758
+++S GV+ E L G
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S F +E +V+ KL + ++ L V++ + Y+ EY KG+L D L G + L
Sbjct: 45 SPEAFLQEAQVMKKLRHEKLVQ-LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP 103
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG 717
+A +A G+A++ + DL NI + ++ D L ++I+ ++ T
Sbjct: 104 QLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 160
Query: 718 SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + PE A R T+ +V+SFG++L EL T
Sbjct: 161 R-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 199
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S F +E +V+ KL + ++ L V++ + Y+ EY KG+L D L G + L
Sbjct: 47 SPEAFLQEAQVMKKLRHEKLVQ-LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP 105
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG 717
+A +A G+A++ + DL NI + ++ D L ++I+ ++ T
Sbjct: 106 QLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 162
Query: 718 SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + PE A R T+ +V+SFG++L EL T
Sbjct: 163 R-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 201
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S F +E +V+ KL + ++ L V++ + Y+ EY KG+L D L G + L
Sbjct: 56 SPEAFLQEAQVMKKLRHEKLVQ-LYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLP 114
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG 717
+A +A G+A++ + DL NI + ++ D L ++I+ ++ T
Sbjct: 115 QLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTA 171
Query: 718 SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + PE A R T+ +V+SFG++L EL T
Sbjct: 172 R-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 5/160 (3%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S F +E +V+ KL + ++ L V++ + Y+ EY KG+L D L G + L
Sbjct: 56 SPEAFLQEAQVMKKLRHEKLVQ-LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP 114
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG 717
+A +A G+A++ + DL+ NI + ++ D L ++I+ ++ T
Sbjct: 115 QLVDMAAQIASGMAYVERMN---YVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTA 171
Query: 718 SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + PE A R T+ +V+SFG++L EL T
Sbjct: 172 R-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 12/203 (5%)
Query: 556 VANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNS 615
+ PL K +F Y A K+ + ++ + G H+ +E+E+ L +
Sbjct: 16 IGRPLG---KGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 616 NVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHG 675
N++ Y + YL EYAP GT++ L + D + +A L++ H
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SRFDEQRTATYITELANALSYCH- 129
Query: 676 FTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAY 735
S ++ D+ N+ L S E +I D V PS T+ G++ Y+PPE
Sbjct: 130 --SKRVIHRDIKPENLLLGSNGELKIADFGW-SVHAPSSRR---DTLCGTLDYLPPEMIE 183
Query: 736 TMRVTMAGNVYSFGVILLELLTG 758
+++S GV+ E L G
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S F +E +V+ KL + ++ L V++ + Y+ EY KG+L D L G + L
Sbjct: 56 SPEAFLQEAQVMKKLRHEKLVQ-LYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLP 114
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG 717
+A +A G+A++ + DL NI + ++ D L ++I+ ++ T
Sbjct: 115 QLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 171
Query: 718 SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + PE A R T+ +V+SFG++L EL T
Sbjct: 172 R-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 82/196 (41%), Gaps = 13/196 (6%)
Query: 565 KTRFSTYYKAVMPSGMSYFIKKLN--WSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLA 622
K +F Y A S+FI L + +I + G H+ +E+E+ L + N++
Sbjct: 33 KGKFGNVYLAR--EKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 623 YVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPIL 682
Y YL EYAP+G L+ L D +I +A L + HG ++
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKELQKSC--TFDEQRTATIMEELADALMYCHG---KKVI 145
Query: 683 LLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMA 742
D+ N+ L E +I D V PS T+ G++ Y+PPE
Sbjct: 146 HRDIKPENLLLGLKGELKIADFGW-SVHAPSLRR---KTMCGTLDYLPPEMIEGRMHNEK 201
Query: 743 GNVYSFGVILLELLTG 758
+++ GV+ ELL G
Sbjct: 202 VDLWCIGVLCYELLVG 217
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 109/262 (41%), Gaps = 27/262 (10%)
Query: 570 TYYKAV-MPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD 628
T Y A+ + +G I+++N + Q E+ V+ + N N++ L L D
Sbjct: 35 TVYTAMDVATGQEVAIRQMN----LQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD 90
Query: 629 SAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLST 688
++ EY G+L DV+ E +D ++ Q L FLH SN ++ D+ +
Sbjct: 91 ELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKS 144
Query: 689 RNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSF 748
NI L ++ D C I P +S S + G+ ++ PE +++S
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQS--KRSEMVGTPYWMAPEVVTRKAYGPKVDIWSL 202
Query: 749 GVILLELLTGK--------------TAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTS 794
G++ +E++ G+ A N EL ++ +D L+ LD +V +
Sbjct: 203 GIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRG 262
Query: 795 LAVRSQMLTVLKVAVACVSVSP 816
A LK+A S++P
Sbjct: 263 SAKELLQHQFLKIAKPLSSLTP 284
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S F +E +V+ KL + ++ L V++ + Y+ EY KG+L D L G + L
Sbjct: 56 SPEAFLQEAQVMKKLRHEKLVQ-LYAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLP 114
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG 717
+A +A G+A++ + DL NI + ++ D L ++I+ ++ T
Sbjct: 115 QLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 171
Query: 718 SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + PE A R T+ +V+SFG++L EL T
Sbjct: 172 R-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S F +E +V+ KL + ++ L V++ + Y+ EY KG+L D L G + L
Sbjct: 56 SPEAFLQEAQVMKKLRHEKLVQ-LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP 114
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG 717
+A +A G+A++ + DL NI + ++ D L ++I+ ++ T
Sbjct: 115 QLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 171
Query: 718 SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + PE A R T+ +V+SFG++L EL T
Sbjct: 172 R-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 5/160 (3%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S F +E +V+ KL + ++ L V++ + Y+ EY KG L D L G + L
Sbjct: 56 SPEAFLQEAQVMKKLRHEKLVQ-LYAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLP 114
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG 717
+A +A G+A++ + DL NI + ++ D L ++I+ ++ T
Sbjct: 115 QLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 171
Query: 718 SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + PE A R T+ +V+SFG++L EL T
Sbjct: 172 R-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 5/160 (3%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S F +E +V+ KL + ++ L V++ + Y+ EY KG L D L G + L
Sbjct: 56 SPEAFLQEAQVMKKLRHEKLVQ-LYAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLP 114
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG 717
+A +A G+A++ + DL NI + ++ D L ++I+ ++ T
Sbjct: 115 QLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 171
Query: 718 SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + PE A R T+ +V+SFG++L EL T
Sbjct: 172 R-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S F +E +V+ K+ + ++ L V++ + Y+ EY KG+L D L G + L
Sbjct: 56 SPEAFLQEAQVMKKIRHEKLVQ-LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP 114
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG 717
+A +A G+A++ + DL NI + ++ D L ++I+ ++ T
Sbjct: 115 QLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 171
Query: 718 SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + PE A R T+ +V+SFG++L EL T
Sbjct: 172 R-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S F +E +V+ KL + ++ L V++ + Y+ EY KG+L D L G + L
Sbjct: 223 SPEAFLQEAQVMKKLRHEKLVQ-LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP 281
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG 717
+A +A G+A++ + DL NI + ++ D L ++I+ ++ T
Sbjct: 282 QLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTA 338
Query: 718 SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + PE A R T+ +V+SFG++L EL T
Sbjct: 339 R-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 377
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S F +E +V+ KL + ++ L V++ + Y+ EY KG+L D L G L
Sbjct: 305 SPEAFLQEAQVMKKLRHEKLVQ-LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLP 363
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG 717
+A +A G+A++ + DL NI + ++ D L ++I+ ++ T
Sbjct: 364 QLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT- 419
Query: 718 SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + + PE A R T+ +V+SFG++L EL T
Sbjct: 420 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 459
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 5/160 (3%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S F +E +V+ KL + ++ A V++ + Y+ EY KG+L D L G L
Sbjct: 222 SPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLP 280
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG 717
+A +A G+A++ + DL NI + ++ D L ++I+ ++ T
Sbjct: 281 QLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 337
Query: 718 SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + PE A R T+ +V+SFG++L EL T
Sbjct: 338 R-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 5/160 (3%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S F +E +V+ KL + ++ L V++ + Y+ EY KG+L D L G L
Sbjct: 49 SPEAFLQEAQVMKKLRHEKLVQ-LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLP 107
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG 717
+A +A G+A++ + DL NI + ++ D L ++I+ ++ T
Sbjct: 108 QLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 164
Query: 718 SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + PE A R T+ +V+SFG++L EL T
Sbjct: 165 R-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 203
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 5/160 (3%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S F +E +V+ KL + ++ A V++ + Y+ EY KG+L D L G L
Sbjct: 222 SPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLP 280
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG 717
+A +A G+A++ + DL NI + ++ D L ++I+ ++ T
Sbjct: 281 QLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 337
Query: 718 SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + PE A R T+ +V+SFG++L EL T
Sbjct: 338 R-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 109/262 (41%), Gaps = 27/262 (10%)
Query: 570 TYYKAV-MPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD 628
T Y A+ + +G I+++N + Q E+ V+ + N N++ L L D
Sbjct: 36 TVYTAMDVATGQEVAIRQMN----LQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD 91
Query: 629 SAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLST 688
++ EY G+L DV+ E +D ++ Q L FLH SN ++ D+ +
Sbjct: 92 ELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKS 145
Query: 689 RNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSF 748
NI L ++ D C I P +S S + G+ ++ PE +++S
Sbjct: 146 DNILLGMDGSVKLTDFGFCAQITPEQS--KRSXMVGTPYWMAPEVVTRKAYGPKVDIWSL 203
Query: 749 GVILLELLTGK--------------TAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTS 794
G++ +E++ G+ A N EL ++ +D L+ L+ +V +
Sbjct: 204 GIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRG 263
Query: 795 LAVRSQMLTVLKVAVACVSVSP 816
A LK+A S++P
Sbjct: 264 SAKELIQHQFLKIAKPLSSLTP 285
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 109/262 (41%), Gaps = 27/262 (10%)
Query: 570 TYYKAV-MPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD 628
T Y A+ + +G I+++N + Q E+ V+ + N N++ L L D
Sbjct: 35 TVYTAMDVATGQEVAIRQMN----LQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD 90
Query: 629 SAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLST 688
++ EY G+L DV+ E +D ++ Q L FLH SN ++ D+ +
Sbjct: 91 ELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKS 144
Query: 689 RNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSF 748
NI L ++ D C I P +S S + G+ ++ PE +++S
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQS--KRSXMVGTPYWMAPEVVTRKAYGPKVDIWSL 202
Query: 749 GVILLELLTGK--------------TAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTS 794
G++ +E++ G+ A N EL ++ +D L+ L+ +V +
Sbjct: 203 GIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRG 262
Query: 795 LAVRSQMLTVLKVAVACVSVSP 816
A LK+A S++P
Sbjct: 263 SAKELLQHQFLKIAKPLSSLTP 284
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 110/262 (41%), Gaps = 27/262 (10%)
Query: 570 TYYKAV-MPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD 628
T Y A+ + +G I+++N + Q E+ V+ + N N++ L L D
Sbjct: 36 TVYTAMDVATGQEVAIRQMN----LQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD 91
Query: 629 SAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLST 688
++ EY G+L DV+ E +D ++ Q L FLH SN ++ ++ +
Sbjct: 92 ELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLH---SNQVIHRNIKS 145
Query: 689 RNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSF 748
NI L ++ D C I P +S ST+ G+ ++ PE +++S
Sbjct: 146 DNILLGMDGSVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 203
Query: 749 GVILLELLTGK--------------TAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTS 794
G++ +E++ G+ A N EL ++ +D L+ L+ +V +
Sbjct: 204 GIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRG 263
Query: 795 LAVRSQMLTVLKVAVACVSVSP 816
A LK+A S++P
Sbjct: 264 SAKELIQHQFLKIAKPLSSLTP 285
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 5/160 (3%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S F +E +V+ KL + ++ A V++ + Y+ EY KG+L D L G L
Sbjct: 222 SPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLP 280
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG 717
+A +A G+A++ + DL NI + ++ D L ++I+ ++ T
Sbjct: 281 QLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 337
Query: 718 SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + PE A R T+ +V+SFG++L EL T
Sbjct: 338 R-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 79/167 (47%), Gaps = 14/167 (8%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVL--HGCL--ENALDW 656
+F++E+ +LS+ N+++ + D YL EY TL + + HG L + A+++
Sbjct: 57 RFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINF 116
Query: 657 ASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKST 716
++ + A + +H D+ +NI + S K +I D + K + + T
Sbjct: 117 TNQILDGIKHAHDMRIVHR---------DIKPQNILIDSNKTLKIFDFGIAKALSETSLT 167
Query: 717 GSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVN 763
+ + V G+V Y PE A ++YS G++L E+L G+ N
Sbjct: 168 QT-NHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFN 213
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 9/157 (5%)
Query: 602 FDKELEVLGKLSNSNVMTPLAYVLASDSA-YLFYEYAPKGTLFDVLHGCLENALDWASRY 660
F E V+ +L +SN++ L ++ Y+ EY KG+L D L + L
Sbjct: 46 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 105
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
++ V + + +L G N + DL+ RN+ + ++ D L K ++ TG L
Sbjct: 106 KFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL- 161
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
V + PE + + +V+SFG++L E+ +
Sbjct: 162 ----PVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 194
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 5/160 (3%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S F +E +V+ KL + ++ L V++ + Y+ EY KG+L D L G L
Sbjct: 53 SPEAFLQEAQVMKKLRHEKLVQ-LYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLP 111
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG 717
++ +A G+A++ + DL NI + ++ D L ++I+ ++ T
Sbjct: 112 QLVDMSAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTA 168
Query: 718 SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + PE A R T+ +V+SFG++L EL T
Sbjct: 169 R-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 207
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 5/160 (3%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S F +E +V+ KL + ++ L V++ + Y+ EY KG+L D L G L
Sbjct: 53 SPEAFLQEAQVMKKLRHEKLVQ-LYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLP 111
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG 717
++ +A G+A++ + DL NI + ++ D L ++I+ ++ T
Sbjct: 112 QLVDMSAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 168
Query: 718 SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + PE A R T+ +V+SFG++L EL T
Sbjct: 169 R-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 207
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 111/262 (42%), Gaps = 25/262 (9%)
Query: 577 PSG--MSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634
PSG +S +K L D + Q + F +E+ + L + N++ L V+ + +
Sbjct: 42 PSGKTVSVAVKCLK-PDVLSQPEAMDDFIREVNAMHSLDHRNLIR-LYGVVLTPPMKMVT 99
Query: 635 EYAPKGTLFDVLHGCLEN-ALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFL 693
E AP G+L D L + L SRY AV VA+G+ +L S + DL+ RN+ L
Sbjct: 100 ELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLE---SKRFIHRDLAARNLLL 154
Query: 694 KSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSV--GYIPPEYAYTMRVTMAGNVYSFGVI 751
+ +IGD L + + P + V + PE T + A + + FGV
Sbjct: 155 ATRDLVKIGDFGLMRAL-PQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT 213
Query: 752 LLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVAC 811
L E+ T G E W+ N +Q + H +D R + V V C
Sbjct: 214 LWEMFT------YGQE--PWIGLNGSQ---ILHKIDKEGERLPRPEDCPQ-DIYNVMVQC 261
Query: 812 VSVSPEARPKMKSVLRMLLNAR 833
+ PE RP ++ LL A+
Sbjct: 262 WAHKPEDRPTFVALRDFLLEAQ 283
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 5/160 (3%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S F +E +V+ KL + ++ L V++ + + EY KG+L D L G L
Sbjct: 46 SPEAFLQEAQVMKKLRHEKLVQ-LYAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLP 104
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG 717
+A +A G+A++ + DL NI + ++ D L ++I+ ++ T
Sbjct: 105 QLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTA 161
Query: 718 SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + PE A R T+ +V+SFG++L EL T
Sbjct: 162 R-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 200
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 88/197 (44%), Gaps = 25/197 (12%)
Query: 579 GMSYFIKKLNWSDKIFQLGSHHKFD--KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEY 636
G Y IK++N S ++ S + + +E+ VL + + N++ + S Y+ +Y
Sbjct: 49 GRQYVIKEINIS----RMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDY 104
Query: 637 APKGTLFDVLH---GCL---ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
G LF ++ G L + LDW V + L +H IL D+ ++N
Sbjct: 105 CEGGDLFKRINAQKGVLFQEDQILDWF------VQICLALKHVH---DRKILHRDIKSQN 155
Query: 691 IFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA-GSVGYIPPEYAYTMRVTMAGNVYSFG 749
IFL Q+GD + +V++ ST L+ G+ Y+ PE ++++ G
Sbjct: 156 IFLTKDGTVQLGDFGIARVLN---STVELARACIGTPYYLSPEICENKPYNNKSDIWALG 212
Query: 750 VILLELLTGKTAVNQGN 766
+L EL T K A G+
Sbjct: 213 CVLYELCTLKHAFEAGS 229
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 11/166 (6%)
Query: 597 GSHHK--FDKELEVLGKLSNSNVMTPLAYVLASDSA--YLFYEYAPKGTLFDVLHGCLEN 652
G H+ + +E+++L L + +++ + +A L EY P G+L D L +
Sbjct: 73 GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL---PRH 129
Query: 653 ALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDP 712
++ A A + +G+A+LH + + DL+ RN+ L + + +IGD L K +
Sbjct: 130 SIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186
Query: 713 SKSTGSLSTVAGS-VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ S V + PE + A +V+SFGV L ELLT
Sbjct: 187 GHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 111/262 (42%), Gaps = 25/262 (9%)
Query: 577 PSG--MSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634
PSG +S +K L D + Q + F +E+ + L + N++ L V+ + +
Sbjct: 36 PSGKTVSVAVKCLK-PDVLSQPEAMDDFIREVNAMHSLDHRNLIR-LYGVVLTPPMKMVT 93
Query: 635 EYAPKGTLFDVLHGCLEN-ALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFL 693
E AP G+L D L + L SRY AV VA+G+ +L S + DL+ RN+ L
Sbjct: 94 ELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLE---SKRFIHRDLAARNLLL 148
Query: 694 KSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSV--GYIPPEYAYTMRVTMAGNVYSFGVI 751
+ +IGD L + + P + V + PE T + A + + FGV
Sbjct: 149 ATRDLVKIGDFGLMRAL-PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT 207
Query: 752 LLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVAC 811
L E+ T G E W+ N +Q + H +D R + V V C
Sbjct: 208 LWEMFT------YGQE--PWIGLNGSQ---ILHKIDKEGERLPRPEDCPQ-DIYNVMVQC 255
Query: 812 VSVSPEARPKMKSVLRMLLNAR 833
+ PE RP ++ LL A+
Sbjct: 256 WAHKPEDRPTFVALRDFLLEAQ 277
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 10/164 (6%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSA----YLFYEYAPKGTLFDVLHGCLENALDW 656
+F +E + L++ ++ A A A Y+ EY TL D++H E +
Sbjct: 58 RFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVH--TEGPMTP 115
Query: 657 ASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVI-DPSKS 715
+ Q L F H N I+ D+ NI + + ++ D + + I D S
Sbjct: 116 KRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 716 TGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGK 759
+ V G+ Y+ PE A V +VYS G +L E+LTG+
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 111/262 (42%), Gaps = 25/262 (9%)
Query: 577 PSG--MSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634
PSG +S +K L D + Q + F +E+ + L + N++ L V+ + +
Sbjct: 42 PSGKTVSVAVKCLK-PDVLSQPEAMDDFIREVNAMHSLDHRNLIR-LYGVVLTPPMKMVT 99
Query: 635 EYAPKGTLFDVLHGCLEN-ALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFL 693
E AP G+L D L + L SRY AV VA+G+ +L S + DL+ RN+ L
Sbjct: 100 ELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLE---SKRFIHRDLAARNLLL 154
Query: 694 KSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSV--GYIPPEYAYTMRVTMAGNVYSFGVI 751
+ +IGD L + + P + V + PE T + A + + FGV
Sbjct: 155 ATRDLVKIGDFGLMRAL-PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT 213
Query: 752 LLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVAC 811
L E+ T G E W+ N +Q + H +D R + V V C
Sbjct: 214 LWEMFT------YGQE--PWIGLNGSQ---ILHKIDKEGERLPRPEDCPQ-DIYNVMVQC 261
Query: 812 VSVSPEARPKMKSVLRMLLNAR 833
+ PE RP ++ LL A+
Sbjct: 262 WAHKPEDRPTFVALRDFLLEAQ 283
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 9/157 (5%)
Query: 602 FDKELEVLGKLSNSNVMTPLAYVLASDSA-YLFYEYAPKGTLFDVLHGCLENALDWASRY 660
F E V+ +L +SN++ L ++ Y+ EY KG+L D L + L
Sbjct: 61 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 120
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
++ V + + +L G N + DL+ RN+ + ++ D L K ++ TG L
Sbjct: 121 KFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL- 176
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
V + PE + + +V+SFG++L E+ +
Sbjct: 177 ----PVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 6/130 (4%)
Query: 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
Y+ EY TL D++H E + + Q L F H N I+ D+ N
Sbjct: 92 YIVMEYVDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPAN 146
Query: 691 IFLKSLKEPQIGDIELCKVI-DPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFG 749
I + + ++ D + + I D S + V G+ Y+ PE A V +VYS G
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 750 VILLELLTGK 759
+L E+LTG+
Sbjct: 207 CVLYEVLTGE 216
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 6/130 (4%)
Query: 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
Y+ EY TL D++H E + + Q L F H N I+ D+ N
Sbjct: 92 YIVMEYVDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPAN 146
Query: 691 IFLKSLKEPQIGDIELCKVI-DPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFG 749
I + + ++ D + + I D S + V G+ Y+ PE A V +VYS G
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 750 VILLELLTGK 759
+L E+LTG+
Sbjct: 207 CVLYEVLTGE 216
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 95/226 (42%), Gaps = 36/226 (15%)
Query: 560 LNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGK--LSNSNV 617
L ++ + RF +KA + M+ F+ + KIF L + E E+ + + N+
Sbjct: 20 LEIKARGRFGCVWKAQL---MNDFV-----AVKIFPLQDKQSWQSEREIFSTPGMKHENL 71
Query: 618 MTPLAYVLASDSA-------YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGL 670
L ++ A +L + KG+L D L G N + W +A +++GL
Sbjct: 72 ---LQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKG---NIITWNELCHVAETMSRGL 125
Query: 671 AFLH-------GFTSNP-ILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
++LH G P I D ++N+ LKS + D L +P K G
Sbjct: 126 SYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQ 185
Query: 723 AGSVGYIPPEYA-----YTMRVTMAGNVYSFGVILLELLTGKTAVN 763
G+ Y+ PE + + ++Y+ G++L EL++ A +
Sbjct: 186 VGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 111/265 (41%), Gaps = 45/265 (16%)
Query: 584 IKKLNWSDK---IFQLGSHHK---FDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYA 637
+ K W K I Q+ S + F EL L ++++ N++ Y + L EYA
Sbjct: 25 VCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVK--LYGACLNPVCLVMEYA 82
Query: 638 PKGTLFDVLHGC-------LENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
G+L++VLHG +A+ W + S QG+A+LH ++ DL N
Sbjct: 83 EGGSLYNVLHGAEPLPYYTAAHAMSWCLQCS------QGVAYLHSMQPKALIHRDLKPPN 136
Query: 691 IFLKSLKEPQIGDI-ELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFG 749
+ L + G + ++C ++ GS ++ PE + +V+S+G
Sbjct: 137 LLLVAG-----GTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWG 191
Query: 750 VILLELLTGKTAVNQGNELA---KWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLK 806
+IL E++T + ++ A W + N +R L +++ +
Sbjct: 192 IILWEVITRRKPFDEIGGPAFRIMWAVHNG--------------TRPPL-IKNLPKPIES 236
Query: 807 VAVACVSVSPEARPKMKSVLRMLLN 831
+ C S P RP M+ +++++ +
Sbjct: 237 LMTRCWSKDPSQRPSMEEIVKIMTH 261
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 6/130 (4%)
Query: 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
Y+ EY TL D++H E + + Q L F H N I+ D+ N
Sbjct: 92 YIVMEYVDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPAN 146
Query: 691 IFLKSLKEPQIGDIELCKVI-DPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFG 749
I + + ++ D + + I D S + V G+ Y+ PE A V +VYS G
Sbjct: 147 ILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 750 VILLELLTGK 759
+L E+LTG+
Sbjct: 207 CVLYEVLTGE 216
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 6/130 (4%)
Query: 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
Y+ EY TL D++H E + + Q L F H N I+ D+ N
Sbjct: 92 YIVMEYVDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPAN 146
Query: 691 IFLKSLKEPQIGDIELCKVI-DPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFG 749
I + + ++ D + + I D S + V G+ Y+ PE A V +VYS G
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 750 VILLELLTGK 759
+L E+LTG+
Sbjct: 207 CVLYEVLTGE 216
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 102/241 (42%), Gaps = 39/241 (16%)
Query: 602 FDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGC-------LENAL 654
F EL L ++++ N++ Y + L EYA G+L++VLHG +A+
Sbjct: 48 FIVELRQLSRVNHPNIVK--LYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAM 105
Query: 655 DWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDI-ELCKVIDPS 713
W + +QG+A+LH ++ DL N+ L + G + ++C
Sbjct: 106 SW------CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAG-----GTVLKICDFGTAC 154
Query: 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELA---K 770
++ GS ++ PE + +V+S+G+IL E++T + ++ A
Sbjct: 155 DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM 214
Query: 771 WVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLL 830
W + N +R L +++ + + C S P RP M+ +++++
Sbjct: 215 WAVHNG--------------TRPPL-IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMT 259
Query: 831 N 831
+
Sbjct: 260 H 260
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 6/130 (4%)
Query: 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
Y+ EY TL D++H E + + Q L F H N I+ D+ N
Sbjct: 109 YIVMEYVDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPAN 163
Query: 691 IFLKSLKEPQIGDIELCKVI-DPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFG 749
I + + ++ D + + I D S + V G+ Y+ PE A V +VYS G
Sbjct: 164 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 223
Query: 750 VILLELLTGK 759
+L E+LTG+
Sbjct: 224 CVLYEVLTGE 233
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 19/167 (11%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCL---ENALDWASRY 660
+E ++ L + N++ L + L E+A G L VL G + ++WA
Sbjct: 55 QEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWA--- 111
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDI--ELCKVID-----PS 713
V +A+G+ +LH PI+ DL + NI + L++ + GD+ ++ K+ D
Sbjct: 112 ---VQIARGMNYLHDEAIVPIIHRDLKSSNILI--LQKVENGDLSNKILKITDFGLAREW 166
Query: 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKT 760
T +S AG+ ++ PE + +V+S+GV+L ELLTG+
Sbjct: 167 HRTTKMSA-AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEV 212
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 9/157 (5%)
Query: 602 FDKELEVLGKLSNSNVMTPLAYVLASDSA-YLFYEYAPKGTLFDVLHGCLENALDWASRY 660
F E V+ +L +SN++ L ++ Y+ EY KG+L D L + L
Sbjct: 233 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 292
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
++ V + + +L G N + DL+ RN+ + ++ D L K ++ TG L
Sbjct: 293 KFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL- 348
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
V + PE + + +V+SFG++L E+ +
Sbjct: 349 ----PVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 381
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 9/157 (5%)
Query: 602 FDKELEVLGKLSNSNVMTPLAYVLASDSA-YLFYEYAPKGTLFDVLHGCLENALDWASRY 660
F E V+ +L +SN++ L ++ Y+ EY KG+L D L + L
Sbjct: 52 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 111
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
++ V + + +L G N + DL+ RN+ + ++ D L K ++ TG L
Sbjct: 112 KFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL- 167
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
V + PE + +V+SFG++L E+ +
Sbjct: 168 ----PVKWTAPEALREAAFSTKSDVWSFGILLWEIYS 200
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 9/159 (5%)
Query: 602 FDKELEVLGKLSNSNVMTPLAYV--LASDSAYLFYEYAPKGTLFDVLHGCLENALDWASR 659
+ +E+E+L L + +++ S L EY P G+L D L + + A
Sbjct: 57 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHCVGLAQL 113
Query: 660 YSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSL 719
A + +G+A+LH + + L+ RN+ L + + +IGD L K + +
Sbjct: 114 LLFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV 170
Query: 720 STVAGS-VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
S V + PE + A +V+SFGV L ELLT
Sbjct: 171 REDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 9/159 (5%)
Query: 602 FDKELEVLGKLSNSNVMTPLAYV--LASDSAYLFYEYAPKGTLFDVLHGCLENALDWASR 659
+ +E+E+L L + +++ S L EY P G+L D L + + A
Sbjct: 58 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHCVGLAQL 114
Query: 660 YSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSL 719
A + +G+A+LH + + L+ RN+ L + + +IGD L K + +
Sbjct: 115 LLFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV 171
Query: 720 STVAGS-VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
S V + PE + A +V+SFGV L ELLT
Sbjct: 172 REDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 7/142 (4%)
Query: 626 ASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLD 685
++ + EY G L + C + L A+ Y A + GL FLH S I+ D
Sbjct: 89 TKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFY--AAEIILGLQFLH---SKGIVYRD 143
Query: 686 LSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNV 745
L NI L +I D +CK + + G+ YI PE + + +
Sbjct: 144 LKLDNILLDKDGHIKIADFGMCK--ENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDW 201
Query: 746 YSFGVILLELLTGKTAVNQGNE 767
+SFGV+L E+L G++ + +E
Sbjct: 202 WSFGVLLYEMLIGQSPFHGQDE 223
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 596 LGSHHK--FDKELEVLGKLSNSNVMTPLAYV--LASDSAYLFYEYAPKGTLFDVLHGCLE 651
G H+ + +E+++L L + +++ S L EY P G+L D L
Sbjct: 55 CGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PR 111
Query: 652 NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711
+++ A A + +G+A+LH S + +L+ RN+ L + + +IGD L K +
Sbjct: 112 HSIGLAQLLLFAQQICEGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVP 168
Query: 712 PSKSTGSLSTVAGS-VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ S V + PE + A +V+SFGV L ELLT
Sbjct: 169 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 7/142 (4%)
Query: 626 ASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLD 685
++ + EY G L + C + L A+ Y A + GL FLH S I+ D
Sbjct: 90 TKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFY--AAEIILGLQFLH---SKGIVYRD 144
Query: 686 LSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNV 745
L NI L +I D +CK + + G+ YI PE + + +
Sbjct: 145 LKLDNILLDKDGHIKIADFGMCK--ENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDW 202
Query: 746 YSFGVILLELLTGKTAVNQGNE 767
+SFGV+L E+L G++ + +E
Sbjct: 203 WSFGVLLYEMLIGQSPFHGQDE 224
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 31/174 (17%)
Query: 612 LSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY-SIAVGVAQGL 670
L N + P+ V + ++ EY GTL+D++H EN Y + + + L
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHS--ENLNQQRDEYWRLFRQILEAL 129
Query: 671 AFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS------------KSTGS 718
+++H S I+ DL NIF+ + +IGD L K + S S+ +
Sbjct: 130 SYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 719 LSTVAGSVGYIPPEY-----AYTMRVTMAGNVYSFGVILLELL----TGKTAVN 763
L++ G+ Y+ E Y ++ M YS G+I E++ TG VN
Sbjct: 187 LTSAIGTAMYVATEVLDGTGHYNEKIDM----YSLGIIFFEMIYPFSTGMERVN 236
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 71/262 (27%), Positives = 110/262 (41%), Gaps = 25/262 (9%)
Query: 577 PSG--MSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634
PSG +S +K L D + Q + F +E+ + L + N++ VL + +
Sbjct: 32 PSGKTVSVAVKCLK-PDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVT 89
Query: 635 EYAPKGTLFDVLHGCLEN-ALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFL 693
E AP G+L D L + L SRY AV VA+G+ +L S + DL+ RN+ L
Sbjct: 90 ELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLE---SKRFIHRDLAARNLLL 144
Query: 694 KSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSV--GYIPPEYAYTMRVTMAGNVYSFGVI 751
+ +IGD L + + P + V + PE T + A + + FGV
Sbjct: 145 ATRDLVKIGDFGLMRAL-PQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT 203
Query: 752 LLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVAC 811
L E+ T G E W+ N +Q + H +D R + V V C
Sbjct: 204 LWEMFT------YGQE--PWIGLNGSQ---ILHKIDKEGERLPRPEDCPQ-DIYNVMVQC 251
Query: 812 VSVSPEARPKMKSVLRMLLNAR 833
+ PE RP ++ LL A+
Sbjct: 252 WAHKPEDRPTFVALRDFLLEAQ 273
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 94/222 (42%), Gaps = 29/222 (13%)
Query: 560 LNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEV--LGKLSNSNV 617
L V+ + RF +KA + ++ ++ + KIF + + E EV L + + N+
Sbjct: 29 LEVKARGRFGCVWKAQL---LNEYV-----AVKIFPIQDKQSWQNEYEVYSLPGMKHENI 80
Query: 618 MTPLAYVLASDSA----YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFL 673
+ + S +L + KG+L D L N + W IA +A+GLA+L
Sbjct: 81 LQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA---NVVSWNELCHIAETMARGLAYL 137
Query: 674 H----GFTSN---PILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSV 726
H G I D+ ++N+ LK+ I D L + KS G G+
Sbjct: 138 HEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTR 197
Query: 727 GYIPPEYA-----YTMRVTMAGNVYSFGVILLELLTGKTAVN 763
Y+ PE + + ++Y+ G++L EL + TA +
Sbjct: 198 RYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 114/281 (40%), Gaps = 54/281 (19%)
Query: 568 FSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVM-------- 618
F +KA G +Y IK++ ++++ K ++E++ L KL + N++
Sbjct: 24 FGQVFKAKHRIDGKTYVIKRVKYNNE--------KAEREVKALAKLDHVNIVHYNGCWDG 75
Query: 619 ------TPLAYVLASDSAYLF--YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGL 670
T S + LF E+ KGTL + LD + + +G+
Sbjct: 76 FDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGV 135
Query: 671 AFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIP 730
++H S ++ DL NIFL K+ +IGD L + K+ G G++ Y+
Sbjct: 136 DYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGL---VTSLKNDGKRXRSKGTLRYMS 189
Query: 731 PEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWV--LRNSAQQDKLDHILDF 788
PE + ++Y+ G+IL ELL + E +K+ LR+ D D
Sbjct: 190 PEQISSQDYGKEVDLYALGLILAELL---HVCDTAFETSKFFTDLRDGIISDIFD----- 241
Query: 789 NVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRML 829
+ T+L+ +S PE RP +LR L
Sbjct: 242 ----------KKEKTLLQ---KLLSKKPEDRPNTSEILRTL 269
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 71/262 (27%), Positives = 110/262 (41%), Gaps = 25/262 (9%)
Query: 577 PSG--MSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634
PSG +S +K L D + Q + F +E+ + L + N++ VL + +
Sbjct: 36 PSGKTVSVAVKCLK-PDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVT 93
Query: 635 EYAPKGTLFDVLHGCLEN-ALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFL 693
E AP G+L D L + L SRY AV VA+G+ +L S + DL+ RN+ L
Sbjct: 94 ELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLE---SKRFIHRDLAARNLLL 148
Query: 694 KSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSV--GYIPPEYAYTMRVTMAGNVYSFGVI 751
+ +IGD L + + P + V + PE T + A + + FGV
Sbjct: 149 ATRDLVKIGDFGLMRAL-PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT 207
Query: 752 LLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVAC 811
L E+ T G E W+ N +Q + H +D R + V V C
Sbjct: 208 LWEMFT------YGQE--PWIGLNGSQ---ILHKIDKEGERLPRPEDCPQ-DIYNVMVQC 255
Query: 812 VSVSPEARPKMKSVLRMLLNAR 833
+ PE RP ++ LL A+
Sbjct: 256 WAHKPEDRPTFVALRDFLLEAQ 277
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 71/262 (27%), Positives = 110/262 (41%), Gaps = 25/262 (9%)
Query: 577 PSG--MSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634
PSG +S +K L D + Q + F +E+ + L + N++ VL + +
Sbjct: 32 PSGKTVSVAVKCLK-PDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVT 89
Query: 635 EYAPKGTLFDVLHGCLEN-ALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFL 693
E AP G+L D L + L SRY AV VA+G+ +L S + DL+ RN+ L
Sbjct: 90 ELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLE---SKRFIHRDLAARNLLL 144
Query: 694 KSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSV--GYIPPEYAYTMRVTMAGNVYSFGVI 751
+ +IGD L + + P + V + PE T + A + + FGV
Sbjct: 145 ATRDLVKIGDFGLMRAL-PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT 203
Query: 752 LLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVAC 811
L E+ T G E W+ N +Q + H +D R + V V C
Sbjct: 204 LWEMFT------YGQE--PWIGLNGSQ---ILHKIDKEGERLPRPEDCPQ-DIYNVMVQC 251
Query: 812 VSVSPEARPKMKSVLRMLLNAR 833
+ PE RP ++ LL A+
Sbjct: 252 WAHKPEDRPTFVALRDFLLEAQ 273
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 71/262 (27%), Positives = 110/262 (41%), Gaps = 25/262 (9%)
Query: 577 PSG--MSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634
PSG +S +K L D + Q + F +E+ + L + N++ VL + +
Sbjct: 32 PSGKTVSVAVKCLK-PDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVT 89
Query: 635 EYAPKGTLFDVLHGCLEN-ALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFL 693
E AP G+L D L + L SRY AV VA+G+ +L S + DL+ RN+ L
Sbjct: 90 ELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLE---SKRFIHRDLAARNLLL 144
Query: 694 KSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSV--GYIPPEYAYTMRVTMAGNVYSFGVI 751
+ +IGD L + + P + V + PE T + A + + FGV
Sbjct: 145 ATRDLVKIGDFGLMRAL-PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT 203
Query: 752 LLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVAC 811
L E+ T G E W+ N +Q + H +D R + V V C
Sbjct: 204 LWEMFT------YGQE--PWIGLNGSQ---ILHKIDKEGERLPRPEDCPQ-DIYNVMVQC 251
Query: 812 VSVSPEARPKMKSVLRMLLNAR 833
+ PE RP ++ LL A+
Sbjct: 252 WAHKPEDRPTFVALRDFLLEAQ 273
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 98/250 (39%), Gaps = 38/250 (15%)
Query: 602 FDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVL------------HGC 649
F +E ++ + N N++ L L +EY G L + L H
Sbjct: 97 FQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSD 156
Query: 650 LEN----------ALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEP 699
L L A + IA VA G+A+L + + DL+TRN +
Sbjct: 157 LSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVV 213
Query: 700 QIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGK 759
+I D L + I + + A + ++PPE + R T +V+++GV+L E+ +
Sbjct: 214 KIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYG 273
Query: 760 TAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEAR 819
G A ++ + ++ D N+ ++ ++++ C S P R
Sbjct: 274 LQPYYG----------MAHEEVIYYVRDGNILACPENCPLELYNLMRL---CWSKLPADR 320
Query: 820 PKMKSVLRML 829
P S+ R+L
Sbjct: 321 PSFCSIHRIL 330
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 596 LGSHHK--FDKELEVLGKLSNSNVMTPLAYV--LASDSAYLFYEYAPKGTLFDVLHGCLE 651
G H+ + +E+++L L + +++ S L EY P G+L D L
Sbjct: 55 CGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PR 111
Query: 652 NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711
+++ A A + +G+A+LH + + +L+ RN+ L + + +IGD L K +
Sbjct: 112 HSIGLAQLLLFAQQICEGMAYLH---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVP 168
Query: 712 PSKSTGSLSTVAGS-VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ S V + PE + A +V+SFGV L ELLT
Sbjct: 169 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 86/195 (44%), Gaps = 10/195 (5%)
Query: 1 MQSCGGIDGLKLLNFSKNELVSLPTFNGFAGLEVLDFSSNNLNGNINLQFDELVXXXXXX 60
+ + G+ L+ LNFS N++ L LE LD SSN + +I++ +L
Sbjct: 144 ISALSGLTSLQQLNFSSNQVTDLKPLANLTTLERLDISSNKV-SDISV-LAKLTNLESLI 201
Query: 61 XXXXXXXGFLPINLGKTKALEELVLSGNAFHGEIPKGIADYRNLTLIDLSANNLSGSVPD 120
P LG L+EL L+GN +A NLT +DL+ N +S P
Sbjct: 202 ATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP- 256
Query: 121 RIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQNKFSGSVPGGITRFLRNLDLS 180
+ L+KL L L AN + P LA +T L+ N+N+ P + L L L
Sbjct: 257 -LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISPISNLKNLTYLTLY 313
Query: 181 YNKLLGVIPIDLLSH 195
+N + + P+ L+
Sbjct: 314 FNNISDISPVSSLTK 328
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 122/255 (47%), Gaps = 21/255 (8%)
Query: 80 LEELVLSGNAFHGEIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLD 139
L +++++ N P +A+ NLT + L N ++ P + L+ L L LS+N +
Sbjct: 87 LVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTIS 142
Query: 140 GRLPTSLASITTLSRFAANQNKFSGSVPGGITRFLRNLDLSYNKLLGVIPIDLLSHPNLQ 199
++L+ +T+L + + N+ + P L LD+S NK+ + + L+ NL+
Sbjct: 143 DI--SALSGLTSLQQLNFSSNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT--NLE 198
Query: 200 TIDLSVNMLEGSLPQNMSPNLVRLRLGTNLL--IGEIPSATFTSLEKLTYLELDNNSFTG 257
++ + N + P + NL L L N L IG T SL LT L+L NN +
Sbjct: 199 SLIATNNQISDITPLGILTNLDELSLNGNQLKDIG-----TLASLTNLTDLDLANNQISN 253
Query: 258 MIPQQLGSCRSLTLLNLAQNELNGSLPIQLGSLGILQVMNLQLNKLSGEIPSQFSQLKLL 317
+ P L LT L L N+++ P+ G+ + NL+LN+ E S S LK L
Sbjct: 254 LAP--LSGLTKLTELKLGANQISNISPLA----GLTALTNLELNENQLEDISPISNLKNL 307
Query: 318 STMNISWNSLSGSIP 332
+ + + +N++S P
Sbjct: 308 TYLTLYFNNISDISP 322
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 63/165 (38%), Gaps = 7/165 (4%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSA-YLFYEYAPKGTLFDVLHGCLENALDWASRYSI 662
+E +V+ +L + L + D Y YA G L + + D
Sbjct: 81 RERDVMSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKI--GSFDETCTRFY 137
Query: 663 AVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
+ L +LHG I+ DL NI L QI D KV+ P ++
Sbjct: 138 TAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 194
Query: 723 AGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNE 767
G+ Y+ PE + + ++++ G I+ +L+ G GNE
Sbjct: 195 VGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 62/165 (37%), Gaps = 7/165 (4%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSA-YLFYEYAPKGTLFDVLHGCLENALDWASRYSI 662
+E +V+ +L + L + D Y YA G L + + D
Sbjct: 82 RERDVMSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 138
Query: 663 AVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
+ L +LHG I+ DL NI L QI D KV+ P ++
Sbjct: 139 TAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 195
Query: 723 AGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNE 767
G+ Y+ PE + ++++ G I+ +L+ G GNE
Sbjct: 196 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 240
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 61/165 (36%), Gaps = 7/165 (4%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSA-YLFYEYAPKGTLFDVLHGCLENALDWASRYSI 662
+E +V+ +L + L + D Y YA G L + + D
Sbjct: 57 RERDVMSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 113
Query: 663 AVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
+ L +LHG I+ DL NI L QI D KV+ P +
Sbjct: 114 TAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 170
Query: 723 AGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNE 767
G+ Y+ PE + ++++ G I+ +L+ G GNE
Sbjct: 171 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 215
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 62/165 (37%), Gaps = 7/165 (4%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSA-YLFYEYAPKGTLFDVLHGCLENALDWASRYSI 662
+E +V+ +L + L + D Y YA G L + + D
Sbjct: 78 RERDVMSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 134
Query: 663 AVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
+ L +LHG I+ DL NI L QI D KV+ P ++
Sbjct: 135 TAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 191
Query: 723 AGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNE 767
G+ Y+ PE + ++++ G I+ +L+ G GNE
Sbjct: 192 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 236
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 61/165 (36%), Gaps = 7/165 (4%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSA-YLFYEYAPKGTLFDVLHGCLENALDWASRYSI 662
+E +V+ +L + L + D Y YA G L + + D
Sbjct: 59 RERDVMSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 115
Query: 663 AVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
+ L +LHG I+ DL NI L QI D KV+ P +
Sbjct: 116 TAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 172
Query: 723 AGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNE 767
G+ Y+ PE + ++++ G I+ +L+ G GNE
Sbjct: 173 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 217
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 13/164 (7%)
Query: 597 GSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVL--HGCLENAL 654
G H+ +E+E+ L + N++ Y YL E+AP+G L+ L HG
Sbjct: 57 GVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG----RF 112
Query: 655 DWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714
D + +A L + H ++ D+ N+ + E +I D V PS
Sbjct: 113 DEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWS-VHAPSL 168
Query: 715 STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 758
+ G++ Y+PPE +++ GV+ E L G
Sbjct: 169 RR---RXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 61/165 (36%), Gaps = 7/165 (4%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSA-YLFYEYAPKGTLFDVLHGCLENALDWASRYSI 662
+E +V+ +L + L + D Y YA G L + + D
Sbjct: 56 RERDVMSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 112
Query: 663 AVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
+ L +LHG I+ DL NI L QI D KV+ P +
Sbjct: 113 TAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 169
Query: 723 AGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNE 767
G+ Y+ PE + ++++ G I+ +L+ G GNE
Sbjct: 170 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 214
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 13/164 (7%)
Query: 597 GSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVL--HGCLENAL 654
G H+ +E+E+ L + N++ Y YL E+AP+G L+ L HG
Sbjct: 56 GVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG----RF 111
Query: 655 DWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714
D + +A L + H ++ D+ N+ + E +I D V PS
Sbjct: 112 DEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWS-VHAPSL 167
Query: 715 STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 758
+ G++ Y+PPE +++ GV+ E L G
Sbjct: 168 RR---RXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 61/165 (36%), Gaps = 7/165 (4%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSA-YLFYEYAPKGTLFDVLHGCLENALDWASRYSI 662
+E +V+ +L + L + D Y YA G L + + D
Sbjct: 58 RERDVMSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 114
Query: 663 AVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
+ L +LHG I+ DL NI L QI D KV+ P +
Sbjct: 115 TAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 171
Query: 723 AGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNE 767
G+ Y+ PE + ++++ G I+ +L+ G GNE
Sbjct: 172 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 216
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 10/195 (5%)
Query: 1 MQSCGGIDGLKLLNFSKNELVSLPTFNGFAGLEVLDFSSNNLNGNINLQFDELVXXXXXX 60
+ + G+ L+ L+FS N++ L LE LD SSN + +I++ +L
Sbjct: 144 ISALSGLTSLQQLSFSSNQVTDLKPLANLTTLERLDISSNKV-SDISV-LAKLTNLESLI 201
Query: 61 XXXXXXXGFLPINLGKTKALEELVLSGNAFHGEIPKGIADYRNLTLIDLSANNLSGSVPD 120
P LG L+EL L+GN +A NLT +DL+ N +S P
Sbjct: 202 ATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP- 256
Query: 121 RIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQNKFSGSVPGGITRFLRNLDLS 180
+ L+KL L L AN + P LA +T L+ N+N+ P + L L L
Sbjct: 257 -LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISPISNLKNLTYLTLY 313
Query: 181 YNKLLGVIPIDLLSH 195
+N + + P+ L+
Sbjct: 314 FNNISDISPVSSLTK 328
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 123/255 (48%), Gaps = 21/255 (8%)
Query: 80 LEELVLSGNAFHGEIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLD 139
L +++++ N P +A+ NLT + L N ++ P + L+ L L LS+N +
Sbjct: 87 LVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTIS 142
Query: 140 GRLPTSLASITTLSRFAANQNKFSGSVPGGITRFLRNLDLSYNKLLGVIPIDLLSHPNLQ 199
++L+ +T+L + + + N+ + P L LD+S NK+ + + L+ NL+
Sbjct: 143 DI--SALSGLTSLQQLSFSSNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT--NLE 198
Query: 200 TIDLSVNMLEGSLPQNMSPNLVRLRLGTNLL--IGEIPSATFTSLEKLTYLELDNNSFTG 257
++ + N + P + NL L L N L IG T SL LT L+L NN +
Sbjct: 199 SLIATNNQISDITPLGILTNLDELSLNGNQLKDIG-----TLASLTNLTDLDLANNQISN 253
Query: 258 MIPQQLGSCRSLTLLNLAQNELNGSLPIQLGSLGILQVMNLQLNKLSGEIPSQFSQLKLL 317
+ P L LT L L N+++ P+ G+ + NL+LN+ E S S LK L
Sbjct: 254 LAP--LSGLTKLTELKLGANQISNISPLA----GLTALTNLELNENQLEDISPISNLKNL 307
Query: 318 STMNISWNSLSGSIP 332
+ + + +N++S P
Sbjct: 308 TYLTLYFNNISDISP 322
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 13/164 (7%)
Query: 597 GSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVL--HGCLENAL 654
G H+ +E+E+ L + N++ Y YL E+AP+G L+ L HG
Sbjct: 56 GVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG----RF 111
Query: 655 DWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714
D + +A L + H ++ D+ N+ + E +I D V PS
Sbjct: 112 DEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWS-VHAPSL 167
Query: 715 STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 758
+ G++ Y+PPE +++ GV+ E L G
Sbjct: 168 RR---RXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 79/181 (43%), Gaps = 33/181 (18%)
Query: 598 SHHKFDKELEVLGKLSNS-NVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHG--CLENAL 654
H F ELEVL KL + N++ L YL EYAP G L D L LE
Sbjct: 68 DHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDP 127
Query: 655 DWASRYS------------IAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIG 702
+A S A VA+G+ +L + + DL+ RNI +G
Sbjct: 128 AFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNIL--------VG 176
Query: 703 DIELCKVIDPSKSTGSLSTVAGSVGYIPPEYA------YTMRVTMAGNVYSFGVILLELL 756
+ + K+ D S G V ++G +P + Y++ T + +V+S+GV+L E++
Sbjct: 177 ENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNS-DVWSYGVLLWEIV 235
Query: 757 T 757
+
Sbjct: 236 S 236
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 61/165 (36%), Gaps = 7/165 (4%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSA-YLFYEYAPKGTLFDVLHGCLENALDWASRYSI 662
+E +V+ +L + L + D Y YA G L + + D
Sbjct: 79 RERDVMSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 135
Query: 663 AVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
+ L +LHG I+ DL NI L QI D KV+ P +
Sbjct: 136 TAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 723 AGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNE 767
G+ Y+ PE + ++++ G I+ +L+ G GNE
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 61/165 (36%), Gaps = 7/165 (4%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSA-YLFYEYAPKGTLFDVLHGCLENALDWASRYSI 662
+E +V+ +L + L + D Y YA G L + + D
Sbjct: 79 RERDVMSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 135
Query: 663 AVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
+ L +LHG I+ DL NI L QI D KV+ P +
Sbjct: 136 TAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAF 192
Query: 723 AGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNE 767
G+ Y+ PE + ++++ G I+ +L+ G GNE
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 10/195 (5%)
Query: 1 MQSCGGIDGLKLLNFSKNELVSLPTFNGFAGLEVLDFSSNNLNGNINLQFDELVXXXXXX 60
+ + G+ L+ L+FS N++ L LE LD SSN + +I++ +L
Sbjct: 144 ISALSGLTSLQQLSFSSNQVTDLKPLANLTTLERLDISSNKV-SDISV-LAKLTNLESLI 201
Query: 61 XXXXXXXGFLPINLGKTKALEELVLSGNAFHGEIPKGIADYRNLTLIDLSANNLSGSVPD 120
P LG L+EL L+GN +A NLT +DL+ N +S P
Sbjct: 202 ATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP- 256
Query: 121 RIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQNKFSGSVPGGITRFLRNLDLS 180
+ L+KL L L AN + P LA +T L+ N+N+ P + L L L
Sbjct: 257 -LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISPISNLKNLTYLTLY 313
Query: 181 YNKLLGVIPIDLLSH 195
+N + + P+ L+
Sbjct: 314 FNNISDISPVSSLTK 328
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 123/255 (48%), Gaps = 21/255 (8%)
Query: 80 LEELVLSGNAFHGEIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLD 139
L +++++ N P +A+ NLT + L N ++ P + L+ L L LS+N +
Sbjct: 87 LVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTIS 142
Query: 140 GRLPTSLASITTLSRFAANQNKFSGSVPGGITRFLRNLDLSYNKLLGVIPIDLLSHPNLQ 199
++L+ +T+L + + + N+ + P L LD+S NK+ + + L+ NL+
Sbjct: 143 DI--SALSGLTSLQQLSFSSNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT--NLE 198
Query: 200 TIDLSVNMLEGSLPQNMSPNLVRLRLGTNLL--IGEIPSATFTSLEKLTYLELDNNSFTG 257
++ + N + P + NL L L N L IG T SL LT L+L NN +
Sbjct: 199 SLIATNNQISDITPLGILTNLDELSLNGNQLKDIG-----TLASLTNLTDLDLANNQISN 253
Query: 258 MIPQQLGSCRSLTLLNLAQNELNGSLPIQLGSLGILQVMNLQLNKLSGEIPSQFSQLKLL 317
+ P L LT L L N+++ P+ G+ + NL+LN+ E S S LK L
Sbjct: 254 LAP--LSGLTKLTELKLGANQISNISPLA----GLTALTNLELNENQLEDISPISNLKNL 307
Query: 318 STMNISWNSLSGSIP 332
+ + + +N++S P
Sbjct: 308 TYLTLYFNNISDISP 322
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 61/165 (36%), Gaps = 7/165 (4%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSA-YLFYEYAPKGTLFDVLHGCLENALDWASRYSI 662
+E +V+ +L + L + D Y YA G L + + D
Sbjct: 81 RERDVMSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 137
Query: 663 AVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
+ L +LHG I+ DL NI L QI D KV+ P +
Sbjct: 138 TAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 723 AGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNE 767
G+ Y+ PE + ++++ G I+ +L+ G GNE
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 61/165 (36%), Gaps = 7/165 (4%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSA-YLFYEYAPKGTLFDVLHGCLENALDWASRYSI 662
+E +V+ +L + L + D Y YA G L + + D
Sbjct: 86 RERDVMSRLDHP-FFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 142
Query: 663 AVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
+ L +LHG I+ DL NI L QI D KV+ P +
Sbjct: 143 TAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 199
Query: 723 AGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNE 767
G+ Y+ PE + ++++ G I+ +L+ G GNE
Sbjct: 200 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 244
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 61/165 (36%), Gaps = 7/165 (4%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSA-YLFYEYAPKGTLFDVLHGCLENALDWASRYSI 662
+E +V+ +L + L + D Y YA G L + + D
Sbjct: 79 RERDVMSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 135
Query: 663 AVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
+ L +LHG I+ DL NI L QI D KV+ P +
Sbjct: 136 TAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 723 AGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNE 767
G+ Y+ PE + ++++ G I+ +L+ G GNE
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 61/165 (36%), Gaps = 7/165 (4%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSA-YLFYEYAPKGTLFDVLHGCLENALDWASRYSI 662
+E +V+ +L + L + D Y YA G L + + D
Sbjct: 81 RERDVMSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 137
Query: 663 AVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
+ L +LHG I+ DL NI L QI D KV+ P +
Sbjct: 138 TAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 723 AGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNE 767
G+ Y+ PE + ++++ G I+ +L+ G GNE
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 82/197 (41%), Gaps = 29/197 (14%)
Query: 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLK 694
E+ KGTL + LD + + +G+ ++H S ++ DL NIFL
Sbjct: 114 EFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLV 170
Query: 695 SLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLE 754
K+ +IGD L + K+ G + G++ Y+ PE + ++Y+ G+IL E
Sbjct: 171 DTKQVKIGDFGLVTSL---KNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAE 227
Query: 755 LLTGKTAVNQGNELAKWV--LRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACV 812
LL + E +K+ LR+ D D + T+L+ +
Sbjct: 228 LL---HVCDTAFETSKFFTDLRDGIISDIFD---------------KKEKTLLQ---KLL 266
Query: 813 SVSPEARPKMKSVLRML 829
S PE RP +LR L
Sbjct: 267 SKKPEDRPNTSEILRTL 283
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 61/165 (36%), Gaps = 7/165 (4%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSA-YLFYEYAPKGTLFDVLHGCLENALDWASRYSI 662
+E +V+ +L + L + D Y YA G L + + D
Sbjct: 81 RERDVMSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 137
Query: 663 AVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
+ L +LHG I+ DL NI L QI D KV+ P +
Sbjct: 138 TAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 723 AGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNE 767
G+ Y+ PE + ++++ G I+ +L+ G GNE
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 31/174 (17%)
Query: 612 LSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY-SIAVGVAQGL 670
L N + P+ V + ++ EY TL+D++H EN Y + + + L
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHS--ENLNQQRDEYWRLFRQILEAL 129
Query: 671 AFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS------------KSTGS 718
+++H S I+ DL NIF+ + +IGD L K + S S+ +
Sbjct: 130 SYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 719 LSTVAGSVGYIPPEY-----AYTMRVTMAGNVYSFGVILLELL----TGKTAVN 763
L++ G+ Y+ E Y ++ M YS G+I E++ TG VN
Sbjct: 187 LTSAIGTAMYVATEVLDGTGHYNEKIDM----YSLGIIFFEMIYPFSTGMERVN 236
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 61/165 (36%), Gaps = 7/165 (4%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSA-YLFYEYAPKGTLFDVLHGCLENALDWASRYSI 662
+E +V+ +L + L + D Y YA G L + + D
Sbjct: 82 RERDVMSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 138
Query: 663 AVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
+ L +LHG I+ DL NI L QI D KV+ P +
Sbjct: 139 TAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 195
Query: 723 AGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNE 767
G+ Y+ PE + ++++ G I+ +L+ G GNE
Sbjct: 196 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 240
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 61/165 (36%), Gaps = 7/165 (4%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSA-YLFYEYAPKGTLFDVLHGCLENALDWASRYSI 662
+E +V+ +L + L + D Y YA G L + + D
Sbjct: 79 RERDVMSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 135
Query: 663 AVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
+ L +LHG I+ DL NI L QI D KV+ P +
Sbjct: 136 TAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 723 AGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNE 767
G+ Y+ PE + ++++ G I+ +L+ G GNE
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 94/233 (40%), Gaps = 28/233 (12%)
Query: 544 RSNIDFTKAMEAVANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQL------- 596
R N+ F ++A K S Y+ V G + + L DK+ +
Sbjct: 11 RENLYFQGDLQATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKII 70
Query: 597 -------GSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFD-VLHG 648
S+ K +E+ VL L + N+M + + YL E G LFD ++H
Sbjct: 71 RKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHR 130
Query: 649 CLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEP---QIGDIE 705
N +D A I V G+ +LH + I+ DL N+ L+S ++ +I D
Sbjct: 131 MKFNEVDAA---VIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFG 184
Query: 706 LCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 758
L V + K + G+ YI PE + +V+S GVIL LL G
Sbjct: 185 LSAVFENQK---KMKERLGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAG 233
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 61/165 (36%), Gaps = 7/165 (4%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSA-YLFYEYAPKGTLFDVLHGCLENALDWASRYSI 662
+E +V+ +L + L + D Y YA G L + + D
Sbjct: 81 RERDVMSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 137
Query: 663 AVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
+ L +LHG I+ DL NI L QI D KV+ P +
Sbjct: 138 TAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 723 AGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNE 767
G+ Y+ PE + ++++ G I+ +L+ G GNE
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 61/165 (36%), Gaps = 7/165 (4%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSA-YLFYEYAPKGTLFDVLHGCLENALDWASRYSI 662
+E +V+ +L + L + D Y YA G L + + D
Sbjct: 63 RERDVMSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 119
Query: 663 AVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
+ L +LHG I+ DL NI L QI D KV+ P +
Sbjct: 120 TAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 176
Query: 723 AGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNE 767
G+ Y+ PE + ++++ G I+ +L+ G GNE
Sbjct: 177 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 221
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 61/165 (36%), Gaps = 7/165 (4%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSA-YLFYEYAPKGTLFDVLHGCLENALDWASRYSI 662
+E +V+ +L + L + D Y YA G L + + D
Sbjct: 84 RERDVMSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 140
Query: 663 AVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
+ L +LHG I+ DL NI L QI D KV+ P +
Sbjct: 141 TAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 197
Query: 723 AGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNE 767
G+ Y+ PE + ++++ G I+ +L+ G GNE
Sbjct: 198 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 242
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 61/165 (36%), Gaps = 7/165 (4%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSA-YLFYEYAPKGTLFDVLHGCLENALDWASRYSI 662
+E +V+ +L + L + D Y YA G L + + D
Sbjct: 78 RERDVMSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 134
Query: 663 AVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
+ L +LHG I+ DL NI L QI D KV+ P +
Sbjct: 135 TAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 191
Query: 723 AGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNE 767
G+ Y+ PE + ++++ G I+ +L+ G GNE
Sbjct: 192 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 236
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 61/165 (36%), Gaps = 7/165 (4%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSA-YLFYEYAPKGTLFDVLHGCLENALDWASRYSI 662
+E +V+ +L + L + D Y YA G L + + D
Sbjct: 81 RERDVMSRLDHP-FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 137
Query: 663 AVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
+ L +LHG I+ DL NI L QI D KV+ P +
Sbjct: 138 TAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 723 AGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNE 767
G+ Y+ PE + ++++ G I+ +L+ G GNE
Sbjct: 195 VGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 79/181 (43%), Gaps = 33/181 (18%)
Query: 598 SHHKFDKELEVLGKLSNS-NVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHG--CLENAL 654
H F ELEVL KL + N++ L YL EYAP G L D L LE
Sbjct: 58 DHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDP 117
Query: 655 DWASRYS------------IAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIG 702
+A S A VA+G+ +L + + DL+ RNI +G
Sbjct: 118 AFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNIL--------VG 166
Query: 703 DIELCKVIDPSKSTGSLSTVAGSVGYIPPEYA------YTMRVTMAGNVYSFGVILLELL 756
+ + K+ D S G V ++G +P + Y++ T + +V+S+GV+L E++
Sbjct: 167 ENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNS-DVWSYGVLLWEIV 225
Query: 757 T 757
+
Sbjct: 226 S 226
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 26/255 (10%)
Query: 580 MSYFIKKLNWSDKIFQLGS--HHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYA 637
+ Y++ K + K + GS F +E EV+ KLS+ ++ L L +E+
Sbjct: 45 LGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 104
Query: 638 PKGTLFDVLHGCLENALDWASR-YSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSL 696
G L D L + L A + + V +G+A+L ++ DL+ RN +
Sbjct: 105 EHGCLSDYLR--TQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGEN 159
Query: 697 KEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELL 756
+ ++ D + + + + T S T V + PE R + +V+SFGV++ E+
Sbjct: 160 QVIKVSDFGMTRFVLDDQYTSSTGT-KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 218
Query: 757 T-GKTAVNQGNELAKWVLRNSAQQDKLDHI-LDFNVSRTSLAVRSQMLTVLKVAVACVSV 814
+ GK N + + ++ I F + + LA V ++ C
Sbjct: 219 SEGKIPYE-----------NRSNSEVVEDISTGFRLYKPRLASTH----VYQIMNHCWKE 263
Query: 815 SPEARPKMKSVLRML 829
PE RP +LR L
Sbjct: 264 RPEDRPAFSRLLRQL 278
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 95/252 (37%), Gaps = 49/252 (19%)
Query: 602 FDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENA-------- 653
F +E E+L L + +++ + D + +EY G L L +A
Sbjct: 62 FHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNP 121
Query: 654 ---LDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVI 710
L + IA +A G+ +L S + DL+TRN +G+ L K+
Sbjct: 122 PTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCL--------VGENLLVKIG 170
Query: 711 DPSKSTGSLSTVAGSVG--------YIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTA 761
D S ST VG ++PPE + T +V+S GV+L E+ T GK
Sbjct: 171 DFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
Query: 762 VNQ--GNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEAR 819
Q NE+ + + + Q R+ V ++ + C P R
Sbjct: 231 WYQLSNNEVIECITQGRVLQRP----------------RTCPQEVYELMLGCWQREPHMR 274
Query: 820 PKMKSVLRMLLN 831
+K + +L N
Sbjct: 275 KNIKGIHTLLQN 286
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 76/179 (42%), Gaps = 23/179 (12%)
Query: 2 QSCGGIDGLKLLNFSKNELVSLPT-FNGFAGLEVLDFSSNNLNGNINLQFDELVXXXXXX 60
QS G LK L+ S N ++++ + F G LE LDF +NL Q E
Sbjct: 367 QSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLK-----QMSEFSVFLSLR 421
Query: 61 XXXXXXXGFLPINLGKTK-----------ALEELVLSGNAFHGE-IPKGIADYRNLTLID 108
+L I+ T+ +LE L ++GN+F +P + RNLT +D
Sbjct: 422 NLI-----YLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLD 476
Query: 109 LSANNLSGSVPDRIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQNKFSGSVP 167
LS L P LS L+VL +++N L +T+L + + N + S P
Sbjct: 477 LSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 76/173 (43%), Gaps = 20/173 (11%)
Query: 171 TRFLRNLDLSYNKLLGVIPI--DLLSHPNLQTIDLSVNMLEGSLPQNMSPNLVRLRLGTN 228
T L+ LDLS+N GVI + + L L+ +D + L + MS V L L N
Sbjct: 372 TTSLKYLDLSFN---GVITMSSNFLGLEQLEHLDFQHSNL-----KQMSEFSVFLSL-RN 422
Query: 229 LLIGEIP--------SATFTSLEKLTYLELDNNSFT-GMIPQQLGSCRSLTLLNLAQNEL 279
L+ +I + F L L L++ NSF +P R+LT L+L+Q +L
Sbjct: 423 LIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQL 482
Query: 280 NGSLPIQLGSLGILQVMNLQLNKLSGEIPSQFSQLKLLSTMNISWNSLSGSIP 332
P SL LQV+N+ N+L F +L L + + N S P
Sbjct: 483 EQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 14/146 (9%)
Query: 166 VPGGITRFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLS---VNMLEGSLPQNMSPNLVR 222
+P + +NLDLS+N L + S P LQ +DLS + +E Q++S +L
Sbjct: 22 IPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLS-HLST 80
Query: 223 LRLGTN----LLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNE 278
L L N L +G + +SL+KL +E + S +G ++L LN+A N
Sbjct: 81 LILTGNPIQSLALGAF--SGLSSLQKLVAVETNLASLENF---PIGHLKTLKELNVAHNL 135
Query: 279 LNG-SLPIQLGSLGILQVMNLQLNKL 303
+ LP +L L+ ++L NK+
Sbjct: 136 IQSFKLPEYFSNLTNLEHLDLSSNKI 161
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 7/159 (4%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY 660
K E+ + L N +V+ + D Y+ E + +L + LH + + +RY
Sbjct: 88 KMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARY 146
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
+ + QG+ +LH +N ++ DL N+FL + +IGD L I+
Sbjct: 147 FMRQTI-QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK-- 200
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGK 759
T+ G+ YI PE + +++S G IL LL GK
Sbjct: 201 TLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 12/154 (7%)
Query: 612 LSNSNVMTPLAY--------VLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
L+ +NVM L + V+ + Y+ E+ KG+L D L + +
Sbjct: 58 LAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFS 117
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+A+G+AF+ + DL NI + + +I D L +VI+ ++ T
Sbjct: 118 AQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR-EGAK 173
Query: 724 GSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + PE T+ +V+SFG++L+E++T
Sbjct: 174 FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 207
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 73/176 (41%), Gaps = 17/176 (9%)
Query: 596 LGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENAL- 654
L + F +E E+L L + +++ D + +EY G L L +A+
Sbjct: 58 LAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMI 117
Query: 655 --DWASRYS-----------IAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQI 701
D R + IA +A G+ +L S + DL+TRN + + +I
Sbjct: 118 LVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKI 174
Query: 702 GDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
GD + + + + + ++PPE + T +V+SFGVIL E+ T
Sbjct: 175 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 56/253 (22%), Positives = 102/253 (40%), Gaps = 22/253 (8%)
Query: 580 MSYFIKKLNWSDKIFQLG--SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYA 637
+ Y++ K + K + G S F +E EV+ KLS+ ++ L L +E+
Sbjct: 25 LGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 84
Query: 638 PKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLK 697
G L D L + + + V +G+A+L ++ DL+ RN + +
Sbjct: 85 EHGCLSDYLR-TQRGLFAAETLLGMCLDVCEGMAYLE---EASVIHRDLAARNCLVGENQ 140
Query: 698 EPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
++ D + + + + T S T V + PE R + +V+SFGV++ E+ +
Sbjct: 141 VIKVSDFGMTRFVLDDQYTSSTGT-KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
Query: 758 GKTAVNQGNELAKWVLRNSAQQDKLDHI-LDFNVSRTSLAVRSQMLTVLKVAVACVSVSP 816
K N + + ++ I F + + LA V ++ C P
Sbjct: 200 E----------GKIPYENRSNSEVVEDISTGFRLYKPRLASTH----VYQIMNHCWKERP 245
Query: 817 EARPKMKSVLRML 829
E RP +LR L
Sbjct: 246 EDRPAFSRLLRQL 258
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 19/169 (11%)
Query: 609 LGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLH---GCL--ENALDWASRYSIA 663
+G L +++++ L S S L +Y P G+L D + G L + L+W
Sbjct: 69 IGSLDHAHIVRLLGLCPGS-SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWG------ 121
Query: 664 VGVAQGLAFL--HGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLST 721
V +A+G+ +L HG +L+ RN+ LKS + Q+ D + ++ P S
Sbjct: 122 VQIAKGMYYLEEHGMVHR-----NLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSE 176
Query: 722 VAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAK 770
+ ++ E + + T +V+S+GV + EL+T G LA+
Sbjct: 177 AKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE 225
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 19/169 (11%)
Query: 609 LGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLH---GCL--ENALDWASRYSIA 663
+G L +++++ L S S L +Y P G+L D + G L + L+W
Sbjct: 87 IGSLDHAHIVRLLGLCPGS-SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWG------ 139
Query: 664 VGVAQGLAFL--HGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLST 721
V +A+G+ +L HG +L+ RN+ LKS + Q+ D + ++ P S
Sbjct: 140 VQIAKGMYYLEEHGMVHR-----NLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSE 194
Query: 722 VAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAK 770
+ ++ E + + T +V+S+GV + EL+T G LA+
Sbjct: 195 AKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE 243
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 78/182 (42%), Gaps = 15/182 (8%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVL--HGCLENALD 655
S K +E+ ++ L++ N++ + + YL EYA G +FD L HG ++ +
Sbjct: 54 SLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEK-E 112
Query: 656 WASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715
S++ V Q + H I+ DL N+ L + +I D +
Sbjct: 113 ARSKFRQIVSAVQ---YCH---QKRIVHRDLKAENLLLDADMNIKIADFGFS---NEFTV 163
Query: 716 TGSLSTVAGSVGYIPPEYAYTMRVTMAG-NVYSFGVILLELLTGKTAVNQGN--ELAKWV 772
G L T GS Y PE + +V+S GVIL L++G + N EL + V
Sbjct: 164 GGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 223
Query: 773 LR 774
LR
Sbjct: 224 LR 225
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 68/166 (40%), Gaps = 19/166 (11%)
Query: 606 LEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHG--------CL------E 651
++++GK + N++ L Y+ EYA KG L + L C E
Sbjct: 72 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPE 129
Query: 652 NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711
L S A VA+G+ +L S + DL+ RN+ + +I D L + I
Sbjct: 130 EQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 186
Query: 712 PSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ V ++ PE + T +V+SFGV+L E+ T
Sbjct: 187 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 6/162 (3%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
KE+ + L++ NV+ + + YLF EY G LFD + + A R+
Sbjct: 53 KEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+ G+ +LHG I D+ N+ L +I D L V + L+ +
Sbjct: 113 --LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 724 GSVGYIPPEYAYTMRVTMAG-NVYSFGVILLELLTGKTAVNQ 764
G++ Y+ PE +V+S G++L +L G+ +Q
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 79/181 (43%), Gaps = 33/181 (18%)
Query: 598 SHHKFDKELEVLGKLSNS-NVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHG--CLENAL 654
H F ELEVL KL + N++ L YL EYAP G L D L LE
Sbjct: 65 DHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDP 124
Query: 655 DWASRYS------------IAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIG 702
+A S A VA+G+ +L + + +L+ RNI +G
Sbjct: 125 AFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRNLAARNIL--------VG 173
Query: 703 DIELCKVIDPSKSTGSLSTVAGSVGYIPPEYA------YTMRVTMAGNVYSFGVILLELL 756
+ + K+ D S G V ++G +P + Y++ T + +V+S+GV+L E++
Sbjct: 174 ENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNS-DVWSYGVLLWEIV 232
Query: 757 T 757
+
Sbjct: 233 S 233
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 12/154 (7%)
Query: 612 LSNSNVMTPLAY--------VLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
L+ +NVM L + V+ + Y+ E+ KG+L D L + +
Sbjct: 231 LAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFS 290
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+A+G+AF+ + DL NI + + +I D L +VI+ ++ T
Sbjct: 291 AQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR-EGAK 346
Query: 724 GSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + PE T+ +V+SFG++L+E++T
Sbjct: 347 FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 380
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 6/162 (3%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
KE+ + L++ NV+ + + YLF EY G LFD + + A R+
Sbjct: 53 KEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+ G+ +LHG I D+ N+ L +I D L V + L+ +
Sbjct: 113 --LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX 167
Query: 724 GSVGYIPPEYAYTMRVTMAG-NVYSFGVILLELLTGKTAVNQ 764
G++ Y+ PE +V+S G++L +L G+ +Q
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 19/166 (11%)
Query: 606 LEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA-------- 657
++++GK + N++ L Y+ EYA KG L + L L+++
Sbjct: 87 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPE 144
Query: 658 ------SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711
S A VA+G+ +L S + DL+ RN+ + +I D L + I
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 201
Query: 712 PSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ V ++ PE + T +V+SFGV+L E+ T
Sbjct: 202 HIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 76/162 (46%), Gaps = 20/162 (12%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
+E+E+L KL + N+M + S S Y+ E G LFD + + A+R I
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR--II 127
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG-----S 718
V G+ ++H + I+ DL NI L+S KE DI K+ID ST
Sbjct: 128 KQVFSGITYMH---KHNIVHRDLKPENILLES-KEKDC-DI---KIIDFGLSTCFQQNTK 179
Query: 719 LSTVAGSVGYIPPEYAYTMRVTM--AGNVYSFGVILLELLTG 758
+ G+ YI PE +R T +V+S GVIL LL+G
Sbjct: 180 MKDRIGTAYYIAPE---VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 68/166 (40%), Gaps = 19/166 (11%)
Query: 606 LEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHG--------CL------E 651
++++GK + N++ L Y+ EYA KG L + L C E
Sbjct: 87 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPE 144
Query: 652 NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711
L S A VA+G+ +L S + DL+ RN+ + +I D L + I
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 201
Query: 712 PSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ V ++ PE + T +V+SFGV+L E+ T
Sbjct: 202 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 92/227 (40%), Gaps = 30/227 (13%)
Query: 605 ELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAV 664
E+E L L + ++ + ++ ++ EY P G LFD + ++ L +
Sbjct: 58 EIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIIS--QDRLSEEETRVVFR 115
Query: 665 GVAQGLAFLH--GFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
+ +A++H G+ DL N+ + ++ D LC +K L T
Sbjct: 116 QIVSAVAYVHSQGYAHR-----DLKPENLLFDEYHKLKLIDFGLCAKPKGNKDY-HLQTC 169
Query: 723 AGSVGYIPPEYAY-TMRVTMAGNVYSFGVILLELLTGKTAVNQGNELA--KWVLRNSAQQ 779
GS+ Y PE + +V+S G++L L+ G + N +A K ++R
Sbjct: 170 CGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDV 229
Query: 780 DKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVL 826
K +S +S+ + QML V P+ R MK++L
Sbjct: 230 PKW-------LSPSSILLLQQML----------QVDPKKRISMKNLL 259
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 46.2 bits (108), Expect = 8e-05, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 12/154 (7%)
Query: 612 LSNSNVMTPLAY--------VLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
L+ +N+M L + V+ + Y+ EY G+L D L L +A
Sbjct: 56 LAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 115
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+A+G+AF+ + DL NI + +I D L ++I+ ++ T
Sbjct: 116 AQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR-EGAK 171
Query: 724 GSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + PE T+ +V+SFG++L E++T
Sbjct: 172 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 46.2 bits (108), Expect = 8e-05, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 12/154 (7%)
Query: 612 LSNSNVMTPLAY--------VLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
L+ +N+M L + V+ + Y+ EY G+L D L L +A
Sbjct: 57 LAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 116
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+A+G+AF+ + DL NI + +I D L ++I+ ++ T
Sbjct: 117 AQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR-EGAK 172
Query: 724 GSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + PE T+ +V+SFG++L E++T
Sbjct: 173 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 206
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 46.2 bits (108), Expect = 8e-05, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 12/154 (7%)
Query: 612 LSNSNVMTPLAY--------VLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
L+ +N+M L + V+ + Y+ EY G+L D L L +A
Sbjct: 58 LAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 117
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+A+G+AF+ + DL NI + +I D L ++I+ ++ T
Sbjct: 118 AQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR-EGAK 173
Query: 724 GSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + PE T+ +V+SFG++L E++T
Sbjct: 174 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 207
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 46.2 bits (108), Expect = 8e-05, Method: Composition-based stats.
Identities = 56/253 (22%), Positives = 102/253 (40%), Gaps = 22/253 (8%)
Query: 580 MSYFIKKLNWSDKIFQLG--SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYA 637
+ Y++ K + K + G S F +E EV+ KLS+ ++ L L +E+
Sbjct: 23 LGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 82
Query: 638 PKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLK 697
G L D L + + + V +G+A+L ++ DL+ RN + +
Sbjct: 83 EHGCLSDYLR-TQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQ 138
Query: 698 EPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
++ D + + + + T S T V + PE R + +V+SFGV++ E+ +
Sbjct: 139 VIKVSDFGMTRFVLDDQYTSSTGT-KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 197
Query: 758 GKTAVNQGNELAKWVLRNSAQQDKLDHI-LDFNVSRTSLAVRSQMLTVLKVAVACVSVSP 816
K N + + ++ I F + + LA V ++ C P
Sbjct: 198 E----------GKIPYENRSNSEVVEDISTGFRLYKPRLASTH----VYQIMNHCWKERP 243
Query: 817 EARPKMKSVLRML 829
E RP +LR L
Sbjct: 244 EDRPAFSRLLRQL 256
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 46.2 bits (108), Expect = 8e-05, Method: Composition-based stats.
Identities = 56/253 (22%), Positives = 102/253 (40%), Gaps = 22/253 (8%)
Query: 580 MSYFIKKLNWSDKIFQLG--SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYA 637
+ Y++ K + K + G S F +E EV+ KLS+ ++ L L +E+
Sbjct: 25 LGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 84
Query: 638 PKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLK 697
G L D L + + + V +G+A+L ++ DL+ RN + +
Sbjct: 85 EHGCLSDYLR-TQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQ 140
Query: 698 EPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
++ D + + + + T S T V + PE R + +V+SFGV++ E+ +
Sbjct: 141 VIKVSDFGMTRFVLDDQYTSSTGT-KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
Query: 758 GKTAVNQGNELAKWVLRNSAQQDKLDHI-LDFNVSRTSLAVRSQMLTVLKVAVACVSVSP 816
K N + + ++ I F + + LA V ++ C P
Sbjct: 200 E----------GKIPYENRSNSEVVEDISTGFRLYKPRLASTH----VYQIMNHCWKERP 245
Query: 817 EARPKMKSVLRML 829
E RP +LR L
Sbjct: 246 EDRPAFSRLLRQL 258
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 6/162 (3%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
KE+ + L++ NV+ + + YLF EY G LFD + + A R+
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+ G+ +LHG I D+ N+ L +I D L V + L+ +
Sbjct: 113 --LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 724 GSVGYIPPEYAYTMRVTMAG-NVYSFGVILLELLTGKTAVNQ 764
G++ Y+ PE +V+S G++L +L G+ +Q
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 7/159 (4%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY 660
K E+ + L N +V+ + D Y+ E + +L + LH + + +RY
Sbjct: 72 KMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARY 130
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
+ + QG+ +LH +N ++ DL N+FL + +IGD L I+
Sbjct: 131 FMRQTI-QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK-- 184
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGK 759
+ G+ YI PE + +++S G IL LL GK
Sbjct: 185 DLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 223
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 6/162 (3%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
KE+ + L++ NV+ + + YLF EY G LFD + + A R+
Sbjct: 54 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 113
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+ G+ +LHG I D+ N+ L +I D L V + L+ +
Sbjct: 114 --LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 724 GSVGYIPPEYAYTMRVTMAG-NVYSFGVILLELLTGKTAVNQ 764
G++ Y+ PE +V+S G++L +L G+ +Q
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 19/166 (11%)
Query: 606 LEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASR------ 659
++++GK + N++ L Y+ EYA KG L + L L+++
Sbjct: 128 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 185
Query: 660 --------YSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711
S A VA+G+ +L S + DL+ RN+ + +I D L + I
Sbjct: 186 EQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 242
Query: 712 PSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ V ++ PE + T +V+SFGV+L E+ T
Sbjct: 243 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 56/253 (22%), Positives = 102/253 (40%), Gaps = 22/253 (8%)
Query: 580 MSYFIKKLNWSDKIFQLG--SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYA 637
+ Y++ K + K + G S F +E EV+ KLS+ ++ L L +E+
Sbjct: 28 LGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87
Query: 638 PKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLK 697
G L D L + + + V +G+A+L ++ DL+ RN + +
Sbjct: 88 EHGCLSDYLR-TQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQ 143
Query: 698 EPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
++ D + + + + T S T V + PE R + +V+SFGV++ E+ +
Sbjct: 144 VIKVSDFGMTRFVLDDQYTSSTGT-KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 202
Query: 758 GKTAVNQGNELAKWVLRNSAQQDKLDHI-LDFNVSRTSLAVRSQMLTVLKVAVACVSVSP 816
K N + + ++ I F + + LA V ++ C P
Sbjct: 203 E----------GKIPYENRSNSEVVEDISTGFRLYKPRLASTH----VYQIMNHCWRERP 248
Query: 817 EARPKMKSVLRML 829
E RP +LR L
Sbjct: 249 EDRPAFSRLLRQL 261
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 6/162 (3%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
KE+ + L++ NV+ + + YLF EY G LFD + + A R+
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+ G+ +LHG I D+ N+ L +I D L V + L+ +
Sbjct: 113 --LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 724 GSVGYIPPEYAYTMRVTMAG-NVYSFGVILLELLTGKTAVNQ 764
G++ Y+ PE +V+S G++L +L G+ +Q
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 19/166 (11%)
Query: 606 LEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASR------ 659
++++GK + N++ L Y+ EYA KG L + L L+++
Sbjct: 79 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 136
Query: 660 --------YSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711
S A VA+G+ +L S + DL+ RN+ + +I D L + I
Sbjct: 137 EQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 193
Query: 712 PSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ V ++ PE + T +V+SFGV+L E+ T
Sbjct: 194 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 19/166 (11%)
Query: 606 LEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASR------ 659
++++GK + N++ L Y+ EYA KG L + L L+++
Sbjct: 76 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 133
Query: 660 --------YSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711
S A VA+G+ +L S + DL+ RN+ + +I D L + I
Sbjct: 134 EQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 190
Query: 712 PSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ V ++ PE + T +V+SFGV+L E+ T
Sbjct: 191 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 6/162 (3%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
KE+ + L++ NV+ + + YLF EY G LFD + + A R+
Sbjct: 52 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 111
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+ G+ +LHG I D+ N+ L +I D L V + L+ +
Sbjct: 112 --LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 166
Query: 724 GSVGYIPPEYAYTMRVTMAG-NVYSFGVILLELLTGKTAVNQ 764
G++ Y+ PE +V+S G++L +L G+ +Q
Sbjct: 167 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 208
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 69/166 (41%), Gaps = 13/166 (7%)
Query: 597 GSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFD-VLHGCLENALD 655
G + E+ VL K+ + N++ + YL + G LFD ++ D
Sbjct: 58 GKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERD 117
Query: 656 WASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQ---IGDIELCKVIDP 712
ASR + V + +LH I+ DL N+ SL E I D L K+ DP
Sbjct: 118 -ASR--LIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP 171
Query: 713 SKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 758
LST G+ GY+ PE + A + +S GVI LL G
Sbjct: 172 G---SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 19/166 (11%)
Query: 606 LEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASR------ 659
++++GK + N++ L Y+ EYA KG L + L L+++
Sbjct: 87 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 144
Query: 660 --------YSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711
S A VA+G+ +L S + DL+ RN+ + +I D L + I
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 201
Query: 712 PSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ V ++ PE + T +V+SFGV+L E+ T
Sbjct: 202 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 6/162 (3%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
KE+ + L++ NV+ + + YLF EY G LFD + + A R+
Sbjct: 54 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 113
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+ G+ +LHG I D+ N+ L +I D L V + L+ +
Sbjct: 114 --LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 724 GSVGYIPPEYAYTMRVTMAG-NVYSFGVILLELLTGKTAVNQ 764
G++ Y+ PE +V+S G++L +L G+ +Q
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 6/162 (3%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
KE+ + L++ NV+ + + YLF EY G LFD + + A R+
Sbjct: 54 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 113
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+ G+ +LHG I D+ N+ L +I D L V + L+ +
Sbjct: 114 --LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 724 GSVGYIPPEYAYTMRVTMAG-NVYSFGVILLELLTGKTAVNQ 764
G++ Y+ PE +V+S G++L +L G+ +Q
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 6/162 (3%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
KE+ + L++ NV+ + + YLF EY G LFD + + A R+
Sbjct: 54 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 113
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+ G+ +LHG I D+ N+ L +I D L V + L+ +
Sbjct: 114 --LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 724 GSVGYIPPEYAYTMRVTMAG-NVYSFGVILLELLTGKTAVNQ 764
G++ Y+ PE +V+S G++L +L G+ +Q
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 6/162 (3%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
KE+ + L++ NV+ + + YLF EY G LFD + + A R+
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+ G+ +LHG I D+ N+ L +I D L V + L+ +
Sbjct: 113 --LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 724 GSVGYIPPEYAYTMRVTMAG-NVYSFGVILLELLTGKTAVNQ 764
G++ Y+ PE +V+S G++L +L G+ +Q
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 71/167 (42%), Gaps = 15/167 (8%)
Query: 597 GSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFD-VLHGCLENALD 655
G + E+ VL K+ + N++ + YL + G LFD ++ D
Sbjct: 58 GKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERD 117
Query: 656 WASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQ---IGDIELCKVIDP 712
ASR + V + +LH I+ DL N+ SL E I D L K+ DP
Sbjct: 118 -ASR--LIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP 171
Query: 713 SKSTGS-LSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 758
GS LST G+ GY+ PE + A + +S GVI LL G
Sbjct: 172 ----GSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 12/154 (7%)
Query: 612 LSNSNVMTPLAY--------VLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
L+ +N+M L + V+ + Y+ EY G+L D L L +A
Sbjct: 62 LAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 121
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+A+G+AF+ + DL NI + +I D L ++I+ ++ T
Sbjct: 122 AQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR-EGAK 177
Query: 724 GSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + PE T+ +V+SFG++L E++T
Sbjct: 178 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 12/154 (7%)
Query: 612 LSNSNVMTPLAY--------VLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
L+ +N+M L + V+ + Y+ EY G+L D L L +A
Sbjct: 56 LAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 115
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+A+G+AF+ + DL NI + +I D L ++I+ ++ T
Sbjct: 116 AQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR-EGAK 171
Query: 724 GSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + PE T+ +V+SFG++L E++T
Sbjct: 172 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 12/154 (7%)
Query: 612 LSNSNVMTPLAY--------VLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
L+ +N+M L + V+ + Y+ EY G+L D L L +A
Sbjct: 51 LAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 110
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+A+G+AF+ + DL NI + +I D L ++I+ ++ T
Sbjct: 111 AQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR-EGAK 166
Query: 724 GSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + PE T+ +V+SFG++L E++T
Sbjct: 167 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 200
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 12/154 (7%)
Query: 612 LSNSNVMTPLAY--------VLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
L+ +N+M L + V+ + Y+ EY G+L D L L +A
Sbjct: 61 LAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 120
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+A+G+AF+ + DL NI + +I D L ++I+ ++ T
Sbjct: 121 AQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR-EGAK 176
Query: 724 GSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + PE T+ +V+SFG++L E++T
Sbjct: 177 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 210
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 78/171 (45%), Gaps = 20/171 (11%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
+E+E+L KL + N+M + S S Y+ E G LFD + + A+R I
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR--II 127
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG-----S 718
V G+ ++H + I+ DL NI L+S KE DI K+ID ST
Sbjct: 128 KQVFSGITYMH---KHNIVHRDLKPENILLES-KEKDC-DI---KIIDFGLSTCFQQNTK 179
Query: 719 LSTVAGSVGYIPPEYAYTMRVTM--AGNVYSFGVILLELLTGKTAVNQGNE 767
+ G+ YI PE +R T +V+S GVIL LL+G NE
Sbjct: 180 MKDRIGTAYYIAPE---VLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNE 227
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 19/166 (11%)
Query: 606 LEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASR------ 659
++++GK + N++ L Y+ EYA KG L + L L+++
Sbjct: 80 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 137
Query: 660 --------YSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711
S A VA+G+ +L S + DL+ RN+ + +I D L + I
Sbjct: 138 EQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 194
Query: 712 PSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ V ++ PE + T +V+SFGV+L E+ T
Sbjct: 195 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 6/162 (3%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
KE+ + L++ NV+ + + YLF EY G LFD + + A R+
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+ G+ +LHG I D+ N+ L +I D L V + L+ +
Sbjct: 113 --LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX 167
Query: 724 GSVGYIPPEYAYTMRVTMAG-NVYSFGVILLELLTGKTAVNQ 764
G++ Y+ PE +V+S G++L +L G+ +Q
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 7/159 (4%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY 660
K E+ + L N +V+ + D Y+ E + +L + LH + + +RY
Sbjct: 88 KMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARY 146
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
+ + QG+ +LH +N ++ DL N+FL + +IGD L I+
Sbjct: 147 FMRQTI-QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK-- 200
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGK 759
+ G+ YI PE + +++S G IL LL GK
Sbjct: 201 XLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 78/171 (45%), Gaps = 20/171 (11%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
+E+E+L KL + N+M + S S Y+ E G LFD + + A+R I
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR--II 127
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG-----S 718
V G+ ++H + I+ DL NI L+S KE DI K+ID ST
Sbjct: 128 KQVFSGITYMH---KHNIVHRDLKPENILLES-KEKDC-DI---KIIDFGLSTCFQQNTK 179
Query: 719 LSTVAGSVGYIPPEYAYTMRVTM--AGNVYSFGVILLELLTGKTAVNQGNE 767
+ G+ YI PE +R T +V+S GVIL LL+G NE
Sbjct: 180 MKDRIGTAYYIAPE---VLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNE 227
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 71/167 (42%), Gaps = 15/167 (8%)
Query: 597 GSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFD-VLHGCLENALD 655
G + E+ VL K+ + N++ + YL + G LFD ++ D
Sbjct: 58 GKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERD 117
Query: 656 WASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQ---IGDIELCKVIDP 712
ASR + V + +LH I+ DL N+ SL E I D L K+ DP
Sbjct: 118 -ASR--LIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP 171
Query: 713 SKSTGS-LSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 758
GS LST G+ GY+ PE + A + +S GVI LL G
Sbjct: 172 ----GSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 7/159 (4%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY 660
K E+ + L N +V+ + D Y+ E + +L + LH + + +RY
Sbjct: 88 KMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARY 146
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
+ + QG+ +LH +N ++ DL N+FL + +IGD L I+
Sbjct: 147 FMRQTI-QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK-- 200
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGK 759
+ G+ YI PE + +++S G IL LL GK
Sbjct: 201 DLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 19/166 (11%)
Query: 606 LEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASR------ 659
++++GK + N++ L Y+ EYA KG L + L L+++
Sbjct: 87 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPE 144
Query: 660 --------YSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711
S A VA+G+ +L S + DL+ RN+ + +I D L + I
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 201
Query: 712 PSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ V ++ PE + T +V+SFGV+L E+ T
Sbjct: 202 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 75 GKTKALEELVLSGNAFHGEIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLILS 134
G + + EL L GN F +PK +++Y++LTLIDLS N +S +++L LILS
Sbjct: 28 GIPRDVTELYLDGNQF-TLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILS 86
Query: 135 ANNLDGRLPTSLASITTLSRFAANQNKFSGSVPGG 169
N L P + + +L + + N S VP G
Sbjct: 87 YNRLRCIPPRTFDGLKSLRLLSLHGNDIS-VVPEG 120
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 8/123 (6%)
Query: 141 RLPTSLASITTLSRFAANQNKFSGSVPGGITRFLRNLDLSYNKLLGVIPIDLLSHPNLQT 200
R PT + T+ R + NK +P GI R + L L N+ ++P +L ++ +L
Sbjct: 3 RCPTECTCLDTVVRCS---NKGLKVLPKGIPRDVTELYLDGNQF-TLVPKELSNYKHLTL 58
Query: 201 IDLSVNMLEGSLPQNMS--PNLVRLRLGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGM 258
IDLS N + Q+ S L+ L L N L IP TF L+ L L L N + +
Sbjct: 59 IDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRC-IPPRTFDGLKSLRLLSLHGNDIS-V 116
Query: 259 IPQ 261
+P+
Sbjct: 117 VPE 119
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 245 LTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNGSLPIQLGSLGILQVMNLQLNKLS 304
+T L LD N FT ++P++L + + LTL++L+ N ++ ++ L + L N+L
Sbjct: 33 VTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR 91
Query: 305 GEIPSQFSQLKLLSTMNISWNSLS 328
P F LK L +++ N +S
Sbjct: 92 CIPPRTFDGLKSLRLLSLHGNDIS 115
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 6/162 (3%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
KE+ + L++ NV+ + + YLF EY G LFD + + A R+
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+ G+ +LHG I D+ N+ L +I D L V + L+ +
Sbjct: 113 --LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX 167
Query: 724 GSVGYIPPEYAYTMRVTMAG-NVYSFGVILLELLTGKTAVNQ 764
G++ Y+ PE +V+S G++L +L G+ +Q
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 69/166 (41%), Gaps = 13/166 (7%)
Query: 597 GSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFD-VLHGCLENALD 655
G + E+ VL K+ + N++ + YL + G LFD ++ D
Sbjct: 58 GKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERD 117
Query: 656 WASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQ---IGDIELCKVIDP 712
ASR + V + +LH I+ DL N+ SL E I D L K+ DP
Sbjct: 118 -ASR--LIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP 171
Query: 713 SKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 758
LST G+ GY+ PE + A + +S GVI LL G
Sbjct: 172 G---SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 7/159 (4%)
Query: 602 FDKELEVLGKLSNSNVMT--PLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASR 659
F +E+++L L + ++ ++Y S L EY P G L D L LD +
Sbjct: 58 FQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR-HRARLDASRL 116
Query: 660 YSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSL 719
+ + +G+ +L S + DL+ RNI ++S +I D L K++ K +
Sbjct: 117 LLYSSQICKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVV 173
Query: 720 STVAGS-VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
S + + PE + +V+SFGV+L EL T
Sbjct: 174 REPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 94/217 (43%), Gaps = 46/217 (21%)
Query: 101 YRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQN 160
+ NLT++DLS NNL+ D L +LE L NN+ Q+
Sbjct: 252 WTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNI--------------------QH 291
Query: 161 KFSGSVPGGITRFLRNLDLSYNK----LLGVIPIDLLSHPNLQTIDLSVNMLEGSLP--- 213
FS S+ G NL S+ K L + ID S L+ ++ +NM + +P
Sbjct: 292 LFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLE-HLNMEDNDIPGIK 350
Query: 214 QNMSPNLVRLRLGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLN 273
NM L+ L+ + S +FTSL LT N +F + + L +LN
Sbjct: 351 SNMFTGLINLKYLS-------LSNSFTSLRTLT-----NETFVSL------AHSPLHILN 392
Query: 274 LAQNELNGSLPIQLGSLGILQVMNLQLNKLSGEIPSQ 310
L +N+++ LG L+V++L LN++ E+ Q
Sbjct: 393 LTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQ 429
Score = 36.2 bits (82), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
Query: 212 LPQNMSPNLVRLRLGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTL 271
+P ++ N+ L L N L +P+A FT +LT L++ N+ + + P+ L +
Sbjct: 24 VPDDLPTNITVLNLTHNQL-RRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKV 82
Query: 272 LNLAQNELNGSLPIQLGSLGILQVMNLQLNKLSGEIPSQFSQLKLLSTMNISWNSLSGS 330
LNL NEL+ L ++L N + + F + K L T+++S N LS +
Sbjct: 83 LNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSST 141
Score = 32.7 bits (73), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 120/298 (40%), Gaps = 60/298 (20%)
Query: 10 LKLLNFSKNELVSLPT--FNGFAGLEVLDFSSNNLNGNINLQ--------FDELVXXXXX 59
L +LN +KN++ + + F+ LEVLD N + + Q F+ +
Sbjct: 388 LHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKY 447
Query: 60 XXXXXXXXGFLPINLGKTKALEELVLSGNAFHG--EIPKGIADYRNLTLIDLSANNLSGS 117
+P +L+ L+L A P RNLT++DLS NN++
Sbjct: 448 LQLTRNSFALVP-------SLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANI 500
Query: 118 VPDRIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQNKFSGSVPGGITRFLRNL 177
D + L KLE+L L NN L+R + N PGG FL+
Sbjct: 501 NDDMLEGLEKLEILDLQHNN--------------LARLWKHAN------PGGPIYFLKG- 539
Query: 178 DLSYNKLLGV-------IPIDLLSHP-NLQTIDLSVNMLEGSLPQNMSPNLVRLR---LG 226
LS+ +L + IP+++ L+ IDL +N L +LP ++ N V L+ L
Sbjct: 540 -LSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNL-NTLPASVFNNQVSLKSLNLQ 597
Query: 227 TNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNGSLP 284
NL+ + LT L++ N F +C S+ NE + ++P
Sbjct: 598 KNLITSVEKKVFGPAFRNLTELDMRFNPFD-------CTCESIAWFVNWINETHTNIP 648
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 94/217 (43%), Gaps = 46/217 (21%)
Query: 101 YRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQN 160
+ NLT++DLS NNL+ D L +LE L NN+ Q+
Sbjct: 247 WTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNI--------------------QH 286
Query: 161 KFSGSVPGGITRFLRNLDLSYNK----LLGVIPIDLLSHPNLQTIDLSVNMLEGSLP--- 213
FS S+ G NL S+ K L + ID S L+ ++ +NM + +P
Sbjct: 287 LFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLE-HLNMEDNDIPGIK 345
Query: 214 QNMSPNLVRLRLGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLN 273
NM L+ L+ + S +FTSL LT N +F + + L +LN
Sbjct: 346 SNMFTGLINLKYLS-------LSNSFTSLRTLT-----NETFVSL------AHSPLHILN 387
Query: 274 LAQNELNGSLPIQLGSLGILQVMNLQLNKLSGEIPSQ 310
L +N+++ LG L+V++L LN++ E+ Q
Sbjct: 388 LTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQ 424
Score = 36.2 bits (82), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
Query: 212 LPQNMSPNLVRLRLGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTL 271
+P ++ N+ L L N L +P+A FT +LT L++ N+ + + P+ L +
Sbjct: 19 VPDDLPTNITVLNLTHNQL-RRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKV 77
Query: 272 LNLAQNELNGSLPIQLGSLGILQVMNLQLNKLSGEIPSQFSQLKLLSTMNISWNSLSGS 330
LNL NEL+ L ++L N + + F + K L T+++S N LS +
Sbjct: 78 LNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSST 136
Score = 32.7 bits (73), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 120/298 (40%), Gaps = 60/298 (20%)
Query: 10 LKLLNFSKNELVSLPT--FNGFAGLEVLDFSSNNLNGNINLQ--------FDELVXXXXX 59
L +LN +KN++ + + F+ LEVLD N + + Q F+ +
Sbjct: 383 LHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKY 442
Query: 60 XXXXXXXXGFLPINLGKTKALEELVLSGNAFHG--EIPKGIADYRNLTLIDLSANNLSGS 117
+P +L+ L+L A P RNLT++DLS NN++
Sbjct: 443 LQLTRNSFALVP-------SLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANI 495
Query: 118 VPDRIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQNKFSGSVPGGITRFLRNL 177
D + L KLE+L L NN L+R + N PGG FL+
Sbjct: 496 NDDMLEGLEKLEILDLQHNN--------------LARLWKHAN------PGGPIYFLKG- 534
Query: 178 DLSYNKLLGV-------IPIDLLSHP-NLQTIDLSVNMLEGSLPQNMSPNLVRLR---LG 226
LS+ +L + IP+++ L+ IDL +N L +LP ++ N V L+ L
Sbjct: 535 -LSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNL-NTLPASVFNNQVSLKSLNLQ 592
Query: 227 TNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNGSLP 284
NL+ + LT L++ N F +C S+ NE + ++P
Sbjct: 593 KNLITSVEKKVFGPAFRNLTELDMRFNPFD-------CTCESIAWFVNWINETHTNIP 643
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 7/159 (4%)
Query: 602 FDKELEVLGKLSNSNVMT--PLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASR 659
F +E+++L L + ++ ++Y S L EY P G L D L LD +
Sbjct: 59 FQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR-HRARLDASRL 117
Query: 660 YSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSL 719
+ + +G+ +L S + DL+ RNI ++S +I D L K++ K +
Sbjct: 118 LLYSSQICKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVV 174
Query: 720 STVAGS-VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
S + + PE + +V+SFGV+L EL T
Sbjct: 175 REPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 7/159 (4%)
Query: 602 FDKELEVLGKLSNSNVMT--PLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASR 659
F +E+++L L + ++ ++Y S L EY P G L D L LD +
Sbjct: 71 FQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR-HRARLDASRL 129
Query: 660 YSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSL 719
+ + +G+ +L S + DL+ RNI ++S +I D L K++ K +
Sbjct: 130 LLYSSQICKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVV 186
Query: 720 STVAGS-VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
S + + PE + +V+SFGV+L EL T
Sbjct: 187 REPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 94/217 (43%), Gaps = 46/217 (21%)
Query: 101 YRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQN 160
+ NLT++DLS NNL+ D L +LE L NN+ Q+
Sbjct: 257 WTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNI--------------------QH 296
Query: 161 KFSGSVPGGITRFLRNLDLSYNK----LLGVIPIDLLSHPNLQTIDLSVNMLEGSLP--- 213
FS S+ G NL S+ K L + ID S L+ ++ +NM + +P
Sbjct: 297 LFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLE-HLNMEDNDIPGIK 355
Query: 214 QNMSPNLVRLRLGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLN 273
NM L+ L+ + S +FTSL LT N +F + + L +LN
Sbjct: 356 SNMFTGLINLKYLS-------LSNSFTSLRTLT-----NETFVSL------AHSPLHILN 397
Query: 274 LAQNELNGSLPIQLGSLGILQVMNLQLNKLSGEIPSQ 310
L +N+++ LG L+V++L LN++ E+ Q
Sbjct: 398 LTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQ 434
Score = 36.2 bits (82), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
Query: 212 LPQNMSPNLVRLRLGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTL 271
+P ++ N+ L L N L +P+A FT +LT L++ N+ + + P+ L +
Sbjct: 29 VPDDLPTNITVLNLTHNQL-RRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKV 87
Query: 272 LNLAQNELNGSLPIQLGSLGILQVMNLQLNKLSGEIPSQFSQLKLLSTMNISWNSLSGS 330
LNL NEL+ L ++L N + + F + K L T+++S N LS +
Sbjct: 88 LNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSST 146
Score = 32.7 bits (73), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 120/298 (40%), Gaps = 60/298 (20%)
Query: 10 LKLLNFSKNELVSLPT--FNGFAGLEVLDFSSNNLNGNINLQ--------FDELVXXXXX 59
L +LN +KN++ + + F+ LEVLD N + + Q F+ +
Sbjct: 393 LHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKY 452
Query: 60 XXXXXXXXGFLPINLGKTKALEELVLSGNAFHG--EIPKGIADYRNLTLIDLSANNLSGS 117
+P +L+ L+L A P RNLT++DLS NN++
Sbjct: 453 LQLTRNSFALVP-------SLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANI 505
Query: 118 VPDRIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQNKFSGSVPGGITRFLRNL 177
D + L KLE+L L NN L+R + N PGG FL+
Sbjct: 506 NDDMLEGLEKLEILDLQHNN--------------LARLWKHAN------PGGPIYFLKG- 544
Query: 178 DLSYNKLLGV-------IPIDLLSHP-NLQTIDLSVNMLEGSLPQNMSPNLVRLR---LG 226
LS+ +L + IP+++ L+ IDL +N L +LP ++ N V L+ L
Sbjct: 545 -LSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNL-NTLPASVFNNQVSLKSLNLQ 602
Query: 227 TNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNGSLP 284
NL+ + LT L++ N F +C S+ NE + ++P
Sbjct: 603 KNLITSVEKKVFGPAFRNLTELDMRFNPFD-------CTCESIAWFVNWINETHTNIP 653
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 12/154 (7%)
Query: 612 LSNSNVMTPLAY--------VLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
L+ +N+M L + V+ + Y+ EY G+L D L L +A
Sbjct: 65 LAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 124
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+A+G+AF+ + DL NI + +I D L ++I+ ++ T
Sbjct: 125 AQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR-EGAK 180
Query: 724 GSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + PE T+ +V+SFG++L E++T
Sbjct: 181 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 214
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 26/143 (18%)
Query: 637 APKGTLFDVLHGCL-ENALDWASRYS------------IAVGVAQGLAFLHGFTSNPILL 683
+PK L+ + C EN DW +R I + +A+ + FLH S ++
Sbjct: 131 SPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLH---SKGLMH 187
Query: 684 LDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSL-------STVAGSVG---YIPPEY 733
DL NIF ++GD L +D + ++ +T G VG Y+ PE
Sbjct: 188 RDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQ 247
Query: 734 AYTMRVTMAGNVYSFGVILLELL 756
+ + +++S G+IL ELL
Sbjct: 248 IHGNNYSHKVDIFSLGLILFELL 270
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 63/164 (38%), Gaps = 8/164 (4%)
Query: 605 ELEVLGKLSNSNVMTPLAYVLAS-DSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
E +L N +T L + D + E+ G L + H D A A
Sbjct: 73 EKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL--MFHIQKSRRFDEARARFYA 130
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+ L FLH I+ DL N+ L ++ D +CK + + + +T
Sbjct: 131 AEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFC 185
Query: 724 GSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNE 767
G+ YI PE M A + ++ GV+L E+L G NE
Sbjct: 186 GTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE 229
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 12/154 (7%)
Query: 612 LSNSNVMTPLAY--------VLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
L+ +N+M L + V+ + Y+ EY G+L D L L +A
Sbjct: 56 LAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 115
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+A+G+AF+ + DL NI + +I D L ++I+ ++ T
Sbjct: 116 AQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAR-EGAK 171
Query: 724 GSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + PE T+ +V+SFG++L E++T
Sbjct: 172 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 12/154 (7%)
Query: 612 LSNSNVMTPLAY--------VLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
L+ +N+M L + V+ + Y+ EY G+L D L L +A
Sbjct: 64 LAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 123
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+A+G+AF+ + DL NI + +I D L ++I+ ++ T
Sbjct: 124 AQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR-EGAK 179
Query: 724 GSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + PE T+ +V+SFG++L E++T
Sbjct: 180 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 213
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 12/154 (7%)
Query: 612 LSNSNVMTPLAY--------VLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
L+ +N+M L + V+ + Y+ EY G+L D L L +A
Sbjct: 56 LAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 115
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+A+G+AF+ + DL NI + +I D L ++I+ ++ T
Sbjct: 116 AQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR-EGAK 171
Query: 724 GSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + PE T+ +V+SFG++L E++T
Sbjct: 172 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 12/154 (7%)
Query: 612 LSNSNVMTPLAY--------VLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
L+ +N+M L + V+ + Y+ EY G+L D L L +A
Sbjct: 62 LAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 121
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+A+G+AF+ + DL NI + +I D L ++I+ ++ T
Sbjct: 122 AQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR-EGAK 177
Query: 724 GSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + PE T+ +V+SFG++L E++T
Sbjct: 178 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 91/200 (45%), Gaps = 23/200 (11%)
Query: 568 FSTYYKAV-MPSG----MSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLA 622
F T YK + +P G + IK LN + ++ +F E ++ + + +++ L
Sbjct: 51 FGTVYKGIWVPEGETVKIPVAIKILN---ETTGPKANVEFMDEALIMASMDHPHLVRLLG 107
Query: 623 YVLASDSAYLFYEYAPKGTLFDVLHGCLENA-----LDWASRYSIAVGVAQGLAFLHGFT 677
L S + L + P G L + +H +N L+W V +A+G+ +L
Sbjct: 108 VCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWC------VQIAKGMMYLE--- 157
Query: 678 SNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTM 737
++ DL+ RN+ +KS +I D L ++++ + + + ++ E +
Sbjct: 158 ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYR 217
Query: 738 RVTMAGNVYSFGVILLELLT 757
+ T +V+S+GV + EL+T
Sbjct: 218 KFTHQSDVWSYGVTIWELMT 237
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 75/162 (46%), Gaps = 15/162 (9%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENA-----LD 655
+F E ++ + + +++ L L S + L + P G L + +H +N L+
Sbjct: 63 EFMDEALIMASMDHPHLVRLLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLN 121
Query: 656 WASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715
W V +A+G+ +L ++ DL+ RN+ +KS +I D L ++++ +
Sbjct: 122 WC------VQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK 172
Query: 716 TGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + ++ E + + T +V+S+GV + EL+T
Sbjct: 173 EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 85/199 (42%), Gaps = 29/199 (14%)
Query: 581 SYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKG 640
+Y IK++ ++ + K +E++ L KL + ++ L ++ +PK
Sbjct: 32 NYAIKRIRLPNREL---AREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKV 88
Query: 641 TLFDVLHGCL-ENALDWAS-RYSIA-----------VGVAQGLAFLHGFTSNPILLLDLS 687
L+ + C EN DW + R +I + +A+ + FLH S ++ DL
Sbjct: 89 YLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLK 145
Query: 688 TRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV-------AGSVG---YIPPEYAYTM 737
NIF ++GD L +D + ++ T G VG Y+ PE +
Sbjct: 146 PSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGN 205
Query: 738 RVTMAGNVYSFGVILLELL 756
+ +++S G+IL ELL
Sbjct: 206 SYSHKVDIFSLGLILFELL 224
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 76/199 (38%), Gaps = 29/199 (14%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVL--HG------- 648
+ F +E E+L L + +++ + +EY G L L HG
Sbjct: 63 ARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLA 122
Query: 649 ----CLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDI 704
L ++A VA G+ +L G + DL+TRN + +IGD
Sbjct: 123 GGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDF 179
Query: 705 ELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKT--- 760
+ + I + + ++PPE + T +V+SFGV+L E+ T GK
Sbjct: 180 GMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 239
Query: 761 ---------AVNQGNELAK 770
+ QG EL +
Sbjct: 240 QLSNTEAIDCITQGRELER 258
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 12/154 (7%)
Query: 612 LSNSNVMTPLAY--------VLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
L+ +N+M L + V+ + Y+ EY G+L D L L +A
Sbjct: 66 LAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 125
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+A+G+AF+ + DL NI + +I D L ++I+ ++ T
Sbjct: 126 AQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR-EGAK 181
Query: 724 GSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + PE T+ +V+SFG++L E++T
Sbjct: 182 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 215
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 61/157 (38%), Gaps = 8/157 (5%)
Query: 613 SNSNVMTPLAYVLASDSAYLF-YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLA 671
S +T L Y + F EYA G LF H E + L
Sbjct: 208 SRHPFLTALKYSFQTHDRLCFVMEYANGGELF--FHLSRERVFSEDRARFYGAEIVSALD 265
Query: 672 FLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPP 731
+LH + ++ DL N+ L +I D LCK + K ++ T G+ Y+ P
Sbjct: 266 YLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEYLAP 321
Query: 732 EYAYTMRVTMAGNVYSFGVILLELLTGKTA-VNQGNE 767
E A + + GV++ E++ G+ NQ +E
Sbjct: 322 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 358
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 6/162 (3%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
KE+ + L++ NV+ + + YLF EY G LFD + + A R+
Sbjct: 54 KEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 113
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+ G+ +LHG I D+ N+ L +I D L V + L+ +
Sbjct: 114 --LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX 168
Query: 724 GSVGYIPPEYAYTMRVTMAG-NVYSFGVILLELLTGKTAVNQ 764
G++ Y+ PE +V+S G++L +L G+ +Q
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 76/199 (38%), Gaps = 29/199 (14%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVL--HG------- 648
+ F +E E+L L + +++ + +EY G L L HG
Sbjct: 57 ARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLA 116
Query: 649 ----CLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDI 704
L ++A VA G+ +L G + DL+TRN + +IGD
Sbjct: 117 GGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDF 173
Query: 705 ELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKT--- 760
+ + I + + ++PPE + T +V+SFGV+L E+ T GK
Sbjct: 174 GMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 233
Query: 761 ---------AVNQGNELAK 770
+ QG EL +
Sbjct: 234 QLSNTEAIDCITQGRELER 252
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 7/159 (4%)
Query: 602 FDKELEVLGKLSNSNVMT--PLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASR 659
F +E+++L L + ++ ++Y L EY P G L D L LD +
Sbjct: 55 FQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQR-HRARLDASRL 113
Query: 660 YSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSL 719
+ + +G+ +L S + DL+ RNI ++S +I D L K++ K +
Sbjct: 114 LLYSSQICKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVV 170
Query: 720 STVAGS-VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
S + + PE + +V+SFGV+L EL T
Sbjct: 171 REPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 61/157 (38%), Gaps = 8/157 (5%)
Query: 613 SNSNVMTPLAYVLASDSAYLF-YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLA 671
S +T L Y + F EYA G LF H E + L
Sbjct: 205 SRHPFLTALKYSFQTHDRLCFVMEYANGGELF--FHLSRERVFSEDRARFYGAEIVSALD 262
Query: 672 FLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPP 731
+LH + ++ DL N+ L +I D LCK + K ++ T G+ Y+ P
Sbjct: 263 YLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEYLAP 318
Query: 732 EYAYTMRVTMAGNVYSFGVILLELLTGKTA-VNQGNE 767
E A + + GV++ E++ G+ NQ +E
Sbjct: 319 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 355
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 56/253 (22%), Positives = 101/253 (39%), Gaps = 22/253 (8%)
Query: 580 MSYFIKKLNWSDKIFQLG--SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYA 637
+ Y++ K + K + G S F +E EV+ KLS+ ++ L L E+
Sbjct: 26 LGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85
Query: 638 PKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLK 697
G L D L + + + V +G+A+L ++ DL+ RN + +
Sbjct: 86 EHGCLSDYLR-TQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQ 141
Query: 698 EPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
++ D + + + + T S T V + PE R + +V+SFGV++ E+ +
Sbjct: 142 VIKVSDFGMTRFVLDDQYTSSTGT-KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 200
Query: 758 GKTAVNQGNELAKWVLRNSAQQDKLDHI-LDFNVSRTSLAVRSQMLTVLKVAVACVSVSP 816
K N + + ++ I F + + LA V ++ C P
Sbjct: 201 E----------GKIPYENRSNSEVVEDISTGFRLYKPRLASTH----VYQIMNHCWRERP 246
Query: 817 EARPKMKSVLRML 829
E RP +LR L
Sbjct: 247 EDRPAFSRLLRQL 259
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 23/200 (11%)
Query: 568 FSTYYKAV-MPSGMSYFIKKLNWSDKIFQLGSHHKFDKEL----EVLGKLSNSNVMTPLA 622
F T YK + +P G + K+ + K+ + + K +KE+ V+ + + V L
Sbjct: 30 FGTVYKGIWIPDGENV---KIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLG 86
Query: 623 YVLASDSAYLFYEYAPKGTLFDVLH---GCL--ENALDWASRYSIAVGVAQGLAFLHGFT 677
L S + L + P G L D + G L ++ L+W + +A+G+++L
Sbjct: 87 ICLTS-TVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQ------IAKGMSYLEDVR 139
Query: 678 SNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTM 737
++ DL+ RN+ +KS +I D L +++D ++ + ++ E
Sbjct: 140 ---LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRR 196
Query: 738 RVTMAGNVYSFGVILLELLT 757
R T +V+S+GV + EL+T
Sbjct: 197 RFTHQSDVWSYGVTVWELMT 216
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 76/199 (38%), Gaps = 29/199 (14%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVL--HG------- 648
+ F +E E+L L + +++ + +EY G L L HG
Sbjct: 86 ARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLA 145
Query: 649 ----CLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDI 704
L ++A VA G+ +L G + DL+TRN + +IGD
Sbjct: 146 GGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDF 202
Query: 705 ELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKT--- 760
+ + I + + ++PPE + T +V+SFGV+L E+ T GK
Sbjct: 203 GMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 262
Query: 761 ---------AVNQGNELAK 770
+ QG EL +
Sbjct: 263 QLSNTEAIDCITQGRELER 281
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 68/163 (41%), Gaps = 22/163 (13%)
Query: 627 SDSAYLFYEYAPKGTLFDVLHG--CLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLL 684
+D Y +Y G LF L C L+ +R+ A +A L +LH I+
Sbjct: 111 ADKLYFVLDYINGGELFYHLQRERCF---LEPRARF-YAAEIASALGYLHSLN---IVYR 163
Query: 685 DLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGN 744
DL NI L S + D LCK + + + ST G+ Y+ PE + +
Sbjct: 164 DLKPENILLDSQGHIVLTDFGLCK--ENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVD 221
Query: 745 VYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILD 787
+ G +L E+L G L + RN+A+ D+IL+
Sbjct: 222 WWCLGAVLYEMLYG---------LPPFYSRNTAEM--YDNILN 253
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 69/166 (41%), Gaps = 19/166 (11%)
Query: 606 LEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHG--------------CLE 651
++++GK + N++T L Y+ EYA KG L + L E
Sbjct: 94 MKMIGK--HKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 652 NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711
+ + S +A+G+ +L S + DL+ RN+ + +I D L + I+
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 712 PSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ V ++ PE + T +V+SFGV++ E+ T
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 14/160 (8%)
Query: 603 DKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSI 662
+ E+ VL K+ + N++T ++ YL + G LFD + LE + S+
Sbjct: 54 ENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRI---LERGVYTEKDASL 110
Query: 663 AVG-VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQ---IGDIELCKVIDPSKSTGS 718
+ V + +LH N I+ DL N+ + +E I D L K+ + G
Sbjct: 111 VIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGI 163
Query: 719 LSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 758
+ST G+ GY+ PE + A + +S GVI LL G
Sbjct: 164 MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 22/161 (13%)
Query: 632 LFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLH-----GFTSNP-ILLLD 685
L EY P G+L L + DW S +A V +GLA+LH G P I D
Sbjct: 89 LVMEYYPNGSLXKYLSL---HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRD 145
Query: 686 LSTRNIFLKSLKEPQIGDIELC------KVIDPSKSTGSLSTVAGSVGYIPPEY---AYT 736
L++RN+ +K+ I D L +++ P + + + G++ Y+ PE A
Sbjct: 146 LNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVN 205
Query: 737 MRVTMAG----NVYSFGVILLELLTGKTAVNQGNELAKWVL 773
+R + ++Y+ G+I E+ T + G + ++ +
Sbjct: 206 LRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQM 246
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 15/182 (8%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVL--HGCLENALD 655
S K +E+ ++ L++ N++ + + YL EYA G +FD L HG ++ +
Sbjct: 57 SLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEK-E 115
Query: 656 WASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715
S++ V Q + H I+ DL N+ L + +I D +
Sbjct: 116 ARSKFRQIVSAVQ---YCH---QKRIVHRDLKAENLLLDADMNIKIADFGFS---NEFTV 166
Query: 716 TGSLSTVAGSVGYIPPEYAYTMRVTMAG-NVYSFGVILLELLTGKTAVNQGN--ELAKWV 772
G L G+ Y PE + +V+S GVIL L++G + N EL + V
Sbjct: 167 GGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 226
Query: 773 LR 774
LR
Sbjct: 227 LR 228
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 43.5 bits (101), Expect = 5e-04, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 6/162 (3%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
KE+ + L++ NV+ + + YLF EY G LFD + + A R+
Sbjct: 54 KEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 113
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+ G+ +LHG I D+ N+ L +I D L V + L+ +
Sbjct: 114 --LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 724 GSVGYIPPEYAYTMRVTMAG-NVYSFGVILLELLTGKTAVNQ 764
G++ Y+ PE +V+S G++L +L G+ +Q
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 74/166 (44%), Gaps = 16/166 (9%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHG------CLE 651
S F +E ++ L + ++ A V + Y+ E+ KG+L D L L
Sbjct: 50 SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLP 109
Query: 652 NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711
+D++++ +A+G+A++ + DL N+ + +I D L +VI+
Sbjct: 110 KLIDFSAQ------IAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIE 160
Query: 712 PSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
++ T + + PE T+ NV+SFG++L E++T
Sbjct: 161 DNEYTAR-EGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVT 205
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 94/203 (46%), Gaps = 18/203 (8%)
Query: 122 IGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQNKFSGSVPGGITRFLRNLDLSY 181
+ L+ LE L +S+N + + LA +T L A N+ S P GI L L L+
Sbjct: 168 LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNG 225
Query: 182 NKLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMSPNLVRLRLGTNLLIGEIPSATFTS 241
N+L + L S NL +DL+ N + P + L L+LG N + P A T+
Sbjct: 226 NQLKDIGT--LASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTA 283
Query: 242 LEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNGSLPIQLGSLGILQVMNLQLN 301
LT LEL+ N + P + + ++LT L L N ++ P+ SL LQ + N
Sbjct: 284 ---LTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPV--SSLTKLQRLFFSNN 336
Query: 302 KLSGEIPSQFSQLKLLSTMNISW 324
K+ S S L L+ NI+W
Sbjct: 337 KV-----SDVSSLANLT--NINW 352
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 43.5 bits (101), Expect = 5e-04, Method: Composition-based stats.
Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 12/154 (7%)
Query: 612 LSNSNVMTPLAY--------VLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
L+ +N+M L + V+ + Y+ EY G+L D L L +A
Sbjct: 52 LAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 111
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+A+G+AF+ + +L NI + +I D L ++I+ ++ T
Sbjct: 112 AQIAEGMAFIE---ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAR-EGAK 167
Query: 724 GSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + PE T+ +V+SFG++L E++T
Sbjct: 168 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 201
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 94/203 (46%), Gaps = 18/203 (8%)
Query: 122 IGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQNKFSGSVPGGITRFLRNLDLSY 181
+ L+ LE L +S+N + + LA +T L A N+ S P GI L L L+
Sbjct: 172 LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNG 229
Query: 182 NKLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMSPNLVRLRLGTNLLIGEIPSATFTS 241
N+L + L S NL +DL+ N + P + L L+LG N + P A T+
Sbjct: 230 NQLKDIGT--LASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTA 287
Query: 242 LEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNGSLPIQLGSLGILQVMNLQLN 301
LT LEL+ N + P + + ++LT L L N ++ P+ SL LQ + N
Sbjct: 288 ---LTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPV--SSLTKLQRLFFANN 340
Query: 302 KLSGEIPSQFSQLKLLSTMNISW 324
K+ S S L L+ NI+W
Sbjct: 341 KV-----SDVSSLANLT--NINW 356
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 85/195 (43%), Gaps = 11/195 (5%)
Query: 1 MQSCGGIDGLKLLNFSKNELVSLPTFNGFAGLEVLDFSSNNLNGNINLQFDELVXXXXXX 60
+ + G+ L+ L+F N++ L LE LD SSN + +I++ +L
Sbjct: 148 ISALSGLTSLQQLSFG-NQVTDLKPLANLTTLERLDISSNKV-SDISV-LAKLTNLESLI 204
Query: 61 XXXXXXXGFLPINLGKTKALEELVLSGNAFHGEIPKGIADYRNLTLIDLSANNLSGSVPD 120
P LG L+EL L+GN +A NLT +DL+ N +S P
Sbjct: 205 ATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP- 259
Query: 121 RIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQNKFSGSVPGGITRFLRNLDLS 180
+ L+KL L L AN + P LA +T L+ N+N+ P + L L L
Sbjct: 260 -LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISPISNLKNLTYLTLY 316
Query: 181 YNKLLGVIPIDLLSH 195
+N + + P+ L+
Sbjct: 317 FNNISDISPVSSLTK 331
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 99/250 (39%), Gaps = 41/250 (16%)
Query: 588 NWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLH 647
N+S+ F+ S ++ KLS+ +++ + D L E+ G+L D
Sbjct: 54 NYSESFFEAAS---------MMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSL-DTYL 103
Query: 648 GCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELC 707
+N ++ + +A +A + FL N ++ ++ +NI L ++ + G+
Sbjct: 104 KKNKNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFI 160
Query: 708 KVIDPSKSTGSL--STVAGSVGYIPPEYAYTMR-VTMAGNVYSFGVILLELLTGKTAVNQ 764
K+ DP S L + + ++PPE + + +A + +SFG L E+ +G
Sbjct: 161 KLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGG----- 215
Query: 765 GNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVA-----CVSVSPEAR 819
DK LD R Q+ +A C+ P+ R
Sbjct: 216 ---------------DKPLSALDSQRKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHR 260
Query: 820 PKMKSVLRML 829
P ++++R L
Sbjct: 261 PSFRAIIRDL 270
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 94/203 (46%), Gaps = 18/203 (8%)
Query: 122 IGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQNKFSGSVPGGITRFLRNLDLSY 181
+ L+ LE L +S+N + + LA +T L A N+ S P GI L L L+
Sbjct: 173 LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNG 230
Query: 182 NKLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMSPNLVRLRLGTNLLIGEIPSATFTS 241
N+L + L S NL +DL+ N + P + L L+LG N + P A T+
Sbjct: 231 NQLKDIGT--LASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTA 288
Query: 242 LEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNGSLPIQLGSLGILQVMNLQLN 301
LT LEL+ N + P + + ++LT L L N ++ P+ SL LQ + N
Sbjct: 289 ---LTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPV--SSLTKLQRLFFYNN 341
Query: 302 KLSGEIPSQFSQLKLLSTMNISW 324
K+ S S L L+ NI+W
Sbjct: 342 KV-----SDVSSLANLT--NINW 357
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 85/195 (43%), Gaps = 11/195 (5%)
Query: 1 MQSCGGIDGLKLLNFSKNELVSLPTFNGFAGLEVLDFSSNNLNGNINLQFDELVXXXXXX 60
+ + G+ L+ L+F N++ L LE LD SSN + +I++ +L
Sbjct: 149 ISALSGLTSLQQLSFG-NQVTDLKPLANLTTLERLDISSNKV-SDISV-LAKLTNLESLI 205
Query: 61 XXXXXXXGFLPINLGKTKALEELVLSGNAFHGEIPKGIADYRNLTLIDLSANNLSGSVPD 120
P LG L+EL L+GN +A NLT +DL+ N +S P
Sbjct: 206 ATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP- 260
Query: 121 RIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQNKFSGSVPGGITRFLRNLDLS 180
+ L+KL L L AN + P LA +T L+ N+N+ P + L L L
Sbjct: 261 -LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISPISNLKNLTYLTLY 317
Query: 181 YNKLLGVIPIDLLSH 195
+N + + P+ L+
Sbjct: 318 FNNISDISPVSSLTK 332
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 74/166 (44%), Gaps = 16/166 (9%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHG------CLE 651
S F +E ++ L + ++ A V + Y+ EY KG+L D L L
Sbjct: 51 SVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLP 110
Query: 652 NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711
+D++++ +A+G+A++ + DL N+ + +I D L +VI+
Sbjct: 111 KLIDFSAQ------IAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIE 161
Query: 712 PSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
++ T + + PE T+ +V+SFG++L E++T
Sbjct: 162 DNEYTAR-EGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVT 206
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 94/203 (46%), Gaps = 18/203 (8%)
Query: 122 IGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQNKFSGSVPGGITRFLRNLDLSY 181
+ L+ LE L +S+N + + LA +T L A N+ S P GI L L L+
Sbjct: 168 LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNG 225
Query: 182 NKLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMSPNLVRLRLGTNLLIGEIPSATFTS 241
N+L + L S NL +DL+ N + P + L L+LG N + P A T+
Sbjct: 226 NQLKDIGT--LASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTA 283
Query: 242 LEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNGSLPIQLGSLGILQVMNLQLN 301
LT LEL+ N + P + + ++LT L L N ++ P+ SL LQ + N
Sbjct: 284 ---LTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPV--SSLTKLQRLFFYNN 336
Query: 302 KLSGEIPSQFSQLKLLSTMNISW 324
K+ S S L L+ NI+W
Sbjct: 337 KV-----SDVSSLANLT--NINW 352
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 97/236 (41%), Gaps = 28/236 (11%)
Query: 605 ELEVLGKL-SNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
EL+++ L + N++ L + EY G L + L E LD +
Sbjct: 91 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLE 150
Query: 664 V--------GVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715
+ VAQG+AFL S + D++ RN+ L + +IGD L + I +
Sbjct: 151 LRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 207
Query: 716 TGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRN 775
V ++ PE + T+ +V+S+G++L E+ + G +L N
Sbjct: 208 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG------ILVN 261
Query: 776 SAQQDKLDHILD--FNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRML 829
S K ++ + +++ + A ++ + + AC ++ P RP + + L
Sbjct: 262 S----KFYKLVKDGYQMAQPAFAPKN----IYSIMQACWALEPTHRPTFQQICSFL 309
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 24/168 (14%)
Query: 605 ELEVLGKLSNSNVMTP------LAYVLASDSAYLFYEYAPKGTLFDVLHGCLENA--LDW 656
E++++ KL++ NV++ L + +D L EY G L L+ EN L
Sbjct: 62 EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQ-FENCCGLKE 120
Query: 657 ASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQ-----IGDIELCKVID 711
++ ++ L +LH N I+ DL NI L+ PQ I D+ K +D
Sbjct: 121 GPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQP--GPQRLIHKIIDLGYAKELD 175
Query: 712 PSKSTGSLST-VAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 758
G L T G++ Y+ PE + T+ + +SFG + E +TG
Sbjct: 176 ----QGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 24/168 (14%)
Query: 605 ELEVLGKLSNSNVMTP------LAYVLASDSAYLFYEYAPKGTLFDVLHGCLENA--LDW 656
E++++ KL++ NV++ L + +D L EY G L L+ EN L
Sbjct: 63 EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQ-FENCCGLKE 121
Query: 657 ASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQ-----IGDIELCKVID 711
++ ++ L +LH N I+ DL NI L+ PQ I D+ K +D
Sbjct: 122 GPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQP--GPQRLIHKIIDLGYAKELD 176
Query: 712 PSKSTGSLST-VAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 758
G L T G++ Y+ PE + T+ + +SFG + E +TG
Sbjct: 177 ----QGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 72/174 (41%), Gaps = 31/174 (17%)
Query: 612 LSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY-SIAVGVAQGL 670
L N + P V + ++ EY TL+D++H EN Y + + + L
Sbjct: 72 LERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHS--ENLNQQRDEYWRLFRQILEAL 129
Query: 671 AFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS------------KSTGS 718
+++H S I+ +L NIF+ + +IGD L K + S S+ +
Sbjct: 130 SYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 719 LSTVAGSVGYIPPEY-----AYTMRVTMAGNVYSFGVILLELL----TGKTAVN 763
L++ G+ Y+ E Y ++ + YS G+I E + TG VN
Sbjct: 187 LTSAIGTAXYVATEVLDGTGHYNEKI----DXYSLGIIFFEXIYPFSTGXERVN 236
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 68/166 (40%), Gaps = 19/166 (11%)
Query: 606 LEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHG--------------CLE 651
++++GK + N++ L Y+ EYA KG L + L E
Sbjct: 94 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPE 151
Query: 652 NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711
+ + S +A+G+ +L S + DL+ RN+ + +I D L + I+
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 712 PSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ V ++ PE + T +V+SFGV++ E+ T
Sbjct: 209 NIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 6/162 (3%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
KE+ + L++ NV+ + + YLF EY G LFD + + A R+
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+ G+ +LHG I D+ N+ L +I D L V + L+ +
Sbjct: 113 --LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 724 GSVGYIPPEYAYTMRVTMAG-NVYSFGVILLELLTGKTAVNQ 764
G++ Y+ PE +V+S G++L +L G+ +Q
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 6/162 (3%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
KE+ + L++ NV+ + + YLF EY G LFD + + A R+
Sbjct: 54 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 113
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+ G+ +LHG I D+ N+ L +I D L V + L+ +
Sbjct: 114 --LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 724 GSVGYIPPEYAYTMRVTMAG-NVYSFGVILLELLTGKTAVNQ 764
G++ Y+ PE +V+S G++L +L G+ +Q
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 69/162 (42%), Gaps = 12/162 (7%)
Query: 605 ELEVLGKL-SNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
EL+++ L + N++ L + EY G L + L E LD +
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLE 158
Query: 664 V--------GVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715
+ VAQG+AFL S + D++ RN+ L + +IGD L + I +
Sbjct: 159 LRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 215
Query: 716 TGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
V ++ PE + T+ +V+S+G++L E+ +
Sbjct: 216 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 6/162 (3%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
KE+ + L++ NV+ + + YLF EY G LFD + + A R+
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+ G+ +LHG I D+ N+ L +I D L V + L+ +
Sbjct: 113 --LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 724 GSVGYIPPEYAYTMRVTMAG-NVYSFGVILLELLTGKTAVNQ 764
G++ Y+ PE +V+S G++L +L G+ +Q
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 6/162 (3%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
KE+ + L++ NV+ + + YLF EY G LFD + + A R+
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+ G+ +LHG I D+ N+ L +I D L V + L+ +
Sbjct: 113 --LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 724 GSVGYIPPEYAYTMRVTMAG-NVYSFGVILLELLTGKTAVNQ 764
G++ Y+ PE +V+S G++L +L G+ +Q
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 6/162 (3%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
KE+ + L++ NV+ + + YLF EY G LFD + + A R+
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+ G+ +LHG I D+ N+ L +I D L V + L+ +
Sbjct: 113 --LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 724 GSVGYIPPEYAYTMRVTMAG-NVYSFGVILLELLTGKTAVNQ 764
G++ Y+ PE +V+S G++L +L G+ +Q
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 6/162 (3%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
KE+ + L++ NV+ + + YLF EY G LFD + + A R+
Sbjct: 54 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 113
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+ G+ +LHG I D+ N+ L +I D L V + L+ +
Sbjct: 114 --LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 724 GSVGYIPPEYAYTMRVTMAG-NVYSFGVILLELLTGKTAVNQ 764
G++ Y+ PE +V+S G++L +L G+ +Q
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 98/238 (41%), Gaps = 26/238 (10%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENA------LDWA 657
KE++ + + + N+++ + D +L + G++ D++ + LD +
Sbjct: 62 KEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDES 121
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG 717
+ +I V +GL +LH N + D+ NI L QI D + + +TG
Sbjct: 122 TIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFL----ATG 174
Query: 718 S-------LSTVAGSVGYIPPEYAYTMR-VTMAGNVYSFGVILLELLTGKTAVNQGNELA 769
T G+ ++ PE +R +++SFG+ +EL TG ++ +
Sbjct: 175 GDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK 234
Query: 770 KWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLR 827
VL + Q D L+ V + ++ + K+ C+ PE RP +LR
Sbjct: 235 --VLMLTLQNDPPS--LETGVQDKEM-LKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 68/166 (40%), Gaps = 19/166 (11%)
Query: 606 LEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHG--------------CLE 651
++++GK + N++ L Y+ EYA KG L + L E
Sbjct: 94 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 652 NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711
+ + S +A+G+ +L S + DL+ RN+ + +I D L + I+
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 712 PSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ V ++ PE + T +V+SFGV++ E+ T
Sbjct: 209 NIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 59/152 (38%), Gaps = 9/152 (5%)
Query: 618 MTPLAYVLASDSAYLF-YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGF 676
+T L Y + F EYA G LF H E + L +LH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARFYGAEIVSALEYLH-- 122
Query: 677 TSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYT 736
S ++ D+ N+ L +I D LCK + ++ T G+ Y+ PE
Sbjct: 123 -SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLED 179
Query: 737 MRVTMAGNVYSFGVILLELLTGKTAV-NQGNE 767
A + + GV++ E++ G+ NQ +E
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 663 AVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
A + GL LH I+ DL NI L +I D+ L V P T +
Sbjct: 292 AAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGL-AVHVPEGQT--IKGR 345
Query: 723 AGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQ 764
G+VGY+ PE R T + + ++ G +L E++ G++ Q
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 42.7 bits (99), Expect = 8e-04, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 6/162 (3%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
KE+ + L++ NV+ + + YLF EY G LFD + + A R+
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+ G+ +LHG I D+ N+ L +I D L V + L+ +
Sbjct: 113 --LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX 167
Query: 724 GSVGYIPPEYAYTMRVTMAG-NVYSFGVILLELLTGKTAVNQ 764
G++ Y+ PE +V+S G++L +L G+ +Q
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 13/131 (9%)
Query: 632 LFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNI 691
L EYA G +F + CL + S + + Q L ++ N I+ LDL +NI
Sbjct: 106 LILEYAAGGEIFSL---CLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNI 162
Query: 692 FLKSLKEPQIGDIELCKVID--PSKSTG---SLSTVAGSVGYIPPEYAYTMRVTMAGNVY 746
L S+ +GDI K++D S+ G L + G+ Y+ PE +T A +++
Sbjct: 163 LLSSIY--PLGDI---KIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMW 217
Query: 747 SFGVILLELLT 757
+ G+I LLT
Sbjct: 218 NIGIIAYMLLT 228
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 26/185 (14%)
Query: 592 KIFQLGSHHKFDKELEVLGK--LSNSNVMTPLAYVLASDSA----YLFYEYAPKGTLFDV 645
KIF + +E E+ L + N++ +A + S + +L Y G+L+D
Sbjct: 66 KIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDY 125
Query: 646 LHGCLENALDWASRYSIAVGVAQGLAFLH----GFTSNP-ILLLDLSTRNIFLKSLKEPQ 700
L LD S I + +A GLA LH G P I DL ++NI +K +
Sbjct: 126 LQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCC 182
Query: 701 IGDIELCKVIDPSKSTGSLST----VAGSVGYIPPEY-AYTMRVTMAG-----NVYSFGV 750
I D+ L + S+ST L G+ Y+ PE T++V ++++FG+
Sbjct: 183 IADLGL--AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGL 240
Query: 751 ILLEL 755
+L E+
Sbjct: 241 VLWEV 245
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 663 AVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
A + GL LH I+ DL NI L +I D+ L V P T +
Sbjct: 292 AAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGL-AVHVPEGQT--IKGR 345
Query: 723 AGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQ 764
G+VGY+ PE R T + + ++ G +L E++ G++ Q
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 59/152 (38%), Gaps = 9/152 (5%)
Query: 618 MTPLAYVLASDSAYLF-YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGF 676
+T L Y + F EYA G LF H E + L +LH
Sbjct: 70 LTALKYAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARFYGAEIVSALEYLH-- 125
Query: 677 TSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYT 736
S ++ D+ N+ L +I D LCK + ++ T G+ Y+ PE
Sbjct: 126 -SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLED 182
Query: 737 MRVTMAGNVYSFGVILLELLTGKTAV-NQGNE 767
A + + GV++ E++ G+ NQ +E
Sbjct: 183 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 214
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 59/152 (38%), Gaps = 9/152 (5%)
Query: 618 MTPLAYVLASDSAYLF-YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGF 676
+T L Y + F EYA G LF H E + L +LH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARFYGAEIVSALEYLH-- 122
Query: 677 TSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYT 736
S ++ D+ N+ L +I D LCK + ++ T G+ Y+ PE
Sbjct: 123 -SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLED 179
Query: 737 MRVTMAGNVYSFGVILLELLTGKTAV-NQGNE 767
A + + GV++ E++ G+ NQ +E
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 98/238 (41%), Gaps = 26/238 (10%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENA------LDWA 657
KE++ + + + N+++ + D +L + G++ D++ + LD +
Sbjct: 57 KEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDES 116
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG 717
+ +I V +GL +LH N + D+ NI L QI D + + +TG
Sbjct: 117 TIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFL----ATG 169
Query: 718 S-------LSTVAGSVGYIPPEYAYTMR-VTMAGNVYSFGVILLELLTGKTAVNQGNELA 769
T G+ ++ PE +R +++SFG+ +EL TG ++ +
Sbjct: 170 GDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK 229
Query: 770 KWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLR 827
VL + Q D L+ V + ++ + K+ C+ PE RP +LR
Sbjct: 230 --VLMLTLQNDPPS--LETGVQDKEM-LKKYGKSFRKMISLCLQKDPEKRPTAAELLR 282
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
VAQG+AFL S + D++ RN+ L + +IGD L + I +
Sbjct: 175 VAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 231
Query: 726 VGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHI 785
V ++ PE + T+ +V+S+G++L E+ + G +L NS K +
Sbjct: 232 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG------ILVNS----KFYKL 281
Query: 786 LD--FNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRML 829
+ + +++ + A ++ + + AC ++ P RP + + L
Sbjct: 282 VKDGYQMAQPAFAPKN----IYSIMQACWALEPTHRPTFQQICSFL 323
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 70/159 (44%), Gaps = 7/159 (4%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY 660
K E+ + L++ +V+ + +D ++ E + +L + LH + + +RY
Sbjct: 63 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARY 121
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
+ + G +LH N ++ DL N+FL E +IGD L ++
Sbjct: 122 YLR-QIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK-- 175
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGK 759
T+ G+ YI PE + +V+S G I+ LL GK
Sbjct: 176 TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
VAQG+AFL S + D++ RN+ L + +IGD L + I +
Sbjct: 167 VAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 223
Query: 726 VGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHI 785
V ++ PE + T+ +V+S+G++L E+ + G +L NS K +
Sbjct: 224 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG------ILVNS----KFYKL 273
Query: 786 LD--FNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRML 829
+ + +++ + A ++ + + AC ++ P RP + + L
Sbjct: 274 VKDGYQMAQPAFAPKN----IYSIMQACWALEPTHRPTFQQICSFL 315
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 70/159 (44%), Gaps = 7/159 (4%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY 660
K E+ + L++ +V+ + +D ++ E + +L + LH + + +RY
Sbjct: 63 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARY 121
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
+ + G +LH N ++ DL N+FL E +IGD L ++
Sbjct: 122 YLR-QIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK-- 175
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGK 759
T+ G+ YI PE + +V+S G I+ LL GK
Sbjct: 176 TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 12/167 (7%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
+E+++L +L + N+M + YL E G LFD + + A+R I
Sbjct: 75 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--II 132
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEP---QIGDIELCKVIDPSKSTGSLS 720
V G+ ++H N I+ DL N+ L+S + +I D L + SK +
Sbjct: 133 RQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK---MK 186
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNE 767
G+ YI PE + +V+S GVIL LL+G N NE
Sbjct: 187 DKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANE 232
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 26/185 (14%)
Query: 592 KIFQLGSHHKFDKELEVLGK--LSNSNVMTPLAYVLASDSA----YLFYEYAPKGTLFDV 645
KIF + +E E+ L + N++ +A + S + +L Y G+L+D
Sbjct: 37 KIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDY 96
Query: 646 LHGCLENALDWASRYSIAVGVAQGLAFLH----GFTSNP-ILLLDLSTRNIFLKSLKEPQ 700
L LD S I + +A GLA LH G P I DL ++NI +K +
Sbjct: 97 LQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCC 153
Query: 701 IGDIELCKVIDPSKSTGSLST----VAGSVGYIPPEY-AYTMRVTMAG-----NVYSFGV 750
I D+ L + S+ST L G+ Y+ PE T++V ++++FG+
Sbjct: 154 IADLGL--AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGL 211
Query: 751 ILLEL 755
+L E+
Sbjct: 212 VLWEV 216
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 12/167 (7%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
+E+++L +L + N+M + YL E G LFD + + A+R I
Sbjct: 99 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--II 156
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEP---QIGDIELCKVIDPSKSTGSLS 720
V G+ ++H N I+ DL N+ L+S + +I D L + SK +
Sbjct: 157 RQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK---MK 210
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNE 767
G+ YI PE + +V+S GVIL LL+G N NE
Sbjct: 211 DKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANE 256
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 11/157 (7%)
Query: 605 ELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAV 664
E ++G+ + N++ V S + EY G+L L + +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK-HDAQFTVIQLVGMLR 154
Query: 665 GVAQGLAFLH--GFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
G+A G+ +L GF DL+ RNI + S ++ D L +V++ + +T
Sbjct: 155 GIASGMKYLSDMGFVHR-----DLAARNILINSNLVCKVSDFGLSRVLE-DDPEAAYTTR 208
Query: 723 AGSV--GYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
G + + PE + T A +V+S+G++L E+++
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 26/185 (14%)
Query: 592 KIFQLGSHHKFDKELEVLGK--LSNSNVMTPLAYVLASDSA----YLFYEYAPKGTLFDV 645
KIF + +E E+ L + N++ +A + S + +L Y G+L+D
Sbjct: 37 KIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDY 96
Query: 646 LHGCLENALDWASRYSIAVGVAQGLAFLH----GFTSNP-ILLLDLSTRNIFLKSLKEPQ 700
L LD S I + +A GLA LH G P I DL ++NI +K +
Sbjct: 97 LQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCC 153
Query: 701 IGDIELCKVIDPSKSTGSLST----VAGSVGYIPPEY-AYTMRVTMAG-----NVYSFGV 750
I D+ L + S+ST L G+ Y+ PE T++V ++++FG+
Sbjct: 154 IADLGL--AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGL 211
Query: 751 ILLEL 755
+L E+
Sbjct: 212 VLWEV 216
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 12/167 (7%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
+E+++L +L + N+M + YL E G LFD + + A+R I
Sbjct: 98 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--II 155
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEP---QIGDIELCKVIDPSKSTGSLS 720
V G+ ++H N I+ DL N+ L+S + +I D L + SK +
Sbjct: 156 RQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK---MK 209
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNE 767
G+ YI PE + +V+S GVIL LL+G N NE
Sbjct: 210 DKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANE 255
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 70/159 (44%), Gaps = 7/159 (4%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY 660
K E+ + L++ +V+ + +D ++ E + +L + LH + + +RY
Sbjct: 67 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARY 125
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
+ + G +LH N ++ DL N+FL E +IGD L ++
Sbjct: 126 YLR-QIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK-- 179
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGK 759
T+ G+ YI PE + +V+S G I+ LL GK
Sbjct: 180 TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 218
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 57/141 (40%), Gaps = 10/141 (7%)
Query: 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
++ +Y G LF +L A Y+ V +A L +LH S I+ DL N
Sbjct: 82 FMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLA--LEYLH---SKDIIYRDLKPEN 136
Query: 691 IFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGV 750
I L +I D K + + G+ YI PE T + + +SFG+
Sbjct: 137 ILLDKNGHIKITDFGFAKYV-----PDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGI 191
Query: 751 ILLELLTGKTAVNQGNELAKW 771
++ E+L G T N + +
Sbjct: 192 LIYEMLAGYTPFYDSNTMKTY 212
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 92/231 (39%), Gaps = 33/231 (14%)
Query: 107 IDLSANNLSGSVPDRIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQNKFSGSV 166
+D S+ L+ ++P I +K L L +N L + +T L N NK ++
Sbjct: 21 VDCSSKKLT-AIPSNIPADTK--KLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TL 76
Query: 167 PGGITRFLRNLDLSY--NKLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMSPNLVRLR 224
P GI + L+NL+ + + L +PI + Q + NL LR
Sbjct: 77 PAGIFKELKNLETLWVTDNKLQALPIGVFD----QLV-----------------NLAELR 115
Query: 225 LGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELN---- 280
L N L +P F SL KLTYL L N + SL L L N+L
Sbjct: 116 LDRNQL-KSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPE 174
Query: 281 GSLPIQLGSLGILQVMNLQLNKLSGEIPSQFSQLKLLSTMNISWNSLSGSI 331
G+ +L L L++ N QL ++ +LK+L W+ I
Sbjct: 175 GAFD-KLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCNGI 224
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
VAQG+AFL S + D++ RN+ L + +IGD L + I +
Sbjct: 173 VAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 229
Query: 726 VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
V ++ PE + T+ +V+S+G++L E+ +
Sbjct: 230 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
VAQG+AFL S + D++ RN+ L + +IGD L + I +
Sbjct: 173 VAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 229
Query: 726 VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
V ++ PE + T+ +V+S+G++L E+ +
Sbjct: 230 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 69/166 (41%), Gaps = 19/166 (11%)
Query: 606 LEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHG--------------CLE 651
++++GK + N++ L Y+ EYA KG L + L E
Sbjct: 94 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 652 NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711
+ + S +A+G+ +L S + DL+ RN+ + +I D L + I+
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 712 PSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + V ++ PE + T +V+SFGV++ E+ T
Sbjct: 209 NIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 12/167 (7%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
+E+++L +L + N+M + YL E G LFD + + A+R I
Sbjct: 81 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--II 138
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEP---QIGDIELCKVIDPSKSTGSLS 720
V G+ ++H N I+ DL N+ L+S + +I D L + SK +
Sbjct: 139 RQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK---MK 192
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNE 767
G+ YI PE + +V+S GVIL LL+G N NE
Sbjct: 193 DKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANE 238
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 18/181 (9%)
Query: 584 IKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD-SAYLFYEYAPKGTL 642
+K LN +I +G +F E ++ S+ NV++ L L S+ S + Y G L
Sbjct: 64 VKSLN---RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 120
Query: 643 FDVLHGCLENALDWASRYSIAVG--VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQ 700
+ + N + I G VA+G+ FL S + DL+ RN L +
Sbjct: 121 RNFIRNETHNP---TVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVK 174
Query: 701 IGDIELCK-VIDPSKSTGSLSTVAGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELL 756
+ D L + ++D K S+ G+ V ++ E T + T +V+SFGV+L EL+
Sbjct: 175 VADFGLARDMLD--KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 232
Query: 757 T 757
T
Sbjct: 233 T 233
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 11/135 (8%)
Query: 623 YVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPIL 682
Y+ + + ++ Y+ AP+ D L LE+ + + VA+G+ FL S +
Sbjct: 113 YLRSKRNEFVPYKVAPEDLYKDFL--TLEHLI------CYSFQVAKGMEFL---ASRKCI 161
Query: 683 LLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMA 742
DL+ RNI L +I D L + I + ++ PE + T+
Sbjct: 162 HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQ 221
Query: 743 GNVYSFGVILLELLT 757
+V+SFGV+L E+ +
Sbjct: 222 SDVWSFGVLLWEIFS 236
>pdb|3T6Q|A Chain A, Crystal Structure Of Mouse Rp105MD-1 Complex
pdb|3T6Q|B Chain B, Crystal Structure Of Mouse Rp105MD-1 Complex
Length = 606
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 112/258 (43%), Gaps = 23/258 (8%)
Query: 85 LSGNAFHGEIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLDGRLPT 144
+S N FH + L +DL+A +LS +P + LS L+ L+LSAN +
Sbjct: 269 ISSNTFHC--------FSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQI 319
Query: 145 SLASITTLSRFAANQNKFSGSVPGGITRFL---RNLDLSYNKLLGVIPIDL----LSHPN 197
S ++ +L+ + N + G L R LDLS++ + +L LSH
Sbjct: 320 SASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSH-- 377
Query: 198 LQTIDLSVN--MLEGSLPQNMSPNLVRLRLGTNLLIGEIPSATFTSLEKLTYLELDNNSF 255
LQ+++LS N + + P L L L L + + F +L L L L ++
Sbjct: 378 LQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLL 437
Query: 256 TGMIPQQLGSCRSLTLLNLAQNEL---NGSLPIQLGSLGILQVMNLQLNKLSGEIPSQFS 312
Q +L LNL N N L +LG L+++ L LS F+
Sbjct: 438 DISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFT 497
Query: 313 QLKLLSTMNISWNSLSGS 330
LK+++ +++S N L+ S
Sbjct: 498 SLKMMNHVDLSHNRLTSS 515
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 68/166 (40%), Gaps = 19/166 (11%)
Query: 606 LEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHG--------------CLE 651
++++GK + N++ L Y+ EYA KG L + L E
Sbjct: 94 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 652 NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711
+ + S +A+G+ +L S + DL+ RN+ + +I D L + I+
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDIN 208
Query: 712 PSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ V ++ PE + T +V+SFGV++ E+ T
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 68/166 (40%), Gaps = 19/166 (11%)
Query: 606 LEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHG--------------CLE 651
++++GK + N++ L Y+ EYA KG L + L E
Sbjct: 81 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 138
Query: 652 NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711
+ + S +A+G+ +L S + DL+ RN+ + +I D L + I+
Sbjct: 139 EQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDIN 195
Query: 712 PSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ V ++ PE + T +V+SFGV++ E+ T
Sbjct: 196 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 68/166 (40%), Gaps = 19/166 (11%)
Query: 606 LEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHG--------------CLE 651
++++GK + N++ L Y+ EYA KG L + L E
Sbjct: 140 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 197
Query: 652 NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711
+ + S +A+G+ +L S + DL+ RN+ + +I D L + I+
Sbjct: 198 EQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 254
Query: 712 PSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ V ++ PE + T +V+SFGV++ E+ T
Sbjct: 255 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 11/135 (8%)
Query: 623 YVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPIL 682
Y+ + + ++ Y+ AP+ D L LE+ + + VA+G+ FL S +
Sbjct: 113 YLRSKRNEFVPYKVAPEDLYKDFL--TLEHLI------CYSFQVAKGMEFL---ASRKCI 161
Query: 683 LLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMA 742
DL+ RNI L +I D L + I + ++ PE + T+
Sbjct: 162 HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQ 221
Query: 743 GNVYSFGVILLELLT 757
+V+SFGV+L E+ +
Sbjct: 222 SDVWSFGVLLWEIFS 236
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 73/175 (41%), Gaps = 25/175 (14%)
Query: 605 ELEVLGKL-SNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLE------------ 651
EL+++ +L S+ N++ L S YL +EY G L + L E
Sbjct: 98 ELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQ 157
Query: 652 ---------NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIG 702
N L + A VA+G+ FL F S + DL+ RN+ + K +I
Sbjct: 158 KRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE-FKS--CVHRDLAARNVLVTHGKVVKIC 214
Query: 703 DIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
D L + I + V ++ PE + T+ +V+S+G++L E+ +
Sbjct: 215 DFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 11/135 (8%)
Query: 623 YVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPIL 682
Y+ + + ++ Y+ AP+ D L LE+ + + VA+G+ FL S +
Sbjct: 122 YLRSKRNEFVPYKVAPEDLYKDFL--TLEHLI------CYSFQVAKGMEFL---ASRKCI 170
Query: 683 LLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMA 742
DL+ RNI L +I D L + I + ++ PE + T+
Sbjct: 171 HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQ 230
Query: 743 GNVYSFGVILLELLT 757
+V+SFGV+L E+ +
Sbjct: 231 SDVWSFGVLLWEIFS 245
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
S + VA+G+AFL S + DL+ RNI L + +I D L + I +
Sbjct: 172 SFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKG 228
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
V ++ PE + T +V+S+G+ L EL +
Sbjct: 229 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 565 KTRFSTYYKA-VMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAY 623
K F+ Y+A + +G+ IK ++ +++ G + E+++ +L + +++ Y
Sbjct: 21 KGSFAGVYRAESIHTGLEVAIKMID-KKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNY 79
Query: 624 VLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILL 683
S+ YL E G + L ++ + +R+ + + G+ +LH S+ IL
Sbjct: 80 FEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMH-QIITGMLYLH---SHGILH 135
Query: 684 LDLSTRNIFLKSLKEPQIGDIELCKVID-PSKSTGSLSTVAGSVGYIPPEYAYTMRVTMA 742
DL+ N+ L +I D L + P + T+ G+ YI PE A +
Sbjct: 136 RDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKH---YTLCGTPNYISPEIATRSAHGLE 192
Query: 743 GNVYSFGVILLELLTGK 759
+V+S G + LL G+
Sbjct: 193 SDVWSLGCMFYTLLIGR 209
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
S + VA+G+AFL S + DL+ RNI L + +I D L + I +
Sbjct: 165 SFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 221
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
V ++ PE + T +V+S+G+ L EL +
Sbjct: 222 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 16/180 (8%)
Query: 584 IKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD-SAYLFYEYAPKGTL 642
+K LN +I +G +F E ++ S+ NV++ L L S+ S + Y G L
Sbjct: 64 VKSLN---RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 120
Query: 643 FDVLHGCLENALDWASRYSIAVG--VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQ 700
+ + N + I G VA+G+ FL S + DL+ RN L +
Sbjct: 121 RNFIRNETHNP---TVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVK 174
Query: 701 IGDIELCKVIDPSKSTGSLSTVAGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ D L + + K S+ G+ V ++ E T + T +V+SFGV+L EL+T
Sbjct: 175 VADFGLARDM-YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 68/166 (40%), Gaps = 19/166 (11%)
Query: 606 LEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHG--------------CLE 651
++++GK + N++ L Y+ EYA KG L + L E
Sbjct: 94 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 652 NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711
+ + S +A+G+ +L S + DL+ RN+ + +I D L + I+
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 712 PSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ V ++ PE + T +V+SFGV++ E+ T
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 16/180 (8%)
Query: 584 IKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD-SAYLFYEYAPKGTL 642
+K LN +I +G +F E ++ S+ NV++ L L S+ S + Y G L
Sbjct: 61 VKSLN---RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 117
Query: 643 FDVLHGCLENALDWASRYSIAVG--VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQ 700
+ + N + I G VA+G+ FL S + DL+ RN L +
Sbjct: 118 RNFIRNETHNP---TVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVK 171
Query: 701 IGDIELCKVIDPSKSTGSLSTVAGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ D L + + K S+ G+ V ++ E T + T +V+SFGV+L EL+T
Sbjct: 172 VADFGLARDM-YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 68/166 (40%), Gaps = 19/166 (11%)
Query: 606 LEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHG--------------CLE 651
++++GK + N++ L Y+ EYA KG L + L E
Sbjct: 83 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 140
Query: 652 NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711
+ + S +A+G+ +L S + DL+ RN+ + +I D L + I+
Sbjct: 141 EQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 197
Query: 712 PSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ V ++ PE + T +V+SFGV++ E+ T
Sbjct: 198 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 72/182 (39%), Gaps = 15/182 (8%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVL--HGCLENALD 655
S K +E+ ++ L++ N++ + + YL EYA G +FD L HG
Sbjct: 49 SLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG------- 101
Query: 656 WASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715
W Q ++ + I+ DL N+ L + +I D +
Sbjct: 102 WMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS---NEFTF 158
Query: 716 TGSLSTVAGSVGYIPPEYAYTMRVTMAG-NVYSFGVILLELLTGKTAVNQGN--ELAKWV 772
L T GS Y PE + +V+S GVIL L++G + N EL + V
Sbjct: 159 GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 218
Query: 773 LR 774
LR
Sbjct: 219 LR 220
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 16/180 (8%)
Query: 584 IKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD-SAYLFYEYAPKGTL 642
+K LN +I +G +F E ++ S+ NV++ L L S+ S + Y G L
Sbjct: 63 VKSLN---RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 119
Query: 643 FDVLHGCLENALDWASRYSIAVG--VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQ 700
+ + N + I G VA+G+ FL S + DL+ RN L +
Sbjct: 120 RNFIRNETHNP---TVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVK 173
Query: 701 IGDIELCKVIDPSKSTGSLSTVAGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ D L + + K S+ G+ V ++ E T + T +V+SFGV+L EL+T
Sbjct: 174 VADFGLARDM-YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 60/157 (38%), Gaps = 8/157 (5%)
Query: 613 SNSNVMTPLAYVLASDSAYLF-YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLA 671
S +T L Y + F EYA G LF H E + L
Sbjct: 65 SRHPFLTALKYSFQTHDRLCFVMEYANGGELF--FHLSRERVFSEDRARFYGAEIVSALD 122
Query: 672 FLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPP 731
+LH + ++ DL N+ L +I D LCK + K ++ G+ Y+ P
Sbjct: 123 YLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAP 178
Query: 732 EYAYTMRVTMAGNVYSFGVILLELLTGKTA-VNQGNE 767
E A + + GV++ E++ G+ NQ +E
Sbjct: 179 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 215
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 16/180 (8%)
Query: 584 IKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD-SAYLFYEYAPKGTL 642
+K LN +I +G +F E ++ S+ NV++ L L S+ S + Y G L
Sbjct: 68 VKSLN---RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 124
Query: 643 FDVLHGCLENALDWASRYSIAVG--VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQ 700
+ + N + I G VA+G+ FL S + DL+ RN L +
Sbjct: 125 RNFIRNETHNP---TVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVK 178
Query: 701 IGDIELCKVIDPSKSTGSLSTVAGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ D L + + K S+ G+ V ++ E T + T +V+SFGV+L EL+T
Sbjct: 179 VADFGLARDMY-DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 60/157 (38%), Gaps = 8/157 (5%)
Query: 613 SNSNVMTPLAYVLASDSAYLF-YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLA 671
S +T L Y + F EYA G LF H E + L
Sbjct: 67 SRHPFLTALKYSFQTHDRLCFVMEYANGGELF--FHLSRERVFSEDRARFYGAEIVSALD 124
Query: 672 FLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPP 731
+LH + ++ DL N+ L +I D LCK + K ++ G+ Y+ P
Sbjct: 125 YLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAP 180
Query: 732 EYAYTMRVTMAGNVYSFGVILLELLTGKTA-VNQGNE 767
E A + + GV++ E++ G+ NQ +E
Sbjct: 181 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 217
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 62/147 (42%), Gaps = 10/147 (6%)
Query: 614 NSNVMTPLAYVLASDSA-YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAF 672
N + L Y ++ YL ++ G LF L + + Y + +A L
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALA--LDH 141
Query: 673 LHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCK-VIDPSKSTGSLSTVAGSVGYIPP 731
LH S I+ DL NI L ++ D L K ID K S G+V Y+ P
Sbjct: 142 LH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF---CGTVEYMAP 195
Query: 732 EYAYTMRVTMAGNVYSFGVILLELLTG 758
E T + + +SFGV++ E+LTG
Sbjct: 196 EVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 68/166 (40%), Gaps = 19/166 (11%)
Query: 606 LEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHG--------------CLE 651
++++GK + N++ L Y+ EYA KG L + L E
Sbjct: 86 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 143
Query: 652 NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711
+ + S +A+G+ +L S + DL+ RN+ + +I D L + I+
Sbjct: 144 EQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 200
Query: 712 PSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ V ++ PE + T +V+SFGV++ E+ T
Sbjct: 201 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 60/157 (38%), Gaps = 8/157 (5%)
Query: 613 SNSNVMTPLAYVLASDSAYLF-YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLA 671
S +T L Y + F EYA G LF H E + L
Sbjct: 66 SRHPFLTALKYSFQTHDRLCFVMEYANGGELF--FHLSRERVFSEDRARFYGAEIVSALD 123
Query: 672 FLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPP 731
+LH + ++ DL N+ L +I D LCK + K ++ G+ Y+ P
Sbjct: 124 YLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAP 179
Query: 732 EYAYTMRVTMAGNVYSFGVILLELLTGKTAV-NQGNE 767
E A + + GV++ E++ G+ NQ +E
Sbjct: 180 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 216
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
S + VA+G+AFL S + DL+ RNI L + +I D L + I +
Sbjct: 167 SFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 223
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
V ++ PE + T +V+S+G+ L EL +
Sbjct: 224 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
S + VA+G+AFL S + DL+ RNI L + +I D L + I +
Sbjct: 149 SFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 205
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
V ++ PE + T +V+S+G+ L EL +
Sbjct: 206 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
S + VA+G+AFL S + DL+ RNI L + +I D L + I +
Sbjct: 172 SFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 228
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
V ++ PE + T +V+S+G+ L EL +
Sbjct: 229 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 68/166 (40%), Gaps = 19/166 (11%)
Query: 606 LEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHG--------------CLE 651
++++GK + N++ L Y+ EYA KG L + L E
Sbjct: 94 MKMIGK--HKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 652 NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711
+ + S +A+G+ +L S + DL+ RN+ + +I D L + I+
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 712 PSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ V ++ PE + T +V+SFGV++ E+ T
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 16/180 (8%)
Query: 584 IKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD-SAYLFYEYAPKGTL 642
+K LN +I +G +F E ++ S+ NV++ L L S+ S + Y G L
Sbjct: 63 VKSLN---RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 119
Query: 643 FDVLHGCLENALDWASRYSIAVG--VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQ 700
+ + N + I G VA+G+ FL S + DL+ RN L +
Sbjct: 120 RNFIRNETHNP---TVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVK 173
Query: 701 IGDIELCKVIDPSKSTGSLSTVAGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ D L + + K S+ G+ V ++ E T + T +V+SFGV+L EL+T
Sbjct: 174 VADFGLARDMY-DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 62/147 (42%), Gaps = 10/147 (6%)
Query: 614 NSNVMTPLAYVLASDSA-YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAF 672
N + L Y ++ YL ++ G LF L + + Y + +A L
Sbjct: 85 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALA--LDH 142
Query: 673 LHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCK-VIDPSKSTGSLSTVAGSVGYIPP 731
LH S I+ DL NI L ++ D L K ID K S G+V Y+ P
Sbjct: 143 LH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF---CGTVEYMAP 196
Query: 732 EYAYTMRVTMAGNVYSFGVILLELLTG 758
E T + + +SFGV++ E+LTG
Sbjct: 197 EVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 76/174 (43%), Gaps = 12/174 (6%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY 660
+F KE V+ ++ + N++ L Y+ E+ G L D L C ++
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLL 119
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
+A ++ + +L + DL+ RN + ++ D L +++ TG
Sbjct: 120 YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTY 171
Query: 721 TV-AGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAK 770
T AG+ + + PE + ++ +V++FGV+L E+ T + G +L++
Sbjct: 172 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 225
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 74/182 (40%), Gaps = 15/182 (8%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVL--HGCLENALD 655
S K +E+ ++ L++ N++ + + YL EYA G +FD L HG ++
Sbjct: 56 SLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA 115
Query: 656 WASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715
A I V + H I+ DL N+ L + +I D +
Sbjct: 116 RAKFRQIVSAV----QYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFS---NEFTF 165
Query: 716 TGSLSTVAGSVGYIPPEYAYTMRVTMAG-NVYSFGVILLELLTGKTAVNQGN--ELAKWV 772
L T GS Y PE + +V+S GVIL L++G + N EL + V
Sbjct: 166 GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 225
Query: 773 LR 774
LR
Sbjct: 226 LR 227
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 81/183 (44%), Gaps = 19/183 (10%)
Query: 585 KKLNWSDKIFQLGSHHK----FDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKG 640
K+++ + K ++G K F E ++G+ + N++ V S + EY G
Sbjct: 60 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 119
Query: 641 TLFDVLHGCLENALDWASRYSIAVGVAQGLAFLH--GFTSNPILLLDLSTRNIFLKSLKE 698
+L L + + G+A G+ +L G+ DL+ RNI + S
Sbjct: 120 SLDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHR-----DLAARNILINSNLV 173
Query: 699 PQIGDIELCKVI--DPSKSTGSLSTVAGSV--GYIPPEYAYTMRVTMAGNVYSFGVILLE 754
++ D L +V+ DP + +T G + + PE + T A +V+S+G++L E
Sbjct: 174 CKVSDFGLSRVLEDDPE---AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWE 230
Query: 755 LLT 757
+++
Sbjct: 231 VMS 233
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 11/157 (7%)
Query: 605 ELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAV 664
E ++G+ + N++ V S + EY G+L L + +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK-HDAQFTVIQLVGMLR 154
Query: 665 GVAQGLAFLH--GFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
G+A G+ +L G+ DL+ RNI + S ++ D L +V++ + +T
Sbjct: 155 GIASGMKYLSDMGYVHR-----DLAARNILINSNLVCKVSDFGLARVLE-DDPEAAYTTR 208
Query: 723 AGSV--GYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
G + + PE + T A +V+S+G++L E+++
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 74/182 (40%), Gaps = 15/182 (8%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVL--HGCLENALD 655
S K +E+ ++ L++ N++ + + YL EYA G +FD L HG ++
Sbjct: 56 SLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA 115
Query: 656 WASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715
A I V + H I+ DL N+ L + +I D +
Sbjct: 116 RAKFRQIVSAV----QYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFS---NEFTF 165
Query: 716 TGSLSTVAGSVGYIPPEYAYTMRVTMAG-NVYSFGVILLELLTGKTAVNQGN--ELAKWV 772
L T GS Y PE + +V+S GVIL L++G + N EL + V
Sbjct: 166 GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 225
Query: 773 LR 774
LR
Sbjct: 226 LR 227
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 76/174 (43%), Gaps = 12/174 (6%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY 660
+F KE V+ ++ + N++ L Y+ E+ G L D L C ++
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 119
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
+A ++ + +L + DL+ RN + ++ D L +++ TG
Sbjct: 120 YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTY 171
Query: 721 TV-AGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAK 770
T AG+ + + PE + ++ +V++FGV+L E+ T + G +L++
Sbjct: 172 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 225
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 76/174 (43%), Gaps = 12/174 (6%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY 660
+F KE V+ ++ + N++ L Y+ E+ G L D L C ++
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 114
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
+A ++ + +L + DL+ RN + ++ D L +++ TG
Sbjct: 115 YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTY 166
Query: 721 TV-AGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAK 770
T AG+ + + PE + ++ +V++FGV+L E+ T + G +L++
Sbjct: 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 220
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 76/174 (43%), Gaps = 12/174 (6%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY 660
+F KE V+ ++ + N++ L Y+ E+ G L D L C ++
Sbjct: 59 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 118
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
+A ++ + +L + DL+ RN + ++ D L +++ TG
Sbjct: 119 YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTY 170
Query: 721 TV-AGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAK 770
T AG+ + + PE + ++ +V++FGV+L E+ T + G +L++
Sbjct: 171 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 224
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 76/174 (43%), Gaps = 12/174 (6%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY 660
+F KE V+ ++ + N++ L Y+ E+ G L D L C ++
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 114
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
+A ++ + +L + DL+ RN + ++ D L +++ TG
Sbjct: 115 YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTY 166
Query: 721 TV-AGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAK 770
T AG+ + + PE + ++ +V++FGV+L E+ T + G +L++
Sbjct: 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 220
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 63/159 (39%), Gaps = 16/159 (10%)
Query: 605 ELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAV 664
E+ VL +L + N+M + + YL E G LFD + L I
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEI--ILRQKFSEVDAAVIMK 111
Query: 665 GVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKST-----GSL 719
V G +LH + I+ DL N+ L+S L K++D S G +
Sbjct: 112 QVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDA-----LIKIVDFGLSAHFEVGGKM 163
Query: 720 STVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 758
G+ YI PE + +V+S GVIL LL G
Sbjct: 164 KERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 74/182 (40%), Gaps = 15/182 (8%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVL--HGCLENALD 655
S K +E+ ++ L++ N++ + + YL EYA G +FD L HG ++
Sbjct: 56 SLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA 115
Query: 656 WASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715
A I V + H I+ DL N+ L + +I D +
Sbjct: 116 RAKFRQIVSAV----QYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFS---NEFTF 165
Query: 716 TGSLSTVAGSVGYIPPEYAYTMRVTMAG-NVYSFGVILLELLTGKTAVNQGN--ELAKWV 772
L T GS Y PE + +V+S GVIL L++G + N EL + V
Sbjct: 166 GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 225
Query: 773 LR 774
LR
Sbjct: 226 LR 227
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 73/182 (40%), Gaps = 15/182 (8%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVL--HGCLENALD 655
S K +E+ ++ L++ N++ + + YL EYA G +FD L HG ++
Sbjct: 57 SLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA 116
Query: 656 WASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715
A I V + H I+ DL N+ L +I D +
Sbjct: 117 RAKFRQIVSAV----QYCH---QKYIVHRDLKAENLLLDGDMNIKIADFGFS---NEFTV 166
Query: 716 TGSLSTVAGSVGYIPPEYAYTMRVTMAG-NVYSFGVILLELLTGKTAVNQGN--ELAKWV 772
L T GS Y PE + +V+S GVIL L++G + N EL + V
Sbjct: 167 GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 226
Query: 773 LR 774
LR
Sbjct: 227 LR 228
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 35/161 (21%), Positives = 69/161 (42%), Gaps = 12/161 (7%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY 660
+F KE V+ ++ + N++ L Y+ E+ G L D L C +
Sbjct: 53 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLL 112
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
+A ++ + +L + DL+ RN + ++ D L +++ TG
Sbjct: 113 YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTX 164
Query: 721 TV-AGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
T AG+ + + PE + ++ +V++FGV+L E+ T
Sbjct: 165 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 16/180 (8%)
Query: 584 IKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD-SAYLFYEYAPKGTL 642
+K LN +I +G +F E ++ S+ NV++ L L S+ S + Y G L
Sbjct: 62 VKSLN---RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 118
Query: 643 FDVLHGCLENALDWASRYSIAVG--VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQ 700
+ + N + I G VA+G+ +L S + DL+ RN L +
Sbjct: 119 RNFIRNETHNP---TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVK 172
Query: 701 IGDIELCKVIDPSKSTGSLSTVAGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ D L + + K S+ G+ V ++ E T + T +V+SFGV+L EL+T
Sbjct: 173 VADFGLARDMY-DKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 69/161 (42%), Gaps = 12/161 (7%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY 660
+F KE V+ ++ + N++ L Y+ EY P G L D L C +
Sbjct: 74 EFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLL 133
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
+A ++ + +L + DL+ RN + ++ D L +++ TG
Sbjct: 134 YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLSRLM-----TGDTY 185
Query: 721 TV-AGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
T AG+ + + PE ++ +V++FGV+L E+ T
Sbjct: 186 TAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 16/180 (8%)
Query: 584 IKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD-SAYLFYEYAPKGTL 642
+K LN +I +G +F E ++ S+ NV++ L L S+ S + Y G L
Sbjct: 122 VKSLN---RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 178
Query: 643 FDVLHGCLENALDWASRYSIAVG--VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQ 700
+ + N + I G VA+G+ FL S + DL+ RN L +
Sbjct: 179 RNFIRNETHNP---TVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVK 232
Query: 701 IGDIELCKVIDPSKSTGSLSTVAGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ D L + + K S+ G+ V ++ E T + T +V+SFGV+L EL+T
Sbjct: 233 VADFGLARDMY-DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 62/147 (42%), Gaps = 10/147 (6%)
Query: 614 NSNVMTPLAYVLASDSA-YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAF 672
N + L Y ++ YL ++ G LF L + + Y + +A L
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALA--LDH 141
Query: 673 LHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCK-VIDPSKSTGSLSTVAGSVGYIPP 731
LH S I+ DL NI L ++ D L K ID K S G+V Y+ P
Sbjct: 142 LH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF---CGTVEYMAP 195
Query: 732 EYAYTMRVTMAGNVYSFGVILLELLTG 758
E T + + +SFGV++ E+LTG
Sbjct: 196 EVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 81/183 (44%), Gaps = 19/183 (10%)
Query: 585 KKLNWSDKIFQLGSHHK----FDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKG 640
K+++ + K ++G K F E ++G+ + N++ V S + EY G
Sbjct: 43 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 102
Query: 641 TLFDVLHGCLENALDWASRYSIAVGVAQGLAFLH--GFTSNPILLLDLSTRNIFLKSLKE 698
+L L + + G+A G+ +L G+ DL+ RNI + S
Sbjct: 103 SLDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHR-----DLAARNILINSNLV 156
Query: 699 PQIGDIELCKVI--DPSKSTGSLSTVAGSV--GYIPPEYAYTMRVTMAGNVYSFGVILLE 754
++ D L +V+ DP + +T G + + PE + T A +V+S+G++L E
Sbjct: 157 CKVSDFGLSRVLEDDPE---AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWE 213
Query: 755 LLT 757
+++
Sbjct: 214 VMS 216
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 11/157 (7%)
Query: 605 ELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAV 664
E ++G+ + N++ V S + EY G+L L + +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK-HDAQFTVIQLVGMLR 154
Query: 665 GVAQGLAFLH--GFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
G+A G+ +L G+ DL+ RNI + S ++ D L +V++ + +T
Sbjct: 155 GIASGMKYLSDMGYVHR-----DLAARNILINSNLVCKVSDFGLSRVLE-DDPEAAYTTR 208
Query: 723 AGSV--GYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
G + + PE + T A +V+S+G++L E+++
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 50/232 (21%), Positives = 97/232 (41%), Gaps = 24/232 (10%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVL--HGCLENALD 655
S +F +E + + KLS+ ++ Y+ EY G L + L HG L+
Sbjct: 46 SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHG---KGLE 102
Query: 656 WASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715
+ + V +G+AFL S+ + DL+ RN + ++ D + + + +
Sbjct: 103 PSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY 159
Query: 716 TGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLR 774
S+ T V + PE + + + +V++FG+++ E+ + GK + +
Sbjct: 160 VSSVGT-KFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYD--------LYT 210
Query: 775 NSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVL 826
NS K+ + R LA T+ ++ +C PE RP + +L
Sbjct: 211 NSEVVLKVSQ--GHRLYRPHLASD----TIYQIMYSCWHELPEKRPTFQQLL 256
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCK-VIDPSKSTGSLSTVAG 724
+A GL LH S I+ DL NI L ++ D L K ID K S G
Sbjct: 139 LALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSF---CG 192
Query: 725 SVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 758
+V Y+ PE + + + +S+GV++ E+LTG
Sbjct: 193 TVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 11/135 (8%)
Query: 623 YVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPIL 682
Y+ + + ++ Y+ AP+ D L LE+ + + VA+G+ FL S +
Sbjct: 122 YLRSKRNEFVPYKVAPEDLYKDFL--TLEHLI------CYSFQVAKGMEFL---ASRKCI 170
Query: 683 LLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMA 742
DL+ RNI L +I D L + I + ++ PE + T+
Sbjct: 171 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQ 230
Query: 743 GNVYSFGVILLELLT 757
+V+SFGV+L E+ +
Sbjct: 231 SDVWSFGVLLWEIFS 245
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 121/288 (42%), Gaps = 50/288 (17%)
Query: 7 IDGLKLLNFSKNELVSL---PTFNGFAGLEVLDFSSNNLNGNINLQFDELVXXXXXXXXX 63
+ L L+ SKN++ SL P+F L+ +DFSSN + + + L
Sbjct: 122 LKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPL---------- 171
Query: 64 XXXXGFLPINLGKTKALEELVLSGNAFHGEIP----KGIADYRNLTL--IDLSAN----N 113
+ K L L+ N+ + + K + +RN+ L +D+S N +
Sbjct: 172 ------------QGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVD 219
Query: 114 LSGSVPDRIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQNKFSGSVPGGITRF 173
++G+ + I + +++ A+++ G A + +QN F+G +
Sbjct: 220 ITGNFSNAISKSQAFSLIL--AHHIMG------AGFGFHNIKDPDQNTFAGLARSSV--- 268
Query: 174 LRNLDLSYNKLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMS--PNLVRLRLGTNLLI 231
R+LDLS+ + + + +L+ ++L+ N + + NL L L NLL
Sbjct: 269 -RHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLL- 326
Query: 232 GEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNEL 279
GE+ S+ F L K+ Y++L N + Q L L+L N L
Sbjct: 327 GELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNAL 374
Score = 29.3 bits (64), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 104/264 (39%), Gaps = 37/264 (14%)
Query: 6 GIDGLKLLNFSKNELVSLPT--FNGFAGLEVLDFSSNNLN--GNINLQFDELVXXXXXXX 61
G+D L++LN S N L L + F G + +D N++ + +F E +
Sbjct: 312 GLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRD 371
Query: 62 XXXXXXGFLP------INLGKTKALEELVLSGNAFH--------GEIPKGIADYRNLTLI 107
F+P ++ K L ++ L+ N H +I + +L ++
Sbjct: 372 NALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQIL 431
Query: 108 DLSANNLSGSVPDRI-GELSKLEVLILSANNLDGRLPTSLA-----SITTLSRFAANQNK 161
L+ N S D+ E LE L L N L T L ++ L N N
Sbjct: 432 ILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNY 491
Query: 162 FSGSVPGGITRF--LRNLDLSYNKLLGVIPIDLLSH----PNLQTIDLSVNMLEGSLPQN 215
+ PG + LR L L+ N+L +LSH NL+ +D+S N L P +
Sbjct: 492 LNSLPPGVFSHLTALRGLSLNSNRL------TVLSHNDLPANLEILDISRNQLLAPNP-D 544
Query: 216 MSPNLVRLRLGTNLLIGEIPSATF 239
+ +L L + N I E +TF
Sbjct: 545 VFVSLSVLDITHNKFICECELSTF 568
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 592 KIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVL-HGCL 650
KI + H K E+LG S S + + + +S Y+ EY + L +VL G L
Sbjct: 60 KIIRRLDHDNIVKVFEILGP-SGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVLEQGPL 117
Query: 651 ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKS----LKEPQIGDIEL 706
L+ +R + +GL ++H S +L DL N+F+ + LK IGD L
Sbjct: 118 ---LEEHARL-FMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLK---IGDFGL 167
Query: 707 CKVIDPSKS-TGSLSTVAGSVGYIPPEYAYTMR-VTMAGNVYSFGVILLELLTGKTAVNQ 764
+++DP S G LS + Y P + T A ++++ G I E+LTGKT
Sbjct: 168 ARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAG 227
Query: 765 GNELAKWVL 773
+EL + L
Sbjct: 228 AHELEQMQL 236
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 584 IKKLNWSDKIFQLGSHHKFD---KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKG 640
IKK+++S K S+ K+ KE+ L KL + N + L +A+L EY G
Sbjct: 84 IKKMSYSGK----QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LG 138
Query: 641 TLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQ 700
+ D+L + L ++ G QGLA+LH S+ ++ D+ NI L +
Sbjct: 139 SASDLLE-VHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVK 194
Query: 701 IGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTM---RVTMAGNVYSFGVILLELLT 757
+GD ++ P+ + G+ ++ PE M + +V+S G+ +EL
Sbjct: 195 LGDFGSASIMAPA------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 248
Query: 758 GK 759
K
Sbjct: 249 RK 250
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 11/157 (7%)
Query: 605 ELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAV 664
E ++G+ + N++ V S + EY G+L L + +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK-HDAQFTVIQLVGMLR 154
Query: 665 GVAQGLAFLH--GFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
G+A G+ +L G+ DL+ RNI + S ++ D L +V++ + +T
Sbjct: 155 GIASGMKYLSDMGYVHR-----DLAARNILINSNLVCKVSDFGLSRVLE-DDPEAAYTTR 208
Query: 723 AGSV--GYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
G + + PE + T A +V+S+G++L E+++
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 11/157 (7%)
Query: 605 ELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAV 664
E ++G+ + N++ V S + EY G+L L + +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK-HDAQFTVIQLVGMLR 154
Query: 665 GVAQGLAFLH--GFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
G+A G+ +L G+ DL+ RNI + S ++ D L +V++ + +T
Sbjct: 155 GIASGMKYLSDMGYVHR-----DLAARNILINSNLVCKVSDFGLSRVLE-DDPEAAYTTR 208
Query: 723 AGSV--GYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
G + + PE + T A +V+S+G++L E+++
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 5/157 (3%)
Query: 602 FDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYS 661
F E ++G+ S+ N++ + + EY G L L +
Sbjct: 93 FLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLRE-KDGEFSVLQLVG 151
Query: 662 IAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVI-DPSKSTGSLS 720
+ G+A G+ +L + DL+ RNI + S ++ D L +V+ D ++T + S
Sbjct: 152 MLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTS 208
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + PE + T A +V+SFG+++ E++T
Sbjct: 209 GGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 46/182 (25%), Positives = 84/182 (46%), Gaps = 24/182 (13%)
Query: 584 IKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAY--LFYEYAPKGT 641
+K +WS + F++E L S+ NV+ L + + + L + P G+
Sbjct: 41 LKVRDWSTR-----KSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGS 95
Query: 642 LFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLD-LSTRNIFLKSLKEPQ 700
L++VLH +D + A+ +A+G+AFLH T P++ L++R++ + E
Sbjct: 96 LYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH--TLEPLIPRHALNSRSVM---IDEDM 150
Query: 701 IGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAY-----TMRVTMAGNVYSFGVILLEL 755
I + V +S G + A ++ PE T R + +++SF V+L EL
Sbjct: 151 TARISMADVKFSFQSPGRMYAPA----WVAPEALQKKPEDTNR--RSADMWSFAVLLWEL 204
Query: 756 LT 757
+T
Sbjct: 205 VT 206
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 11/157 (7%)
Query: 605 ELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAV 664
E ++G+ + N++ V S + EY G+L L + +
Sbjct: 94 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK-HDAQFTVIQLVGMLR 152
Query: 665 GVAQGLAFLH--GFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
G+A G+ +L G+ DL+ RNI + S ++ D L +V++ + +T
Sbjct: 153 GIASGMKYLSDMGYVHR-----DLAARNILINSNLVCKVSDFGLSRVLE-DDPEAAYTTR 206
Query: 723 AGSV--GYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
G + + PE + T A +V+S+G++L E+++
Sbjct: 207 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 7/159 (4%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY 660
K E+ + L++ +V+ + +D ++ E + +L + LH + + +RY
Sbjct: 61 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARY 119
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
+ + G +LH N ++ DL N+FL E +IGD L ++ +
Sbjct: 120 YLR-QIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV- 174
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGK 759
+ G+ YI PE + +V+S G I+ LL GK
Sbjct: 175 -LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 212
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 3/134 (2%)
Query: 193 LSHPNLQTIDLSVNMLEGSLPQNMSPNLVRLRLGTNLLIGEIPS-ATFTSLEKLTYLELD 251
+ H T+D + L+ +P+++ + L L N L G I S F L L LEL
Sbjct: 5 MCHCEGTTVDCTGRGLK-EIPRDIPLHTTELLLNDNEL-GRISSDGLFGRLPHLVKLELK 62
Query: 252 NNSFTGMIPQQLGSCRSLTLLNLAQNELNGSLPIQLGSLGILQVMNLQLNKLSGEIPSQF 311
N TG+ P + L L +N++ L L+ +NL N++S +P F
Sbjct: 63 RNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSF 122
Query: 312 SQLKLLSTMNISWN 325
L L+++N++ N
Sbjct: 123 EHLNSLTSLNLASN 136
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 196 PNLQTIDLSVNMLEGSLPQNM--SPNLVRLRLGTNLLIGEIPSATFTSLEKLTYLELDNN 253
P+L ++L N L G P + ++ L+LG N I EI + F L +L L L +N
Sbjct: 54 PHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK-IKEISNKMFLGLHQLKTLNLYDN 112
Query: 254 SFTGMIPQQLGSCRSLTLLNLAQNELN 280
+ ++P SLT LNLA N N
Sbjct: 113 QISCVMPGSFEHLNSLTSLNLASNPFN 139
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 353 GSIPNSITNMRSLIELQLGGNQLSGTIPMMPPRLQ--IALNLSSNLFEGPIPTTFARLNG 410
G PN+ + ELQLG N++ M L LNL N +P +F LN
Sbjct: 68 GIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNS 127
Query: 411 LEVLDLSNNRFS 422
L L+L++N F+
Sbjct: 128 LTSLNLASNPFN 139
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 7/159 (4%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY 660
K E+ + L++ +V+ + +D ++ E + +L + LH + + +RY
Sbjct: 85 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARY 143
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
+ + G +LH N ++ DL N+FL E +IGD L ++ +
Sbjct: 144 YLR-QIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV- 198
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGK 759
+ G+ YI PE + +V+S G I+ LL GK
Sbjct: 199 -LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 236
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 11/157 (7%)
Query: 605 ELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAV 664
E ++G+ + N++ V S + EY G+L L + +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK-HDAQFTVIQLVGMLR 154
Query: 665 GVAQGLAFLH--GFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
G+A G+ +L G+ DL+ RNI + S ++ D L +V++ + +T
Sbjct: 155 GIASGMKYLSDMGYVHR-----DLAARNILINSNLVCKVSDFGLSRVLE-DDPEAAYTTR 208
Query: 723 AGSV--GYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
G + + PE + T A +V+S+G++L E+++
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 58/152 (38%), Gaps = 9/152 (5%)
Query: 618 MTPLAYVLASDSAYLF-YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGF 676
+T L Y + F EYA G LF H E + L +LH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARFYGAEIVSALEYLH-- 122
Query: 677 TSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYT 736
S ++ D+ N+ L +I D LCK + ++ G+ Y+ PE
Sbjct: 123 -SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLED 179
Query: 737 MRVTMAGNVYSFGVILLELLTGKTAV-NQGNE 767
A + + GV++ E++ G+ NQ +E
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 11/135 (8%)
Query: 623 YVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPIL 682
Y+ + + ++ Y+ AP+ D L LE+ + + VA+G+ FL S +
Sbjct: 122 YLRSKRNEFVPYKVAPEDLYKDFL--TLEHLI------CYSFQVAKGMEFL---ASRKCI 170
Query: 683 LLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMA 742
DL+ RNI L +I D L + I + ++ PE + T+
Sbjct: 171 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 230
Query: 743 GNVYSFGVILLELLT 757
+V+SFGV+L E+ +
Sbjct: 231 SDVWSFGVLLWEIFS 245
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 11/135 (8%)
Query: 623 YVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPIL 682
Y+ + + ++ Y+ AP+ D L LE+ + + VA+G+ FL S +
Sbjct: 113 YLRSKRNEFVPYKVAPEDLYKDFL--TLEHLI------CYSFQVAKGMEFL---ASRKCI 161
Query: 683 LLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMA 742
DL+ RNI L +I D L + I + ++ PE + T+
Sbjct: 162 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 221
Query: 743 GNVYSFGVILLELLT 757
+V+SFGV+L E+ +
Sbjct: 222 SDVWSFGVLLWEIFS 236
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 11/135 (8%)
Query: 623 YVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPIL 682
Y+ + + ++ Y+ AP+ D L LE+ + + VA+G+ FL S +
Sbjct: 113 YLRSKRNEFVPYKVAPEDLYKDFL--TLEHLI------CYSFQVAKGMEFL---ASRKCI 161
Query: 683 LLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMA 742
DL+ RNI L +I D L + I + ++ PE + T+
Sbjct: 162 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 221
Query: 743 GNVYSFGVILLELLT 757
+V+SFGV+L E+ +
Sbjct: 222 SDVWSFGVLLWEIFS 236
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 58/152 (38%), Gaps = 9/152 (5%)
Query: 618 MTPLAYVLASDSAYLF-YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGF 676
+T L Y + F EYA G LF H E + L +LH
Sbjct: 72 LTALKYAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARFYGAEIVSALEYLH-- 127
Query: 677 TSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYT 736
S ++ D+ N+ L +I D LCK + ++ G+ Y+ PE
Sbjct: 128 -SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLED 184
Query: 737 MRVTMAGNVYSFGVILLELLTGKTAV-NQGNE 767
A + + GV++ E++ G+ NQ +E
Sbjct: 185 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 216
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 69/159 (43%), Gaps = 7/159 (4%)
Query: 602 FDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYS 661
F E ++G+ + NV+ V S + E+ G+L L +
Sbjct: 81 FLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQN-DGQFTVIQLVG 139
Query: 662 IAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLST 721
+ G+A G+ +L + DL+ RNI + S ++ D L + ++ S + ++
Sbjct: 140 MLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTS 196
Query: 722 VAGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
G + + PE + T A +V+S+G+++ E+++
Sbjct: 197 ALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 58/152 (38%), Gaps = 9/152 (5%)
Query: 618 MTPLAYVLASDSAYLF-YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGF 676
+T L Y + F EYA G LF H E + L +LH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARFYGAEIVSALEYLH-- 122
Query: 677 TSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYT 736
S ++ D+ N+ L +I D LCK + ++ G+ Y+ PE
Sbjct: 123 -SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLED 179
Query: 737 MRVTMAGNVYSFGVILLELLTGKTAV-NQGNE 767
A + + GV++ E++ G+ NQ +E
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 18/164 (10%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY 660
+F KE V+ ++ + N++ L Y+ E+ G L D L C ++
Sbjct: 56 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLL 115
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS---TG 717
+A ++ + +L + DL+ RN +G+ L KV D S TG
Sbjct: 116 YMATQISSAMEYLE---KKNFIHRDLAARNCL--------VGENHLVKVADFGLSRLMTG 164
Query: 718 SLSTV-AGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
T AG+ + + PE + ++ +V++FGV+L E+ T
Sbjct: 165 DTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 7/159 (4%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY 660
K E+ + L++ +V+ + +D ++ E + +L + LH + + +RY
Sbjct: 87 KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARY 145
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
+ + G +LH N ++ DL N+FL E +IGD L ++ +
Sbjct: 146 YLR-QIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV- 200
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGK 759
+ G+ YI PE + +V+S G I+ LL GK
Sbjct: 201 -LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 238
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 58/152 (38%), Gaps = 9/152 (5%)
Query: 618 MTPLAYVLASDSAYLF-YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGF 676
+T L Y + F EYA G LF H E + L +LH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARFYGAEIVSALEYLH-- 122
Query: 677 TSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYT 736
S ++ D+ N+ L +I D LCK + ++ G+ Y+ PE
Sbjct: 123 -SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLED 179
Query: 737 MRVTMAGNVYSFGVILLELLTGKTAV-NQGNE 767
A + + GV++ E++ G+ NQ +E
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 11/135 (8%)
Query: 623 YVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPIL 682
Y+ + + ++ Y+ AP+ D L LE+ + + VA+G+ FL S +
Sbjct: 159 YLRSKRNEFVPYKVAPEDLYKDFL--TLEHLI------CYSFQVAKGMEFL---ASRKCI 207
Query: 683 LLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMA 742
DL+ RNI L +I D L + I + ++ PE + T+
Sbjct: 208 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 267
Query: 743 GNVYSFGVILLELLT 757
+V+SFGV+L E+ +
Sbjct: 268 SDVWSFGVLLWEIFS 282
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 11/157 (7%)
Query: 605 ELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAV 664
E ++G+ + N++ V S + EY G+L L + +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK-HDAQFTVIQLVGMLR 154
Query: 665 GVAQGLAFLH--GFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
G+A G+ +L G+ DL+ RNI + S ++ D L +V++ + +T
Sbjct: 155 GIASGMKYLSDMGYVHR-----DLAARNILINSNLVCKVSDFGLGRVLE-DDPEAAYTTR 208
Query: 723 AGSV--GYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
G + + PE + T A +V+S+G++L E+++
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/235 (19%), Positives = 90/235 (38%), Gaps = 20/235 (8%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S +F +E +V+ LS+ ++ ++ EY G L + L + +
Sbjct: 62 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE-MRHRFQTQ 120
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG 717
+ V + + +L S L DL+ RN + ++ D L + + + T
Sbjct: 121 QLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETS 177
Query: 718 SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSA 777
S+ + V + PPE + + ++++FGV++ E+ + L K
Sbjct: 178 SVGS-KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS----------LGKMPYERFT 226
Query: 778 QQDKLDHILD-FNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831
+ +HI + R LA V + +C + RP K +L +L+
Sbjct: 227 NSETAEHIAQGLRLYRPHLASEK----VYTIMYSCWHEKADERPTFKILLSNILD 277
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 584 IKKLNWSDKIFQLGSHHKFD---KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKG 640
IKK+++S K S+ K+ KE+ L KL + N + L +A+L EY G
Sbjct: 45 IKKMSYSGK----QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LG 99
Query: 641 TLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQ 700
+ D+L + L ++ G QGLA+LH S+ ++ D+ NI L +
Sbjct: 100 SASDLLE-VHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVK 155
Query: 701 IGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTM---RVTMAGNVYSFGVILLELLT 757
+GD ++ P+ + G+ ++ PE M + +V+S G+ +EL
Sbjct: 156 LGDFGSASIMAPA------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 209
Query: 758 GK 759
K
Sbjct: 210 RK 211
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 3/107 (2%)
Query: 651 ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVI 710
E AL S A ++QG+ +L + ++ DL+ RNI + ++ +I D L + +
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 711 DPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
S S V ++ E + T +V+SFGV+L E++T
Sbjct: 201 YEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 11/135 (8%)
Query: 623 YVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPIL 682
Y+ + + ++ Y+ AP+ D L LE+ + + VA+G+ FL S +
Sbjct: 124 YLRSKRNEFVPYKEAPEDLYKDFL--TLEHLI------CYSFQVAKGMEFL---ASRKCI 172
Query: 683 LLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMA 742
DL+ RNI L +I D L + I + ++ PE + T+
Sbjct: 173 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 232
Query: 743 GNVYSFGVILLELLT 757
+V+SFGV+L E+ +
Sbjct: 233 SDVWSFGVLLWEIFS 247
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Query: 651 ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVI 710
E AL S A ++QG+ +L ++ DL+ RNI + ++ +I D L + +
Sbjct: 144 ERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 711 DPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
S S V ++ E + T +V+SFGV+L E++T
Sbjct: 201 YEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 16/180 (8%)
Query: 584 IKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD-SAYLFYEYAPKGTL 642
+K LN +I +G +F E ++ S+ NV++ L L S+ S + Y G L
Sbjct: 81 VKSLN---RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 137
Query: 643 FDVLHGCLENALDWASRYSIAVG--VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQ 700
+ + N + I G VA+G+ +L S + DL+ RN L +
Sbjct: 138 RNFIRNETHNP---TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVK 191
Query: 701 IGDIELCKVIDPSKSTGSLSTVAGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ D L + + K S+ G+ V ++ E T + T +V+SFGV+L EL+T
Sbjct: 192 VADFGLARDMY-DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 5/105 (4%)
Query: 663 AVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
A +A GL FL S I+ DL N+ L S +I D +CK + +
Sbjct: 127 AAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXF 181
Query: 723 AGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNE 767
G+ YI PE + + ++FGV+L E+L G+ +E
Sbjct: 182 CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE 226
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 6/167 (3%)
Query: 599 HHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWAS 658
KF +E + + + +++ L V+ + ++ E G L L + +LD AS
Sbjct: 55 REKFLQEALTMRQFDHPHIVK-LIGVITENPVWIIMELCTLGELRSFLQ-VRKFSLDLAS 112
Query: 659 RYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGS 718
A ++ LA+L S + D++ RN+ + S ++GD L + ++ S +
Sbjct: 113 LILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKA 169
Query: 719 LSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQG 765
S + ++ PE R T A +V+ FGV + E+L QG
Sbjct: 170 -SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 215
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 18/164 (10%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY 660
+F KE V+ ++ + N++ L Y+ E+ G L D L C ++
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 119
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS---TG 717
+A ++ + +L + DL+ RN +G+ L KV D S TG
Sbjct: 120 YMATQISSAMEYLE---KKNFIHRDLAARNCL--------VGENHLVKVADFGLSRLMTG 168
Query: 718 SLSTV-AGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
T AG+ + + PE + ++ +V++FGV+L E+ T
Sbjct: 169 DTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 9/107 (8%)
Query: 663 AVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCK--VIDPSKSTGSLS 720
A +A GL FL S I+ DL N+ L S +I D +CK + D +
Sbjct: 448 AAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV----TTK 500
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNE 767
G+ YI PE + + ++FGV+L E+L G+ +E
Sbjct: 501 XFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE 547
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 18/164 (10%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY 660
+F KE V+ ++ + N++ L Y+ E+ G L D L C ++
Sbjct: 68 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 127
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS---TG 717
+A ++ + +L + DL+ RN +G+ L KV D S TG
Sbjct: 128 YMATQISSAMEYLE---KKNFIHRDLAARNCL--------VGENHLVKVADFGLSRLMTG 176
Query: 718 SLSTV-AGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
T AG+ + + PE + ++ +V++FGV+L E+ T
Sbjct: 177 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 18/165 (10%)
Query: 600 HKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASR 659
+F KE V+ ++ + N++ L Y+ E+ G L D L C +
Sbjct: 52 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 111
Query: 660 YSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS---T 716
+A ++ + +L + DL+ RN +G+ L KV D S T
Sbjct: 112 LYMATQISSAMEYLE---KKNFIHRDLAARNCL--------VGENHLVKVADFGLSRLMT 160
Query: 717 GSLSTV-AGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
G T AG+ + + PE + ++ +V++FGV+L E+ T
Sbjct: 161 GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
VA+G+ FL S + DL+ RNI L +I D L + I
Sbjct: 157 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 726 VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ ++ PE + T+ +V+SFGV+L E+ +
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 16/180 (8%)
Query: 584 IKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD-SAYLFYEYAPKGTL 642
+K LN +I +G +F E ++ S+ NV++ L L S+ S + Y G L
Sbjct: 82 VKSLN---RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 138
Query: 643 FDVLHGCLENALDWASRYSIAVG--VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQ 700
+ + N + I G VA+G+ +L S + DL+ RN L +
Sbjct: 139 RNFIRNETHNP---TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVK 192
Query: 701 IGDIELCKVIDPSKSTGSLSTVAGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ D L + + K S+ G+ V ++ E T + T +V+SFGV+L EL+T
Sbjct: 193 VADFGLARDMY-DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/171 (19%), Positives = 75/171 (43%), Gaps = 17/171 (9%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVL-----HG------- 648
+F E + +L + NV+ L V + + Y G L + L H
Sbjct: 75 EFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDD 134
Query: 649 --CLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIEL 706
+++AL+ + +A G+ +L +S+ ++ DL+TRN+ + +I D+ L
Sbjct: 135 DRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGL 191
Query: 707 CKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + + L + ++ PE + ++ +++S+GV+L E+ +
Sbjct: 192 FREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 63/159 (39%), Gaps = 16/159 (10%)
Query: 605 ELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAV 664
E+ VL +L + N+M + + YL E G LFD + L I
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEI--ILRQKFSEVDAAVIMK 128
Query: 665 GVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKST-----GSL 719
V G +LH + I+ DL N+ L+S L K++D S G +
Sbjct: 129 QVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDA-----LIKIVDFGLSAHFEVGGKM 180
Query: 720 STVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 758
G+ YI PE + +V+S GVIL LL G
Sbjct: 181 KERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|2FT3|A Chain A, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|B Chain B, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|C Chain C, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|D Chain D, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|E Chain E, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|F Chain F, Crystal Structure Of The Biglycan Dimer Core Protein
Length = 332
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 103/245 (42%), Gaps = 25/245 (10%)
Query: 94 IPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLDGRLPTSLASITTLS 153
+PK I+ + TL+DL N++S D L L L+L N + + + + L
Sbjct: 48 VPKEISP--DTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQ 105
Query: 154 RFAANQNKFSGSVPGGITRFLRNLDLSYNKLLGVIPIDLLSH-PNLQTIDLSVNMLEGSL 212
+ ++N +P + L L + N++ V P + S N+ I++ N LE S
Sbjct: 106 KLYISKNHLV-EIPPNLPSSLVELRIHDNRIRKV-PKGVFSGLRNMNCIEMGGNPLENS- 162
Query: 213 PQNMSPNLVRLRLGTNLLIGEIPSATFTSL-----EKLTYLELDNNSFTGMIPQQLGSCR 267
P G L I A T + E L L LD+N + + L
Sbjct: 163 --GFEPGAFD---GLKLNYLRISEAKLTGIPKDLPETLNELHLDHNKIQAIELEDLLRYS 217
Query: 268 SLTLLNLAQNEL----NGSLPIQLGSLGILQVMNLQLNKLSGEIPSQFSQLKLLSTMNIS 323
L L L N++ NGSL L L+ ++L NKLS +P+ LKLL + +
Sbjct: 218 KLYRLGLGHNQIRMIENGSLSF----LPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLH 272
Query: 324 WNSLS 328
N+++
Sbjct: 273 TNNIT 277
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 87/197 (44%), Gaps = 17/197 (8%)
Query: 568 FSTYYKAV-MPSGMSYFIKKLNWSDKIFQLGSHHKFDKEL----EVLGKLSNSNVMTPLA 622
F T YK + +P G K+ + K + + K +KE+ V+ + N +V L
Sbjct: 28 FGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 84
Query: 623 YVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY--SIAVGVAQGLAFLHGFTSNP 680
L S + L + P G L D + +N S+Y + V +A+G+ +L
Sbjct: 85 ICLTS-TVQLIMQLMPFGCLLDYVREHKDNI---GSQYLLNWCVQIAKGMNYLE---DRR 137
Query: 681 ILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVT 740
++ DL+ RN+ +K+ + +I D L K++ + + ++ E T
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 197
Query: 741 MAGNVYSFGVILLELLT 757
+V+S+GV + EL+T
Sbjct: 198 HQSDVWSYGVTVWELMT 214
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 88/197 (44%), Gaps = 17/197 (8%)
Query: 568 FSTYYKAV-MPSGMSYFIKKLNWSDKIFQLGSHHKFDKEL----EVLGKLSNSNVMTPLA 622
F T YK + +P G K+ + K + + K +KE+ V+ + N +V L
Sbjct: 35 FGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 91
Query: 623 YVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY--SIAVGVAQGLAFLHGFTSNP 680
L S + L + P G L D + E+ + S+Y + V +A+G+ +L
Sbjct: 92 ICLTS-TVQLIMQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKGMNYLE---DRR 144
Query: 681 ILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVT 740
++ DL+ RN+ +K+ + +I D L K++ + + ++ E T
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 204
Query: 741 MAGNVYSFGVILLELLT 757
+V+S+GV + EL+T
Sbjct: 205 HQSDVWSYGVTVWELMT 221
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 87/197 (44%), Gaps = 17/197 (8%)
Query: 568 FSTYYKAV-MPSGMSYFIKKLNWSDKIFQLGSHHKFDKEL----EVLGKLSNSNVMTPLA 622
F T YK + +P G K+ + K + + K +KE+ V+ + N +V L
Sbjct: 32 FGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 88
Query: 623 YVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY--SIAVGVAQGLAFLHGFTSNP 680
L S + L + P G L D + +N S+Y + V +A+G+ +L
Sbjct: 89 ICLTS-TVQLIMQLMPFGCLLDYVREHKDNI---GSQYLLNWCVQIAKGMNYLE---DRR 141
Query: 681 ILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVT 740
++ DL+ RN+ +K+ + +I D L K++ + + ++ E T
Sbjct: 142 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 201
Query: 741 MAGNVYSFGVILLELLT 757
+V+S+GV + EL+T
Sbjct: 202 HQSDVWSYGVTVWELMT 218
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 87/197 (44%), Gaps = 17/197 (8%)
Query: 568 FSTYYKAV-MPSGMSYFIKKLNWSDKIFQLGSHHKFDKEL----EVLGKLSNSNVMTPLA 622
F T YK + +P G K+ + K + + K +KE+ V+ + N +V L
Sbjct: 29 FGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 85
Query: 623 YVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY--SIAVGVAQGLAFLHGFTSNP 680
L S + L + P G L D + +N S+Y + V +A+G+ +L
Sbjct: 86 ICLTS-TVQLIMQLMPFGCLLDYVREHKDNI---GSQYLLNWCVQIAKGMNYLE---DRR 138
Query: 681 ILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVT 740
++ DL+ RN+ +K+ + +I D L K++ + + ++ E T
Sbjct: 139 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 198
Query: 741 MAGNVYSFGVILLELLT 757
+V+S+GV + EL+T
Sbjct: 199 HQSDVWSYGVTVWELMT 215
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 88/197 (44%), Gaps = 17/197 (8%)
Query: 568 FSTYYKAV-MPSGMSYFIKKLNWSDKIFQLGSHHKFDKEL----EVLGKLSNSNVMTPLA 622
F T YK + +P G K+ + K + + K +KE+ V+ + N +V L
Sbjct: 30 FGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 86
Query: 623 YVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY--SIAVGVAQGLAFLHGFTSNP 680
L S + L + P G L D + E+ + S+Y + V +A+G+ +L
Sbjct: 87 ICLTS-TVQLIMQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKGMNYLE---DRR 139
Query: 681 ILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVT 740
++ DL+ RN+ +K+ + +I D L K++ + + ++ E T
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 199
Query: 741 MAGNVYSFGVILLELLT 757
+V+S+GV + EL+T
Sbjct: 200 HQSDVWSYGVTVWELMT 216
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 16/180 (8%)
Query: 584 IKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD-SAYLFYEYAPKGTL 642
+K LN +I +G +F E ++ S+ NV++ L L S+ S + Y G L
Sbjct: 63 VKSLN---RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 119
Query: 643 FDVLHGCLENALDWASRYSIAVG--VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQ 700
+ + N + I G VA+G+ +L S + DL+ RN L +
Sbjct: 120 RNFIRNETHNP---TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVK 173
Query: 701 IGDIELCKVIDPSKSTGSLSTVAGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ D L + + K S+ G+ V ++ E T + T +V+SFGV+L EL+T
Sbjct: 174 VADFGLARDMY-DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 14/171 (8%)
Query: 599 HHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWAS 658
KF +E + + + +++ L V+ + ++ E G L L + +LD AS
Sbjct: 60 REKFLQEALTMRQFDHPHIVK-LIGVITENPVWIIMELCTLGELRSFLQ-VRKYSLDLAS 117
Query: 659 RYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS----K 714
A ++ LA+L S + D++ RN+ + S ++GD L + ++ S
Sbjct: 118 LILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 174
Query: 715 STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQG 765
S G L + ++ PE R T A +V+ FGV + E+L QG
Sbjct: 175 SKGKLP-----IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 220
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 14/171 (8%)
Query: 599 HHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWAS 658
KF +E + + + +++ L V+ + ++ E G L L + +LD AS
Sbjct: 55 REKFLQEALTMRQFDHPHIVK-LIGVITENPVWIIMELCTLGELRSFLQ-VRKYSLDLAS 112
Query: 659 RYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS----K 714
A ++ LA+L S + D++ RN+ + S ++GD L + ++ S
Sbjct: 113 LILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 169
Query: 715 STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQG 765
S G L + ++ PE R T A +V+ FGV + E+L QG
Sbjct: 170 SKGKLP-----IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 215
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 70/165 (42%), Gaps = 18/165 (10%)
Query: 600 HKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASR 659
+F KE V+ ++ + N++ L Y+ E+ G L D L C ++
Sbjct: 55 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 114
Query: 660 YSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS---T 716
+A ++ + +L + DL+ RN +G+ L KV D S T
Sbjct: 115 LYMATQISSAMEYLE---KKNFIHRDLAARNCL--------VGENHLVKVADFGLSRLMT 163
Query: 717 GSLSTV-AGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
G T AG+ + + PE + ++ +V++FGV+L E+ T
Sbjct: 164 GDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 88/197 (44%), Gaps = 17/197 (8%)
Query: 568 FSTYYKAV-MPSGMSYFIKKLNWSDKIFQLGSHHKFDKEL----EVLGKLSNSNVMTPLA 622
F T YK + +P G K+ + K + + K +KE+ V+ + N +V L
Sbjct: 31 FGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 87
Query: 623 YVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY--SIAVGVAQGLAFLHGFTSNP 680
L S + L + P G L D + E+ + S+Y + V +A+G+ +L
Sbjct: 88 ICLTS-TVQLIMQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKGMNYLE---DRR 140
Query: 681 ILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVT 740
++ DL+ RN+ +K+ + +I D L K++ + + ++ E T
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 200
Query: 741 MAGNVYSFGVILLELLT 757
+V+S+GV + EL+T
Sbjct: 201 HQSDVWSYGVTVWELMT 217
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 18/164 (10%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY 660
+F KE V+ ++ + N++ L Y+ E+ G L D L C ++
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 119
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS---TG 717
+A ++ + +L + DL+ RN +G+ L KV D S TG
Sbjct: 120 YMATQISSAMEYLE---KKNFIHRDLAARNCL--------VGENHLVKVADFGLSRLMTG 168
Query: 718 SLSTV-AGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
T AG+ + + PE + ++ +V++FGV+L E+ T
Sbjct: 169 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 14/171 (8%)
Query: 599 HHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWAS 658
KF +E + + + +++ L V+ + ++ E G L L + +LD AS
Sbjct: 58 REKFLQEALTMRQFDHPHIVK-LIGVITENPVWIIMELCTLGELRSFLQ-VRKYSLDLAS 115
Query: 659 RYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS----K 714
A ++ LA+L S + D++ RN+ + S ++GD L + ++ S
Sbjct: 116 LILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 172
Query: 715 STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQG 765
S G L + ++ PE R T A +V+ FGV + E+L QG
Sbjct: 173 SKGKLP-----IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 218
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 14/171 (8%)
Query: 599 HHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWAS 658
KF +E + + + +++ L V+ + ++ E G L L + +LD AS
Sbjct: 55 REKFLQEALTMRQFDHPHIVK-LIGVITENPVWIIMELCTLGELRSFLQ-VRKYSLDLAS 112
Query: 659 RYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS----K 714
A ++ LA+L S + D++ RN+ + S ++GD L + ++ S
Sbjct: 113 LILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 169
Query: 715 STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQG 765
S G L + ++ PE R T A +V+ FGV + E+L QG
Sbjct: 170 SKGKLP-----IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 215
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Query: 651 ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVI 710
E AL S A ++QG+ +L ++ DL+ RNI + ++ +I D L + +
Sbjct: 144 ERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 711 DPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
S S V ++ E + T +V+SFGV+L E++T
Sbjct: 201 YEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 88/197 (44%), Gaps = 17/197 (8%)
Query: 568 FSTYYKAV-MPSGMSYFIKKLNWSDKIFQLGSHHKFDKEL----EVLGKLSNSNVMTPLA 622
F T YK + +P G K+ + K + + K +KE+ V+ + N +V L
Sbjct: 28 FGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 84
Query: 623 YVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY--SIAVGVAQGLAFLHGFTSNP 680
L S + L + P G L D + E+ + S+Y + V +A+G+ +L
Sbjct: 85 ICLTS-TVQLITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKGMNYLE---DRR 137
Query: 681 ILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVT 740
++ DL+ RN+ +K+ + +I D L K++ + + ++ E T
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 197
Query: 741 MAGNVYSFGVILLELLT 757
+V+S+GV + EL+T
Sbjct: 198 HQSDVWSYGVTVWELMT 214
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 16/180 (8%)
Query: 584 IKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD-SAYLFYEYAPKGTL 642
+K LN +I +G +F E ++ S+ NV++ L L S+ S + Y G L
Sbjct: 55 VKSLN---RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 111
Query: 643 FDVLHGCLENALDWASRYSIAVG--VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQ 700
+ + N + I G VA+G+ +L S + DL+ RN L +
Sbjct: 112 RNFIRNETHNP---TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVK 165
Query: 701 IGDIELCKVIDPSKSTGSLSTVAGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ D L + + K S+ G+ V ++ E T + T +V+SFGV+L EL+T
Sbjct: 166 VADFGLARDMY-DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 14/171 (8%)
Query: 599 HHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWAS 658
KF +E + + + +++ L V+ + ++ E G L L + +LD AS
Sbjct: 83 REKFLQEALTMRQFDHPHIVK-LIGVITENPVWIIMELCTLGELRSFLQ-VRKYSLDLAS 140
Query: 659 RYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS----K 714
A ++ LA+L S + D++ RN+ + S ++GD L + ++ S
Sbjct: 141 LILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 197
Query: 715 STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQG 765
S G L + ++ PE R T A +V+ FGV + E+L QG
Sbjct: 198 SKGKLP-----IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 243
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 9/155 (5%)
Query: 605 ELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY--SI 662
E V+ + N +V L L S + L + P G L D + +N S+Y +
Sbjct: 77 EAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNI---GSQYLLNW 132
Query: 663 AVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
V +A+G+ +L ++ DL+ RN+ +K+ + +I D L K++ +
Sbjct: 133 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 189
Query: 723 AGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ ++ E T +V+S+GV + EL+T
Sbjct: 190 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 18/164 (10%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY 660
+F KE V+ ++ + N++ L Y+ E+ G L D L C ++
Sbjct: 57 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 116
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS---TG 717
+A ++ + +L + DL+ RN +G+ L KV D S TG
Sbjct: 117 YMATQISSAMEYLE---KKNFIHRDLAARNCL--------VGENHLVKVADFGLSRLMTG 165
Query: 718 SLSTV-AGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
T AG+ + + PE + ++ +V++FGV+L E+ T
Sbjct: 166 DTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 88/197 (44%), Gaps = 17/197 (8%)
Query: 568 FSTYYKAV-MPSGMSYFIKKLNWSDKIFQLGSHHKFDKEL----EVLGKLSNSNVMTPLA 622
F T YK + +P G K+ + K + + K +KE+ V+ + N +V L
Sbjct: 31 FGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 87
Query: 623 YVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY--SIAVGVAQGLAFLHGFTSNP 680
L S + L + P G L D + E+ + S+Y + V +A+G+ +L
Sbjct: 88 ICLTS-TVQLITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKGMNYLE---DRR 140
Query: 681 ILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVT 740
++ DL+ RN+ +K+ + +I D L K++ + + ++ E T
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 200
Query: 741 MAGNVYSFGVILLELLT 757
+V+S+GV + EL+T
Sbjct: 201 HQSDVWSYGVTVWELMT 217
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 18/164 (10%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY 660
+F KE V+ ++ + N++ L Y+ E+ G L D L C ++
Sbjct: 57 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 116
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS---TG 717
+A ++ + +L + DL+ RN +G+ L KV D S TG
Sbjct: 117 YMATQISSAMEYLE---KKNFIHRDLAARNCL--------VGENHLVKVADFGLSRLMTG 165
Query: 718 SLSTV-AGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
T AG+ + + PE + ++ +V++FGV+L E+ T
Sbjct: 166 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 14/171 (8%)
Query: 599 HHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWAS 658
KF +E + + + +++ L V+ + ++ E G L L + +LD AS
Sbjct: 57 REKFLQEALTMRQFDHPHIVK-LIGVITENPVWIIMELCTLGELRSFLQ-VRKYSLDLAS 114
Query: 659 RYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS----K 714
A ++ LA+L S + D++ RN+ + S ++GD L + ++ S
Sbjct: 115 LILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 171
Query: 715 STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQG 765
S G L + ++ PE R T A +V+ FGV + E+L QG
Sbjct: 172 SKGKLP-----IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 217
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 87/197 (44%), Gaps = 17/197 (8%)
Query: 568 FSTYYKAV-MPSGMSYFIKKLNWSDKIFQLGSHHKFDKEL----EVLGKLSNSNVMTPLA 622
F T YK + +P G K+ + K + + K +KE+ V+ + N +V L
Sbjct: 29 FGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 85
Query: 623 YVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY--SIAVGVAQGLAFLHGFTSNP 680
L S + L + P G L D + +N S+Y + V +A+G+ +L
Sbjct: 86 ICLTS-TVQLIMQLMPFGXLLDYVREHKDNI---GSQYLLNWCVQIAKGMNYLE---DRR 138
Query: 681 ILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVT 740
++ DL+ RN+ +K+ + +I D L K++ + + ++ E T
Sbjct: 139 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 198
Query: 741 MAGNVYSFGVILLELLT 757
+V+S+GV + EL+T
Sbjct: 199 HQSDVWSYGVTVWELMT 215
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 16/180 (8%)
Query: 584 IKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD-SAYLFYEYAPKGTL 642
+K LN +I +G +F E ++ S+ NV++ L L S+ S + Y G L
Sbjct: 61 VKSLN---RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 117
Query: 643 FDVLHGCLENALDWASRYSIAVG--VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQ 700
+ + N + I G VA+G+ +L S + DL+ RN L +
Sbjct: 118 RNFIRNETHNP---TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVK 171
Query: 701 IGDIELCKVIDPSKSTGSLSTVAGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ D L + + K S+ G+ V ++ E T + T +V+SFGV+L EL+T
Sbjct: 172 VADFGLARDMY-DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 88/197 (44%), Gaps = 17/197 (8%)
Query: 568 FSTYYKAV-MPSGMSYFIKKLNWSDKIFQLGSHHKFDKEL----EVLGKLSNSNVMTPLA 622
F T YK + +P G K+ + K + + K +KE+ V+ + N +V L
Sbjct: 35 FGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 91
Query: 623 YVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY--SIAVGVAQGLAFLHGFTSNP 680
L S + L + P G L D + E+ + S+Y + V +A+G+ +L
Sbjct: 92 ICLTS-TVQLITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKGMNYLE---DRR 144
Query: 681 ILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVT 740
++ DL+ RN+ +K+ + +I D L K++ + + ++ E T
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 204
Query: 741 MAGNVYSFGVILLELLT 757
+V+S+GV + EL+T
Sbjct: 205 HQSDVWSYGVTVWELMT 221
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 605 ELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY--SI 662
E V+ + N +V L L S + L + P G L D + E+ + S+Y +
Sbjct: 101 EAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVR---EHKDNIGSQYLLNW 156
Query: 663 AVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
V +A+G+ +L ++ DL+ RN+ +K+ + +I D L K++ +
Sbjct: 157 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 213
Query: 723 AGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ ++ E T +V+S+GV + EL+T
Sbjct: 214 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 87/197 (44%), Gaps = 17/197 (8%)
Query: 568 FSTYYKAV-MPSGMSYFIKKLNWSDKIFQLGSHHKFDKEL----EVLGKLSNSNVMTPLA 622
F T YK + +P G K+ + K + + K +KE+ V+ + N +V L
Sbjct: 35 FGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 91
Query: 623 YVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY--SIAVGVAQGLAFLHGFTSNP 680
L S + L + P G L D + +N S+Y + V +A+G+ +L
Sbjct: 92 ICLTS-TVQLITQLMPFGCLLDYVREHKDNI---GSQYLLNWCVQIAKGMNYLE---DRR 144
Query: 681 ILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVT 740
++ DL+ RN+ +K+ + +I D L K++ + + ++ E T
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 204
Query: 741 MAGNVYSFGVILLELLT 757
+V+S+GV + EL+T
Sbjct: 205 HQSDVWSYGVTVWELMT 221
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 16/180 (8%)
Query: 584 IKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD-SAYLFYEYAPKGTL 642
+K LN +I +G +F E ++ S+ NV++ L L S+ S + Y G L
Sbjct: 60 VKSLN---RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 116
Query: 643 FDVLHGCLENALDWASRYSIAVG--VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQ 700
+ + N + I G VA+G+ +L S + DL+ RN L +
Sbjct: 117 RNFIRNETHNP---TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVK 170
Query: 701 IGDIELCKVIDPSKSTGSLSTVAGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ D L + + K S+ G+ V ++ E T + T +V+SFGV+L EL+T
Sbjct: 171 VADFGLARDMY-DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 9/155 (5%)
Query: 605 ELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY--SI 662
E V+ + N +V L L S + L + P G L D + +N S+Y +
Sbjct: 64 EAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNI---GSQYLLNW 119
Query: 663 AVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
V +A+G+ +L ++ DL+ RN+ +K+ + +I D L K++ +
Sbjct: 120 CVQIAEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 176
Query: 723 AGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ ++ E T +V+S+GV + EL+T
Sbjct: 177 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 88/197 (44%), Gaps = 17/197 (8%)
Query: 568 FSTYYKAV-MPSGMSYFIKKLNWSDKIFQLGSHHKFDKEL----EVLGKLSNSNVMTPLA 622
F T YK + +P G K+ + K + + K +KE+ V+ + N +V L
Sbjct: 30 FGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 86
Query: 623 YVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY--SIAVGVAQGLAFLHGFTSNP 680
L S + L + P G L D + E+ + S+Y + V +A+G+ +L
Sbjct: 87 ICLTS-TVQLITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKGMNYLE---DRR 139
Query: 681 ILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVT 740
++ DL+ RN+ +K+ + +I D L K++ + + ++ E T
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 199
Query: 741 MAGNVYSFGVILLELLT 757
+V+S+GV + EL+T
Sbjct: 200 HQSDVWSYGVTVWELMT 216
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 11/125 (8%)
Query: 633 FYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIF 692
F Y P+ D L LE+ + ++ + VA+G+ FL S + DL+ RNI
Sbjct: 132 FVPYKPEDLYKDFL--TLEHLIXYSFQ------VAKGMEFL---ASRKXIHRDLAARNIL 180
Query: 693 LKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVIL 752
L +I D L + I + ++ PE + T+ +V+SFGV+L
Sbjct: 181 LSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 240
Query: 753 LELLT 757
E+ +
Sbjct: 241 WEIFS 245
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 18/164 (10%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY 660
+F KE V+ ++ + N++ L Y+ E+ G L D L C ++
Sbjct: 57 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 116
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS---TG 717
+A ++ + +L + DL+ RN +G+ L KV D S TG
Sbjct: 117 YMATQISSAMEYLE---KKNFIHRDLAARNCL--------VGENHLVKVADFGLSRLMTG 165
Query: 718 SLSTV-AGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
T AG+ + + PE + ++ +V++FGV+L E+ T
Sbjct: 166 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 14/171 (8%)
Query: 599 HHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWAS 658
KF +E + + + +++ L V+ + ++ E G L L + +LD AS
Sbjct: 55 REKFLQEALTMRQFDHPHIVK-LIGVITENPVWIIMELCTLGELRSFLQ-VRKFSLDLAS 112
Query: 659 RYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS----K 714
A ++ LA+L S + D++ RN+ + + ++GD L + ++ S
Sbjct: 113 LILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKA 169
Query: 715 STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQG 765
S G L + ++ PE R T A +V+ FGV + E+L QG
Sbjct: 170 SKGKLP-----IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 215
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 87/197 (44%), Gaps = 17/197 (8%)
Query: 568 FSTYYKAV-MPSGMSYFIKKLNWSDKIFQLGSHHKFDKEL----EVLGKLSNSNVMTPLA 622
F T YK + +P G K+ + K + + K +KE+ V+ + N +V L
Sbjct: 28 FGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 84
Query: 623 YVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY--SIAVGVAQGLAFLHGFTSNP 680
L S + L + P G L D + +N S+Y + V +A+G+ +L
Sbjct: 85 ICLTS-TVQLITQLMPFGCLLDYVREHKDNI---GSQYLLNWCVQIAKGMNYLE---DRR 137
Query: 681 ILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVT 740
++ DL+ RN+ +K+ + +I D L K++ + + ++ E T
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 197
Query: 741 MAGNVYSFGVILLELLT 757
+V+S+GV + EL+T
Sbjct: 198 HQSDVWSYGVTVWELMT 214
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 14/171 (8%)
Query: 599 HHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWAS 658
KF +E + + + +++ L V+ + ++ E G L L + +LD AS
Sbjct: 52 REKFLQEALTMRQFDHPHIVK-LIGVITENPVWIIMELCTLGELRSFLQ-VRKYSLDLAS 109
Query: 659 RYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS----K 714
A ++ LA+L S + D++ RN+ + S ++GD L + ++ S
Sbjct: 110 LILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 166
Query: 715 STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQG 765
S G L + ++ PE R T A +V+ FGV + E+L QG
Sbjct: 167 SKGKLP-----IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 212
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 88/197 (44%), Gaps = 17/197 (8%)
Query: 568 FSTYYKAV-MPSGMSYFIKKLNWSDKIFQLGSHHKFDKEL----EVLGKLSNSNVMTPLA 622
F T YK + +P G K+ + K + + K +KE+ V+ + N +V L
Sbjct: 31 FGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 87
Query: 623 YVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY--SIAVGVAQGLAFLHGFTSNP 680
L S + L + P G L D + E+ + S+Y + V +A+G+ +L
Sbjct: 88 ICLTS-TVQLITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKGMNYLE---DRR 140
Query: 681 ILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVT 740
++ DL+ RN+ +K+ + +I D L K++ + + ++ E T
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 200
Query: 741 MAGNVYSFGVILLELLT 757
+V+S+GV + EL+T
Sbjct: 201 HQSDVWSYGVTVWELMT 217
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 605 ELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY--SI 662
E V+ + N +V L L S + L + P G L D + E+ + S+Y +
Sbjct: 92 EAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVR---EHKDNIGSQYLLNW 147
Query: 663 AVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
V +A+G+ +L ++ DL+ RN+ +K+ + +I D L K++ +
Sbjct: 148 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 204
Query: 723 AGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ ++ E T +V+S+GV + EL+T
Sbjct: 205 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 16/180 (8%)
Query: 584 IKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD-SAYLFYEYAPKGTL 642
+K LN +I +G +F E ++ S+ NV++ L L S+ S + Y G L
Sbjct: 62 VKSLN---RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 118
Query: 643 FDVLHGCLENALDWASRYSIAVG--VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQ 700
+ + N + I G VA+G+ +L S + DL+ RN L +
Sbjct: 119 RNFIRNETHNP---TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVK 172
Query: 701 IGDIELCKVIDPSKSTGSLSTVAGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ D L + + K S+ G+ V ++ E T + T +V+SFGV+L EL+T
Sbjct: 173 VADFGLARDMY-DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 16/180 (8%)
Query: 584 IKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD-SAYLFYEYAPKGTL 642
+K LN +I +G +F E ++ S+ NV++ L L S+ S + Y G L
Sbjct: 63 VKSLN---RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 119
Query: 643 FDVLHGCLENALDWASRYSIAVG--VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQ 700
+ + N + I G VA+G+ +L S + DL+ RN L +
Sbjct: 120 RNFIRNETHNP---TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVK 173
Query: 701 IGDIELCKVIDPSKSTGSLSTVAGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ D L + + K S+ G+ V ++ E T + T +V+SFGV+L EL+T
Sbjct: 174 VADFGLARDMY-DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/235 (19%), Positives = 90/235 (38%), Gaps = 20/235 (8%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S +F +E +V+ LS+ ++ ++ EY G L + L + +
Sbjct: 62 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE-MRHRFQTQ 120
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG 717
+ V + + +L S L DL+ RN + ++ D L + + + T
Sbjct: 121 QLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 177
Query: 718 SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSA 777
S+ + V + PPE + + ++++FGV++ E+ + L K
Sbjct: 178 SVGS-KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS----------LGKMPYERFT 226
Query: 778 QQDKLDHILD-FNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831
+ +HI + R LA V + +C + RP K +L +L+
Sbjct: 227 NSETAEHIAQGLRLYRPHLASEK----VYTIMYSCWHEKADERPTFKILLSNILD 277
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 605 ELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY--SI 662
E V+ + N +V L L S + L + P G L D + E+ + S+Y +
Sbjct: 73 EAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVR---EHKDNIGSQYLLNW 128
Query: 663 AVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
V +A+G+ +L ++ DL+ RN+ +K+ + +I D L K++ +
Sbjct: 129 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 185
Query: 723 AGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ ++ E T +V+S+GV + EL+T
Sbjct: 186 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 87/197 (44%), Gaps = 17/197 (8%)
Query: 568 FSTYYKAV-MPSGMSYFIKKLNWSDKIFQLGSHHKFDKEL----EVLGKLSNSNVMTPLA 622
F T YK + +P G K+ + K + + K +KE+ V+ + N +V L
Sbjct: 28 FGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 84
Query: 623 YVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY--SIAVGVAQGLAFLHGFTSNP 680
L S + L + P G L D + +N S+Y + V +A+G+ +L
Sbjct: 85 ICLTS-TVQLITQLMPFGCLLDYVREHKDNI---GSQYLLNWCVQIAKGMNYLE---DRR 137
Query: 681 ILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVT 740
++ DL+ RN+ +K+ + +I D L K++ + + ++ E T
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 197
Query: 741 MAGNVYSFGVILLELLT 757
+V+S+GV + EL+T
Sbjct: 198 HQSDVWSYGVTVWELMT 214
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 88/197 (44%), Gaps = 17/197 (8%)
Query: 568 FSTYYKAV-MPSGMSYFIKKLNWSDKIFQLGSHHKFDKEL----EVLGKLSNSNVMTPLA 622
F T YK + +P G K+ + K + + K +KE+ V+ + N +V L
Sbjct: 31 FGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 87
Query: 623 YVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY--SIAVGVAQGLAFLHGFTSNP 680
L S + L + P G L D + E+ + S+Y + V +A+G+ +L
Sbjct: 88 ICLTS-TVQLITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKGMNYLE---DRR 140
Query: 681 ILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVT 740
++ DL+ RN+ +K+ + +I D L K++ + + ++ E T
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 200
Query: 741 MAGNVYSFGVILLELLT 757
+V+S+GV + EL+T
Sbjct: 201 HQSDVWSYGVTVWELMT 217
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/171 (19%), Positives = 75/171 (43%), Gaps = 17/171 (9%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVL-----HG------- 648
+F E + +L + NV+ L V + + Y G L + L H
Sbjct: 58 EFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDD 117
Query: 649 --CLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIEL 706
+++AL+ + +A G+ +L +S+ ++ DL+TRN+ + +I D+ L
Sbjct: 118 DRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGL 174
Query: 707 CKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + + L + ++ PE + ++ +++S+GV+L E+ +
Sbjct: 175 FREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 78/184 (42%), Gaps = 11/184 (5%)
Query: 578 SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYA 637
SG+ IK +N + + + E+EVL L + N++ + Y+ E
Sbjct: 46 SGLERVIKTINKDRSQVPM---EQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETC 102
Query: 638 PKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLK--S 695
G L + + + Y +A + Q + L F S ++ DL NI + S
Sbjct: 103 EGGELLERIVSAQARGKALSEGY-VAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTS 161
Query: 696 LKEP-QIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLE 754
P +I D L ++ KS + AG+ Y+ PE + VT +++S GV++
Sbjct: 162 PHSPIKIIDFGLAELF---KSDEHSTNAAGTALYMAPE-VFKRDVTFKCDIWSAGVVMYF 217
Query: 755 LLTG 758
LLTG
Sbjct: 218 LLTG 221
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 80/186 (43%), Gaps = 12/186 (6%)
Query: 578 SGMSY---FIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634
+G Y FIKK S + S + ++E+ +L ++ + N++T L
Sbjct: 29 TGKEYAAKFIKKRRLSSSRRGV-SREEIEREVNILREIRHPNIITLHDIFENKTDVVLIL 87
Query: 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFL- 693
E G LFD L D A+++ + G+ +LH S I DL NI L
Sbjct: 88 ELVSGGELFDFLAEKESLTEDEATQF--LKQILDGVHYLH---SKRIAHFDLKPENIMLL 142
Query: 694 -KSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVIL 752
K++ P+I I+ + ++ + G+ ++ PE + + +++S GVI
Sbjct: 143 DKNVPNPRIKLIDFG-IAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 201
Query: 753 LELLTG 758
LL+G
Sbjct: 202 YILLSG 207
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 18/164 (10%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY 660
+F KE V+ ++ + N++ L Y+ E+ G L D L C +
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLL 114
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS---TG 717
+A ++ + +L + DL+ RN +G+ L KV D S TG
Sbjct: 115 YMATQISSAMEYLE---KKNFIHRDLAARNCL--------VGENHLVKVADFGLSRLMTG 163
Query: 718 SLSTV-AGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
T AG+ + + PE + ++ +V++FGV+L E+ T
Sbjct: 164 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 74/174 (42%), Gaps = 12/174 (6%)
Query: 586 KLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDV 645
K ++DK F E ++G+ + N++ V + EY G+L D
Sbjct: 66 KAGYTDK-----QRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL-DA 119
Query: 646 LHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIE 705
+ + G+ G+ +L ++ + DL+ RNI + S ++ D
Sbjct: 120 FLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSA---VHRDLAARNILVNSNLVCKVSDFG 176
Query: 706 LCKVIDPSKSTGSLSTVAGSV--GYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ +V++ + +T G + + PE + T A +V+S+G+++ E+++
Sbjct: 177 MSRVLE-DDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 16/180 (8%)
Query: 584 IKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD-SAYLFYEYAPKGTL 642
+K LN +I +G +F E ++ S+ NV++ L L S+ S + Y G L
Sbjct: 58 VKSLN---RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 114
Query: 643 FDVLHGCLENALDWASRYSIAVG--VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQ 700
+ + N + I G VA+G+ +L S + DL+ RN L +
Sbjct: 115 RNFIRNETHNP---TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVK 168
Query: 701 IGDIELCKVIDPSKSTGSLSTVAGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ D L + + K S+ G+ V ++ E T + T +V+SFGV+L EL+T
Sbjct: 169 VADFGLARDMY-DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 87/197 (44%), Gaps = 17/197 (8%)
Query: 568 FSTYYKAV-MPSGMSYFIKKLNWSDKIFQLGSHHKFDKEL----EVLGKLSNSNVMTPLA 622
F T YK + +P G K+ + K + + K +KE+ V+ + N +V L
Sbjct: 28 FGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 84
Query: 623 YVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY--SIAVGVAQGLAFLHGFTSNP 680
L S + L + P G L D + +N S+Y + V +A+G+ +L
Sbjct: 85 ICLTS-TVQLITQLMPFGXLLDYVREHKDNI---GSQYLLNWCVQIAKGMNYLE---DRR 137
Query: 681 ILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVT 740
++ DL+ RN+ +K+ + +I D L K++ + + ++ E T
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 197
Query: 741 MAGNVYSFGVILLELLT 757
+V+S+GV + EL+T
Sbjct: 198 HQSDVWSYGVTVWELMT 214
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 8/165 (4%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S + ++E+ +L ++ + N++T L E G LFD L D A
Sbjct: 72 SREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEA 131
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFL--KSLKEPQIGDIELCKVIDPSKS 715
+++ + G+ +LH S I DL NI L K++ P+I I+ + ++
Sbjct: 132 TQF--LKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFG-IAHKIEA 185
Query: 716 TGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKT 760
+ G+ ++ PE + + +++S GVI LL+G +
Sbjct: 186 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 230
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 73/182 (40%), Gaps = 15/182 (8%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVL--HGCLENALD 655
S K +E+ ++ L++ N++ + + YL EYA G +FD L HG ++
Sbjct: 56 SLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA 115
Query: 656 WASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715
A I V + H I+ DL N+ L + +I D +
Sbjct: 116 RAKFRQIVSAV----QYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFS---NEFTF 165
Query: 716 TGSLSTVAGSVGYIPPEYAYTMRVTMAG-NVYSFGVILLELLTGKTAVNQGN--ELAKWV 772
L GS Y PE + +V+S GVIL L++G + N EL + V
Sbjct: 166 GNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 225
Query: 773 LR 774
LR
Sbjct: 226 LR 227
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 9/155 (5%)
Query: 605 ELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY--SI 662
E V+ + N +V L L S + L + P G L D + +N S+Y +
Sbjct: 61 EAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNI---GSQYLLNW 116
Query: 663 AVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
V +A+G+ +L ++ DL+ RN+ +K+ + +I D L K++ +
Sbjct: 117 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 173
Query: 723 AGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ ++ E T +V+S+GV + EL+T
Sbjct: 174 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 18/164 (10%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY 660
+F KE V+ ++ + N++ L Y+ E+ G L D L C +
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLL 114
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS---TG 717
+A ++ + +L + DL+ RN +G+ L KV D S TG
Sbjct: 115 YMATQISSAMEYLE---KKNFIHRDLAARNCL--------VGENHLVKVADFGLSRLMTG 163
Query: 718 SLSTV-AGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
T AG+ + + PE + ++ +V++FGV+L E+ T
Sbjct: 164 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 18/164 (10%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY 660
+F KE V+ ++ + N++ L Y+ E+ G L D L C +
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLL 114
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS---TG 717
+A ++ + +L + DL+ RN +G+ L KV D S TG
Sbjct: 115 YMATQISSAMEYLE---KKNFIHRDLAARNCL--------VGENHLVKVADFGLSRLMTG 163
Query: 718 SLSTV-AGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
T AG+ + + PE + ++ +V++FGV+L E+ T
Sbjct: 164 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 18/164 (10%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY 660
+F KE V+ ++ + N++ L Y+ E+ G L D L C +
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLL 119
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS---TG 717
+A ++ + +L + DL+ RN +G+ L KV D S TG
Sbjct: 120 YMATQISSAMEYLE---KKNFIHRDLAARNCL--------VGENHLVKVADFGLSRLMTG 168
Query: 718 SLSTV-AGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
T AG+ + + PE + ++ +V++FGV+L E+ T
Sbjct: 169 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 14/170 (8%)
Query: 600 HKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASR 659
KF +E + + + +++ L V+ + ++ E G L L + +LD AS
Sbjct: 436 EKFLQEALTMRQFDHPHIVK-LIGVITENPVWIIMELCTLGELRSFLQ-VRKFSLDLASL 493
Query: 660 YSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS----KS 715
A ++ LA+L S + D++ RN+ + + ++GD L + ++ S S
Sbjct: 494 ILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKAS 550
Query: 716 TGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQG 765
G L + ++ PE R T A +V+ FGV + E+L QG
Sbjct: 551 KGKLP-----IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 595
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
VA+G+ FL S + DL+ RNI L +I D L + I
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 726 VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ ++ PE + T+ +V+SFGV+L E+ +
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 14/170 (8%)
Query: 600 HKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASR 659
KF +E + + + +++ L V+ + ++ E G L L + +LD AS
Sbjct: 436 EKFLQEALTMRQFDHPHIVK-LIGVITENPVWIIMELCTLGELRSFLQ-VRKFSLDLASL 493
Query: 660 YSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS----KS 715
A ++ LA+L S + D++ RN+ + S ++GD L + ++ S S
Sbjct: 494 ILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 550
Query: 716 TGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQG 765
G L + ++ PE R T A +V+ FGV + E+L QG
Sbjct: 551 KGKLP-----IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 595
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
VA+G+ FL S + DL+ RNI L +I D L + I
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 726 VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ ++ PE + T+ +V+SFGV+L E+ +
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
VA+G+ FL S + DL+ RNI L +I D L + I
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 726 VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ ++ PE + T+ +V+SFGV+L E+ +
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 64/154 (41%), Gaps = 22/154 (14%)
Query: 612 LSNSNVMTPLAY--------VLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
L+ +NVM L + V+ + Y+ E+ KG+L D L + +
Sbjct: 225 LAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFS 284
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+A+G+AF+ + DL NI + + +I D L +V
Sbjct: 285 AQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARV-----------GAK 330
Query: 724 GSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + PE T+ +V+SFG++L+E++T
Sbjct: 331 FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 364
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 67/166 (40%), Gaps = 19/166 (11%)
Query: 606 LEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHG--------------CLE 651
++++GK + N++ L Y+ YA KG L + L E
Sbjct: 94 MKMIGK--HKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 652 NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711
+ + S +A+G+ +L S + DL+ RN+ + +I D L + I+
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 712 PSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ V ++ PE + T +V+SFGV++ E+ T
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 74/162 (45%), Gaps = 6/162 (3%)
Query: 596 LGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALD 655
L + KF E ++ L + +++ L ++ + ++ E P G L L +N+L
Sbjct: 66 LDNKEKFMSEAVIMKNLDHPHIVK-LIGIIEEEPTWIIMELYPYGELGHYLER-NKNSLK 123
Query: 656 WASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715
+ ++ + + +A+L + D++ RNI + S + ++GD L + I+ +
Sbjct: 124 VLTLVLYSLQICKAMAYLESINC---VHRDIAVRNILVASPECVKLGDFGLSRYIE-DED 179
Query: 716 TGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
S + ++ PE R T A +V+ F V + E+L+
Sbjct: 180 YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS 221
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 71/163 (43%), Gaps = 8/163 (4%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S + ++E+ +L ++ + N++T L E G LFD L D A
Sbjct: 58 SREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEA 117
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFL--KSLKEPQIGDIELCKVIDPSKS 715
+++ + G+ +LH S I DL NI L K++ P+I I+ + ++
Sbjct: 118 TQF--LKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFG-IAHKIEA 171
Query: 716 TGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 758
+ G+ ++ PE + + +++S GVI LL+G
Sbjct: 172 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 18/164 (10%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY 660
+F KE V+ ++ + N++ L Y+ E+ G L D L C +
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLL 114
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS---TG 717
+A ++ + +L + DL+ RN +G+ L KV D S TG
Sbjct: 115 YMATQISSAMEYLE---KKNFIHRDLAARNCL--------VGENHLVKVADFGLSRLMTG 163
Query: 718 SLSTV-AGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
T AG+ + + PE + ++ +V++FGV+L E+ T
Sbjct: 164 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 18/165 (10%)
Query: 600 HKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASR 659
+F KE V+ ++ + N++ L Y+ E+ G L D L C +
Sbjct: 52 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 111
Query: 660 YSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS---T 716
+A ++ + +L + DL+ RN +G+ L KV D S T
Sbjct: 112 LYMATQISSAMEYLE---KKNFIHRDLAARNCL--------VGENHLVKVADFGLSRLMT 160
Query: 717 GSLSTV-AGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
G T AG+ + + PE + ++ +V++FGV+L E+ T
Sbjct: 161 GDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
VA+G+ FL S + DL+ RNI L +I D L + I
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 726 VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ ++ PE + T+ +V+SFGV+L E+ +
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 9/129 (6%)
Query: 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
YL EY G LF L D A Y + +A L LH I+ DL N
Sbjct: 97 YLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMA--LGHLH---QKGIIYRDLKPEN 151
Query: 691 IFLKSLKEPQIGDIELCKVIDPSKSTGSLS-TVAGSVGYIPPEYAYTMRVTMAGNVYSFG 749
I L ++ D LCK S G+++ T G++ Y+ PE A + +S G
Sbjct: 152 IMLNHQGHVKLTDFGLCK---ESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLG 208
Query: 750 VILLELLTG 758
++ ++LTG
Sbjct: 209 ALMYDMLTG 217
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
VA+G+ FL S + DL+ RNI L +I D L + I
Sbjct: 153 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLP 209
Query: 726 VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ ++ PE + T+ +V+SFGV+L E+ +
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 74/162 (45%), Gaps = 6/162 (3%)
Query: 596 LGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALD 655
L + KF E ++ L + +++ L ++ + ++ E P G L L +N+L
Sbjct: 54 LDNKEKFMSEAVIMKNLDHPHIVK-LIGIIEEEPTWIIMELYPYGELGHYLER-NKNSLK 111
Query: 656 WASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715
+ ++ + + +A+L + D++ RNI + S + ++GD L + I+ +
Sbjct: 112 VLTLVLYSLQICKAMAYLESINC---VHRDIAVRNILVASPECVKLGDFGLSRYIE-DED 167
Query: 716 TGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
S + ++ PE R T A +V+ F V + E+L+
Sbjct: 168 YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS 209
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 665 GVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAG 724
G+A G+ +L + + DL+ RNI + S ++ D L +V++ + +T G
Sbjct: 155 GIASGMKYLSDMGA---VHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEAAYTTRGG 210
Query: 725 SV--GYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ + PE + T A +V+S+G++L E+++
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
VA+G+ FL S + DL+ RNI L +I D L + I
Sbjct: 153 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 209
Query: 726 VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ ++ PE + T+ +V+SFGV+L E+ +
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 70/164 (42%), Gaps = 18/164 (10%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY 660
+F KE V+ ++ + N++ L Y+ E+ G L D L C ++
Sbjct: 301 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 360
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS---TG 717
+A ++ + +L + +L+ RN +G+ L KV D S TG
Sbjct: 361 YMATQISSAMEYL---EKKNFIHRNLAARNCL--------VGENHLVKVADFGLSRLMTG 409
Query: 718 SLSTV-AGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
T AG+ + + PE + ++ +V++FGV+L E+ T
Sbjct: 410 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 70/164 (42%), Gaps = 18/164 (10%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY 660
+F KE V+ ++ + N++ L Y+ E+ G L D L C ++
Sbjct: 259 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 318
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS---TG 717
+A ++ + +L + +L+ RN +G+ L KV D S TG
Sbjct: 319 YMATQISSAMEYLE---KKNFIHRNLAARNCL--------VGENHLVKVADFGLSRLMTG 367
Query: 718 SLSTV-AGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
T AG+ + + PE + ++ +V++FGV+L E+ T
Sbjct: 368 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D LC+ D + TG ++T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTD-DEMTGYVATR--- 186
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3A79|A Chain A, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
pdb|3A7B|A Chain A, Crystal Structure Of Tlr2-Streptococcus Pneumoniae
Lipoteichoic Acid Complex
pdb|3A7C|A Chain A, Crystal Structure Of Tlr2-Pe-Dtpa Complex
Length = 580
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 29/116 (25%)
Query: 165 SVPGGITRFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLS---VNMLEGSLPQNMSPNLV 221
S+P G+T +++LDLS+NK+ + DL + NLQ + L +N +EG
Sbjct: 45 SIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGD---------- 94
Query: 222 RLRLGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQN 277
F SL L +L+L +N + + G SL LNL N
Sbjct: 95 ----------------AFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGN 134
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 88/194 (45%), Gaps = 9/194 (4%)
Query: 565 KTRFSTYYKA-VMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAY 623
+ +FS Y+A + G+ +KK+ D + + KE+++L +L++ NV+ A
Sbjct: 42 RGQFSEVYRAACLLDGVPVALKKVQIFD-LMDAKARADCIKEIDLLKQLNHPNVIKYYAS 100
Query: 624 VLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASR--YSIAVGVAQGLAFLHGFTSNPI 681
+ + + E A G L ++ + R + V + L +H S +
Sbjct: 101 FIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRV 157
Query: 682 LLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTM 741
+ D+ N+F+ + ++GD+ L + SK+T + S V G+ Y+ PE +
Sbjct: 158 MHRDIKPANVFITATGVVKLGDLGLGRFFS-SKTTAAHSLV-GTPYYMSPERIHENGYNF 215
Query: 742 AGNVYSFGVILLEL 755
+++S G +L E+
Sbjct: 216 KSDIWSLGCLLYEM 229
>pdb|2Z81|A Chain A, Crystal Structure Of The Tlr1-tlr2 Heterodimer Induced By
Binding Of A Tri-acylated Lipopeptide
pdb|2Z82|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 29/116 (25%)
Query: 165 SVPGGITRFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLS---VNMLEGSLPQNMSPNLV 221
S+P G+T +++LDLS+NK+ + DL + NLQ + L +N +EG
Sbjct: 19 SIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGD---------- 68
Query: 222 RLRLGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQN 277
F SL L +L+L +N + + G SL LNL N
Sbjct: 69 ----------------AFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGN 108
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 67/166 (40%), Gaps = 19/166 (11%)
Query: 606 LEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHG--------------CLE 651
++++GK + N++ L Y+ YA KG L + L E
Sbjct: 94 MKMIGK--HKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 652 NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711
+ + S +A+G+ +L S + DL+ RN+ + +I D L + I+
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 712 PSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ V ++ PE + T +V+SFGV++ E+ T
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 14/99 (14%)
Query: 665 GVAQGLAFLH--GFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVI--DPSKSTGSLS 720
G+A G+ +L G+ DL+ RNI + S ++ D L +V+ DP + +
Sbjct: 126 GIASGMKYLSDMGYVHR-----DLAARNILINSNLVCKVSDFGLSRVLEDDPE---AAYT 177
Query: 721 TVAGSV--GYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
T G + + PE + T A +V+S+G++L E+++
Sbjct: 178 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 80/188 (42%), Gaps = 21/188 (11%)
Query: 605 ELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAV 664
E+ V+ +L ++N++ + + L EY G LFD + ++ + + +I
Sbjct: 136 EISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRI---IDESYNLTELDTILF 192
Query: 665 --GVAQGLAFLHGFTSNPILLLDLSTRNIFL--KSLKEPQIGDIELCKVIDPSKSTGSLS 720
+ +G+ +H IL LDL NI + K+ +I D L + P + L
Sbjct: 193 MKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE---KLK 246
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG-------KTAVNQGNELA-KWV 772
G+ ++ PE V+ +++S GVI LL+G A N LA +W
Sbjct: 247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWD 306
Query: 773 LRNSAQQD 780
L + QD
Sbjct: 307 LEDEEFQD 314
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 73/182 (40%), Gaps = 15/182 (8%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVL--HGCLENALD 655
S K +E+ ++ L++ N++ + + YL EYA G +FD L HG ++
Sbjct: 56 SLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA 115
Query: 656 WASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715
A I V + H I+ DL N+ L + +I D +
Sbjct: 116 RAKFRQIVSAV----QYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFS---NEFTF 165
Query: 716 TGSLSTVAGSVGYIPPEYAYTMRVTMAG-NVYSFGVILLELLTGKTAVNQGN--ELAKWV 772
L G+ Y PE + +V+S GVIL L++G + N EL + V
Sbjct: 166 GNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 225
Query: 773 LR 774
LR
Sbjct: 226 LR 227
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 73/174 (41%), Gaps = 12/174 (6%)
Query: 586 KLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDV 645
K ++DK F E ++G+ + N++ V + EY G+L D
Sbjct: 51 KAGYTDK-----QRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL-DA 104
Query: 646 LHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIE 705
+ + G+ G+ +L + + DL+ RNI + S ++ D
Sbjct: 105 FLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFG 161
Query: 706 LCKVIDPSKSTGSLSTVAGSV--GYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ +V++ + +T G + + PE + T A +V+S+G+++ E+++
Sbjct: 162 MSRVLE-DDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 605 ELEVLGKLSNSNVMTPLAYVL--ASDSAYLFYEYAPKGTLFDVL-HGCLENA-LDWASRY 660
E+ +L +L + N++ ++ + + Y+ EY G L V+ G E LD
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 661 SIAVGVAQGLAFLHGFTS--NPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGS 718
+ + L H + + +L DL N+FL + ++GD L ++++ T
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN--HDTSF 172
Query: 719 LSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLEL 755
T G+ Y+ PE M +++S G +L EL
Sbjct: 173 AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Query: 665 GVAQGLAFLH--GFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
G+A G+ +L G+ DL+ RNI + S ++ D L +V++ + +T
Sbjct: 155 GIASGMKYLSDMGYVHR-----DLAARNILINSNLVCKVSDFGLSRVLE-DDPEAAYTTR 208
Query: 723 AGSV--GYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
G + + PE + T A +V+S+G++L E+++
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 38.1 bits (87), Expect = 0.018, Method: Composition-based stats.
Identities = 45/235 (19%), Positives = 90/235 (38%), Gaps = 20/235 (8%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S +F +E +V+ LS+ ++ ++ EY G L + L + +
Sbjct: 53 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE-MRHRFQTQ 111
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG 717
+ V + + +L S L DL+ RN + ++ D L + + + T
Sbjct: 112 QLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 168
Query: 718 SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSA 777
S+ + V + PPE + + ++++FGV++ E+ + L K
Sbjct: 169 SVGS-KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS----------LGKMPYERFT 217
Query: 778 QQDKLDHILD-FNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831
+ +HI + R LA V + +C + RP K +L +L+
Sbjct: 218 NSETAEHIAQGLRLYRPHLASEK----VYTIMYSCWHEKADERPTFKILLSNILD 268
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 38.1 bits (87), Expect = 0.018, Method: Composition-based stats.
Identities = 45/235 (19%), Positives = 90/235 (38%), Gaps = 20/235 (8%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S +F +E +V+ LS+ ++ ++ EY G L + L + +
Sbjct: 46 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE-MRHRFQTQ 104
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG 717
+ V + + +L S L DL+ RN + ++ D L + + + T
Sbjct: 105 QLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 161
Query: 718 SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSA 777
S+ + V + PPE + + ++++FGV++ E+ + L K
Sbjct: 162 SVGS-KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS----------LGKMPYERFT 210
Query: 778 QQDKLDHILD-FNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831
+ +HI + R LA V + +C + RP K +L +L+
Sbjct: 211 NSETAEHIAQGLRLYRPHLASEK----VYTIMYSCWHEKADERPTFKILLSNILD 261
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 38.1 bits (87), Expect = 0.018, Method: Composition-based stats.
Identities = 45/235 (19%), Positives = 90/235 (38%), Gaps = 20/235 (8%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S +F +E +V+ LS+ ++ ++ EY G L + L + +
Sbjct: 47 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE-MRHRFQTQ 105
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG 717
+ V + + +L S L DL+ RN + ++ D L + + + T
Sbjct: 106 QLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 162
Query: 718 SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSA 777
S+ + V + PPE + + ++++FGV++ E+ + L K
Sbjct: 163 SVGS-KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS----------LGKMPYERFT 211
Query: 778 QQDKLDHILD-FNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831
+ +HI + R LA V + +C + RP K +L +L+
Sbjct: 212 NSETAEHIAQGLRLYRPHLASEK----VYTIMYSCWHEKADERPTFKILLSNILD 262
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 38.1 bits (87), Expect = 0.018, Method: Composition-based stats.
Identities = 45/235 (19%), Positives = 90/235 (38%), Gaps = 20/235 (8%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S +F +E +V+ LS+ ++ ++ EY G L + L + +
Sbjct: 42 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE-MRHRFQTQ 100
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG 717
+ V + + +L S L DL+ RN + ++ D L + + + T
Sbjct: 101 QLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 157
Query: 718 SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSA 777
S+ + V + PPE + + ++++FGV++ E+ + L K
Sbjct: 158 SVGS-KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS----------LGKMPYERFT 206
Query: 778 QQDKLDHILD-FNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831
+ +HI + R LA V + +C + RP K +L +L+
Sbjct: 207 NSETAEHIAQGLRLYRPHLASEK----VYTIMYSCWHEKADERPTFKILLSNILD 257
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 16/185 (8%)
Query: 578 SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYA 637
+G +K LN KI L K +E++ L + +++ + ++ EY
Sbjct: 40 TGHKVAVKILN-RQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYV 98
Query: 638 PKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLK 697
G LFD + C LD + + G+ + H + ++ DL N+ L +
Sbjct: 99 SGGELFDYI--CKNGRLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHM 153
Query: 698 EPQIGDIELCKVIDPSKSTGS-LSTVAGSVGYIPPEYAYTMRVTMAG---NVYSFGVILL 753
+I D L ++ S G L GS Y PE + R+ AG +++S GVIL
Sbjct: 154 NAKIADFGLSNMM----SDGEFLRXSCGSPNYAAPE-VISGRL-YAGPEVDIWSSGVILY 207
Query: 754 ELLTG 758
LL G
Sbjct: 208 ALLCG 212
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 87/197 (44%), Gaps = 17/197 (8%)
Query: 568 FSTYYKAV-MPSGMSYFIKKLNWSDKIFQLGSHHKFDKEL----EVLGKLSNSNVMTPLA 622
F T YK + +P G K+ + K + + K +KE+ V+ + N +V L
Sbjct: 30 FGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 86
Query: 623 YVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY--SIAVGVAQGLAFLHGFTSNP 680
L S + L + P G L D + E+ + S+Y + V +A+G+ +L
Sbjct: 87 ICLTS-TVQLIMQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKGMNYLE---DRR 139
Query: 681 ILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVT 740
++ DL+ RN+ +K+ + +I D K++ + + ++ E T
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 199
Query: 741 MAGNVYSFGVILLELLT 757
+V+S+GV + EL+T
Sbjct: 200 HQSDVWSYGVTVWELMT 216
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 67/160 (41%), Gaps = 11/160 (6%)
Query: 602 FDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYS 661
F E ++G+ + N++ V A + EY G+L D +
Sbjct: 97 FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL-DTFLRTHDGQFTIMQLVG 155
Query: 662 IAVGVAQGLAFLH--GFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSL 719
+ GV G+ +L G+ DL+ RN+ + S ++ D L +V++ +
Sbjct: 156 MLRGVGAGMRYLSDLGYVHR-----DLAARNVLVDSNLVCKVSDFGLSRVLE-DDPDAAY 209
Query: 720 STVAGSV--GYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+T G + + PE + A +V+SFGV++ E+L
Sbjct: 210 TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 67/160 (41%), Gaps = 11/160 (6%)
Query: 602 FDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYS 661
F E ++G+ + N++ V A + EY G+L D +
Sbjct: 97 FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL-DTFLRTHDGQFTIMQLVG 155
Query: 662 IAVGVAQGLAFLH--GFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSL 719
+ GV G+ +L G+ DL+ RN+ + S ++ D L +V++ +
Sbjct: 156 MLRGVGAGMRYLSDLGYVHR-----DLAARNVLVDSNLVCKVSDFGLSRVLE-DDPDAAX 209
Query: 720 STVAGSV--GYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+T G + + PE + A +V+SFGV++ E+L
Sbjct: 210 TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 73/174 (41%), Gaps = 12/174 (6%)
Query: 586 KLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDV 645
K ++DK F E ++G+ + N++ V + EY G+L D
Sbjct: 45 KAGYTDK-----QRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL-DA 98
Query: 646 LHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIE 705
+ + G+ G+ +L + + DL+ RNI + S ++ D
Sbjct: 99 FLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFG 155
Query: 706 LCKVIDPSKSTGSLSTVAGSV--GYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ +V++ + +T G + + PE + T A +V+S+G+++ E+++
Sbjct: 156 MSRVLE-DDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 665 GVAQGLAFLH--GFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
G+A G+ +L G+ DL+ RNI + S ++ D L +VI+ +T
Sbjct: 153 GIAAGMRYLADMGYVHR-----DLAARNILVNSNLVCKVSDFGLSRVIE-DDPEAVYTTT 206
Query: 723 AGS--VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
G V + PE + T A +V+S+G+++ E+++
Sbjct: 207 GGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 9/155 (5%)
Query: 605 ELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY--SI 662
E V+ + N +V L L S + L + P G L D + +N S+Y +
Sbjct: 69 EAYVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNI---GSQYLLNW 124
Query: 663 AVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
V +A+G+ +L ++ DL+ RN+ +K+ + +I D K++ +
Sbjct: 125 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 723 AGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ ++ E T +V+S+GV + EL+T
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 87/197 (44%), Gaps = 17/197 (8%)
Query: 568 FSTYYKAV-MPSGMSYFIKKLNWSDKIFQLGSHHKFDKEL----EVLGKLSNSNVMTPLA 622
F T YK + +P G K+ + K + + K +KE+ V+ + N +V L
Sbjct: 30 FGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 86
Query: 623 YVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY--SIAVGVAQGLAFLHGFTSNP 680
L S + L + P G L D + E+ + S+Y + V +A+G+ +L
Sbjct: 87 ICLTS-TVQLITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKGMNYLE---DRR 139
Query: 681 ILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVT 740
++ DL+ RN+ +K+ + +I D K++ + + ++ E T
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 199
Query: 741 MAGNVYSFGVILLELLT 757
+V+S+GV + EL+T
Sbjct: 200 HQSDVWSYGVTVWELMT 216
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 65/162 (40%), Gaps = 20/162 (12%)
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
+A +A G+A+L+ +N + DL+ RN + +IGD + + I +
Sbjct: 127 QMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGG 183
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQG--NELAKWVLRNSAQ 778
V ++ PE T +V+SFGV+L E+ T QG NE +
Sbjct: 184 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL 243
Query: 779 QDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARP 820
DK D+ D +L++ C +P+ RP
Sbjct: 244 LDKPDNCPDM---------------LLELMRMCWQYNPKMRP 270
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 38.1 bits (87), Expect = 0.022, Method: Composition-based stats.
Identities = 36/163 (22%), Positives = 76/163 (46%), Gaps = 8/163 (4%)
Query: 596 LGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALD 655
L + KF E ++ L + +++ L ++ + ++ E P G L L +N+L
Sbjct: 50 LDNKEKFMSEAVIMKNLDHPHIVK-LIGIIEEEPTWIIMELYPYGELGHYLERN-KNSLK 107
Query: 656 WASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVI-DPSK 714
+ ++ + + +A+L + D++ RNI + S + ++GD L + I D
Sbjct: 108 VLTLVLYSLQICKAMAYLESINC---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 164
Query: 715 STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
S++ + + ++ PE R T A +V+ F V + E+L+
Sbjct: 165 YKASVTRLP--IKWMSPESINFRRFTTASDVWMFAVCMWEILS 205
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 87/197 (44%), Gaps = 17/197 (8%)
Query: 568 FSTYYKAV-MPSGMSYFIKKLNWSDKIFQLGSHHKFDKEL----EVLGKLSNSNVMTPLA 622
F T YK + +P G K+ + K + + K +KE+ V+ + N +V L
Sbjct: 35 FGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 91
Query: 623 YVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY--SIAVGVAQGLAFLHGFTSNP 680
L S + L + P G L D + E+ + S+Y + V +A+G+ +L
Sbjct: 92 ICLTS-TVQLITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKGMNYLE---DRR 144
Query: 681 ILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVT 740
++ DL+ RN+ +K+ + +I D K++ + + ++ E T
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 204
Query: 741 MAGNVYSFGVILLELLT 757
+V+S+GV + EL+T
Sbjct: 205 HQSDVWSYGVTVWELMT 221
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 69/157 (43%), Gaps = 11/157 (7%)
Query: 605 ELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAV 664
E ++G+ + N++ V S + EY G+L D + +
Sbjct: 73 EASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSL-DTFLKKNDGQFTVIQLVGMLR 131
Query: 665 GVAQGLAFLH--GFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
G++ G+ +L G+ DL+ RNI + S ++ D L +V++ + +T
Sbjct: 132 GISAGMKYLSDMGYVHR-----DLAARNILINSNLVCKVSDFGLSRVLE-DDPEAAYTTR 185
Query: 723 AGSV--GYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
G + + PE + T A +V+S+G+++ E+++
Sbjct: 186 GGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 9/155 (5%)
Query: 605 ELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY--SI 662
E V+ + N +V L L S + L + P G L D + +N S+Y +
Sbjct: 71 EAYVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNI---GSQYLLNW 126
Query: 663 AVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
V +A+G+ +L ++ DL+ RN+ +K+ + +I D K++ +
Sbjct: 127 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 183
Query: 723 AGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ ++ E T +V+S+GV + EL+T
Sbjct: 184 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 18/164 (10%)
Query: 601 KFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY 660
+F KE V+ ++ + N++ L Y+ E+ G L D L C +
Sbjct: 262 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLL 321
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS---TG 717
+A ++ + +L + +L+ RN +G+ L KV D S TG
Sbjct: 322 YMATQISSAMEYLE---KKNFIHRNLAARNCL--------VGENHLVKVADFGLSRLMTG 370
Query: 718 SLSTV-AGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
T AG+ + + PE + ++ +V++FGV+L E+ T
Sbjct: 371 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 67/165 (40%), Gaps = 12/165 (7%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S ++E+ +L ++ + NV+T L E G LFD L + +L
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEE 114
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFL--KSLKEPQIG--DIELCKVIDPS 713
+ G+ +LH I DL NI L +++ +P+I D L ID
Sbjct: 115 EATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 171
Query: 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 758
+ G+ ++ PE + + +++S GVI LL+G
Sbjct: 172 ---NEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 32/217 (14%)
Query: 211 SLPQNMSPNLVRLRLGTNLLIGEIPSATFTSLEKLTYLELDNN--SFTGMIPQQLGSCRS 268
S+P + + RL L +N L +P F L +LT L L +N SF G Q S
Sbjct: 21 SVPTGIPSSATRLELESNKL-QSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTS 79
Query: 269 LTLLNLAQNELNGSLPIQLGSLGILQVMNLQLNKLSGEIPSQFSQLKLLSTMNISWNSLS 328
L L+L+ NG + + LG+ Q+ +L + + S+FS LS N+ + +S
Sbjct: 80 LKYLDLS---FNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFS--VFLSLRNLIYLDIS 134
Query: 329 GSIPSFXXXXXXXXXXXXXXXXXXGSIPNSITN-MRSLIELQLGGNQLSGT-IPMMPPRL 386
+ N I N + SL L++ GN +P + L
Sbjct: 135 HTHTRVAF--------------------NGIFNGLSSLEVLKMAGNSFQENFLPDIFTEL 174
Query: 387 Q--IALNLSSNLFEGPIPTTFARLNGLEVLDLSNNRF 421
+ L+LS E PT F L+ L+VL++S+N F
Sbjct: 175 RNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNF 211
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 90/225 (40%), Gaps = 26/225 (11%)
Query: 94 IPKGIADYRNLTLIDLSANNLSG---SVPDRIGELSKLEVLILSANNLDGRLPTSLASIT 150
+P GI + T ++L +N L V D++ +L+KL LS+N L S
Sbjct: 22 VPTGIPS--SATRLELESNKLQSLPHGVFDKLTQLTKLS---LSSNGL------SFKGCC 70
Query: 151 TLSRFAANQNKFSG-SVPGGIT--------RFLRNLDLSYNKLLGVIPIDL-LSHPNLQT 200
+ S F K+ S G IT L +LD ++ L + + LS NL
Sbjct: 71 SQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 130
Query: 201 IDLSVNMLEGSLPQ--NMSPNLVRLRLGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGM 258
+D+S + N +L L++ N FT L LT+L+L +
Sbjct: 131 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQL 190
Query: 259 IPQQLGSCRSLTLLNLAQNELNGSLPIQLGSLGILQVMNLQLNKL 303
P S SL +LN++ N L LQV++ LN +
Sbjct: 191 SPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHI 235
>pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1
pdb|1XEC|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
pdb|1XEC|B Chain B, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
Length = 329
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 100/239 (41%), Gaps = 32/239 (13%)
Query: 93 EIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLDGRLPTSLASITTL 152
++PK + + L+DL N ++ L L LIL N + P + A + L
Sbjct: 45 KVPKDLPP--DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKL 102
Query: 153 SRFAANQNKFSGSVPGGITRFLRNLDLSYNKLLGV-----------IPIDLLSHPNLQTI 201
R ++N+ +P + + L+ L + N++ V I ++L ++P L++
Sbjct: 103 ERLYLSKNQLK-ELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNP-LKSS 160
Query: 202 DLSVNMLEG---------------SLPQNMSPNLVRLRLGTNLLIGEIPSATFTSLEKLT 246
+ +G ++PQ + P+L L L N I ++ +A+ L L
Sbjct: 161 GIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGN-KITKVDAASLKGLNNLA 219
Query: 247 YLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNGSLPIQLGSLGILQVMNLQLNKLSG 305
L L NS + + L + L L+L N+L +P L +QV+ L N +S
Sbjct: 220 KLGLSFNSISAVDNGSLANTPHLRELHLNNNKL-VKVPGGLADHKYIQVVYLHNNNISA 277
>pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin,
The Archetypal Small Leucine-Rich Repeat Proteoglycan
Length = 330
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 100/239 (41%), Gaps = 32/239 (13%)
Query: 93 EIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLDGRLPTSLASITTL 152
++PK + + L+DL N ++ L L LIL N + P + A + L
Sbjct: 45 KVPKDLPP--DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKL 102
Query: 153 SRFAANQNKFSGSVPGGITRFLRNLDLSYNKLLGV-----------IPIDLLSHPNLQTI 201
R ++N+ +P + + L+ L + N++ V I ++L ++P L++
Sbjct: 103 ERLYLSKNQLK-ELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNP-LKSS 160
Query: 202 DLSVNMLEG---------------SLPQNMSPNLVRLRLGTNLLIGEIPSATFTSLEKLT 246
+ +G ++PQ + P+L L L N I ++ +A+ L L
Sbjct: 161 GIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGN-KITKVDAASLKGLNNLA 219
Query: 247 YLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNGSLPIQLGSLGILQVMNLQLNKLSG 305
L L NS + + L + L L+L N+L +P L +QV+ L N +S
Sbjct: 220 KLGLSFNSISAVDNGSLANTPHLRELHLNNNKL-VKVPGGLADHKYIQVVYLHNNNISA 277
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 49/115 (42%), Gaps = 15/115 (13%)
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKST---G 717
A + Q L LH N I+ DL NI LK I KVID S
Sbjct: 204 KFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGI------KVIDFGSSCYEHQ 254
Query: 718 SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAV---NQGNELA 769
+ T S Y PE R M +++S G IL ELLTG + ++G++LA
Sbjct: 255 RVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLA 309
>pdb|2Z80|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
pdb|2Z80|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 353
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 58/138 (42%), Gaps = 27/138 (19%)
Query: 165 SVPGGITRFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMSPNLVRLR 224
S+P G+T +++LDLS N++ + DL NLQ + L+ N
Sbjct: 45 SIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNG----------------- 87
Query: 225 LGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNEL----N 280
I I +F+SL L +L+L N + + SLT LNL N
Sbjct: 88 ------INTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGE 141
Query: 281 GSLPIQLGSLGILQVMNL 298
SL L L IL+V N+
Sbjct: 142 TSLFSHLTKLQILRVGNM 159
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 37/80 (46%)
Query: 243 EKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNGSLPIQLGSLGILQVMNLQLNK 302
E + L+L NN T + L C +L L L N +N SLG L+ ++L N
Sbjct: 52 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNY 111
Query: 303 LSGEIPSQFSQLKLLSTMNI 322
LS S F L L+ +N+
Sbjct: 112 LSNLSSSWFKPLSSLTFLNL 131
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 9/155 (5%)
Query: 605 ELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY--SI 662
E V+ + N +V L L S + L + P G L D + +N S+Y +
Sbjct: 67 EAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNI---GSQYLLNW 122
Query: 663 AVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTV 722
V +A+G+ +L ++ DL+ RN+ +K+ + +I D K++ +
Sbjct: 123 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 179
Query: 723 AGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ ++ E T +V+S+GV + EL+T
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 68/159 (42%), Gaps = 7/159 (4%)
Query: 602 FDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYS 661
F E ++G+ + NV+ V S + E+ G+L L +
Sbjct: 55 FLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQN-DGQFTVIQLVG 113
Query: 662 IAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLST 721
+ G+A G+ +L + L+ RNI + S ++ D L + ++ S + ++
Sbjct: 114 MLRGIAAGMKYLADMN---YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTS 170
Query: 722 VAGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
G + + PE + T A +V+S+G+++ E+++
Sbjct: 171 ALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 49/115 (42%), Gaps = 15/115 (13%)
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKST---G 717
A + Q L LH N I+ DL NI LK I KVID S
Sbjct: 204 KFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGI------KVIDFGSSCYEHQ 254
Query: 718 SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAV---NQGNELA 769
+ T S Y PE R M +++S G IL ELLTG + ++G++LA
Sbjct: 255 RVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLA 309
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 48/115 (41%), Gaps = 15/115 (13%)
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
A + Q L LH N I+ DL NI LK I KVID S
Sbjct: 204 KFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGI------KVIDFGSSCYEHQ 254
Query: 721 TVAGSVG---YIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAV---NQGNELA 769
V + Y PE R M +++S G IL ELLTG + ++G++LA
Sbjct: 255 RVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLA 309
>pdb|3UL8|A Chain A, Crystal Structure Of The Tv3 Mutant V134l
Length = 279
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 14/146 (9%)
Query: 166 VPGGITRFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLS---VNMLEGSLPQNMSPNLVR 222
+P + +NLDLS+N L + S P LQ +DLS + +E Q++S +L
Sbjct: 24 IPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLS-HLST 82
Query: 223 LRLGTN----LLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNE 278
L L N L +G + +SL+KL LE + S +G ++L LN+A N
Sbjct: 83 LILTGNPIQSLALGAF--SGLSSLQKLVALETNLASLENF---PIGHLKTLKELNVAHNL 137
Query: 279 LNG-SLPIQLGSLGILQVMNLQLNKL 303
+ LP +L L+ ++L NK+
Sbjct: 138 IQSFKLPEYFSNLTNLEHLDLSSNKI 163
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 70/167 (41%), Gaps = 12/167 (7%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
+E+++L +L + N+ + YL E G LFD + + A+R I
Sbjct: 75 REVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--II 132
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEP---QIGDIELCKVIDPSKSTGSLS 720
V G+ + H N I+ DL N+ L+S + +I D L + SK
Sbjct: 133 RQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKX---K 186
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNE 767
G+ YI PE + +V+S GVIL LL+G N NE
Sbjct: 187 DKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANE 232
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 67/165 (40%), Gaps = 12/165 (7%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S ++E+ +L ++ + NV+T L E G LFD L + +L
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEE 114
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFL--KSLKEPQIG--DIELCKVIDPS 713
+ G+ +LH I DL NI L +++ +P+I D L ID
Sbjct: 115 EATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 171
Query: 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 758
+ G+ ++ PE + + +++S GVI LL+G
Sbjct: 172 ---NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2Z7X|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 58/138 (42%), Gaps = 27/138 (19%)
Query: 165 SVPGGITRFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMSPNLVRLR 224
S+P G+T +++LDLS N++ + DL NLQ + L+ N
Sbjct: 19 SIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNG----------------- 61
Query: 225 LGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELN---- 280
I I +F+SL L +L+L N + + SLT LNL N
Sbjct: 62 ------INTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGE 115
Query: 281 GSLPIQLGSLGILQVMNL 298
SL L L IL+V N+
Sbjct: 116 TSLFSHLTKLQILRVGNM 133
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 37/80 (46%)
Query: 243 EKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNGSLPIQLGSLGILQVMNLQLNK 302
E + L+L NN T + L C +L L L N +N SLG L+ ++L N
Sbjct: 26 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNY 85
Query: 303 LSGEIPSQFSQLKLLSTMNI 322
LS S F L L+ +N+
Sbjct: 86 LSNLSSSWFKPLSSLTFLNL 105
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 67/165 (40%), Gaps = 12/165 (7%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S ++E+ +L ++ + NV+T L E G LFD L + +L
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEE 114
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFL--KSLKEPQIG--DIELCKVIDPS 713
+ G+ +LH I DL NI L +++ +P+I D L ID
Sbjct: 115 EATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 171
Query: 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 758
+ G+ ++ PE + + +++S GVI LL+G
Sbjct: 172 ---NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 106/257 (41%), Gaps = 29/257 (11%)
Query: 80 LEELVLSGNAFHGEIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLD 139
++EL L+ +G +P GI +L + L+AN+ L L + N
Sbjct: 279 VQELDLTAAHLNG-LPSGIEGMNSLKKLVLNANSFDQLCQINAASFPSLRDLYIKGNMRK 337
Query: 140 GRLPT-SLASITTLSRFAANQNKFSGSVPGGIT----RFLRNLDLSYNKLLGVIPIDLLS 194
L T L + L + + + S + R L+ L+LSYN+ LG+
Sbjct: 338 LDLGTRCLEKLENLQKLDLSHSDIEASDCCNLQLKNLRHLQYLNLSYNEPLGLEDQAFKE 397
Query: 195 HPNLQTIDLSVNMLEGSLPQNMSPNLVRLRL--GTNLLIGEIPSATFTSLEKLTYLELDN 252
P L+ +D++ L P + NL LR+ ++ L+ L+ L +L L
Sbjct: 398 CPQLELLDVAFTHLHVKAPHSPFQNLHLLRVLNLSHCLLDTSNQHLLAGLQDLRHLNLQG 457
Query: 253 NSFTGMIPQQLGSCRSLTLLNLAQNELNGSLPIQLGSLGILQVMNLQLNKLSGEIPSQFS 312
NSF Q GS LL + +GSL IL + + L + + F
Sbjct: 458 NSF------QDGSISKTNLLQM------------VGSLEILILSSCNLLSIDQQA---FH 496
Query: 313 QLKLLSTMNISWNSLSG 329
L+ ++ +++S NSL+G
Sbjct: 497 GLRNVNHLDLSHNSLTG 513
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 54/129 (41%), Gaps = 9/129 (6%)
Query: 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
YL EY G LF L D A Y + +A L LH I+ DL N
Sbjct: 97 YLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMA--LGHLH---QKGIIYRDLKPEN 151
Query: 691 IFLKSLKEPQIGDIELCKVIDPSKSTGSLS-TVAGSVGYIPPEYAYTMRVTMAGNVYSFG 749
I L ++ D LCK S G+++ G++ Y+ PE A + +S G
Sbjct: 152 IMLNHQGHVKLTDFGLCK---ESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLG 208
Query: 750 VILLELLTG 758
++ ++LTG
Sbjct: 209 ALMYDMLTG 217
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 37.0 bits (84), Expect = 0.042, Method: Composition-based stats.
Identities = 45/235 (19%), Positives = 89/235 (37%), Gaps = 20/235 (8%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S +F +E +V+ LS+ ++ ++ EY G L + L + +
Sbjct: 47 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE-MRHRFQTQ 105
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG 717
+ V + + +L S L DL+ RN + ++ D L + + + T
Sbjct: 106 QLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 162
Query: 718 SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSA 777
S + V + PPE + + ++++FGV++ E+ + L K
Sbjct: 163 SRGS-KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS----------LGKMPYERFT 211
Query: 778 QQDKLDHILD-FNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831
+ +HI + R LA V + +C + RP K +L +L+
Sbjct: 212 NSETAEHIAQGLRLYRPHLASEK----VYTIMYSCWHEKADERPTFKILLSNILD 262
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 67/165 (40%), Gaps = 12/165 (7%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S ++E+ +L ++ + NV+T L E G LFD L + +L
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEE 114
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFL--KSLKEPQIG--DIELCKVIDPS 713
+ G+ +LH I DL NI L +++ +P+I D L ID
Sbjct: 115 EATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 171
Query: 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 758
+ G+ ++ PE + + +++S GVI LL+G
Sbjct: 172 ---NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 68/168 (40%), Gaps = 9/168 (5%)
Query: 662 IAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLST 721
+A +A G+A+L+ +N + DL+ RN + +IGD + + I +
Sbjct: 137 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGK 193
Query: 722 VAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQG--NELAKWVLRNSAQQ 779
V ++ PE T +V+SFGV+L E+ T QG NE +
Sbjct: 194 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLL 253
Query: 780 DKLDHILD--FNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSV 825
DK D+ D F + R +M ++ S+ E P + V
Sbjct: 254 DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS--SIKEEMEPGFREV 299
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 67/165 (40%), Gaps = 12/165 (7%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S ++E+ +L ++ + NV+T L E G LFD L + +L
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEE 114
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFL--KSLKEPQIG--DIELCKVIDPS 713
+ G+ +LH I DL NI L +++ +P+I D L ID
Sbjct: 115 EATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 171
Query: 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 758
+ G+ ++ PE + + +++S GVI LL+G
Sbjct: 172 ---NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3ULA|A Chain A, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
pdb|3ULA|C Chain C, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
Length = 279
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 14/146 (9%)
Query: 166 VPGGITRFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLS---VNMLEGSLPQNMSPNLVR 222
+P + +NLDLS+N L + S P LQ +DLS + +E Q++S +L
Sbjct: 24 IPDNLPFSTKNLDLSWNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLS-HLST 82
Query: 223 LRLGTN----LLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNE 278
L L N L +G + +SL+KL +E + S +G ++L LN+A N
Sbjct: 83 LILTGNPIQSLALGAF--SGLSSLQKLVAVETNLASLENF---PIGHLKTLKELNVAHNL 137
Query: 279 LNG-SLPIQLGSLGILQVMNLQLNKL 303
+ LP +L L+ ++L NK+
Sbjct: 138 IQSFKLPEYFSNLTNLEHLDLSSNKI 163
>pdb|3UL7|A Chain A, Crystal Structure Of The Tv3 Mutant F63w
Length = 278
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 14/146 (9%)
Query: 166 VPGGITRFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLS---VNMLEGSLPQNMSPNLVR 222
+P + +NLDLS+N L + S P LQ +DLS + +E Q++S +L
Sbjct: 23 IPDNLPFSTKNLDLSWNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLS-HLST 81
Query: 223 LRLGTN----LLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNE 278
L L N L +G + +SL+KL +E + S +G ++L LN+A N
Sbjct: 82 LILTGNPIQSLALGAF--SGLSSLQKLVAVETNLASLENF---PIGHLKTLKELNVAHNL 136
Query: 279 LNG-SLPIQLGSLGILQVMNLQLNKL 303
+ LP +L L+ ++L NK+
Sbjct: 137 IQSFKLPEYFSNLTNLEHLDLSSNKI 162
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 67/165 (40%), Gaps = 12/165 (7%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S ++E+ +L ++ + NV+T L E G LFD L + +L
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEE 114
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFL--KSLKEPQIG--DIELCKVIDPS 713
+ G+ +LH I DL NI L +++ +P+I D L ID
Sbjct: 115 EATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 171
Query: 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 758
+ G+ ++ PE + + +++S GVI LL+G
Sbjct: 172 ---NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 37.0 bits (84), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 67/165 (40%), Gaps = 12/165 (7%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S ++E+ +L ++ + NV+T L E G LFD L + +L
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEE 114
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFL--KSLKEPQIG--DIELCKVIDPS 713
+ G+ +LH I DL NI L +++ +P+I D L ID
Sbjct: 115 EATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 171
Query: 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 758
+ G+ ++ PE + + +++S GVI LL+G
Sbjct: 172 ---NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 67/157 (42%), Gaps = 8/157 (5%)
Query: 605 ELEVLGKLSNSNVMTPLAYVL--ASDSAYLFYEYAPKGTLFDVL-HGCLENA-LDWASRY 660
E+ +L +L + N++ ++ + + Y+ EY G L V+ G E LD
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 661 SIAVGVAQGLAFLHGFTS--NPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGS 718
+ + L H + + +L DL N+FL + ++GD L ++++ T
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN--HDTSF 172
Query: 719 LSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLEL 755
G+ Y+ PE M +++S G +L EL
Sbjct: 173 AKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3UL9|A Chain A, Structure Of The Tv3 Mutant M41e
Length = 278
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 14/146 (9%)
Query: 166 VPGGITRFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLS---VNMLEGSLPQNMSPNLVR 222
+P + +NLDLS+N L + S P LQ +DLS + +E Q++S +L
Sbjct: 23 IPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLS-HLST 81
Query: 223 LRLGTN----LLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNE 278
L L N L +G + +SL+KL +E + S +G ++L LN+A N
Sbjct: 82 LILTGNPIQSLALGAF--SGLSSLQKLVAVETNLASLENF---PIGHLKTLKELNVAHNL 136
Query: 279 LNG-SLPIQLGSLGILQVMNLQLNKL 303
+ LP +L L+ ++L NK+
Sbjct: 137 IQSFKLPEYFSNLTNLEHLDLSSNKI 162
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 67/165 (40%), Gaps = 12/165 (7%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S ++E+ +L ++ + NV+T L E G LFD L + +L
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEE 114
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFL--KSLKEPQIG--DIELCKVIDPS 713
+ G+ +LH I DL NI L +++ +P+I D L ID
Sbjct: 115 EATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 171
Query: 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 758
+ G+ ++ PE + + +++S GVI LL+G
Sbjct: 172 ---NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2Z62|A Chain A, Crystal Structure Of The Tv3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z65|A Chain A, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
pdb|2Z65|B Chain B, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
Length = 276
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 14/146 (9%)
Query: 166 VPGGITRFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLS---VNMLEGSLPQNMSPNLVR 222
+P + +NLDLS+N L + S P LQ +DLS + +E Q++S +L
Sbjct: 22 IPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLS-HLST 80
Query: 223 LRLGTN----LLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNE 278
L L N L +G + +SL+KL +E + S +G ++L LN+A N
Sbjct: 81 LILTGNPIQSLALGAF--SGLSSLQKLVAVETNLASLENF---PIGHLKTLKELNVAHNL 135
Query: 279 LNG-SLPIQLGSLGILQVMNLQLNKL 303
+ LP +L L+ ++L NK+
Sbjct: 136 IQSFKLPEYFSNLTNLEHLDLSSNKI 161
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 67/165 (40%), Gaps = 12/165 (7%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S ++E+ +L ++ + NV+T L E G LFD L + +L
Sbjct: 56 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEE 113
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFL--KSLKEPQIG--DIELCKVIDPS 713
+ G+ +LH I DL NI L +++ +P+I D L ID
Sbjct: 114 EATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 170
Query: 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 758
+ G+ ++ PE + + +++S GVI LL+G
Sbjct: 171 ---NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 31/162 (19%), Positives = 70/162 (43%), Gaps = 7/162 (4%)
Query: 599 HHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWAS 658
+F E ++G+ + N++ V S + E+ G L D +
Sbjct: 59 RREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGAL-DSFLRLNDGQFTVIQ 117
Query: 659 RYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGS 718
+ G+A G+ +L + + DL+ RNI + S ++ D L + ++ + S +
Sbjct: 118 LVGMLRGIASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPT 174
Query: 719 LSTVAGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
++ G + + PE + T A + +S+G+++ E+++
Sbjct: 175 YTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 67/165 (40%), Gaps = 12/165 (7%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S ++E+ +L ++ + NV+T L E G LFD L + +L
Sbjct: 56 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEE 113
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFL--KSLKEPQIG--DIELCKVIDPS 713
+ G+ +LH I DL NI L +++ +P+I D L ID
Sbjct: 114 EATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-- 168
Query: 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 758
+ G+ ++ PE + + +++S GVI LL+G
Sbjct: 169 -FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 67/165 (40%), Gaps = 12/165 (7%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S ++E+ +L ++ + NV+T L E G LFD L + +L
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEE 114
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFL--KSLKEPQIG--DIELCKVIDPS 713
+ G+ +LH I DL NI L +++ +P+I D L ID
Sbjct: 115 EATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 171
Query: 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 758
+ G+ ++ PE + + +++S GVI LL+G
Sbjct: 172 ---NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 67/165 (40%), Gaps = 12/165 (7%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S ++E+ +L ++ + NV+T L E G LFD L + +L
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEE 114
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFL--KSLKEPQIG--DIELCKVIDPS 713
+ G+ +LH I DL NI L +++ +P+I D L ID
Sbjct: 115 EATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 171
Query: 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 758
+ G+ ++ PE + + +++S GVI LL+G
Sbjct: 172 ---NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 67/165 (40%), Gaps = 12/165 (7%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S ++E+ +L ++ + NV+T L E G LFD L + +L
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEE 114
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFL--KSLKEPQIG--DIELCKVIDPS 713
+ G+ +LH I DL NI L +++ +P+I D L ID
Sbjct: 115 EATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 171
Query: 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 758
+ G+ ++ PE + + +++S GVI LL+G
Sbjct: 172 ---NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 36.6 bits (83), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 5/118 (4%)
Query: 165 SVPGGITRFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMSPNLVRLR 224
+VP GI R LDL N++ + + S P+L+ ++L+ N++ P + NL LR
Sbjct: 25 AVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFN-NLFNLR 83
Query: 225 ---LGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNEL 279
L +N L IP FT L LT L++ N ++ +L L + N+L
Sbjct: 84 TLGLRSNRL-KLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDL 140
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 61/151 (40%), Gaps = 11/151 (7%)
Query: 632 LFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNI 691
+ YE+ G LF+ + N + V +GL +H N + LDL NI
Sbjct: 125 MIYEFMSGGELFEKV-ADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENI 180
Query: 692 FL--KSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFG 749
K E ++ D L +DP +S + G+ + PE A V +++S G
Sbjct: 181 MFTTKRSNELKLIDFGLTAHLDPKQS---VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVG 237
Query: 750 VILLELLTGKTAVNQGNELAKWVLRNSAQQD 780
V+ LL+G + G E LRN D
Sbjct: 238 VLSYILLSGLSPF--GGENDDETLRNVKSCD 266
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 36.6 bits (83), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 84/199 (42%), Gaps = 16/199 (8%)
Query: 565 KTRFSTYYKAVMPS-GMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAY 623
K FS + V + G+ + K +N K K ++E + KL + N++
Sbjct: 39 KGAFSVVRRCVHKTTGLEFAAKIIN--TKKLSARDFQKLEREARICRKLQHPNIVRLHDS 96
Query: 624 VLASDSAYLFYEYAPKGTLF-DVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPIL 682
+ YL ++ G LF D++ A ++ S + + Q L + SN I+
Sbjct: 97 IQEESFHYLVFDLVTGGELFEDIV------AREFYSEADASHCIQQILESIAYCHSNGIV 150
Query: 683 LLDLSTRNIFLKSLKEP---QIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRV 739
+L N+ L S + ++ D L ++ S++ AG+ GY+ PE
Sbjct: 151 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF---AGTPGYLSPEVLKKDPY 207
Query: 740 TMAGNVYSFGVILLELLTG 758
+ ++++ GVIL LL G
Sbjct: 208 SKPVDIWACGVILYILLVG 226
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 36.6 bits (83), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 10/128 (7%)
Query: 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
Y+ EYAP G +F L + A Y A + +LH S ++ DL N
Sbjct: 117 YMVMEYAPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLKPEN 171
Query: 691 IFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGV 750
+ + Q+ D L K + G + G+ Y+ PE + A + ++ GV
Sbjct: 172 LMIDQQGYIQVTDFGLAKRV-----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 751 ILLELLTG 758
++ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 31/162 (19%), Positives = 70/162 (43%), Gaps = 7/162 (4%)
Query: 599 HHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWAS 658
+F E ++G+ + N++ V S + E+ G L D +
Sbjct: 61 RREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGAL-DSFLRLNDGQFTVIQ 119
Query: 659 RYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGS 718
+ G+A G+ +L + + DL+ RNI + S ++ D L + ++ + S +
Sbjct: 120 LVGMLRGIASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPT 176
Query: 719 LSTVAGS---VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
++ G + + PE + T A + +S+G+++ E+++
Sbjct: 177 ETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 67/168 (39%), Gaps = 20/168 (11%)
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
+A +A G+A+L+ +N + DL+ RN + +IGD + + I +
Sbjct: 129 QMAGEIADGMAYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGG 185
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQG--NELAKWVLRNSAQ 778
V ++ PE T +V+SFGV+L E+ T QG NE +
Sbjct: 186 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL 245
Query: 779 QDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVL 826
DK D+ D +L++ C +P+ RP ++
Sbjct: 246 LDKPDNCPDM---------------LLELMRMCWQYNPKMRPSFLEII 278
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 70/180 (38%), Gaps = 15/180 (8%)
Query: 600 HKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVL--HGCLENALDWA 657
K +E+ + L++ N++ + + YL EYA G +FD L HG + A
Sbjct: 58 QKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARA 117
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG 717
I V + H I+ DL N+ L + +I D +
Sbjct: 118 KFRQIVSAV----QYCH---QKFIVHRDLKAENLLLDADXNIKIADFGFS---NEFTFGN 167
Query: 718 SLSTVAGSVGYIPPEYAYTMRVTMAG-NVYSFGVILLELLTGKTAVNQGN--ELAKWVLR 774
L G+ Y PE + +V+S GVIL L++G + N EL + VLR
Sbjct: 168 KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 227
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 36.2 bits (82), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 61/151 (40%), Gaps = 11/151 (7%)
Query: 632 LFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNI 691
+ YE+ G LF+ + N + V +GL +H N + LDL NI
Sbjct: 231 MIYEFMSGGELFEKV-ADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENI 286
Query: 692 FL--KSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFG 749
K E ++ D L +DP +S + G+ + PE A V +++S G
Sbjct: 287 MFTTKRSNELKLIDFGLTAHLDPKQS---VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVG 343
Query: 750 VILLELLTGKTAVNQGNELAKWVLRNSAQQD 780
V+ LL+G + G E LRN D
Sbjct: 344 VLSYILLSGLSPF--GGENDDETLRNVKSCD 372
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 36.2 bits (82), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 68/169 (40%), Gaps = 9/169 (5%)
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
+A +A G+A+L+ +N + DL+ RN + +IGD + + I +
Sbjct: 129 QMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 185
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQG--NELAKWVLRNSAQ 778
V ++ PE T +V+SFGV+L E+ T QG NE +
Sbjct: 186 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL 245
Query: 779 QDKLDHILD--FNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSV 825
DK D+ D F + R +M ++ S+ E P + V
Sbjct: 246 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS--SIKEEMEPGFREV 292
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 36.2 bits (82), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 68/165 (41%), Gaps = 12/165 (7%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S + ++E+ +L ++ + NV+T L E G LFD L + +L
Sbjct: 58 SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEE 115
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFL--KSLKEPQIG--DIELCKVIDPS 713
S + G+ +LH + I DL NI L K++ P I D L I+
Sbjct: 116 EATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 758
+ G+ ++ PE + + +++S GVI LL+G
Sbjct: 173 ---VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 36.2 bits (82), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 68/169 (40%), Gaps = 9/169 (5%)
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
+A +A G+A+L+ +N + DL+ RN + +IGD + + I +
Sbjct: 164 QMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 220
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQG--NELAKWVLRNSAQ 778
V ++ PE T +V+SFGV+L E+ T QG NE +
Sbjct: 221 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL 280
Query: 779 QDKLDHILD--FNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSV 825
DK D+ D F + R +M ++ S+ E P + V
Sbjct: 281 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS--SIKEEMEPGFREV 327
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 36.2 bits (82), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 76/184 (41%), Gaps = 13/184 (7%)
Query: 576 MPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSA-YLFY 634
M +G Y +K L+ K+ +L E +L + N +T L + +S Y+
Sbjct: 64 METGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAV-NFPFLTKLEFSFKDNSNLYMVM 121
Query: 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLK 694
EYAP G +F L + A Y A + +LH LDL R++ +
Sbjct: 122 EYAPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEYLHS--------LDLIYRDLKPE 171
Query: 695 SLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLE 754
+L Q G I++ + G + G+ Y+ PE + A + ++ GV++ E
Sbjct: 172 NLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 755 LLTG 758
+ G
Sbjct: 232 MAAG 235
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 36.2 bits (82), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 68/165 (41%), Gaps = 12/165 (7%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S + ++E+ +L ++ + NV+T L E G LFD L + +L
Sbjct: 58 SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEE 115
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFL--KSLKEPQIG--DIELCKVIDPS 713
S + G+ +LH + I DL NI L K++ P I D L I+
Sbjct: 116 EATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 758
+ G+ ++ PE + + +++S GVI LL+G
Sbjct: 173 ---VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 35.8 bits (81), Expect = 0.089, Method: Composition-based stats.
Identities = 46/182 (25%), Positives = 79/182 (43%), Gaps = 24/182 (13%)
Query: 584 IKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAY--LFYEYAPKGT 641
+K +WS + F++E L S+ NV+ L + + + L + P G+
Sbjct: 41 LKVRDWSTR-----KSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGS 95
Query: 642 LFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLD-LSTRNIFLKSLKEPQ 700
L++VLH +D + A+ A+G AFLH T P++ L++R++ + E
Sbjct: 96 LYNVLHEGTNFVVDQSQAVKFALDXARGXAFLH--TLEPLIPRHALNSRSV---XIDEDX 150
Query: 701 IGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAY-----TMRVTMAGNVYSFGVILLEL 755
I V +S G A ++ PE T R + + +SF V+L EL
Sbjct: 151 TARISXADVKFSFQSPGRXYAPA----WVAPEALQKKPEDTNR--RSADXWSFAVLLWEL 204
Query: 756 LT 757
+T
Sbjct: 205 VT 206
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 68/169 (40%), Gaps = 9/169 (5%)
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
+A +A G+A+L+ +N + DL+ RN + +IGD + + I +
Sbjct: 136 QMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 192
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQG--NELAKWVLRNSAQ 778
V ++ PE T +V+SFGV+L E+ T QG NE +
Sbjct: 193 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL 252
Query: 779 QDKLDHILD--FNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSV 825
DK D+ D F + R +M ++ S+ E P + V
Sbjct: 253 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS--SIKEEMEPGFREV 299
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 68/165 (41%), Gaps = 12/165 (7%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S + ++E+ +L ++ + NV+T L E G LFD L + +L
Sbjct: 58 SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEE 115
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFL--KSLKEPQIG--DIELCKVIDPS 713
S + G+ +LH + I DL NI L K++ P I D L I+
Sbjct: 116 EATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 758
+ G+ ++ PE + + +++S GVI LL+G
Sbjct: 173 ---VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 35.8 bits (81), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
S + VA+G+ FL +S + DL+ RNI L +I D L + I +
Sbjct: 203 SYSFQVARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKG 259
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
+ ++ PE + + +V+S+GV+L E+ +
Sbjct: 260 DTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 35.8 bits (81), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 67/165 (40%), Gaps = 12/165 (7%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S ++E+ +L ++ + NV+T L E G LFD L + +L
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFL--AEKESLTEE 114
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFL--KSLKEPQIG--DIELCKVIDPS 713
+ G+ +LH I DL NI L +++ +P+I D L ID
Sbjct: 115 EATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 171
Query: 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 758
+ G+ ++ PE + + +++S GVI LL+G
Sbjct: 172 ---NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 35.8 bits (81), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 68/165 (41%), Gaps = 12/165 (7%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S + ++E+ +L ++ + NV+T L E G LFD L + +L
Sbjct: 58 SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEE 115
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFL--KSLKEPQIG--DIELCKVIDPS 713
S + G+ +LH + I DL NI L K++ P I D L I+
Sbjct: 116 EATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 758
+ G+ ++ PE + + +++S GVI LL+G
Sbjct: 173 ---VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 35.8 bits (81), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 68/165 (41%), Gaps = 12/165 (7%)
Query: 598 SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWA 657
S + ++E+ +L ++ + NV+T L E G LFD L + +L
Sbjct: 58 SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEE 115
Query: 658 SRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFL--KSLKEPQIG--DIELCKVIDPS 713
S + G+ +LH + I DL NI L K++ P I D L I+
Sbjct: 116 EATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 758
+ G+ ++ PE + + +++S GVI LL+G
Sbjct: 173 ---VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 35.8 bits (81), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 67/157 (42%), Gaps = 8/157 (5%)
Query: 605 ELEVLGKLSNSNVMTPLAYVL--ASDSAYLFYEYAPKGTLFDVL-HGCLENA-LDWASRY 660
E+ +L +L + N++ ++ + + Y+ EY G L V+ G E LD
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 661 SIAVGVAQGLAFLHGFTS--NPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGS 718
+ + L H + + +L DL N+FL + ++GD L ++++ +
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFA- 173
Query: 719 LSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLEL 755
G+ Y+ PE M +++S G +L EL
Sbjct: 174 -KEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2V9T|B Chain B, Complex Between The Second Lrr Domain Of Slit2 And The
First Ig Domain From Robo1
Length = 220
Score = 35.8 bits (81), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 70 LPINLGKTKALEELVLSGNAFHGEIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLE 129
+P NL +T + E+ L N P + Y+ L IDLS N +S PD L L
Sbjct: 26 IPTNLPET--ITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLN 83
Query: 130 VLILSANNLDGRLPTSL 146
L+L N + LP SL
Sbjct: 84 SLVLYGNKIT-ELPKSL 99
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 56/139 (40%), Gaps = 27/139 (19%)
Query: 212 LPQNMSPNLVRLRLGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTL 271
+P N+ + +RL N I IP F+ +KL ++L NN + + P RSL
Sbjct: 26 IPTNLPETITEIRLEQNT-IKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNS 84
Query: 272 LNLAQNELNGSLPIQL-------------------------GSLGILQVMNLQLNKLSGE 306
L L N++ LP L L L +++L NKL
Sbjct: 85 LVLYGNKIT-ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTI 143
Query: 307 IPSQFSQLKLLSTMNISWN 325
FS L+ + TM+++ N
Sbjct: 144 AKGTFSPLRAIQTMHLAQN 162
>pdb|2V9S|A Chain A, Second Lrr Domain Of Human Slit2
pdb|2V9S|B Chain B, Second Lrr Domain Of Human Slit2
pdb|2V9S|C Chain C, Second Lrr Domain Of Human Slit2
pdb|2V9S|D Chain D, Second Lrr Domain Of Human Slit2
Length = 220
Score = 35.8 bits (81), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 70 LPINLGKTKALEELVLSGNAFHGEIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLE 129
+P NL +T + E+ L N P + Y+ L IDLS N +S PD L L
Sbjct: 26 IPTNLPET--ITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLN 83
Query: 130 VLILSANNLDGRLPTSL 146
L+L N + LP SL
Sbjct: 84 SLVLYGNKIT-ELPKSL 99
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 56/139 (40%), Gaps = 27/139 (19%)
Query: 212 LPQNMSPNLVRLRLGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTL 271
+P N+ + +RL N I IP F+ +KL ++L NN + + P RSL
Sbjct: 26 IPTNLPETITEIRLEQNT-IKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNS 84
Query: 272 LNLAQNELNGSLPIQL-------------------------GSLGILQVMNLQLNKLSGE 306
L L N++ LP L L L +++L NKL
Sbjct: 85 LVLYGNKIT-ELPKSLFEGLFSLQLLLLNANKINXLRVDAFQDLHNLNLLSLYDNKLQTI 143
Query: 307 IPSQFSQLKLLSTMNISWN 325
FS L+ + TM+++ N
Sbjct: 144 AKGTFSPLRAIQTMHLAQN 162
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 35.8 bits (81), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 76/184 (41%), Gaps = 13/184 (7%)
Query: 576 MPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSA-YLFY 634
M +G Y +K L+ K+ +L E +L + N +T L + +S Y+
Sbjct: 64 METGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAV-NFPFLTKLEFSFKDNSNLYMVM 121
Query: 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLK 694
EYAP G +F L + A Y A + +LH LDL R++ +
Sbjct: 122 EYAPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEYLHS--------LDLIYRDLKPE 171
Query: 695 SLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLE 754
+L Q G I++ + G + G+ Y+ PE + A + ++ GV++ E
Sbjct: 172 NLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 755 LLTG 758
+ G
Sbjct: 232 MAAG 235
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 35.8 bits (81), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 163 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATR--- 215
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M M +++S G I+ ELLTG+T
Sbjct: 216 -WYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRT 250
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 31/120 (25%)
Query: 93 EIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLDGRLPTSLASITTL 152
+PK ++ + T++++S N +S I LSKL +LI+S N + +
Sbjct: 14 HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRI---------QYLDI 62
Query: 153 SRFAANQNKFSGSVPGGITRFLRNLDLSYNKLLGVIPIDLLSHP--NLQTIDLSVNMLEG 210
S F NQ L LDLS+NKL+ + HP NL+ +DLS N +
Sbjct: 63 SVFKFNQE-------------LEYLDLSHNKLVKIS-----CHPTVNLKHLDLSFNAFDA 104
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 68/169 (40%), Gaps = 9/169 (5%)
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
+A +A G+A+L+ +N + DL+ RN + +IGD + + I +
Sbjct: 142 QMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 198
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQG--NELAKWVLRNSAQ 778
V ++ PE T +V+SFGV+L E+ T QG NE +
Sbjct: 199 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL 258
Query: 779 QDKLDHILD--FNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSV 825
DK D+ D F + R +M ++ S+ E P + V
Sbjct: 259 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS--SIKEEMEPGFREV 305
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 14/146 (9%)
Query: 166 VPGGITRFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLS---VNMLEGSLPQNMSPNLVR 222
+P + +NLDLS+N L + S P LQ +DLS + +E Q++S +L
Sbjct: 46 IPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLS-HLST 104
Query: 223 LRLGTN----LLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNE 278
L L N L +G + +SL+KL +E + S +G ++L LN+A N
Sbjct: 105 LILTGNPIQSLALGAF--SGLSSLQKLVAVETNLASLENF---PIGHLKTLKELNVAHNL 159
Query: 279 LNG-SLPIQLGSLGILQVMNLQLNKL 303
+ LP +L L+ ++L NK+
Sbjct: 160 IQSFKLPEYFSNLTNLEHLDLSSNKI 185
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 29/65 (44%)
Query: 239 FTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNGSLPIQLGSLGILQVMNL 298
FT L LT+L+L + P S SL +LN++ N L LQV++
Sbjct: 490 FTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDY 549
Query: 299 QLNKL 303
LN +
Sbjct: 550 SLNHI 554
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 67/167 (40%), Gaps = 15/167 (8%)
Query: 597 GSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDW 656
G + E+ VL K+ + N++ + + YL + G LFD + +E
Sbjct: 62 GKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRI---VEKGFYT 118
Query: 657 ASRYSIAV-GVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQ---IGDIELCKVIDP 712
S + V + +LH I+ DL N+ S E I D L K+
Sbjct: 119 EKDASTLIRQVLDAVYYLHRMG---IVHRDLKPENLLYYSQDEESKIMISDFGLSKM--- 172
Query: 713 SKSTGS-LSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 758
+ G +ST G+ GY+ PE + A + +S GVI LL G
Sbjct: 173 -EGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 68/169 (40%), Gaps = 9/169 (5%)
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
+A +A G+A+L+ +N + DL+ RN + +IGD + + I +
Sbjct: 133 QMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 189
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQG--NELAKWVLRNSAQ 778
V ++ PE T +V+SFGV+L E+ T QG NE +
Sbjct: 190 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL 249
Query: 779 QDKLDHILD--FNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSV 825
DK D+ D F + R +M ++ S+ E P + V
Sbjct: 250 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS--SIKEEMEPGFREV 296
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCK-VIDPSKSTGSL 719
S + VA+G+ +L + DL+ RN L ++ D L + ++D +
Sbjct: 128 SFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQ 184
Query: 720 STVAG-SVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
A V + E T R T +V+SFGV+L ELLT
Sbjct: 185 HRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 51/128 (39%), Gaps = 10/128 (7%)
Query: 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
Y+ EY P G +F L + A Y A + +LH S ++ DL N
Sbjct: 118 YMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLKPEN 172
Query: 691 IFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGV 750
+ + Q+ D K + G T+ G+ Y+ PE + A + ++ GV
Sbjct: 173 LLIDQQGYIQVTDFGFAKRV-----KGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 751 ILLELLTG 758
++ E+ G
Sbjct: 228 LIYEMAAG 235
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 68/169 (40%), Gaps = 9/169 (5%)
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
+A +A G+A+L+ +N + DL+ RN + +IGD + + I +
Sbjct: 142 QMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 198
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQG--NELAKWVLRNSAQ 778
V ++ PE T +V+SFGV+L E+ T QG NE +
Sbjct: 199 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL 258
Query: 779 QDKLDHILD--FNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSV 825
DK D+ D F + R +M ++ S+ E P + V
Sbjct: 259 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS--SIKEEMEPGFREV 305
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 68/169 (40%), Gaps = 9/169 (5%)
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
+A +A G+A+L+ +N + DL+ RN + +IGD + + I +
Sbjct: 135 QMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 191
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQG--NELAKWVLRNSAQ 778
V ++ PE T +V+SFGV+L E+ T QG NE +
Sbjct: 192 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL 251
Query: 779 QDKLDHILD--FNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSV 825
DK D+ D F + R +M ++ S+ E P + V
Sbjct: 252 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS--SIKEEMEPGFREV 298
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 51/128 (39%), Gaps = 10/128 (7%)
Query: 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
Y+ EY P G +F L + A Y A + +LH S ++ DL N
Sbjct: 103 YMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLKPEN 157
Query: 691 IFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGV 750
+ + Q+ D K + G T+ G+ Y+ PE + A + ++ GV
Sbjct: 158 LLIDQQGYIQVTDFGFAKRV-----KGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGV 212
Query: 751 ILLELLTG 758
++ E+ G
Sbjct: 213 LIYEMAAG 220
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 68/169 (40%), Gaps = 9/169 (5%)
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
+A +A G+A+L+ +N + DL+ RN + +IGD + + I +
Sbjct: 135 QMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 191
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQG--NELAKWVLRNSAQ 778
V ++ PE T +V+SFGV+L E+ T QG NE +
Sbjct: 192 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL 251
Query: 779 QDKLDHILD--FNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSV 825
DK D+ D F + R +M ++ S+ E P + V
Sbjct: 252 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS--SIKEEMEPGFREV 298
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
+A +A G+A+L+ +N + DL+ RN + +IGD + + I +
Sbjct: 132 QMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 188
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQG 765
V ++ PE T +V+SFGV+L E+ T QG
Sbjct: 189 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 233
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 53/128 (41%), Gaps = 10/128 (7%)
Query: 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
Y+ EYAP G +F L + A Y A + +LH LDL R+
Sbjct: 117 YMVMEYAPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEYLHS--------LDLIYRD 166
Query: 691 IFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGV 750
+ ++L Q G I++ + G + G+ Y+ PE + A + ++ GV
Sbjct: 167 LKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 751 ILLELLTG 758
++ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 75/184 (40%), Gaps = 13/184 (7%)
Query: 576 MPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSA-YLFY 634
M +G Y +K L+ K+ +L E +L + N +T L + +S Y+
Sbjct: 64 METGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAV-NFPFLTKLEFSFKDNSNLYMVM 121
Query: 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLK 694
EYAP G +F L A Y A + +LH LDL R++ +
Sbjct: 122 EYAPGGEMFSHLRRIGRFXEPHARFY--AAQIVLTFEYLHS--------LDLIYRDLKPE 171
Query: 695 SLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLE 754
+L Q G I++ + G + G+ Y+ PE + A + ++ GV++ E
Sbjct: 172 NLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 755 LLTG 758
+ G
Sbjct: 232 MAAG 235
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 77/177 (43%), Gaps = 31/177 (17%)
Query: 83 LVLSGNAFHGEIPKGIADYRNLTLIDLSANNLSGSVPDRI-GELSKLEVLILSANNLDGR 141
L L GN H + + NLT + L+ N L S+P+ + +L+ L+ L+L N L
Sbjct: 68 LALGGNKLHD--ISALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQSL 124
Query: 142 LPTSLASITTLSRFAANQNKFSGSVPGGITRFLRNLDLSYNKLLGVIPIDLLSHPNLQTI 201
+T L+ N+ S+P G+ ++KL NL +
Sbjct: 125 PDGVFDKLTNLTYLYLYHNQLQ-SLPKGV----------FDKLT-----------NLTRL 162
Query: 202 DLSVNMLEGSLPQNMSPNLVRLR---LGTNLLIGEIPSATFTSLEKLTYLELDNNSF 255
DL N L+ SLP+ + L +L+ L N L +P F L LT++ L NN +
Sbjct: 163 DLDNNQLQ-SLPEGVFDKLTQLKQLSLNDNQL-KSVPDGVFDRLTSLTHIWLLNNPW 217
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 12/165 (7%)
Query: 174 LRNLDLSYNKLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMSPNLVRLR---LGTNLL 230
+R L L NKL + + L+ NL + L+ N L+ SLP + L L+ L N L
Sbjct: 65 VRYLALGGNKLHDISALKELT--NLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQL 121
Query: 231 IGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNGSLP----IQ 286
+P F L LTYL L +N + +LT L+L N+L SLP +
Sbjct: 122 -QSLPDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQ-SLPEGVFDK 179
Query: 287 LGSLGILQVMNLQLNKLSGEIPSQFSQLKLLSTMNISWNSLSGSI 331
L L L + + QL + + + + L + +N W+ I
Sbjct: 180 LTQLKQLSLNDNQLKSVPDGVFDRLTSLTHIWLLNNPWDCACSDI 224
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 14/146 (9%)
Query: 166 VPGGITRFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLS---VNMLEGSLPQNMSPNLVR 222
+P + +NLDLS+N L + S P LQ +DLS + +E Q++S +L
Sbjct: 22 IPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLS-HLST 80
Query: 223 LRLGTN----LLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNE 278
L L N L +G + +SL+KL +E + S +G ++L LN+A N
Sbjct: 81 LILTGNPIQSLALGAF--SGLSSLQKLVAVETNLASLENF---PIGHLKTLKELNVAHNL 135
Query: 279 LNG-SLPIQLGSLGILQVMNLQLNKL 303
+ LP +L L+ ++L NK+
Sbjct: 136 IQSFKLPEYFSNLTNLEHLDLSSNKI 161
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 29/65 (44%)
Query: 239 FTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNGSLPIQLGSLGILQVMNL 298
FT L LT+L+L + P S SL +LN++ N L LQV++
Sbjct: 466 FTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDY 525
Query: 299 QLNKL 303
LN +
Sbjct: 526 SLNHI 530
Score = 29.6 bits (65), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 85/223 (38%), Gaps = 36/223 (16%)
Query: 228 NLLIGEIPSATFTSLEKLTY-------------------LELDNN--SFTGMIPQQLGSC 266
N G+ P+ SL++LT+ L+L N SF G Q
Sbjct: 313 NCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGT 372
Query: 267 RSLTLLNLAQNELNGSLPIQLGSLGILQVMNLQLNKLSGEIPSQFSQLKLLSTMNISWNS 326
SL L+L+ NG + + LG+ Q+ +L + + S+FS LS N+ +
Sbjct: 373 TSLKYLDLS---FNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFS--VFLSLRNLIYLD 427
Query: 327 LSGSIPSFXXXXXXXXXXXXXXXXXXGS------IPNSITNMRSLIELQLGGNQLSGTIP 380
+S + G+ +P+ T +R+L L L QL P
Sbjct: 428 ISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSP 487
Query: 381 MM---PPRLQIALNLSSNLFEGPIPTTFARLNGLEVLDLSNNR 420
LQ+ LN+S N F + LN L+VLD S N
Sbjct: 488 TAFNSLSSLQV-LNMSHNNFFSLDTFPYKCLNSLQVLDYSLNH 529
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 53/128 (41%), Gaps = 10/128 (7%)
Query: 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
Y+ EYAP G +F L + A Y A + +LH LDL R+
Sbjct: 117 YMVMEYAPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEYLHS--------LDLIYRD 166
Query: 691 IFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGV 750
+ ++L Q G I++ + G + G+ Y+ PE + A + ++ GV
Sbjct: 167 LKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 751 ILLELLTG 758
++ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 53/128 (41%), Gaps = 10/128 (7%)
Query: 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
Y+ EYAP G +F L + A Y A + +LH LDL R+
Sbjct: 118 YMVMEYAPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEYLHS--------LDLIYRD 167
Query: 691 IFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGV 750
+ ++L Q G I++ + G + G+ Y+ PE + A + ++ GV
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 751 ILLELLTG 758
++ E+ G
Sbjct: 228 LIYEMAAG 235
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
+A +A G+A+L+ + + DL+ RN + +IGD + + I +
Sbjct: 131 QMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGG 187
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQG 765
V ++ PE T + +++SFGV+L E+ + QG
Sbjct: 188 KGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQG 232
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 126/331 (38%), Gaps = 69/331 (20%)
Query: 101 YRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQN 160
+ NLT +DLS NNL L L L L NN+ P S ++ L R+ + +
Sbjct: 247 WTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNL-RYLSLKR 305
Query: 161 KFSGSVPGGITRFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMSPNL 220
F+ + L SHPN+ D S L+ NM N
Sbjct: 306 AFTKQ-----------------------SVSLASHPNID--DFSFQWLKYLEYLNMDDNN 340
Query: 221 VRLRLGTNLLIGEIP------SATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNL 274
+ +N G + S TFTSL+ LT N +F + + L LNL
Sbjct: 341 IP-STKSNTFTGLVSLKYLSLSKTFTSLQTLT-----NETFVSL------AHSPLLTLNL 388
Query: 275 AQNELNGSLPIQLGSLGILQVMNLQLNKLSGEIPSQ-FSQLKLLSTMNISWNS-LSGSIP 332
+N ++ LG L++++L LN++ ++ Q + L+ + + +S+N L S
Sbjct: 389 TKNHISKIANGTFSWLGQLRILDLGLNEIEQKLSGQEWRGLRNIFEIYLSYNKYLQLSTS 448
Query: 333 SFXXXXXXXXXXXXXXXXXXGSI-PNSITNMRSLIELQLGGNQLSGTIPMMPPRLQIALN 391
SF I P+ +R+L L L N ++ N
Sbjct: 449 SFALVPSLQRLMLRRVALKNVDISPSPFRPLRNLTILDLSNNNIA--------------N 494
Query: 392 LSSNLFEGPIPTTFARLNGLEVLDLSNNRFS 422
++ +L EG L LE+LD +N +
Sbjct: 495 INEDLLEG--------LENLEILDFQHNNLA 517
Score = 32.7 bits (73), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 95 PKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNL 138
P RNLT++DLS NN++ D + L LE+L NNL
Sbjct: 473 PSPFRPLRNLTILDLSNNNIANINEDLLEGLENLEILDFQHNNL 516
Score = 29.6 bits (65), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 45/120 (37%), Gaps = 2/120 (1%)
Query: 259 IPQQLGSCRSLTLLNLAQNELNGSLPIQLGSLGILQVMNLQLNKLSGEIPSQFSQLKLLS 318
IP L S ++T+LNL N+L P L +++ N +S P L LL
Sbjct: 19 IPDDLPS--NITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLK 76
Query: 319 TMNISWNSLSGSIPSFXXXXXXXXXXXXXXXXXXGSIPNSITNMRSLIELQLGGNQLSGT 378
+N+ N LS N N ++LI+L L N LS T
Sbjct: 77 VLNLQHNELSQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSST 136
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
+A +A G+A+L+ + + DL+ RN + +IGD + + I +
Sbjct: 134 QMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGG 190
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQG 765
V ++ PE T + +++SFGV+L E+ + QG
Sbjct: 191 KGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQG 235
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 52/128 (40%), Gaps = 10/128 (7%)
Query: 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
Y+ EYAP G +F L + A Y A + +LH S ++ DL N
Sbjct: 117 YMVMEYAPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLKPEN 171
Query: 691 IFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGV 750
+ + ++ D L K + G + G+ Y+ PE + A + ++ GV
Sbjct: 172 LMIDQQGYIKVTDFGLAKRV-----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 751 ILLELLTG 758
++ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 140 ILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTD-DEMTGYVATR--- 192
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 193 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 136 ILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTD-DEMTGYVATR--- 188
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 189 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
+A +A G+A+L+ + + DL+ RN + +IGD + + I +
Sbjct: 134 QMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGG 190
Query: 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQG 765
V ++ PE T + +++SFGV+L E+ + QG
Sbjct: 191 KGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQG 235
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTD-DEMTGYVATR--- 186
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 145 ILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTD-DEMTGYVATR--- 197
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 198 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 232
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 139 ILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTD-DEMTGYVATR--- 191
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 192 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 139 ILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTD-DEMTGYVATR--- 191
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 192 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLARHTD-DEMTGYVATR--- 186
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 79/167 (47%), Gaps = 13/167 (7%)
Query: 122 IGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQNKFSGSVPGGITRFLRNLDLSY 181
I L+ L L L+ N ++ P LAS+T+L F A N+ + P L +L +
Sbjct: 173 IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITPVANXTRLNSLKIGN 230
Query: 182 NKLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMSPNLVRLR---LGTNLLIGEIPSAT 238
NK+ + P+ LS L +++ N + N +L +L+ +G+N I +I +
Sbjct: 231 NKITDLSPLANLSQ--LTWLEIGTNQISDI---NAVKDLTKLKXLNVGSN-QISDI--SV 282
Query: 239 FTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNGSLPI 285
+L +L L L+NN + +G +LT L L+QN + P+
Sbjct: 283 LNNLSQLNSLFLNNNQLGNEDXEVIGGLTNLTTLFLSQNHITDIRPL 329
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 14/198 (7%)
Query: 565 KTRFSTYYKAVMPS-GMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAY 623
K FS + V + G+ + K +N K K ++E + KL + N++
Sbjct: 16 KGAFSVVRRCVHKTTGLEFAAKIIN--TKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 624 VLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILL 683
+ YL ++ G LF+ + A ++ S + + Q L + SN I+
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDI-----VAREFYSEADASHCIQQILESIAYCHSNGIVH 128
Query: 684 LDLSTRNIFLKSLKE---PQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVT 740
+L N+ L S + ++ D L ++ S++ AG+ GY+ PE +
Sbjct: 129 RNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF---AGTPGYLSPEVLKKDPYS 185
Query: 741 MAGNVYSFGVILLELLTG 758
++++ GVIL LL G
Sbjct: 186 KPVDIWACGVILYILLVG 203
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 14/198 (7%)
Query: 565 KTRFSTYYKAVMPS-GMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAY 623
K FS + V + G+ + K +N K K ++E + KL + N++
Sbjct: 15 KGAFSVVRRCVHKTTGLEFAAKIIN--TKKLSARDFQKLEREARICRKLQHPNIVRLHDS 72
Query: 624 VLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILL 683
+ YL ++ G LF+ + A ++ S + + Q L + SN I+
Sbjct: 73 IQEESFHYLVFDLVTGGELFEDI-----VAREFYSEADASHCIQQILESIAYCHSNGIVH 127
Query: 684 LDLSTRNIFLKSLKEP---QIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVT 740
+L N+ L S + ++ D L ++ S++ AG+ GY+ PE +
Sbjct: 128 RNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF---AGTPGYLSPEVLKKDPYS 184
Query: 741 MAGNVYSFGVILLELLTG 758
++++ GVIL LL G
Sbjct: 185 KPVDIWACGVILYILLVG 202
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 53/128 (41%), Gaps = 10/128 (7%)
Query: 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
Y+ EYAP G +F L + A Y A + +LH LDL R+
Sbjct: 118 YMVLEYAPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEYLHS--------LDLIYRD 167
Query: 691 IFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGV 750
+ ++L Q G I++ + G + G+ Y+ PE + A + ++ GV
Sbjct: 168 LKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 751 ILLELLTG 758
++ E+ G
Sbjct: 228 LIYEMAAG 235
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 10/128 (7%)
Query: 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
Y+ EYAP G +F L A Y A + +LH LDL R+
Sbjct: 117 YMVMEYAPGGEMFSHLRRIGRFXEPHARFY--AAQIVLTFEYLHS--------LDLIYRD 166
Query: 691 IFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGV 750
+ ++L Q G I++ + G + G+ Y+ PE + A + ++ GV
Sbjct: 167 LKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 751 ILLELLTG 758
++ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGXVATR--- 186
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 56/146 (38%), Gaps = 11/146 (7%)
Query: 614 NSNVMTPLAYVLASDS-AYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAF 672
N + L Y +S Y+ EY P G +F L + A Y A + +
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEY 156
Query: 673 LHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPE 732
LH S ++ DL N+ + Q+ D K + G + G+ Y+ PE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPE 208
Query: 733 YAYTMRVTMAGNVYSFGVILLELLTG 758
+ A + ++ GV++ E+ G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
Length = 455
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 14/144 (9%)
Query: 107 IDLSANNLSGSVPDRIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQNKFSGSV 166
DLS + + + + LE L L+ N ++ + +T L + +QN F GS+
Sbjct: 280 CDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQN-FLGSI 338
Query: 167 PGGITRFLRNLD------LSYNKLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMSPNL 220
+R NLD LSYN + + L PNL+ + L N L+ S+P + L
Sbjct: 339 D---SRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLK-SVPDGIFDRL 394
Query: 221 VRLR---LGTNLLIGEIPSATFTS 241
L+ L TN P + S
Sbjct: 395 TSLQKIWLHTNPWDCSCPRIDYLS 418
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 89/212 (41%), Gaps = 20/212 (9%)
Query: 104 LTLIDLSANNLSGSVPDRIGEL---SKLEVLILSANNLDGRLPTSLASITTLSRFAANQN 160
+T +DLS N S+ R + +K++ LILS + ++ S + F N
Sbjct: 214 ITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNS-------YNMGSSFGHTNFKDPDN 266
Query: 161 -KFSGSVPGGITRFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLS---VNMLEGSLPQNM 216
F G G+ + DLS +K+ ++ +L+ + L+ +N ++ + +
Sbjct: 267 FTFKGLEASGV----KTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGL 322
Query: 217 SPNLVRLRLGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQ 276
+ +L++L L N L G I S F +L+KL L+L N + Q +L L L
Sbjct: 323 T-HLLKLNLSQNFL-GSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDT 380
Query: 277 NELNGSLPIQLGSLGILQVMNLQLNKLSGEIP 308
N+L L LQ + L N P
Sbjct: 381 NQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 104/302 (34%), Gaps = 67/302 (22%)
Query: 83 LVLSGNAFHGEIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLDGRL 142
LV+ N F G +L ++ L N L+ LEVL L+ NLDG +
Sbjct: 68 LVIRNNTFRG--------LSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAV 119
Query: 143 PTS--LASITTLSRFAANQNKFSGSVPGGI---TRFLRNLDLSYNKLLGVIPIDLLS--- 194
+ +T+L N P R LDL++NK+ + DLL+
Sbjct: 120 LSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQG 179
Query: 195 -------------------------------HPNLQTIDLSVNMLEGSLPQNMSPNLVRL 223
+ ++ T+DLS N + S+ + +
Sbjct: 180 KHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGT 239
Query: 224 RLGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSC----------------- 266
++ + +L +S + + DN +F G+ + +C
Sbjct: 240 KIQSLILSNSYNMG--SSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSH 297
Query: 267 -RSLTLLNLAQNELNGSLPIQLGSLGILQVMNLQLNKLSGEIPSQFSQLKLLSTMNISWN 325
L L LAQNE+N L L +NL N L F L L +++S+N
Sbjct: 298 FTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYN 357
Query: 326 SL 327
+
Sbjct: 358 HI 359
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 56/146 (38%), Gaps = 11/146 (7%)
Query: 614 NSNVMTPLAYVLASDS-AYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAF 672
N + L Y +S Y+ EY P G +F L + A Y A + +
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEY 156
Query: 673 LHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPE 732
LH S ++ DL N+ + Q+ D K + G + G+ Y+ PE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPE 208
Query: 733 YAYTMRVTMAGNVYSFGVILLELLTG 758
+ A + ++ GV++ E+ G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 56/146 (38%), Gaps = 11/146 (7%)
Query: 614 NSNVMTPLAYVLASDS-AYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAF 672
N + L Y +S Y+ EY P G +F L + A Y A + +
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEY 156
Query: 673 LHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPE 732
LH S ++ DL N+ + Q+ D K + G + G+ Y+ PE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPE 208
Query: 733 YAYTMRVTMAGNVYSFGVILLELLTG 758
+ A + ++ GV++ E+ G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 34.3 bits (77), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATR--- 186
Query: 726 VGYIPPEYAY-TMRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 187 -WYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 34.3 bits (77), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 140 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATR--- 192
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 193 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 140 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATR--- 192
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 193 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATR--- 186
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 141 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATR--- 193
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 194 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATR--- 186
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 33.9 bits (76), Expect = 0.34, Method: Composition-based stats.
Identities = 43/184 (23%), Positives = 76/184 (41%), Gaps = 14/184 (7%)
Query: 578 SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYA 637
+G +K LN KI L K +E++ L + +++ + ++ EY
Sbjct: 35 TGHKVAVKILN-RQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYV 93
Query: 638 PKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLK 697
G LFD + C ++ + + + + H + ++ DL N+ L +
Sbjct: 94 SGGELFDYI--CKHGRVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHM 148
Query: 698 EPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAG---NVYSFGVILLE 754
+I D L ++ + L T GS Y PE + R+ AG +++S GVIL
Sbjct: 149 NAKIADFGLSNMMSDGE---FLRTSCGSPNYAAPE-VISGRL-YAGPEVDIWSCGVILYA 203
Query: 755 LLTG 758
LL G
Sbjct: 204 LLCG 207
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 140 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATR--- 192
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 193 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 146 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATR--- 198
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 199 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 136 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATR--- 188
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 189 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 154 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATR--- 206
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 207 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATR--- 186
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 144 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATR--- 196
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 197 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 231
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATR--- 186
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 146 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATR--- 198
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 199 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATR--- 186
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 33.9 bits (76), Expect = 0.35, Method: Composition-based stats.
Identities = 46/199 (23%), Positives = 84/199 (42%), Gaps = 16/199 (8%)
Query: 565 KTRFSTYYKAV-MPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAY 623
K FS + V +G+ + K +N K K ++E + KL + N++
Sbjct: 16 KGAFSVVRRCVHKTTGLEFAAKIIN--TKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 624 VLASDSAYLFYEYAPKGTLF-DVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPIL 682
+ YL ++ G LF D++ A ++ S + + Q L + SN I+
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDIV------AREFYSEADASHCIQQILESIAYCHSNGIV 127
Query: 683 LLDLSTRNIFLKSLKEP---QIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRV 739
+L N+ L S + ++ D L ++ S++ AG+ GY+ PE
Sbjct: 128 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF---AGTPGYLSPEVLKKDPY 184
Query: 740 TMAGNVYSFGVILLELLTG 758
+ ++++ GVIL LL G
Sbjct: 185 SKPVDIWACGVILYILLVG 203
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATR--- 186
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 154 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATR--- 206
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 207 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 157 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATR--- 209
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 210 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 244
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 145 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATR--- 197
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 198 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 232
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 153 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATR--- 205
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 206 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 240
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATR--- 186
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 94/235 (40%), Gaps = 29/235 (12%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
+E+ VL + + V L ++ EY G+ D+L LD +I
Sbjct: 74 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE---PGPLDETQIATIL 130
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+ +GL +LH S + D+ N+ L E ++ D + + + + +T
Sbjct: 131 REILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNTFV 185
Query: 724 GSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVL--RNSAQQDK 781
G+ ++ PE +++S G+ +EL G+ ++ + + L +N+
Sbjct: 186 GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPP--- 242
Query: 782 LDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLR---MLLNAR 833
L+ N S+ + + AC++ P RP K +L+ +L NA+
Sbjct: 243 ---TLEGNYSK----------PLKEFVEACLNKEPSFRPTAKELLKHKFILRNAK 284
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 139 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATR--- 191
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 192 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 146 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATR--- 198
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 199 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 133 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATR--- 185
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 186 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATR--- 186
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 130 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATR--- 182
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 183 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 153 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATR--- 205
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 206 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 240
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATR--- 186
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 136 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATR--- 188
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 189 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 130 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATR--- 182
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 183 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 139 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATR--- 191
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 192 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 131 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATR--- 183
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 184 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 218
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 62/161 (38%), Gaps = 14/161 (8%)
Query: 173 FLRNLDLSYN-KLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMSPNLVR-------LR 224
L LDLS N +L V P L T+ L L Q + P L R L
Sbjct: 80 LLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGL-----QELGPGLFRGLAALQYLY 134
Query: 225 LGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNGSLP 284
L N L +P TF L LT+L L N + + + SL L L QN + P
Sbjct: 135 LQDNALQA-LPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHP 193
Query: 285 IQLGSLGILQVMNLQLNKLSGEIPSQFSQLKLLSTMNISWN 325
LG L + L N LS + L+ L + ++ N
Sbjct: 194 HAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 234
Score = 29.3 bits (64), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 1/100 (1%)
Query: 231 IGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQN-ELNGSLPIQLGS 289
I +P+A+F + LT L L +N + L L+L+ N +L P
Sbjct: 43 ISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHG 102
Query: 290 LGILQVMNLQLNKLSGEIPSQFSQLKLLSTMNISWNSLSG 329
LG L ++L L P F L L + + N+L
Sbjct: 103 LGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA 142
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 33.9 bits (76), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 132 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATR--- 184
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 185 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 219
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 33.9 bits (76), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 130 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATR--- 182
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 183 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 33.9 bits (76), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 131 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATR--- 183
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 184 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 218
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 62/161 (38%), Gaps = 14/161 (8%)
Query: 173 FLRNLDLSYN-KLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMSPNLVR-------LR 224
L LDLS N +L V P L T+ L L Q + P L R L
Sbjct: 81 LLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGL-----QELGPGLFRGLAALQYLY 135
Query: 225 LGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNGSLP 284
L N L +P TF L LT+L L N + + + SL L L QN + P
Sbjct: 136 LQDNALQA-LPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHP 194
Query: 285 IQLGSLGILQVMNLQLNKLSGEIPSQFSQLKLLSTMNISWN 325
LG L + L N LS + L+ L + ++ N
Sbjct: 195 HAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235
Score = 29.3 bits (64), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 1/100 (1%)
Query: 231 IGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQN-ELNGSLPIQLGS 289
I +P+A+F + LT L L +N + L L+L+ N +L P
Sbjct: 44 ISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHG 103
Query: 290 LGILQVMNLQLNKLSGEIPSQFSQLKLLSTMNISWNSLSG 329
LG L ++L L P F L L + + N+L
Sbjct: 104 LGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA 143
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 79/197 (40%), Gaps = 11/197 (5%)
Query: 565 KTRFSTYYKAV-MPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAY 623
K FS + V + +G Y K +N K H K ++E + L + N++
Sbjct: 32 KGAFSVVRRCVKVLAGQEYAAKIIN--TKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 624 VLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGL-AFLHGFTSNPIL 682
+ YL ++ G LF+ + A ++ S + + Q L A LH ++
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDI-----VAREYYSEADASHCIQQILEAVLHCHQMG-VV 143
Query: 683 LLDLSTRNIFLKS-LKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTM 741
DL N+ L S LK + + I+ + AG+ GY+ PE
Sbjct: 144 HRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGK 203
Query: 742 AGNVYSFGVILLELLTG 758
++++ GVIL LL G
Sbjct: 204 PVDLWACGVILYILLVG 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 136 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATR--- 188
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 189 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 78/189 (41%), Gaps = 18/189 (9%)
Query: 578 SGMSY---FIKKLNWSDKIFQLG-SHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633
+G+ Y FIKK + + G + ++E+ +L ++ + N++T L
Sbjct: 36 TGLEYAAKFIKKRQ--SRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLI 93
Query: 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFL 693
E G LFD L + +L S + G+ +LH + I DL NI L
Sbjct: 94 LELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIML 148
Query: 694 --KSLKEPQIG--DIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFG 749
K++ P I D L I+ + G+ ++ PE + + +++S G
Sbjct: 149 LDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG 205
Query: 750 VILLELLTG 758
VI LL+G
Sbjct: 206 VITYILLSG 214
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLARHTD-DEMTGYVATR--- 186
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 50/128 (39%), Gaps = 10/128 (7%)
Query: 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
Y+ EY P G +F L + A Y A + +LH S ++ DL N
Sbjct: 118 YMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLKPEN 172
Query: 691 IFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGV 750
+ + Q+ D K + G + G+ Y+ PE + A + ++ GV
Sbjct: 173 LLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 751 ILLELLTG 758
++ E+ G
Sbjct: 228 LIYEMAAG 235
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 50/128 (39%), Gaps = 10/128 (7%)
Query: 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
Y+ EY P G +F L + A Y A + +LH S ++ DL N
Sbjct: 117 YMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLKPEN 171
Query: 691 IFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGV 750
+ + Q+ D K + G + G+ Y+ PE + A + ++ GV
Sbjct: 172 LLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 751 ILLELLTG 758
++ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 33.5 bits (75), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLARHTD-DEMTGYVATR--- 186
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 50/128 (39%), Gaps = 10/128 (7%)
Query: 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
Y+ EY P G +F L + A Y A + +LH S ++ DL N
Sbjct: 118 YMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLKPEN 172
Query: 691 IFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGV 750
+ + Q+ D K + G + G+ Y+ PE + A + ++ GV
Sbjct: 173 LLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 751 ILLELLTG 758
++ E+ G
Sbjct: 228 LIYEMAAG 235
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 50/128 (39%), Gaps = 10/128 (7%)
Query: 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
Y+ EY P G +F L + A Y A + +LH S ++ DL N
Sbjct: 117 YMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLKPEN 171
Query: 691 IFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGV 750
+ + Q+ D K + G + G+ Y+ PE + A + ++ GV
Sbjct: 172 LLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 751 ILLELLTG 758
++ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 50/128 (39%), Gaps = 10/128 (7%)
Query: 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
Y+ EY P G +F L + A Y A + +LH S ++ DL N
Sbjct: 118 YMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLKPEN 172
Query: 691 IFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGV 750
+ + Q+ D K + G + G+ Y+ PE + A + ++ GV
Sbjct: 173 LLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 751 ILLELLTG 758
++ E+ G
Sbjct: 228 LIYEMAAG 235
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 63/156 (40%), Gaps = 8/156 (5%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
+E+ VL + + V L ++ EY G+ D+L LD +I
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE---PGPLDETQIATIL 110
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+ +GL +LH S + D+ N+ L E ++ D + + + + +T
Sbjct: 111 REILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNTFV 165
Query: 724 GSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGK 759
G+ ++ PE +++S G+ +EL G+
Sbjct: 166 GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 33.5 bits (75), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 50/128 (39%), Gaps = 10/128 (7%)
Query: 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
Y+ EY P G +F L + A Y A + +LH S ++ DL N
Sbjct: 110 YMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLKPEN 164
Query: 691 IFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGV 750
+ + Q+ D K + G + G+ Y+ PE + A + ++ GV
Sbjct: 165 LLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 219
Query: 751 ILLELLTG 758
++ E+ G
Sbjct: 220 LIYEMAAG 227
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 33.5 bits (75), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 50/128 (39%), Gaps = 10/128 (7%)
Query: 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
Y+ EY P G +F L + A Y A + +LH S ++ DL N
Sbjct: 117 YMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLKPEN 171
Query: 691 IFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGV 750
+ + Q+ D K + G + G+ Y+ PE + A + ++ GV
Sbjct: 172 LLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 751 ILLELLTG 758
++ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 33.5 bits (75), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 50/128 (39%), Gaps = 10/128 (7%)
Query: 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
Y+ EY P G +F L + A Y A + +LH S ++ DL N
Sbjct: 118 YMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLKPEN 172
Query: 691 IFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGV 750
+ + Q+ D K + G + G+ Y+ PE + A + ++ GV
Sbjct: 173 LLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 751 ILLELLTG 758
++ E+ G
Sbjct: 228 LIYEMAAG 235
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 33.5 bits (75), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 50/128 (39%), Gaps = 10/128 (7%)
Query: 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
Y+ EY P G +F L + A Y A + +LH S ++ DL N
Sbjct: 138 YMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLKPEN 192
Query: 691 IFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGV 750
+ + Q+ D K + G + G+ Y+ PE + A + ++ GV
Sbjct: 193 LLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 247
Query: 751 ILLELLTG 758
++ E+ G
Sbjct: 248 LIYEMAAG 255
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 33.5 bits (75), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 73 NLGKTKALEELVLSGNAFHGEIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLI 132
N+ K L L L+GN+ E+P I + NL ++DLS N L+ S+P +G +L+
Sbjct: 242 NIFKYDFLTRLYLNGNSL-TELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFY 299
Query: 133 LSANNLDGRLPTSLASITTL 152
+N+ LP ++ L
Sbjct: 300 F-FDNMVTTLPWEFGNLCNL 318
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 33.5 bits (75), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 50/124 (40%), Gaps = 32/124 (25%)
Query: 10 LKLLNFSKNELVSLPT--FNGFAGLEVLDFSSNNLNGNINLQFDELVXXXXXXXXXXXXX 67
LK L N+L +LP F+ L VLD +N L + FD LV
Sbjct: 66 LKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVH------------ 113
Query: 68 GFLPINLGKTKALEELVLSGNAFHGEIPKGIADYRNLTLIDLSANNLSGSVP----DRIG 123
L+EL + N E+P+GI +LT + L N L S+P DR+
Sbjct: 114 ------------LKELFMCCNKL-TELPRGIERLTHLTHLALDQNQLK-SIPHGAFDRLS 159
Query: 124 ELSK 127
L+
Sbjct: 160 SLTH 163
>pdb|4ARN|A Chain A, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|B Chain B, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|C Chain C, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|D Chain D, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARR|A Chain A, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor With The Magic Triangle I3c
pdb|4ARR|B Chain B, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor With The Magic Triangle I3c
Length = 279
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 35/90 (38%), Gaps = 2/90 (2%)
Query: 219 NLVRLRLGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNE 278
NL L L N I E+PS F LE L +E +N M G L LNLA N+
Sbjct: 148 NLSHLELRAN--IEEMPSHLFDDLENLESIEFGSNKLRQMPRGIFGKMPKLKQLNLASNQ 205
Query: 279 LNGSLPIQLGSLGILQVMNLQLNKLSGEIP 308
L L LQ + L N P
Sbjct: 206 LKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 235
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 33.1 bits (74), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 70/174 (40%), Gaps = 20/174 (11%)
Query: 590 SDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTL--FDVLH 647
+DKI + F EL+++ + N +T + D Y+ YEY ++ FD
Sbjct: 78 NDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYF 137
Query: 648 GCLENALDWASRYSIAV------GVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQI 701
L+ ++ I V V +++H I D+ NI + ++
Sbjct: 138 FVLDK--NYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKL 193
Query: 702 GDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAG---NVYSFGVIL 752
D + + K GS G+ ++PPE+ ++ + G +++S G+ L
Sbjct: 194 SDFGESEYMVDKKIKGS----RGTYEFMPPEF-FSNESSYNGAKVDIWSLGICL 242
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 33.1 bits (74), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA-G 724
V+ G+ +L SN + DL+ RN+ L + +I D L K + ++ T
Sbjct: 136 VSMGMKYLE--ESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 192
Query: 725 SVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
V + PE + + +V+SFGV++ E +
Sbjct: 193 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 33.1 bits (74), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA-G 724
V+ G+ +L SN + DL+ RN+ L + +I D L K + ++ T
Sbjct: 136 VSMGMKYLE--ESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 192
Query: 725 SVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
V + PE + + +V+SFGV++ E +
Sbjct: 193 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 33.1 bits (74), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA-G 724
V+ G+ +L SN + DL+ RN+ L + +I D L K + ++ T
Sbjct: 134 VSMGMKYLE--ESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 190
Query: 725 SVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
V + PE + + +V+SFGV++ E +
Sbjct: 191 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 33.1 bits (74), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D ++ +
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----DEMAGFVAT 185
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 33.1 bits (74), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA-G 724
V+ G+ +L SN + DL+ RN+ L + +I D L K + ++ T
Sbjct: 126 VSMGMKYLE--ESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 182
Query: 725 SVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
V + PE + + +V+SFGV++ E +
Sbjct: 183 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 33.1 bits (74), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 49/128 (38%), Gaps = 10/128 (7%)
Query: 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
Y+ EY P G +F L A Y A + +LH S ++ DL N
Sbjct: 117 YMVMEYVPGGEMFSHLRRIGRFXEPHARFY--AAQIVLTFEYLH---SLDLIYRDLKPEN 171
Query: 691 IFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGV 750
+ + Q+ D K + G + G+ Y+ PE + A + ++ GV
Sbjct: 172 LLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 751 ILLELLTG 758
++ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 33.1 bits (74), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 51/128 (39%), Gaps = 10/128 (7%)
Query: 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
Y+ EY G +F L + A Y A + +LH S ++ DL N
Sbjct: 138 YMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLKPEN 192
Query: 691 IFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGV 750
+ + Q+ D K + G+ T+ G+ Y+ PE + A + ++ GV
Sbjct: 193 LLIDQQGYIQVTDFGFAKRV-----KGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGV 247
Query: 751 ILLELLTG 758
++ E+ G
Sbjct: 248 LIYEMAAG 255
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 33.1 bits (74), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAG- 724
V+ G+ +L SN + DL+ RN+ L + +I D L K + ++ T
Sbjct: 478 VSMGMKYLE--ESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 534
Query: 725 SVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
V + PE + + +V+SFGV++ E +
Sbjct: 535 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 33.1 bits (74), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 49/128 (38%), Gaps = 10/128 (7%)
Query: 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
Y+ EY P G +F L A Y A + +LH S ++ DL N
Sbjct: 118 YMVMEYVPGGEMFSHLRRIGRFXEPHARFY--AAQIVLTFEYLH---SLDLIYRDLKPEN 172
Query: 691 IFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGV 750
+ + Q+ D K + G + G+ Y+ PE + A + ++ GV
Sbjct: 173 LLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 751 ILLELLTG 758
++ E+ G
Sbjct: 228 LIYEMAAG 235
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 33.1 bits (74), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 49/128 (38%), Gaps = 10/128 (7%)
Query: 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
Y+ EY P G +F L A Y A + +LH S ++ DL N
Sbjct: 117 YMVMEYVPGGEMFSHLRRIGRFXEPHARFY--AAQIVLTFEYLH---SLDLIYRDLKPEN 171
Query: 691 IFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGV 750
+ + Q+ D K + G + G+ Y+ PE + A + ++ GV
Sbjct: 172 LLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 751 ILLELLTG 758
++ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 33.1 bits (74), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLARHTD-DEMTGYVATR--- 186
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 33.1 bits (74), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D ++ +
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----DEMAGFVAT 185
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAG- 724
V+ G+ +L SN + DL+ RN+ L + +I D L K + ++ T
Sbjct: 479 VSMGMKYLE--ESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 535
Query: 725 SVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
V + PE + + +V+SFGV++ E +
Sbjct: 536 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 30/156 (19%), Positives = 63/156 (40%), Gaps = 8/156 (5%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
+E+ VL + +S V L ++ EY G+ D+L D ++
Sbjct: 70 QEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRA---GPFDEFQIATML 126
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+ +GL +LH S + D+ N+ L + ++ D + + + + +T
Sbjct: 127 KEILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQL--TDTQIKRNTFV 181
Query: 724 GSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGK 759
G+ ++ PE +++S G+ +EL G+
Sbjct: 182 GTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 217
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 49/128 (38%), Gaps = 10/128 (7%)
Query: 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
Y+ EY P G +F L A Y A + +LH S ++ DL N
Sbjct: 110 YMVMEYVPGGEMFSHLRRIGRFXEPHARFY--AAQIVLTFEYLH---SLDLIYRDLKPEN 164
Query: 691 IFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGV 750
+ + Q+ D K + G + G+ Y+ PE + A + ++ GV
Sbjct: 165 LLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 219
Query: 751 ILLELLTG 758
++ E+ G
Sbjct: 220 LIYEMAAG 227
>pdb|3O53|A Chain A, Crystal Structure Of Lrim1 Leucine-Rich Repeat Domain
pdb|3O53|B Chain B, Crystal Structure Of Lrim1 Leucine-Rich Repeat Domain
Length = 317
Score = 32.7 bits (73), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 99/233 (42%), Gaps = 39/233 (16%)
Query: 79 ALEELVLSGNAFHGE------IPKGIADYR----NLTLIDLSANNLSGSVPDRIGELSKL 128
A+ E+ +GN + E + + +A R N+ +DLS N LS + +KL
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKL 60
Query: 129 EVLILSANNLDGRLP-TSLASITTL-----------------SRFAANQNKFSGSVPGGI 170
E+L LS+N L L SL+++ TL + AAN N S G
Sbjct: 61 ELLNLSSNVLYETLDLESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQ 120
Query: 171 TRFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLSVNMLE----GSLPQNMSPNLVRLRLG 226
+ +N+ L+ NK+ + +D +Q +DL +N ++ L + S L L L
Sbjct: 121 GK--KNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAAS-SDTLEHLNLQ 177
Query: 227 TNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNEL 279
N + F KL L+L +N M P + S +T ++L N+L
Sbjct: 178 YNFIYDVKGQVVFA---KLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKL 226
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 26/181 (14%)
Query: 174 LRNLDLSYNKLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMSPNLVRLRLGTN----L 229
++ LDLS N L + DL L+ ++LS N+L +L L L L N L
Sbjct: 36 VKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLDLESLSTLRTLDLNNNYVQEL 95
Query: 230 LIG---EIPSATFTSLEKLTY--------LELDNNSFTGMIPQQLGSCRS-LTLLNLAQN 277
L+G E A ++ +++ + L NN T M+ CRS + L+L N
Sbjct: 96 LVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKIT-MLRDLDEGCRSRVQYLDLKLN 154
Query: 278 ELNGSLPIQL-GSLGILQVMNLQLN---KLSGEIPSQFSQLKLLSTMNISWNSLSGSIPS 333
E++ +L S L+ +NLQ N + G++ F++LK T+++S N L+ P
Sbjct: 155 EIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVV--FAKLK---TLDLSSNKLAFMGPE 209
Query: 334 F 334
F
Sbjct: 210 F 210
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 32.7 bits (73), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 52/128 (40%), Gaps = 10/128 (7%)
Query: 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
Y+ EY P G +F L + A Y A + +LH LDL R+
Sbjct: 117 YMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEYLHS--------LDLIYRD 166
Query: 691 IFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGV 750
+ ++L Q G I++ + G + G+ Y+ PE + A + ++ GV
Sbjct: 167 LKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 751 ILLELLTG 758
++ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 32.7 bits (73), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D ++ +
Sbjct: 130 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----DEMAGFVAT 181
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
pdb|4FHO|B Chain B, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
Length = 231
Score = 32.7 bits (73), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 7/114 (6%)
Query: 172 RFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMSPNLVRLRLGTNLLI 231
+ ++ LDL+ ++ V P+ LS NLQ + L +N + P NL L +G N +
Sbjct: 113 QSIKTLDLTSTQITDVTPLAGLS--NLQVLYLDLNQITNISPLAGLTNLQYLSIGNNQVN 170
Query: 232 GEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNGSLPI 285
P A +L KLT L D+N + + P L S +L ++L N+++ P+
Sbjct: 171 DLTPLA---NLSKLTTLRADDNKISDISP--LASLPNLIEVHLKDNQISDVSPL 219
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 66/164 (40%), Gaps = 15/164 (9%)
Query: 219 NLVRLRLGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNE 278
NL+ L L N + P +L K+T LEL N + + +S+ L+L +
Sbjct: 70 NLIGLELKDNQITDLTP---LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDLTSTQ 124
Query: 279 LNGSLPIQLGSLGILQVMNLQLNKLSGEIP-SQFSQLKLLSTMNISWNSLSGSIPSFXXX 337
+ P L L LQV+ L LN+++ P + + L+ LS N N L+
Sbjct: 125 ITDVTP--LAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNNQVNDLTPLANLSKLT 182
Query: 338 XXXXXXXXXXXXXXXGSIPNSITNMRSLIELQLGGNQLSGTIPM 381
S+PN LIE+ L NQ+S P+
Sbjct: 183 TLRADDNKISDISPLASLPN-------LIEVHLKDNQISDVSPL 219
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 32.7 bits (73), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 76/193 (39%), Gaps = 12/193 (6%)
Query: 1 MQSCGGIDGL---KLLNFSKNELVSLPTFNGFAGLEVLDFSSNNLNGNINLQFDELVXXX 57
++S GI L + L N+L + L L + N L N FD+L
Sbjct: 53 IKSVQGIQYLPNVRYLALGGNKLHDISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLK 112
Query: 58 XXXXXXXXXXGFLPINLGKTKALEELVLSGNAFHGEIPKGIAD-YRNLTLIDLSANNLSG 116
K L L L+ N +PKG+ D NLT +DLS N L
Sbjct: 113 ELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQS-LPKGVFDKLTNLTELDLSYNQLQ- 170
Query: 117 SVPDRI-GELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQNKFSGSVPGGITRFLR 175
S+P+ + +L++L+ L L N L +T+L + N + + PG +R
Sbjct: 171 SLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG-----IR 225
Query: 176 NLDLSYNKLLGVI 188
L NK GV+
Sbjct: 226 YLSEWINKHSGVV 238
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 12/165 (7%)
Query: 174 LRNLDLSYNKLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMSPNLVRLR---LGTNLL 230
+R L L NKL + + L+ NL + L+ N L+ SLP + L L+ L N L
Sbjct: 65 VRYLALGGNKLHDISALKELT--NLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQL 121
Query: 231 IGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNGSLP----IQ 286
+P F L LTYL L +N + +LT L+L+ N+L SLP +
Sbjct: 122 -QSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ-SLPEGVFDK 179
Query: 287 LGSLGILQVMNLQLNKLSGEIPSQFSQLKLLSTMNISWNSLSGSI 331
L L L++ QL + + + + L+ + + W+ I
Sbjct: 180 LTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGI 224
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 32.7 bits (73), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 128/317 (40%), Gaps = 58/317 (18%)
Query: 21 VSLPTFNGFAGLEVLDFSSNNLNGNINLQFDELVXXXXXXXXXXXXXGFLPINLGKTKAL 80
+S TF F L+ LD ++ +L G LP + L
Sbjct: 266 ISSTTFQCFTQLQELDLTATHLKG-------------------------LPSGMKGLNLL 300
Query: 81 EELVLSGNAFHGEIPKGIADYRNLTLIDLSAN----NLSGSVPDRIGELSKLEVLILSAN 136
++LVLS N F A++ +LT + + N +L +++G L L+ LS N
Sbjct: 301 KKLVLSVNHFDQLCQISAANFPSLTHLYIRGNVKKLHLGVGCLEKLGNLQTLD---LSHN 357
Query: 137 NLDGRLPTSLASITTLSRFAANQNKFSGSVPGGITRFLRNLDLSYNKLLGVIPIDLLSHP 196
+++ SL + LS L+ L+LS+N+ LG+ P
Sbjct: 358 DIEASDCCSL-QLKNLSH-------------------LQTLNLSHNEPLGLQSQAFKECP 397
Query: 197 NLQTIDLSVNMLEGSLPQNMSPNLVRLRL--GTNLLIGEIPSATFTSLEKLTYLELDNNS 254
L+ +DL+ L + PQ+ NL L++ T + L L +L L N
Sbjct: 398 QLELLDLAFTRLHINAPQSPFQNLHFLQVLNLTYCFLDTSNQHLLAGLPVLRHLNLKGNH 457
Query: 255 FT-GMIPQQ--LGSCRSLTLLNLAQNELNGSLPIQLGSLGILQVMNLQLNKLSGEIPSQF 311
F G I + L + SL +L L+ L SLG + ++L N L+ +
Sbjct: 458 FQDGTITKTNLLQTVGSLEVLILSSCGLLSIDQQAFHSLGKMSHVDLSHNSLTCDSIDSL 517
Query: 312 SQLKLLSTMNISWNSLS 328
S LK + +N++ NS++
Sbjct: 518 SHLKGI-YLNLAANSIN 533
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 32.7 bits (73), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 67/186 (36%), Gaps = 16/186 (8%)
Query: 129 EVLILSANNLDGRLPTSLASITTLSRFAANQNKFSGSVPGGIT--RFLRNLDLSYNKLLG 186
+ + L N + S S L+ + N +G T L LDLS N L
Sbjct: 34 QRIFLHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLR 93
Query: 187 VI-PIDLLSHPNLQTIDLSVNMLEGSLPQNMSPNLVR-------LRLGTNLLIGEIPSAT 238
V+ P +L T+ L L Q + P L R L L N L +P T
Sbjct: 94 VVDPTTFRGLGHLHTLHLDRCGL-----QELGPGLFRGLAALQYLYLQDNNLQA-LPDNT 147
Query: 239 FTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNGSLPIQLGSLGILQVMNL 298
F L LT+L L N + SL L L QN + P LG L + L
Sbjct: 148 FRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYL 207
Query: 299 QLNKLS 304
N LS
Sbjct: 208 FANNLS 213
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 6/136 (4%)
Query: 245 LTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNGSLPIQL--GSLGILQVMNLQLNK 302
T+L N FT + Q + + L L L +N L + L ++ L+ +++ LN
Sbjct: 355 FTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNS 414
Query: 303 L-SGEIPSQFSQLKLLSTMNISWNSLSGSIPSFXXXXXXXXXXXXXXXXXXGSIPNSITN 361
L S + + + +N+S N L+GS+ SIP +T+
Sbjct: 415 LNSHAYDRTCAWAESILVLNLSSNMLTGSV---FRCLPPKVKVLDLHNNRIMSIPKDVTH 471
Query: 362 MRSLIELQLGGNQLSG 377
+++L EL + NQL
Sbjct: 472 LQALQELNVASNQLKS 487
>pdb|3ZYI|A Chain A, Netring2 In Complex With Ngl2
Length = 452
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 100/250 (40%), Gaps = 45/250 (18%)
Query: 93 EIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLD----GRLPTSLAS 148
E+P+GI N ++L NN+ D L LEVL L N++ G LAS
Sbjct: 68 EVPQGIPS--NTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAF-NGLAS 124
Query: 149 ITTLSRFAANQNKFSGSVPGGITRFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLSVNML 208
+ TL F + + +P G +L L + + L N +
Sbjct: 125 LNTLELF----DNWLTVIPSGAFEYLSKL---------------------RELWLRNNPI 159
Query: 209 EGSLPQ---NMSPNLVRLRLGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGS 265
E S+P N P+L+RL LG + I F L L YL L + M L
Sbjct: 160 E-SIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM--PNLTP 216
Query: 266 CRSLTLLNLAQNELNGSLPIQ---LGSLGILQVMNLQLNKLSGEIPSQFSQLKLLSTMNI 322
L L ++ N P L SL L VMN Q++ + + F L L +N+
Sbjct: 217 LVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIER---NAFDGLASLVELNL 273
Query: 323 SWNSLSGSIP 332
+ N+LS S+P
Sbjct: 274 AHNNLS-SLP 282
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 52/128 (40%), Gaps = 10/128 (7%)
Query: 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
Y+ EY P G +F L + A Y A + +LH LDL R+
Sbjct: 117 YMVMEYMPGGDMFSHLRRIGRFSEPHARFY--AAQIVLTFEYLHS--------LDLIYRD 166
Query: 691 IFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGV 750
+ ++L Q G I++ + G + G+ Y+ PE + A + ++ GV
Sbjct: 167 LKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 751 ILLELLTG 758
++ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + + ++ +
Sbjct: 141 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMTGYVAT 192
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + + ++ +
Sbjct: 141 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMTGYVAT 192
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|3VQ1|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ1|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ2|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
pdb|3VQ2|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
Length = 606
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 77/163 (47%), Gaps = 4/163 (2%)
Query: 171 TRFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMSPNLVRL-RLGTNL 229
T LR+LDLS+N + ++ + + LQ +D + L+ + +L +L L +
Sbjct: 375 TNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISY 433
Query: 230 LIGEIP-SATFTSLEKLTYLELDNNSFT-GMIPQQLGSCRSLTLLNLAQNELNGSLPIQL 287
+I F L L L++ NSF + + +LT L+L++ +L
Sbjct: 434 TNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVF 493
Query: 288 GSLGILQVMNLQLNKLSGEIPSQFSQLKLLSTMNISWNSLSGS 330
+L LQ++N+ N L S ++QL LST++ S+N + S
Sbjct: 494 DTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETS 536
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + +
Sbjct: 157 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----DEMXGYVAT 208
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 209 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 244
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 52/128 (40%), Gaps = 10/128 (7%)
Query: 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
Y+ EY P G +F L + A Y A + +LH LDL R+
Sbjct: 117 YMVMEYMPGGDMFSHLRRIGRFSEPHARFY--AAQIVLTFEYLHS--------LDLIYRD 166
Query: 691 IFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGV 750
+ ++L Q G I++ + G + G+ Y+ PE + A + ++ GV
Sbjct: 167 LKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 751 ILLELLTG 758
++ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + + ++ +
Sbjct: 141 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMTGYVAT 192
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|2Z64|A Chain A, Crystal Structure Of Mouse Tlr4 And Mouse Md-2 Complex
Length = 599
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 77/163 (47%), Gaps = 4/163 (2%)
Query: 171 TRFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMSPNLVRL-RLGTNL 229
T LR+LDLS+N + ++ + + LQ +D + L+ + +L +L L +
Sbjct: 370 TNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISY 428
Query: 230 LIGEIP-SATFTSLEKLTYLELDNNSFT-GMIPQQLGSCRSLTLLNLAQNELNGSLPIQL 287
+I F L L L++ NSF + + +LT L+L++ +L
Sbjct: 429 TNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVF 488
Query: 288 GSLGILQVMNLQLNKLSGEIPSQFSQLKLLSTMNISWNSLSGS 330
+L LQ++N+ N L S ++QL LST++ S+N + S
Sbjct: 489 DTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETS 531
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLARHTD-DEMTGYVATR--- 186
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I D L + D + G ++T
Sbjct: 154 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMXGXVATR--- 206
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 207 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 67/160 (41%), Gaps = 15/160 (9%)
Query: 605 ELEVLGKLSNSNVMTPLAYVLASDSA-YLFYEYAPKGTLFDVLHGCLENALDWASRYSIA 663
E +VL + S + L Y +++ +L +Y G LF L + + + + +
Sbjct: 108 ERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL-----SQRERFTEHEVQ 162
Query: 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVA 723
+ V + + L I+ D+ NI L S + D L K + T
Sbjct: 163 IYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF-VADETERAYDFC 221
Query: 724 GSVGYIPPEYAYTMRVTMAG-----NVYSFGVILLELLTG 758
G++ Y+ P+ +R +G + +S GV++ ELLTG
Sbjct: 222 GTIEYMAPD---IVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|3O6N|A Chain A, Crystal Structure Of Apl1 Leucine-Rich Repeat Domain
Length = 390
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 32/210 (15%)
Query: 222 RLRLGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNG 281
+L +G N I +P F ++ LT L L+ N + + + LT L+++ N L
Sbjct: 97 KLYMGFNA-IRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLER 155
Query: 282 SLPIQLGSLGILQVMNLQLNKLSGE----IPSQFSQLKLLSTMNISWNSLSG-SIPSFXX 336
+ LQ + L N+L+ IPS F N+S+N LS +IP
Sbjct: 156 IEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFH-------ANVSYNLLSTLAIP---- 204
Query: 337 XXXXXXXXXXXXXXXXGSIPNSITNMR-----SLIELQLGGNQLSGTIPMMPPRLQIALN 391
+ NSI +R L L+L N L+ T ++ + ++
Sbjct: 205 ----------IAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDTAWLLNYPGLVEVD 254
Query: 392 LSSNLFEGPIPTTFARLNGLEVLDLSNNRF 421
LS N E + F ++ LE L +SNNR
Sbjct: 255 LSYNELEKIMYHPFVKMQRLERLYISNNRL 284
>pdb|3OJA|A Chain A, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 487
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 99/233 (42%), Gaps = 39/233 (16%)
Query: 79 ALEELVLSGNAFHGE------IPKGIADYR----NLTLIDLSANNLSGSVPDRIGELSKL 128
A+ E+ +GN + E + + +A R N+ +DLS N LS + +KL
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKL 60
Query: 129 EVLILSANNLDGRLP-TSLASITTL-----------------SRFAANQNKFSGSVPGGI 170
E+L LS+N L L SL+++ TL + AAN N S G
Sbjct: 61 ELLNLSSNVLYETLDLESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQ 120
Query: 171 TRFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLSVNMLE----GSLPQNMSPNLVRLRLG 226
+ +N+ L+ NK+ + +D +Q +DL +N ++ L + S L L L
Sbjct: 121 GK--KNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAAS-SDTLEHLNLQ 177
Query: 227 TNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNEL 279
N + F KL L+L +N M P + S +T ++L N+L
Sbjct: 178 YNFIYDVKGQVVFA---KLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKL 226
Score = 29.3 bits (64), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 26/181 (14%)
Query: 174 LRNLDLSYNKLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMSPNLVRLRLGTN----L 229
++ LDLS N L + DL L+ ++LS N+L +L L L L N L
Sbjct: 36 VKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLDLESLSTLRTLDLNNNYVQEL 95
Query: 230 LIG---EIPSATFTSLEKLTY--------LELDNNSFTGMIPQQLGSCRS-LTLLNLAQN 277
L+G E A ++ +++ + L NN T M+ CRS + L+L N
Sbjct: 96 LVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKIT-MLRDLDEGCRSRVQYLDLKLN 154
Query: 278 ELNGSLPIQL-GSLGILQVMNLQLN---KLSGEIPSQFSQLKLLSTMNISWNSLSGSIPS 333
E++ +L S L+ +NLQ N + G++ F++LK T+++S N L+ P
Sbjct: 155 EIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVV--FAKLK---TLDLSSNKLAFMGPE 209
Query: 334 F 334
F
Sbjct: 210 F 210
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 72/171 (42%), Gaps = 31/171 (18%)
Query: 94 IPKGIADYRNLTLIDLSANNLSGSVPDRI-GELSKLEVLILSANNLDGRLPTSLASITTL 152
+P GI T +DL N+L S+P+ + EL+ L L L N L +T+L
Sbjct: 22 VPTGIP--AQTTYLDLETNSLK-SLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSL 78
Query: 153 SRFAANQNKFSGSVPGGITRFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLSVNMLEGSL 212
+ + N+ S+P G+ ++KL L+ + L+ N L+ SL
Sbjct: 79 TYLNLSTNQLQ-SLPNGV----------FDKLT-----------QLKELALNTNQLQ-SL 115
Query: 213 PQNMSPNLVR---LRLGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIP 260
P + L + LRL N L +P F L L Y+ L +N + P
Sbjct: 116 PDGVFDKLTQLKDLRLYQNQL-KSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 62/161 (38%), Gaps = 37/161 (22%)
Query: 10 LKLLNFSKNELVSLP--TFNGFAGLEVLDFSSNNLNGNINLQFDELVXXXXXXXXXXXXX 67
L L N+L SLP FN L L+ S+N L N FD+L
Sbjct: 54 LTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLT------------- 100
Query: 68 GFLPINLGKTKALEELVLSGNAFHGEIPKGIAD-YRNLTLIDLSANNLSGSVPDRI-GEL 125
L+EL L+ N +P G+ D L + L N L SVPD + L
Sbjct: 101 -----------QLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQLK-SVPDGVFDRL 147
Query: 126 SKLEVLILSANNLDGRLPTSLASITTLSRFAANQNKFSGSV 166
+ L+ + L N D P I LS + NK SG V
Sbjct: 148 TSLQYIWLHDNPWDCTCP----GIRYLSEWI---NKHSGVV 181
Score = 30.0 bits (66), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Query: 211 SLPQNMSPNLVRLRLGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLT 270
S+P + L L TN L +P+ F L LT L L N + SLT
Sbjct: 21 SVPTGIPAQTTYLDLETNSL-KSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLT 79
Query: 271 LLNLAQNELNGSLP----IQLGSLGILQVMNLQLNKLSGEIPSQFSQLKLL 317
LNL+ N+L SLP +L L L + QL L + + +QLK L
Sbjct: 80 YLNLSTNQLQ-SLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDL 129
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 50/128 (39%), Gaps = 10/128 (7%)
Query: 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
Y+ EY G +F L + A Y A + +LH S ++ DL N
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLKPEN 171
Query: 691 IFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGV 750
+ + Q+ D K + G +AG+ Y+ PE + A + ++ GV
Sbjct: 172 LLIDQQGYIQVTDFGFAKRV-----KGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 751 ILLELLTG 758
++ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 66/172 (38%), Gaps = 21/172 (12%)
Query: 662 IAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSL---KEPQIGDIELCKVIDPSKSTGS 718
+A +A G +L N + D++ RN L + +IGD + + I +
Sbjct: 160 VARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 216
Query: 719 LSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQ 778
V ++PPE T + +SFGV+L E+ + L + +
Sbjct: 217 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS----------LGYMPYPSKSN 266
Query: 779 QDKLDHILDFNVSRTSL-AVRSQMLTVLKVAVACVSVSPEARPKMKSVLRML 829
Q+ +L+F S + ++ V ++ C PE RP +L +
Sbjct: 267 QE----VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 4/124 (3%)
Query: 211 SLPQNMSPNLVRLRLGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLT 270
S+P + + +L L + L + ATF L KLT+L LD N + L
Sbjct: 28 SVPSGIPADTEKLDLQSTGL-ATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELG 86
Query: 271 LLNLAQNELNGSLPIQL-GSLGILQVMNLQLNKLSGEIPSQFSQLKLLSTMNISWNSLSG 329
L LA N+L SLP+ + L L + L N+L F +L L + ++ N L
Sbjct: 87 TLGLANNQL-ASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ- 144
Query: 330 SIPS 333
SIP+
Sbjct: 145 SIPA 148
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 66/172 (38%), Gaps = 21/172 (12%)
Query: 662 IAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSL---KEPQIGDIELCKVIDPSKSTGS 718
+A +A G +L N + D++ RN L + +IGD + + I +
Sbjct: 160 VARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 216
Query: 719 LSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQ 778
V ++PPE T + +SFGV+L E+ + L + +
Sbjct: 217 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS----------LGYMPYPSKSN 266
Query: 779 QDKLDHILDFNVSRTSL-AVRSQMLTVLKVAVACVSVSPEARPKMKSVLRML 829
Q+ +L+F S + ++ V ++ C PE RP +L +
Sbjct: 267 QE----VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 42/184 (22%), Positives = 75/184 (40%), Gaps = 14/184 (7%)
Query: 578 SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYA 637
+G +K LN KI L K +E++ L + +++ + ++ EY
Sbjct: 35 TGHKVAVKILN-RQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYV 93
Query: 638 PKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLK 697
G LFD + C ++ + + + + H + ++ DL N+ L +
Sbjct: 94 SGGELFDYI--CKHGRVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHM 148
Query: 698 EPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAG---NVYSFGVILLE 754
+I D L ++ + L GS Y PE + R+ AG +++S GVIL
Sbjct: 149 NAKIADFGLSNMMSDGE---FLRDSCGSPNYAAPE-VISGRL-YAGPEVDIWSCGVILYA 203
Query: 755 LLTG 758
LL G
Sbjct: 204 LLCG 207
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 4/124 (3%)
Query: 211 SLPQNMSPNLVRLRLGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLT 270
S+P + + +L L + L + ATF L KLT+L LD N + L
Sbjct: 28 SVPSGIPADTEKLDLQSTGL-ATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELG 86
Query: 271 LLNLAQNELNGSLPIQL-GSLGILQVMNLQLNKLSGEIPSQFSQLKLLSTMNISWNSLSG 329
L LA N+L SLP+ + L L + L N+L F +L L + ++ N L
Sbjct: 87 TLGLANNQL-ASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ- 144
Query: 330 SIPS 333
SIP+
Sbjct: 145 SIPA 148
>pdb|3TWI|D Chain D, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|E Chain E, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|F Chain F, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
Length = 179
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Query: 159 QNKFSGSVPGGITRFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMSP 218
Q + SVP GI + L L N++ + P S L ++L+VN L +LP +
Sbjct: 27 QERSLASVPAGIPTTTQVLHLYINQITKLEPGVFDSLTQLTYLNLAVNQLT-ALPVGVFD 85
Query: 219 NLVRLR---LGTNLLIGEIPSATFTSLEKLTYLELDNNSF 255
L +L L N L IP F +L+ LT++ L NN +
Sbjct: 86 KLTKLTHLALHINQL-KSIPMGVFDNLKSLTHIYLFNNPW 124
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 668 QGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVG 727
+GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 142 RGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQAD-EEMTGYVATR----W 193
Query: 728 YIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELL GK
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 227
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 66/172 (38%), Gaps = 21/172 (12%)
Query: 662 IAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSL---KEPQIGDIELCKVIDPSKSTGS 718
+A +A G +L N + D++ RN L + +IGD + + I +
Sbjct: 146 VARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 202
Query: 719 LSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQ 778
V ++PPE T + +SFGV+L E+ + L + +
Sbjct: 203 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS----------LGYMPYPSKSN 252
Query: 779 QDKLDHILDFNVSRTSL-AVRSQMLTVLKVAVACVSVSPEARPKMKSVLRML 829
Q+ +L+F S + ++ V ++ C PE RP +L +
Sbjct: 253 QE----VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 49/128 (38%), Gaps = 10/128 (7%)
Query: 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
Y+ EY G +F L A A Y A + +LH S ++ DL N
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFAEPHARFY--AAQIVLTFEYLH---SLDLIYRDLKPEN 171
Query: 691 IFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGV 750
+ + Q+ D K + G + G+ Y+ PE + A + ++ GV
Sbjct: 172 LLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 751 ILLELLTG 758
++ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 668 QGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVG 727
+GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 142 RGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQAD-EEMTGYVATR----W 193
Query: 728 YIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELL GK
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 227
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 668 QGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVG 727
+GL ++H S ++ DL N+ + E +I D L + D ++ TG + T
Sbjct: 155 KGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD-AEMTGYVVTR----W 206
Query: 728 YIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE + M +++S G I+ E+LTGKT
Sbjct: 207 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKT 240
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 31.2 bits (69), Expect = 2.6, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 66/158 (41%), Gaps = 15/158 (9%)
Query: 605 ELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVL----HGCLENALDWASRY 660
E V+ +L N ++ + + ++S L E A G L L H +N ++ +
Sbjct: 62 EANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 120
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
S+ + + F+H DL+ RN+ L + +I D L K + ++
Sbjct: 121 SMGMKYLEESNFVH---------RDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQ 171
Query: 721 TVAG-SVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
T V + PE + + +V+SFGV++ E +
Sbjct: 172 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 668 QGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVG 727
+GL ++H S ++ DL N+ + E +I D L + D ++ TG + T
Sbjct: 137 KGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD-AEMTGYVVTR----W 188
Query: 728 YIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE + M +++S G I+ E+LTGKT
Sbjct: 189 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKT 222
>pdb|3OJA|B Chain B, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 597
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 32/210 (15%)
Query: 222 RLRLGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNG 281
+L +G N I +P F ++ LT L L+ N + + + LT L+++ N L
Sbjct: 103 KLYMGFNA-IRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLER 161
Query: 282 SLPIQLGSLGILQVMNLQLNKLSGE----IPSQFSQLKLLSTMNISWNSLSG-SIPSFXX 336
+ LQ + L N+L+ IPS F N+S+N LS +IP
Sbjct: 162 IEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFH-------ANVSYNLLSTLAIP---- 210
Query: 337 XXXXXXXXXXXXXXXXGSIPNSITNMR-----SLIELQLGGNQLSGTIPMMPPRLQIALN 391
+ NSI +R L L+L N L+ T ++ + ++
Sbjct: 211 ----------IAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDTAWLLNYPGLVEVD 260
Query: 392 LSSNLFEGPIPTTFARLNGLEVLDLSNNRF 421
LS N E + F ++ LE L +SNNR
Sbjct: 261 LSYNELEKIMYHPFVKMQRLERLYISNNRL 290
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 30.8 bits (68), Expect = 3.4, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 66/158 (41%), Gaps = 15/158 (9%)
Query: 605 ELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVL----HGCLENALDWASRY 660
E V+ +L N ++ + + ++S L E A G L L H +N ++ +
Sbjct: 56 EANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 114
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
S+ + + F+H DL+ RN+ L + +I D L K + ++
Sbjct: 115 SMGMKYLEESNFVH---------RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 165
Query: 721 TVAG-SVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
T V + PE + + +V+SFGV++ E +
Sbjct: 166 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 30.8 bits (68), Expect = 3.4, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 66/158 (41%), Gaps = 15/158 (9%)
Query: 605 ELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVL----HGCLENALDWASRY 660
E V+ +L N ++ + + ++S L E A G L L H +N ++ +
Sbjct: 58 EANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 116
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
S+ + + F+H DL+ RN+ L + +I D L K + ++
Sbjct: 117 SMGMKYLEESNFVH---------RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 167
Query: 721 TVAG-SVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
T V + PE + + +V+SFGV++ E +
Sbjct: 168 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 30.8 bits (68), Expect = 3.4, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 66/158 (41%), Gaps = 15/158 (9%)
Query: 605 ELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVL----HGCLENALDWASRY 660
E V+ +L N ++ + + ++S L E A G L L H +N ++ +
Sbjct: 62 EANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 120
Query: 661 SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720
S+ + + F+H DL+ RN+ L + +I D L K + ++
Sbjct: 121 SMGMKYLEESNFVH---------RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 171
Query: 721 TVAG-SVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
T V + PE + + +V+SFGV++ E +
Sbjct: 172 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725
+ +GL ++H S I+ DL N+ + E +I L + D + TG ++T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLARHTD-DEMTGYVATR--- 186
Query: 726 VGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELLTG+T
Sbjct: 187 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 668 QGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVG 727
+GL ++H S I+ DL N+ + E +I D L + D + TG ++T
Sbjct: 134 RGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQAD-EEMTGYVATR----W 185
Query: 728 YIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKT 760
Y PE M +++S G I+ ELL GK
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 219
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 30.4 bits (67), Expect = 3.9, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 219 NLVRLRLGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQN 277
NL +L +N L IP+ F L +LT L+L++N + + +SLT + L N
Sbjct: 58 NLQQLYFNSNKLTA-IPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNN 115
>pdb|2XOT|A Chain A, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
pdb|2XOT|B Chain B, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
Length = 361
Score = 30.4 bits (67), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 54/130 (41%), Gaps = 19/130 (14%)
Query: 80 LEELVLSGNAFHGEIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLD 139
L L+LS N + + NL +DLS+N+L +L LEVL+L N++
Sbjct: 66 LHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIV 125
Query: 140 GRLPTSLASITTLSRFAANQNKFSGSVPGGITRFLRNLDLSYNKLLGVIPIDLLSHPNLQ 199
+ + L + +QN+ I+RF L NKL P L
Sbjct: 126 VVDRNAFEDMAQLQKLYLSQNQ--------ISRFPVELIKDGNKL-----------PKLM 166
Query: 200 TIDLSVNMLE 209
+DLS N L+
Sbjct: 167 LLDLSSNKLK 176
>pdb|3V44|A Chain A, Crystal Structure Of The N-Terminal Fragment Of Zebrafish
Tlr5
Length = 407
Score = 30.0 bits (66), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 6 GIDGLKLLNFSKNELVSLPT--FNGFAGLEVLDFSSNNLNGNI 46
G+ L +L N+ + L T FNG A LEVL + NL+G +
Sbjct: 77 GLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAV 119
Score = 30.0 bits (66), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 46/117 (39%), Gaps = 13/117 (11%)
Query: 83 LVLSGNAFHGEIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLDGRL 142
LV+ N F G +L ++ L N L+ LEVL L+ NLDG +
Sbjct: 68 LVIRNNTFRG--------LSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAV 119
Query: 143 PTS--LASITTLSRFAANQNKFSGSVPGGI---TRFLRNLDLSYNKLLGVIPIDLLS 194
+ +T+L N P R LDL++NK+ + DLL+
Sbjct: 120 LSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLN 176
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 30.0 bits (66), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 49/128 (38%), Gaps = 10/128 (7%)
Query: 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690
Y+ EY G +F L + A Y A + +LH S ++ DL N
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLKPEN 171
Query: 691 IFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGV 750
+ + Q+ D K + G + G+ Y+ PE + A + ++ GV
Sbjct: 172 LLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 751 ILLELLTG 758
++ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|4ECO|A Chain A, Crystal Structure Of A Hypothetical Protein (Bacegg_03329)
From Bacteroides Eggerthii Dsm 20697 At 2.70 A
Resolution
pdb|4ECO|B Chain B, Crystal Structure Of A Hypothetical Protein (Bacegg_03329)
From Bacteroides Eggerthii Dsm 20697 At 2.70 A
Resolution
Length = 636
Score = 30.0 bits (66), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 104 LTLIDLSANNLSGSVPDRIGELSKLEVLILSAN 136
+T + L SG VPD IG+L++LEVL L ++
Sbjct: 83 VTGLSLEGFGASGRVPDAIGQLTELEVLALGSH 115
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 30.0 bits (66), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 68/161 (42%), Gaps = 18/161 (11%)
Query: 604 KELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLE-----NALDWAS 658
+E +++ +L N ++ L V +++ L E A G L L G E N +
Sbjct: 59 REAQIMHQLDNPYIVR-LIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLH 117
Query: 659 RYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVI--DPSKST 716
+ S+ + + F+H DL+ RN+ L + +I D L K + D S T
Sbjct: 118 QVSMGMKYLEEKNFVH---------RDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 168
Query: 717 GSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757
S + + PE + + +V+S+GV + E L+
Sbjct: 169 AR-SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|2O6R|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B61
Length = 177
Score = 29.6 bits (65), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 3/123 (2%)
Query: 211 SLPQNMSPNLVRLRLGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLT 270
S+P + + RL L +N L +P F L +LT L L N + LT
Sbjct: 21 SVPTGIPSSATRLELESNKL-QSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLT 79
Query: 271 LLNLAQNELNGSLPIQL-GSLGILQVMNLQLNKLSGEIPSQFSQLKLLSTMNISWNSLSG 329
+L L +N+L SLP + L L+ + L N+L F +L L + + N
Sbjct: 80 ILYLHENKLQ-SLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138
Query: 330 SIP 332
S P
Sbjct: 139 SCP 141
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 29.6 bits (65), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 66/162 (40%), Gaps = 8/162 (4%)
Query: 599 HHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWAS 658
H K ++E + L + N++ + YL ++ G LF+ + A ++ S
Sbjct: 54 HQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDI-----VAREYYS 108
Query: 659 RYSIAVGVAQGL-AFLHGFTSNPILLLDLSTRNIFLKS-LKEPQIGDIELCKVIDPSKST 716
+ + Q L A LH ++ +L N+ L S LK + + I+
Sbjct: 109 EADASHCIQQILEAVLHCHQMG-VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ 167
Query: 717 GSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 758
+ AG+ GY+ PE ++++ GVIL LL G
Sbjct: 168 QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.135 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,513,674
Number of Sequences: 62578
Number of extensions: 826215
Number of successful extensions: 3479
Number of sequences better than 100.0: 762
Number of HSP's better than 100.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 594
Number of HSP's that attempted gapping in prelim test: 2340
Number of HSP's gapped (non-prelim): 1089
length of query: 833
length of database: 14,973,337
effective HSP length: 107
effective length of query: 726
effective length of database: 8,277,491
effective search space: 6009458466
effective search space used: 6009458466
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)