Query 003296
Match_columns 833
No_of_seqs 907 out of 5084
Neff 9.5
Searched_HMMs 46136
Date Thu Mar 28 20:48:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003296.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003296hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 2E-100 4E-105 945.2 62.0 791 6-832 116-951 (968)
2 KOG1187 Serine/threonine prote 100.0 9.5E-57 2.1E-61 481.9 25.9 278 547-832 68-352 (361)
3 PLN00113 leucine-rich repeat r 100.0 1.4E-53 3E-58 527.6 36.9 445 4-451 89-565 (968)
4 KOG0192 Tyrosine kinase specif 100.0 1.6E-50 3.5E-55 429.8 22.0 254 559-832 45-303 (362)
5 KOG0581 Mitogen-activated prot 100.0 2.9E-51 6.3E-56 411.6 14.7 253 556-828 80-335 (364)
6 KOG0575 Polo-like serine/threo 100.0 4E-49 8.8E-54 418.7 20.3 251 555-828 18-269 (592)
7 KOG0615 Serine/threonine prote 100.0 7.8E-50 1.7E-54 403.0 12.2 258 553-828 170-437 (475)
8 KOG0595 Serine/threonine-prote 100.0 2.2E-49 4.8E-54 400.9 14.6 202 555-766 10-218 (429)
9 KOG0591 NIMA (never in mitosis 100.0 9.5E-50 2E-54 382.4 9.1 258 555-830 19-283 (375)
10 KOG0598 Ribosomal protein S6 k 100.0 2.6E-48 5.6E-53 390.4 12.7 245 554-820 24-269 (357)
11 KOG0593 Predicted protein kina 100.0 1.4E-46 3E-51 364.3 12.4 264 556-828 3-284 (396)
12 KOG0197 Tyrosine kinases [Sign 100.0 3.2E-46 6.8E-51 393.4 14.8 251 559-832 210-461 (468)
13 KOG0592 3-phosphoinositide-dep 100.0 6.7E-46 1.4E-50 387.0 17.0 256 552-828 70-338 (604)
14 KOG0578 p21-activated serine/t 100.0 2.6E-45 5.6E-50 386.6 16.6 250 555-828 273-523 (550)
15 KOG0600 Cdc2-related protein k 100.0 5.8E-45 1.3E-49 376.9 17.8 265 554-827 116-399 (560)
16 KOG0582 Ste20-like serine/thre 100.0 1.5E-44 3.3E-49 368.2 20.2 263 555-828 26-293 (516)
17 KOG0661 MAPK related serine/th 100.0 1.5E-45 3.3E-50 378.4 10.6 266 552-828 7-291 (538)
18 KOG0659 Cdk activating kinase 100.0 2.8E-44 6.1E-49 342.9 18.0 264 556-828 3-281 (318)
19 KOG0198 MEKK and related serin 100.0 7.3E-45 1.6E-49 373.9 15.1 253 557-829 19-277 (313)
20 KOG0597 Serine-threonine prote 100.0 1.4E-45 3E-50 383.9 9.3 248 556-828 3-251 (808)
21 KOG0580 Serine/threonine prote 100.0 9.6E-45 2.1E-49 341.2 13.8 252 554-828 21-273 (281)
22 KOG0616 cAMP-dependent protein 100.0 2.2E-44 4.8E-49 348.6 14.5 239 555-819 44-283 (355)
23 KOG0605 NDR and related serine 100.0 1.7E-44 3.6E-49 377.2 13.7 258 553-828 139-445 (550)
24 KOG4721 Serine/threonine prote 100.0 1.4E-44 3E-49 375.9 11.2 239 560-831 129-367 (904)
25 KOG1026 Nerve growth factor re 100.0 2.6E-44 5.7E-49 397.0 14.1 257 555-831 486-761 (774)
26 KOG0583 Serine/threonine prote 100.0 7E-44 1.5E-48 383.2 16.8 254 553-828 15-275 (370)
27 cd05102 PTKc_VEGFR3 Catalytic 100.0 2.7E-43 5.8E-48 383.6 19.0 260 554-832 6-334 (338)
28 KOG0588 Serine/threonine prote 100.0 7.1E-44 1.5E-48 379.2 13.5 248 557-828 14-263 (786)
29 KOG0201 Serine/threonine prote 100.0 4.4E-44 9.5E-49 365.1 9.8 250 555-828 13-263 (467)
30 KOG0193 Serine/threonine prote 100.0 1.8E-43 3.9E-48 373.2 14.3 257 557-832 394-653 (678)
31 KOG0694 Serine/threonine prote 100.0 1.4E-43 3E-48 380.6 13.7 246 553-822 366-613 (694)
32 PHA02988 hypothetical protein; 100.0 1.6E-42 3.5E-47 366.7 19.5 249 560-832 25-279 (283)
33 KOG0663 Protein kinase PITSLRE 100.0 8.9E-43 1.9E-47 342.5 15.6 264 555-828 76-361 (419)
34 cd05631 STKc_GRK4 Catalytic do 100.0 2.4E-42 5.2E-47 366.4 19.3 252 557-828 2-261 (285)
35 KOG0033 Ca2+/calmodulin-depend 100.0 3E-44 6.5E-49 337.6 2.6 256 552-828 8-267 (355)
36 KOG0599 Phosphorylase kinase g 100.0 3.3E-43 7.3E-48 335.4 9.3 258 552-828 14-283 (411)
37 KOG0585 Ca2+/calmodulin-depend 100.0 1.7E-42 3.7E-47 355.3 14.9 259 553-829 95-373 (576)
38 KOG0611 Predicted serine/threo 100.0 3.2E-43 6.9E-48 352.2 9.3 250 554-828 52-303 (668)
39 cd05571 STKc_PKB Catalytic dom 100.0 9.1E-42 2E-46 368.5 19.3 245 561-828 1-251 (323)
40 cd05104 PTKc_Kit Catalytic dom 100.0 9.2E-42 2E-46 375.4 19.6 260 554-832 34-374 (375)
41 KOG0658 Glycogen synthase kina 100.0 1.2E-42 2.6E-47 348.7 10.9 258 556-828 25-306 (364)
42 KOG4194 Membrane glycoprotein 100.0 2.8E-43 6E-48 367.9 6.3 389 10-445 54-451 (873)
43 PTZ00263 protein kinase A cata 100.0 1.1E-41 2.4E-46 368.6 18.9 248 555-828 18-271 (329)
44 cd05106 PTKc_CSF-1R Catalytic 100.0 1.2E-41 2.7E-46 373.9 19.0 260 554-832 37-372 (374)
45 cd05612 STKc_PRKX_like Catalyt 100.0 9E-42 1.9E-46 363.1 16.9 247 556-828 2-254 (291)
46 KOG1094 Discoidin domain recep 100.0 1.3E-41 2.9E-46 355.5 17.5 265 552-831 535-803 (807)
47 cd05096 PTKc_DDR1 Catalytic do 100.0 2.6E-41 5.6E-46 362.3 19.8 262 555-831 5-304 (304)
48 KOG0194 Protein tyrosine kinas 100.0 3.7E-42 8.1E-47 369.3 13.1 254 559-832 161-420 (474)
49 cd05585 STKc_YPK1_like Catalyt 100.0 8.8E-42 1.9E-46 366.9 15.9 243 563-828 1-247 (312)
50 KOG0589 Serine/threonine prote 100.0 5.7E-42 1.2E-46 360.6 13.6 253 555-828 4-258 (426)
51 PTZ00426 cAMP-dependent protei 100.0 2.7E-41 5.8E-46 366.3 18.7 248 555-828 30-284 (340)
52 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2.4E-41 5.2E-46 367.2 18.0 255 556-828 2-257 (333)
53 cd05595 STKc_PKB_beta Catalyti 100.0 4.3E-41 9.4E-46 363.0 19.8 245 561-828 1-251 (323)
54 cd05593 STKc_PKB_gamma Catalyt 100.0 5.5E-41 1.2E-45 362.8 20.3 245 561-828 1-251 (328)
55 KOG0594 Protein kinase PCTAIRE 100.0 5.1E-41 1.1E-45 338.2 17.8 266 555-828 11-302 (323)
56 cd07848 STKc_CDKL5 Catalytic d 100.0 3.9E-41 8.5E-46 357.9 17.7 265 556-828 2-284 (287)
57 cd06649 PKc_MEK2 Catalytic dom 100.0 8.9E-41 1.9E-45 362.1 20.2 263 554-828 4-301 (331)
58 KOG0574 STE20-like serine/thre 100.0 7.9E-43 1.7E-47 336.8 3.6 254 551-828 29-283 (502)
59 KOG0577 Serine/threonine prote 100.0 6.7E-42 1.5E-46 357.4 10.7 250 554-828 25-278 (948)
60 cd05584 STKc_p70S6K Catalytic 100.0 1.3E-40 2.7E-45 359.6 20.6 246 561-828 2-256 (323)
61 KOG1095 Protein tyrosine kinas 100.0 1.8E-41 3.9E-46 388.3 14.7 256 557-832 694-961 (1025)
62 cd07862 STKc_CDK6 Catalytic do 100.0 1.3E-40 2.8E-45 354.5 20.0 264 556-828 2-287 (290)
63 cd05048 PTKc_Ror Catalytic Dom 100.0 2E-40 4.4E-45 351.7 21.3 258 555-832 5-283 (283)
64 cd07871 STKc_PCTAIRE3 Catalyti 100.0 8.7E-41 1.9E-45 355.1 18.4 263 556-828 6-285 (288)
65 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.3E-40 2.8E-45 356.6 19.5 264 555-828 5-288 (303)
66 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.6E-40 3.5E-45 348.8 19.8 257 554-832 4-265 (266)
67 KOG0660 Mitogen-activated prot 100.0 4.5E-41 9.7E-46 336.7 14.5 266 555-828 22-310 (359)
68 cd05626 STKc_LATS2 Catalytic d 100.0 4.9E-41 1.1E-45 371.2 16.3 256 556-828 2-305 (381)
69 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.3E-40 2.8E-45 366.9 19.5 259 555-832 37-397 (400)
70 cd05594 STKc_PKB_alpha Catalyt 100.0 1.1E-40 2.3E-45 360.7 17.7 246 561-828 1-252 (325)
71 cd05596 STKc_ROCK Catalytic do 100.0 8.3E-41 1.8E-45 367.1 16.6 256 554-828 42-304 (370)
72 cd05590 STKc_nPKC_eta Catalyti 100.0 2.3E-40 4.9E-45 356.9 19.5 245 561-828 1-253 (320)
73 KOG0032 Ca2+/calmodulin-depend 100.0 1.8E-40 4E-45 356.0 18.6 256 552-828 32-293 (382)
74 KOG0196 Tyrosine kinase, EPH ( 100.0 1.1E-41 2.5E-46 367.4 8.9 254 557-832 631-891 (996)
75 cd05072 PTKc_Lyn Catalytic dom 100.0 5E-40 1.1E-44 344.2 21.2 256 554-832 5-261 (261)
76 cd05591 STKc_nPKC_epsilon Cata 100.0 2.8E-40 6.1E-45 356.7 19.8 245 561-828 1-254 (321)
77 cd05605 STKc_GRK4_like Catalyt 100.0 2.2E-40 4.8E-45 351.4 18.6 253 556-828 1-261 (285)
78 cd05608 STKc_GRK1 Catalytic do 100.0 1.6E-40 3.4E-45 351.6 17.2 249 563-828 1-257 (280)
79 cd05628 STKc_NDR1 Catalytic do 100.0 9.7E-41 2.1E-45 366.5 16.1 256 556-828 2-293 (363)
80 cd05599 STKc_NDR_like Catalyti 100.0 6.3E-41 1.4E-45 368.8 14.5 255 556-828 2-296 (364)
81 cd05054 PTKc_VEGFR Catalytic d 100.0 2.8E-40 6.1E-45 358.3 19.2 259 555-832 7-333 (337)
82 cd05052 PTKc_Abl Catalytic dom 100.0 7.4E-40 1.6E-44 343.4 21.6 255 555-832 6-262 (263)
83 cd05108 PTKc_EGFR Catalytic do 100.0 1.8E-40 3.8E-45 357.7 17.3 257 554-832 6-268 (316)
84 cd05589 STKc_PKN Catalytic dom 100.0 4.2E-40 9.2E-45 355.8 20.3 248 557-828 1-257 (324)
85 cd05114 PTKc_Tec_Rlk Catalytic 100.0 8.5E-40 1.8E-44 341.5 21.8 251 555-829 4-255 (256)
86 PTZ00267 NIMA-related protein 100.0 2.5E-40 5.4E-45 374.9 19.1 252 556-828 68-323 (478)
87 cd05588 STKc_aPKC Catalytic do 100.0 2.3E-40 5E-45 358.3 18.0 247 561-828 1-262 (329)
88 PF07714 Pkinase_Tyr: Protein 100.0 5.3E-41 1.1E-45 350.7 12.5 250 560-829 4-259 (259)
89 cd05592 STKc_nPKC_theta_delta 100.0 5.3E-40 1.1E-44 353.4 20.5 244 561-827 1-247 (316)
90 cd05607 STKc_GRK7 Catalytic do 100.0 6.4E-40 1.4E-44 346.3 20.8 247 563-829 1-251 (277)
91 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.1E-40 4.5E-45 361.2 17.5 264 557-828 2-290 (338)
92 KOG0610 Putative serine/threon 100.0 3.2E-40 6.9E-45 334.2 17.4 256 556-828 78-392 (459)
93 cd06650 PKc_MEK1 Catalytic dom 100.0 6.9E-40 1.5E-44 355.1 21.1 264 554-828 4-299 (333)
94 cd05620 STKc_nPKC_delta Cataly 100.0 5.7E-40 1.2E-44 353.1 20.2 244 561-827 1-247 (316)
95 cd05587 STKc_cPKC Catalytic do 100.0 4.7E-40 1E-44 355.4 19.5 250 556-828 1-257 (324)
96 cd05068 PTKc_Frk_like Catalyti 100.0 1.6E-39 3.4E-44 340.4 22.9 256 554-832 5-261 (261)
97 cd05621 STKc_ROCK2 Catalytic d 100.0 2E-40 4.3E-45 363.5 16.7 256 554-828 42-304 (370)
98 PHA03212 serine/threonine kina 100.0 3.9E-40 8.4E-45 363.1 19.0 257 555-828 92-376 (391)
99 cd05618 STKc_aPKC_iota Catalyt 100.0 1.7E-40 3.6E-45 359.2 15.7 247 561-828 1-262 (329)
100 cd05619 STKc_nPKC_theta Cataly 100.0 4.6E-40 9.9E-45 353.7 18.9 244 561-827 1-247 (316)
101 cd05614 STKc_MSK2_N N-terminal 100.0 1.3E-40 2.7E-45 361.5 14.7 254 556-828 1-267 (332)
102 cd05033 PTKc_EphR Catalytic do 100.0 1.2E-39 2.6E-44 342.4 21.6 257 555-832 4-265 (266)
103 cd08228 STKc_Nek6 Catalytic do 100.0 9.1E-40 2E-44 343.6 20.3 261 555-833 2-266 (267)
104 cd05570 STKc_PKC Catalytic dom 100.0 6.8E-40 1.5E-44 353.1 19.7 245 561-828 1-252 (318)
105 cd05616 STKc_cPKC_beta Catalyt 100.0 6.2E-40 1.4E-44 354.3 19.4 249 556-827 1-256 (323)
106 cd05093 PTKc_TrkB Catalytic do 100.0 1.3E-39 2.8E-44 346.3 21.4 257 555-832 5-279 (288)
107 cd05629 STKc_NDR_like_fungal C 100.0 1.3E-40 2.9E-45 367.6 14.3 255 556-828 2-305 (377)
108 cd05062 PTKc_IGF-1R Catalytic 100.0 6.8E-40 1.5E-44 346.4 19.1 259 553-831 4-277 (277)
109 cd05573 STKc_ROCK_NDR_like Cat 100.0 2.7E-40 5.9E-45 362.0 16.4 255 556-828 2-285 (350)
110 cd05094 PTKc_TrkC Catalytic do 100.0 1.1E-39 2.3E-44 347.5 20.3 257 555-832 5-282 (291)
111 cd05625 STKc_LATS1 Catalytic d 100.0 1.9E-40 4.1E-45 367.0 14.9 255 556-828 2-305 (382)
112 cd05049 PTKc_Trk Catalytic dom 100.0 1.3E-39 2.7E-44 345.0 20.5 257 555-831 5-280 (280)
113 KOG3653 Transforming growth fa 100.0 1.1E-39 2.3E-44 335.2 18.9 261 560-832 215-503 (534)
114 cd05090 PTKc_Ror1 Catalytic do 100.0 1.3E-39 2.8E-44 345.4 20.1 257 555-831 5-282 (283)
115 PLN00034 mitogen-activated pro 100.0 7.5E-40 1.6E-44 358.2 18.8 249 555-828 74-328 (353)
116 cd05575 STKc_SGK Catalytic dom 100.0 2.4E-40 5.1E-45 357.6 14.5 240 561-823 1-242 (323)
117 cd05601 STKc_CRIK Catalytic do 100.0 1.3E-40 2.8E-45 361.1 12.2 255 556-828 2-263 (330)
118 cd05084 PTKc_Fes Catalytic dom 100.0 1.8E-39 3.9E-44 338.2 20.1 250 561-831 1-252 (252)
119 KOG4717 Serine/threonine prote 100.0 2.8E-40 6E-45 340.2 13.6 250 554-827 17-269 (864)
120 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.5E-39 3.3E-44 340.6 19.4 257 553-832 4-261 (261)
121 cd05598 STKc_LATS Catalytic do 100.0 1.8E-40 3.9E-45 366.6 12.8 255 556-828 2-301 (376)
122 cd05111 PTK_HER3 Pseudokinase 100.0 1.5E-39 3.3E-44 344.0 19.2 256 555-832 7-268 (279)
123 PTZ00283 serine/threonine prot 100.0 6.7E-40 1.4E-44 371.2 17.5 256 554-828 31-297 (496)
124 cd05055 PTKc_PDGFR Catalytic d 100.0 1.9E-39 4.1E-44 347.1 19.8 260 554-832 34-301 (302)
125 cd08529 STKc_FA2-like Catalyti 100.0 2.6E-39 5.6E-44 337.8 20.4 252 556-828 1-253 (256)
126 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.7E-39 3.6E-44 357.8 19.6 260 554-832 36-399 (401)
127 cd05582 STKc_RSK_N N-terminal 100.0 6.8E-40 1.5E-44 353.3 16.3 240 561-824 2-245 (318)
128 cd05113 PTKc_Btk_Bmx Catalytic 100.0 3.3E-39 7.2E-44 336.8 20.8 252 555-830 4-256 (256)
129 cd05615 STKc_cPKC_alpha Cataly 100.0 2.1E-39 4.6E-44 349.8 19.5 244 556-822 1-246 (323)
130 cd05603 STKc_SGK2 Catalytic do 100.0 5E-40 1.1E-44 354.9 14.5 240 561-823 1-242 (321)
131 cd05602 STKc_SGK1 Catalytic do 100.0 1.7E-39 3.7E-44 351.2 18.7 244 561-827 1-246 (325)
132 cd05035 PTKc_Axl_like Catalyti 100.0 5.6E-39 1.2E-43 338.7 22.0 257 557-832 1-272 (273)
133 KOG1989 ARK protein kinase fam 100.0 5.3E-40 1.1E-44 365.1 14.7 255 557-833 39-312 (738)
134 cd05617 STKc_aPKC_zeta Catalyt 100.0 8.1E-40 1.8E-44 353.8 15.9 247 561-828 1-260 (327)
135 cd05091 PTKc_Ror2 Catalytic do 100.0 1.9E-39 4.1E-44 344.2 18.4 256 556-831 6-282 (283)
136 cd05622 STKc_ROCK1 Catalytic d 100.0 1E-39 2.3E-44 358.3 16.6 259 552-829 40-305 (371)
137 cd05604 STKc_SGK3 Catalytic do 100.0 4.2E-40 9.2E-45 356.0 13.2 243 561-826 1-245 (325)
138 KOG0986 G protein-coupled rece 100.0 3.1E-40 6.7E-45 336.3 11.3 250 554-823 184-436 (591)
139 cd05632 STKc_GRK5 Catalytic do 100.0 3.4E-39 7.4E-44 342.3 19.9 254 557-828 2-261 (285)
140 KOG4279 Serine/threonine prote 100.0 3.5E-40 7.5E-45 349.9 12.0 245 561-827 581-831 (1226)
141 cd05071 PTKc_Src Catalytic dom 100.0 9E-39 2E-43 334.8 22.6 253 555-831 6-259 (262)
142 cd05630 STKc_GRK6 Catalytic do 100.0 2.3E-39 5.1E-44 343.4 18.3 254 557-828 2-261 (285)
143 cd08229 STKc_Nek7 Catalytic do 100.0 4.9E-39 1.1E-43 338.0 20.5 259 556-832 3-265 (267)
144 cd05053 PTKc_FGFR Catalytic do 100.0 3.4E-39 7.3E-44 344.1 19.6 260 553-832 10-291 (293)
145 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 8.4E-39 1.8E-43 336.2 22.3 261 555-833 2-266 (267)
146 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 9.3E-39 2E-43 334.4 22.5 253 555-831 6-259 (260)
147 cd05036 PTKc_ALK_LTK Catalytic 100.0 4E-39 8.7E-44 340.5 19.5 259 553-831 4-277 (277)
148 cd05045 PTKc_RET Catalytic dom 100.0 4.2E-39 9E-44 342.8 19.7 256 557-832 2-286 (290)
149 cd05059 PTKc_Tec_like Catalyti 100.0 6.5E-39 1.4E-43 334.7 20.8 250 556-829 5-255 (256)
150 KOG0584 Serine/threonine prote 100.0 3.5E-40 7.7E-45 351.0 11.1 250 558-828 43-296 (632)
151 KOG4194 Membrane glycoprotein 100.0 3.8E-41 8.1E-46 352.0 3.3 347 10-380 80-433 (873)
152 cd07876 STKc_JNK2 Catalytic do 100.0 2.7E-39 5.9E-44 354.8 18.2 264 552-828 18-315 (359)
153 cd05075 PTKc_Axl Catalytic dom 100.0 6.9E-39 1.5E-43 337.8 20.6 256 558-832 2-271 (272)
154 PTZ00036 glycogen synthase kin 100.0 1.4E-39 3E-44 364.5 16.1 260 554-828 65-351 (440)
155 cd05627 STKc_NDR2 Catalytic do 100.0 5.9E-40 1.3E-44 360.0 12.9 255 556-828 2-293 (360)
156 PRK13184 pknD serine/threonine 100.0 1.8E-39 4E-44 375.4 17.4 260 556-831 3-289 (932)
157 cd05101 PTKc_FGFR2 Catalytic d 100.0 7.4E-39 1.6E-43 343.3 21.0 259 554-832 14-296 (304)
158 cd05092 PTKc_TrkA Catalytic do 100.0 6.9E-39 1.5E-43 339.2 20.4 256 555-831 5-280 (280)
159 cd05103 PTKc_VEGFR2 Catalytic 100.0 4E-39 8.6E-44 350.8 19.1 259 555-832 7-339 (343)
160 KOG2345 Serine/threonine prote 100.0 6.6E-40 1.4E-44 309.9 11.1 261 555-832 21-300 (302)
161 cd06637 STKc_TNIK Catalytic do 100.0 6.4E-39 1.4E-43 338.1 19.9 254 552-828 3-269 (272)
162 cd05051 PTKc_DDR Catalytic dom 100.0 7.2E-39 1.6E-43 342.2 20.6 263 554-831 4-296 (296)
163 cd07853 STKc_NLK Catalytic dom 100.0 2.6E-39 5.6E-44 356.6 17.5 264 556-828 1-288 (372)
164 cd05097 PTKc_DDR_like Catalyti 100.0 6.4E-39 1.4E-43 342.2 20.0 262 555-831 5-295 (295)
165 cd06646 STKc_MAP4K5 Catalytic 100.0 5.2E-39 1.1E-43 337.8 18.7 255 554-829 8-266 (267)
166 cd05109 PTKc_HER2 Catalytic do 100.0 1E-38 2.2E-43 337.8 20.9 257 554-832 6-268 (279)
167 KOG0579 Ste20-like serine/thre 100.0 2.5E-40 5.5E-45 347.5 8.4 250 557-828 34-289 (1187)
168 cd05116 PTKc_Syk Catalytic dom 100.0 9.2E-39 2E-43 333.8 20.0 248 562-831 2-254 (257)
169 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.4E-38 3E-43 334.9 21.5 254 561-830 1-268 (269)
170 cd05067 PTKc_Lck_Blk Catalytic 100.0 2E-38 4.3E-43 332.0 22.5 254 554-831 5-259 (260)
171 cd07872 STKc_PCTAIRE2 Catalyti 100.0 5.6E-39 1.2E-43 344.9 18.8 264 555-828 6-286 (309)
172 cd07863 STKc_CDK4 Catalytic do 100.0 6.8E-39 1.5E-43 340.9 19.1 263 557-828 2-285 (288)
173 cd05043 PTK_Ryk Pseudokinase d 100.0 8.1E-39 1.8E-43 338.8 19.6 259 554-832 5-276 (280)
174 cd05069 PTKc_Yes Catalytic dom 100.0 1.7E-38 3.8E-43 332.3 21.6 253 555-831 6-259 (260)
175 cd05082 PTKc_Csk Catalytic dom 100.0 1.8E-38 3.9E-43 331.4 21.6 249 555-832 6-256 (256)
176 cd05098 PTKc_FGFR1 Catalytic d 100.0 6.4E-39 1.4E-43 344.2 18.6 258 555-832 18-299 (307)
177 cd05032 PTKc_InsR_like Catalyt 100.0 1.1E-38 2.5E-43 337.1 20.2 258 554-831 5-277 (277)
178 KOG0667 Dual-specificity tyros 100.0 3.2E-39 6.9E-44 347.7 15.7 259 556-828 187-502 (586)
179 cd05085 PTKc_Fer Catalytic dom 100.0 2E-38 4.4E-43 329.8 21.1 248 561-830 1-249 (250)
180 cd05597 STKc_DMPK_like Catalyt 100.0 8.2E-39 1.8E-43 346.5 18.7 257 556-828 2-266 (331)
181 cd07874 STKc_JNK3 Catalytic do 100.0 4.4E-39 9.5E-44 352.7 16.9 264 552-828 14-311 (355)
182 cd05089 PTKc_Tie1 Catalytic do 100.0 1.5E-38 3.3E-43 339.5 20.5 255 555-832 2-275 (297)
183 cd06654 STKc_PAK1 Catalytic do 100.0 1.1E-38 2.4E-43 340.2 19.2 250 555-828 20-270 (296)
184 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.9E-38 4.1E-43 333.7 20.5 258 554-832 4-267 (268)
185 PHA03211 serine/threonine kina 100.0 1.4E-38 3E-43 354.5 20.5 258 556-828 170-455 (461)
186 cd05115 PTKc_Zap-70 Catalytic 100.0 2.1E-38 4.6E-43 330.9 20.7 249 562-832 2-255 (257)
187 cd05050 PTKc_Musk Catalytic do 100.0 1.5E-38 3.2E-43 338.2 19.9 258 554-831 4-288 (288)
188 cd05586 STKc_Sck1_like Catalyt 100.0 4.8E-39 1E-43 348.7 16.3 244 563-828 1-253 (330)
189 cd06625 STKc_MEKK3_like Cataly 100.0 1.8E-38 3.9E-43 332.9 20.1 256 555-828 2-260 (263)
190 cd05095 PTKc_DDR2 Catalytic do 100.0 2E-38 4.2E-43 338.6 20.5 263 555-831 5-296 (296)
191 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1E-38 2.2E-43 338.5 18.3 265 557-832 6-281 (283)
192 cd05088 PTKc_Tie2 Catalytic do 100.0 1.2E-38 2.6E-43 341.1 18.9 255 555-832 7-280 (303)
193 cd05624 STKc_MRCK_beta Catalyt 100.0 7.3E-39 1.6E-43 346.9 17.5 257 556-828 2-266 (331)
194 cd05039 PTKc_Csk_like Catalyti 100.0 1.3E-38 2.7E-43 332.6 18.6 250 555-832 6-256 (256)
195 KOG0596 Dual specificity; seri 100.0 1.2E-39 2.6E-44 340.0 10.7 255 555-828 361-627 (677)
196 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 7.3E-39 1.6E-43 339.9 17.0 267 555-833 4-284 (284)
197 cd05623 STKc_MRCK_alpha Cataly 100.0 9.3E-39 2E-43 346.4 18.2 257 556-828 2-266 (332)
198 cd05061 PTKc_InsR Catalytic do 100.0 1.8E-38 3.9E-43 337.5 20.0 259 553-831 4-277 (288)
199 cd06615 PKc_MEK Catalytic doma 100.0 1.5E-38 3.2E-43 341.3 19.3 261 556-828 2-287 (308)
200 cd05058 PTKc_Met_Ron Catalytic 100.0 2E-38 4.3E-43 332.4 19.6 251 561-832 1-259 (262)
201 cd07875 STKc_JNK1 Catalytic do 100.0 9.6E-39 2.1E-43 351.2 18.0 263 553-828 22-318 (364)
202 cd05086 PTKc_Aatyk2 Catalytic 100.0 3.8E-38 8.2E-43 331.2 21.4 253 562-830 2-267 (268)
203 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.1E-38 2.5E-43 338.4 17.5 269 555-832 4-283 (284)
204 cd08219 STKc_Nek3 Catalytic do 100.0 2E-38 4.3E-43 330.9 19.0 250 557-828 2-252 (255)
205 cd05065 PTKc_EphR_B Catalytic 100.0 2.3E-38 5E-43 333.2 19.2 257 555-832 4-268 (269)
206 cd08227 PK_STRAD_alpha Pseudok 100.0 2E-38 4.4E-43 343.3 19.2 262 559-828 2-307 (327)
207 cd05099 PTKc_FGFR4 Catalytic d 100.0 3.3E-38 7.1E-43 339.7 20.6 259 554-832 11-293 (314)
208 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.8E-38 4E-43 346.2 18.7 263 552-828 12-298 (343)
209 cd05044 PTKc_c-ros Catalytic d 100.0 2E-38 4.3E-43 333.7 18.3 251 561-831 1-269 (269)
210 cd05066 PTKc_EphR_A Catalytic 100.0 3.7E-38 8E-43 331.3 20.2 257 555-832 4-266 (267)
211 cd05042 PTKc_Aatyk Catalytic d 100.0 3.8E-38 8.2E-43 331.6 20.1 253 562-830 2-268 (269)
212 cd06643 STKc_SLK Catalytic dom 100.0 3.4E-38 7.3E-43 334.4 19.8 252 555-828 5-262 (282)
213 cd05040 PTKc_Ack_like Catalyti 100.0 3.5E-38 7.6E-43 329.5 19.6 250 561-830 1-256 (257)
214 KOG4278 Protein tyrosine kinas 100.0 2.7E-39 5.9E-44 339.1 10.9 251 559-832 271-523 (1157)
215 cd05047 PTKc_Tie Catalytic dom 100.0 4E-38 8.6E-43 331.5 20.0 249 561-832 1-268 (270)
216 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 2E-38 4.4E-43 332.0 17.6 239 561-829 1-261 (262)
217 PTZ00284 protein kinase; Provi 100.0 1.6E-38 3.6E-43 360.2 18.0 262 552-828 126-438 (467)
218 cd07861 STKc_CDK1_euk Catalyti 100.0 2.9E-38 6.3E-43 335.5 18.8 265 556-828 1-282 (285)
219 cd05073 PTKc_Hck Catalytic dom 100.0 9E-38 1.9E-42 326.9 21.9 254 554-831 5-259 (260)
220 cd08223 STKc_Nek4 Catalytic do 100.0 6.3E-38 1.4E-42 327.5 20.6 252 556-828 1-254 (257)
221 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2.9E-38 6.3E-43 338.2 18.4 264 555-828 6-286 (301)
222 cd06645 STKc_MAP4K3 Catalytic 100.0 3.2E-38 7E-43 331.8 18.4 253 555-828 9-265 (267)
223 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.5E-38 3.2E-43 335.2 15.9 239 562-830 2-274 (274)
224 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.9E-38 4.1E-43 336.6 16.7 252 555-829 5-267 (284)
225 PTZ00266 NIMA-related protein 100.0 1.2E-38 2.6E-43 369.8 16.4 256 554-828 12-295 (1021)
226 cd05060 PTKc_Syk_like Catalyti 100.0 8.9E-38 1.9E-42 326.4 21.3 249 561-832 1-255 (257)
227 cd06619 PKc_MKK5 Catalytic dom 100.0 2.9E-38 6.3E-43 334.2 17.9 251 556-828 2-253 (279)
228 cd00192 PTKc Catalytic domain 100.0 1.2E-37 2.6E-42 326.2 22.4 250 561-830 1-262 (262)
229 cd05100 PTKc_FGFR3 Catalytic d 100.0 6E-38 1.3E-42 340.7 20.8 258 555-832 12-293 (334)
230 cd06642 STKc_STK25-YSK1 Cataly 100.0 3E-38 6.6E-43 333.8 17.8 248 556-828 5-253 (277)
231 cd06612 STKc_MST1_2 Catalytic 100.0 3.6E-38 7.8E-43 329.1 18.0 250 555-828 3-253 (256)
232 cd06655 STKc_PAK2 Catalytic do 100.0 4E-38 8.6E-43 335.8 18.6 249 556-828 20-269 (296)
233 cd06656 STKc_PAK3 Catalytic do 100.0 3.7E-38 8E-43 336.4 18.3 251 554-828 18-269 (297)
234 cd06624 STKc_ASK Catalytic dom 100.0 2.7E-38 5.9E-43 332.5 16.9 255 552-828 5-265 (268)
235 PHA03207 serine/threonine kina 100.0 4.4E-38 9.6E-43 348.5 19.4 260 554-828 91-375 (392)
236 cd06631 STKc_YSK4 Catalytic do 100.0 4.1E-38 8.8E-43 330.6 18.1 255 557-828 2-262 (265)
237 cd07868 STKc_CDK8 Catalytic do 100.0 8.2E-38 1.8E-42 337.4 20.9 195 560-764 6-218 (317)
238 cd05034 PTKc_Src_like Catalyti 100.0 9.8E-38 2.1E-42 326.9 20.9 255 554-831 5-260 (261)
239 cd08221 STKc_Nek9 Catalytic do 100.0 9.3E-38 2E-42 326.1 20.5 252 557-829 2-254 (256)
240 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 4.4E-38 9.5E-43 328.8 17.3 240 561-830 1-258 (258)
241 cd08218 STKc_Nek1 Catalytic do 100.0 9E-38 2E-42 326.2 19.3 251 557-828 2-253 (256)
242 cd07847 STKc_CDKL1_4 Catalytic 100.0 9.4E-38 2E-42 331.8 19.7 264 556-828 2-283 (286)
243 cd05110 PTKc_HER4 Catalytic do 100.0 8.4E-38 1.8E-42 334.7 19.4 257 554-832 6-268 (303)
244 PHA03209 serine/threonine kina 100.0 2.2E-38 4.9E-43 346.5 15.1 193 552-762 63-256 (357)
245 cd05041 PTKc_Fes_like Catalyti 100.0 1.8E-37 3.9E-42 322.9 21.0 250 561-831 1-251 (251)
246 cd07860 STKc_CDK2_3 Catalytic 100.0 7.4E-38 1.6E-42 332.2 18.2 264 556-828 1-281 (284)
247 cd06651 STKc_MEKK3 Catalytic d 100.0 1.5E-37 3.2E-42 326.5 20.2 254 556-828 3-261 (266)
248 cd05056 PTKc_FAK Catalytic dom 100.0 1.9E-37 4E-42 326.5 20.9 256 555-833 6-266 (270)
249 cd06609 STKc_MST3_like Catalyt 100.0 1.3E-37 2.8E-42 328.5 19.6 249 556-828 2-251 (274)
250 cd05112 PTKc_Itk Catalytic dom 100.0 2.6E-37 5.6E-42 322.7 21.7 251 556-830 5-256 (256)
251 cd05083 PTKc_Chk Catalytic dom 100.0 2.2E-37 4.7E-42 322.8 21.0 247 555-831 6-253 (254)
252 cd06644 STKc_STK10_LOK Catalyt 100.0 1.7E-37 3.7E-42 330.7 20.3 252 555-828 12-269 (292)
253 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 5.6E-38 1.2E-42 333.1 16.3 270 555-833 4-284 (284)
254 cd05057 PTKc_EGFR_like Catalyt 100.0 3.1E-37 6.7E-42 326.5 21.8 256 555-832 7-268 (279)
255 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.6E-37 3.4E-42 326.5 19.3 258 556-828 2-264 (267)
256 cd06628 STKc_MAPKKK_Byr2_like 100.0 2.3E-37 5.1E-42 325.2 20.6 253 557-828 2-264 (267)
257 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.9E-37 4E-42 327.1 19.9 258 557-833 1-273 (273)
258 cd06658 STKc_PAK5 Catalytic do 100.0 4.2E-38 9.2E-43 334.9 15.0 249 556-828 23-272 (292)
259 cd07846 STKc_CDKL2_3 Catalytic 100.0 9.4E-38 2E-42 331.8 17.7 264 556-828 2-283 (286)
260 PF00069 Pkinase: Protein kina 100.0 3.3E-38 7.2E-43 330.2 14.0 253 557-828 1-257 (260)
261 cd07839 STKc_CDK5 Catalytic do 100.0 5.3E-38 1.2E-42 333.3 15.7 263 557-828 2-281 (284)
262 cd06640 STKc_MST4 Catalytic do 100.0 2.4E-37 5.3E-42 326.9 20.5 249 555-828 4-253 (277)
263 cd06611 STKc_SLK_like Catalyti 100.0 9E-38 1.9E-42 330.8 17.3 252 555-828 5-262 (280)
264 cd06629 STKc_MAPKKK_Bck1_like 100.0 2.2E-37 4.8E-42 326.4 19.8 258 557-828 3-269 (272)
265 cd06638 STKc_myosinIIIA Cataly 100.0 1.8E-37 3.9E-42 329.6 19.2 256 552-829 15-284 (286)
266 KOG4645 MAPKKK (MAP kinase kin 100.0 3.4E-39 7.5E-44 366.2 6.1 251 558-828 1238-1494(1509)
267 cd07844 STKc_PCTAIRE_like Cata 100.0 2E-37 4.3E-42 330.2 19.1 264 555-828 5-288 (291)
268 cd08220 STKc_Nek8 Catalytic do 100.0 3.2E-37 7E-42 321.9 20.2 250 557-828 2-253 (256)
269 cd07870 STKc_PFTAIRE2 Catalyti 100.0 2E-37 4.3E-42 330.1 18.8 265 554-828 4-288 (291)
270 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 3.4E-37 7.5E-42 322.3 20.2 238 561-830 1-259 (259)
271 cd06613 STKc_MAP4K3_like Catal 100.0 4.1E-37 8.8E-42 322.4 20.8 254 555-828 3-260 (262)
272 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 2.5E-37 5.3E-42 328.6 19.0 253 556-828 2-262 (286)
273 KOG0586 Serine/threonine prote 100.0 5.5E-38 1.2E-42 334.2 13.8 250 554-828 55-306 (596)
274 cd06659 STKc_PAK6 Catalytic do 100.0 8.1E-38 1.7E-42 333.6 15.0 245 560-828 26-271 (297)
275 cd05574 STKc_phototropin_like 100.0 2.7E-37 5.9E-42 333.1 19.1 256 556-828 2-289 (316)
276 cd05046 PTK_CCK4 Pseudokinase 100.0 4.2E-37 9.1E-42 324.8 19.9 257 555-831 5-275 (275)
277 cd06652 STKc_MEKK2 Catalytic d 100.0 4E-37 8.7E-42 323.0 19.6 254 556-828 3-261 (265)
278 KOG0690 Serine/threonine prote 100.0 2E-38 4.4E-43 309.6 8.7 253 553-828 166-424 (516)
279 cd06607 STKc_TAO Catalytic dom 100.0 4.5E-37 9.7E-42 329.9 20.1 249 555-828 15-267 (307)
280 cd07867 STKc_CDC2L6 Catalytic 100.0 5.3E-37 1.1E-41 331.2 20.7 194 561-764 7-218 (317)
281 cd06636 STKc_MAP4K4_6 Catalyti 100.0 3.6E-37 7.8E-42 326.6 19.0 254 552-828 13-279 (282)
282 KOG0604 MAP kinase-activated p 100.0 4.1E-38 9E-43 304.9 10.3 254 553-828 59-322 (400)
283 cd08528 STKc_Nek10 Catalytic d 100.0 7.1E-37 1.5E-41 321.9 20.7 258 556-831 1-269 (269)
284 cd05609 STKc_MAST Catalytic do 100.0 3.2E-37 6.9E-42 330.7 18.3 257 556-830 2-272 (305)
285 cd06632 STKc_MEKK1_plant Catal 100.0 4.3E-37 9.3E-42 321.4 18.7 251 557-828 2-255 (258)
286 cd07841 STKc_CDK7 Catalytic do 100.0 6.2E-37 1.3E-41 327.6 20.2 265 557-828 2-282 (298)
287 cd06639 STKc_myosinIIIB Cataly 100.0 4.5E-37 9.8E-42 327.3 19.0 255 552-828 19-287 (291)
288 cd07835 STKc_CDK1_like Catalyt 100.0 3.2E-37 7E-42 327.1 17.7 264 557-828 1-280 (283)
289 cd05580 STKc_PKA Catalytic dom 100.0 6.1E-37 1.3E-41 326.1 19.7 247 556-828 2-254 (290)
290 cd07832 STKc_CCRK Catalytic do 100.0 5.5E-37 1.2E-41 325.9 19.3 264 557-828 2-282 (286)
291 cd06647 STKc_PAK_I Catalytic d 100.0 5.4E-37 1.2E-41 326.7 19.2 250 555-828 19-269 (293)
292 cd08225 STKc_Nek5 Catalytic do 100.0 4.7E-37 1E-41 320.9 18.2 251 557-828 2-254 (257)
293 cd06641 STKc_MST3 Catalytic do 100.0 9.7E-37 2.1E-41 322.3 20.8 249 555-828 4-253 (277)
294 KOG0983 Mitogen-activated prot 100.0 2.3E-38 5E-43 302.6 7.5 249 559-828 96-349 (391)
295 cd05633 STKc_GRK3 Catalytic do 100.0 3.2E-37 7E-42 325.9 16.8 244 562-828 1-255 (279)
296 cd06605 PKc_MAPKK Catalytic do 100.0 3.4E-37 7.4E-42 323.6 16.7 250 556-828 2-257 (265)
297 cd07833 STKc_CDKL Catalytic do 100.0 5.1E-37 1.1E-41 326.5 17.9 265 556-828 2-285 (288)
298 cd06608 STKc_myosinIII_like Ca 100.0 9.9E-37 2.2E-41 321.8 20.0 255 552-828 3-272 (275)
299 cd08217 STKc_Nek2 Catalytic do 100.0 8E-37 1.7E-41 320.6 19.1 255 556-828 1-262 (265)
300 cd06617 PKc_MKK3_6 Catalytic d 100.0 5.9E-37 1.3E-41 325.2 18.1 251 556-828 2-261 (283)
301 KOG1025 Epidermal growth facto 100.0 9.4E-38 2E-42 338.0 11.6 253 557-831 698-956 (1177)
302 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 7E-37 1.5E-41 325.1 18.0 256 556-828 2-266 (287)
303 cd06648 STKc_PAK_II Catalytic 100.0 1.2E-36 2.7E-41 322.7 19.7 248 557-828 21-269 (285)
304 cd06630 STKc_MEKK1 Catalytic d 100.0 1.2E-36 2.5E-41 320.1 19.3 255 557-828 2-264 (268)
305 cd07837 STKc_CdkB_plant Cataly 100.0 8.9E-37 1.9E-41 325.8 18.4 265 556-828 2-291 (295)
306 smart00219 TyrKc Tyrosine kina 100.0 2E-36 4.4E-41 316.2 20.7 251 558-829 2-258 (258)
307 cd05577 STKc_GRK Catalytic dom 100.0 6.8E-37 1.5E-41 323.4 17.1 248 563-828 1-254 (277)
308 cd06616 PKc_MKK4 Catalytic dom 100.0 5.1E-37 1.1E-41 326.5 16.2 255 556-828 5-267 (288)
309 cd06635 STKc_TAO1 Catalytic do 100.0 2.2E-36 4.8E-41 325.9 21.2 250 555-829 25-278 (317)
310 KOG4257 Focal adhesion tyrosin 100.0 2.9E-37 6.3E-42 324.7 13.7 252 558-832 392-649 (974)
311 cd06917 STKc_NAK1_like Catalyt 100.0 1.3E-36 2.8E-41 321.4 18.9 249 556-828 2-255 (277)
312 cd07849 STKc_ERK1_2_like Catal 100.0 7.4E-37 1.6E-41 332.4 17.1 265 554-828 4-292 (336)
313 PLN00009 cyclin-dependent kina 100.0 1.1E-36 2.4E-41 324.9 18.1 265 556-828 3-284 (294)
314 cd06626 STKc_MEKK4 Catalytic d 100.0 2.3E-36 5E-41 317.1 20.2 254 557-828 2-261 (264)
315 cd07831 STKc_MOK Catalytic dom 100.0 2.5E-36 5.4E-41 320.1 20.3 260 557-828 1-279 (282)
316 cd05578 STKc_Yank1 Catalytic d 100.0 1.2E-36 2.5E-41 318.2 17.5 249 557-827 2-254 (258)
317 cd06614 STKc_PAK Catalytic dom 100.0 2.4E-36 5.3E-41 320.9 20.1 253 553-828 17-270 (286)
318 KOG2052 Activin A type IB rece 100.0 6.9E-36 1.5E-40 304.9 22.3 263 553-832 209-503 (513)
319 cd06623 PKc_MAPKK_plant_like C 100.0 2.3E-36 5.1E-41 317.0 19.6 251 556-828 2-256 (264)
320 KOG0612 Rho-associated, coiled 100.0 5.7E-38 1.2E-42 351.9 7.5 256 554-828 74-338 (1317)
321 cd07845 STKc_CDK10 Catalytic d 100.0 2.5E-36 5.3E-41 324.5 19.9 265 555-828 7-290 (309)
322 cd07843 STKc_CDC2L1 Catalytic 100.0 2E-36 4.4E-41 322.7 18.9 265 555-828 5-290 (293)
323 cd07850 STKc_JNK Catalytic dom 100.0 1.7E-36 3.8E-41 331.7 18.9 263 553-828 14-311 (353)
324 cd07855 STKc_ERK5 Catalytic do 100.0 1.5E-36 3.2E-41 329.7 18.1 267 554-828 4-294 (334)
325 cd07852 STKc_MAPK15 Catalytic 100.0 1.8E-36 3.9E-41 329.6 18.3 268 552-828 4-295 (337)
326 KOG1035 eIF-2alpha kinase GCN2 100.0 2.9E-37 6.2E-42 349.2 12.1 256 552-827 476-870 (1351)
327 cd06657 STKc_PAK4 Catalytic do 100.0 1.2E-36 2.5E-41 323.7 16.2 245 560-828 25-270 (292)
328 cd05606 STKc_beta_ARK Catalyti 100.0 1.9E-36 4.1E-41 320.0 17.1 244 562-828 1-255 (278)
329 cd08226 PK_STRAD_beta Pseudoki 100.0 4.8E-36 1E-40 324.9 20.6 261 561-828 4-308 (328)
330 cd07838 STKc_CDK4_6_like Catal 100.0 6.9E-36 1.5E-40 317.6 21.4 263 557-828 1-284 (287)
331 cd07842 STKc_CDK8_like Catalyt 100.0 2.1E-36 4.5E-41 326.4 17.6 267 557-828 2-313 (316)
332 cd08216 PK_STRAD Pseudokinase 100.0 6.1E-36 1.3E-40 322.4 20.8 261 562-828 9-295 (314)
333 cd07836 STKc_Pho85 Catalytic d 100.0 3.6E-36 7.8E-41 319.3 18.4 264 556-828 1-281 (284)
334 cd05572 STKc_cGK_PKG Catalytic 100.0 2.8E-36 6.1E-41 316.0 17.2 245 563-828 1-252 (262)
335 KOG0607 MAP kinase-interacting 100.0 2.9E-37 6.2E-42 301.2 8.5 259 561-828 84-361 (463)
336 cd07865 STKc_CDK9 Catalytic do 100.0 5.7E-36 1.2E-40 322.1 19.6 267 555-828 12-307 (310)
337 KOG0666 Cyclin C-dependent kin 100.0 5.1E-37 1.1E-41 298.5 10.0 267 555-828 24-337 (438)
338 KOG0199 ACK and related non-re 100.0 7.7E-37 1.7E-41 325.6 12.1 248 560-828 115-368 (1039)
339 cd07864 STKc_CDK12 Catalytic d 100.0 7.4E-36 1.6E-40 319.9 19.4 269 552-828 4-299 (302)
340 cd05122 PKc_STE Catalytic doma 100.0 1.3E-35 2.8E-40 308.8 20.7 250 556-828 1-251 (253)
341 cd05613 STKc_MSK1_N N-terminal 100.0 3.5E-36 7.6E-41 320.4 16.6 252 557-828 2-268 (290)
342 cd05611 STKc_Rim15_like Cataly 100.0 8.9E-36 1.9E-40 311.9 19.4 244 561-827 2-247 (260)
343 KOG4250 TANK binding protein k 100.0 1.1E-36 2.4E-41 328.3 12.2 197 559-764 17-226 (732)
344 cd05118 STKc_CMGC Catalytic do 100.0 1.2E-35 2.5E-40 315.2 19.8 263 557-828 1-280 (283)
345 cd07830 STKc_MAK_like Catalyti 100.0 1E-35 2.2E-40 315.7 19.2 262 557-828 1-280 (283)
346 cd06606 STKc_MAPKKK Catalytic 100.0 1.5E-35 3.3E-40 309.7 20.1 253 557-828 2-257 (260)
347 KOG1006 Mitogen-activated prot 100.0 2.9E-38 6.2E-43 301.1 -0.6 251 560-827 69-326 (361)
348 cd06634 STKc_TAO2 Catalytic do 100.0 1.5E-35 3.2E-40 318.0 20.2 251 554-829 14-268 (308)
349 cd06618 PKc_MKK7 Catalytic dom 100.0 1.1E-35 2.3E-40 317.5 18.9 253 555-828 15-273 (296)
350 KOG0696 Serine/threonine prote 100.0 9E-37 1.9E-41 306.6 9.8 245 554-821 348-594 (683)
351 cd07858 STKc_TEY_MAPK_plant Ca 100.0 6E-36 1.3E-40 325.3 16.8 264 555-828 5-291 (337)
352 cd05583 STKc_MSK_N N-terminal 100.0 4.1E-36 9E-41 319.4 15.2 254 557-830 2-265 (288)
353 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.7E-35 3.8E-40 310.4 19.7 254 556-828 3-261 (264)
354 cd05579 STKc_MAST_like Catalyt 100.0 1.2E-35 2.6E-40 311.7 17.9 248 563-829 1-255 (265)
355 cd06633 STKc_TAO3 Catalytic do 100.0 2.8E-35 6E-40 316.6 20.8 247 557-828 23-273 (313)
356 PHA03210 serine/threonine kina 100.0 6.7E-36 1.5E-40 339.7 16.4 272 552-828 145-454 (501)
357 PHA02882 putative serine/threo 100.0 1.1E-35 2.4E-40 316.7 17.0 262 555-829 12-293 (294)
358 cd07840 STKc_CDK9_like Catalyt 100.0 3.3E-35 7E-40 312.4 20.6 264 557-828 1-284 (287)
359 cd06627 STKc_Cdc7_like Catalyt 100.0 3.6E-35 7.9E-40 306.0 20.4 249 557-828 2-251 (254)
360 KOG4236 Serine/threonine prote 100.0 1E-36 2.2E-41 314.7 8.0 247 560-828 569-819 (888)
361 PHA03390 pk1 serine/threonine- 100.0 4.4E-35 9.6E-40 307.5 20.7 242 552-828 11-262 (267)
362 cd05581 STKc_PDK1 Catalytic do 100.0 1.4E-35 3.1E-40 313.9 16.7 252 556-828 2-277 (280)
363 cd07879 STKc_p38delta_MAPK13 C 100.0 1.2E-35 2.6E-40 323.5 16.4 260 554-828 14-297 (342)
364 PTZ00024 cyclin-dependent prot 100.0 2.8E-35 6.1E-40 320.1 19.2 264 559-828 13-313 (335)
365 cd07866 STKc_BUR1 Catalytic do 100.0 2.2E-35 4.7E-40 317.7 17.8 268 554-828 7-308 (311)
366 cd08530 STKc_CNK2-like Catalyt 100.0 2.6E-35 5.6E-40 307.5 17.8 249 557-828 2-253 (256)
367 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.8E-35 4E-40 319.7 17.1 263 552-828 7-288 (328)
368 cd07834 STKc_MAPK Catalytic do 100.0 3.2E-35 6.9E-40 319.1 19.0 264 557-828 2-289 (330)
369 cd07877 STKc_p38alpha_MAPK14 C 100.0 2.6E-35 5.7E-40 321.0 18.4 263 552-828 14-300 (345)
370 cd08215 STKc_Nek Catalytic dom 100.0 5.3E-35 1.1E-39 305.4 19.8 251 557-828 2-255 (258)
371 cd07880 STKc_p38gamma_MAPK12 C 100.0 2.2E-35 4.8E-40 321.4 16.6 262 553-828 13-298 (343)
372 cd08222 STKc_Nek11 Catalytic d 100.0 5.3E-35 1.1E-39 306.0 18.2 252 557-828 2-257 (260)
373 cd07851 STKc_p38 Catalytic dom 100.0 2.6E-35 5.5E-40 321.0 15.5 262 553-828 13-298 (343)
374 KOG0587 Traf2- and Nck-interac 100.0 3.3E-35 7.2E-40 322.6 15.9 253 554-828 18-282 (953)
375 cd07854 STKc_MAPK4_6 Catalytic 100.0 4E-35 8.7E-40 319.3 16.5 263 555-828 5-300 (342)
376 cd07857 STKc_MPK1 Catalytic do 100.0 1E-34 2.2E-39 315.0 19.2 264 557-828 2-292 (332)
377 cd07829 STKc_CDK_like Catalyti 100.0 1E-34 2.2E-39 307.8 18.5 263 557-828 1-279 (282)
378 cd05610 STKc_MASTL Catalytic d 100.0 4.8E-35 1E-39 342.9 17.6 148 555-708 4-152 (669)
379 KOG0662 Cyclin-dependent kinas 100.0 2.6E-35 5.6E-40 264.5 11.4 263 556-828 3-283 (292)
380 KOG0669 Cyclin T-dependent kin 100.0 2.2E-36 4.7E-41 285.7 3.9 265 556-828 18-315 (376)
381 cd05123 STKc_AGC Catalytic dom 100.0 2.2E-34 4.7E-39 299.4 19.0 242 563-827 1-246 (250)
382 KOG0472 Leucine-rich repeat pr 100.0 1.2E-38 2.6E-43 319.8 -12.4 419 10-446 47-541 (565)
383 cd05576 STKc_RPK118_like Catal 100.0 2.6E-34 5.6E-39 296.1 15.6 219 566-822 4-223 (237)
384 KOG0200 Fibroblast/platelet-de 100.0 9.4E-34 2E-38 326.7 19.4 256 556-831 297-578 (609)
385 KOG0603 Ribosomal protein S6 k 100.0 1.7E-34 3.8E-39 309.3 12.1 241 553-828 320-563 (612)
386 KOG1151 Tousled-like protein k 100.0 1.1E-34 2.5E-39 293.7 9.8 260 555-827 463-740 (775)
387 KOG0671 LAMMER dual specificit 100.0 9.9E-35 2.1E-39 291.7 8.4 263 552-828 86-406 (415)
388 KOG0695 Serine/threonine prote 100.0 3.2E-34 6.9E-39 281.1 10.6 246 555-821 250-503 (593)
389 KOG0614 cGMP-dependent protein 100.0 8.1E-35 1.8E-39 300.0 5.2 251 556-828 421-677 (732)
390 KOG0608 Warts/lats-like serine 100.0 4.6E-34 1E-38 301.0 10.5 204 557-766 631-875 (1034)
391 PLN03224 probable serine/threo 100.0 3.1E-33 6.8E-38 310.3 17.1 269 554-828 144-500 (507)
392 KOG0984 Mitogen-activated prot 100.0 2.6E-33 5.6E-38 257.7 9.6 211 555-774 46-264 (282)
393 PLN03225 Serine/threonine-prot 100.0 1E-32 2.2E-37 314.9 15.3 262 553-828 130-450 (566)
394 KOG1027 Serine/threonine prote 100.0 1.3E-33 2.8E-38 308.8 7.1 246 557-828 511-767 (903)
395 smart00220 S_TKc Serine/Threon 100.0 6.7E-32 1.4E-36 279.0 19.6 240 567-828 1-241 (244)
396 KOG0472 Leucine-rich repeat pr 100.0 1.1E-36 2.3E-41 305.9 -15.6 411 4-428 64-546 (565)
397 KOG1024 Receptor-like protein 100.0 5.4E-32 1.2E-36 271.1 12.4 258 554-831 283-554 (563)
398 KOG0665 Jun-N-terminal kinase 100.0 2.6E-32 5.6E-37 268.0 9.0 258 557-828 19-310 (369)
399 KOG0618 Serine/threonine phosp 100.0 4.5E-34 9.8E-39 315.0 -3.9 416 10-444 23-487 (1081)
400 KOG0668 Casein kinase II, alph 100.0 2.8E-32 6.2E-37 254.5 8.3 256 555-828 38-322 (338)
401 KOG0444 Cytoskeletal regulator 100.0 9.3E-34 2E-38 298.1 -2.5 341 4-374 3-350 (1255)
402 KOG0664 Nemo-like MAPK-related 100.0 5.9E-33 1.3E-37 265.2 1.9 262 559-829 57-344 (449)
403 KOG0444 Cytoskeletal regulator 100.0 2.4E-33 5.2E-38 295.1 -4.9 367 29-450 6-379 (1255)
404 KOG0576 Mitogen-activated prot 100.0 3.8E-31 8.2E-36 281.9 5.5 252 555-827 15-270 (829)
405 KOG0618 Serine/threonine phosp 100.0 1.8E-32 3.9E-37 302.5 -8.1 420 9-443 46-510 (1081)
406 cd00180 PKc Catalytic domain o 100.0 1.5E-28 3.2E-33 247.9 19.2 212 563-829 1-215 (215)
407 KOG1152 Signal transduction se 100.0 5E-30 1.1E-34 268.9 8.3 199 555-763 561-770 (772)
408 KOG0670 U4/U6-associated splic 100.0 2.2E-29 4.7E-34 260.7 8.8 268 548-828 425-746 (752)
409 KOG4237 Extracellular matrix p 100.0 1.8E-30 3.9E-35 261.2 -2.2 415 11-443 49-498 (498)
410 smart00221 STYKc Protein kinas 100.0 2.6E-27 5.6E-32 241.7 18.8 200 557-764 1-202 (225)
411 KOG1345 Serine/threonine kinas 99.9 5.5E-28 1.2E-32 231.5 9.6 251 552-829 21-285 (378)
412 KOG1167 Serine/threonine prote 99.9 6.6E-28 1.4E-32 246.3 10.2 263 552-828 33-381 (418)
413 PLN00181 protein SPA1-RELATED; 99.9 2.8E-28 6.1E-33 293.4 8.8 197 611-828 28-265 (793)
414 KOG1290 Serine/threonine prote 99.9 4.3E-27 9.3E-32 242.9 12.9 132 555-694 78-222 (590)
415 smart00750 KIND kinase non-cat 99.9 1.4E-26 3E-31 226.7 13.7 166 640-831 1-168 (176)
416 KOG4237 Extracellular matrix p 99.9 4.8E-28 1E-32 243.8 -5.4 397 9-419 68-498 (498)
417 KOG0195 Integrin-linked kinase 99.9 7.9E-26 1.7E-30 216.5 7.0 247 561-833 196-447 (448)
418 PLN03210 Resistant to P. syrin 99.9 1.8E-23 3.8E-28 259.3 27.6 353 9-374 533-904 (1153)
419 PRK09188 serine/threonine prot 99.9 7.8E-25 1.7E-29 233.2 12.2 170 552-736 15-194 (365)
420 PLN03210 Resistant to P. syrin 99.9 8.3E-23 1.8E-27 253.3 27.9 347 45-444 549-904 (1153)
421 PRK15387 E3 ubiquitin-protein 99.9 7.6E-23 1.6E-27 234.9 19.5 268 8-338 201-468 (788)
422 COG0515 SPS1 Serine/threonine 99.9 1.7E-22 3.7E-27 219.5 20.6 260 557-828 2-275 (384)
423 KOG0590 Checkpoint kinase and 99.9 2.5E-24 5.5E-29 244.7 5.8 258 558-827 321-584 (601)
424 PRK15387 E3 ubiquitin-protein 99.9 3.5E-22 7.5E-27 229.6 17.3 268 30-362 201-468 (788)
425 KOG1164 Casein kinase (serine/ 99.9 4.3E-21 9.4E-26 206.0 17.0 258 556-831 19-296 (322)
426 PRK15370 E3 ubiquitin-protein 99.9 1E-21 2.2E-26 227.5 12.8 247 8-304 178-428 (754)
427 cd05147 RIO1_euk RIO kinase fa 99.9 1.5E-21 3.1E-26 191.7 11.2 144 560-710 2-167 (190)
428 KOG1023 Natriuretic peptide re 99.8 2.6E-21 5.7E-26 209.2 11.2 213 609-832 1-224 (484)
429 KOG0603 Ribosomal protein S6 k 99.8 1.6E-22 3.5E-27 217.6 1.3 227 562-822 1-232 (612)
430 PRK10359 lipopolysaccharide co 99.8 2.3E-21 5.1E-26 191.5 7.6 176 551-756 27-216 (232)
431 PRK15370 E3 ubiquitin-protein 99.8 1.2E-20 2.5E-25 218.7 13.0 278 31-367 179-461 (754)
432 cd05145 RIO1_like RIO kinase f 99.8 1.8E-20 3.9E-25 185.0 12.4 143 560-711 2-168 (190)
433 PRK12274 serine/threonine prot 99.8 2E-20 4.4E-25 180.4 11.7 190 558-764 5-209 (218)
434 KOG1240 Protein kinase contain 99.8 9E-22 2E-26 221.5 1.3 250 556-829 24-292 (1431)
435 PRK10345 hypothetical protein; 99.8 3.3E-19 7.1E-24 176.3 12.0 136 558-707 5-156 (210)
436 PF14531 Kinase-like: Kinase-l 99.8 3.5E-19 7.5E-24 181.5 11.2 232 559-819 16-288 (288)
437 KOG1163 Casein kinase (serine/ 99.8 1.4E-19 3.1E-24 171.2 7.3 200 554-764 14-223 (341)
438 KOG1033 eIF-2alpha kinase PEK/ 99.7 5E-19 1.1E-23 187.3 4.3 176 629-827 330-511 (516)
439 KOG1165 Casein kinase (serine/ 99.7 6.5E-18 1.4E-22 167.4 11.4 198 556-764 29-238 (449)
440 KOG0606 Microtubule-associated 99.7 6.5E-19 1.4E-23 198.9 4.3 211 552-820 80-304 (1205)
441 KOG4158 BRPK/PTEN-induced prot 99.7 4.4E-18 9.6E-23 172.1 9.7 197 613-829 274-511 (598)
442 smart00090 RIO RIO-like kinase 99.7 7.2E-18 1.6E-22 171.3 11.0 146 557-710 30-198 (237)
443 PRK14879 serine/threonine prot 99.7 9.5E-18 2E-22 169.3 11.5 138 561-709 2-143 (211)
444 cd00116 LRR_RI Leucine-rich re 99.7 3E-19 6.5E-24 192.8 -2.3 128 12-139 2-150 (319)
445 TIGR03724 arch_bud32 Kae1-asso 99.7 1.9E-17 4.1E-22 165.4 10.5 134 562-709 1-138 (199)
446 cd00116 LRR_RI Leucine-rich re 99.7 4E-19 8.8E-24 191.8 -1.8 106 34-139 2-121 (319)
447 PRK09605 bifunctional UGMP fam 99.7 2.5E-17 5.5E-22 189.1 12.3 140 556-710 334-477 (535)
448 cd05144 RIO2_C RIO kinase fami 99.7 2.8E-17 6E-22 163.8 10.8 140 557-711 17-176 (198)
449 KOG1166 Mitotic checkpoint ser 99.7 2.7E-17 5.8E-22 190.4 12.1 196 553-760 696-901 (974)
450 KOG0617 Ras suppressor protein 99.7 3.6E-19 7.8E-24 159.8 -4.6 157 24-185 27-186 (264)
451 KOG0617 Ras suppressor protein 99.7 2.1E-18 4.5E-23 154.9 -4.4 154 6-163 31-186 (264)
452 KOG0590 Checkpoint kinase and 99.6 3.3E-17 7.3E-22 186.7 2.0 257 556-827 21-285 (601)
453 cd05120 APH_ChoK_like Aminogly 99.6 6.3E-16 1.4E-20 147.0 9.9 135 560-710 3-139 (155)
454 cd05119 RIO RIO kinase family, 99.6 1.4E-15 3E-20 150.3 10.9 140 560-711 2-165 (187)
455 PRK01723 3-deoxy-D-manno-octul 99.6 6.5E-15 1.4E-19 150.1 11.5 140 560-710 36-192 (239)
456 KOG1266 Protein kinase [Signal 99.5 2.4E-15 5.2E-20 149.2 1.6 204 607-829 119-332 (458)
457 TIGR01982 UbiB 2-polyprenylphe 99.5 1.4E-13 3.1E-18 152.5 12.0 146 560-712 122-309 (437)
458 KOG0532 Leucine-rich repeat (L 99.4 7E-15 1.5E-19 155.9 -5.8 195 12-215 54-252 (722)
459 KOG0601 Cyclin-dependent kinas 99.4 1.1E-12 2.5E-17 142.4 9.2 252 554-827 113-378 (524)
460 PRK04750 ubiB putative ubiquin 99.3 4.4E-12 9.6E-17 141.9 10.1 148 554-712 119-316 (537)
461 PLN03150 hypothetical protein; 99.3 7.3E-12 1.6E-16 145.5 11.7 90 341-430 420-511 (623)
462 PF14580 LRR_9: Leucine-rich r 99.3 1E-12 2.2E-17 124.8 3.4 122 14-140 3-127 (175)
463 COG4886 Leucine-rich repeat (L 99.3 4E-12 8.7E-17 141.3 8.2 195 12-213 97-294 (394)
464 COG4886 Leucine-rich repeat (L 99.3 7.6E-12 1.6E-16 139.1 9.6 178 78-286 116-296 (394)
465 PF14580 LRR_9: Leucine-rich r 99.3 1.3E-12 2.9E-17 124.0 2.4 127 5-133 16-147 (175)
466 KOG0601 Cyclin-dependent kinas 99.3 2.5E-12 5.4E-17 139.8 4.5 249 553-831 263-517 (524)
467 cd05151 ChoK Choline Kinase (C 99.3 1.4E-11 3E-16 119.6 8.9 131 561-709 4-136 (170)
468 KOG0606 Microtubule-associated 99.2 3.6E-12 7.8E-17 145.1 2.8 250 556-823 805-1084(1205)
469 KOG0532 Leucine-rich repeat (L 99.2 5E-13 1.1E-17 142.0 -4.3 182 241-430 73-254 (722)
470 KOG0531 Protein phosphatase 1, 99.2 2.7E-12 5.9E-17 142.8 0.1 244 7-284 71-322 (414)
471 PLN03150 hypothetical protein; 99.2 3.7E-11 8E-16 139.7 8.9 108 56-163 420-528 (623)
472 cd05146 RIO3_euk RIO kinase fa 99.1 3.5E-10 7.6E-15 109.8 11.7 139 561-710 3-174 (197)
473 KOG1259 Nischarin, modulator o 99.1 4.2E-12 9.2E-17 124.6 -1.9 129 7-140 283-413 (490)
474 KOG0531 Protein phosphatase 1, 99.1 8E-12 1.7E-16 139.0 -0.1 220 28-280 70-290 (414)
475 cd05154 ACAD10_11_like Acyl-Co 99.1 4.2E-10 9.1E-15 114.4 12.1 143 561-709 4-206 (223)
476 KOG1243 Protein kinase [Genera 99.0 1.6E-09 3.6E-14 119.0 12.4 166 576-758 34-199 (690)
477 PF13855 LRR_8: Leucine rich r 99.0 2E-10 4.4E-15 89.8 2.9 59 31-89 2-60 (61)
478 COG3642 Mn2+-dependent serine/ 99.0 3.6E-09 7.8E-14 98.6 10.2 135 561-709 2-140 (204)
479 PF13855 LRR_8: Leucine rich r 98.9 4.7E-10 1E-14 87.7 3.3 59 55-113 2-60 (61)
480 KOG1259 Nischarin, modulator o 98.9 9.3E-11 2E-15 115.3 -0.8 130 30-165 284-414 (490)
481 KOG3087 Serine/threonine prote 98.9 7.8E-09 1.7E-13 95.7 11.2 147 559-709 11-165 (229)
482 KOG4658 Apoptotic ATPase [Sign 98.9 5E-10 1.1E-14 132.8 4.4 202 6-209 521-730 (889)
483 KOG3207 Beta-tubulin folding c 98.9 1.7E-10 3.6E-15 119.6 -1.3 210 27-258 118-341 (505)
484 KOG3207 Beta-tubulin folding c 98.9 2.2E-10 4.7E-15 118.8 -0.5 159 5-163 118-284 (505)
485 KOG1909 Ran GTPase-activating 98.8 3.3E-10 7.2E-15 114.4 -2.2 41 122-162 88-132 (382)
486 KOG3741 Poly(A) ribonuclease s 98.8 1.5E-07 3.2E-12 100.4 16.2 167 568-760 289-474 (655)
487 PRK15123 lipopolysaccharide co 98.8 5.1E-08 1.1E-12 100.4 12.5 145 561-709 28-194 (268)
488 KOG1909 Ran GTPase-activating 98.8 1.1E-09 2.4E-14 110.7 0.1 191 238-446 87-311 (382)
489 PF01163 RIO1: RIO1 family; I 98.7 5.5E-08 1.2E-12 94.3 9.2 129 570-710 1-156 (188)
490 KOG0576 Mitogen-activated prot 98.7 3.9E-09 8.4E-14 114.9 1.1 183 560-763 247-431 (829)
491 KOG4658 Apoptotic ATPase [Sign 98.7 2.2E-08 4.9E-13 118.9 6.1 138 20-160 513-652 (889)
492 KOG2137 Protein kinase [Signal 98.6 1E-08 2.2E-13 113.3 2.2 151 664-827 106-264 (700)
493 KOG1859 Leucine-rich repeat pr 98.6 5.6E-10 1.2E-14 122.1 -8.6 128 7-139 163-292 (1096)
494 PRK09902 hypothetical protein; 98.5 8.6E-07 1.9E-11 86.2 11.7 141 564-709 27-179 (216)
495 COG0478 RIO-like serine/threon 98.5 6.4E-07 1.4E-11 88.9 9.3 134 559-707 95-249 (304)
496 KOG2982 Uncharacterized conser 98.4 5.3E-08 1.1E-12 96.3 -0.5 188 77-281 70-263 (418)
497 PF06293 Kdo: Lipopolysacchari 98.4 2.4E-06 5.2E-11 85.3 10.6 128 578-710 31-171 (206)
498 COG4248 Uncharacterized protei 98.3 5E-06 1.1E-10 86.7 12.5 254 559-832 15-300 (637)
499 COG0661 AarF Predicted unusual 98.3 1.8E-06 4E-11 96.4 9.5 146 561-712 131-317 (517)
500 KOG1859 Leucine-rich repeat pr 98.3 1.7E-08 3.6E-13 110.9 -6.7 57 80-139 166-222 (1096)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.9e-100 Score=945.21 Aligned_cols=791 Identities=31% Similarity=0.503 Sum_probs=559.9
Q ss_pred CCCCCCEEECCCCCCCC-cccccCCCCCCEEECCCCCCCCcccccccCCCCCCEEeCcCCcCCCCCCcccCCCCCCCEEE
Q 003296 6 GIDGLKLLNFSKNELVS-LPTFNGFAGLEVLDFSSNNLNGNINLQFDELVSLKSLNLSKNKFNGFLPINLGKTKALEELV 84 (833)
Q Consensus 6 ~l~~L~~L~ls~N~l~~-i~~f~~l~~L~~L~Ls~N~l~~~~~~~f~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 84 (833)
++++|++|+|++|.+++ +|. ..+++|++|||++|.+++..|..|+++++|++|+|++|.+.+..|..|+++++|++|+
T Consensus 116 ~l~~L~~L~Ls~n~l~~~~p~-~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 194 (968)
T PLN00113 116 TSSSLRYLNLSNNNFTGSIPR-GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLT 194 (968)
T ss_pred cCCCCCEEECcCCccccccCc-cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeee
Confidence 67788888888888876 443 5577777888887777777777777777788888877777777777777777777777
Q ss_pred ccCCcCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCcEEECcCCcCCCCCCcccccCCccCccccccccccc
Q 003296 85 LSGNAFHGEIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQNKFSG 164 (833)
Q Consensus 85 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~ 164 (833)
|++|.+.+.+|..++++++|+.|+|++|++++.+|..|+++++|++|+|++|.+++.+|..|.++++|+.|++++|++++
T Consensus 195 L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~ 274 (968)
T PLN00113 195 LASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSG 274 (968)
T ss_pred ccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeec
Confidence 77777777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred cCChhh--hhcCCEEecccccccccCCccCCCCCCCCEEecccccCcccCCCCCC--cCCcEEEcCCccccCCCCccccC
Q 003296 165 SVPGGI--TRFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMS--PNLVRLRLGTNLLIGEIPSATFT 240 (833)
Q Consensus 165 ~~p~~~--~~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~n~l~~~~~~~~f~ 240 (833)
.+|..+ ...|+.|+|++|++.+.+|..+..+++|+.|++++|.+.+.+|..+. ++|+.|++++|.+.+.+| ..+.
T Consensus 275 ~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p-~~l~ 353 (968)
T PLN00113 275 PIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIP-KNLG 353 (968)
T ss_pred cCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCC-hHHh
Confidence 777655 34577777777777777776666677777777777776666665443 566666666666554433 3445
Q ss_pred CCCCCCEEECCCCCCCCCCCccc------------------------cCCCCCcEEEccCCccCCCChhhhCCCCCCcEE
Q 003296 241 SLEKLTYLELDNNSFTGMIPQQL------------------------GSCRSLTLLNLAQNELNGSLPIQLGSLGILQVM 296 (833)
Q Consensus 241 ~l~~L~~L~L~~N~l~~~~~~~~------------------------~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 296 (833)
.+++|+.|+|++|++++..|..+ +.+++|+.|++++|++++..|..+..++.|+.|
T Consensus 354 ~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 433 (968)
T PLN00113 354 KHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFL 433 (968)
T ss_pred CCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEE
Confidence 55555555555555555555444 445555555555555555555555555555555
Q ss_pred EccCCcCCCcCchhhcCCCcCceeeccCCcCcccCccccccCCCCCEEEccCCccccccCccccCCCCCCEEEccCCcCC
Q 003296 297 NLQLNKLSGEIPSQFSQLKLLSTMNISWNSLSGSIPSFLSNLTNLVNLNLRQNNLNGSIPNSITNMRSLIELQLGGNQLS 376 (833)
Q Consensus 297 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 376 (833)
++++|.+++.+|..+..+++|+.|++++|++.+.+|..+ ..++|+.|++++|++++..|..|.++++|+.|+|++|++.
T Consensus 434 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 512 (968)
T PLN00113 434 DISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLS 512 (968)
T ss_pred ECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcce
Confidence 555555555555555555555666666666555555544 3466777777888888888888888888999999999988
Q ss_pred ccCCCCccccc--ceeeccccccccchhhhhccCCCCCEEecccCcCccccchhccCCCCCCeeeCcCCcccccCCCCCc
Q 003296 377 GTIPMMPPRLQ--IALNLSSNLFEGPIPTTFARLNGLEVLDLSNNRFSGEIPQLLAQMPTLTQLLLTNNQLSGVVPKFSK 454 (833)
Q Consensus 377 ~~~p~~~~~~~--~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~ 454 (833)
+.+|.....+. ..|++++|.+++.+|..|..+++|+.|||++|++++.+|..+..+++|+.+++++|+++|.+|....
T Consensus 513 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~ 592 (968)
T PLN00113 513 GEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGA 592 (968)
T ss_pred eeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcch
Confidence 88886655443 6799999999999999999999999999999999999999999999999999999999999998766
Q ss_pred ccccc---cCCCcccccccCCCC-Cc--ccccccceeehhhHHHHHHHHHHHHHHHHHhhhhhhccccccccccCCCCCC
Q 003296 455 WVSVD---TTGNLKLINVTAPDT-SP--EKRRKSVVVPIVIALAAAILAVGVVSIFVLSISRRFYRVKDEHLQLGEDISS 528 (833)
Q Consensus 455 ~~~~~---~~~n~~l~~~~~~~~-~~--~~~~~~~~~~i~i~i~~~~l~~~~~~~~~~~~~rr~~r~~~~~~~~~~~~~~ 528 (833)
+..+. ..||..+|+...+.. .+ ...+......++++++++++++++++++++++++| ++...+. .+. .
T Consensus 593 ~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~-~- 666 (968)
T PLN00113 593 FLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTPSWWFYITCTLGAFLVLALVAFGFVFIRGR-NNLELKR---VEN-E- 666 (968)
T ss_pred hcccChhhhcCCccccCCccccCCCCCccccccceeeeehhHHHHHHHHHHHHHHHHHHHHhh-hcccccc---ccc-c-
Confidence 55443 448999998543211 11 11111112222222222222222222222222211 1111000 000 0
Q ss_pred cccccccccccccccc---chhhHHHHHHHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHH
Q 003296 529 PQVIQGNLLTGNGIHR---SNIDFTKAMEAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDK 604 (833)
Q Consensus 529 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~ 604 (833)
...+....+.. ...... .....++..++||+|+||.||+|+. .+|..||||++.... ....+
T Consensus 667 -----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~ 732 (968)
T PLN00113 667 -----DGTWELQFFDSKVSKSITIN-DILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVN--------SIPSS 732 (968)
T ss_pred -----cccccccccccccchhhhHH-HHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCc--------cccHH
Confidence 00011000110 112222 3445678889999999999999997 589999999984211 12245
Q ss_pred HHHHHhcCCCCCcccceEEEecCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeec
Q 003296 605 ELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLL 684 (833)
Q Consensus 605 E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHr 684 (833)
|++++++++|||||+++|+|.+++..|+|||||++|+|.++++. ++|.++.+|+.|+|+|++|||+.++++|+||
T Consensus 733 ~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~ 807 (968)
T PLN00113 733 EIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN-----LSWERRRKIAIGIAKALRFLHCRCSPAVVVG 807 (968)
T ss_pred HHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc-----CCHHHHHHHHHHHHHHHHHhccCCCCCeecC
Confidence 78999999999999999999999999999999999999999974 8999999999999999999998878899999
Q ss_pred CCCccceeeCCCCCceeccceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccC
Q 003296 685 DLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQ 764 (833)
Q Consensus 685 dlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~ 764 (833)
|+||+||+++.++.+++. ||.+...... ....||++|||||++.+..++.|+|||||||++|||+||+.||+.
T Consensus 808 dlkp~Nil~~~~~~~~~~-~~~~~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~ 880 (968)
T PLN00113 808 NLSPEKIIIDGKDEPHLR-LSLPGLLCTD------TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADA 880 (968)
T ss_pred CCCHHhEEECCCCceEEE-eccccccccC------CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCc
Confidence 999999999999888875 6655433211 234689999999999999999999999999999999999999863
Q ss_pred ----CccHHHHHHHhhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 765 ----GNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 765 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
.....+|+...... .....++|+.+.........++.++.+++.+||+.||++||||+||+++|+++
T Consensus 881 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~ 951 (968)
T PLN00113 881 EFGVHGSIVEWARYCYSD-CHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESA 951 (968)
T ss_pred ccCCCCcHHHHHHHhcCc-cchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHh
Confidence 23456666543322 23344555555433333345677889999999999999999999999999875
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-57 Score=481.86 Aligned_cols=278 Identities=34% Similarity=0.556 Sum_probs=238.9
Q ss_pred hhHHHHHHHhcCCccccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEec
Q 003296 547 IDFTKAMEAVANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLA 626 (833)
Q Consensus 547 ~~~~~~~~~~~~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~ 626 (833)
.++. .||++|...+.||+|+||.||+|.+++|+.||||++..... .. .++|.+|++++++++|||+|+++|||.+
T Consensus 68 ~el~-~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~---~~-~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e 142 (361)
T KOG1187|consen 68 DELR-KATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSG---QG-EREFLNEVEILSRLRHPNLVKLLGYCLE 142 (361)
T ss_pred HHHH-HHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCC---cc-hhHHHHHHHHHhcCCCcCcccEEEEEec
Confidence 5565 99999999999999999999999999999999998842211 11 4679999999999999999999999999
Q ss_pred CC-ceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccce
Q 003296 627 SD-SAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIE 705 (833)
Q Consensus 627 ~~-~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfg 705 (833)
.+ +.+||||||++|+|.++|+......++|.+|++||.++|+||+|||+.+.++||||||||+|||||+++++||+|||
T Consensus 143 ~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFG 222 (361)
T KOG1187|consen 143 GGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFG 222 (361)
T ss_pred CCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCcc
Confidence 98 59999999999999999997533389999999999999999999999998899999999999999999999999999
Q ss_pred eeeeeCCCCCCCccccc-cccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccC-----CccHHHHHHHhhccc
Q 003296 706 LCKVIDPSKSTGSLSTV-AGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQ-----GNELAKWVLRNSAQQ 779 (833)
Q Consensus 706 l~~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~-----~~~~~~~~~~~~~~~ 779 (833)
+|+...... . ...+. .||.+|+||||...+..+.|+|||||||+++|++||++|.+. ...+..|+.......
T Consensus 223 La~~~~~~~-~-~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~ 300 (361)
T KOG1187|consen 223 LAKLGPEGD-T-SVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEG 300 (361)
T ss_pred CcccCCccc-c-ceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCc
Confidence 997654311 1 11222 899999999999999999999999999999999999998873 234788886666653
Q ss_pred ccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 780 DKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
.+.+++|+.+..........+.++..++.+|++.+|++||+|.||+++|+.+
T Consensus 301 -~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~ 352 (361)
T KOG1187|consen 301 -KLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGI 352 (361)
T ss_pred -chhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhh
Confidence 7899999998632222226778899999999999999999999999999754
No 3
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.4e-53 Score=527.63 Aligned_cols=445 Identities=36% Similarity=0.572 Sum_probs=385.5
Q ss_pred CCCCCCCCEEECCCCCCCC-ccc--ccCCCCCCEEECCCCCCCCcccccccCCCCCCEEeCcCCcCCCCCCcccCCCCCC
Q 003296 4 CGGIDGLKLLNFSKNELVS-LPT--FNGFAGLEVLDFSSNNLNGNINLQFDELVSLKSLNLSKNKFNGFLPINLGKTKAL 80 (833)
Q Consensus 4 ~~~l~~L~~L~ls~N~l~~-i~~--f~~l~~L~~L~Ls~N~l~~~~~~~f~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 80 (833)
+..+++|+.|+|++|++++ +|. |..+++|++|+|++|++++..|. +.+++|++|+|++|.+++..|..|+.+++|
T Consensus 89 ~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L 166 (968)
T PLN00113 89 IFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSL 166 (968)
T ss_pred HhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCC
Confidence 5678999999999999985 774 66899999999999999987775 568999999999999999999999999999
Q ss_pred CEEEccCCcCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCcEEECcCCcCCCCCCcccccCCccCccccccc
Q 003296 81 EELVLSGNAFHGEIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQN 160 (833)
Q Consensus 81 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~n 160 (833)
++|+|++|.+.+.+|..|+++++|++|+|++|.+.+.+|..|+++++|++|+|++|++++.+|..++.+++|+.|++++|
T Consensus 167 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n 246 (968)
T PLN00113 167 KVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYN 246 (968)
T ss_pred CEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCChhh--hhcCCEEecccccccccCCccCCCCCCCCEEecccccCcccCCCCCC--cCCcEEEcCCccccCCCCc
Q 003296 161 KFSGSVPGGI--TRFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMS--PNLVRLRLGTNLLIGEIPS 236 (833)
Q Consensus 161 ~l~~~~p~~~--~~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~n~l~~~~~~ 236 (833)
.+++.+|..+ .+.|+.|+|++|++.+..|..+..+++|+.|+|++|.+.+.+|..+. ++|+.|++++|.+.+.+|
T Consensus 247 ~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~- 325 (968)
T PLN00113 247 NLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIP- 325 (968)
T ss_pred eeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCC-
Confidence 9999999877 56799999999999999999999999999999999999999888765 799999999999887554
Q ss_pred cccCCCCCCCEEECCCCCCCCCCCccccCCCCCcEEEccCCccCCCChhhhCCCCCCcEEEccCCcCCCcCchhhcCCCc
Q 003296 237 ATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNGSLPIQLGSLGILQVMNLQLNKLSGEIPSQFSQLKL 316 (833)
Q Consensus 237 ~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 316 (833)
..+..+++|+.|+|++|.+++..|..++.+++|+.|++++|++.+.+|..+..+++|+.|++++|.+.+.+|..+..+++
T Consensus 326 ~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~ 405 (968)
T PLN00113 326 VALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRS 405 (968)
T ss_pred hhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCC
Confidence 56889999999999999999999999999999999999999999888888888888888888888888888888888888
Q ss_pred CceeeccCCcCcccCccccccCCCCCEEEccCCccccccCccccCCCCCCEEEccCCcCCccCC----------------
Q 003296 317 LSTMNISWNSLSGSIPSFLSNLTNLVNLNLRQNNLNGSIPNSITNMRSLIELQLGGNQLSGTIP---------------- 380 (833)
Q Consensus 317 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p---------------- 380 (833)
|+.|++++|++++.+|..|..+++|+.|++++|.+++.+|..+..+++|+.|++++|++.+.+|
T Consensus 406 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n 485 (968)
T PLN00113 406 LRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRN 485 (968)
T ss_pred CCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccccccceEEECcCC
Confidence 8888888888887777777777777777777777777777666666666666666555554444
Q ss_pred -------CCccccc--ceeeccccccccchhhhhccCCCCCEEecccCcCccccchhccCCCCCCeeeCcCCcccccCCC
Q 003296 381 -------MMPPRLQ--IALNLSSNLFEGPIPTTFARLNGLEVLDLSNNRFSGEIPQLLAQMPTLTQLLLTNNQLSGVVPK 451 (833)
Q Consensus 381 -------~~~~~~~--~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 451 (833)
.....+. ..|++++|.+.+.+|..|..+++|++|++++|.+++.+|..|..+++|+.|++++|+++|.+|.
T Consensus 486 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 565 (968)
T PLN00113 486 QFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPK 565 (968)
T ss_pred ccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCCh
Confidence 3222222 4577777878777888888888888888888888888888888888888888888888887775
No 4
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-50 Score=429.78 Aligned_cols=254 Identities=25% Similarity=0.314 Sum_probs=209.3
Q ss_pred CccccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCC-ceEEEEeeC
Q 003296 559 PLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD-SAYLFYEYA 637 (833)
Q Consensus 559 ~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~-~~~lv~ey~ 637 (833)
..+.+|+|+||+||+|.+.....||||++......... .++|.+|+.+|++++|||||+++|+|.++. ..++|||||
T Consensus 45 ~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~--~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~ 122 (362)
T KOG0192|consen 45 IEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDES--RKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYM 122 (362)
T ss_pred hhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHH--HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeC
Confidence 34569999999999999955455999999543322221 679999999999999999999999999887 799999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCC-eeecCCCccceeeCCCC-CceeccceeeeeeCCCCC
Q 003296 638 PKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNP-ILLLDLSTRNIFLKSLK-EPQIGDIELCKVIDPSKS 715 (833)
Q Consensus 638 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~-iiHrdlk~~Nill~~~~-~~ki~dfgl~~~~~~~~~ 715 (833)
++|+|.+++++.....++|..++.+|.|||+|+.||| +.+ ||||||||+|||++.++ ++||+|||+++......
T Consensus 123 ~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH---~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~- 198 (362)
T KOG0192|consen 123 PGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLH---SEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK- 198 (362)
T ss_pred CCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc-
Confidence 9999999998754668999999999999999999999 555 99999999999999997 99999999999875432
Q ss_pred CCcccccccccccccccccc--CCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCC
Q 003296 716 TGSLSTVAGSVGYIPPEYAY--TMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRT 793 (833)
Q Consensus 716 ~~~~~~~~gt~~y~aPE~~~--~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (833)
..++...||+.|||||++. ...|+.|+|||||||++|||+||+.||.+... .+.+........+ +.++
T Consensus 199 -~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-~~~~~~v~~~~~R------p~~p-- 268 (362)
T KOG0192|consen 199 -TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-VQVASAVVVGGLR------PPIP-- 268 (362)
T ss_pred -ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHhcCCC------CCCC--
Confidence 2334578999999999999 56899999999999999999999999986554 3333222222111 1111
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 794 SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 794 ~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
......+..++.+||+.||++||++.||+..|+.+
T Consensus 269 ----~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~ 303 (362)
T KOG0192|consen 269 ----KECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESI 303 (362)
T ss_pred ----ccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHH
Confidence 12455778899999999999999999999999864
No 5
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-51 Score=411.60 Aligned_cols=253 Identities=22% Similarity=0.283 Sum_probs=209.9
Q ss_pred hcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCC-ceEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD-SAYLF 633 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~-~~~lv 633 (833)
+.+..++||+|..|+|||+.+ ++++.+|.|.+.- ..+...+++..+|++++++++||+||++||+|+.+. +.+++
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~---~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~ 156 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILL---NIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISIC 156 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecc---cCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEee
Confidence 344568999999999999998 4899999999931 122334678999999999999999999999999998 59999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
||||++|||++++.. .+.+++...-+|+.+|++||.|||+ +++||||||||+|||++..|++||||||.++.+...
T Consensus 157 mEYMDgGSLd~~~k~--~g~i~E~~L~~ia~~VL~GL~YLh~--~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS 232 (364)
T KOG0581|consen 157 MEYMDGGSLDDILKR--VGRIPEPVLGKIARAVLRGLSYLHE--ERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS 232 (364)
T ss_pred hhhcCCCCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhh--ccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh
Confidence 999999999999986 3569999999999999999999995 378999999999999999999999999999887543
Q ss_pred CCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCC-ccHHHHHHHhhcccccccccccccccC
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQG-NELAKWVLRNSAQQDKLDHILDFNVSR 792 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 792 (833)
...+++||..|||||.+.+..|+.++||||||++++|+.+|+.||... .....|+. -+..+++...+.
T Consensus 233 ----~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~-------Ll~~Iv~~ppP~ 301 (364)
T KOG0581|consen 233 ----IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFE-------LLCAIVDEPPPR 301 (364)
T ss_pred ----hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHH-------HHHHHhcCCCCC
Confidence 336789999999999999999999999999999999999999999753 11112221 122233322221
Q ss_pred CchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 793 TSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 793 ~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.+.. ..+.++.+++..||++||.+||+++|+++|
T Consensus 302 lP~~--~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 302 LPEG--EFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred CCcc--cCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 1111 357789999999999999999999999876
No 6
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4e-49 Score=418.65 Aligned_cols=251 Identities=20% Similarity=0.286 Sum_probs=214.9
Q ss_pred HhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
..|+..++||+|+|++||+++. .+|..||+|++ .+........++...+||+|.++++|||||+++++|++.+.+|||
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvV-pk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYiv 96 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVV-PKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIV 96 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEe-ehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEE
Confidence 4688899999999999999998 89999999999 444555566778899999999999999999999999999999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
.|+|++|+|..+++. ..++++.+++.++.||+.||.||| +.+|||||||..|+++++++++||+|||+|..+...
T Consensus 97 LELC~~~sL~el~Kr--rk~ltEpEary~l~QIv~GlkYLH---~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~ 171 (592)
T KOG0575|consen 97 LELCHRGSLMELLKR--RKPLTEPEARYFLRQIVEGLKYLH---SLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD 171 (592)
T ss_pred EEecCCccHHHHHHh--cCCCCcHHHHHHHHHHHHHHHHHH---hcCceecccchhheeecCcCcEEecccceeeeecCc
Confidence 999999999999984 567999999999999999999999 888999999999999999999999999999988644
Q ss_pred CCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCC
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRT 793 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (833)
... -.+.||||.|.|||++....++..+||||+|||+|.|++|++||+... ..+........... +
T Consensus 172 ~Er--k~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~-vkety~~Ik~~~Y~--------~--- 237 (592)
T KOG0575|consen 172 GER--KKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT-VKETYNKIKLNEYS--------M--- 237 (592)
T ss_pred ccc--cceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch-HHHHHHHHHhcCcc--------c---
Confidence 322 257899999999999999899999999999999999999999997432 22111111111111 1
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 794 SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 794 ~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
+...+.++.+||.++|++||.+|||+++|+.+
T Consensus 238 ---P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 238 ---PSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred ---ccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 11345578899999999999999999999875
No 7
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.8e-50 Score=402.96 Aligned_cols=258 Identities=22% Similarity=0.260 Sum_probs=210.6
Q ss_pred HHHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhh---ccChhHHHHHHHHHhcCCCCCcccceEEEecCC
Q 003296 553 MEAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQ---LGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD 628 (833)
Q Consensus 553 ~~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~ 628 (833)
..+.|...+.+|+|+||.|-+|.. .+|+.||||++++...... ........+|++||++++|||||+++++|..++
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 345567789999999999999996 5899999999963322111 112234579999999999999999999999999
Q ss_pred ceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCC---CCceeccce
Q 003296 629 SAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSL---KEPQIGDIE 705 (833)
Q Consensus 629 ~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~---~~~ki~dfg 705 (833)
..|+|||||+||+|++.+-. ...+.+...+-++.|++.|+.||| +.+|+||||||+|||+..+ ..+||+|||
T Consensus 250 s~YmVlE~v~GGeLfd~vv~--nk~l~ed~~K~~f~Qll~avkYLH---~~GI~HRDiKPeNILl~~~~e~~llKItDFG 324 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVA--NKYLREDLGKLLFKQLLTAVKYLH---SQGIIHRDIKPENILLSNDAEDCLLKITDFG 324 (475)
T ss_pred ceEEEEEEecCccHHHHHHh--ccccccchhHHHHHHHHHHHHHHH---HcCcccccCCcceEEeccCCcceEEEecccc
Confidence 99999999999999999876 456788888999999999999999 8999999999999999765 678999999
Q ss_pred eeeeeCCCCCCCccccccccccccccccccCCcc---cccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccc
Q 003296 706 LCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRV---TMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKL 782 (833)
Q Consensus 706 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 782 (833)
+|+..... ..+.+.||||.|.|||++.+..+ ..|+|+||+|||||-+++|.+||.+...... -.
T Consensus 325 lAK~~g~~---sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~s----------l~ 391 (475)
T KOG0615|consen 325 LAKVSGEG---SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPS----------LK 391 (475)
T ss_pred hhhccccc---eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCcc----------HH
Confidence 99987533 25678999999999999986543 3588999999999999999999985322110 11
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 783 DHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
+.+....+...+..+.+...+++++|.+||..||++|||+.|+++|
T Consensus 392 eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 392 EQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred HHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 1222233333445667888999999999999999999999999875
No 8
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-49 Score=400.87 Aligned_cols=202 Identities=25% Similarity=0.351 Sum_probs=179.2
Q ss_pred HhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
.+|...+.||+|+||+||+|++ .+|..||||++..+. . ..+.++....|+++|+.++|||||+++++++.++.+|||
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~-l-~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKK-L-NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhc-c-CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence 4566777899999999999997 478999999995331 1 223456788999999999999999999999999999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCC------CCceeccceee
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSL------KEPQIGDIELC 707 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~------~~~ki~dfgl~ 707 (833)
||||.||||.++++. .+.+++.+.+.++.|+|.||++|| +++||||||||+||||+.. -.+||+|||+|
T Consensus 88 MEyC~gGDLs~yi~~--~~~l~e~t~r~Fm~QLA~alq~L~---~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfA 162 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRR--RGRLPEATARHFMQQLASALQFLH---ENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFA 162 (429)
T ss_pred EEeCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCcceEEeccCCCCCCCceEEecccchh
Confidence 999999999999997 447999999999999999999999 8999999999999999865 35799999999
Q ss_pred eeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCc
Q 003296 708 KVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGN 766 (833)
Q Consensus 708 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~ 766 (833)
+.+.++. ...+.||++.|||||++..++|+.|+|+||.|+|+|||++|+.||+...
T Consensus 163 R~L~~~~---~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t 218 (429)
T KOG0595|consen 163 RFLQPGS---MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAET 218 (429)
T ss_pred hhCCchh---HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccC
Confidence 9987544 3467899999999999999999999999999999999999999998543
No 9
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.5e-50 Score=382.41 Aligned_cols=258 Identities=17% Similarity=0.266 Sum_probs=208.8
Q ss_pred HhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceE-EEecCCc-eE
Q 003296 555 AVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLA-YVLASDS-AY 631 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~-~~~~~~~-~~ 631 (833)
++|.+.+.||+|+||+|||+.. .+|..||.|.++.. ..+.+.++....|+.+|++++|||||++++ .+.++.+ ++
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~--~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evln 96 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFG--MMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLN 96 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchh--hccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhH
Confidence 3566678999999999999995 79999999999522 233445678999999999999999999999 4555555 89
Q ss_pred EEEeeCCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHhhhcCCCCC--eeecCCCccceeeCCCCCceeccceee
Q 003296 632 LFYEYAPKGTLFDVLHGC--LENALDWASRYSIAVGVAQGLAFLHGFTSNP--ILLLDLSTRNIFLKSLKEPQIGDIELC 707 (833)
Q Consensus 632 lv~ey~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~--iiHrdlk~~Nill~~~~~~ki~dfgl~ 707 (833)
||||||.+|||...++.. .+..+++.++++++.|+++||.++|.-. ++ |+||||||.||+++.+|.+|++|||++
T Consensus 97 ivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~-~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~ 175 (375)
T KOG0591|consen 97 IVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKI-PRGTVMHRDIKPANIFLTANGVVKLGDFGLG 175 (375)
T ss_pred HHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccc-cccceeeccCcchheEEcCCCceeeccchhH
Confidence 999999999999999743 2457999999999999999999999522 44 999999999999999999999999999
Q ss_pred eeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccccccc
Q 003296 708 KVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILD 787 (833)
Q Consensus 708 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (833)
+.+.... ....+.+|||.||+||.+.+.+|+.||||||+||++|||+.-++||.+. ...+...... ++
T Consensus 176 r~l~s~~--tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-n~~~L~~KI~-qg-------- 243 (375)
T KOG0591|consen 176 RFLSSKT--TFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-NLLSLCKKIE-QG-------- 243 (375)
T ss_pred hHhcchh--HHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-cHHHHHHHHH-cC--------
Confidence 9886433 2345789999999999999999999999999999999999999999876 3333322211 11
Q ss_pred ccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 003296 788 FNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLL 830 (833)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~ 830 (833)
+.++. .....+.++.+++..|++.||+.||+.-..++.++
T Consensus 244 -d~~~~--p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~ 283 (375)
T KOG0591|consen 244 -DYPPL--PDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ 283 (375)
T ss_pred -CCCCC--cHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence 11111 12356778899999999999999999655555543
No 10
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-48 Score=390.39 Aligned_cols=245 Identities=21% Similarity=0.267 Sum_probs=208.1
Q ss_pred HHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEE
Q 003296 554 EAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYL 632 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 632 (833)
-++|+..++||+|+||+||.++. ++++.+|+|+++ +++....++.+...+|..||.+++||.||+++..|++.+.+|+
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~-K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLK-KKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhh-hhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 45788999999999999999986 589999999994 5555566677889999999999999999999999999999999
Q ss_pred EEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCC
Q 003296 633 FYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDP 712 (833)
Q Consensus 633 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~ 712 (833)
|+||+.||+|+.+|.+ ++.+++.++..++.+|+.||.||| +.+|||||+||+|||||++|+++++|||+|+....
T Consensus 103 Vld~~~GGeLf~hL~~--eg~F~E~~arfYlaEi~lAL~~LH---~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~ 177 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQR--EGRFSEDRARFYLAEIVLALGYLH---SKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK 177 (357)
T ss_pred EEeccCCccHHHHHHh--cCCcchhHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHeeecCCCcEEEeccccchhccc
Confidence 9999999999999986 567899999999999999999999 89999999999999999999999999999996543
Q ss_pred CCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccC
Q 003296 713 SKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSR 792 (833)
Q Consensus 713 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 792 (833)
... .+.++|||+.|||||++.+..|+..+|+||+||++|||++|.+||.+.+. ..+........ ...
T Consensus 178 ~~~--~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~-~~~~~~I~~~k----------~~~ 244 (357)
T KOG0598|consen 178 DGD--ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDV-KKMYDKILKGK----------LPL 244 (357)
T ss_pred CCC--ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccH-HHHHHHHhcCc----------CCC
Confidence 332 33568999999999999999999999999999999999999999975442 33333222221 111
Q ss_pred CchhHHHHHHHHHHHHHhccCCCCCCCC
Q 003296 793 TSLAVRSQMLTVLKVAVACVSVSPEARP 820 (833)
Q Consensus 793 ~~~~~~~~~~~~~~l~~~cl~~dP~~Rp 820 (833)
.+ .-...++.+++.+.+..||++|.
T Consensus 245 ~p---~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 245 PP---GYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred CC---ccCCHHHHHHHHHHhccCHHHhc
Confidence 11 11345678999999999999995
No 11
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.4e-46 Score=364.32 Aligned_cols=264 Identities=15% Similarity=0.204 Sum_probs=209.6
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
.|+....+|+|+||+||||+.+ +|+.||||++.... .+....+-..|||++|++++|||+|.++++|......+||+
T Consensus 3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Ese--dd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVF 80 (396)
T KOG0593|consen 3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESE--DDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVF 80 (396)
T ss_pred HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCC--ccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEe
Confidence 4677789999999999999974 89999999994221 22334566789999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
|||+. ++.+-|... ...++.....+|+.|+++|+.|+| ++++|||||||+|||++.++.+|+||||+|+.+....
T Consensus 81 E~~dh-TvL~eLe~~-p~G~~~~~vk~~l~Q~l~ai~~cH---k~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pg 155 (396)
T KOG0593|consen 81 EYCDH-TVLHELERY-PNGVPSELVKKYLYQLLKAIHFCH---KNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPG 155 (396)
T ss_pred eecch-HHHHHHHhc-cCCCCHHHHHHHHHHHHHHhhhhh---hcCeecccCChhheEEecCCcEEeccchhhHhhcCCc
Confidence 99988 555555433 345899999999999999999999 8899999999999999999999999999999886322
Q ss_pred CCCccccccccccccccccccC-CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccc---ccccc--
Q 003296 715 STGSLSTVAGSVGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLD---HILDF-- 788 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~-- 788 (833)
...+..+.|.+|.|||.+.+ .+|+..+||||.||++.||++|.+-|.+..++++.......-++-+. .++..
T Consensus 156 --d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~ 233 (396)
T KOG0593|consen 156 --DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNP 233 (396)
T ss_pred --chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCC
Confidence 13356789999999999887 68999999999999999999999999988888776544332222111 11111
Q ss_pred --------cccCCc---hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 789 --------NVSRTS---LAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 789 --------~~~~~~---~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
...... ........-+++++..|++.||++|++.+|++.|
T Consensus 234 ~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 234 FFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred ceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 000000 0111234468899999999999999999998865
No 12
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-46 Score=393.42 Aligned_cols=251 Identities=22% Similarity=0.310 Sum_probs=208.1
Q ss_pred CccccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEeeCC
Q 003296 559 PLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAP 638 (833)
Q Consensus 559 ~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey~~ 638 (833)
..+.||+|-||.||.|.+.....||||.++.. ....++|.+|+++|++++|+|||+++|+|..++.+|||||||+
T Consensus 210 l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-----~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~ 284 (468)
T KOG0197|consen 210 LIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-----SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMP 284 (468)
T ss_pred HHHHhcCCccceEEEEEEcCCCcccceEEecc-----ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecc
Confidence 34689999999999999988889999999532 2235789999999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCc
Q 003296 639 KGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGS 718 (833)
Q Consensus 639 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~ 718 (833)
.|+|.++|+...+..+.-.+.+.++.|||+|++||+ ++++|||||.++|||++++..+||+|||+||....+..+..
T Consensus 285 ~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLe---s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~ 361 (468)
T KOG0197|consen 285 KGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLE---SKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTAS 361 (468)
T ss_pred cCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHH---hCCccchhhhhhheeeccCceEEEcccccccccCCCceeec
Confidence 999999999766678999999999999999999999 88999999999999999999999999999996554443221
Q ss_pred cccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccccccCCchhH
Q 003296 719 LSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAV 797 (833)
Q Consensus 719 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (833)
....-...|.|||.+..++++.|||||||||+||||+| |+.||.+.. ..+.+ .....+.++. . +
T Consensus 362 -~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~ms-n~ev~-~~le~GyRlp--------~----P 426 (468)
T KOG0197|consen 362 -EGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMS-NEEVL-ELLERGYRLP--------R----P 426 (468)
T ss_pred -CCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCC-HHHHH-HHHhccCcCC--------C----C
Confidence 22233568999999999999999999999999999998 788886433 22222 2222222221 1 1
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 798 RSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 798 ~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
..++.++-+++..||..+|++|||++.+...|+++
T Consensus 427 ~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~ 461 (468)
T KOG0197|consen 427 EGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDF 461 (468)
T ss_pred CCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHh
Confidence 24566888999999999999999999998888765
No 13
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-46 Score=386.97 Aligned_cols=256 Identities=22% Similarity=0.309 Sum_probs=216.1
Q ss_pred HHHHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEecCCc
Q 003296 552 AMEAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVLASDS 629 (833)
Q Consensus 552 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~ 629 (833)
..-++|.+.+.||+|+|++||+|+. .++++||||++. +.-...+...+-..+|-.+|.+| .||.||+++..|+++..
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~-K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLD-KRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhh-HHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 3346788899999999999999996 589999999994 44444455567788999999999 79999999999999999
Q ss_pred eEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeee
Q 003296 630 AYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKV 709 (833)
Q Consensus 630 ~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~ 709 (833)
+|+|+||+++|+|.+++++ .+.+++...+.+|.+|+.||+||| +++||||||||+|||+|++|++||+|||-|+.
T Consensus 149 LYFvLe~A~nGdll~~i~K--~Gsfde~caR~YAAeIldAleylH---~~GIIHRDlKPENILLd~dmhikITDFGsAK~ 223 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKK--YGSFDETCARFYAAEILDALEYLH---SNGIIHRDLKPENILLDKDGHIKITDFGSAKI 223 (604)
T ss_pred eEEEEEecCCCcHHHHHHH--hCcchHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeEcCCCcEEEeecccccc
Confidence 9999999999999999997 467898889999999999999999 89999999999999999999999999999998
Q ss_pred eCCCCCC---------Cc--cccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcc
Q 003296 710 IDPSKST---------GS--LSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQ 778 (833)
Q Consensus 710 ~~~~~~~---------~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 778 (833)
+.+.... .. ..+++||..|.+||++.....+..+|+|+|||++|+|+.|++||.+.++..........
T Consensus 224 l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l- 302 (604)
T KOG0592|consen 224 LSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQAL- 302 (604)
T ss_pred CChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHh-
Confidence 8643221 11 14689999999999999999999999999999999999999999987765433222111
Q ss_pred cccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 779 QDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
+..++. ..++.+.+|+.+.|..||.+|+|.+||-+|
T Consensus 303 --------~y~fp~------~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 303 --------DYEFPE------GFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred --------cccCCC------CCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 111111 223567899999999999999999998776
No 14
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-45 Score=386.57 Aligned_cols=250 Identities=20% Similarity=0.276 Sum_probs=212.6
Q ss_pred HhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
..|.....||+|+.|.||.|.. .+++.||||++.... ....+-...|+.+|+..+|+|||.+++.|...+++|.|
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~----Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVV 348 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRK----QPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVV 348 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEecc----CCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEE
Confidence 3456677899999999999985 589999999995222 23345678999999999999999999999999999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
||||++|+|.|++.. ..+++.++..|+.++++||+||| ..+|+|||||.+|||++.+|.+||+|||+|..+...
T Consensus 349 MEym~ggsLTDvVt~---~~~~E~qIA~Icre~l~aL~fLH---~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~ 422 (550)
T KOG0578|consen 349 MEYMEGGSLTDVVTK---TRMTEGQIAAICREILQGLKFLH---ARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEE 422 (550)
T ss_pred EeecCCCchhhhhhc---ccccHHHHHHHHHHHHHHHHHHH---hcceeeeccccceeEeccCCcEEEeeeeeeeccccc
Confidence 999999999999985 35899999999999999999999 889999999999999999999999999999988655
Q ss_pred CCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCC
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRT 793 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (833)
.. .-.+.+|||+|||||++....|++|+||||+|++++||+-|++||-.+..+.......... .+.+
T Consensus 423 ~~--KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng--------~P~l--- 489 (550)
T KOG0578|consen 423 QS--KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG--------TPKL--- 489 (550)
T ss_pred cC--ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcC--------CCCc---
Confidence 43 2367899999999999999999999999999999999999999998766655433222111 1111
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 794 SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 794 ~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
......+..+.+++.+||+.||++||++.|+|+|
T Consensus 490 -k~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 490 -KNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred -CCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 1233556788999999999999999999999986
No 15
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.8e-45 Score=376.90 Aligned_cols=265 Identities=20% Similarity=0.256 Sum_probs=213.3
Q ss_pred HHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecC--Cce
Q 003296 554 EAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS--DSA 630 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~--~~~ 630 (833)
.+.|+..+.||+|+||.||||+. .+|+.||+|++.... .+.+...-..|||.||++++|||||++.+...+. ..+
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~--~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~si 193 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDN--EKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSI 193 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeeccc--CCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceE
Confidence 44566678999999999999996 689999999995321 2334456678999999999999999999999877 689
Q ss_pred EEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeee
Q 003296 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVI 710 (833)
Q Consensus 631 ~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~ 710 (833)
|||+|||+. ||.-++... ...++..+++.++.|++.||+||| .++|+|||||.+|||||.+|.+||+|||+|++.
T Consensus 194 YlVFeYMdh-DL~GLl~~p-~vkft~~qIKc~mkQLl~Gl~~cH---~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y 268 (560)
T KOG0600|consen 194 YLVFEYMDH-DLSGLLSSP-GVKFTEPQIKCYMKQLLEGLEYCH---SRGVLHRDIKGSNILIDNNGVLKIADFGLARFY 268 (560)
T ss_pred EEEEecccc-hhhhhhcCC-CcccChHHHHHHHHHHHHHHHHHh---hcCeeeccccccceEEcCCCCEEeccccceeec
Confidence 999999998 999888752 346999999999999999999999 899999999999999999999999999999988
Q ss_pred CCCCCCCccccccccccccccccccCC-cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccc-
Q 003296 711 DPSKSTGSLSTVAGSVGYIPPEYAYTM-RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDF- 788 (833)
Q Consensus 711 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~- 788 (833)
...... ..+..+-|.+|.|||.+.+. .|+.++|+||.|||+.||++|++.|.+..++.+.-......+..-++. .+
T Consensus 269 ~~~~~~-~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~-W~~ 346 (560)
T KOG0600|consen 269 TPSGSA-PYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDY-WPV 346 (560)
T ss_pred cCCCCc-ccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhc-ccc
Confidence 765533 34566779999999998865 699999999999999999999999998887776544333222111111 11
Q ss_pred -ccc-----CC--------chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 003296 789 -NVS-----RT--------SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLR 827 (833)
Q Consensus 789 -~~~-----~~--------~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~ 827 (833)
.++ .+ .+.....+..+++|+..+|..||.+|.|+.++++
T Consensus 347 ~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 347 SKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred ccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 000 00 0112233567889999999999999999999886
No 16
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-44 Score=368.21 Aligned_cols=263 Identities=18% Similarity=0.249 Sum_probs=213.5
Q ss_pred HhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
++|+..++||.|.-++||+|.. +.+..||||++. -++. ..+.+...+|+..|+.++|||||+++..|..+..+|+|
T Consensus 26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~in-LEkc--~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvV 102 (516)
T KOG0582|consen 26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIIN-LEKC--NNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVV 102 (516)
T ss_pred cceeEEEEEeccceeEeeeeeecccCCEEEEEEee-hhhh--hhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEe
Confidence 4688889999999999999995 789999999994 2222 22367899999999999999999999999999999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
|.||.+||+.++++..-...+++..+..|.+++++||.||| .++-||||||+.|||||.+|.+|++|||.+..+...
T Consensus 103 mpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH---~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~ 179 (516)
T KOG0582|consen 103 MPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLH---QNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDS 179 (516)
T ss_pred ehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHH---hcCceecccccccEEEcCCCcEEEcCceeeeeeccc
Confidence 99999999999998765567999999999999999999999 889999999999999999999999999997766443
Q ss_pred CCCC--cccccccccccccccccc--CCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccccccccc
Q 003296 714 KSTG--SLSTVAGSVGYIPPEYAY--TMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFN 789 (833)
Q Consensus 714 ~~~~--~~~~~~gt~~y~aPE~~~--~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (833)
.... ...+++||++|||||++. ...|+.|+||||||++..|+.+|..||..-..+.-...........+.-
T Consensus 180 G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t----- 254 (516)
T KOG0582|consen 180 GDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLT----- 254 (516)
T ss_pred CceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCccc-----
Confidence 3221 114679999999999954 3469999999999999999999999998655444333333322221110
Q ss_pred ccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 790 VSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 790 ~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
..............+.+++..||++||++|||+++++++
T Consensus 255 ~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 255 SGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred ccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 001112223445688899999999999999999999875
No 17
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-45 Score=378.43 Aligned_cols=266 Identities=16% Similarity=0.205 Sum_probs=216.1
Q ss_pred HHHHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCC-CCCcccceEEEecCC-
Q 003296 552 AMEAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLS-NSNVMTPLAYVLASD- 628 (833)
Q Consensus 552 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~- 628 (833)
...+.|...+.+|.|+||.||+|+. .+|..||||+++++-.. . +.-.=.||++.|++++ |||||++.+++.+.+
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~--ee~~nLREvksL~kln~hpniikL~Evi~d~~~ 83 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-W--EECMNLREVKSLRKLNPHPNIIKLKEVIRDNDR 83 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-H--HHHHHHHHHHHHHhcCCCCcchhhHHHhhccCc
Confidence 3456777889999999999999995 68999999999533211 1 1122368999999999 999999999999988
Q ss_pred ceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeee
Q 003296 629 SAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCK 708 (833)
Q Consensus 629 ~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~ 708 (833)
.+|+|||||+. +|+++++++ ...+++..++.|+.||++||+|+| .+|+.|||+||+|||+.....+||+|||+||
T Consensus 84 ~L~fVfE~Md~-NLYqLmK~R-~r~fse~~irnim~QilqGL~hiH---k~GfFHRDlKPENiLi~~~~~iKiaDFGLAR 158 (538)
T KOG0661|consen 84 ILYFVFEFMDC-NLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIH---KHGFFHRDLKPENILISGNDVIKIADFGLAR 158 (538)
T ss_pred eEeeeHHhhhh-hHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHH---hcCcccccCChhheEecccceeEeccccccc
Confidence 89999999987 999999986 678999999999999999999999 8999999999999999988999999999999
Q ss_pred eeCCCCCCCcccccccccccccccccc-CCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccc---
Q 003296 709 VIDPSKSTGSLSTVAGSVGYIPPEYAY-TMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDH--- 784 (833)
Q Consensus 709 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--- 784 (833)
.+.... ..+..+.|.+|.|||++. .+-|+.+.||||+|||++|+.+-++-|.+.+++++.......-+....+
T Consensus 159 ev~Skp---PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~ 235 (538)
T KOG0661|consen 159 EVRSKP---PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWP 235 (538)
T ss_pred ccccCC---CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccch
Confidence 876443 346789999999999876 5669999999999999999999999999988888765544332221111
Q ss_pred -------cccccccCCch-----hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 785 -------ILDFNVSRTSL-----AVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 785 -------~~~~~~~~~~~-----~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.+...++.... -......++++++.+|+++||++|||++|+++|
T Consensus 236 eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 236 EGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred hHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 11111111110 011256789999999999999999999999875
No 18
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2.8e-44 Score=342.88 Aligned_cols=264 Identities=19% Similarity=0.226 Sum_probs=213.3
Q ss_pred hcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
.|...+.+|+|.||.||+|.+ .+|+.||||+++.. ....+-.....|||+.|+.++|||||.++++|...+.+-||+
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~--~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVf 80 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLG--NAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVF 80 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeecc--ccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEE
Confidence 466678999999999999996 58999999999533 223344567899999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
|||+. ||+.+++.. ...+...+++.++.++.+|++||| ...|+|||+||.|+|++++|.+|++|||+|+......
T Consensus 81 Efm~t-dLe~vIkd~-~i~l~pa~iK~y~~m~LkGl~y~H---~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~ 155 (318)
T KOG0659|consen 81 EFMPT-DLEVVIKDK-NIILSPADIKSYMLMTLKGLAYCH---SKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN 155 (318)
T ss_pred Eeccc-cHHHHhccc-ccccCHHHHHHHHHHHHHHHHHHH---hhhhhcccCCccceEEcCCCcEEeecccchhccCCCC
Confidence 99987 999999864 457899999999999999999999 8889999999999999999999999999999886544
Q ss_pred CCCccccccccccccccccccCC-cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccc-------ccccc
Q 003296 715 STGSLSTVAGSVGYIPPEYAYTM-RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDK-------LDHIL 786 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~-------~~~~~ 786 (833)
... +..+-|..|.|||.+.+. .|+..+||||.|||+.||+-|.+-|.+..++++.......-+.. +..+-
T Consensus 156 ~~~--~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lp 233 (318)
T KOG0659|consen 156 RIQ--THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLP 233 (318)
T ss_pred ccc--ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccc
Confidence 322 233679999999988764 59999999999999999999998888888888765544332211 11111
Q ss_pred ccc----ccCCc--hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 787 DFN----VSRTS--LAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 787 ~~~----~~~~~--~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
|.. .+.+. .-.......+++++.+++..||.+|+|++|+++|
T Consensus 234 dY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 234 DYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred cHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 111 00000 0122345677999999999999999999999876
No 19
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-45 Score=373.92 Aligned_cols=253 Identities=23% Similarity=0.332 Sum_probs=202.2
Q ss_pred cCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCC--ceEEE
Q 003296 557 ANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD--SAYLF 633 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~--~~~lv 633 (833)
+...+.||+|+||+||.+... +|...|||.+.... ....+...+|+++|++++|||||+++|.....+ .+++.
T Consensus 19 ~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~----~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~ 94 (313)
T KOG0198|consen 19 WSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELED----SPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIF 94 (313)
T ss_pred hhhhccccCccceEEEEEEecCCCcceeeeeeeccc----chhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEee
Confidence 445689999999999999975 59999999994221 111566899999999999999999999866555 69999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCC-CCCceeccceeeeeeCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKS-LKEPQIGDIELCKVIDP 712 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~-~~~~ki~dfgl~~~~~~ 712 (833)
|||+++|+|.+++.+.+. .+++..+..++.||++||+||| +++||||||||+|||++. ++.+||+|||.++....
T Consensus 95 mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylH---s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~ 170 (313)
T KOG0198|consen 95 MEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLH---SKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLES 170 (313)
T ss_pred eeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHH---hCCEeccCcccceEEEeCCCCeEEeccCcccccccc
Confidence 999999999999997544 7999999999999999999999 889999999999999999 79999999999987753
Q ss_pred C-CCCCccccccccccccccccccCCc-ccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccc
Q 003296 713 S-KSTGSLSTVAGSVGYIPPEYAYTMR-VTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNV 790 (833)
Q Consensus 713 ~-~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (833)
. ..........||+.|||||++..+. ...++||||+||++.||+||++||.+......+........ .. |.+
T Consensus 171 ~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~-~~-----P~i 244 (313)
T KOG0198|consen 171 KGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGRED-SL-----PEI 244 (313)
T ss_pred ccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccC-CC-----CCC
Confidence 1 1111234578999999999998533 33599999999999999999999975322233332222221 11 111
Q ss_pred cCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 003296 791 SRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRML 829 (833)
Q Consensus 791 ~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L 829 (833)
+...+.++.+++.+|++.||++||||+|+++|-
T Consensus 245 ------p~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hp 277 (313)
T KOG0198|consen 245 ------PDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHP 277 (313)
T ss_pred ------CcccCHHHHHHHHHHhhcCcccCcCHHHHhhCh
Confidence 123455788999999999999999999999874
No 20
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.4e-45 Score=383.90 Aligned_cols=248 Identities=21% Similarity=0.282 Sum_probs=211.5
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
+|...+.||+|+||+||||+.+ +++.||+|.+.+..+ ..++.+...+|++|+++++|||||.++++|+...++|+|.
T Consensus 3 ~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr--~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVt 80 (808)
T KOG0597|consen 3 QYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGR--NEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVT 80 (808)
T ss_pred chhHHHHhcCCccceeeecccccceeEEEEEEehhcCC--chHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEe
Confidence 5666789999999999999975 789999999954333 2345677999999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
|||.| +|+.+|.. .+.+++..+..++.+++.||.||| +.+|+|||+||.|||++..+.+|++|||+|+.+...
T Consensus 81 e~a~g-~L~~il~~--d~~lpEe~v~~~a~~LVsaL~yLh---s~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~- 153 (808)
T KOG0597|consen 81 EYAVG-DLFTILEQ--DGKLPEEQVRAIAYDLVSALYYLH---SNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN- 153 (808)
T ss_pred hhhhh-hHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHH---hcCcccccCCcceeeecCCCceeechhhhhhhcccC-
Confidence 99977 99999986 567999999999999999999999 899999999999999999999999999999988653
Q ss_pred CCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCc
Q 003296 715 STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTS 794 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (833)
+...+.+.|||.|||||++.++.|+..+|.||+||++|||.+|++||.. .++.+.+.....+.. .
T Consensus 154 -t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a-~si~~Lv~~I~~d~v----------~--- 218 (808)
T KOG0597|consen 154 -TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA-RSITQLVKSILKDPV----------K--- 218 (808)
T ss_pred -ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH-HHHHHHHHHHhcCCC----------C---
Confidence 3345678999999999999999999999999999999999999999963 334444443333211 1
Q ss_pred hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 795 LAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 795 ~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.+......+..++...+.+||.+|.|..+++.|
T Consensus 219 -~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 219 -PPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred -CcccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 112445678889999999999999999998765
No 21
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.6e-45 Score=341.23 Aligned_cols=252 Identities=20% Similarity=0.280 Sum_probs=216.0
Q ss_pred HHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEE
Q 003296 554 EAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYL 632 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 632 (833)
-++|+..+.+|+|.||.||.|.. +++..||+|++ .+......+..+++.+|++|-+.++||||.++|+||.+....||
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVl-fKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyL 99 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVL-FKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYL 99 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeee-eHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEE
Confidence 35788999999999999999996 57899999999 55566667778899999999999999999999999999999999
Q ss_pred EEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCC
Q 003296 633 FYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDP 712 (833)
Q Consensus 633 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~ 712 (833)
++||.+.|+++..|.+.....+++.....++.|+|.|+.|+| .++||||||||+|+|++..+..|++|||.+.....
T Consensus 100 ilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h---~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~ 176 (281)
T KOG0580|consen 100 ILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCH---LKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 176 (281)
T ss_pred EEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhc---cCCcccCCCCHHHhccCCCCCeeccCCCceeecCC
Confidence 999999999999999766667888889999999999999999 89999999999999999999999999999876542
Q ss_pred CCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccC
Q 003296 713 SKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSR 792 (833)
Q Consensus 713 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 792 (833)
.. -.+.|||..|.|||...+..++.++|+|++||+.||++.|.+||........+.... ..++..
T Consensus 177 ~k----R~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~-----------k~~~~~ 241 (281)
T KOG0580|consen 177 NK----RKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIR-----------KVDLKF 241 (281)
T ss_pred CC----ceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHH-----------HccccC
Confidence 22 257899999999999999999999999999999999999999998544222221111 111111
Q ss_pred CchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 793 TSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 793 ~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
+ ......+.++|.+|+..+|.+|.+..||+.|
T Consensus 242 p----~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 242 P----STISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred C----cccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 1 2344578899999999999999999999876
No 22
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-44 Score=348.64 Aligned_cols=239 Identities=21% Similarity=0.271 Sum_probs=205.7
Q ss_pred HhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
++|+....+|.|+||+|..++.+ +|.-+|+|+++ +.+..+.+..+....|..+|+.+.||.+|++++.|.+.+.+|+|
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~-k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLD-KQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcC-HHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence 46778899999999999999974 78999999994 55555556677889999999999999999999999999999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
|||.+||.|+.++++ .+.+++..++.+|.||+.|++||| +..|++||+||+|||+|++|.+||.|||+|+....
T Consensus 123 meyv~GGElFS~Lrk--~~rF~e~~arFYAAeivlAleylH---~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~- 196 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRK--SGRFSEPHARFYAAEIVLALEYLH---SLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG- 196 (355)
T ss_pred EeccCCccHHHHHHh--cCCCCchhHHHHHHHHHHHHHHHH---hcCeeeccCChHHeeeccCCcEEEEeccceEEecC-
Confidence 999999999999997 456899999999999999999999 88999999999999999999999999999998753
Q ss_pred CCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCC
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRT 793 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (833)
.+.+.||||.|+|||++....|..++|+|||||++|||+.|.+||.+.+.+.-+- +++...+.-+
T Consensus 197 ----rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~-----------KI~~~~v~fP 261 (355)
T KOG0616|consen 197 ----RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYE-----------KILEGKVKFP 261 (355)
T ss_pred ----cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHH-----------HHHhCcccCC
Confidence 2467899999999999999999999999999999999999999998776643322 2222222221
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCC
Q 003296 794 SLAVRSQMLTVLKVAVACVSVSPEAR 819 (833)
Q Consensus 794 ~~~~~~~~~~~~~l~~~cl~~dP~~R 819 (833)
.-...++.+|+.+.++.|-.+|
T Consensus 262 ----~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 262 ----SYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred ----cccCHHHHHHHHHHHhhhhHhh
Confidence 1234567789999999999888
No 23
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.7e-44 Score=377.23 Aligned_cols=258 Identities=16% Similarity=0.184 Sum_probs=210.7
Q ss_pred HHHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceE
Q 003296 553 MEAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAY 631 (833)
Q Consensus 553 ~~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~ 631 (833)
..++|+...+||+|+||.||.|+- .+|..+|+|+++ +.........+....|-.+|...++|+||+++..|++.+.+|
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~Lk-KS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LY 217 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILK-KSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLY 217 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeeccc-HHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeE
Confidence 346788899999999999999996 589999999995 444445566788999999999999999999999999999999
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeC
Q 003296 632 LFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711 (833)
Q Consensus 632 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~ 711 (833)
|||||+||||+..+|.. ...+++..+..++.+.+.|+.-+| ..++|||||||+|+|||..|++|++|||+|.-..
T Consensus 218 LiMEylPGGD~mTLL~~--~~~L~e~~arfYiaE~vlAI~~iH---~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~ 292 (550)
T KOG0605|consen 218 LIMEYLPGGDMMTLLMR--KDTLTEDWARFYIAETVLAIESIH---QLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD 292 (550)
T ss_pred EEEEecCCccHHHHHHh--cCcCchHHHHHHHHHHHHHHHHHH---HcCcccccCChhheeecCCCCEeeccccccchhh
Confidence 99999999999999986 567888889999999999999999 8899999999999999999999999999985332
Q ss_pred CC----------------------CCC-----C------------------ccccccccccccccccccCCcccccCcch
Q 003296 712 PS----------------------KST-----G------------------SLSTVAGSVGYIPPEYAYTMRVTMAGNVY 746 (833)
Q Consensus 712 ~~----------------------~~~-----~------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~ 746 (833)
.. +.. . .....+|||.|||||++.+..|+..+|+|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwW 372 (550)
T KOG0605|consen 293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWW 372 (550)
T ss_pred hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHH
Confidence 10 000 0 01135899999999999999999999999
Q ss_pred hhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCC---CHH
Q 003296 747 SFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARP---KMK 823 (833)
Q Consensus 747 S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp---s~~ 823 (833)
|+|||+|||+.|-+||.+......|........ .+ ..+ .......++.|+|.+|+. ||++|. .++
T Consensus 373 SLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~-~l--------~fP--~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~ 440 (550)
T KOG0605|consen 373 SLGCIMYEMLVGYPPFCSETPQETYRKIVNWRE-TL--------KFP--EEVDLSDEAKDLITRLLC-DPENRLGSKGAE 440 (550)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhh-hc--------cCC--CcCcccHHHHHHHHHHhc-CHHHhcCcccHH
Confidence 999999999999999998776665543322110 00 001 111234688999999999 999996 466
Q ss_pred HHHHH
Q 003296 824 SVLRM 828 (833)
Q Consensus 824 evl~~ 828 (833)
||-+|
T Consensus 441 EIK~H 445 (550)
T KOG0605|consen 441 EIKKH 445 (550)
T ss_pred HHhcC
Confidence 66543
No 24
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-44 Score=375.95 Aligned_cols=239 Identities=21% Similarity=0.290 Sum_probs=199.6
Q ss_pred ccccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEeeCCC
Q 003296 560 LNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPK 639 (833)
Q Consensus 560 ~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey~~~ 639 (833)
.+-+|.|+.|.||.|++ .+..||||+++ +.=..+|+-|++++||||+.+.|+|.....+|||||||+.
T Consensus 129 LeWlGSGaQGAVF~Grl-~netVAVKKV~-----------elkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~ 196 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRL-HNETVAVKKVR-----------ELKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQ 196 (904)
T ss_pred hhhhccCcccceeeeec-cCceehhHHHh-----------hhhhhhHHHHHhccCcceeeEeeeecCCceeEEeeecccc
Confidence 46899999999999998 68899999993 1123688999999999999999999999999999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCcc
Q 003296 640 GTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSL 719 (833)
Q Consensus 640 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~~ 719 (833)
|-|+.+|+. ++.+.......|..+||.|+.||| .+.|||||||+-||||..+..+||+|||.++...... ..
T Consensus 197 GqL~~VLka--~~~itp~llv~Wsk~IA~GM~YLH---~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~S---Tk 268 (904)
T KOG4721|consen 197 GQLYEVLKA--GRPITPSLLVDWSKGIAGGMNYLH---LHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKS---TK 268 (904)
T ss_pred ccHHHHHhc--cCccCHHHHHHHHHHhhhhhHHHH---HhhHhhhccCCCceEeeccceEEeccccchHhhhhhh---hh
Confidence 999999997 567888889999999999999999 7889999999999999999999999999998765432 23
Q ss_pred ccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchhHHH
Q 003296 720 STVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRS 799 (833)
Q Consensus 720 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (833)
..++||..|||||++...+.++|+||||||||||||+||..||.+-...+- .. +.-...+.-.+ +..
T Consensus 269 MSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI----Iw---GVGsNsL~Lpv------Pst 335 (904)
T KOG4721|consen 269 MSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI----IW---GVGSNSLHLPV------PST 335 (904)
T ss_pred hhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee----EE---eccCCcccccC------ccc
Confidence 568999999999999999999999999999999999999999974322110 00 11111111111 123
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 003296 800 QMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831 (833)
Q Consensus 800 ~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~ 831 (833)
++..+.-|+..||+..|..||++++|+.||.=
T Consensus 336 cP~GfklL~Kqcw~sKpRNRPSFrqil~HldI 367 (904)
T KOG4721|consen 336 CPDGFKLLLKQCWNSKPRNRPSFRQILLHLDI 367 (904)
T ss_pred CchHHHHHHHHHHhcCCCCCccHHHHHHHHhh
Confidence 45567778999999999999999999999863
No 25
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.6e-44 Score=396.98 Aligned_cols=257 Identities=21% Similarity=0.273 Sum_probs=208.8
Q ss_pred HhcCCccccccCcccEEEEEEcC------CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCC
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP------SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD 628 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~ 628 (833)
.+-...+.||+|+||+||+|+.. +.+.||||.++..+. .+.+++|.||+++|+.++|||||+++|+|..++
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~---~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~ 562 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAE---NQARQDFRREAELLAELQHPNIVRLLGVCREGD 562 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccccc---HHHHHHHHHHHHHHHhccCCCeEEEEEEEccCC
Confidence 34456789999999999999853 357899999963332 235689999999999999999999999999999
Q ss_pred ceEEEEeeCCCCChhhhhhcCC--------C----CCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCC
Q 003296 629 SAYLFYEYAPKGTLFDVLHGCL--------E----NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSL 696 (833)
Q Consensus 629 ~~~lv~ey~~~g~L~~~l~~~~--------~----~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~ 696 (833)
..|+|+|||..|||.++|..+. . .+++..+.+.||.|||.|++||- ++.+|||||-.+|+|+.++
T Consensus 563 P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs---~~~FVHRDLATRNCLVge~ 639 (774)
T KOG1026|consen 563 PLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLS---SHHFVHRDLATRNCLVGEN 639 (774)
T ss_pred eeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCcccccchhhhhceeccc
Confidence 9999999999999999997432 1 13889999999999999999999 7889999999999999999
Q ss_pred CCceeccceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHh
Q 003296 697 KEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRN 775 (833)
Q Consensus 697 ~~~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~ 775 (833)
..+||+|||++|.....+.........=..+|||||.+..++||++||||||||||||++| |+.||.+-.+- .+...
T Consensus 640 l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~--EVIe~ 717 (774)
T KOG1026|consen 640 LVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQ--EVIEC 717 (774)
T ss_pred eEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchH--HHHHH
Confidence 9999999999997754443322112233578999999999999999999999999999998 89999754321 12222
Q ss_pred hcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 003296 776 SAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831 (833)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~ 831 (833)
..++. + -+.++.++.++.+|+..||+..|++||+++||-..|+.
T Consensus 718 i~~g~---------l---L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~ 761 (774)
T KOG1026|consen 718 IRAGQ---------L---LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQA 761 (774)
T ss_pred HHcCC---------c---ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHH
Confidence 22211 1 11123567789999999999999999999999999885
No 26
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7e-44 Score=383.19 Aligned_cols=254 Identities=20% Similarity=0.243 Sum_probs=208.0
Q ss_pred HHHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhh-ccChhHHHHHHHHHhcCC-CCCcccceEEEecCCc
Q 003296 553 MEAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQ-LGSHHKFDKELEVLGKLS-NSNVMTPLAYVLASDS 629 (833)
Q Consensus 553 ~~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~~ 629 (833)
....|...+.||+|+||+||.|.. .+|..||||.+.++..... ....+...+|+.++++++ ||||+++++++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 345678889999999999999986 5889999997743211101 134556778999999999 9999999999999999
Q ss_pred eEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCC-CCceeccceeee
Q 003296 630 AYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSL-KEPQIGDIELCK 708 (833)
Q Consensus 630 ~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~-~~~ki~dfgl~~ 708 (833)
.|+|||||.+|+|++++.+ .+.+.+.++..++.|++.|++||| +.+|+||||||+|||+|.+ +.+||+|||++.
T Consensus 95 ~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H---~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~ 169 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCH---SRGIVHRDLKPENILLDGNEGNLKLSDFGLSA 169 (370)
T ss_pred EEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEecCCCCCEEEecccccc
Confidence 9999999999999999987 556888999999999999999999 8899999999999999999 999999999999
Q ss_pred eeCCCCCCCccccccccccccccccccCCc-cc-ccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccc
Q 003296 709 VIDPSKSTGSLSTVAGSVGYIPPEYAYTMR-VT-MAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHIL 786 (833)
Q Consensus 709 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (833)
... .......+.+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||++.+... .........-.
T Consensus 170 ~~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~-l~~ki~~~~~~----- 241 (370)
T KOG0583|consen 170 ISP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPN-LYRKIRKGEFK----- 241 (370)
T ss_pred ccC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHH-HHHHHhcCCcc-----
Confidence 874 1122457899999999999999877 86 78999999999999999999998643322 11111111111
Q ss_pred cccccCCchhHHHH-HHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 787 DFNVSRTSLAVRSQ-MLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 787 ~~~~~~~~~~~~~~-~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
++. .. +.++.+++.+|++.||.+|+|+.||+.+
T Consensus 242 ---~p~------~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h 275 (370)
T KOG0583|consen 242 ---IPS------YLLSPEARSLIEKMLVPDPSTRITLLEILEH 275 (370)
T ss_pred ---CCC------CcCCHHHHHHHHHHcCCCcccCCCHHHHhhC
Confidence 111 11 5678899999999999999999999853
No 27
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=2.7e-43 Score=383.58 Aligned_cols=260 Identities=20% Similarity=0.277 Sum_probs=203.8
Q ss_pred HHhcCCccccccCcccEEEEEEc------CCCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEec
Q 003296 554 EAVANPLNVELKTRFSTYYKAVM------PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVLA 626 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~ 626 (833)
.+.|...+.||+|+||.||+|.. .++..||||+++... .....+.+.+|+++++++ +|||||+++++|..
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 82 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA---TASEHKALMSELKILIHIGNHLNVVNLLGACTK 82 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc---chHHHHHHHHHHHHHHHhccCcceeeEEeEecC
Confidence 45788889999999999999974 246789999994221 112346799999999999 89999999999876
Q ss_pred C-CceEEEEeeCCCCChhhhhhcCC-------------------------------------------------------
Q 003296 627 S-DSAYLFYEYAPKGTLFDVLHGCL------------------------------------------------------- 650 (833)
Q Consensus 627 ~-~~~~lv~ey~~~g~L~~~l~~~~------------------------------------------------------- 650 (833)
. +..++||||+++|+|.+++....
T Consensus 83 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (338)
T cd05102 83 PNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQE 162 (338)
T ss_pred CCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchh
Confidence 5 45899999999999999987431
Q ss_pred -----CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCcccccccc
Q 003296 651 -----ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725 (833)
Q Consensus 651 -----~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~~~~~~gt 725 (833)
...+++.++..++.|+++||+||| +.+|+||||||+|||++.++.+|++|||+++...............++
T Consensus 163 ~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~ 239 (338)
T cd05102 163 TDDLWKSPLTMEDLICYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLP 239 (338)
T ss_pred ccccccCCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCC
Confidence 124788899999999999999999 789999999999999999999999999999865432221122334567
Q ss_pred ccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccccccCCchhHHHHHHHH
Q 003296 726 VGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTV 804 (833)
Q Consensus 726 ~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (833)
+.|||||++.+..++.++|||||||++|||++ |+.||.+.......... ....... .. ....+.++
T Consensus 240 ~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~-~~~~~~~------~~------~~~~~~~l 306 (338)
T cd05102 240 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQR-LKDGTRM------RA------PENATPEI 306 (338)
T ss_pred ccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHH-HhcCCCC------CC------CCCCCHHH
Confidence 89999999988889999999999999999997 99999754332222111 1111110 00 01223467
Q ss_pred HHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 805 LKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 805 ~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
.+++.+||+.||++|||+.|+++.|+++
T Consensus 307 ~~li~~cl~~dp~~RPs~~el~~~l~~~ 334 (338)
T cd05102 307 YRIMLACWQGDPKERPTFSALVEILGDL 334 (338)
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 8999999999999999999999999875
No 28
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.1e-44 Score=379.17 Aligned_cols=248 Identities=21% Similarity=0.254 Sum_probs=210.2
Q ss_pred cCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEe
Q 003296 557 ANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYE 635 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 635 (833)
++..+.+|+|+-|.|-.|+. .+|+.+|||.+. +.............+||.+|+-+.||||+++|++|+...++|+|.|
T Consensus 14 wkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~-k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlE 92 (786)
T KOG0588|consen 14 WKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIP-KRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLE 92 (786)
T ss_pred eeccccccCCCCceehhhhcccccceeEEEeec-cccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEE
Confidence 45567899999999999996 699999999995 3322333345678999999999999999999999999999999999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCC
Q 003296 636 YAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715 (833)
Q Consensus 636 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~ 715 (833)
|+++|.|++++-. ++.+++.++.+++.||+.|+.||| ..+|+|||+||+|+|||..+.+||+|||+|..-.++.
T Consensus 93 yv~gGELFdylv~--kG~l~e~eaa~ff~QIi~gv~yCH---~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gk- 166 (786)
T KOG0588|consen 93 YVPGGELFDYLVR--KGPLPEREAAHFFRQILDGVSYCH---AFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGK- 166 (786)
T ss_pred ecCCchhHHHHHh--hCCCCCHHHHHHHHHHHHHHHHHh---hhcceeccCCchhhhhhcccCEeeeccceeecccCCc-
Confidence 9999999999986 567999999999999999999999 7789999999999999999999999999998765443
Q ss_pred CCccccccccccccccccccCCccc-ccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCc
Q 003296 716 TGSLSTVAGSVGYIPPEYAYTMRVT-MAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTS 794 (833)
Q Consensus 716 ~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (833)
...+.||+|.|.|||++.+.+|+ .++||||.|||||.|+||+.||+++ .+........... .
T Consensus 167 --lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd-Nir~LLlKV~~G~--------------f 229 (786)
T KOG0588|consen 167 --LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD-NIRVLLLKVQRGV--------------F 229 (786)
T ss_pred --cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc-cHHHHHHHHHcCc--------------c
Confidence 45678999999999999999996 8999999999999999999999854 3443333222111 1
Q ss_pred hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 795 LAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 795 ~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
..+...+.++.+|+.+|+..||++|.|++||++|
T Consensus 230 ~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 230 EMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred cCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 1112345678899999999999999999999987
No 29
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-44 Score=365.08 Aligned_cols=250 Identities=20% Similarity=0.289 Sum_probs=206.6
Q ss_pred HhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
..|...+.||+|+||.||||.+ .+++.||+|.+.- .......++..+|+.++++++||||.++||.|..+..++++
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~L---e~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~Lwii 89 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDL---EEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWII 89 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEech---hhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHH
Confidence 3466678999999999999997 5899999999942 22233457889999999999999999999999999999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
||||.||++.+.++. ...+++.....|++++..|+.|+| ..+.+|||||+.|||+..+|.+|++|||++..+...
T Consensus 90 Mey~~gGsv~~lL~~--~~~~~E~~i~~ilre~l~~l~ylH---~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~ 164 (467)
T KOG0201|consen 90 MEYCGGGSVLDLLKS--GNILDEFEIAVILREVLKGLDYLH---SEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNT 164 (467)
T ss_pred HHHhcCcchhhhhcc--CCCCccceeeeehHHHHHHhhhhh---hcceecccccccceeEeccCcEEEEecceeeeeech
Confidence 999999999999985 344577778888999999999999 778999999999999999999999999999887644
Q ss_pred CCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCC
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRT 793 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (833)
... ..+++|||.|||||++.+..|+.|+||||+|++.+||++|.+|+.+...+. ..-.+....++.
T Consensus 165 ~~r--r~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr------------vlflIpk~~PP~ 230 (467)
T KOG0201|consen 165 VKR--RKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMR------------VLFLIPKSAPPR 230 (467)
T ss_pred hhc--cccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcce------------EEEeccCCCCCc
Confidence 332 267899999999999998899999999999999999999999997533211 111111111111
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 794 SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 794 ~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
........+.+++..|+++||+.||++.++++|
T Consensus 231 --L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 231 --LDGDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred --cccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 111455678899999999999999999999986
No 30
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-43 Score=373.21 Aligned_cols=257 Identities=23% Similarity=0.296 Sum_probs=204.8
Q ss_pred cCCccccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEee
Q 003296 557 ANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEY 636 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey 636 (833)
......||+|+||+||||.+ -..||||.++..... ....+.|..|+.++++-||.||+-++|||..++. .||..+
T Consensus 394 v~l~~rIGsGsFGtV~Rg~w--hGdVAVK~Lnv~~pt--~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqw 468 (678)
T KOG0193|consen 394 VLLGERIGSGSFGTVYRGRW--HGDVAVKLLNVDDPT--PEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQW 468 (678)
T ss_pred hhccceeccccccceeeccc--ccceEEEEEecCCCC--HHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehh
Confidence 44568999999999999997 456999999643322 2256899999999999999999999999998777 999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCC
Q 003296 637 APKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKST 716 (833)
Q Consensus 637 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~ 716 (833)
|+|-+|+.++|.. +..++..+...||.|||+|+.||| .++|||||+|+.||++.+++.|||+|||++..-......
T Consensus 469 CeGsSLY~hlHv~-etkfdm~~~idIAqQiaqGM~YLH---AK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~ 544 (678)
T KOG0193|consen 469 CEGSSLYTHLHVQ-ETKFDMNTTIDIAQQIAQGMDYLH---AKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGE 544 (678)
T ss_pred ccCchhhhhccch-hhhhhHHHHHHHHHHHHHhhhhhh---hhhhhhhhccccceEEccCCcEEEecccceeeeeeeccc
Confidence 9999999999964 356899999999999999999999 899999999999999999999999999998654322222
Q ss_pred CccccccccccccccccccC---CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCC
Q 003296 717 GSLSTVAGSVGYIPPEYAYT---MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRT 793 (833)
Q Consensus 717 ~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (833)
.......|...|||||+++. .+|++.+||||||||+|||+||..||. .+...+.+.. ...+. +.+ +.
T Consensus 545 ~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys-i~~~dqIifm-VGrG~-----l~p---d~ 614 (678)
T KOG0193|consen 545 QQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS-IQNRDQIIFM-VGRGY-----LMP---DL 614 (678)
T ss_pred cccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC-CCChhheEEE-ecccc-----cCc---cc
Confidence 22344568899999999873 469999999999999999999999997 3332222111 11110 001 11
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 794 SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 794 ~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
.........++.+|+..||..+|++||.+.+|+..|+++
T Consensus 615 s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l 653 (678)
T KOG0193|consen 615 SKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEEL 653 (678)
T ss_pred hhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHh
Confidence 112234566888999999999999999999999987754
No 31
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-43 Score=380.61 Aligned_cols=246 Identities=22% Similarity=0.274 Sum_probs=207.6
Q ss_pred HHHhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCC-CCCcccceEEEecCCce
Q 003296 553 MEAVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLS-NSNVMTPLAYVLASDSA 630 (833)
Q Consensus 553 ~~~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~~~ 630 (833)
..++|....++|+|+||+|+.+..+ +++.+|||.++ ++.+....+.+....|.+|+.-.. ||.++.++++|+.++++
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LK-K~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l 444 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLK-KGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHL 444 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEee-ccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeE
Confidence 3457888999999999999999974 78999999995 555555667788899999988775 99999999999999999
Q ss_pred EEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeee
Q 003296 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVI 710 (833)
Q Consensus 631 ~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~ 710 (833)
|.||||+.|||+..+.+ ...+++.++..||..|+.||.||| .++||+||||.+|||||.+|++||+|||+||..
T Consensus 445 ~fvmey~~Ggdm~~~~~---~~~F~e~rarfyaAev~l~L~fLH---~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~ 518 (694)
T KOG0694|consen 445 FFVMEYVAGGDLMHHIH---TDVFSEPRARFYAAEVVLGLQFLH---ENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEG 518 (694)
T ss_pred EEEEEecCCCcEEEEEe---cccccHHHHHHHHHHHHHHHHHHH---hcCceeeecchhheEEcccCcEEeccccccccc
Confidence 99999999999666655 356999999999999999999999 899999999999999999999999999999975
Q ss_pred CCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccc
Q 003296 711 DPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNV 790 (833)
Q Consensus 711 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (833)
..... .++++||||.|||||++.+..|+.++|+|||||++|||+.|+.||.+.++.. . .+.++..+
T Consensus 519 m~~g~--~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee-~----------FdsI~~d~- 584 (694)
T KOG0694|consen 519 MGQGD--RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEE-V----------FDSIVNDE- 584 (694)
T ss_pred CCCCC--ccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHH-H----------HHHHhcCC-
Confidence 42222 4578999999999999999999999999999999999999999998654321 1 12222111
Q ss_pred cCCchhHHHHHHHHHHHHHhccCCCCCCCCCH
Q 003296 791 SRTSLAVRSQMLTVLKVAVACVSVSPEARPKM 822 (833)
Q Consensus 791 ~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~ 822 (833)
...+...+.+.+.++.+++.++|++|..+
T Consensus 585 ---~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 585 ---VRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred ---CCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 11223456688899999999999999876
No 32
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.6e-42 Score=366.71 Aligned_cols=249 Identities=18% Similarity=0.239 Sum_probs=199.8
Q ss_pred ccccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEec----CCceEEEEe
Q 003296 560 LNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLA----SDSAYLFYE 635 (833)
Q Consensus 560 ~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~----~~~~~lv~e 635 (833)
...||+|++|.||+|.. +|+.||||+++.... ......+.|.+|+++|++++|||||+++|++.+ ....++|||
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~E 102 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHK-GHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILE 102 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEecccccc-ccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEE
Confidence 46899999999999998 789999999953211 111124678899999999999999999999977 346899999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCC
Q 003296 636 YAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715 (833)
Q Consensus 636 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~ 715 (833)
|+++|+|.++++. ...++|..+..++.|++.|++|||. ..+++||||||+||++++++.+|++|||+++......
T Consensus 103 y~~~g~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lH~--~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~- 177 (283)
T PHA02988 103 YCTRGYLREVLDK--EKDLSFKTKLDMAIDCCKGLYNLYK--YTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP- 177 (283)
T ss_pred eCCCCcHHHHHhh--CCCCChhHHHHHHHHHHHHHHHHHh--cCCCCCCcCChhhEEECCCCcEEEcccchHhhhcccc-
Confidence 9999999999986 3468999999999999999999994 2478899999999999999999999999998654321
Q ss_pred CCccccccccccccccccccC--CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCC
Q 003296 716 TGSLSTVAGSVGYIPPEYAYT--MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRT 793 (833)
Q Consensus 716 ~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (833)
....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+... .+............ ..+
T Consensus 178 ----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~-~~~~~~i~~~~~~~------~~~-- 244 (283)
T PHA02988 178 ----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT-KEIYDLIINKNNSL------KLP-- 244 (283)
T ss_pred ----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH-HHHHHHHHhcCCCC------CCC--
Confidence 23568999999999875 6799999999999999999999999975432 22222111111110 011
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 794 SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 794 ~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
...+.++.+++.+||+.||++|||++|+++.|++.
T Consensus 245 ----~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~ 279 (283)
T PHA02988 245 ----LDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLY 279 (283)
T ss_pred ----CcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence 12345688999999999999999999999999864
No 33
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=8.9e-43 Score=342.46 Aligned_cols=264 Identities=19% Similarity=0.186 Sum_probs=211.8
Q ss_pred HhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecC--CceE
Q 003296 555 AVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS--DSAY 631 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~--~~~~ 631 (833)
+.|+..+.|++|+||.||+|++ +++..||.|+++... ...+-.-.-.|||.+|.+++|||||.+..+.... +.+|
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmek--ek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy 153 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEK--EKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIY 153 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeeccccc--ccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceee
Confidence 3566788999999999999998 489999999995332 2233334568999999999999999999998864 5799
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeC
Q 003296 632 LFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711 (833)
Q Consensus 632 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~ 711 (833)
+|||||+. ||..+++... .++...+.+.++.|+++|++||| ...|+|||+||+|+|+...|.+||+|||+|+.+.
T Consensus 154 ~VMe~~Eh-DLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH---~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 154 IVMEYVEH-DLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLH---DNWILHRDLKTSNLLLSHKGILKIADFGLAREYG 228 (419)
T ss_pred eeHHHHHh-hHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHh---hceeEecccchhheeeccCCcEEecccchhhhhc
Confidence 99999988 9999998753 56888999999999999999999 7889999999999999999999999999999876
Q ss_pred CCCCCCccccccccccccccccccCC-cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccc
Q 003296 712 PSKSTGSLSTVAGSVGYIPPEYAYTM-RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNV 790 (833)
Q Consensus 712 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (833)
... ..++..+-|.+|.|||.+.+. .|+++.|+||+|||+.||+++++-|.+..++.+.-.....-+ ...+.+.+.+
T Consensus 229 sp~--k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llG-tPte~iwpg~ 305 (419)
T KOG0663|consen 229 SPL--KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLG-TPSEAIWPGY 305 (419)
T ss_pred CCc--ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhC-CCccccCCCc
Confidence 443 244667789999999998875 499999999999999999999999998888776544433322 2222222222
Q ss_pred cCCc-----------h-----hHHH--HHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 791 SRTS-----------L-----AVRS--QMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 791 ~~~~-----------~-----~~~~--~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
...+ . .+.. ......+++...+..||++|.|+.|.++|
T Consensus 306 ~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 306 SELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred cccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 1110 0 0011 23677899999999999999999999875
No 34
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2.4e-42 Score=366.44 Aligned_cols=252 Identities=19% Similarity=0.207 Sum_probs=203.2
Q ss_pred cCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEe
Q 003296 557 ANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYE 635 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 635 (833)
|+..+.||+|+||.||+|.. .+|+.||||++... ..........+.+|++++++++|||||+++++|.+++..++|||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~-~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKK-RIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHh-hhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 66778999999999999997 58999999998422 22222334568899999999999999999999999999999999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCC
Q 003296 636 YAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715 (833)
Q Consensus 636 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~ 715 (833)
||++|+|.+++.......+++.++..++.|++.||+||| +.+|+||||||+|||+++++.+|++|||+++......
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~- 156 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQ---RERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE- 156 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC-
Confidence 999999998887544456899999999999999999999 7899999999999999999999999999998754322
Q ss_pred CCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHH--HHHhhcccccccccccccccCC
Q 003296 716 TGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKW--VLRNSAQQDKLDHILDFNVSRT 793 (833)
Q Consensus 716 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 793 (833)
......||+.|||||++.+..++.++|||||||++|||++|+.||......... +...... ....
T Consensus 157 --~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~---------~~~~-- 223 (285)
T cd05631 157 --TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKE---------DQEE-- 223 (285)
T ss_pred --eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhc---------cccc--
Confidence 123467999999999999989999999999999999999999999854332111 1110000 0000
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHH
Q 003296 794 SLAVRSQMLTVLKVAVACVSVSPEARPK-----MKSVLRM 828 (833)
Q Consensus 794 ~~~~~~~~~~~~~l~~~cl~~dP~~Rps-----~~evl~~ 828 (833)
.....+.++.+++.+||+.||++||+ ++|+++|
T Consensus 224 --~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 224 --YSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred --CCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 01123456789999999999999997 8888875
No 35
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3e-44 Score=337.59 Aligned_cols=256 Identities=20% Similarity=0.254 Sum_probs=208.5
Q ss_pred HHHHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCce
Q 003296 552 AMEAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSA 630 (833)
Q Consensus 552 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~ 630 (833)
..++.|+..++||+|+|+.||++.. ++|+.+|+|.++.+ + ....+.++..+|++|-+.++|||||++.+.+.+....
T Consensus 8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~-k-~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ 85 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK-K-LSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFH 85 (355)
T ss_pred ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhh-h-hccccHHHHHHHHHHHHhcCCCcEeehhhhhccccee
Confidence 3456677788999999999999986 68999999999532 2 2233678899999999999999999999999999999
Q ss_pred EEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCC---CCceeccceee
Q 003296 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSL---KEPQIGDIELC 707 (833)
Q Consensus 631 ~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~---~~~ki~dfgl~ 707 (833)
|+|+|+|.||+|..-+-. ....++..+-.++.||++||.|+| .++|||||+||+|+++.+. --+|++|||+|
T Consensus 86 ylvFe~m~G~dl~~eIV~--R~~ySEa~aSH~~rQiLeal~yCH---~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvA 160 (355)
T KOG0033|consen 86 YLVFDLVTGGELFEDIVA--REFYSEADASHCIQQILEALAYCH---SNGIVHRDLKPENLLLASKAKGAAVKLADFGLA 160 (355)
T ss_pred EEEEecccchHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeeeeccCCCceeecccceE
Confidence 999999999999876543 245778888889999999999999 8999999999999999633 35799999999
Q ss_pred eeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccccccc
Q 003296 708 KVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILD 787 (833)
Q Consensus 708 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (833)
..+..+. ...+.+|||+|||||++...+|+..+|||+-|||||-++.|.+||.+...-. ..... ..
T Consensus 161 i~l~~g~---~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~r-lye~I----------~~ 226 (355)
T KOG0033|consen 161 IEVNDGE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR-LYEQI----------KA 226 (355)
T ss_pred EEeCCcc---ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHH-HHHHH----------hc
Confidence 9887332 3467899999999999999999999999999999999999999998643211 11111 11
Q ss_pred ccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 788 FNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
....-..+.+....+++.+++.+||..||++|.|+.|.++|
T Consensus 227 g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~H 267 (355)
T KOG0033|consen 227 GAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKH 267 (355)
T ss_pred cccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCC
Confidence 11111222334556788899999999999999999999875
No 36
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.3e-43 Score=335.40 Aligned_cols=258 Identities=19% Similarity=0.290 Sum_probs=214.1
Q ss_pred HHHHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhh----ccChhHHHHHHHHHhcCC-CCCcccceEEEe
Q 003296 552 AMEAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQ----LGSHHKFDKELEVLGKLS-NSNVMTPLAYVL 625 (833)
Q Consensus 552 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~----~~~~~~~~~E~~~l~~l~-H~niv~~~~~~~ 625 (833)
..-+.|+..+++|.|..++|-++.. ++|+++|||++........ ....++-.+|+.||+++. ||+|+++.++|+
T Consensus 14 ~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye 93 (411)
T KOG0599|consen 14 GFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE 93 (411)
T ss_pred hHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc
Confidence 4456788899999999999999986 5899999999953322111 112355678999999985 999999999999
Q ss_pred cCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccce
Q 003296 626 ASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIE 705 (833)
Q Consensus 626 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfg 705 (833)
.+..+++|+|.|+.|.|+|+|.. ...+++.+..+|+.|+.+|+.||| ...|||||+||+|||+|+++.+||+|||
T Consensus 94 s~sF~FlVFdl~prGELFDyLts--~VtlSEK~tR~iMrqlfegVeylH---a~~IVHRDLKpENILlddn~~i~isDFG 168 (411)
T KOG0599|consen 94 SDAFVFLVFDLMPRGELFDYLTS--KVTLSEKETRRIMRQLFEGVEYLH---ARNIVHRDLKPENILLDDNMNIKISDFG 168 (411)
T ss_pred CcchhhhhhhhcccchHHHHhhh--heeecHHHHHHHHHHHHHHHHHHH---HhhhhhcccChhheeeccccceEEeccc
Confidence 99999999999999999999986 567999999999999999999999 8899999999999999999999999999
Q ss_pred eeeeeCCCCCCCccccccccccccccccccC------CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccc
Q 003296 706 LCKVIDPSKSTGSLSTVAGSVGYIPPEYAYT------MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQ 779 (833)
Q Consensus 706 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 779 (833)
+|..+.+++ .....||||+|.|||.+.+ ..|+..+|+||.||++|.++.|.+||.....+. +
T Consensus 169 Fa~~l~~Ge---kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQml--M------- 236 (411)
T KOG0599|consen 169 FACQLEPGE---KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQML--M------- 236 (411)
T ss_pred eeeccCCch---hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHH--H-------
Confidence 999887665 3467899999999998763 348899999999999999999999996322211 1
Q ss_pred ccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 780 DKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
++-++........+.+.+.+..+.+++.+|++.||.+|.|++|+++|
T Consensus 237 --LR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 237 --LRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred --HHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 11122223333445566778889999999999999999999999876
No 37
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-42 Score=355.26 Aligned_cols=259 Identities=21% Similarity=0.221 Sum_probs=203.7
Q ss_pred HHHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhh----------ccChhHHHHHHHHHhcCCCCCcccce
Q 003296 553 MEAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQ----------LGSHHKFDKELEVLGKLSNSNVMTPL 621 (833)
Q Consensus 553 ~~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~----------~~~~~~~~~E~~~l~~l~H~niv~~~ 621 (833)
.-+.|+....||+|.||.|-+|.. .+++.||||++.+...... ....+...+||.||++++|||||+++
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 346788889999999999999997 4899999999964322211 11235789999999999999999999
Q ss_pred EEEecC--CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCc
Q 003296 622 AYVLAS--DSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEP 699 (833)
Q Consensus 622 ~~~~~~--~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ 699 (833)
++..++ +.+|||+|||..|.+...=.. ...++..++++|+.++..||+||| ..+||||||||+|+|++++|++
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w~p~d--~~els~~~Ar~ylrDvv~GLEYLH---~QgiiHRDIKPsNLLl~~~g~V 249 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKWCPPD--KPELSEQQARKYLRDVVLGLEYLH---YQGIIHRDIKPSNLLLSSDGTV 249 (576)
T ss_pred EeecCcccCceEEEEEeccCCccccCCCC--cccccHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEEcCCCcE
Confidence 998875 579999999999987654322 223899999999999999999999 7899999999999999999999
Q ss_pred eeccceeeeeeCCCCCC---CccccccccccccccccccCCc---c-cccCcchhhHHHHHHHHhCCCcccCCccHHHHH
Q 003296 700 QIGDIELCKVIDPSKST---GSLSTVAGSVGYIPPEYAYTMR---V-TMAGNVYSFGVILLELLTGKTAVNQGNELAKWV 772 (833)
Q Consensus 700 ki~dfgl~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~---~-~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~ 772 (833)
||+|||.+.....+... ......+|||.|||||.+.++. + +.+.||||+||+||.|+.|+.||.+...+.-
T Consensus 250 KIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l-- 327 (576)
T KOG0585|consen 250 KISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELEL-- 327 (576)
T ss_pred EeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHH--
Confidence 99999999876333211 1234578999999999987633 3 5889999999999999999999976544322
Q ss_pred HHhhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 003296 773 LRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRML 829 (833)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L 829 (833)
.++++...+..+. ..+...++.+++.++|++||++|.+..||..|.
T Consensus 328 ---------~~KIvn~pL~fP~--~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hp 373 (576)
T KOG0585|consen 328 ---------FDKIVNDPLEFPE--NPEINEDLKDLIKRLLEKDPEQRITLPDIKLHP 373 (576)
T ss_pred ---------HHHHhcCcccCCC--cccccHHHHHHHHHHhhcChhheeehhhheecc
Confidence 2223332222211 123456788999999999999999999997763
No 38
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.2e-43 Score=352.18 Aligned_cols=250 Identities=20% Similarity=0.246 Sum_probs=212.5
Q ss_pred HHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEE
Q 003296 554 EAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYL 632 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 632 (833)
...|++.+.+|+|.||.|-+|.. ..|+.||||.+ +++++.+.++...+.+||+||+.++||||+++|.+|+..+...|
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsI-rKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvi 130 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSI-RKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVI 130 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhh-hhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEE
Confidence 34566778999999999999996 68999999999 56666666777889999999999999999999999999999999
Q ss_pred EEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCC
Q 003296 633 FYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDP 712 (833)
Q Consensus 633 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~ 712 (833)
||||..+|+|+|++.+ .+.+++.+...+++||..|+.|+| .++++|||+|.+|||+|.++.+||+|||++..+..
T Consensus 131 vMEYaS~GeLYDYiSe--r~~LsErEaRhfFRQIvSAVhYCH---knrVvHRDLKLENILLD~N~NiKIADFGLSNly~~ 205 (668)
T KOG0611|consen 131 VMEYASGGELYDYISE--RGSLSEREARHFFRQIVSAVHYCH---KNRVVHRDLKLENILLDQNNNIKIADFGLSNLYAD 205 (668)
T ss_pred EEEecCCccHHHHHHH--hccccHHHHHHHHHHHHHHHHHHh---hccceecccchhheeecCCCCeeeeccchhhhhcc
Confidence 9999999999999987 456999999999999999999999 89999999999999999999999999999987754
Q ss_pred CCCCCccccccccccccccccccCCccc-ccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccccccccccc
Q 003296 713 SKSTGSLSTVAGSVGYIPPEYAYTMRVT-MAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVS 791 (833)
Q Consensus 713 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (833)
.. -..++||+|-|.+||++.+.+|. +.+|-||+||+||.++.|..||++.+.. ..+.+.. . ..+.
T Consensus 206 ~k---fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk-~lvrQIs-~---------GaYr 271 (668)
T KOG0611|consen 206 KK---FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHK-RLVRQIS-R---------GAYR 271 (668)
T ss_pred cc---HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHH-HHHHHhh-c---------cccc
Confidence 43 45789999999999999999985 8899999999999999999999865432 1221111 1 0111
Q ss_pred CCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 792 RTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 792 ~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.+ ..+..+.-+|..||..+|++|.|+.+|..|
T Consensus 272 EP-----~~PSdA~gLIRwmLmVNP~RRATieDiAsH 303 (668)
T KOG0611|consen 272 EP-----ETPSDASGLIRWMLMVNPERRATIEDIASH 303 (668)
T ss_pred CC-----CCCchHHHHHHHHHhcCcccchhHHHHhhh
Confidence 11 122345678999999999999999999876
No 39
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=9.1e-42 Score=368.48 Aligned_cols=245 Identities=19% Similarity=0.223 Sum_probs=198.8
Q ss_pred cccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEeeCCC
Q 003296 561 NVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPK 639 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey~~~ 639 (833)
++||+|+||.||+|+. .+|+.||||+++. ...........+.+|++++++++||||+++++++..++..|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~-~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~ 79 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKK-EVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEH-HHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCC
Confidence 4699999999999997 4789999999942 2222223345788999999999999999999999999999999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCcc
Q 003296 640 GTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSL 719 (833)
Q Consensus 640 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~~ 719 (833)
|+|.+++.. ...+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....... ..
T Consensus 80 ~~L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~--~~ 152 (323)
T cd05571 80 GELFFHLSR--ERVFSEDRARFYGAEIVSALGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGA--TM 152 (323)
T ss_pred CcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCC--cc
Confidence 999999976 456899999999999999999999 78999999999999999999999999999875422211 22
Q ss_pred ccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchhHHH
Q 003296 720 STVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRS 799 (833)
Q Consensus 720 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (833)
...+||+.|||||++.+..++.++||||+||++|||++|+.||....... ......... ..++ ..
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~-~~~~~~~~~--------~~~p------~~ 217 (323)
T cd05571 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK-LFELILMEE--------IRFP------RT 217 (323)
T ss_pred cceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHH-HHHHHHcCC--------CCCC------CC
Confidence 45689999999999998899999999999999999999999997543221 111111110 0111 12
Q ss_pred HHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 003296 800 QMLTVLKVAVACVSVSPEARP-----KMKSVLRM 828 (833)
Q Consensus 800 ~~~~~~~l~~~cl~~dP~~Rp-----s~~evl~~ 828 (833)
...++.+++.+||+.||++|| ++.|+++|
T Consensus 218 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 218 LSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred CCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 345678999999999999999 79998864
No 40
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=9.2e-42 Score=375.35 Aligned_cols=260 Identities=22% Similarity=0.285 Sum_probs=204.4
Q ss_pred HHhcCCccccccCcccEEEEEEc------CCCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEec
Q 003296 554 EAVANPLNVELKTRFSTYYKAVM------PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVLA 626 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~ 626 (833)
.++|+..+.||+|+||.||+|+. .++..||||+++... .....+.+.+|+++++.+ +|||||+++++|..
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~ 110 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA---HLTEREALMSELKVLSYLGNHINIVNLLGACTV 110 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc---CcHHHHHHHHHHHHHHHhcCCcceeeeeeeecc
Confidence 34678889999999999999973 356789999995221 122346789999999999 89999999999999
Q ss_pred CCceEEEEeeCCCCChhhhhhcCC--------------------------------------------------------
Q 003296 627 SDSAYLFYEYAPKGTLFDVLHGCL-------------------------------------------------------- 650 (833)
Q Consensus 627 ~~~~~lv~ey~~~g~L~~~l~~~~-------------------------------------------------------- 650 (833)
.+..++|||||++|+|.++++...
T Consensus 111 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (375)
T cd05104 111 GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVR 190 (375)
T ss_pred CCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccc
Confidence 999999999999999999986421
Q ss_pred -----------------CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 651 -----------------ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 651 -----------------~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
...++|..+..++.|+++||+||| +.+|+||||||+||+++.++.+|++|||+++.....
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 267 (375)
T cd05104 191 SGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIRND 267 (375)
T ss_pred cceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCchhhEEEECCCcEEEecCccceeccCc
Confidence 124789999999999999999999 789999999999999999999999999999876433
Q ss_pred CCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccccccC
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSR 792 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 792 (833)
..........++..|||||++.+..++.++|||||||++|||++ |..||............. ...... ..+
T Consensus 268 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~-~~~~~~------~~~- 339 (375)
T cd05104 268 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMI-KEGYRM------LSP- 339 (375)
T ss_pred ccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHH-HhCccC------CCC-
Confidence 22111123345678999999998899999999999999999998 888987543222221111 110000 000
Q ss_pred CchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 793 TSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 793 ~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
...+.++.+++.+||+.||++||||.||+++|++.
T Consensus 340 -----~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 340 -----ECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred -----CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 01234678999999999999999999999999864
No 41
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-42 Score=348.66 Aligned_cols=258 Identities=20% Similarity=0.245 Sum_probs=201.2
Q ss_pred hcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCC-----c
Q 003296 556 VANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD-----S 629 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~-----~ 629 (833)
.|...+++|.|+||.||+|+. .+++.||||++ +.++. -=.+|+++|++++|||||++.-+|.... .
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv-~~d~r-------~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ 96 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKV-LQDKR-------YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVY 96 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEe-cCCCC-------cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhH
Confidence 355678999999999999997 46899999999 44432 2247999999999999999998887532 3
Q ss_pred eEEEEeeCCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCC-CCceecccee
Q 003296 630 AYLFYEYAPKGTLFDVLHGC--LENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSL-KEPQIGDIEL 706 (833)
Q Consensus 630 ~~lv~ey~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~-~~~ki~dfgl 706 (833)
..+||||||. +|.++++.- ....++...++-++.|+.+||+||| ..+|+||||||+|+|+|.+ |.+||||||.
T Consensus 97 lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh---~~~IcHRDIKPqNlLvD~~tg~LKicDFGS 172 (364)
T KOG0658|consen 97 LNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLH---SHGICHRDIKPQNLLVDPDTGVLKICDFGS 172 (364)
T ss_pred HHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHH---hcCcccCCCChheEEEcCCCCeEEeccCCc
Confidence 5689999998 999999842 1345777778889999999999999 7899999999999999966 8999999999
Q ss_pred eeeeCCCCCCCccccccccccccccccccCC-cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccc--
Q 003296 707 CKVIDPSKSTGSLSTVAGSVGYIPPEYAYTM-RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLD-- 783 (833)
Q Consensus 707 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-- 783 (833)
|+.+..++.. .+..-|..|.|||.+.+. .|+.+.||||.|||+.||+-|++-|.+.....+.+.....-+..-+
T Consensus 173 AK~L~~~epn---iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~ 249 (364)
T KOG0658|consen 173 AKVLVKGEPN---ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTRED 249 (364)
T ss_pred ceeeccCCCc---eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHH
Confidence 9998766643 456679999999988764 5999999999999999999999999987766655433222111111
Q ss_pred ---------ccccccccCCch---hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 784 ---------HILDFNVSRTSL---AVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 784 ---------~~~~~~~~~~~~---~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
+.-.+.+..... .......+.++++.++++.+|.+|.++.|++.|
T Consensus 250 I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 250 IKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred HhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 111111111110 122345688999999999999999999999875
No 42
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-43 Score=367.92 Aligned_cols=389 Identities=25% Similarity=0.319 Sum_probs=263.1
Q ss_pred CCEEECCCCCCCCcc--cccC--CCCCCEEECCCCCCCCcccccccCCCCCCEEeCcCCcCCCCCCcccCCCCCCCEEEc
Q 003296 10 LKLLNFSKNELVSLP--TFNG--FAGLEVLDFSSNNLNGNINLQFDELVSLKSLNLSKNKFNGFLPINLGKTKALEELVL 85 (833)
Q Consensus 10 L~~L~ls~N~l~~i~--~f~~--l~~L~~L~Ls~N~l~~~~~~~f~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 85 (833)
-..|||+++.|..+. .+.+ .+.-+.||+|+|+|+.+....|.++++|+.++|.+|.++ .+|...+...+|+.|+|
T Consensus 54 ~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L 132 (873)
T KOG4194|consen 54 TRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDL 132 (873)
T ss_pred ceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEee
Confidence 457899999998872 2333 345677999999999999999999999999999999998 46766667777999999
Q ss_pred cCCcCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCcEEECcCCcCCCCCCcccccCCccCcccccccccccc
Q 003296 86 SGNAFHGEIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQNKFSGS 165 (833)
Q Consensus 86 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~ 165 (833)
.+|.|+.+...++..++.|+.||||.|.|+.+...+|..=.++++|+|++|.|+..-...|.++.+|
T Consensus 133 ~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL------------- 199 (873)
T KOG4194|consen 133 RHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSL------------- 199 (873)
T ss_pred eccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchh-------------
Confidence 9999998888899999999999999999998888889888999999999999998888888877664
Q ss_pred CChhhhhcCCEEecccccccccCCccCCCCCCCCEEecccccCcccCCCCCC--cCCcEEEcCCccccCCCCccccCCCC
Q 003296 166 VPGGITRFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMS--PNLVRLRLGTNLLIGEIPSATFTSLE 243 (833)
Q Consensus 166 ~p~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~n~l~~~~~~~~f~~l~ 243 (833)
..|.|+.|+++...+..|.++++|+.|||..|+|.-.--..|. ++|+.|.+..|.+. .+..+.|-.+.
T Consensus 200 ---------~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~-kL~DG~Fy~l~ 269 (873)
T KOG4194|consen 200 ---------LTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDIS-KLDDGAFYGLE 269 (873)
T ss_pred ---------eeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcc-cccCcceeeec
Confidence 4555666666666666666777777777777776511001111 23333333333322 23444455555
Q ss_pred CCCEEECCCCCCCCCCCccccCCCCCcEEEccCCccCCCChhhhCCCCCCcEEEccCCcCCCcCchhhcCCCcCceeecc
Q 003296 244 KLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNGSLPIQLGSLGILQVMNLQLNKLSGEIPSQFSQLKLLSTMNIS 323 (833)
Q Consensus 244 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 323 (833)
++++|+|+.|++...-..++-++++|+.|+|++|.|..+-+..+...++|+.|+|++|+|+...+..|..+..|++|+|+
T Consensus 270 kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs 349 (873)
T KOG4194|consen 270 KMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLS 349 (873)
T ss_pred ccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhccc
Confidence 55555555555554444445555555555555555554444455555555555555555555555555555555555555
Q ss_pred CCcCcccCccccccCCCCCEEEccCCccccccCc---cccCCCCCCEEEccCCcCCccCCCCcccccceeeccccccccc
Q 003296 324 WNSLSGSIPSFLSNLTNLVNLNLRQNNLNGSIPN---SITNMRSLIELQLGGNQLSGTIPMMPPRLQIALNLSSNLFEGP 400 (833)
Q Consensus 324 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~---~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~Ls~N~l~~~ 400 (833)
+|+++......|.++++|+.|||++|.++..+.+ .|..+++|+.|+ |.+|++..+
T Consensus 350 ~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~----------------------l~gNqlk~I 407 (873)
T KOG4194|consen 350 HNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLR----------------------LTGNQLKSI 407 (873)
T ss_pred ccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhhee----------------------ecCceeeec
Confidence 5555544444455555555555555555444332 244444444444 445555545
Q ss_pred hhhhhccCCCCCEEecccCcCccccchhccCCCCCCeeeCcCCcc
Q 003296 401 IPTTFARLNGLEVLDLSNNRFSGEIPQLLAQMPTLTQLLLTNNQL 445 (833)
Q Consensus 401 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l 445 (833)
...+|.++.+|+.|||.+|.|..+.|++|..+ .|+.|-+..-.+
T Consensus 408 ~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSssf 451 (873)
T KOG4194|consen 408 PKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSSSF 451 (873)
T ss_pred chhhhccCcccceecCCCCcceeecccccccc-hhhhhhhcccce
Confidence 55789999999999999999999999999999 898887765444
No 43
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.1e-41 Score=368.58 Aligned_cols=248 Identities=17% Similarity=0.217 Sum_probs=203.4
Q ss_pred HhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
++|+..+.||+|+||.||+|... +|+.||||++.. .........+.+.+|++++++++|||||++++++..++..|+|
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~-~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKK-REILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL 96 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEH-HHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence 46778899999999999999974 789999999942 2222233456799999999999999999999999999999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
|||+++|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 97 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 171 (329)
T PTZ00263 97 LEFVVGGELFTHLRK--AGRFPNDVAKFYHAELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR 171 (329)
T ss_pred EcCCCCChHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC
Confidence 999999999999986 346888999999999999999999 789999999999999999999999999999876432
Q ss_pred CCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCC
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRT 793 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (833)
. ...+||+.|+|||++.+..++.++|||||||++|||++|+.||.+......+ ...... .. .++.
T Consensus 172 ~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~-~~i~~~--~~------~~p~- 236 (329)
T PTZ00263 172 T-----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIY-EKILAG--RL------KFPN- 236 (329)
T ss_pred c-----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHH-HHHhcC--Cc------CCCC-
Confidence 2 3467999999999999888999999999999999999999999754432211 111111 00 0111
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHH
Q 003296 794 SLAVRSQMLTVLKVAVACVSVSPEARPK-----MKSVLRM 828 (833)
Q Consensus 794 ~~~~~~~~~~~~~l~~~cl~~dP~~Rps-----~~evl~~ 828 (833)
....++.+++.+||+.||++||+ ++|++.|
T Consensus 237 -----~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 237 -----WFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred -----CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 12345779999999999999997 6888765
No 44
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.2e-41 Score=373.90 Aligned_cols=260 Identities=19% Similarity=0.257 Sum_probs=203.3
Q ss_pred HHhcCCccccccCcccEEEEEEc------CCCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEec
Q 003296 554 EAVANPLNVELKTRFSTYYKAVM------PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVLA 626 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~ 626 (833)
.++|+..+.||+|+||.||+|+. .++..||||+++.... ....+.+.+|+++++++ +|||||+++++|..
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~ 113 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH---TDEREALMSELKILSHLGQHKNIVNLLGACTH 113 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC---HHHHHHHHHHHHHHHhhccCCceeeEeeEecC
Confidence 45788889999999999999984 2346899999952221 12245789999999999 89999999999999
Q ss_pred CCceEEEEeeCCCCChhhhhhcCC--------------------------------------------------------
Q 003296 627 SDSAYLFYEYAPKGTLFDVLHGCL-------------------------------------------------------- 650 (833)
Q Consensus 627 ~~~~~lv~ey~~~g~L~~~l~~~~-------------------------------------------------------- 650 (833)
.+..++|||||++|+|.++++...
T Consensus 114 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (374)
T cd05106 114 GGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQ 193 (374)
T ss_pred CCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccc
Confidence 999999999999999999986421
Q ss_pred ------------CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCc
Q 003296 651 ------------ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGS 718 (833)
Q Consensus 651 ------------~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~ 718 (833)
...++|.++.+++.|+++||+||| +.+|+||||||+|||+++++.+||+|||+++..........
T Consensus 194 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~ 270 (374)
T cd05106 194 SSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLA---SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVV 270 (374)
T ss_pred cccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceee
Confidence 124788999999999999999999 78999999999999999999999999999986543322111
Q ss_pred cccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccccccCCchhH
Q 003296 719 LSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAV 797 (833)
Q Consensus 719 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (833)
.....+++.|||||++.+..++.++|||||||++|||++ |+.||............ ..... ....+.
T Consensus 271 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~-~~~~~------~~~~~~----- 338 (374)
T cd05106 271 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKM-VKRGY------QMSRPD----- 338 (374)
T ss_pred ccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHH-HHccc------CccCCC-----
Confidence 122345678999999988889999999999999999997 99999753322111111 11100 000000
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 798 RSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 798 ~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
..+.++.+++.+||+.||++|||+.||+++|+++
T Consensus 339 -~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 339 -FAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred -CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 1235678999999999999999999999999875
No 45
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=9e-42 Score=363.09 Aligned_cols=247 Identities=19% Similarity=0.243 Sum_probs=202.4
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
+|+..+.||+|+||.||+|... +|+.||||++... ........+.+.+|++++++++||||+++++++.+++..|+||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIP-EVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHH-HHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 5778899999999999999975 7899999998422 2122233567899999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
||+++|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+|++|||+++......
T Consensus 81 e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~ 155 (291)
T cd05612 81 EYVPGGELFSYLRN--SGRFSNSTGLFYASEIVCALEYLH---SKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRT 155 (291)
T ss_pred eCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEEecCcchhccCCc
Confidence 99999999999976 346899999999999999999999 7899999999999999999999999999998654221
Q ss_pred CCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCc
Q 003296 715 STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTS 794 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (833)
...+||+.|+|||++.+..++.++|||||||++|||++|+.||.+..... .......... .+.
T Consensus 156 -----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~--------~~~--- 218 (291)
T cd05612 156 -----WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFG-IYEKILAGKL--------EFP--- 218 (291)
T ss_pred -----ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCc--------CCC---
Confidence 34579999999999998889999999999999999999999997544322 1111111100 011
Q ss_pred hhHHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHH
Q 003296 795 LAVRSQMLTVLKVAVACVSVSPEARPK-----MKSVLRM 828 (833)
Q Consensus 795 ~~~~~~~~~~~~l~~~cl~~dP~~Rps-----~~evl~~ 828 (833)
......+.+++.+||+.||.+||+ ++|+++|
T Consensus 219 ---~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 219 ---RHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred ---ccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 112346789999999999999995 8888765
No 46
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-41 Score=355.48 Aligned_cols=265 Identities=18% Similarity=0.229 Sum_probs=211.3
Q ss_pred HHHHhcCCccccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceE
Q 003296 552 AMEAVANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAY 631 (833)
Q Consensus 552 ~~~~~~~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~ 631 (833)
.......+.+.||+|.||.|..|....+..||||+++..+ ....+++|.+||++|.+++|||||+++|+|..++.++
T Consensus 535 fPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a---~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePic 611 (807)
T KOG1094|consen 535 FPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDA---TKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLC 611 (807)
T ss_pred cchhheehhhhhcCcccceeEEEEecCceEEEEeecCccc---chhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchH
Confidence 3344455778999999999999999888999999995332 2234689999999999999999999999999999999
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeC
Q 003296 632 LFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711 (833)
Q Consensus 632 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~ 711 (833)
+|+|||++|||.+++.++....+.-....+|+.|||.|++||. +.++||||+.+.|+|+|.++++||+|||+++.+.
T Consensus 612 mI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLe---s~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~ly 688 (807)
T KOG1094|consen 612 MITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLE---SLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLY 688 (807)
T ss_pred HHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHH---hhchhhccccccceeecCcccEEecCcccccccc
Confidence 9999999999999998754333455567789999999999999 7889999999999999999999999999999776
Q ss_pred CCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh--CCCcccCCcc--HHHHHHHhhccccccccccc
Q 003296 712 PSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT--GKTAVNQGNE--LAKWVLRNSAQQDKLDHILD 787 (833)
Q Consensus 712 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt--g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~ 787 (833)
.++........+-..+|||||.+.-+++++++|||+|||++||+++ ...||.+..+ ..+........+.. +.+
T Consensus 689 sg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~--~~~- 765 (807)
T KOG1094|consen 689 SGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGR--QVV- 765 (807)
T ss_pred cCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCc--cee-
Confidence 6554433334555789999999999999999999999999999865 7889974322 11111111111111 110
Q ss_pred ccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 003296 788 FNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831 (833)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~ 831 (833)
+.. +.-++.++.+++.+||..|.++||+++++...|++
T Consensus 766 --l~~----P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~ 803 (807)
T KOG1094|consen 766 --LSR----PPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQE 803 (807)
T ss_pred --ccC----CCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHH
Confidence 011 12345577899999999999999999999999986
No 47
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=2.6e-41 Score=362.28 Aligned_cols=262 Identities=18% Similarity=0.224 Sum_probs=201.1
Q ss_pred HhcCCccccccCcccEEEEEEcC-----------------CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCc
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP-----------------SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNV 617 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~-----------------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~ni 617 (833)
..|...+.||+|+||.||+|... ++..||||.+..... ....++|.+|++++++++||||
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~h~ni 81 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDAN---KNARNDFLKEVKILSRLKDPNI 81 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCC---HHHHHHHHHHHHHHhhcCCCCe
Confidence 46777889999999999999753 234799999843211 1235679999999999999999
Q ss_pred ccceEEEecCCceEEEEeeCCCCChhhhhhcCC-----------------CCCCCHHHHHHHHHHHHHHHHhhhcCCCCC
Q 003296 618 MTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCL-----------------ENALDWASRYSIAVGVAQGLAFLHGFTSNP 680 (833)
Q Consensus 618 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-----------------~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~ 680 (833)
|++++++...+..++||||+++|+|.+++.... ...++|.++..++.|++.||+||| +.+
T Consensus 82 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~ 158 (304)
T cd05096 82 IRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS---SLN 158 (304)
T ss_pred eEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH---HCC
Confidence 999999999999999999999999999986421 124788999999999999999999 788
Q ss_pred eeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh--C
Q 003296 681 ILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT--G 758 (833)
Q Consensus 681 iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt--g 758 (833)
|+||||||+|||+++++.+||+|||+++...............++..|||||++.+..++.++|||||||++|||++ +
T Consensus 159 ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~ 238 (304)
T cd05096 159 FVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCK 238 (304)
T ss_pred ccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccC
Confidence 99999999999999999999999999986643322112233456889999999988889999999999999999987 5
Q ss_pred CCcccCCccHH--HHHHHhhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 003296 759 KTAVNQGNELA--KWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831 (833)
Q Consensus 759 ~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~ 831 (833)
..||.+..... ..+......... .. . .... ...+..+.+++.+||+.||++||||.||.+.|++
T Consensus 239 ~~p~~~~~~~~~~~~~~~~~~~~~~--~~-~--~~~~----~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 239 EQPYGELTDEQVIENAGEFFRDQGR--QV-Y--LFRP----PPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCCCCcCCHHHHHHHHHHHhhhccc--cc-c--ccCC----CCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 56776432211 111111111000 00 0 0000 1223568899999999999999999999998864
No 48
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-42 Score=369.26 Aligned_cols=254 Identities=20% Similarity=0.249 Sum_probs=200.7
Q ss_pred CccccccCcccEEEEEEcC--CC---ceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 559 PLNVELKTRFSTYYKAVMP--SG---MSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 559 ~~~~ig~g~~g~vy~~~~~--~~---~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
..+.||+|+||.||+|++. ++ ..||||..+... .......++|.+|+++|++++|||||++||++..+..+|+|
T Consensus 161 l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~-~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~iv 239 (474)
T KOG0194|consen 161 LGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSS-ELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLV 239 (474)
T ss_pred ccceeecccccEEEEEEEEecCCceeeeeEEEeecccc-cccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEE
Confidence 3479999999999999974 23 238999984211 12233467999999999999999999999999999999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
||+|+||+|.++|++... .++..++..++.++|+||+||| +.++|||||-.+|+|++.++.+||+|||+++.....
T Consensus 240 mEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh---~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~ 315 (474)
T KOG0194|consen 240 MELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLH---SKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQY 315 (474)
T ss_pred EEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHH---HCCCcchhHhHHHheecCCCeEEeCccccccCCcce
Confidence 999999999999997432 6999999999999999999999 889999999999999999999999999998765311
Q ss_pred CCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccccccC
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSR 792 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 792 (833)
. . ......-...|+|||.+....|++++|||||||++||+.+ |..||.+........ ......... ..
T Consensus 316 ~-~-~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~-kI~~~~~r~--------~~ 384 (474)
T KOG0194|consen 316 V-M-KKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKA-KIVKNGYRM--------PI 384 (474)
T ss_pred e-e-ccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHH-HHHhcCccC--------CC
Confidence 1 1 0001123568999999999999999999999999999999 889998655432111 110111100 00
Q ss_pred CchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 793 TSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 793 ~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
+ ...+.++..++.+||+.||++||+|.+|.+.++.+
T Consensus 385 ~----~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~ 420 (474)
T KOG0194|consen 385 P----SKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEAL 420 (474)
T ss_pred C----CCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHH
Confidence 0 12345677788899999999999999999998864
No 49
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=8.8e-42 Score=366.88 Aligned_cols=243 Identities=19% Similarity=0.219 Sum_probs=196.7
Q ss_pred cccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEeeCCCCC
Q 003296 563 ELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGT 641 (833)
Q Consensus 563 ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey~~~g~ 641 (833)
||+|+||.||+|... +++.||+|++.. ...........+.+|++++++++|||||+++++|..++..|+||||+++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~-~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 79 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRK-AHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGE 79 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEH-HHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCc
Confidence 699999999999974 688999999942 222223345678899999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCcccc
Q 003296 642 LFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLST 721 (833)
Q Consensus 642 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~~~~ 721 (833)
|.+++.. ...+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++...... .....
T Consensus 80 L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--~~~~~ 152 (312)
T cd05585 80 LFHHLQR--EGRFDLSRARFYTAELLCALENLH---KFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD--DKTNT 152 (312)
T ss_pred HHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCC--Ccccc
Confidence 9999976 346899999999999999999999 7899999999999999999999999999998643222 12245
Q ss_pred ccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchhHHHHH
Q 003296 722 VAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQM 801 (833)
Q Consensus 722 ~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 (833)
.+||+.|||||++.+..++.++|||||||++|||++|+.||.+... .+.......... .++ ....
T Consensus 153 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~-~~~~~~~~~~~~--------~~~------~~~~ 217 (312)
T cd05585 153 FCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV-NEMYRKILQEPL--------RFP------DGFD 217 (312)
T ss_pred ccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH-HHHHHHHHcCCC--------CCC------CcCC
Confidence 6899999999999998999999999999999999999999975432 222222111100 000 1223
Q ss_pred HHHHHHHHhccCCCCCCCCC---HHHHHHH
Q 003296 802 LTVLKVAVACVSVSPEARPK---MKSVLRM 828 (833)
Q Consensus 802 ~~~~~l~~~cl~~dP~~Rps---~~evl~~ 828 (833)
.++.+++.+||+.||++||+ +.|++.|
T Consensus 218 ~~~~~li~~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 218 RDAKDLLIGLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred HHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence 46789999999999999975 6777654
No 50
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.7e-42 Score=360.55 Aligned_cols=253 Identities=22% Similarity=0.287 Sum_probs=213.2
Q ss_pred HhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCc-eEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDS-AYL 632 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~-~~l 632 (833)
+.|...+++|+|+||.++.++.+ +++.||+|++.-.. .....++...+|+.++++++|||||.+.+.|+.++. .+|
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~--~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~I 81 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEK--LTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCI 81 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccc--cCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEE
Confidence 45777899999999999999874 78899999995222 122334578899999999999999999999999988 999
Q ss_pred EEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCC
Q 003296 633 FYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDP 712 (833)
Q Consensus 633 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~ 712 (833)
||+||+||++.+.+.+.++..+++.+...|+.|++.|+.||| +..|+|||||++||+++++..+|++|||+|+.+.+
T Consensus 82 vm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH---~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~ 158 (426)
T KOG0589|consen 82 VMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLH---ENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNP 158 (426)
T ss_pred EEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH---hhhhhcccchhhhhhccccCceeecchhhhhhcCC
Confidence 999999999999999876667899999999999999999999 88999999999999999999999999999999876
Q ss_pred CCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccC
Q 003296 713 SKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSR 792 (833)
Q Consensus 713 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 792 (833)
... ...+++||+.||.||.+.+.+|..|+||||+||++|||++-+++|.+.+ +...+...... .+++
T Consensus 159 ~~~--~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~-m~~Li~ki~~~------~~~P---- 225 (426)
T KOG0589|consen 159 EDS--LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASN-MSELILKINRG------LYSP---- 225 (426)
T ss_pred chh--hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccc-hHHHHHHHhhc------cCCC----
Confidence 542 3367899999999999999999999999999999999999999997543 33333222211 1111
Q ss_pred CchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 793 TSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 793 ~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.+...+.++..++..|++.+|..||++.|++.+
T Consensus 226 ---lp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 226 ---LPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred ---CCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 112345678889999999999999999999876
No 51
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=2.7e-41 Score=366.26 Aligned_cols=248 Identities=17% Similarity=0.167 Sum_probs=202.4
Q ss_pred HhcCCccccccCcccEEEEEEcC--CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP--SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYL 632 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 632 (833)
++|+..+.||+|+||.||+|... ++..||||++. ..........+.+.+|++++++++|||||++++++.+++..|+
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~-~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFE-KSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEE-HHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 46888899999999999999864 34689999984 2222223345678999999999999999999999999999999
Q ss_pred EEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCC
Q 003296 633 FYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDP 712 (833)
Q Consensus 633 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~ 712 (833)
||||+++|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+|++|||+++....
T Consensus 109 v~Ey~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRR--NKRFPNDVGCFYAAQIVLIFEYLQ---SLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 9999999999999976 346899999999999999999999 78999999999999999999999999999987642
Q ss_pred CCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccC
Q 003296 713 SKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSR 792 (833)
Q Consensus 713 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 792 (833)
. ....+||+.|||||++.+..++.++|||||||++|||++|+.||.+......+.. ...... ..+.
T Consensus 184 ~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~-i~~~~~--------~~p~ 249 (340)
T PTZ00426 184 R-----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQK-ILEGII--------YFPK 249 (340)
T ss_pred C-----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHH-HhcCCC--------CCCC
Confidence 2 1356899999999999888899999999999999999999999986543221111 111100 0010
Q ss_pred CchhHHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 003296 793 TSLAVRSQMLTVLKVAVACVSVSPEARP-----KMKSVLRM 828 (833)
Q Consensus 793 ~~~~~~~~~~~~~~l~~~cl~~dP~~Rp-----s~~evl~~ 828 (833)
.....+.+++.+|++.||++|+ +++|+++|
T Consensus 250 ------~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 250 ------FLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred ------CCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 1234567899999999999995 89998875
No 52
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2.4e-41 Score=367.16 Aligned_cols=255 Identities=16% Similarity=0.176 Sum_probs=205.7
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
+|+..+.||+|+||.||+|+.. +|+.||||++.. .........+.+.+|++++++++|||||++++++...+..|+||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~-~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKK-SLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEH-HHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 4777899999999999999975 689999999942 22222234567899999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
||+++|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 e~~~g~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~-- 153 (333)
T cd05600 81 EYVPGGDFRTLLNN--LGVLSEDHARFYMAEMFEAVDALH---ELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT-- 153 (333)
T ss_pred eCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEEEeCcCCccccc--
Confidence 99999999999975 346899999999999999999999 78999999999999999999999999999986543
Q ss_pred CCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCc
Q 003296 715 STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTS 794 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (833)
......||+.|+|||++.+..++.++|||||||++|||++|+.||........+.... ........ +....
T Consensus 154 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~-~~~~~~~~---~~~~~-- 224 (333)
T cd05600 154 ---YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLK-YWKETLQR---PVYDD-- 224 (333)
T ss_pred ---ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHH-hccccccC---CCCCc--
Confidence 1235679999999999998899999999999999999999999997544322221111 00000000 00000
Q ss_pred hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 795 LAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 795 ~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.....+.++.+++.+|+..+|++||+++|++++
T Consensus 225 -~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 225 -PRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred -cccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 001234578899999999999999999999976
No 53
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=4.3e-41 Score=363.02 Aligned_cols=245 Identities=19% Similarity=0.217 Sum_probs=198.1
Q ss_pred cccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEeeCCC
Q 003296 561 NVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPK 639 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey~~~ 639 (833)
+.||+|+||.||+|.. .+|..||+|++... ..........+.+|++++++++||||++++++|..++..|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKE-VIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHH-HhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCC
Confidence 4689999999999996 47999999999422 212223346788999999999999999999999999999999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCcc
Q 003296 640 GTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSL 719 (833)
Q Consensus 640 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~~ 719 (833)
|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++....... ..
T Consensus 80 ~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~--~~ 152 (323)
T cd05595 80 GELFFHLSR--ERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--TM 152 (323)
T ss_pred CcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCC--cc
Confidence 999999875 346899999999999999999999 78999999999999999999999999999875422221 22
Q ss_pred ccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchhHHH
Q 003296 720 STVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRS 799 (833)
Q Consensus 720 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (833)
....||+.|||||++.+..++.++|||||||++|||++|+.||.......... ....... .++ ..
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~-~~~~~~~--------~~p------~~ 217 (323)
T cd05595 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE-LILMEEI--------RFP------RT 217 (323)
T ss_pred ccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHH-HHhcCCC--------CCC------CC
Confidence 34679999999999998899999999999999999999999997543322111 1111100 011 12
Q ss_pred HHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 003296 800 QMLTVLKVAVACVSVSPEARP-----KMKSVLRM 828 (833)
Q Consensus 800 ~~~~~~~l~~~cl~~dP~~Rp-----s~~evl~~ 828 (833)
...++.+++.+||+.||++|| ++.|++++
T Consensus 218 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 218 LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred CCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 234678999999999999998 89888764
No 54
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=5.5e-41 Score=362.82 Aligned_cols=245 Identities=20% Similarity=0.233 Sum_probs=198.9
Q ss_pred cccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEeeCCC
Q 003296 561 NVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPK 639 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey~~~ 639 (833)
+.||+|+||.||+|.. .+|+.||||++.. ...........+.+|++++++++||||+++++++..++..|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~-~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~ 79 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKK-EVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNG 79 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEH-HHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCC
Confidence 3689999999999996 4799999999942 2222223456789999999999999999999999999999999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCcc
Q 003296 640 GTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSL 719 (833)
Q Consensus 640 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~~ 719 (833)
|+|.+++.. ...+++.++..++.|++.||+||| +.+|+||||||+|||++.++.+|++|||+++...... ...
T Consensus 80 g~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~--~~~ 152 (328)
T cd05593 80 GELFFHLSR--ERVFSEDRTRFYGAEIVSALDYLH---SGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA--ATM 152 (328)
T ss_pred CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcc--ccc
Confidence 999999875 346899999999999999999999 7899999999999999999999999999987543221 122
Q ss_pred ccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchhHHH
Q 003296 720 STVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRS 799 (833)
Q Consensus 720 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (833)
...+||+.|+|||++.+..++.++|||||||++|||++|+.||...... .......... ..++ ..
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~-~~~~~~~~~~--------~~~p------~~ 217 (328)
T cd05593 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-KLFELILMED--------IKFP------RT 217 (328)
T ss_pred ccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH-HHHHHhccCC--------ccCC------CC
Confidence 4568999999999999888999999999999999999999999754322 2211111110 0111 12
Q ss_pred HHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 003296 800 QMLTVLKVAVACVSVSPEARP-----KMKSVLRM 828 (833)
Q Consensus 800 ~~~~~~~l~~~cl~~dP~~Rp-----s~~evl~~ 828 (833)
...++.+++.+||+.||++|| ++.|+++|
T Consensus 218 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 218 LSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 234678899999999999997 89999875
No 55
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=5.1e-41 Score=338.21 Aligned_cols=266 Identities=18% Similarity=0.235 Sum_probs=209.4
Q ss_pred HhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCC-cccceEEEecCC----
Q 003296 555 AVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSN-VMTPLAYVLASD---- 628 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n-iv~~~~~~~~~~---- 628 (833)
..|+..+.+|+|+||+||+|+. .+|+.||+|++.-..+ .++......+|+.++++++|+| ||++++++...+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~--~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~ 88 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFE--EEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRG 88 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEecccc--ccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccc
Confidence 3455667899999999999996 5899999999952222 1345567799999999999999 999999999877
Q ss_pred --ceEEEEeeCCCCChhhhhhcCCC--CCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccc
Q 003296 629 --SAYLFYEYAPKGTLFDVLHGCLE--NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDI 704 (833)
Q Consensus 629 --~~~lv~ey~~~g~L~~~l~~~~~--~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~df 704 (833)
..++|+||++. ||.+++..... ..++...++.++.|+++||+||| +++|+||||||+|||++++|.+|++||
T Consensus 89 ~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H---~~~IlHRDLKPQNlLi~~~G~lKlaDF 164 (323)
T KOG0594|consen 89 IGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLH---SHGILHRDLKPQNLLISSSGVLKLADF 164 (323)
T ss_pred cceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCcceEEECCCCcEeeecc
Confidence 78999999976 99999987543 35777889999999999999999 889999999999999999999999999
Q ss_pred eeeeeeCCCCCCCccccccccccccccccccCC-cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccc---
Q 003296 705 ELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTM-RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQD--- 780 (833)
Q Consensus 705 gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~--- 780 (833)
|+|+...-... ..+..++|..|.|||++.+. .|+...||||+|||++||+++++-|.+..+..+.......-+.
T Consensus 165 GlAra~~ip~~--~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e 242 (323)
T KOG0594|consen 165 GLARAFSIPMR--TYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNE 242 (323)
T ss_pred chHHHhcCCcc--cccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCc
Confidence 99996642222 24567899999999999876 6999999999999999999999999987776655433222111
Q ss_pred -c---ccccccccc--cCCc--hh----HHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 781 -K---LDHILDFNV--SRTS--LA----VRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 781 -~---~~~~~~~~~--~~~~--~~----~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
. .....+... +... .. .........+++.+|++.+|++|.|++.++.|
T Consensus 243 ~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 243 KDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred cCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 1 111111111 1110 00 11112478899999999999999999999987
No 56
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=3.9e-41 Score=357.93 Aligned_cols=265 Identities=16% Similarity=0.154 Sum_probs=203.6
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
+|+..+.||+|+||.||+|+.. +++.||||++.... ......+.+.+|++++++++|||||+++++|..++..|+||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSE--ENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVF 79 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEeccc--ccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEE
Confidence 5778899999999999999985 78999999985321 12233567889999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
||++++.+..+... ...+++..+..++.|++.||+||| ..+|+||||||+||+++.++.+||+|||+++......
T Consensus 80 e~~~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 154 (287)
T cd07848 80 EYVEKNMLELLEEM--PNGVPPEKVRSYIYQLIKAIHWCH---KNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS 154 (287)
T ss_pred ecCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccc
Confidence 99998777655432 346899999999999999999999 7899999999999999999999999999998764322
Q ss_pred CCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccc-------------c
Q 003296 715 STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQD-------------K 781 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~-------------~ 781 (833)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+................ .
T Consensus 155 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07848 155 NA-NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPR 233 (287)
T ss_pred cc-cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccch
Confidence 11 223467999999999998888999999999999999999999999865433322111100000 0
Q ss_pred ccccccccccCCc----hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 782 LDHILDFNVSRTS----LAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 782 ~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
......+...... ......+.++.+++.+||+.||++|||++|+++|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 234 FHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred hcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000000000000 0011234578999999999999999999999875
No 57
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=8.9e-41 Score=362.06 Aligned_cols=263 Identities=17% Similarity=0.214 Sum_probs=203.6
Q ss_pred HHhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEE
Q 003296 554 EAVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYL 632 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 632 (833)
.++|+..+.||+|+||.||+++.. +|..||+|.+.... .....+.|.+|++++++++|||||++++++..++..++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI 80 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc---CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 356888899999999999999975 78999999984221 11234679999999999999999999999999999999
Q ss_pred EEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCC
Q 003296 633 FYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDP 712 (833)
Q Consensus 633 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~ 712 (833)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ ..+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~--~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 156 (331)
T cd06649 81 CMEHMDGGSLDQVLKE--AKRIPEEILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 156 (331)
T ss_pred EeecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhh--cCCEEcCCCChhhEEEcCCCcEEEccCcccccccc
Confidence 9999999999999976 3458999999999999999999994 24699999999999999999999999999876532
Q ss_pred CCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhc---cc-ccccccc--
Q 003296 713 SKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSA---QQ-DKLDHIL-- 786 (833)
Q Consensus 713 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~---~~-~~~~~~~-- 786 (833)
.. .....||+.|+|||++.+..++.++|||||||++|||+||+.||...... +....... .. .......
T Consensus 157 ~~----~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 231 (331)
T cd06649 157 SM----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAK-ELEAIFGRPVVDGEEGEPHSISP 231 (331)
T ss_pred cc----cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHhcccccccccCCccccCc
Confidence 21 23467999999999999888999999999999999999999999643321 11111000 00 0000000
Q ss_pred --------------------------ccccc--CCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 787 --------------------------DFNVS--RTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 787 --------------------------~~~~~--~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
+.... .+.........++.+++.+||+.||++|||++|+++|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 232 RPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred ccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00000 0000001234578899999999999999999999886
No 58
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-43 Score=336.77 Aligned_cols=254 Identities=16% Similarity=0.235 Sum_probs=213.2
Q ss_pred HHHHHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCc
Q 003296 551 KAMEAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDS 629 (833)
Q Consensus 551 ~~~~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~ 629 (833)
+.-++.|+....+|+|+||.||||.. .+|+.||||++... .+.++..+|+.||++++.|+||++||.|.....
T Consensus 29 K~PEEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~------sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sD 102 (502)
T KOG0574|consen 29 KPPEEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD------TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSD 102 (502)
T ss_pred CChHHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc------chHHHHHHHHHHHHHcCCchhhhhhhhhccCCc
Confidence 34455677778999999999999997 48999999999422 346889999999999999999999999999999
Q ss_pred eEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeee
Q 003296 630 AYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKV 709 (833)
Q Consensus 630 ~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~ 709 (833)
+|+|||||-.|+..|.++.+ ...+.+.++..+....++||+||| ...-||||||..|||++.+|.+|++|||+|..
T Consensus 103 LWIVMEYCGAGSiSDI~R~R-~K~L~E~EIs~iL~~TLKGL~YLH---~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQ 178 (502)
T KOG0574|consen 103 LWIVMEYCGAGSISDIMRAR-RKPLSEQEISAVLRDTLKGLQYLH---DLKKIHRDIKAGNILLNTDGIAKLADFGVAGQ 178 (502)
T ss_pred eEeehhhcCCCcHHHHHHHh-cCCccHHHHHHHHHHHHhHHHHHH---HHHHHHhhcccccEEEcccchhhhhhccccch
Confidence 99999999999999999864 457999999999999999999999 67789999999999999999999999999987
Q ss_pred eCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccccccccc
Q 003296 710 IDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFN 789 (833)
Q Consensus 710 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (833)
+...-. ...++.|||.|||||++..-.|++++||||+|++..||..|++||.+-..+...+ ++...
T Consensus 179 LTDTMA--KRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIF------------MIPT~ 244 (502)
T KOG0574|consen 179 LTDTMA--KRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIF------------MIPTK 244 (502)
T ss_pred hhhhHH--hhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeE------------eccCC
Confidence 654322 2257899999999999998899999999999999999999999997543322111 11111
Q ss_pred ccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 790 VSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 790 ~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.++....++..+.++-+++..|+.+.|++|-|+.++++|
T Consensus 245 PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 245 PPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred CCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 222233345667789999999999999999999999886
No 59
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-42 Score=357.39 Aligned_cols=250 Identities=22% Similarity=0.281 Sum_probs=207.4
Q ss_pred HHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEE
Q 003296 554 EAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYL 632 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 632 (833)
+.-|...+.||.|+||.||-|.+ .+...||||++....+... ...+++.+||+.|++++|||+|.+.|+|..+...||
T Consensus 25 Eklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~-EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWL 103 (948)
T KOG0577|consen 25 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSN-EKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWL 103 (948)
T ss_pred HHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccH-HHHHHHHHHHHHHHhccCCCcccccceeeccchHHH
Confidence 34466678999999999999997 5789999999976554332 234679999999999999999999999999999999
Q ss_pred EEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCC
Q 003296 633 FYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDP 712 (833)
Q Consensus 633 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~ 712 (833)
|||||-| +-.|++.-. +.++.+-++..|+.|++.||+||| +.+.||||||..|||+++.|.+|++|||.|..+.+
T Consensus 104 VMEYClG-SAsDlleVh-kKplqEvEIAAi~~gaL~gLaYLH---S~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P 178 (948)
T KOG0577|consen 104 VMEYCLG-SASDLLEVH-KKPLQEVEIAAITHGALQGLAYLH---SHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP 178 (948)
T ss_pred HHHHHhc-cHHHHHHHH-hccchHHHHHHHHHHHHHHHHHHH---HhhHHhhhccccceEecCCCeeeeccccchhhcCc
Confidence 9999965 777776543 346888999999999999999999 77899999999999999999999999999987754
Q ss_pred CCCCCcccccccccccccccccc---CCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccccccccc
Q 003296 713 SKSTGSLSTVAGSVGYIPPEYAY---TMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFN 789 (833)
Q Consensus 713 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (833)
. .+++|||+|||||++. .+.|+-|+||||+||++.|+...++|....+.+....-....+...+.
T Consensus 179 A------nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLq------ 246 (948)
T KOG0577|consen 179 A------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQ------ 246 (948)
T ss_pred h------hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCC------
Confidence 3 4689999999999986 567999999999999999999999998766655444333322222111
Q ss_pred ccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 790 VSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 790 ~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
..+.+..+..++..||++-|.+|||.+++++|
T Consensus 247 -------s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 247 -------SNEWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred -------CchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 12445678889999999999999999999886
No 60
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.3e-40 Score=359.57 Aligned_cols=246 Identities=18% Similarity=0.231 Sum_probs=197.6
Q ss_pred cccccCcccEEEEEEc----CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEee
Q 003296 561 NVELKTRFSTYYKAVM----PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEY 636 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey 636 (833)
+.||+|+||.||+++. .+|+.||||+++.............+.+|++++++++|||||+++++|..++..|+||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999985 368899999995322222223446788999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCC
Q 003296 637 APKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKST 716 (833)
Q Consensus 637 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~ 716 (833)
+++|+|.+++.. ...+.+..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 155 (323)
T cd05584 82 LSGGELFMHLER--EGIFMEDTACFYLSEISLALEHLH---QQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT- 155 (323)
T ss_pred CCCchHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC-
Confidence 999999999976 345788888999999999999999 78999999999999999999999999999875432221
Q ss_pred CccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchh
Q 003296 717 GSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLA 796 (833)
Q Consensus 717 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (833)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .......... .++.
T Consensus 156 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~-~~~~~~~~~~--------~~~~---- 221 (323)
T cd05584 156 -VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKK-TIDKILKGKL--------NLPP---- 221 (323)
T ss_pred -cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHH-HHHHHHcCCC--------CCCC----
Confidence 2234679999999999998889999999999999999999999997544322 1111111100 0110
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 003296 797 VRSQMLTVLKVAVACVSVSPEARP-----KMKSVLRM 828 (833)
Q Consensus 797 ~~~~~~~~~~l~~~cl~~dP~~Rp-----s~~evl~~ 828 (833)
....++.+++.+||+.||++|| ++++++++
T Consensus 222 --~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 222 --YLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred --CCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 1234678999999999999999 78888764
No 61
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-41 Score=388.31 Aligned_cols=256 Identities=23% Similarity=0.340 Sum_probs=205.3
Q ss_pred cCCccccccCcccEEEEEEcC--CCc----eEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCce
Q 003296 557 ANPLNVELKTRFSTYYKAVMP--SGM----SYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSA 630 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~~--~~~----~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~ 630 (833)
-+..+.||+|+||.||+|+.. +|. .||||.+++. .+.+...+|.+|..+|++++|||||+++|.|.+....
T Consensus 694 v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~---~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~ 770 (1025)
T KOG1095|consen 694 VTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL---SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP 770 (1025)
T ss_pred eEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc---CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence 345689999999999999964 343 4999999533 2334568999999999999999999999999999999
Q ss_pred EEEEeeCCCCChhhhhhcCC-----CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccce
Q 003296 631 YLFYEYAPKGTLFDVLHGCL-----ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIE 705 (833)
Q Consensus 631 ~lv~ey~~~g~L~~~l~~~~-----~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfg 705 (833)
++++|||++|||..+|++.+ ...+...+.+.++.|||+|+.||+ ++++|||||..+|+||++...+||+|||
T Consensus 771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe---~~~fvHRDLAaRNCLL~~~r~VKIaDFG 847 (1025)
T KOG1095|consen 771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLE---SKHFVHRDLAARNCLLDERRVVKIADFG 847 (1025)
T ss_pred EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHH---hCCCcCcchhhhheeecccCcEEEcccc
Confidence 99999999999999999753 235888999999999999999999 8899999999999999999999999999
Q ss_pred eeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccc
Q 003296 706 LCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDH 784 (833)
Q Consensus 706 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 784 (833)
+|+.+...+.........-...|||||.+..+.++.|+|||||||++||++| |..||.+..... +......+.+++.
T Consensus 848 lArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~--v~~~~~~ggRL~~ 925 (1025)
T KOG1095|consen 848 LARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFE--VLLDVLEGGRLDP 925 (1025)
T ss_pred hhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHH--HHHHHHhCCccCC
Confidence 9995543332211111122368999999999999999999999999999999 788987544322 1111122222211
Q ss_pred cccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 785 ILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 785 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
+..++..+.+++..||+.+|++||++..+++++..+
T Consensus 926 ------------P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i 961 (1025)
T KOG1095|consen 926 ------------PSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAI 961 (1025)
T ss_pred ------------CCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhh
Confidence 123455777999999999999999999999988765
No 62
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.3e-40 Score=354.47 Aligned_cols=264 Identities=17% Similarity=0.197 Sum_probs=199.2
Q ss_pred hcCCccccccCcccEEEEEEc-C-CCceEEEEEccccchhhhccChhHHHHHHHHHhcC---CCCCcccceEEEec----
Q 003296 556 VANPLNVELKTRFSTYYKAVM-P-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL---SNSNVMTPLAYVLA---- 626 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~-~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l---~H~niv~~~~~~~~---- 626 (833)
.|+..+.||+|+||.||+|+. . +|..||||+++.... .......+.+|+++++++ +|||||+++++|..
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTG--EEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccC--CCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 477889999999999999986 3 578899999843211 122345677888887766 69999999999863
Q ss_pred -CCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccce
Q 003296 627 -SDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIE 705 (833)
Q Consensus 627 -~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfg 705 (833)
....++||||++ |+|.+++.......+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+|++|||
T Consensus 80 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~iiH~dlkp~Nil~~~~~~~kl~Dfg 155 (290)
T cd07862 80 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFG 155 (290)
T ss_pred CCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEcCCCCEEEcccc
Confidence 356899999996 69999997654556899999999999999999999 7899999999999999999999999999
Q ss_pred eeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHh--hccc--cc
Q 003296 706 LCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRN--SAQQ--DK 781 (833)
Q Consensus 706 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~--~~~~--~~ 781 (833)
+++...... ......||+.|+|||++.+..++.++|||||||++|||++|++||.+........... .... ..
T Consensus 156 ~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~ 232 (290)
T cd07862 156 LARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED 232 (290)
T ss_pred ceEeccCCc---ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhh
Confidence 998764332 2245679999999999988889999999999999999999999998655433221111 0000 00
Q ss_pred c-------cccccccccCCch-hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 782 L-------DHILDFNVSRTSL-AVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 782 ~-------~~~~~~~~~~~~~-~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
. ............. ........+.+++.+|++.||++|||+.|+++|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 233 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred chhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 0 0000000000000 001234567799999999999999999999875
No 63
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=2e-40 Score=351.68 Aligned_cols=258 Identities=22% Similarity=0.310 Sum_probs=206.1
Q ss_pred HhcCCccccccCcccEEEEEEcCC------CceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCC
Q 003296 555 AVANPLNVELKTRFSTYYKAVMPS------GMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD 628 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~ 628 (833)
++|+..+.||+|+||.||+|.... ...||+|.++... .....++|.+|++++++++||||+++++++...+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~---~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~ 81 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA---EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQ 81 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC---CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCC
Confidence 467888999999999999998632 2679999984221 1123467999999999999999999999999999
Q ss_pred ceEEEEeeCCCCChhhhhhcCCC--------------CCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeC
Q 003296 629 SAYLFYEYAPKGTLFDVLHGCLE--------------NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLK 694 (833)
Q Consensus 629 ~~~lv~ey~~~g~L~~~l~~~~~--------------~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~ 694 (833)
..+++|||+++|+|.+++..... ..+++.++..++.|++.||+||| ..+|+||||||+||+++
T Consensus 82 ~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nil~~ 158 (283)
T cd05048 82 PTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLS---SHHFVHRDLAARNCLVG 158 (283)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccccceEEEc
Confidence 99999999999999999975321 35889999999999999999999 78899999999999999
Q ss_pred CCCCceeccceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHH
Q 003296 695 SLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVL 773 (833)
Q Consensus 695 ~~~~~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~ 773 (833)
+++.+||+|||+++...............+++.|||||++.+..++.++|||||||++|||++ |..||.+.... +...
T Consensus 159 ~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~-~~~~ 237 (283)
T cd05048 159 EGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ-EVIE 237 (283)
T ss_pred CCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH-HHHH
Confidence 999999999999986543322222234567889999999988889999999999999999998 99999754321 1111
Q ss_pred HhhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 774 RNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
. ... .... . .....+.++.+++.+||+.||++||+++||+++|+.+
T Consensus 238 ~-i~~-~~~~--------~---~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 238 M-IRS-RQLL--------P---CPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred H-HHc-CCcC--------C---CcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 1 111 0000 0 0123456788999999999999999999999999864
No 64
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=8.7e-41 Score=355.06 Aligned_cols=263 Identities=17% Similarity=0.224 Sum_probs=200.8
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
+|...+.||+|+||.||+|... ++..||+|+++... .......+.+|++++++++|||||++++++..++..++||
T Consensus 6 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (288)
T cd07871 6 TYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEH---EEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVF 82 (288)
T ss_pred cceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccc---cCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence 5777899999999999999974 78999999984221 1223457889999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
||+++ +|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||++++++.+|++|||+++......
T Consensus 83 e~~~~-~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~ 157 (288)
T cd07871 83 EYLDS-DLKQYLDNC-GNLMSMHNVKIFMFQLLRGLSYCH---KRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPT 157 (288)
T ss_pred eCCCc-CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCC
Confidence 99975 999988753 335789999999999999999999 7899999999999999999999999999998653222
Q ss_pred CCCccccccccccccccccccC-CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHH--hhcc--ccccc------
Q 003296 715 STGSLSTVAGSVGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLR--NSAQ--QDKLD------ 783 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~--~~~~--~~~~~------ 783 (833)
. ......||+.|+|||++.+ ..++.++||||+||++|||+||+.||.+.......... .... .+...
T Consensus 158 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07871 158 K--TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNE 235 (288)
T ss_pred c--cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccch
Confidence 1 2234578999999998865 56899999999999999999999999754432221111 0000 00000
Q ss_pred ---ccccccccCCch--hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 784 ---HILDFNVSRTSL--AVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 784 ---~~~~~~~~~~~~--~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
....+....... .......++.+++.+|++.||++|||++|+++|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 236 EFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred hhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000000000 001124567899999999999999999999875
No 65
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.3e-40 Score=356.60 Aligned_cols=264 Identities=16% Similarity=0.226 Sum_probs=201.0
Q ss_pred HhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
++|+..+.||+|+||.||+|... +|+.||||++.... .......+.+|++++++++|||||++++++..++..++|
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQE---EEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLV 81 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccc---ccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEE
Confidence 56888899999999999999975 78999999984221 122345678999999999999999999999999999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
|||++ |+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++.....
T Consensus 82 ~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 156 (303)
T cd07869 82 FEYVH-TDLCQYMDKH-PGGLHPENVKLFLFQLLRGLSYIH---QRYILHRDLKPQNLLISDTGELKLADFGLARAKSVP 156 (303)
T ss_pred EECCC-cCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECCCCcceeccCC
Confidence 99996 6888888653 345889999999999999999999 789999999999999999999999999999765322
Q ss_pred CCCCccccccccccccccccccC-CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccc-----ccc---
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDK-----LDH--- 784 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~-----~~~--- 784 (833)
.. ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+..+.............. ...
T Consensus 157 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
T cd07869 157 SH--TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHS 234 (303)
T ss_pred Cc--cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhh
Confidence 21 2234678999999998865 458899999999999999999999998654443322211110000 000
Q ss_pred --ccccc-ccC-CchhHH------HHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 785 --ILDFN-VSR-TSLAVR------SQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 785 --~~~~~-~~~-~~~~~~------~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
..++. ... ...... .....+.+++.+|++.||++|||++|+++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 235 LPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred ccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 00000 000 000000 112467899999999999999999999875
No 66
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.6e-40 Score=348.80 Aligned_cols=257 Identities=16% Similarity=0.197 Sum_probs=203.5
Q ss_pred HHhcCCccccccCcccEEEEEEcC----CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCc
Q 003296 554 EAVANPLNVELKTRFSTYYKAVMP----SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDS 629 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~ 629 (833)
.++|+..+.||+|+||.||+|++. .+..||+|.++.... ....+.|.+|+.++++++|||||++++++..++.
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 80 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCS---DKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNT 80 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCC---HHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCC
Confidence 356788899999999999999853 467899999853211 1224679999999999999999999999999999
Q ss_pred eEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeee
Q 003296 630 AYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKV 709 (833)
Q Consensus 630 ~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~ 709 (833)
.++||||+++|+|.+++... ...++|.+++.++.|++.||+||| +.+++||||||+||+++.++.+|++|||.+..
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~i~~al~~lH---~~~iiH~dikp~nili~~~~~~~l~dfg~~~~ 156 (266)
T cd05064 81 MMIVTEYMSNGALDSFLRKH-EGQLVAGQLMGMLPGLASGMKYLS---EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQE 156 (266)
T ss_pred cEEEEEeCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCEeeccccHhhEEEcCCCcEEECCCccccc
Confidence 99999999999999999753 346899999999999999999999 78999999999999999999999999998765
Q ss_pred eCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccc
Q 003296 710 IDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDF 788 (833)
Q Consensus 710 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (833)
....... ......++..|+|||++.+..++.++|||||||++||+++ |+.||.+.... ...... ......
T Consensus 157 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~-~~~~~~-~~~~~~------ 227 (266)
T cd05064 157 DKSEAIY-TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ-DVIKAV-EDGFRL------ 227 (266)
T ss_pred ccccchh-cccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH-HHHHHH-HCCCCC------
Confidence 4222111 1122345778999999988899999999999999999775 99999754322 111111 110000
Q ss_pred cccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 789 NVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
.. ....+..+.+++.+||+.+|++||+++||.+.|.++
T Consensus 228 ~~------~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 228 PA------PRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred CC------CCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 00 112345678899999999999999999999998764
No 67
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-41 Score=336.71 Aligned_cols=266 Identities=19% Similarity=0.231 Sum_probs=207.6
Q ss_pred HhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecC-----C
Q 003296 555 AVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS-----D 628 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~-----~ 628 (833)
..|...+.||+|+||.|.+|.. .+|..||||++.. ........++-.||+++|+.++|+|||.+++.+..+ .
T Consensus 22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~--~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILN--PFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ceecccccccCcceeeEEEEEEcCCCCEeehhhhhh--hhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 3455568899999999999997 5899999999941 122233467889999999999999999999998762 4
Q ss_pred ceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeee
Q 003296 629 SAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCK 708 (833)
Q Consensus 629 ~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~ 708 (833)
.+|+|+|+|+. ||...++. +..++......++.|+++||.|+| +.+|+|||+||+|++++.+...||+|||+|+
T Consensus 100 DvYiV~elMet-DL~~iik~--~~~L~d~H~q~f~YQiLrgLKyiH---SAnViHRDLKPsNll~n~~c~lKI~DFGLAR 173 (359)
T KOG0660|consen 100 DVYLVFELMET-DLHQIIKS--QQDLTDDHAQYFLYQILRGLKYIH---SANVIHRDLKPSNLLLNADCDLKICDFGLAR 173 (359)
T ss_pred eeEEehhHHhh-HHHHHHHc--CccccHHHHHHHHHHHHHhcchhh---cccccccccchhheeeccCCCEEecccccee
Confidence 58999999955 99999986 345888899999999999999999 8899999999999999999999999999999
Q ss_pred eeCCCCCCCcccccccccccccccccc-CCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccc----ccc
Q 003296 709 VIDPSKSTGSLSTVAGSVGYIPPEYAY-TMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQD----KLD 783 (833)
Q Consensus 709 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~----~~~ 783 (833)
..........++..+.|.+|.|||++. ...|+.+.||||.|||+.||++|++-|.+.+...+.-.....-+. .+.
T Consensus 174 ~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~ 253 (359)
T KOG0660|consen 174 YLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQ 253 (359)
T ss_pred eccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHH
Confidence 886543334557788999999999876 567999999999999999999999999877665543222111111 011
Q ss_pred ccc--------cc--cccCC--chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 784 HIL--------DF--NVSRT--SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 784 ~~~--------~~--~~~~~--~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.+- .. ..++. ........+.+++++.+||..||.+|+|++|+++|
T Consensus 254 ~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 254 KIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 111 00 00000 01112234678999999999999999999999876
No 68
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=4.9e-41 Score=371.16 Aligned_cols=256 Identities=15% Similarity=0.192 Sum_probs=199.2
Q ss_pred hcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
.|+..+.||+|+||+||+|.. .+|+.||||++.. .........+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~-~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~ 80 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRK-KDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEH-HHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEE
Confidence 467788999999999999986 5789999999942 22222233567899999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
|||++|+|.+++.. ...+++..+..++.|++.||+||| ..+|+||||||+|||++.++.+|++|||+++......
T Consensus 81 E~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~aL~~LH---~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~ 155 (381)
T cd05626 81 DYIPGGDMMSLLIR--MEVFPEVLARFYIAELTLAIESVH---KMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTH 155 (381)
T ss_pred ecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccc
Confidence 99999999999976 346889999999999999999999 7899999999999999999999999999976431100
Q ss_pred C---------------------------------------------CCccccccccccccccccccCCcccccCcchhhH
Q 003296 715 S---------------------------------------------TGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFG 749 (833)
Q Consensus 715 ~---------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~G 749 (833)
. .......+||+.|||||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (381)
T cd05626 156 NSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVG 235 (381)
T ss_pred ccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehh
Confidence 0 0001235799999999999888899999999999
Q ss_pred HHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchhHHHHHHHHHHHHHh--ccCCCCCCCCCHHHHHH
Q 003296 750 VILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVA--CVSVSPEARPKMKSVLR 827 (833)
Q Consensus 750 vvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--cl~~dP~~Rps~~evl~ 827 (833)
|++|||+||+.||............. ...... ..+.. .....++.+++.+ |+..+|..||++.|+++
T Consensus 236 ~il~elltG~~Pf~~~~~~~~~~~i~-~~~~~~------~~~~~----~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~ 304 (381)
T cd05626 236 VILFEMLVGQPPFLAPTPTETQLKVI-NWENTL------HIPPQ----VKLSPEAVDLITKLCCSAEERLGRNGADDIKA 304 (381)
T ss_pred hHHHHHHhCCCCCcCCCHHHHHHHHH-cccccc------CCCCC----CCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 99999999999997654322211111 000000 01100 1123467788877 66777777999999987
Q ss_pred H
Q 003296 828 M 828 (833)
Q Consensus 828 ~ 828 (833)
|
T Consensus 305 h 305 (381)
T cd05626 305 H 305 (381)
T ss_pred C
Confidence 5
No 69
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.3e-40 Score=366.89 Aligned_cols=259 Identities=21% Similarity=0.253 Sum_probs=203.3
Q ss_pred HhcCCccccccCcccEEEEEEcC------CCceEEEEEccccchhhhccChhHHHHHHHHHhcCC-CCCcccceEEEecC
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP------SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLS-NSNVMTPLAYVLAS 627 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~ 627 (833)
..|...+.||+|+||.||+|+.. .+..||||+++.... ....+.|.+|++++++++ |||||+++++|...
T Consensus 37 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~ 113 (400)
T cd05105 37 DGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTAR---SSEKQALMSELKIMTHLGPHLNIVNLLGACTKS 113 (400)
T ss_pred cceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCC---hHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC
Confidence 45667789999999999999852 235799999953221 223467999999999996 99999999999999
Q ss_pred CceEEEEeeCCCCChhhhhhcCC---------------------------------------------------------
Q 003296 628 DSAYLFYEYAPKGTLFDVLHGCL--------------------------------------------------------- 650 (833)
Q Consensus 628 ~~~~lv~ey~~~g~L~~~l~~~~--------------------------------------------------------- 650 (833)
+..|+|||||++|+|.++++...
T Consensus 114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (400)
T cd05105 114 GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLE 193 (400)
T ss_pred CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhh
Confidence 99999999999999999886421
Q ss_pred -------------------------------------CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceee
Q 003296 651 -------------------------------------ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFL 693 (833)
Q Consensus 651 -------------------------------------~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill 693 (833)
...++|.++..++.|+++||+||| ..+|+||||||+||++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dikp~Nill 270 (400)
T cd05105 194 IKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLA---SKNCVHRDLAARNVLL 270 (400)
T ss_pred hhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHhEEE
Confidence 124788899999999999999999 7899999999999999
Q ss_pred CCCCCceeccceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHH
Q 003296 694 KSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWV 772 (833)
Q Consensus 694 ~~~~~~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~ 772 (833)
++++.+|++|||+++...............|++.|||||++.+..++.++|||||||++|||++ |..||..........
T Consensus 271 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~ 350 (400)
T cd05105 271 AQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFY 350 (400)
T ss_pred eCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHH
Confidence 9999999999999987643322212233467889999999988889999999999999999997 999987432211111
Q ss_pred HHhhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 773 LRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
......... .. ....+.++.+++.+||+.||++||++.+|.++|+++
T Consensus 351 -~~~~~~~~~------~~------~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l 397 (400)
T cd05105 351 -NKIKSGYRM------AK------PDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESL 397 (400)
T ss_pred -HHHhcCCCC------CC------CccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHH
Confidence 111111000 00 112345788999999999999999999999999864
No 70
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.1e-40 Score=360.69 Aligned_cols=246 Identities=19% Similarity=0.216 Sum_probs=197.8
Q ss_pred cccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEeeCCC
Q 003296 561 NVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPK 639 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey~~~ 639 (833)
+.||+|+||.||+|.. .+|+.||+|++.. ...........+.+|++++++++||||+++++++..++..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~-~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKK-EVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANG 79 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEH-HHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 4689999999999996 4799999999942 2222223346788999999999999999999999999999999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCcc
Q 003296 640 GTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSL 719 (833)
Q Consensus 640 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~~ 719 (833)
|+|.+++.. ...+++.++..++.|++.||+|||+ ..+|+||||||+|||+++++.+||+|||+++....... ..
T Consensus 80 ~~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~--~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~--~~ 153 (325)
T cd05594 80 GELFFHLSR--ERVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TM 153 (325)
T ss_pred CcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc--cc
Confidence 999999875 3468999999999999999999993 26899999999999999999999999999876432221 22
Q ss_pred ccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchhHHH
Q 003296 720 STVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRS 799 (833)
Q Consensus 720 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (833)
....||+.|||||++.+..++.++|||||||++|||+||+.||.+.... ........... .++ ..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~-~~~~~i~~~~~--------~~p------~~ 218 (325)
T cd05594 154 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-KLFELILMEEI--------RFP------RT 218 (325)
T ss_pred ccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH-HHHHHHhcCCC--------CCC------CC
Confidence 3467999999999999889999999999999999999999999754332 11111111100 011 11
Q ss_pred HHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 003296 800 QMLTVLKVAVACVSVSPEARP-----KMKSVLRM 828 (833)
Q Consensus 800 ~~~~~~~l~~~cl~~dP~~Rp-----s~~evl~~ 828 (833)
...++.+++.+||+.||++|+ ++.|+++|
T Consensus 219 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 219 LSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred CCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 234678899999999999996 89999875
No 71
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=8.3e-41 Score=367.10 Aligned_cols=256 Identities=16% Similarity=0.188 Sum_probs=203.5
Q ss_pred HHhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEE
Q 003296 554 EAVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYL 632 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 632 (833)
.++|+..+.||+|+||.||+|+.. +|+.||||++. +.........+.+.+|+++++.++|||||++++++.+++..|+
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~-~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLS-KFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEE-HHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 467888999999999999999974 78999999994 2222222334568899999999999999999999999999999
Q ss_pred EEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCC
Q 003296 633 FYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDP 712 (833)
Q Consensus 633 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~ 712 (833)
|||||++|+|.++++. ..+++..+..++.|++.||+||| +.+|+||||||+|||+++++.+||+|||+++....
T Consensus 121 v~Ey~~gg~L~~~l~~---~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~ 194 (370)
T cd05596 121 VMEYMPGGDLVNLMSN---YDIPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDA 194 (370)
T ss_pred EEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEcCCCCEEEEeccceeeccC
Confidence 9999999999999875 34778888889999999999999 78999999999999999999999999999987643
Q ss_pred CCCCCccccccccccccccccccCC----cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccc
Q 003296 713 SKSTGSLSTVAGSVGYIPPEYAYTM----RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDF 788 (833)
Q Consensus 713 ~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (833)
... ......+||+.|||||++.+. .++.++|||||||++|||++|+.||.+......+... .......
T Consensus 195 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i-~~~~~~~------ 266 (370)
T cd05596 195 NGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI-MDHKNSL------ 266 (370)
T ss_pred CCc-ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHH-HcCCCcC------
Confidence 221 122356799999999988643 3789999999999999999999999865443222211 1110000
Q ss_pred cccCCchhHHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHH
Q 003296 789 NVSRTSLAVRSQMLTVLKVAVACVSVSPEA--RPKMKSVLRM 828 (833)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~--Rps~~evl~~ 828 (833)
..+. ....+.++.+++.+|++.+|++ ||++.|+++|
T Consensus 267 ~~~~----~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 267 TFPD----DIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred CCCC----cCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 0010 1123457789999999999998 9999999875
No 72
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=2.3e-40 Score=356.91 Aligned_cols=245 Identities=22% Similarity=0.255 Sum_probs=197.1
Q ss_pred cccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEecCCceEEEEeeCC
Q 003296 561 NVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVLASDSAYLFYEYAP 638 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~ey~~ 638 (833)
++||+|+||.||+|+.. +|+.||||++. +.........+.+.+|++++.++ +||||+++++++...+..|+||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~-~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~ 79 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLK-KDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVN 79 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEE-HHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCC
Confidence 36899999999999974 78999999994 22222333456788999999877 69999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCc
Q 003296 639 KGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGS 718 (833)
Q Consensus 639 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~ 718 (833)
+|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....... .
T Consensus 80 ~g~L~~~i~~--~~~l~~~~~~~~~~ql~~~L~~lH---~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~--~ 152 (320)
T cd05590 80 GGDLMFHIQK--SRRFDEARARFYAAEITSALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGK--T 152 (320)
T ss_pred CchHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCC--c
Confidence 9999999876 346899999999999999999999 78999999999999999999999999999876432221 2
Q ss_pred cccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchhHH
Q 003296 719 LSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVR 798 (833)
Q Consensus 719 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (833)
.....||+.|||||++.+..++.++|||||||++|||++|+.||....... .......... ..+ .
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~-~~~~i~~~~~--------~~~------~ 217 (320)
T cd05590 153 TSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDD-LFEAILNDEV--------VYP------T 217 (320)
T ss_pred ccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH-HHHHHhcCCC--------CCC------C
Confidence 245679999999999998889999999999999999999999997544322 2111111100 000 0
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCH------HHHHHH
Q 003296 799 SQMLTVLKVAVACVSVSPEARPKM------KSVLRM 828 (833)
Q Consensus 799 ~~~~~~~~l~~~cl~~dP~~Rps~------~evl~~ 828 (833)
....++.+++.+|++.||++||++ +++++|
T Consensus 218 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h 253 (320)
T cd05590 218 WLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRH 253 (320)
T ss_pred CCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcC
Confidence 123467899999999999999998 666654
No 73
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-40 Score=356.05 Aligned_cols=256 Identities=21% Similarity=0.227 Sum_probs=215.0
Q ss_pred HHHHhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCC-CCCcccceEEEecCCc
Q 003296 552 AMEAVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLS-NSNVMTPLAYVLASDS 629 (833)
Q Consensus 552 ~~~~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~~ 629 (833)
.....|+..+.+|+|.||.||+|+.+ +|+.+|+|.+.++ ..........+.+|+++|+++. |||||.++++|++.+.
T Consensus 32 ~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~-~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~ 110 (382)
T KOG0032|consen 32 DIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKR-KLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDS 110 (382)
T ss_pred cccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehh-hccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCe
Confidence 44566788899999999999999986 5999999999533 3222234578999999999998 9999999999999999
Q ss_pred eEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCC----CCceeccce
Q 003296 630 AYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSL----KEPQIGDIE 705 (833)
Q Consensus 630 ~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~----~~~ki~dfg 705 (833)
+++|||+|.||.|++.+... .+++..+..++.|++.|+.||| ..+|+|||+||+|+|+... +.+|++|||
T Consensus 111 ~~lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH---~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFG 184 (382)
T KOG0032|consen 111 VYLVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLH---SLGVVHRDLKPENLLLASKDEGSGRIKLIDFG 184 (382)
T ss_pred EEEEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHH---hCCceeccCCHHHeeeccccCCCCcEEEeeCC
Confidence 99999999999999999864 3899999999999999999999 7899999999999999643 479999999
Q ss_pred eeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccccc
Q 003296 706 LCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHI 785 (833)
Q Consensus 706 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 785 (833)
+++..... ......+||++|+|||++....|+.++||||.||++|.|++|.+||.+............
T Consensus 185 la~~~~~~---~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~--------- 252 (382)
T KOG0032|consen 185 LAKFIKPG---ERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILR--------- 252 (382)
T ss_pred CceEccCC---ceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHc---------
Confidence 99988652 245778999999999999999999999999999999999999999987664433332111
Q ss_pred ccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 786 LDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.........+...+..+.+++.+|+..||.+|+|+.++++|
T Consensus 253 --~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 253 --GDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred --CCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 11112222344567788899999999999999999999986
No 74
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-41 Score=367.41 Aligned_cols=254 Identities=19% Similarity=0.294 Sum_probs=209.3
Q ss_pred cCCccccccCcccEEEEEEcC----CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEE
Q 003296 557 ANPLNVELKTRFSTYYKAVMP----SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYL 632 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 632 (833)
-.+.++||.|-||.||+|.++ ....||||.++... .++.+.+|..|+.||.+++||||+++.|+.......+|
T Consensus 631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy---tekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMI 707 (996)
T KOG0196|consen 631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY---TEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMI 707 (996)
T ss_pred eEEEEEEecccccceecccccCCCCcceeEEEeeeccCc---cHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEE
Confidence 356799999999999999985 34689999995322 23456899999999999999999999999999999999
Q ss_pred EEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCC
Q 003296 633 FYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDP 712 (833)
Q Consensus 633 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~ 712 (833)
|.|||+||+|+.+|+... +.++|.+...+.++||.|+.||- .++.|||||...|||++.+..+||+|||+++.+.+
T Consensus 708 iTEyMENGsLDsFLR~~D-GqftviQLVgMLrGIAsGMkYLs---dm~YVHRDLAARNILVNsnLvCKVsDFGLSRvled 783 (996)
T KOG0196|consen 708 ITEYMENGSLDSFLRQND-GQFTVIQLVGMLRGIASGMKYLS---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 783 (996)
T ss_pred EhhhhhCCcHHHHHhhcC-CceEeehHHHHHHHHHHHhHHHh---hcCchhhhhhhhheeeccceEEEeccccceeeccc
Confidence 999999999999999764 45999999999999999999999 88999999999999999999999999999998854
Q ss_pred CCCCCccccccc--cccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhccccccccccccc
Q 003296 713 SKSTGSLSTVAG--SVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFN 789 (833)
Q Consensus 713 ~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (833)
+... ..++..| ..+|.|||.+...+++.++||||||||+||.++ |.+||.+...- -+.....++.++
T Consensus 784 d~~~-~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQ--dVIkaIe~gyRL------- 853 (996)
T KOG0196|consen 784 DPEA-AYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--DVIKAIEQGYRL------- 853 (996)
T ss_pred CCCc-cccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchH--HHHHHHHhccCC-------
Confidence 4322 2222223 468999999999999999999999999999775 99999754331 122222222221
Q ss_pred ccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 790 VSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 790 ~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
+ .+.+++..+-+|++.||++|-.+||++.||+.+|.++
T Consensus 854 -P----pPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDkl 891 (996)
T KOG0196|consen 854 -P----PPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKL 891 (996)
T ss_pred -C----CCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHH
Confidence 1 1235677888999999999999999999999998763
No 75
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=5e-40 Score=344.25 Aligned_cols=256 Identities=18% Similarity=0.267 Sum_probs=208.1
Q ss_pred HHhcCCccccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 554 EAVANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
.++|+..+.||+|+||.||+|...+++.||+|++.... ...+.|.+|+.++++++||||+++++++...+..++|
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 79 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-----MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYII 79 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-----hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEE
Confidence 35688889999999999999998888999999984221 1246899999999999999999999999999999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
|||+++|+|.++++......+++.++..++.|+++||+||| ..+++||||||+||++++++.+|++|||+++.....
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05072 80 TEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDN 156 (261)
T ss_pred EecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEecCCCcEEECCCccceecCCC
Confidence 99999999999998654557899999999999999999999 788999999999999999999999999999876432
Q ss_pred CCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccccccC
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSR 792 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 792 (833)
... ......++..|+|||++.+..++.++|||||||++|||+| |+.||.+..... ..... ...... ..
T Consensus 157 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~-~~~~~-~~~~~~--------~~ 225 (261)
T cd05072 157 EYT-AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD-VMSAL-QRGYRM--------PR 225 (261)
T ss_pred cee-ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH-HHHHH-HcCCCC--------CC
Confidence 211 1123456778999999988889999999999999999999 999997533211 11111 110000 00
Q ss_pred CchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 793 TSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 793 ~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
....+.++.+++.+|++.+|++||+++++.+.|+++
T Consensus 226 ----~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 226 ----MENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred ----CCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 012234678999999999999999999999999863
No 76
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=2.8e-40 Score=356.69 Aligned_cols=245 Identities=20% Similarity=0.231 Sum_probs=197.5
Q ss_pred cccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEecCCceEEEEeeCC
Q 003296 561 NVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVLASDSAYLFYEYAP 638 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~ey~~ 638 (833)
++||+|+||.||+|+.. +|+.||||++. ..........+.+..|++++..+ +||||+++++++..++..|+||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~-~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~ 79 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLK-KDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVN 79 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEe-HHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCC
Confidence 46999999999999974 68999999994 22222233456788999999876 79999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCc
Q 003296 639 KGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGS 718 (833)
Q Consensus 639 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~ 718 (833)
+|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++....... .
T Consensus 80 ~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~--~ 152 (321)
T cd05591 80 GGDLMFQIQR--SRKFDEPRSRFYAAEVTLALMFLH---RHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGV--T 152 (321)
T ss_pred CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeecccceecccCCc--c
Confidence 9999999875 346899999999999999999999 78999999999999999999999999999876432221 2
Q ss_pred cccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchhHH
Q 003296 719 LSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVR 798 (833)
Q Consensus 719 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (833)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ........... .+ .
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~-~~~~i~~~~~~--------~p------~ 217 (321)
T cd05591 153 TTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD-LFESILHDDVL--------YP------V 217 (321)
T ss_pred ccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHH-HHHHHHcCCCC--------CC------C
Confidence 245679999999999998889999999999999999999999997554322 22111111000 00 0
Q ss_pred HHHHHHHHHHHhccCCCCCCCC-------CHHHHHHH
Q 003296 799 SQMLTVLKVAVACVSVSPEARP-------KMKSVLRM 828 (833)
Q Consensus 799 ~~~~~~~~l~~~cl~~dP~~Rp-------s~~evl~~ 828 (833)
....++.+++.+|++.||++|| ++++++++
T Consensus 218 ~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 218 WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 1234678999999999999999 88888765
No 77
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=2.2e-40 Score=351.35 Aligned_cols=253 Identities=21% Similarity=0.234 Sum_probs=203.1
Q ss_pred hcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
+|+..+.||+|+||.||++.. .+++.||||++... ..........+.+|++++++++|||||++++++..++..++||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKK-RIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehh-hhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEE
Confidence 366778999999999999997 47899999999422 2222223456889999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
||+++|+|.+++.......+++..+..++.|++.|+.||| +.+|+||||||+||++++++.++++|||+++......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05605 80 TLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLH---RERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE 156 (285)
T ss_pred eccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC
Confidence 9999999999887544456899999999999999999999 7889999999999999999999999999998764322
Q ss_pred CCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHH--HHHhhcccccccccccccccC
Q 003296 715 STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKW--VLRNSAQQDKLDHILDFNVSR 792 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 792 (833)
. .....||+.|||||++.+..++.++||||+||++|||++|+.||.+......+ +...... . . ..
T Consensus 157 ~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~-~--~----~~--- 223 (285)
T cd05605 157 T---IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKE-D--Q----EE--- 223 (285)
T ss_pred c---cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhh-c--c----cc---
Confidence 1 13457999999999998888999999999999999999999999754332111 1110000 0 0 00
Q ss_pred CchhHHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 003296 793 TSLAVRSQMLTVLKVAVACVSVSPEARP-----KMKSVLRM 828 (833)
Q Consensus 793 ~~~~~~~~~~~~~~l~~~cl~~dP~~Rp-----s~~evl~~ 828 (833)
.....+..+.+++.+||+.||++|| +++|++++
T Consensus 224 ---~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 224 ---YSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred ---cCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 0112345678999999999999999 88898765
No 78
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.6e-40 Score=351.57 Aligned_cols=249 Identities=18% Similarity=0.193 Sum_probs=197.2
Q ss_pred cccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEeeCCCCC
Q 003296 563 ELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGT 641 (833)
Q Consensus 563 ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey~~~g~ 641 (833)
||+|+||+||+|... +|+.||||++... ........+.+..|++++++++||||+++.+++..++..|+|||||++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~-~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~ 79 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKK-RLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGD 79 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHH-HHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCC
Confidence 699999999999974 7899999999422 22222234678899999999999999999999999999999999999999
Q ss_pred hhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCcc
Q 003296 642 LFDVLHGC--LENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSL 719 (833)
Q Consensus 642 L~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~~ 719 (833)
|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+|++|||+++....... ..
T Consensus 80 L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~--~~ 154 (280)
T cd05608 80 LRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLH---QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS--KT 154 (280)
T ss_pred HHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc--cc
Confidence 99887542 2346899999999999999999999 78999999999999999999999999999987643322 22
Q ss_pred ccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchhHHH
Q 003296 720 STVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRS 799 (833)
Q Consensus 720 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (833)
....||+.|+|||++.+..++.++|||||||++|||++|+.||............. ..+...... ....
T Consensus 155 ~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~-------~~~~~~~~~----~~~~ 223 (280)
T cd05608 155 KGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK-------QRILNDSVT----YPDK 223 (280)
T ss_pred cccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHH-------HhhcccCCC----Cccc
Confidence 34679999999999999999999999999999999999999997543221111000 000000000 0112
Q ss_pred HHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 003296 800 QMLTVLKVAVACVSVSPEARP-----KMKSVLRM 828 (833)
Q Consensus 800 ~~~~~~~l~~~cl~~dP~~Rp-----s~~evl~~ 828 (833)
.+.++.+++.+||+.||++|| +++|+++|
T Consensus 224 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 224 FSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred CCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 345678999999999999999 77888765
No 79
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=9.7e-41 Score=366.47 Aligned_cols=256 Identities=15% Similarity=0.188 Sum_probs=197.5
Q ss_pred hcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
+|+..+.||+|+||+||+|.. .+|+.||||++... ..........+.+|++++.+++|||||++++++.+.+..|+||
T Consensus 2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKA-DMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHH-HHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 577889999999999999986 47899999999422 2222233467889999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
|||++|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 81 E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH---~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~ 155 (363)
T cd05628 81 EFLPGGDMMTLLMK--KDTLTEEETQFYIAETVLAIDSIH---QLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAH 155 (363)
T ss_pred cCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCCEEEeeccCcccccccc
Confidence 99999999999976 356899999999999999999999 7899999999999999999999999999987543211
Q ss_pred CC---------------------------------CccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCc
Q 003296 715 ST---------------------------------GSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTA 761 (833)
Q Consensus 715 ~~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p 761 (833)
.. ......+||+.|||||++.+..++.++|||||||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~P 235 (363)
T cd05628 156 RTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (363)
T ss_pred cccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCC
Confidence 00 011245899999999999988999999999999999999999999
Q ss_pred ccCCccHHHHHHHhhcccccccccccccccCCchhHHHHHHHHHHHHHhccC--CCCCCCCCHHHHHHH
Q 003296 762 VNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVS--VSPEARPKMKSVLRM 828 (833)
Q Consensus 762 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~--~dP~~Rps~~evl~~ 828 (833)
|.+......+.... ..... . .++... ....++.+++.+++. .++..||+++||++|
T Consensus 236 f~~~~~~~~~~~i~-~~~~~---~---~~p~~~----~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 236 FCSETPQETYKKVM-NWKET---L---IFPPEV----PISEKAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CCCCCHHHHHHHHH-cCcCc---c---cCCCcC----CCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 97654332222111 10000 0 011000 122355666666433 334456999999876
No 80
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=6.3e-41 Score=368.81 Aligned_cols=255 Identities=17% Similarity=0.222 Sum_probs=201.3
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
+|+..+.||+|+||.||+|+.. +|+.||||++... ........+.+.+|++++++++|||||+++++|.+++..|+||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKS-EMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHH-HhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 5778899999999999999974 7899999999422 2222233467889999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
|||++|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+|++|||+++......
T Consensus 81 E~~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 155 (364)
T cd05599 81 EYLPGGDMMTLLMK--KDTFTEEETRFYIAETILAIDSIH---KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSH 155 (364)
T ss_pred CCCCCcHHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEeecccceeccccc
Confidence 99999999999976 346899999999999999999999 7899999999999999999999999999987653211
Q ss_pred CC------------------------------------CccccccccccccccccccCCcccccCcchhhHHHHHHHHhC
Q 003296 715 ST------------------------------------GSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG 758 (833)
Q Consensus 715 ~~------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg 758 (833)
.. ......+||+.|||||++.+..++.++|||||||++|||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G 235 (364)
T cd05599 156 RTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235 (364)
T ss_pred cccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcC
Confidence 00 001135799999999999988899999999999999999999
Q ss_pred CCcccCCccHHHHHHHhhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCC---HHHHHHH
Q 003296 759 KTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPK---MKSVLRM 828 (833)
Q Consensus 759 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps---~~evl~~ 828 (833)
+.||........ ........... ..+.. .....++.+++.+|+. +|.+|++ ++|+++|
T Consensus 236 ~~Pf~~~~~~~~-~~~i~~~~~~~------~~~~~----~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 236 YPPFCSDNPQET-YRKIINWKETL------QFPDE----VPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred CCCCCCCCHHHH-HHHHHcCCCcc------CCCCC----CCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 999975543221 11111110000 00000 0123467788999996 9999998 9998774
No 81
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=2.8e-40 Score=358.28 Aligned_cols=259 Identities=20% Similarity=0.251 Sum_probs=202.2
Q ss_pred HhcCCccccccCcccEEEEEEcC------CCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEecC
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP------SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVLAS 627 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~ 627 (833)
+.|+..+.||+|+||.||+|... +++.||+|+++.... ....+.+.+|++++.++ +|||||+++++|...
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~ 83 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT---ASEYKALMTELKILIHIGHHLNVVNLLGACTKP 83 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCC---HHHHHHHHHHHHHHHhhccCcchhheeeeEecC
Confidence 45778899999999999999742 357899999842211 12245688999999999 899999999998754
Q ss_pred -CceEEEEeeCCCCChhhhhhcCCC-------------------------------------------------------
Q 003296 628 -DSAYLFYEYAPKGTLFDVLHGCLE------------------------------------------------------- 651 (833)
Q Consensus 628 -~~~~lv~ey~~~g~L~~~l~~~~~------------------------------------------------------- 651 (833)
...++||||+++|+|.+++.....
T Consensus 84 ~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (337)
T cd05054 84 GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGD 163 (337)
T ss_pred CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhh
Confidence 568899999999999999864211
Q ss_pred ----CCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCcccccccccc
Q 003296 652 ----NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVG 727 (833)
Q Consensus 652 ----~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~~~~~~gt~~ 727 (833)
..++|..+..++.|++.||+||| ..+|+||||||+||++++++.+|++|||+++.+.............++..
T Consensus 164 ~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~ 240 (337)
T cd05054 164 ELYKEPLTLEDLISYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLK 240 (337)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcc
Confidence 25899999999999999999999 78999999999999999999999999999987643322222234556788
Q ss_pred ccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccccccCCchhHHHHHHHHHH
Q 003296 728 YIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLK 806 (833)
Q Consensus 728 y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 (833)
|||||++.+..++.++|||||||++|||++ |+.||.+.......... ....... . . ......++.+
T Consensus 241 y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~-~~~~~~~--~----~------~~~~~~~~~~ 307 (337)
T cd05054 241 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRR-LKEGTRM--R----A------PEYATPEIYS 307 (337)
T ss_pred ccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHH-HhccCCC--C----C------CccCCHHHHH
Confidence 999999999999999999999999999998 99999753321111111 1110000 0 0 0122356789
Q ss_pred HHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 807 VAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 807 l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
++.+||+.+|++||++.||+++|+++
T Consensus 308 l~~~cl~~~p~~RPs~~ell~~l~~~ 333 (337)
T cd05054 308 IMLDCWHNNPEDRPTFSELVEILGDL 333 (337)
T ss_pred HHHHHccCChhhCcCHHHHHHHHHHH
Confidence 99999999999999999999999875
No 82
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=7.4e-40 Score=343.35 Aligned_cols=255 Identities=16% Similarity=0.247 Sum_probs=206.8
Q ss_pred HhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
.+|...+.||+|+||.||+|... +++.||+|++... ....++|.+|++++++++||||++++++|..++..++|
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 80 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-----chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEE
Confidence 35777889999999999999974 6899999998422 12346799999999999999999999999999999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
|||+++|+|.+++.......++|..++.++.|+++||+||| ..+++||||||+||++++++.+|++|||+++.....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~ 157 (263)
T cd05052 81 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 157 (263)
T ss_pred EEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCcEEeCCCccccccccc
Confidence 99999999999997654556899999999999999999999 789999999999999999999999999999876432
Q ss_pred CCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccccccC
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSR 792 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 792 (833)
... ......++..|+|||++.+..++.++|||||||++|||++ |..||.+... .+........ . .....
T Consensus 158 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~-~~~~~~~~~~-~------~~~~~- 227 (263)
T cd05052 158 TYT-AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQVYELLEKG-Y------RMERP- 227 (263)
T ss_pred eee-ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHHHCC-C------CCCCC-
Confidence 211 1122345678999999988889999999999999999998 9999975432 2222111110 0 00110
Q ss_pred CchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 793 TSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 793 ~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
...+.++.+++.+||+.||++||++.|++++|+++
T Consensus 228 -----~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 228 -----EGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred -----CCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 12345788999999999999999999999999875
No 83
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.8e-40 Score=357.74 Aligned_cols=257 Identities=20% Similarity=0.301 Sum_probs=201.9
Q ss_pred HHhcCCccccccCcccEEEEEEcC-CCc----eEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCC
Q 003296 554 EAVANPLNVELKTRFSTYYKAVMP-SGM----SYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD 628 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~ 628 (833)
..+|+..+.||+|+||.||+|++. +|. .||||+++... .....++|.+|+.++++++|||||+++|+|...
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~- 81 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNPHVCRLLGICLTS- 81 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-
Confidence 356888999999999999999863 444 48999984221 122346799999999999999999999999864
Q ss_pred ceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeee
Q 003296 629 SAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCK 708 (833)
Q Consensus 629 ~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~ 708 (833)
..++|+||+++|+|.++++.. ...+++..++.++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++
T Consensus 82 ~~~~v~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~LH---~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~ 157 (316)
T cd05108 82 TVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLE---ERRLVHRDLAARNVLVKTPQHVKITDFGLAK 157 (316)
T ss_pred CceeeeecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEecCCCcEEEccccccc
Confidence 578999999999999999864 345899999999999999999999 7899999999999999999999999999998
Q ss_pred eeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhccccccccccc
Q 003296 709 VIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILD 787 (833)
Q Consensus 709 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (833)
...............++..|||||++.+..++.++|||||||++|||++ |+.||.+... .++... .......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~-~~~~~~-~~~~~~~----- 230 (316)
T cd05108 158 LLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEISSI-LEKGERL----- 230 (316)
T ss_pred cccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH-HHHHHH-HhCCCCC-----
Confidence 7654332211223345678999999998899999999999999999998 9999975332 121111 1111110
Q ss_pred ccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 788 FNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
... .....++.+++.+||+.||++||++.|++.++..+
T Consensus 231 ---~~~----~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~ 268 (316)
T cd05108 231 ---PQP----PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 268 (316)
T ss_pred ---CCC----CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 000 11234678899999999999999999999998754
No 84
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=4.2e-40 Score=355.81 Aligned_cols=248 Identities=22% Similarity=0.257 Sum_probs=196.4
Q ss_pred cCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHH---hcCCCCCcccceEEEecCCceEE
Q 003296 557 ANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVL---GKLSNSNVMTPLAYVLASDSAYL 632 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l---~~l~H~niv~~~~~~~~~~~~~l 632 (833)
|+..+.||+|+||.||+|.. .+|+.||||+++.. ........+.+.+|++++ ++++||||+++++++...+..|+
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~l 79 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKG-DIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCF 79 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHH-HhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEE
Confidence 45678999999999999996 47899999999522 212223345677776665 57789999999999999999999
Q ss_pred EEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCC
Q 003296 633 FYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDP 712 (833)
Q Consensus 633 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~ 712 (833)
||||+++|+|..++++ ..+++..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++....
T Consensus 80 v~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05589 80 VMEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLH---ENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMG 153 (324)
T ss_pred EEcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCcEEeCcccCCccCCC
Confidence 9999999999998864 46899999999999999999999 78999999999999999999999999999875432
Q ss_pred CCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccC
Q 003296 713 SKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSR 792 (833)
Q Consensus 713 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 792 (833)
... .....+||+.|||||++.+..++.++|||||||++|||++|+.||.+.... +........... .+
T Consensus 154 ~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~-~~~~~i~~~~~~--------~p- 221 (324)
T cd05589 154 FGD--RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE-EVFDSIVNDEVR--------YP- 221 (324)
T ss_pred CCC--cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhCCCC--------CC-
Confidence 221 224578999999999999888999999999999999999999999754332 222111111000 00
Q ss_pred CchhHHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 003296 793 TSLAVRSQMLTVLKVAVACVSVSPEARP-----KMKSVLRM 828 (833)
Q Consensus 793 ~~~~~~~~~~~~~~l~~~cl~~dP~~Rp-----s~~evl~~ 828 (833)
......+.+++.+||+.||++|| ++.|++++
T Consensus 222 -----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 222 -----RFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred -----CCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 11234677899999999999999 56776654
No 85
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=8.5e-40 Score=341.45 Aligned_cols=251 Identities=22% Similarity=0.301 Sum_probs=202.8
Q ss_pred HhcCCccccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
++|+..+.||+|+||.||+|...++..+|+|.+... ....+.|.+|++++++++||||++++++|..++..++||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~ 78 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG-----AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVT 78 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccC-----CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEE
Confidence 357778899999999999999888889999998422 123467999999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
||+++|+|.++++... ..++|..+..++.|++.||+||| ..+|+||||||+||++++++.+|++|||.++......
T Consensus 79 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05114 79 EFMENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLE---RNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDE 154 (256)
T ss_pred EcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcceEEEcCCCeEEECCCCCccccCCCc
Confidence 9999999999997532 35899999999999999999999 7889999999999999999999999999987653222
Q ss_pred CCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccccccCC
Q 003296 715 STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRT 793 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (833)
.. ......++..|+|||++.+..++.++|||||||++|||++ |+.||...... +.+...... .. ...+.
T Consensus 155 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~-~~~~~i~~~-~~---~~~~~---- 224 (256)
T cd05114 155 YT-SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY-EVVEMISRG-FR---LYRPK---- 224 (256)
T ss_pred ee-ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHHCC-CC---CCCCC----
Confidence 11 1123345678999999988889999999999999999999 89999754332 111111111 11 00010
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 003296 794 SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRML 829 (833)
Q Consensus 794 ~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L 829 (833)
..+.++.+++.+||+.+|++||+++|+++.|
T Consensus 225 -----~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 225 -----LASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred -----CCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 1234678999999999999999999999886
No 86
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.5e-40 Score=374.90 Aligned_cols=252 Identities=19% Similarity=0.170 Sum_probs=202.1
Q ss_pred hcCCccccccCcccEEEEEEcC-C-CceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-S-GMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~-~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
.|...+.+|+|+||.||+|... + +..||+|++.... ......+.+|++++++++|||||+++++|..++..|+|
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~----~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv 143 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND----ERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLI 143 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC----HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEE
Confidence 3777899999999999999864 4 6788998873221 12235678899999999999999999999999999999
Q ss_pred EeeCCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeC
Q 003296 634 YEYAPKGTLFDVLHGC--LENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~ 711 (833)
|||+++|+|.++++.. ....+++.++..++.|++.||+|+| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 144 ~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~ 220 (478)
T PTZ00267 144 MEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVH---SRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYS 220 (478)
T ss_pred EECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCcCHHhEEECCCCcEEEEeCcCceecC
Confidence 9999999999988642 2346889999999999999999999 7899999999999999999999999999998765
Q ss_pred CCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccccccccccc
Q 003296 712 PSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVS 791 (833)
Q Consensus 712 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (833)
...........+||++|||||++.+..++.++|||||||++|||++|+.||...... +........ . . ++ .
T Consensus 221 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~-~~~~~~~~~-~-~----~~-~- 291 (478)
T PTZ00267 221 DSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQR-EIMQQVLYG-K-Y----DP-F- 291 (478)
T ss_pred CccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhC-C-C----CC-C-
Confidence 433222234567999999999999889999999999999999999999999754322 211111110 0 0 00 0
Q ss_pred CCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 792 RTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 792 ~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
....+.++.+++.+||+.||++||+++|++.+
T Consensus 292 -----~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 292 -----PCPVSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred -----CccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 01223467899999999999999999999764
No 87
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=2.3e-40 Score=358.34 Aligned_cols=247 Identities=15% Similarity=0.229 Sum_probs=196.6
Q ss_pred cccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEecCCceEEEEeeCC
Q 003296 561 NVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVLASDSAYLFYEYAP 638 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~ey~~ 638 (833)
++||+|+||.||+|... +++.||||+++. .........+.+.+|+.++.++ +|||||+++++|..++..|+|||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~-~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~ 79 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKK-ELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVS 79 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEH-HHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCC
Confidence 46899999999999974 789999999942 2222223346788999999998 69999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCc
Q 003296 639 KGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGS 718 (833)
Q Consensus 639 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~ 718 (833)
+|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 80 ~g~L~~~~~~--~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~--~~ 152 (329)
T cd05588 80 GGDLMFHMQR--QRKLPEEHARFYSAEISLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG--DT 152 (329)
T ss_pred CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEECcCccccccccCC--Cc
Confidence 9999998875 356999999999999999999999 7899999999999999999999999999987532211 12
Q ss_pred cccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCc-------cHHHHHHHhhccccccccccccccc
Q 003296 719 LSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGN-------ELAKWVLRNSAQQDKLDHILDFNVS 791 (833)
Q Consensus 719 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (833)
....+||+.|+|||++.+..++.++|||||||++|||+||+.||+... ....+....... ....
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~---------~~~~ 223 (329)
T cd05588 153 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILE---------KQIR 223 (329)
T ss_pred cccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHc---------CCCC
Confidence 245689999999999999899999999999999999999999996211 111222111111 0000
Q ss_pred CCchhHHHHHHHHHHHHHhccCCCCCCCCC------HHHHHHH
Q 003296 792 RTSLAVRSQMLTVLKVAVACVSVSPEARPK------MKSVLRM 828 (833)
Q Consensus 792 ~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps------~~evl~~ 828 (833)
.+ ...+.++.+++.+|++.||++||+ ++|+++|
T Consensus 224 ~p----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 224 IP----RSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred CC----CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 00 122346789999999999999997 6787754
No 88
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=5.3e-41 Score=350.74 Aligned_cols=250 Identities=27% Similarity=0.405 Sum_probs=194.2
Q ss_pred ccccccCcccEEEEEEcC-----CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 560 LNVELKTRFSTYYKAVMP-----SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 560 ~~~ig~g~~g~vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
.+.||.|+||.||+|.+. .+..|+||.++.... ....+.|.+|++.+++++||||++++|+|...+..++||
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~ 80 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSS---EEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVM 80 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSS---HHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEE
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccc---cccceeeeecccccccccccccccccccccccccccccc
Confidence 468999999999999975 367899999943211 122578999999999999999999999999888899999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
|||++|+|.++++......++|.++..|+.|+|+||+||| +.+++|+||+++||++++++.+||+|||+++......
T Consensus 81 e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh---~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~ 157 (259)
T PF07714_consen 81 EYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLH---SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKS 157 (259)
T ss_dssp E--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHH---HTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSS
T ss_pred cccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999864567999999999999999999999 7789999999999999999999999999998763222
Q ss_pred CCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccccccCC
Q 003296 715 STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRT 793 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (833)
.........+...|+|||++.+..++.++||||||+++||+++ |+.||.+. ...++.... .+..... ..
T Consensus 158 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~-~~~~~~~~~-~~~~~~~------~~-- 227 (259)
T PF07714_consen 158 KYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY-DNEEIIEKL-KQGQRLP------IP-- 227 (259)
T ss_dssp SEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS-CHHHHHHHH-HTTEETT------SB--
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccc-cccccce------ec--
Confidence 2112233457789999999998889999999999999999999 78888654 223322222 1111110 00
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 003296 794 SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRML 829 (833)
Q Consensus 794 ~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L 829 (833)
...+..+.+++.+||+.||++|||++|+++.|
T Consensus 228 ----~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 228 ----DNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ----TTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ----cchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 11234677899999999999999999999876
No 89
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=5.3e-40 Score=353.39 Aligned_cols=244 Identities=21% Similarity=0.254 Sum_probs=193.7
Q ss_pred cccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEecCCceEEEEeeCC
Q 003296 561 NVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVLASDSAYLFYEYAP 638 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~ey~~ 638 (833)
++||+|+||.||+|.. .+++.||||+++. .........+.+..|.+++... +||||+++++++..++..|+||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~-~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~ 79 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKK-DVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLN 79 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEH-HHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCC
Confidence 3699999999999997 4688999999942 2222233445667788887754 89999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCc
Q 003296 639 KGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGS 718 (833)
Q Consensus 639 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~ 718 (833)
+|+|.+++.. ...+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 80 gg~L~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~--~~ 152 (316)
T cd05592 80 GGDLMFHIQS--SGRFDEARARFYAAEIICGLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE--GK 152 (316)
T ss_pred CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC--Cc
Confidence 9999999976 346899999999999999999999 7899999999999999999999999999998653222 12
Q ss_pred cccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchhHH
Q 003296 719 LSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVR 798 (833)
Q Consensus 719 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (833)
....+||+.|||||++.+..++.++|||||||++|||++|+.||.+.... +.......... ..+ .
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~-~~~~~i~~~~~--------~~~------~ 217 (316)
T cd05592 153 ASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED-ELFDSILNDRP--------HFP------R 217 (316)
T ss_pred cccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHcCCC--------CCC------C
Confidence 24568999999999999888999999999999999999999999754432 22111111100 011 1
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHH-HHHH
Q 003296 799 SQMLTVLKVAVACVSVSPEARPKMK-SVLR 827 (833)
Q Consensus 799 ~~~~~~~~l~~~cl~~dP~~Rps~~-evl~ 827 (833)
....++.+++.+||+.||++||++. ++++
T Consensus 218 ~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05592 218 WISKEAKDCLSKLFERDPTKRLGVDGDIRQ 247 (316)
T ss_pred CCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 1234677899999999999999875 5544
No 90
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=6.4e-40 Score=346.28 Aligned_cols=247 Identities=18% Similarity=0.213 Sum_probs=196.6
Q ss_pred cccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEeeCCCCC
Q 003296 563 ELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGT 641 (833)
Q Consensus 563 ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey~~~g~ 641 (833)
||+|+||.||++.. .+|+.||+|++.. .........+.+..|++++++++||||+++++++..+...|+||||+++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~-~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~ 79 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDK-KRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGD 79 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcH-HHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCC
Confidence 69999999999997 4799999999942 222222234556789999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCcccc
Q 003296 642 LFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLST 721 (833)
Q Consensus 642 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~~~~ 721 (833)
|.+++.......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++....... ....
T Consensus 80 L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~---~~~~ 153 (277)
T cd05607 80 LKYHIYNVGERGLEMERVIHYSAQITCGILHLH---SMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK---TITQ 153 (277)
T ss_pred HHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc---eeec
Confidence 999887654556899999999999999999999 7899999999999999999999999999998764322 1234
Q ss_pred ccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHH---HHHHHhhcccccccccccccccCCchhHH
Q 003296 722 VAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELA---KWVLRNSAQQDKLDHILDFNVSRTSLAVR 798 (833)
Q Consensus 722 ~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (833)
..||+.|+|||++.+..++.++||||+||++|||++|+.||....... ...... ........ ..
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~----------~~~~~~~~---~~ 220 (277)
T cd05607 154 RAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRT----------LEDEVKFE---HQ 220 (277)
T ss_pred cCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHh----------hccccccc---cc
Confidence 579999999999988889999999999999999999999997533211 111111 00011000 01
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 003296 799 SQMLTVLKVAVACVSVSPEARPKMKSVLRML 829 (833)
Q Consensus 799 ~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L 829 (833)
....++.+++.+||+.||++||+++|+++..
T Consensus 221 ~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 221 NFTEESKDICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred cCCHHHHHHHHHHhccCHhhCCCCccchhhh
Confidence 2345678999999999999999997766443
No 91
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2.1e-40 Score=361.21 Aligned_cols=264 Identities=19% Similarity=0.214 Sum_probs=197.1
Q ss_pred cCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCC-----ce
Q 003296 557 ANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD-----SA 630 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~-----~~ 630 (833)
|+..+.||+|+||.||+|+. .+|..||||++.... ........+.+|++++++++|||||++++++...+ ..
T Consensus 2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 79 (338)
T cd07859 2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVF--EHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI 79 (338)
T ss_pred eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhh--ccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence 56778999999999999996 479999999984211 11223457899999999999999999999986532 47
Q ss_pred EEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeee
Q 003296 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVI 710 (833)
Q Consensus 631 ~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~ 710 (833)
|+|||||. ++|.+++.. ...+++..+..++.|+++||+||| +.+|+||||||+|||++.++.+||+|||+++..
T Consensus 80 ~lv~e~~~-~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~ 153 (338)
T cd07859 80 YVVFELME-SDLHQVIKA--NDDLTPEHHQFFLYQLLRALKYIH---TANVFHRDLKPKNILANADCKLKICDFGLARVA 153 (338)
T ss_pred EEEEecCC-CCHHHHHHh--cccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEccCcccccc
Confidence 99999995 699999875 346899999999999999999999 789999999999999999999999999999865
Q ss_pred CCCCC-CCccccccccccccccccccC--CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccc-----
Q 003296 711 DPSKS-TGSLSTVAGSVGYIPPEYAYT--MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKL----- 782 (833)
Q Consensus 711 ~~~~~-~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~----- 782 (833)
..... ........||+.|+|||++.+ ..++.++|||||||++|||+||+.||.+..............+...
T Consensus 154 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (338)
T cd07859 154 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETIS 233 (338)
T ss_pred ccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence 32221 111234679999999999865 5789999999999999999999999975543221110000000000
Q ss_pred -------cccc---cccccCC-chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 783 -------DHIL---DFNVSRT-SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 783 -------~~~~---~~~~~~~-~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
...+ ....... ..........+.+++.+||+.||++|||++|++++
T Consensus 234 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 234 RVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0000 0000000 00001123467899999999999999999999875
No 92
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.2e-40 Score=334.21 Aligned_cols=256 Identities=18% Similarity=0.186 Sum_probs=209.5
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
.|+..+.+|+|.-|+||.+.+. ++..+|+|++. +..........+...|-+||+.++||.++.+|+.++.+...|+||
T Consensus 78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmd-K~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMD-KESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHcCCCCceeEEEEEecCCCceEEEEEec-HHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 3455678999999999999985 56999999995 333333444567888999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCC--
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDP-- 712 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~-- 712 (833)
|||+||||..+.+++....+++..++.+|.+|.-||+||| ..|||.|||||+|||+.++|++-++||.++.....
T Consensus 157 eyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLH---mlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~P 233 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLH---MLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSP 233 (459)
T ss_pred ecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHH---hhceeeccCCcceeEEecCCcEEeeeccccccCCCCC
Confidence 9999999999999887888999999999999999999999 89999999999999999999999999998643210
Q ss_pred -------------------------------CCC---------------------CCccccccccccccccccccCCccc
Q 003296 713 -------------------------------SKS---------------------TGSLSTVAGSVGYIPPEYAYTMRVT 740 (833)
Q Consensus 713 -------------------------------~~~---------------------~~~~~~~~gt~~y~aPE~~~~~~~~ 740 (833)
... ......++||-.|.|||++.+...+
T Consensus 234 t~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHg 313 (459)
T KOG0610|consen 234 TLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHG 313 (459)
T ss_pred eeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCC
Confidence 000 0112347899999999999999999
Q ss_pred ccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCC
Q 003296 741 MAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARP 820 (833)
Q Consensus 741 ~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp 820 (833)
.++|+|+|||++|||+.|+.||.+.+....... ++-.....+. ....+..+.|||.+.|.+||++|.
T Consensus 314 sAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~N-----------Iv~~~l~Fp~--~~~vs~~akDLIr~LLvKdP~kRl 380 (459)
T KOG0610|consen 314 SAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRN-----------IVGQPLKFPE--EPEVSSAAKDLIRKLLVKDPSKRL 380 (459)
T ss_pred chhhHHHHHHHHHHHHhCCCCcCCCCchhhHHH-----------HhcCCCcCCC--CCcchhHHHHHHHHHhccChhhhh
Confidence 999999999999999999999987665433322 2222221111 114567889999999999999998
Q ss_pred C----HHHHHHH
Q 003296 821 K----MKSVLRM 828 (833)
Q Consensus 821 s----~~evl~~ 828 (833)
. +.||-+|
T Consensus 381 g~~rGA~eIK~H 392 (459)
T KOG0610|consen 381 GSKRGAAEIKRH 392 (459)
T ss_pred ccccchHHhhcC
Confidence 8 8887654
No 93
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=6.9e-40 Score=355.06 Aligned_cols=264 Identities=15% Similarity=0.207 Sum_probs=202.1
Q ss_pred HHhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEE
Q 003296 554 EAVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYL 632 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 632 (833)
.++|+..+.||+|+||.||+|... +|..+|+|++.... .....+.|.+|++++++++|||||+++++|..++..++
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI 80 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc---CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEE
Confidence 467888999999999999999975 78899999884221 11224679999999999999999999999999999999
Q ss_pred EEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCC
Q 003296 633 FYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDP 712 (833)
Q Consensus 633 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~ 712 (833)
||||+++|+|.+++.. ...+++.....++.|++.||+|||+ ..+|+||||||+||++++++.+|++|||++.....
T Consensus 81 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~--~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~ 156 (333)
T cd06650 81 CMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 156 (333)
T ss_pred EEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhh
Confidence 9999999999999976 3458899999999999999999994 24799999999999999999999999999876532
Q ss_pred CCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHH-HHHHHhhcccccccccc-----
Q 003296 713 SKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELA-KWVLRNSAQQDKLDHIL----- 786 (833)
Q Consensus 713 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~----- 786 (833)
.. .....||..|+|||++.+..++.++|||||||++|||++|+.||....... .................
T Consensus 157 ~~----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (333)
T cd06650 157 SM----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPR 232 (333)
T ss_pred hc----cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccC
Confidence 21 134579999999999988889999999999999999999999997432211 01100000000000000
Q ss_pred ---------cccccC--------------C--chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 787 ---------DFNVSR--------------T--SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 787 ---------~~~~~~--------------~--~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.+.... . .........++.+++.+||+.||++|||+.|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h 299 (333)
T cd06650 233 PPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVH 299 (333)
T ss_pred CccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhC
Confidence 000000 0 00000123567899999999999999999999875
No 94
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=5.7e-40 Score=353.14 Aligned_cols=244 Identities=21% Similarity=0.246 Sum_probs=194.5
Q ss_pred cccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEecCCceEEEEeeCC
Q 003296 561 NVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVLASDSAYLFYEYAP 638 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~ey~~ 638 (833)
++||+|+||.||+|+.. +|..||||+++.. ........+.+..|.+++... +||||+++++++..++..|+||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~-~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~ 79 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKD-VVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLN 79 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHH-HhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCC
Confidence 46999999999999975 7899999999422 211223345678888888764 89999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCc
Q 003296 639 KGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGS 718 (833)
Q Consensus 639 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~ 718 (833)
+|+|.+++.. ...+++.++..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++....... .
T Consensus 80 ~g~L~~~i~~--~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~ 152 (316)
T cd05620 80 GGDLMFHIQD--KGRFDLYRATFYAAEIVCGLQFLH---SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDN--R 152 (316)
T ss_pred CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCC--c
Confidence 9999999876 346889999999999999999999 78999999999999999999999999999875422221 2
Q ss_pred cccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchhHH
Q 003296 719 LSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVR 798 (833)
Q Consensus 719 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (833)
....+||+.|+|||++.+..++.++||||+||++|||++|+.||.+.... +........ .+..+.
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~-~~~~~~~~~--------~~~~~~------ 217 (316)
T cd05620 153 ASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED-ELFESIRVD--------TPHYPR------ 217 (316)
T ss_pred eeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH-HHHHHHHhC--------CCCCCC------
Confidence 24578999999999999889999999999999999999999999754432 211111111 011111
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHH-HHHH
Q 003296 799 SQMLTVLKVAVACVSVSPEARPKMK-SVLR 827 (833)
Q Consensus 799 ~~~~~~~~l~~~cl~~dP~~Rps~~-evl~ 827 (833)
....++.+++.+||+.||++||++. ++.+
T Consensus 218 ~~~~~~~~li~~~l~~dP~~R~~~~~~~~~ 247 (316)
T cd05620 218 WITKESKDILEKLFERDPTRRLGVVGNIRG 247 (316)
T ss_pred CCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 1234677899999999999999985 5653
No 95
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=4.7e-40 Score=355.43 Aligned_cols=250 Identities=22% Similarity=0.227 Sum_probs=198.9
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCC-CcccceEEEecCCceEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNS-NVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~-niv~~~~~~~~~~~~~lv 633 (833)
+|+..+.||+|+||.||+|+.. +++.||||++.. .........+.+..|+++++.++|+ +|+++++++...+..|+|
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~-~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv 79 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKK-DVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 79 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEH-HHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEE
Confidence 3677889999999999999974 678999999942 2222233456788999999999765 588899999999999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
|||+++|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+|||+++++.+||+|||+++.....
T Consensus 80 ~E~~~~g~L~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05587 80 MEYVNGGDLMYHIQQ--VGKFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG 154 (324)
T ss_pred EcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCC
Confidence 999999999999975 346899999999999999999999 789999999999999999999999999998754222
Q ss_pred CCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCC
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRT 793 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (833)
.. .....+||+.|+|||++.+..++.++||||+||++|||+||+.||.+...... ......... ..+
T Consensus 155 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~-~~~i~~~~~--------~~~-- 221 (324)
T cd05587 155 GK--TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDEL-FQSIMEHNV--------SYP-- 221 (324)
T ss_pred CC--ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH-HHHHHcCCC--------CCC--
Confidence 21 22456799999999999998999999999999999999999999975443221 111111100 011
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCCH-----HHHHHH
Q 003296 794 SLAVRSQMLTVLKVAVACVSVSPEARPKM-----KSVLRM 828 (833)
Q Consensus 794 ~~~~~~~~~~~~~l~~~cl~~dP~~Rps~-----~evl~~ 828 (833)
.....++.+++.+||+.||++||+. +|+.+|
T Consensus 222 ----~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 222 ----KSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred ----CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 1123467899999999999999986 566543
No 96
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.6e-39 Score=340.44 Aligned_cols=256 Identities=19% Similarity=0.291 Sum_probs=207.3
Q ss_pred HHhcCCccccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 554 EAVANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
.+.|+..+.||+|+||.||+|...+++.||||.++... ...++|.+|++++++++||||+++++++...+..++|
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 79 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-----MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIV 79 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-----ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeee
Confidence 45678889999999999999998788899999984221 2346799999999999999999999999999999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
|||+++|+|.+++.......++|.++..++.|++.|++||| ..+|+||||||+||++++++.+|++|||+++.....
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05068 80 TELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLE---AQNYIHRDLAARNVLVGENNICKVADFGLARVIKED 156 (261)
T ss_pred eecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCcceEEEcCCCCEEECCcceEEEccCC
Confidence 99999999999998654456899999999999999999999 789999999999999999999999999999876532
Q ss_pred CCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccccccC
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSR 792 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 792 (833)
... ......++..|+|||+..+..++.++|||||||++|||+| |+.||.+......+.. ....... ..
T Consensus 157 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~--~~~~~~~------~~-- 225 (261)
T cd05068 157 IYE-AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQ--VDQGYRM------PC-- 225 (261)
T ss_pred ccc-ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH--HHcCCCC------CC--
Confidence 211 1122233468999999998889999999999999999999 9999975432221111 1110000 00
Q ss_pred CchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 793 TSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 793 ~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
....+..+.+++.+|++.||++||++.++.+.|++.
T Consensus 226 ----~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 226 ----PPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred ----CCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 012345688999999999999999999999999863
No 97
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2e-40 Score=363.54 Aligned_cols=256 Identities=17% Similarity=0.207 Sum_probs=201.2
Q ss_pred HHhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEE
Q 003296 554 EAVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYL 632 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 632 (833)
.++|+..+.||+|+||.||+|... +++.||+|.+. +.........+.+.+|+++++.++|||||++++++..++..|+
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~-~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLS-KFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEE-HHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 467888999999999999999975 68999999984 2222222334568899999999999999999999999999999
Q ss_pred EEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCC
Q 003296 633 FYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDP 712 (833)
Q Consensus 633 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~ 712 (833)
|||||++|+|.+++.. ..+++..+..++.|++.||+||| +.+|+||||||+|||+++++.+||+|||+|+....
T Consensus 121 v~Ey~~gg~L~~~l~~---~~~~~~~~~~~~~qil~aL~~LH---~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~ 194 (370)
T cd05621 121 VMEYMPGGDLVNLMSN---YDVPEKWAKFYTAEVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDE 194 (370)
T ss_pred EEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEEecccceeccc
Confidence 9999999999999975 34788889999999999999999 78999999999999999999999999999987643
Q ss_pred CCCCCccccccccccccccccccCC----cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccc
Q 003296 713 SKSTGSLSTVAGSVGYIPPEYAYTM----RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDF 788 (833)
Q Consensus 713 ~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (833)
... ....+.+||+.|||||++.+. .++.++||||+||++|||++|+.||.+......+. .........
T Consensus 195 ~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~-~i~~~~~~~------ 266 (370)
T cd05621 195 TGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYS-KIMDHKNSL------ 266 (370)
T ss_pred CCc-eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHH-HHHhCCccc------
Confidence 221 122456899999999998653 37899999999999999999999997654322221 111110000
Q ss_pred cccCCchhHHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHH
Q 003296 789 NVSRTSLAVRSQMLTVLKVAVACVSVSPEA--RPKMKSVLRM 828 (833)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~--Rps~~evl~~ 828 (833)
..+ .....+..+.+++.+|++.+|.+ ||++.|+++|
T Consensus 267 ~~p----~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 267 NFP----EDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred CCC----CcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 000 01123446778888999866544 8999999876
No 98
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.9e-40 Score=363.10 Aligned_cols=257 Identities=15% Similarity=0.175 Sum_probs=198.6
Q ss_pred HhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
..|+..+.||+|+||.||+|.. .+++.||+|+.. .+.+.+|++++++++|||||+++++|..++..++|
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~----------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv 161 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ----------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLI 161 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh----------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEE
Confidence 4688899999999999999997 478999999762 23578999999999999999999999999999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
|||+. ++|.+++.. ...+++.+++.++.|++.||+||| +.+||||||||+|||++.++.+||+|||+|+.....
T Consensus 162 ~e~~~-~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~ylH---~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~ 235 (391)
T PHA03212 162 LPRYK-TDLYCYLAA--KRNIAICDILAIERSVLRAIQYLH---ENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDI 235 (391)
T ss_pred EecCC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHhEEEcCCCCEEEEeCCcccccccc
Confidence 99995 699998875 346899999999999999999999 789999999999999999999999999999754322
Q ss_pred CCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCcc------H-HHH--HHHhhcc-cc---
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNE------L-AKW--VLRNSAQ-QD--- 780 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~------~-~~~--~~~~~~~-~~--- 780 (833)
. .......+||+.|+|||++.+..++.++|||||||++|||+||+.||.+... . ... +...... ..
T Consensus 236 ~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~ 314 (391)
T PHA03212 236 N-ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFP 314 (391)
T ss_pred c-ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcC
Confidence 1 1122356899999999999988999999999999999999999988753211 0 000 1000000 00
Q ss_pred -----cccccc---------cccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 781 -----KLDHIL---------DFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 781 -----~~~~~~---------~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
...... .+............+.++.+++.+||+.||++|||++|++++
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h 376 (391)
T PHA03212 315 IDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF 376 (391)
T ss_pred cchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 000000 000000111112345678899999999999999999999875
No 99
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.7e-40 Score=359.22 Aligned_cols=247 Identities=15% Similarity=0.238 Sum_probs=195.2
Q ss_pred cccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEecCCceEEEEeeCC
Q 003296 561 NVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVLASDSAYLFYEYAP 638 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~ey~~ 638 (833)
+.||+|+||.||+|... +++.||+|+++.. ........+.+.+|+.++.++ +|||||++++++..++..|+||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~ 79 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKE-LVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 79 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhh-HhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCC
Confidence 46999999999999974 7899999999422 222223345688899998877 79999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCc
Q 003296 639 KGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGS 718 (833)
Q Consensus 639 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~ 718 (833)
+|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....... .
T Consensus 80 ~~~L~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~--~ 152 (329)
T cd05618 80 GGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--T 152 (329)
T ss_pred CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCC--c
Confidence 9999998875 346899999999999999999999 78999999999999999999999999999875422211 2
Q ss_pred cccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCc-------cHHHHHHHhhccccccccccccccc
Q 003296 719 LSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGN-------ELAKWVLRNSAQQDKLDHILDFNVS 791 (833)
Q Consensus 719 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (833)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.... ....+......... ..++
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~-------~~~p 225 (329)
T cd05618 153 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ-------IRIP 225 (329)
T ss_pred cccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCC-------CCCC
Confidence 245689999999999999899999999999999999999999995211 11122211111100 0011
Q ss_pred CCchhHHHHHHHHHHHHHhccCCCCCCCCC------HHHHHHH
Q 003296 792 RTSLAVRSQMLTVLKVAVACVSVSPEARPK------MKSVLRM 828 (833)
Q Consensus 792 ~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps------~~evl~~ 828 (833)
.....++.+++.+||+.||++||+ +.|+++|
T Consensus 226 ------~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 226 ------RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred ------CCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 123456789999999999999998 5677654
No 100
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=4.6e-40 Score=353.70 Aligned_cols=244 Identities=21% Similarity=0.261 Sum_probs=194.4
Q ss_pred cccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEecCCceEEEEeeCC
Q 003296 561 NVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVLASDSAYLFYEYAP 638 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~ey~~ 638 (833)
+.||+|+||.||+|... +++.||||+++.. ........+.+..|..++... +||||+++++++.+++..|+||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~ 79 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKD-VVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLN 79 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHH-HhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCC
Confidence 36899999999999974 6889999999422 211223345677888888864 89999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCc
Q 003296 639 KGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGS 718 (833)
Q Consensus 639 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~ 718 (833)
+|+|.+++.. ...+++.++..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++....... .
T Consensus 80 ~g~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~ 152 (316)
T cd05619 80 GGDLMFHIQS--CHKFDLPRATFYAAEIICGLQFLH---SKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA--K 152 (316)
T ss_pred CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCC--c
Confidence 9999999975 346899999999999999999999 78999999999999999999999999999875432221 2
Q ss_pred cccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchhHH
Q 003296 719 LSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVR 798 (833)
Q Consensus 719 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (833)
.....||+.|||||++.+..++.++|||||||++|||++|+.||...... +........ .+..+.
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~-~~~~~i~~~--------~~~~~~------ 217 (316)
T cd05619 153 TCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE-ELFQSIRMD--------NPCYPR------ 217 (316)
T ss_pred eeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhC--------CCCCCc------
Confidence 24567999999999999888999999999999999999999999754322 111111110 001111
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHH-HHHH
Q 003296 799 SQMLTVLKVAVACVSVSPEARPKMK-SVLR 827 (833)
Q Consensus 799 ~~~~~~~~l~~~cl~~dP~~Rps~~-evl~ 827 (833)
....++.+++.+||+.||++||++. ++.+
T Consensus 218 ~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 218 WLTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred cCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 1234677999999999999999997 6654
No 101
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.3e-40 Score=361.51 Aligned_cols=254 Identities=18% Similarity=0.177 Sum_probs=199.5
Q ss_pred hcCCccccccCcccEEEEEEc----CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCC-CCCcccceEEEecCCce
Q 003296 556 VANPLNVELKTRFSTYYKAVM----PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLS-NSNVMTPLAYVLASDSA 630 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~~~ 630 (833)
+|+..+.||+|+||.||+++. .+|+.||+|++............+.+.+|++++++++ ||||+++++++..++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 366788999999999999985 3689999999853222222334567889999999995 99999999999999999
Q ss_pred EEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeee
Q 003296 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVI 710 (833)
Q Consensus 631 ~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~ 710 (833)
++||||+++|+|.+++.. ...+++.++..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++..
T Consensus 81 ~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~ 155 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQ--RDNFSEDEVRFYSGEIILALEHLH---KLGIVYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (332)
T ss_pred EEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHeEECCCCCEEEeeCcCCccc
Confidence 999999999999999975 346899999999999999999999 789999999999999999999999999999865
Q ss_pred CCCCCCCccccccccccccccccccCC-cccccCcchhhHHHHHHHHhCCCcccCCcc--HHHHHHHhhccccccccccc
Q 003296 711 DPSKSTGSLSTVAGSVGYIPPEYAYTM-RVTMAGNVYSFGVILLELLTGKTAVNQGNE--LAKWVLRNSAQQDKLDHILD 787 (833)
Q Consensus 711 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~ 787 (833)
...... .....+||+.|||||++.+. .++.++|||||||++|||+||+.||..... ....+...... .+
T Consensus 156 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~-------~~ 227 (332)
T cd05614 156 LSEEKE-RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK-------CD 227 (332)
T ss_pred cccCCC-ccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc-------CC
Confidence 332221 22356899999999998765 478999999999999999999999963221 11111111111 01
Q ss_pred ccccCCchhHHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 003296 788 FNVSRTSLAVRSQMLTVLKVAVACVSVSPEARP-----KMKSVLRM 828 (833)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp-----s~~evl~~ 828 (833)
+.+. ......+.+++.+||+.||++|| +++|+++|
T Consensus 228 ~~~~------~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 228 PPFP------SFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred CCCC------CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 1111 11234677899999999999999 77788764
No 102
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.2e-39 Score=342.43 Aligned_cols=257 Identities=18% Similarity=0.253 Sum_probs=205.5
Q ss_pred HhcCCccccccCcccEEEEEEcC----CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCce
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP----SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSA 630 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~ 630 (833)
++|+..+.||+|+||.||+|... +...||||.++... .....++|.+|+.++++++||||+++++++...+..
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS---SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPV 80 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC---ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCce
Confidence 56888999999999999999874 24679999984221 122346799999999999999999999999999999
Q ss_pred EEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeee
Q 003296 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVI 710 (833)
Q Consensus 631 ~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~ 710 (833)
++||||+++|+|.+++... ...++|.++..++.|++.|++||| +.+|+||||||+||++++++.+|++|||+++..
T Consensus 81 ~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~ 156 (266)
T cd05033 81 MIITEYMENGSLDKFLREN-DGKFTVGQLVGMLRGIASGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRRL 156 (266)
T ss_pred EEEEEcCCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCCEEECccchhhcc
Confidence 9999999999999999764 236899999999999999999999 789999999999999999999999999999877
Q ss_pred CCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhccccccccccccc
Q 003296 711 DPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFN 789 (833)
Q Consensus 711 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (833)
.............+++.|+|||+..+..++.++|||||||++|||++ |..||....... ..... .......
T Consensus 157 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~-~~~~~-~~~~~~~------ 228 (266)
T cd05033 157 EDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD-VIKAV-EDGYRLP------ 228 (266)
T ss_pred cccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHH-HHHHH-HcCCCCC------
Confidence 42222111122345678999999988889999999999999999998 999996433221 11111 1100000
Q ss_pred ccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 790 VSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 790 ~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
. ....+..+.+++.+||+.+|++||+++||+++|+++
T Consensus 229 --~----~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 229 --P----PMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred --C----CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0 012345678999999999999999999999999875
No 103
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=9.1e-40 Score=343.55 Aligned_cols=261 Identities=16% Similarity=0.264 Sum_probs=209.1
Q ss_pred HhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
++|+..+.||+|+||.||+|+. .+|+.||||++... ..........|.+|++++++++||||+++++++...+..++|
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~-~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIF-EMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIV 80 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeecc-ccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEE
Confidence 3577889999999999999997 47899999987421 111223346789999999999999999999999999999999
Q ss_pred EeeCCCCChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeC
Q 003296 634 YEYAPKGTLFDVLHGCL--ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~ 711 (833)
|||+++|+|.+++.... ...+++..+..++.|+++||+||| +.+++||||||+||+++.++.++++|||++....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~ 157 (267)
T cd08228 81 LELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCCHHHEEEcCCCCEEECccccceecc
Confidence 99999999999886321 245788999999999999999999 7899999999999999999999999999988764
Q ss_pred CCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCcc-HHHHHHHhhcccccccccccccc
Q 003296 712 PSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNE-LAKWVLRNSAQQDKLDHILDFNV 790 (833)
Q Consensus 712 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 790 (833)
.... ......|++.|+|||++.+..++.++|||||||++|||++|+.||..... ...+..... ... .+..
T Consensus 158 ~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~-~~~------~~~~ 228 (267)
T cd08228 158 SKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIE-QCD------YPPL 228 (267)
T ss_pred chhH--HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHh-cCC------CCCC
Confidence 3221 12345789999999999888899999999999999999999999964332 222222111 100 0000
Q ss_pred cCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhcC
Q 003296 791 SRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNAR 833 (833)
Q Consensus 791 ~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~r 833 (833)
........+.+++.+||+.+|++||++.||++.++++|
T Consensus 229 -----~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 229 -----PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred -----ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 11233457889999999999999999999999999876
No 104
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=6.8e-40 Score=353.06 Aligned_cols=245 Identities=22% Similarity=0.247 Sum_probs=197.8
Q ss_pred cccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEecCCceEEEEeeCC
Q 003296 561 NVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVLASDSAYLFYEYAP 638 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~ey~~ 638 (833)
+.||+|+||.||+|... +++.||||+++ +...........+.+|+++++.+ +||||+++++++...+..|+||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~-~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~ 79 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLK-KDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVN 79 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEE-HHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCC
Confidence 46999999999999975 68899999994 22222233456788999999888 69999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCc
Q 003296 639 KGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGS 718 (833)
Q Consensus 639 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~ 718 (833)
+|+|.+++.. ...+++.++..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++....... .
T Consensus 80 ~~~L~~~~~~--~~~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--~ 152 (318)
T cd05570 80 GGDLMFHIQR--SGRFDEPRARFYAAEIVLGLQFLH---ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGV--T 152 (318)
T ss_pred CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCC--c
Confidence 9999999876 346899999999999999999999 78999999999999999999999999999875322221 2
Q ss_pred cccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchhHH
Q 003296 719 LSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVR 798 (833)
Q Consensus 719 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (833)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||...... ........... ..+ .
T Consensus 153 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~-~~~~~i~~~~~--------~~~------~ 217 (318)
T cd05570 153 TSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED-ELFQSILEDEV--------RYP------R 217 (318)
T ss_pred ccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH-HHHHHHHcCCC--------CCC------C
Confidence 23467999999999999989999999999999999999999999754322 21111111100 000 1
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCH-----HHHHHH
Q 003296 799 SQMLTVLKVAVACVSVSPEARPKM-----KSVLRM 828 (833)
Q Consensus 799 ~~~~~~~~l~~~cl~~dP~~Rps~-----~evl~~ 828 (833)
....++.+++.+||+.||++||++ .+++++
T Consensus 218 ~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 218 WLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred cCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 223467899999999999999999 888764
No 105
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=6.2e-40 Score=354.33 Aligned_cols=249 Identities=22% Similarity=0.225 Sum_probs=198.7
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEecCCceEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv 633 (833)
+|+..+.||+|+||.||+|+.. +++.||||++.. .........+.+..|.+++..+ +||+|+++++++...+..|+|
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~-~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv 79 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKK-DVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFV 79 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEH-HHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEE
Confidence 4677889999999999999975 688999999952 2222233345678899998887 589999999999999999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
|||+++|+|.+++.. ...+++.++..++.|++.||+||| +.+|+||||||+|||+++++.+||+|||+++.....
T Consensus 80 ~E~~~~g~L~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~ 154 (323)
T cd05616 80 MEYVNGGDLMYQIQQ--VGRFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD 154 (323)
T ss_pred EcCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHH---HCCEEecCCCHHHeEECCCCcEEEccCCCceecCCC
Confidence 999999999999875 346899999999999999999999 789999999999999999999999999999864322
Q ss_pred CCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCC
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRT 793 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (833)
.. .....+||+.|||||++.+..++.++|||||||++|||+||+.||.+..... .......... ..+
T Consensus 155 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~-~~~~i~~~~~--------~~p-- 221 (323)
T cd05616 155 GV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE-LFQSIMEHNV--------AYP-- 221 (323)
T ss_pred CC--ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCC--------CCC--
Confidence 21 2245689999999999999999999999999999999999999997544322 1111111100 000
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCCH-----HHHHH
Q 003296 794 SLAVRSQMLTVLKVAVACVSVSPEARPKM-----KSVLR 827 (833)
Q Consensus 794 ~~~~~~~~~~~~~l~~~cl~~dP~~Rps~-----~evl~ 827 (833)
.....++.+++.+|++.||++|++. .++.+
T Consensus 222 ----~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~ 256 (323)
T cd05616 222 ----KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 256 (323)
T ss_pred ----CcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhc
Confidence 1234567899999999999999984 56654
No 106
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1.3e-39 Score=346.26 Aligned_cols=257 Identities=21% Similarity=0.265 Sum_probs=204.3
Q ss_pred HhcCCccccccCcccEEEEEEc------CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCC
Q 003296 555 AVANPLNVELKTRFSTYYKAVM------PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD 628 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~ 628 (833)
.+|...+.+|+|+||.||++.. .++..+|+|.+.... ....+.|.+|++++++++||||++++++|...+
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS----DNARKDFHREAELLTNLQHEHIVKFYGVCVEGD 80 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC----HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC
Confidence 4677889999999999999984 245679999984221 123467999999999999999999999999999
Q ss_pred ceEEEEeeCCCCChhhhhhcCC-----------CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCC
Q 003296 629 SAYLFYEYAPKGTLFDVLHGCL-----------ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLK 697 (833)
Q Consensus 629 ~~~lv~ey~~~g~L~~~l~~~~-----------~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~ 697 (833)
..++||||+++|+|.+++.... ...++|.+++.++.|++.||+||| ..+++||||||+||++++++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH---~~~i~H~dlkp~Nili~~~~ 157 (288)
T cd05093 81 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENL 157 (288)
T ss_pred ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCC
Confidence 9999999999999999997432 125899999999999999999999 78999999999999999999
Q ss_pred CceeccceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhh
Q 003296 698 EPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNS 776 (833)
Q Consensus 698 ~~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~ 776 (833)
.+|++|||+++...............+++.|+|||++.+..++.++|||||||++|||+| |+.||....... ......
T Consensus 158 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~-~~~~i~ 236 (288)
T cd05093 158 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE-VIECIT 236 (288)
T ss_pred cEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHH
Confidence 999999999986543221111223456789999999988889999999999999999999 899987543221 111111
Q ss_pred cccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 777 AQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
... ... .. ...+.++.+++.+||+.||.+|||++||.+.|+++
T Consensus 237 -~~~-~~~-----~~------~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~ 279 (288)
T cd05093 237 -QGR-VLQ-----RP------RTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNL 279 (288)
T ss_pred -cCC-cCC-----CC------CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence 111 000 00 11234688999999999999999999999999875
No 107
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.3e-40 Score=367.56 Aligned_cols=255 Identities=15% Similarity=0.181 Sum_probs=198.8
Q ss_pred hcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
+|...+.||+|+||.||+|.. .+|+.||||++. +.........+.+.+|++++++++|||||+++++|.+++..|+||
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~-~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLL-KSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEE-HHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 577789999999999999986 488999999984 222222233567899999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
||+++|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+|++|||+++......
T Consensus 81 E~~~gg~L~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH---~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~ 155 (377)
T cd05629 81 EFLPGGDLMTMLIK--YDTFSEDVTRFYMAECVLAIEAVH---KLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQH 155 (377)
T ss_pred eCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEEeeccccccccccc
Confidence 99999999999975 346889999999999999999999 7899999999999999999999999999986331100
Q ss_pred C------------CC---------------------------------ccccccccccccccccccCCcccccCcchhhH
Q 003296 715 S------------TG---------------------------------SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFG 749 (833)
Q Consensus 715 ~------------~~---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~G 749 (833)
. .. .....+||+.|||||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 235 (377)
T cd05629 156 DSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLG 235 (377)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecc
Confidence 0 00 00125799999999999988899999999999
Q ss_pred HHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCC---CCHHHHH
Q 003296 750 VILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEAR---PKMKSVL 826 (833)
Q Consensus 750 vvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~R---ps~~evl 826 (833)
|++|||+||+.||........+. ........ . ..+. ......++.+++.+|+. +|.+| |++.|++
T Consensus 236 vil~elltG~~Pf~~~~~~~~~~-~i~~~~~~---~---~~p~----~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l 303 (377)
T cd05629 236 AIMFECLIGWPPFCSENSHETYR-KIINWRET---L---YFPD----DIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIK 303 (377)
T ss_pred hhhhhhhcCCCCCCCCCHHHHHH-HHHccCCc---c---CCCC----CCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHh
Confidence 99999999999997554322211 11110000 0 0000 01123467889999997 67665 6999998
Q ss_pred HH
Q 003296 827 RM 828 (833)
Q Consensus 827 ~~ 828 (833)
+|
T Consensus 304 ~h 305 (377)
T cd05629 304 SH 305 (377)
T ss_pred cC
Confidence 76
No 108
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=6.8e-40 Score=346.41 Aligned_cols=259 Identities=17% Similarity=0.207 Sum_probs=203.6
Q ss_pred HHHhcCCccccccCcccEEEEEEcC------CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEec
Q 003296 553 MEAVANPLNVELKTRFSTYYKAVMP------SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLA 626 (833)
Q Consensus 553 ~~~~~~~~~~ig~g~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~ 626 (833)
.+++|+..+.||+|+||.||+|... ++..||||++..... .....+|.+|+.++++++|||||++++++..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~---~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~ 80 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAAS---MRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 80 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCC---HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence 4567889999999999999999752 357899999842211 1234579999999999999999999999999
Q ss_pred CCceEEEEeeCCCCChhhhhhcCC--------CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCC
Q 003296 627 SDSAYLFYEYAPKGTLFDVLHGCL--------ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKE 698 (833)
Q Consensus 627 ~~~~~lv~ey~~~g~L~~~l~~~~--------~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~ 698 (833)
....++||||+++|+|.++++... ...++|.++..++.|+++||+||| +.+++||||||+||++++++.
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~vH~dlkp~Nil~~~~~~ 157 (277)
T cd05062 81 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFT 157 (277)
T ss_pred CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCcchheEEEcCCCC
Confidence 999999999999999999987532 124688999999999999999999 789999999999999999999
Q ss_pred ceeccceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhc
Q 003296 699 PQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSA 777 (833)
Q Consensus 699 ~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~ 777 (833)
+|++|||+++...............+++.|||||++.+..++.++|||||||++|||++ |..||.+... .........
T Consensus 158 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~-~~~~~~~~~ 236 (277)
T cd05062 158 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN-EQVLRFVME 236 (277)
T ss_pred EEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHHHc
Confidence 99999999876543221111123456788999999988889999999999999999999 6888865432 222111111
Q ss_pred ccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 003296 778 QQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831 (833)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~ 831 (833)
. .. .. .. ...+..+.+++.+|++.||++|||+.|++++|++
T Consensus 237 ~-~~-~~-----~~------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 237 G-GL-LD-----KP------DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred C-Cc-CC-----CC------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 1 10 00 00 1223467899999999999999999999999874
No 109
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=2.7e-40 Score=362.01 Aligned_cols=255 Identities=17% Similarity=0.240 Sum_probs=205.6
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
+|...+.||+|+||.||+|... +|+.||||+++ ..........+.+.+|+++++.++||||+++++++.+++..|+||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~-~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLR-KSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEE-HHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 5777899999999999999975 79999999994 222222344567999999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
||+++|+|.+++... ..+++..+..++.|++.||+||| ..+|+||||||+||+++.++.+|++|||+++......
T Consensus 81 e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 155 (350)
T cd05573 81 EYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVH---KLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAK 155 (350)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccC
Confidence 999999999999863 56899999999999999999999 7899999999999999999999999999998654332
Q ss_pred ---------------------------CCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCcc
Q 003296 715 ---------------------------STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNE 767 (833)
Q Consensus 715 ---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~ 767 (833)
.........||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~ 235 (350)
T cd05573 156 DREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTL 235 (350)
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCH
Confidence 00112346799999999999998999999999999999999999999986553
Q ss_pred HHHHHHHhhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCC-HHHHHHH
Q 003296 768 LAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPK-MKSVLRM 828 (833)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps-~~evl~~ 828 (833)
...+.... ...... ..+.. ...+.++.+++.+|+. ||++||+ ++|++++
T Consensus 236 ~~~~~~i~-~~~~~~------~~p~~----~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 236 QETYNKII-NWKESL------RFPPD----PPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred HHHHHHHh-ccCCcc------cCCCC----CCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 32222111 100000 00000 0134567899999997 9999999 9999876
No 110
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.1e-39 Score=347.48 Aligned_cols=257 Identities=22% Similarity=0.281 Sum_probs=204.7
Q ss_pred HhcCCccccccCcccEEEEEEcC------CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCC
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP------SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD 628 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~ 628 (833)
.+|...+.||+|+||.||+|+.. ++..+|+|.+.... ....+.|.+|++++++++||||+++++++...+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT----LAARKDFQREAELLTNLQHEHIVKFYGVCGDGD 80 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc----HHHHHHHHHHHHHHhcCCCCCcceEEEEEccCC
Confidence 35777889999999999999742 45679999984221 122467999999999999999999999999999
Q ss_pred ceEEEEeeCCCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeC
Q 003296 629 SAYLFYEYAPKGTLFDVLHGCL--------------ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLK 694 (833)
Q Consensus 629 ~~~lv~ey~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~ 694 (833)
..++||||+++|+|.+++.... ...++|..++.++.|++.|++||| +.+|+||||||+||+++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nil~~ 157 (291)
T cd05094 81 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLVG 157 (291)
T ss_pred ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEc
Confidence 9999999999999999997532 234899999999999999999999 88999999999999999
Q ss_pred CCCCceeccceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHH
Q 003296 695 SLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVL 773 (833)
Q Consensus 695 ~~~~~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~ 773 (833)
.++.+|++|||+++...............|+..|+|||++.+..++.++|||||||++|||+| |+.||....... ...
T Consensus 158 ~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~~~ 236 (291)
T cd05094 158 ANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE-VIE 236 (291)
T ss_pred cCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-HHH
Confidence 999999999999976543221111233567889999999998889999999999999999999 999986543322 111
Q ss_pred HhhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 774 RNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
. ... ...... ....+..+.+++.+||+.||++|||++||+++|+++
T Consensus 237 ~-~~~-~~~~~~-----------~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~ 282 (291)
T cd05094 237 C-ITQ-GRVLER-----------PRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHAL 282 (291)
T ss_pred H-HhC-CCCCCC-----------CccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 1 111 110000 011245678999999999999999999999999875
No 111
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.9e-40 Score=367.02 Aligned_cols=255 Identities=16% Similarity=0.188 Sum_probs=197.4
Q ss_pred hcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
.|+..+.||+|+||.||+|+. .+++.||||++.. .........+.+.+|++++++++|||||+++++|.+++..|+||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~-~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRK-KDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 80 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeH-HHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEE
Confidence 467788999999999999997 4789999999942 22222233567899999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
|||++|+|.+++.+ ...+++.....++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+|+......
T Consensus 81 E~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~al~~lH---~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~ 155 (382)
T cd05625 81 DYIPGGDMMSLLIR--MGIFPEDLARFYIAELTCAVESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (382)
T ss_pred eCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEeECCCCccccccc
Confidence 99999999999976 345888889999999999999999 7899999999999999999999999999975321000
Q ss_pred ---------------------------------------------CCCccccccccccccccccccCCcccccCcchhhH
Q 003296 715 ---------------------------------------------STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFG 749 (833)
Q Consensus 715 ---------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~G 749 (833)
........+||+.|||||++.+..++.++||||+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (382)
T cd05625 156 DSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG 235 (382)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEech
Confidence 00001235799999999999988999999999999
Q ss_pred HHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCC---HHHHH
Q 003296 750 VILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPK---MKSVL 826 (833)
Q Consensus 750 vvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps---~~evl 826 (833)
|++|||++|+.||............ ....... ..+. ......++.+++.+|+ .+|++|++ +.|++
T Consensus 236 vil~elltG~~Pf~~~~~~~~~~~i-~~~~~~~------~~p~----~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~ 303 (382)
T cd05625 236 VILYEMLVGQPPFLAQTPLETQMKV-INWQTSL------HIPP----QAKLSPEASDLIIKLC-RGPEDRLGKNGADEIK 303 (382)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHH-HccCCCc------CCCC----cccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHh
Confidence 9999999999999865433221111 1100000 0000 0122345677777765 49999987 88887
Q ss_pred HH
Q 003296 827 RM 828 (833)
Q Consensus 827 ~~ 828 (833)
+|
T Consensus 304 ~h 305 (382)
T cd05625 304 AH 305 (382)
T ss_pred cC
Confidence 64
No 112
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.3e-39 Score=345.02 Aligned_cols=257 Identities=21% Similarity=0.273 Sum_probs=204.5
Q ss_pred HhcCCccccccCcccEEEEEEcC------CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCC
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP------SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD 628 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~ 628 (833)
+.|...+.||+|+||.||+|... ++..||||+++.... ....+.|.+|++++++++||||+++++++...+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 81 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS---NDARKDFEREAELLTNFQHENIVKFYGVCTEGD 81 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC---HHHHHHHHHHHHHHHhcCCCCchheeeEEecCC
Confidence 45777889999999999999863 357899999842211 123468999999999999999999999999999
Q ss_pred ceEEEEeeCCCCChhhhhhcCC------------CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCC
Q 003296 629 SAYLFYEYAPKGTLFDVLHGCL------------ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSL 696 (833)
Q Consensus 629 ~~~lv~ey~~~g~L~~~l~~~~------------~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~ 696 (833)
..++||||+++|+|.++++... ...++|.++..++.|++.|++||| ..+++||||||+||+++.+
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~ 158 (280)
T cd05049 82 PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLA---SQHFVHRDLATRNCLVGYD 158 (280)
T ss_pred CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeeccccccceEEEcCC
Confidence 9999999999999999997532 235789999999999999999999 7899999999999999999
Q ss_pred CCceeccceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHh
Q 003296 697 KEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRN 775 (833)
Q Consensus 697 ~~~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~ 775 (833)
+.+|++|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |+.||.+.... ......
T Consensus 159 ~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~-~~~~~~ 237 (280)
T cd05049 159 LVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE-EVIECI 237 (280)
T ss_pred CeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH-HHHHHH
Confidence 9999999999986533221111123456789999999998899999999999999999999 99998754322 111111
Q ss_pred hcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 003296 776 SAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831 (833)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~ 831 (833)
. . ..... . ....+..+.+++.+||+.||++||++.||++.|++
T Consensus 238 ~-~-~~~~~--------~---~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 238 T-Q-GRLLQ--------R---PRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred H-c-CCcCC--------C---CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 1 1 10000 0 01234567899999999999999999999999863
No 113
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-39 Score=335.18 Aligned_cols=261 Identities=22% Similarity=0.324 Sum_probs=198.2
Q ss_pred ccccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhc--CCCCCcccceEEEecCC----ceEEE
Q 003296 560 LNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGK--LSNSNVMTPLAYVLASD----SAYLF 633 (833)
Q Consensus 560 ~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~~~~~~~~~~----~~~lv 633 (833)
.+++|+|+||.||||.+ +++.||||++.. ...+.|..|-+|.+- ++|+||++++++-.... +++||
T Consensus 215 ~eli~~Grfg~V~KaqL-~~~~VAVKifp~-------~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLV 286 (534)
T KOG3653|consen 215 LELIGRGRFGCVWKAQL-DNRLVAVKIFPE-------QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLV 286 (534)
T ss_pred HHHhhcCccceeehhhc-cCceeEEEecCH-------HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEE
Confidence 46899999999999999 569999999942 234678888888765 58999999999877655 89999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcC------CCCCeeecCCCccceeeCCCCCceeccceee
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGF------TSNPILLLDLSTRNIFLKSLKEPQIGDIELC 707 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~------~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~ 707 (833)
+||.++|+|.++|+. ..++|....+|+..+|+||+|||+. .+++|+|||||+.|||+.+|+++.|+|||+|
T Consensus 287 t~fh~kGsL~dyL~~---ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLA 363 (534)
T KOG3653|consen 287 TEFHPKGSLCDYLKA---NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLA 363 (534)
T ss_pred eeeccCCcHHHHHHh---ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecccee
Confidence 999999999999984 5799999999999999999999964 3568999999999999999999999999999
Q ss_pred eeeCCCCCCCccccccccccccccccccCCc-cc-----ccCcchhhHHHHHHHHhCCCcccC-C-ccHHHHHHHhhccc
Q 003296 708 KVIDPSKSTGSLSTVAGSVGYIPPEYAYTMR-VT-----MAGNVYSFGVILLELLTGKTAVNQ-G-NELAKWVLRNSAQQ 779 (833)
Q Consensus 708 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-----~~~Dv~S~Gvvl~elltg~~p~~~-~-~~~~~~~~~~~~~~ 779 (833)
..+.+..........+||.+|||||++.+.. +. .+.||||+|.|+|||+++...++. . .+..--........
T Consensus 364 l~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~h 443 (534)
T KOG3653|consen 364 LRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNH 443 (534)
T ss_pred EEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCC
Confidence 9998777666666789999999999987532 21 469999999999999997654421 0 00000000000010
Q ss_pred cccccc----c----cccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 780 DKLDHI----L----DFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 780 ~~~~~~----~----~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
..++++ + .|.++.. ......+..+.+.+..||+.||+.|.|+.=|.+++.++
T Consensus 444 Pt~e~mq~~VV~kK~RP~~p~~-W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l 503 (534)
T KOG3653|consen 444 PTLEEMQELVVRKKQRPKIPDA-WRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAEL 503 (534)
T ss_pred CCHHHHHHHHHhhccCCCChhh-hhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHH
Confidence 111110 0 1111110 01123466788999999999999999999888877654
No 114
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.3e-39 Score=345.45 Aligned_cols=257 Identities=20% Similarity=0.309 Sum_probs=203.1
Q ss_pred HhcCCccccccCcccEEEEEEc-----CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCc
Q 003296 555 AVANPLNVELKTRFSTYYKAVM-----PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDS 629 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~ 629 (833)
++|+..+.||+|+||.||+|+. .++..||+|.+..... ......|.+|++++++++|||||++++++..++.
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 81 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINN---PQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQP 81 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCC---HHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCc
Confidence 4577789999999999999984 3568999999942211 1224678999999999999999999999999999
Q ss_pred eEEEEeeCCCCChhhhhhcCC---------------CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeC
Q 003296 630 AYLFYEYAPKGTLFDVLHGCL---------------ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLK 694 (833)
Q Consensus 630 ~~lv~ey~~~g~L~~~l~~~~---------------~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~ 694 (833)
.|+||||+++|+|.+++.... ...+++.+...++.|++.||+||| +.+|+||||||+||+++
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~nili~ 158 (283)
T cd05090 82 VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLS---SHFFVHKDLAARNILIG 158 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hcCeehhccccceEEEc
Confidence 999999999999999985321 124789999999999999999999 78999999999999999
Q ss_pred CCCCceeccceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHH
Q 003296 695 SLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVL 773 (833)
Q Consensus 695 ~~~~~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~ 773 (833)
+++.+|++|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||.+... .....
T Consensus 159 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~-~~~~~ 237 (283)
T cd05090 159 EQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN-QEVIE 237 (283)
T ss_pred CCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH-HHHHH
Confidence 999999999999987643322222234556788999999988889999999999999999999 9999965432 11111
Q ss_pred HhhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 003296 774 RNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831 (833)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~ 831 (833)
.. ...... . . ....+.++.+++.+||+.||++||++.+|.++|..
T Consensus 238 ~~-~~~~~~-~-----~------~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 238 MV-RKRQLL-P-----C------SEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HH-HcCCcC-C-----C------CCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 11 110100 0 0 01223467889999999999999999999999864
No 115
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=7.5e-40 Score=358.16 Aligned_cols=249 Identities=20% Similarity=0.290 Sum_probs=193.2
Q ss_pred HhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
.+|+..+.||+|+||.||+|+.. +|+.||||++.... .....+.|.+|++++++++|||||++++++...+..++|
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 150 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH---EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVL 150 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC---cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEE
Confidence 34556789999999999999964 78999999984221 112346789999999999999999999999999999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
||||++|+|.+.. ..++..+..++.|++.||+||| +.+|+||||||+|||+++++.+||+|||+++.....
T Consensus 151 ~e~~~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~ 221 (353)
T PLN00034 151 LEFMDGGSLEGTH------IADEQFLADVARQILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQT 221 (353)
T ss_pred EecCCCCcccccc------cCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEcccccceecccc
Confidence 9999999986532 3567778889999999999999 789999999999999999999999999999876432
Q ss_pred CCCCccccccccccccccccccC-----CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccc
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYT-----MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDF 788 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (833)
.. ......||..|+|||++.. ...+.++|||||||++|||++|+.||..... ..|........... ..
T Consensus 222 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~-~~~~~~~~~~~~~~----~~ 294 (353)
T PLN00034 222 MD--PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQ-GDWASLMCAICMSQ----PP 294 (353)
T ss_pred cc--cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCC-ccHHHHHHHHhccC----CC
Confidence 21 1234679999999998743 2245689999999999999999999973221 11211110000000 00
Q ss_pred cccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 789 NVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
. .......++.+++.+||+.||++|||+.|+++|
T Consensus 295 ~------~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 295 E------APATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred C------CCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 011234578899999999999999999999986
No 116
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=2.4e-40 Score=357.62 Aligned_cols=240 Identities=21% Similarity=0.233 Sum_probs=190.9
Q ss_pred cccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHH-HHhcCCCCCcccceEEEecCCceEEEEeeCC
Q 003296 561 NVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELE-VLGKLSNSNVMTPLAYVLASDSAYLFYEYAP 638 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~-~l~~l~H~niv~~~~~~~~~~~~~lv~ey~~ 638 (833)
+.||+|+||+||+|+.. +|+.||||++... ........+++.+|.. +++.++|||||++++++...+..|+||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKK-AILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVN 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHH-HHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCC
Confidence 36899999999999974 7999999999422 2222223345666655 5688999999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCc
Q 003296 639 KGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGS 718 (833)
Q Consensus 639 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~ 718 (833)
+|+|.+++.. ...+++..+..++.|+++||+||| ..+|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 80 ~g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH---~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~--~~ 152 (323)
T cd05575 80 GGELFFHLQR--ERSFPEPRARFYAAEIASALGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS--KT 152 (323)
T ss_pred CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCC--Cc
Confidence 9999999975 446899999999999999999999 7899999999999999999999999999987542222 12
Q ss_pred cccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchhHH
Q 003296 719 LSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVR 798 (833)
Q Consensus 719 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (833)
....+||+.|||||++.+..++.++|||||||++|||++|+.||..... .+.......... ... .
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~-~~~~~~i~~~~~--------~~~------~ 217 (323)
T cd05575 153 TSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT-AEMYDNILNKPL--------RLK------P 217 (323)
T ss_pred cccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH-HHHHHHHHcCCC--------CCC------C
Confidence 2456799999999999988999999999999999999999999975432 222211111100 000 0
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHH
Q 003296 799 SQMLTVLKVAVACVSVSPEARPKMK 823 (833)
Q Consensus 799 ~~~~~~~~l~~~cl~~dP~~Rps~~ 823 (833)
..+.++.+++.+|++.||++||+++
T Consensus 218 ~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 218 NISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred CCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 1244678999999999999999985
No 117
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.3e-40 Score=361.05 Aligned_cols=255 Identities=16% Similarity=0.197 Sum_probs=203.1
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
+|+..+.||+|+||.||+|... +|+.||||+++.. ........+.+.+|+++++.++||||+++++++.+.+..|+||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKS-VLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHH-HhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 5778899999999999999974 7899999999522 2222234567899999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
||+++|+|.+++... ...+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 81 e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~lH---~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~ 156 (330)
T cd05601 81 EYQPGGDLLSLLNRY-EDQFDEDMAQFYLAELVLAIHSVH---QMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANK 156 (330)
T ss_pred CCCCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEcccCchHheEECCCCCEEeccCCCCeECCCCC
Confidence 999999999999864 246899999999999999999999 7899999999999999999999999999998764332
Q ss_pred CCCcccccccccccccccccc------CCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccc
Q 003296 715 STGSLSTVAGSVGYIPPEYAY------TMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDF 788 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (833)
.. ......||+.|+|||++. ...++.++|||||||++|||++|+.||........+. ........ ..
T Consensus 157 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~-~i~~~~~~----~~- 229 (330)
T cd05601 157 MV-NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYN-NIMNFQRF----LK- 229 (330)
T ss_pred ce-eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHH-HHHcCCCc----cC-
Confidence 21 223457999999999986 4567899999999999999999999997654432221 11111000 00
Q ss_pred cccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 789 NVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.+. ....+.++.+++.+|++ +|++|||++++++|
T Consensus 230 -~~~----~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 230 -FPE----DPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred -CCC----CCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 000 01234567889999998 99999999999865
No 118
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.8e-39 Score=338.17 Aligned_cols=250 Identities=17% Similarity=0.227 Sum_probs=196.8
Q ss_pred cccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEeeCCC
Q 003296 561 NVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPK 639 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey~~~ 639 (833)
+.||+|+||.||+|... +|+.||+|.+.... .......|.+|++++++++||||++++++|...+..++||||+++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 77 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL---PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQG 77 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC---CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccC
Confidence 46899999999999974 79999999884211 112346799999999999999999999999999999999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCcc
Q 003296 640 GTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSL 719 (833)
Q Consensus 640 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~~ 719 (833)
|+|.+++... ...++|.+++.++.|++.||+||| +.+|+||||||+||+++.++.+|++|||+++...........
T Consensus 78 ~~L~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 153 (252)
T cd05084 78 GDFLTFLRTE-GPRLKVKELIQMVENAAAGMEYLE---SKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTG 153 (252)
T ss_pred CcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEEcCCCcEEECccccCcccccccccccC
Confidence 9999999753 345899999999999999999999 789999999999999999999999999998765322111111
Q ss_pred ccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccccccCCchhHH
Q 003296 720 STVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVR 798 (833)
Q Consensus 720 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (833)
....++..|+|||++.+..++.++|||||||++|||++ |..||....... ........... .. ..
T Consensus 154 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~--~~~~~~~~~~~------~~------~~ 219 (252)
T cd05084 154 GMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ--TREAIEQGVRL------PC------PE 219 (252)
T ss_pred CCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH--HHHHHHcCCCC------CC------cc
Confidence 11223567999999988889999999999999999998 888886433211 11111110000 00 11
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 003296 799 SQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831 (833)
Q Consensus 799 ~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~ 831 (833)
..+.++.+++.+|++.+|++|||+.||.++|++
T Consensus 220 ~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 220 LCPDAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 234578899999999999999999999999874
No 119
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-40 Score=340.15 Aligned_cols=250 Identities=18% Similarity=0.281 Sum_probs=213.6
Q ss_pred HHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEE
Q 003296 554 EAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYL 632 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 632 (833)
..-|+..+.||+|.|+.|-.|+. =+|..||||++.+. + .+........+|++.|+-++|||||++|++...+..+||
T Consensus 17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKT-K-lD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyL 94 (864)
T KOG4717|consen 17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKT-K-LDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYL 94 (864)
T ss_pred eeeehhhhhhcCCceehhhhhhhhcccceeEEEEeccc-c-cchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEE
Confidence 34566778899999999999986 48999999999532 2 233345678899999999999999999999999999999
Q ss_pred EEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceee-CCCCCceeccceeeeeeC
Q 003296 633 FYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFL-KSLKEPQIGDIELCKVID 711 (833)
Q Consensus 633 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill-~~~~~~ki~dfgl~~~~~ 711 (833)
|+|.-++|||+|++-++ ...+.+....+++.||..|+.|+| ...+||||+||+||.+ .+-|-+|+.|||++..+.
T Consensus 95 iLELGD~GDl~DyImKH-e~Gl~E~La~kYF~QI~~AI~YCH---qLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~ 170 (864)
T KOG4717|consen 95 ILELGDGGDLFDYIMKH-EEGLNEDLAKKYFAQIVHAISYCH---QLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ 170 (864)
T ss_pred EEEecCCchHHHHHHhh-hccccHHHHHHHHHHHHHHHHHHh---hhhhhcccCCcceeEEeeecCceEeeeccccccCC
Confidence 99999999999999865 345889999999999999999999 7789999999999877 466899999999998876
Q ss_pred CCCCCCccccccccccccccccccCCccc-ccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccc
Q 003296 712 PSKSTGSLSTVAGSVGYIPPEYAYTMRVT-MAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNV 790 (833)
Q Consensus 712 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (833)
++. ...+.||+..|-|||++.+..|+ +++||||+|||||-+++|++||.+.++- +.+..++|..+
T Consensus 171 PG~---kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDS-----------ETLTmImDCKY 236 (864)
T KOG4717|consen 171 PGK---KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDS-----------ETLTMIMDCKY 236 (864)
T ss_pred Ccc---hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccch-----------hhhhhhhcccc
Confidence 665 45789999999999999999998 7899999999999999999999866553 33445555554
Q ss_pred cCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 003296 791 SRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLR 827 (833)
Q Consensus 791 ~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~ 827 (833)
.-+ ...+.++.++|..||..||++|.+.+||+.
T Consensus 237 tvP----shvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 237 TVP----SHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred cCc----hhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 432 356789999999999999999999999975
No 120
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.5e-39 Score=340.62 Aligned_cols=257 Identities=22% Similarity=0.292 Sum_probs=209.6
Q ss_pred HHHhcCCccccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEE
Q 003296 553 MEAVANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYL 632 (833)
Q Consensus 553 ~~~~~~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 632 (833)
...+|...+.||+|+||.||+|...++..+|+|.+.... ......+.+|+.++++++||||+++++++...+..++
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 79 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDD----LLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYI 79 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccc----hhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEE
Confidence 455688889999999999999999889999999984221 1234679999999999999999999999999999999
Q ss_pred EEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCC
Q 003296 633 FYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDP 712 (833)
Q Consensus 633 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~ 712 (833)
||||+++|+|.++++......++|.++..++.|++.|++||| ..+|+||||||+||++++++.+|++|||++.....
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~ 156 (261)
T cd05148 80 ITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLE---EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKE 156 (261)
T ss_pred EEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccCcceEEEcCCceEEEccccchhhcCC
Confidence 999999999999998755567899999999999999999999 78899999999999999999999999999976643
Q ss_pred CCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhccccccccccccccc
Q 003296 713 SKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVS 791 (833)
Q Consensus 713 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (833)
... ......++..|+|||+.....++.++|||||||++|||++ |+.||...... +...... ..... ..
T Consensus 157 ~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~-~~~~~~~-~~~~~------~~- 225 (261)
T cd05148 157 DVY--LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH-EVYDQIT-AGYRM------PC- 225 (261)
T ss_pred ccc--cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH-HHHHHHH-hCCcC------CC-
Confidence 221 1123456778999999988889999999999999999998 89999654321 1111111 10000 00
Q ss_pred CCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 792 RTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 792 ~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
....+..+.+++.+||+.||++|||++|+.+.|+++
T Consensus 226 -----~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 226 -----PAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred -----CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 012345678999999999999999999999999864
No 121
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.8e-40 Score=366.57 Aligned_cols=255 Identities=15% Similarity=0.179 Sum_probs=198.9
Q ss_pred hcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
+|+..+.||+|+||.||+|+. .+|+.||||++.. .........+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~-~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRK-ADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcH-HHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 577889999999999999996 4789999999942 22222234567899999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
|||++|+|.+++.+ ...+++.....++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+|.......
T Consensus 81 E~~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~ 155 (376)
T cd05598 81 DYIPGGDMMSLLIR--LGIFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (376)
T ss_pred eCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccc
Confidence 99999999999976 346888888999999999999999 7899999999999999999999999999975321000
Q ss_pred -----------------------------------------CCCccccccccccccccccccCCcccccCcchhhHHHHH
Q 003296 715 -----------------------------------------STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILL 753 (833)
Q Consensus 715 -----------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ 753 (833)
........+||+.|||||++.+..++.++|||||||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvily 235 (376)
T cd05598 156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 235 (376)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceee
Confidence 000012357999999999999889999999999999999
Q ss_pred HHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCC---CHHHHHHH
Q 003296 754 ELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARP---KMKSVLRM 828 (833)
Q Consensus 754 elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp---s~~evl~~ 828 (833)
||++|+.||.+......... ........ .... ......++.+++.+|+ .+|.+|+ ++.|+++|
T Consensus 236 ell~G~~Pf~~~~~~~~~~~-i~~~~~~~------~~~~----~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 236 EMLVGQPPFLADTPAETQLK-VINWETTL------HIPS----QAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred ehhhCCCCCCCCCHHHHHHH-HhccCccc------cCCC----CCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 99999999986543322111 11100000 0000 0112345677788876 5999999 89999875
No 122
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=1.5e-39 Score=343.96 Aligned_cols=256 Identities=20% Similarity=0.277 Sum_probs=199.5
Q ss_pred HhcCCccccccCcccEEEEEEc-CCCc----eEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCc
Q 003296 555 AVANPLNVELKTRFSTYYKAVM-PSGM----SYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDS 629 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~ 629 (833)
.+|+..+.||+|+||.||+|.. .+|. .||+|.+... ......+++..|+.++++++|||||++++++. ...
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~ 82 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR---SGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GAS 82 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc---cchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCc
Confidence 4677889999999999999986 3555 4777777321 11123457888999999999999999999886 456
Q ss_pred eEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeee
Q 003296 630 AYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKV 709 (833)
Q Consensus 630 ~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~ 709 (833)
.++|+||+++|+|.++++.. ...++|..+..++.|++.||+||| +.+++||||||+||++++++.+|++|||+++.
T Consensus 83 ~~~i~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~ 158 (279)
T cd05111 83 LQLVTQLSPLGSLLDHVRQH-RDSLDPQRLLNWCVQIAKGMYYLE---EHRMVHRNLAARNILLKSDSIVQIADFGVADL 158 (279)
T ss_pred cEEEEEeCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEEcCCcccee
Confidence 78999999999999999753 346899999999999999999999 78899999999999999999999999999987
Q ss_pred eCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccc
Q 003296 710 IDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDF 788 (833)
Q Consensus 710 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (833)
..............|+..|+|||++.+..++.++|||||||++||++| |+.||.+.... .. ........... .+
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~-~~-~~~~~~~~~~~---~~ 233 (279)
T cd05111 159 LYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH-EV-PDLLEKGERLA---QP 233 (279)
T ss_pred ccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-HH-HHHHHCCCcCC---CC
Confidence 644332222234567889999999988889999999999999999998 99999754321 11 11111111100 00
Q ss_pred cccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 789 NVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
. .....+.+++.+||+.||++|||+.|+++.|+.+
T Consensus 234 ~---------~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~ 268 (279)
T cd05111 234 Q---------ICTIDVYMVMVKCWMIDENVRPTFKELANEFTRM 268 (279)
T ss_pred C---------CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 0 1123567889999999999999999999998764
No 123
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=6.7e-40 Score=371.21 Aligned_cols=256 Identities=20% Similarity=0.204 Sum_probs=204.0
Q ss_pred HHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCC----
Q 003296 554 EAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD---- 628 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~---- 628 (833)
...|...+.||+|+||+||+|.. .+|+.||||++..... .......+.+|+.++..++|+|||++++.+...+
T Consensus 31 ~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~--~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 31 AKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM--SEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred CCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC--CHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 45788889999999999999986 5899999999843211 1223467889999999999999999988776432
Q ss_pred ----ceEEEEeeCCCCChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceec
Q 003296 629 ----SAYLFYEYAPKGTLFDVLHGCL--ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIG 702 (833)
Q Consensus 629 ----~~~lv~ey~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~ 702 (833)
..++||||+++|+|.++++... ...+++..+..++.|++.||+|+| +.+|+||||||+|||++.++.+||+
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH---~~~IiHrDLKP~NILl~~~~~vkL~ 185 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVH---SKHMIHRDIKSANILLCSNGLVKLG 185 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEeCCCCEEEE
Confidence 3689999999999999997532 246889999999999999999999 7899999999999999999999999
Q ss_pred cceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccc
Q 003296 703 DIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKL 782 (833)
Q Consensus 703 dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 782 (833)
|||+++..............+||+.|||||++.+..++.++|||||||++|||++|+.||.+.. ....+...... ..
T Consensus 186 DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~-~~~~~~~~~~~--~~ 262 (496)
T PTZ00283 186 DFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN-MEEVMHKTLAG--RY 262 (496)
T ss_pred ecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC-HHHHHHHHhcC--CC
Confidence 9999987643322222345789999999999999899999999999999999999999997543 22222221111 00
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 783 DHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
++ . ....+.++.+++.+||+.||++||++.|++++
T Consensus 263 ----~~-~------~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 263 ----DP-L------PPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred ----CC-C------CCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 00 0 01234568899999999999999999999875
No 124
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.9e-39 Score=347.08 Aligned_cols=260 Identities=20% Similarity=0.265 Sum_probs=206.2
Q ss_pred HHhcCCccccccCcccEEEEEEc------CCCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEec
Q 003296 554 EAVANPLNVELKTRFSTYYKAVM------PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVLA 626 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~ 626 (833)
.++|...+.||+|+||.||+|.. .++..||||+++.... ....+.|.+|+++++++ +||||++++++|..
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 110 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH---SSEREALMSELKIMSHLGNHENIVNLLGACTI 110 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC---hHHHHHHHHHHHHHHhccCCCCcceEEEEEec
Confidence 45788899999999999999974 2456899999842211 12246799999999999 79999999999999
Q ss_pred CCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceecccee
Q 003296 627 SDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIEL 706 (833)
Q Consensus 627 ~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl 706 (833)
.+..++||||+++|+|.++++......+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+|++|||+
T Consensus 111 ~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~dfg~ 187 (302)
T cd05055 111 GGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNVLLTHGKIVKICDFGL 187 (302)
T ss_pred CCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeehhhhccceEEEcCCCeEEECCCcc
Confidence 999999999999999999998644445899999999999999999999 78899999999999999999999999999
Q ss_pred eeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhccccccccc
Q 003296 707 CKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHI 785 (833)
Q Consensus 707 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 785 (833)
++...............++..|+|||++.+..++.++|||||||++|||++ |+.||............ .......
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~-~~~~~~~--- 263 (302)
T cd05055 188 ARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKL-IKEGYRM--- 263 (302)
T ss_pred cccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHH-HHcCCcC---
Confidence 986543221111123456788999999988889999999999999999998 99999754332221111 1110000
Q ss_pred ccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 786 LDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
... ...+.++.+++.+|++.+|++|||+.|+++.|+++
T Consensus 264 ---~~~------~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 264 ---AQP------EHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred ---CCC------CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 000 11234688999999999999999999999999864
No 125
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.6e-39 Score=337.79 Aligned_cols=252 Identities=24% Similarity=0.341 Sum_probs=205.8
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
+|+..+.||+|+||.||+|+.. +|+.||+|.+.... ......+++.+|++++++++||||+++++++..++..++||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSK--MNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVM 78 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhh--CCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEE
Confidence 3667789999999999999974 78999999984221 11234578999999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
||+++++|.++++......+++.++..++.|++.||.||| ..+|+||||||+||+++.++.+|++|||+++......
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH---~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~ 155 (256)
T cd08529 79 EYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLH---SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT 155 (256)
T ss_pred EeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEeCCCCEEEcccccceeccCcc
Confidence 9999999999998754567899999999999999999999 7899999999999999999999999999998765432
Q ss_pred CCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCc
Q 003296 715 STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTS 794 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (833)
. ......|++.|+|||+..+..++.++|||||||++|||++|+.||....... ...... . ..... .
T Consensus 156 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~-~-~~~~~-----~---- 221 (256)
T cd08529 156 N--FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA-LILKII-R-GVFPP-----V---- 221 (256)
T ss_pred c--hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHH-c-CCCCC-----C----
Confidence 2 1234578999999999998889999999999999999999999997544211 111111 1 00000 0
Q ss_pred hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 795 LAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 795 ~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
......++.+++.+||+.+|++||++.|++++
T Consensus 222 --~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 222 --SQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred --ccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 01234578899999999999999999999875
No 126
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.7e-39 Score=357.85 Aligned_cols=260 Identities=20% Similarity=0.260 Sum_probs=203.8
Q ss_pred HHhcCCccccccCcccEEEEEEcC------CCceEEEEEccccchhhhccChhHHHHHHHHHhcCC-CCCcccceEEEec
Q 003296 554 EAVANPLNVELKTRFSTYYKAVMP------SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLS-NSNVMTPLAYVLA 626 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~~~~~~ 626 (833)
.+++...+.||+|+||.||+|++. .+..||||+++.... ....+.+.+|+++|.++. |||||+++++|..
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~ 112 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR---SSEKQALMSELKIMSHLGPHLNIVNLLGACTK 112 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC---hhHHHHHHHHHHHHHhcCCCCCeEEEEEEEcc
Confidence 446777899999999999999853 356899999953211 122457899999999997 9999999999999
Q ss_pred CCceEEEEeeCCCCChhhhhhcCCC-------------------------------------------------------
Q 003296 627 SDSAYLFYEYAPKGTLFDVLHGCLE------------------------------------------------------- 651 (833)
Q Consensus 627 ~~~~~lv~ey~~~g~L~~~l~~~~~------------------------------------------------------- 651 (833)
++..++|||||++|+|.++++....
T Consensus 113 ~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (401)
T cd05107 113 GGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPM 192 (401)
T ss_pred CCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccch
Confidence 9999999999999999999974311
Q ss_pred -----------------------------------------CCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccc
Q 003296 652 -----------------------------------------NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690 (833)
Q Consensus 652 -----------------------------------------~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~N 690 (833)
..++|.....++.|++.||+||| ..+|+||||||+|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrdlkp~N 269 (401)
T cd05107 193 QDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLA---SKNCVHRDLAARN 269 (401)
T ss_pred hcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh---cCCcCcccCCcce
Confidence 24678888999999999999999 7899999999999
Q ss_pred eeeCCCCCceeccceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHH
Q 003296 691 IFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELA 769 (833)
Q Consensus 691 ill~~~~~~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~ 769 (833)
||+++++.+|++|||+++...............|++.|||||++.+..++.++|||||||++|||++ |+.||.......
T Consensus 270 iLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~ 349 (401)
T cd05107 270 VLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNE 349 (401)
T ss_pred EEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchH
Confidence 9999999999999999986532221111223467889999999988889999999999999999998 889986433222
Q ss_pred HHHHHhhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 770 KWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
.... ........ ..+ .....++.+++.+||+.+|++||+++||++.|+++
T Consensus 350 ~~~~-~~~~~~~~------~~p------~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 350 QFYN-AIKRGYRM------AKP------AHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred HHHH-HHHcCCCC------CCC------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 1111 11111100 000 11245788999999999999999999999999874
No 127
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=6.8e-40 Score=353.34 Aligned_cols=240 Identities=19% Similarity=0.229 Sum_probs=193.6
Q ss_pred cccccCcccEEEEEEc----CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEee
Q 003296 561 NVELKTRFSTYYKAVM----PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEY 636 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey 636 (833)
+.||+|+||.||++.. .+|+.||||++.... ........+.+|++++++++|||||++++++..++..|+||||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 79 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKAT--LKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDF 79 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHH--hhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcC
Confidence 5799999999999875 368999999994221 1222345678999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCC
Q 003296 637 APKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKST 716 (833)
Q Consensus 637 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~ 716 (833)
+++|+|.+++.. ...+++..+..++.|+++||+||| +.+|+||||||+||++++++.+||+|||+++.......
T Consensus 80 ~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~- 153 (318)
T cd05582 80 LRGGDLFTRLSK--EVMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK- 153 (318)
T ss_pred CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC-
Confidence 999999999975 346899999999999999999999 78999999999999999999999999999886543221
Q ss_pred CccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchh
Q 003296 717 GSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLA 796 (833)
Q Consensus 717 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (833)
......||+.|||||++.+..++.++|||||||++|||++|+.||....... .......... .++
T Consensus 154 -~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~-~~~~i~~~~~--------~~p----- 218 (318)
T cd05582 154 -KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKE-TMTMILKAKL--------GMP----- 218 (318)
T ss_pred -ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHH-HHHHHHcCCC--------CCC-----
Confidence 2245689999999999988889999999999999999999999997543321 1111111100 011
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCHHH
Q 003296 797 VRSQMLTVLKVAVACVSVSPEARPKMKS 824 (833)
Q Consensus 797 ~~~~~~~~~~l~~~cl~~dP~~Rps~~e 824 (833)
......+.+++.+||+.||++||++.+
T Consensus 219 -~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 219 -QFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred -CCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 112346778999999999999999544
No 128
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=3.3e-39 Score=336.83 Aligned_cols=252 Identities=21% Similarity=0.258 Sum_probs=202.6
Q ss_pred HhcCCccccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
++|+..+.||+|+||.||+|...++..||||.+... . ...++|.+|++++++++||||++++++|...+..++||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~-~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-S----MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVT 78 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCC-c----ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEE
Confidence 356778899999999999999877778999998422 1 22467999999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
||+++|+|.+++.... ..++|.+++.++.|++.||+||| +.+++||||||+||+++.++.+|++|||.++......
T Consensus 79 e~~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05113 79 EYMSNGCLLNYLREHG-KRFQPSQLLEMCKDVCEGMAYLE---SKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE 154 (256)
T ss_pred EcCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCCEEECCCccceecCCCc
Confidence 9999999999997532 36899999999999999999999 7899999999999999999999999999988654322
Q ss_pred CCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccccccCC
Q 003296 715 STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRT 793 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (833)
.. ......++..|+|||+..+..++.++|||||||++|||++ |+.||....... ...... ..... ...
T Consensus 155 ~~-~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~-~~~~~~-~~~~~------~~~-- 223 (256)
T cd05113 155 YT-SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE-TVEKVS-QGLRL------YRP-- 223 (256)
T ss_pred ee-ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH-HHHHHh-cCCCC------CCC--
Confidence 11 1122346678999999988889999999999999999999 999997543321 111111 11100 000
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 003296 794 SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLL 830 (833)
Q Consensus 794 ~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~ 830 (833)
...+..+.+++.+||+.||.+||++.++++.|+
T Consensus 224 ----~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 224 ----HLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred ----CCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 012357789999999999999999999998874
No 129
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=2.1e-39 Score=349.83 Aligned_cols=244 Identities=22% Similarity=0.232 Sum_probs=195.4
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCC-CCCcccceEEEecCCceEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLS-NSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~~~~lv 633 (833)
+|+..+.||+|+||.||+|... +|+.||||++. +.........+.+..|+++++.+. ||+|+++++++..++..|+|
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~-~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv 79 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILK-KDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFV 79 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEE-HHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEE
Confidence 3677889999999999999964 78999999994 222222334567889999999886 56788899999999999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
|||+++|+|.+++.. ...+++.++..++.|++.||+||| +.+|+||||||+|||+++++.+||+|||+++.....
T Consensus 80 ~Ey~~~g~L~~~i~~--~~~l~~~~~~~i~~qi~~al~~lH---~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~ 154 (323)
T cd05615 80 MEYVNGGDLMYHIQQ--VGKFKEPQAVFYAAEISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD 154 (323)
T ss_pred EcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeccccccccCCC
Confidence 999999999999875 346899999999999999999999 789999999999999999999999999998754322
Q ss_pred CCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCC
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRT 793 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (833)
.. ......||+.|||||++.+..++.++||||+||++|||++|+.||.+.... ........... ..+
T Consensus 155 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~-~~~~~i~~~~~--------~~p-- 221 (323)
T cd05615 155 GV--TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED-ELFQSIMEHNV--------SYP-- 221 (323)
T ss_pred Cc--cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH-HHHHHHHhCCC--------CCC--
Confidence 21 223467999999999999888999999999999999999999999754332 11111111100 000
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCCH
Q 003296 794 SLAVRSQMLTVLKVAVACVSVSPEARPKM 822 (833)
Q Consensus 794 ~~~~~~~~~~~~~l~~~cl~~dP~~Rps~ 822 (833)
...+.++.+++.+|++.||++|++.
T Consensus 222 ----~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 222 ----KSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred ----ccCCHHHHHHHHHHcccCHhhCCCC
Confidence 1223467899999999999999984
No 130
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=5e-40 Score=354.90 Aligned_cols=240 Identities=21% Similarity=0.251 Sum_probs=189.9
Q ss_pred cccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHH-HHhcCCCCCcccceEEEecCCceEEEEeeCC
Q 003296 561 NVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELE-VLGKLSNSNVMTPLAYVLASDSAYLFYEYAP 638 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~-~l~~l~H~niv~~~~~~~~~~~~~lv~ey~~ 638 (833)
++||+|+||.||+|+.. +|+.||+|++... ........+.+.+|.. +++.++|||||++++++.+.+..|+||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKK-TILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVN 79 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHH-HHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCC
Confidence 46999999999999974 7899999999422 2222233455666665 6788999999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCc
Q 003296 639 KGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGS 718 (833)
Q Consensus 639 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~ 718 (833)
+|+|.+++.. ...+++.++..++.|+++||+||| ..+|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 80 ~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~--~~ 152 (321)
T cd05603 80 GGELFFHLQR--ERCFLEPRARFYAAEVASAIGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE--ET 152 (321)
T ss_pred CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC--Cc
Confidence 9999998875 345788888999999999999999 7899999999999999999999999999987532221 12
Q ss_pred cccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchhHH
Q 003296 719 LSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVR 798 (833)
Q Consensus 719 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (833)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ........... . .+. .
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~i~~~~--~------~~~------~ 217 (321)
T cd05603 153 TSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV-SQMYDNILHKP--L------QLP------G 217 (321)
T ss_pred cccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH-HHHHHHHhcCC--C------CCC------C
Confidence 2456799999999999888899999999999999999999999975432 22222111110 0 011 1
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHH
Q 003296 799 SQMLTVLKVAVACVSVSPEARPKMK 823 (833)
Q Consensus 799 ~~~~~~~~l~~~cl~~dP~~Rps~~ 823 (833)
....++.+++.+|++.||++||++.
T Consensus 218 ~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 218 GKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCHHHHHHHHHHccCCHhhcCCCC
Confidence 1234678999999999999999764
No 131
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.7e-39 Score=351.24 Aligned_cols=244 Identities=21% Similarity=0.216 Sum_probs=191.4
Q ss_pred cccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHH-HHhcCCCCCcccceEEEecCCceEEEEeeCC
Q 003296 561 NVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELE-VLGKLSNSNVMTPLAYVLASDSAYLFYEYAP 638 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~-~l~~l~H~niv~~~~~~~~~~~~~lv~ey~~ 638 (833)
+.||+|+||.||+|+.. +++.||+|++... ..........+.+|.. +++.++|||||++++++..++..|+||||++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKK-AILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYIN 79 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHH-HHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCC
Confidence 36999999999999975 6789999999422 2222223345555554 5688999999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCc
Q 003296 639 KGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGS 718 (833)
Q Consensus 639 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~ 718 (833)
+|+|.+++.. ...+.+.....++.|+++||+||| +.+|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 80 ~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH---~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~--~~ 152 (325)
T cd05602 80 GGELFYHLQR--ERCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN--GT 152 (325)
T ss_pred CCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCC--CC
Confidence 9999999976 345778888889999999999999 7899999999999999999999999999997543221 12
Q ss_pred cccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchhHH
Q 003296 719 LSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVR 798 (833)
Q Consensus 719 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (833)
....+||+.|||||++.+..++.++||||+||++|||++|+.||.+...... .......... .. .
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~i~~~~~~----~~----------~ 217 (325)
T cd05602 153 TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM-YDNILNKPLQ----LK----------P 217 (325)
T ss_pred cccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHH-HHHHHhCCcC----CC----------C
Confidence 2456799999999999998999999999999999999999999975443221 1111111000 00 1
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 003296 799 SQMLTVLKVAVACVSVSPEARPKMKSVLR 827 (833)
Q Consensus 799 ~~~~~~~~l~~~cl~~dP~~Rps~~evl~ 827 (833)
.....+.+++.+|++.||.+||++.+.+.
T Consensus 218 ~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 218 NITNSARHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred CCCHHHHHHHHHHcccCHHHCCCCCCCHH
Confidence 22346778999999999999999875443
No 132
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=5.6e-39 Score=338.69 Aligned_cols=257 Identities=18% Similarity=0.231 Sum_probs=201.2
Q ss_pred cCCccccccCcccEEEEEEcC----CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCc---
Q 003296 557 ANPLNVELKTRFSTYYKAVMP----SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDS--- 629 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~--- 629 (833)
|...+.||+|+||.||+|++. .+..||||+++.... .......|.+|++++++++||||+++++++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 78 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH--TYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQK 78 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC--CHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCcccc
Confidence 456789999999999999863 247899999842211 11234679999999999999999999999876554
Q ss_pred ---eEEEEeeCCCCChhhhhhcCC----CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceec
Q 003296 630 ---AYLFYEYAPKGTLFDVLHGCL----ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIG 702 (833)
Q Consensus 630 ---~~lv~ey~~~g~L~~~l~~~~----~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~ 702 (833)
.++||||+++|+|.+++.... ...+++..+..++.|++.||+||| ..+|+||||||+||++++++.+|++
T Consensus 79 ~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~ 155 (273)
T cd05035 79 IPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLS---NRNFIHRDLAARNCMLREDMTVCVA 155 (273)
T ss_pred CcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchheEEECCCCeEEEC
Confidence 799999999999999986431 236899999999999999999999 7899999999999999999999999
Q ss_pred cceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhccccc
Q 003296 703 DIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDK 781 (833)
Q Consensus 703 dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 781 (833)
|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||.+... .+........ ..
T Consensus 156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~-~~~~~~~~~~-~~ 233 (273)
T cd05035 156 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN-HEIYDYLRHG-NR 233 (273)
T ss_pred CccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHcC-CC
Confidence 9999987643332211122345778999999988889999999999999999999 8899865432 2222111111 10
Q ss_pred ccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 782 LDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
. .. ....+.++.+++.+||+.||++|||+.|++++|+++
T Consensus 234 ~------~~------~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 234 L------KQ------PEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred C------CC------CcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0 01 112345788999999999999999999999999875
No 133
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-40 Score=365.08 Aligned_cols=255 Identities=19% Similarity=0.256 Sum_probs=206.3
Q ss_pred cCCccccccCcccEEEEEEcCCC-ceEEEEEccccchhhhccChhHHHHHHHHHhcCC-CCCcccceEEE-ec---C---
Q 003296 557 ANPLNVELKTRFSTYYKAVMPSG-MSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLS-NSNVMTPLAYV-LA---S--- 627 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~~~~-~~---~--- 627 (833)
..+.++|.+|||+.||.|....+ ..||+|++-.. ++...+...+||++|++|+ |||||.+++.. .. +
T Consensus 39 v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~----de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~ 114 (738)
T KOG1989|consen 39 VTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN----DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV 114 (738)
T ss_pred EEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC----CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence 44668999999999999998655 99999999422 3345678899999999998 99999999943 22 1
Q ss_pred CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceee
Q 003296 628 DSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELC 707 (833)
Q Consensus 628 ~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~ 707 (833)
-+++|.||||.||.|-|++..+....+++.++++|+.|+|+|+++||.. .++|||||||-+||||+.++..|+||||-|
T Consensus 115 ~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSa 193 (738)
T KOG1989|consen 115 WEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSA 193 (738)
T ss_pred eEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCccccc
Confidence 2578999999999999999977666799999999999999999999965 688999999999999999999999999987
Q ss_pred eeeCCCC-CCCcc------ccccccccccccccc---cCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhc
Q 003296 708 KVIDPSK-STGSL------STVAGSVGYIPPEYA---YTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSA 777 (833)
Q Consensus 708 ~~~~~~~-~~~~~------~~~~gt~~y~aPE~~---~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 777 (833)
....... ..... -...-|+.|+|||++ .+...++|+||||+||+||-|+....||++...
T Consensus 194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~---------- 263 (738)
T KOG1989|consen 194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK---------- 263 (738)
T ss_pred ccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc----------
Confidence 6432211 11000 113469999999986 366789999999999999999999999985432
Q ss_pred ccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhcC
Q 003296 778 QQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNAR 833 (833)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~r 833 (833)
-.|++..+..+. ....+..+.+||..||+.||++||++-||+..+.+++
T Consensus 264 -----laIlng~Y~~P~--~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~ 312 (738)
T KOG1989|consen 264 -----LAILNGNYSFPP--FPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELA 312 (738)
T ss_pred -----eeEEeccccCCC--CccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHh
Confidence 234444444332 2356788999999999999999999999999887653
No 134
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=8.1e-40 Score=353.76 Aligned_cols=247 Identities=17% Similarity=0.233 Sum_probs=195.2
Q ss_pred cccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEecCCceEEEEeeCC
Q 003296 561 NVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVLASDSAYLFYEYAP 638 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~ey~~ 638 (833)
+.||+|+||.||+|... +++.||||++.. .........+.+.+|+.++.++ +||||+++++++...+..|+||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~-~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 79 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKK-ELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVN 79 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEH-HHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCC
Confidence 46999999999999974 789999999942 2222233456788999999998 69999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCc
Q 003296 639 KGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGS 718 (833)
Q Consensus 639 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~ 718 (833)
+|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 80 ~~~L~~~~~~--~~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--~~ 152 (327)
T cd05617 80 GGDLMFHMQR--QRKLPEEHARFYAAEICIALNFLH---ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG--DT 152 (327)
T ss_pred CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCC--Cc
Confidence 9999998875 346999999999999999999999 7899999999999999999999999999997532221 12
Q ss_pred cccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCc-----cHHHHHHHhhcccccccccccccccCC
Q 003296 719 LSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGN-----ELAKWVLRNSAQQDKLDHILDFNVSRT 793 (833)
Q Consensus 719 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (833)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||.... ....+........ ....
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~---------~~~~- 222 (327)
T cd05617 153 TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEK---------PIRI- 222 (327)
T ss_pred eecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhC---------CCCC-
Confidence 245789999999999999899999999999999999999999996311 1112221111110 0000
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCCH------HHHHHH
Q 003296 794 SLAVRSQMLTVLKVAVACVSVSPEARPKM------KSVLRM 828 (833)
Q Consensus 794 ~~~~~~~~~~~~~l~~~cl~~dP~~Rps~------~evl~~ 828 (833)
+...+..+.+++.+||+.||++||++ .++.+|
T Consensus 223 ---p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 260 (327)
T cd05617 223 ---PRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSH 260 (327)
T ss_pred ---CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence 01123457799999999999999985 566553
No 135
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.9e-39 Score=344.24 Aligned_cols=256 Identities=18% Similarity=0.260 Sum_probs=202.0
Q ss_pred hcCCccccccCcccEEEEEEcC------CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCc
Q 003296 556 VANPLNVELKTRFSTYYKAVMP------SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDS 629 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~ 629 (833)
+|...+.||+|+||.||+|... +++.||||+++.... ....+.|.+|+.++++++|||||++++++...+.
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~ 82 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAE---GPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQP 82 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCC---HHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCc
Confidence 4556788999999999999863 357899999953221 1224678999999999999999999999999999
Q ss_pred eEEEEeeCCCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCC
Q 003296 630 AYLFYEYAPKGTLFDVLHGCL--------------ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKS 695 (833)
Q Consensus 630 ~~lv~ey~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~ 695 (833)
.++++||+++++|.+++.... ...+++..+..++.|++.||+|+| +.+|+||||||+||++++
T Consensus 83 ~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH---~~gi~H~dlkp~Nil~~~ 159 (283)
T cd05091 83 LSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLS---SHHVVHKDLATRNVLVFD 159 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HcCccccccchhheEecC
Confidence 999999999999999985321 235889999999999999999999 789999999999999999
Q ss_pred CCCceeccceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHH
Q 003296 696 LKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLR 774 (833)
Q Consensus 696 ~~~~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~ 774 (833)
++.+|++|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |..||.+... .++...
T Consensus 160 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-~~~~~~ 238 (283)
T cd05091 160 KLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-QDVIEM 238 (283)
T ss_pred CCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH-HHHHHH
Confidence 99999999999886643322222233456789999999988889999999999999999998 8888865432 222222
Q ss_pred hhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 003296 775 NSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831 (833)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~ 831 (833)
.... .. .. .. ...+..+.+++.+||+.+|++||+++||++.|+.
T Consensus 239 i~~~-~~-~~-----~~------~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 239 IRNR-QV-LP-----CP------DDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHcC-Cc-CC-----CC------CCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 1111 10 00 00 1234467899999999999999999999999874
No 136
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1e-39 Score=358.26 Aligned_cols=259 Identities=16% Similarity=0.182 Sum_probs=202.5
Q ss_pred HHHHhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCce
Q 003296 552 AMEAVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSA 630 (833)
Q Consensus 552 ~~~~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~ 630 (833)
...++|+..+.||+|+||.||+|... +++.||+|++.. .........+.+.+|+++++.++|||||++++++..++..
T Consensus 40 ~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~-~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~ 118 (371)
T cd05622 40 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSK-FEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL 118 (371)
T ss_pred cchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEH-HHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEE
Confidence 34578889999999999999999975 789999999842 2222223345688999999999999999999999999999
Q ss_pred EEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeee
Q 003296 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVI 710 (833)
Q Consensus 631 ~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~ 710 (833)
|+|||||++|+|.+++.. ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++..
T Consensus 119 ~lv~Ey~~gg~L~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~ 192 (371)
T cd05622 119 YMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 192 (371)
T ss_pred EEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHEEECCCCCEEEEeCCceeEc
Confidence 999999999999999975 34788888899999999999999 889999999999999999999999999999876
Q ss_pred CCCCCCCccccccccccccccccccCC----cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccc
Q 003296 711 DPSKSTGSLSTVAGSVGYIPPEYAYTM----RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHIL 786 (833)
Q Consensus 711 ~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (833)
..... ......+||+.|||||++.+. .++.++|||||||++|||++|+.||........+.. .........
T Consensus 193 ~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~-i~~~~~~~~--- 267 (371)
T cd05622 193 NKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSK-IMNHKNSLT--- 267 (371)
T ss_pred CcCCc-ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHH-HHcCCCccc---
Confidence 43321 122456899999999998653 378999999999999999999999986544322211 111101000
Q ss_pred cccccCCchhHHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHHH
Q 003296 787 DFNVSRTSLAVRSQMLTVLKVAVACVSVSPEA--RPKMKSVLRML 829 (833)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~--Rps~~evl~~L 829 (833)
.+ .....+..+.+++.+|+..+|.+ ||++.|+++|.
T Consensus 268 ---~~----~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 268 ---FP----DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred ---CC----CcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 00 01123456788999999844443 78999998863
No 137
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=4.2e-40 Score=355.96 Aligned_cols=243 Identities=20% Similarity=0.225 Sum_probs=192.2
Q ss_pred cccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHH-HHhcCCCCCcccceEEEecCCceEEEEeeCC
Q 003296 561 NVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELE-VLGKLSNSNVMTPLAYVLASDSAYLFYEYAP 638 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~-~l~~l~H~niv~~~~~~~~~~~~~lv~ey~~ 638 (833)
+.||+|+||.||+|+. .+|+.||||++... ........+.+.+|.. +++.++|||||++++++..++..|+||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKK-IVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVN 79 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHH-HhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCC
Confidence 4689999999999996 47999999999422 2222233456666765 4678999999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCc
Q 003296 639 KGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGS 718 (833)
Q Consensus 639 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~ 718 (833)
+|+|.+++.. ...+++.++..++.|++.||+||| +.+|+||||||+|||+++++.+||+|||+++....... .
T Consensus 80 ~~~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH---~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~--~ 152 (325)
T cd05604 80 GGELFFHLQR--ERSFPEPRARFYAAEIASALGYLH---SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSD--T 152 (325)
T ss_pred CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCC--C
Confidence 9999998875 456899999999999999999999 78999999999999999999999999999875422211 2
Q ss_pred cccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchhHH
Q 003296 719 LSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVR 798 (833)
Q Consensus 719 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (833)
....+||+.|||||++.+..++.++|||||||++|||++|+.||...... +........ . ..+.+
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~-~~~~~~~~~-~---~~~~~---------- 217 (325)
T cd05604 153 TTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA-EMYDNILHK-P---LVLRP---------- 217 (325)
T ss_pred cccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH-HHHHHHHcC-C---ccCCC----------
Confidence 24567999999999999989999999999999999999999999754322 211111111 0 00000
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 003296 799 SQMLTVLKVAVACVSVSPEARPKMKSVL 826 (833)
Q Consensus 799 ~~~~~~~~l~~~cl~~dP~~Rps~~evl 826 (833)
.....+.+++.+|++.||.+||++++.+
T Consensus 218 ~~~~~~~~ll~~ll~~~p~~R~~~~~~~ 245 (325)
T cd05604 218 GASLTAWSILEELLEKDRQRRLGAKEDF 245 (325)
T ss_pred CCCHHHHHHHHHHhccCHHhcCCCCCCH
Confidence 1234677899999999999999886433
No 138
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-40 Score=336.26 Aligned_cols=250 Identities=21% Similarity=0.241 Sum_probs=210.9
Q ss_pred HHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEE
Q 003296 554 EAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYL 632 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 632 (833)
.+.|..-++||+|+||.||-++. .+|+.+|.|++. +++....+.......|-.+|.+++.|.||.+-.+|++.+.+|+
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~-KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LCl 262 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLD-KKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCL 262 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHH-HHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEE
Confidence 45677789999999999999996 589999999994 5555556667788999999999999999999999999999999
Q ss_pred EEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCC
Q 003296 633 FYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDP 712 (833)
Q Consensus 633 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~ 712 (833)
||..|.||||.-+|.......+++.++..+|.+|+.||++|| ..+||.||+||+|||+|+.|+++|+|.|+|..+..
T Consensus 263 VLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH---~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~ 339 (591)
T KOG0986|consen 263 VLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLH---RRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPE 339 (591)
T ss_pred EEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHH---hcceeeccCChhheeeccCCCeEeeccceEEecCC
Confidence 999999999999998876678999999999999999999999 88999999999999999999999999999998865
Q ss_pred CCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHH--HHHhhcccccccccccccc
Q 003296 713 SKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKW--VLRNSAQQDKLDHILDFNV 790 (833)
Q Consensus 713 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 790 (833)
+.. ....+||.||||||++..+.|+..+|+||+||++|||+.|+.||....+-+.| +.+....
T Consensus 340 g~~---~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~------------ 404 (591)
T KOG0986|consen 340 GKP---IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLE------------ 404 (591)
T ss_pred CCc---cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhc------------
Confidence 553 24569999999999999999999999999999999999999999755444333 1111111
Q ss_pred cCCchhHHHHHHHHHHHHHhccCCCCCCCCCHH
Q 003296 791 SRTSLAVRSQMLTVLKVAVACVSVSPEARPKMK 823 (833)
Q Consensus 791 ~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~ 823 (833)
.+.......++++.++....|++||++|...+
T Consensus 405 -~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 405 -DPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred -chhhcccccCHHHHHHHHHHHccCHHHhccCC
Confidence 01111234556788899999999999997544
No 139
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=3.4e-39 Score=342.28 Aligned_cols=254 Identities=19% Similarity=0.210 Sum_probs=200.9
Q ss_pred cCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEe
Q 003296 557 ANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYE 635 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 635 (833)
|...+.||+|+||+||+|.. .+|+.||+|++.. .........+.+.+|++++++++|+||+++++++..++..++|||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~-~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEK-KRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeeh-hhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence 55668899999999999997 4799999999842 222222334568899999999999999999999999999999999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCC
Q 003296 636 YAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715 (833)
Q Consensus 636 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~ 715 (833)
|+++|+|.+++.......+++..+..++.|++.||.||| +.+|+||||||+||++++++.+|++|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH---~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~- 156 (285)
T cd05632 81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLH---RENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE- 156 (285)
T ss_pred eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCC-
Confidence 999999999987644456999999999999999999999 7899999999999999999999999999997654322
Q ss_pred CCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCch
Q 003296 716 TGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSL 795 (833)
Q Consensus 716 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (833)
......|+..|+|||++.+..++.++|||||||++|||++|+.||.+.............. ..... ...
T Consensus 157 --~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~-~~~~~----~~~---- 225 (285)
T cd05632 157 --SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRV-LETEE----VYS---- 225 (285)
T ss_pred --cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhh-hcccc----ccC----
Confidence 1234579999999999988889999999999999999999999997543321111100000 00000 000
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHH
Q 003296 796 AVRSQMLTVLKVAVACVSVSPEARPK-----MKSVLRM 828 (833)
Q Consensus 796 ~~~~~~~~~~~l~~~cl~~dP~~Rps-----~~evl~~ 828 (833)
.....++.+++.+|++.||++||+ ++|++.+
T Consensus 226 --~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 226 --AKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred --ccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 122345678999999999999999 6677654
No 140
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-40 Score=349.93 Aligned_cols=245 Identities=20% Similarity=0.263 Sum_probs=200.2
Q ss_pred cccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEeeCCC
Q 003296 561 NVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPK 639 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey~~~ 639 (833)
-++|+|.||+||-|++. +...+|||-+..+. ....+-...||.+.++++|.|||+++|.|..++.+-+.||-+||
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekd----sr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPG 656 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKD----SREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPG 656 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeeccccc----chhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCC
Confidence 47999999999999974 66789999994322 23345678899999999999999999999999999999999999
Q ss_pred CChhhhhhcCCCCCC--CHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeC-CCCCceeccceeeeeeCCCCCC
Q 003296 640 GTLFDVLHGCLENAL--DWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLK-SLKEPQIGDIELCKVIDPSKST 716 (833)
Q Consensus 640 g~L~~~l~~~~~~~l--~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~-~~~~~ki~dfgl~~~~~~~~~~ 716 (833)
|+|.++|+.. -+++ .+.+.-.+..||++||.||| ...|||||||-+|||++ -.|.+||+|||.++.+..-.
T Consensus 657 GSLSsLLrsk-WGPlKDNEstm~fYtkQILeGLkYLH---en~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgin-- 730 (1226)
T KOG4279|consen 657 GSLSSLLRSK-WGPLKDNESTMNFYTKQILEGLKYLH---ENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGIN-- 730 (1226)
T ss_pred CcHHHHHHhc-cCCCccchhHHHHHHHHHHHHhhhhh---hcceeeccccCCcEEEeeccceEEecccccchhhccCC--
Confidence 9999999853 3455 67788889999999999999 88899999999999997 57899999999999875332
Q ss_pred CccccccccccccccccccCC--cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCc
Q 003296 717 GSLSTVAGSVGYIPPEYAYTM--RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTS 794 (833)
Q Consensus 717 ~~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (833)
..+.++.||..|||||++..+ .|+.++|||||||++.||.||++||.+-.+...-+.....- +.-+
T Consensus 731 P~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmy------------KvHP 798 (1226)
T KOG4279|consen 731 PCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMY------------KVHP 798 (1226)
T ss_pred ccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcce------------ecCC
Confidence 245679999999999999754 48999999999999999999999998544432211111100 0112
Q ss_pred hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 003296 795 LAVRSQMLTVLKVAVACVSVSPEARPKMKSVLR 827 (833)
Q Consensus 795 ~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~ 827 (833)
+.+.+...++..++.+|+.+||.+||++++++.
T Consensus 799 ~iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 799 PIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred CCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 223466778899999999999999999999875
No 141
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=9e-39 Score=334.77 Aligned_cols=253 Identities=21% Similarity=0.278 Sum_probs=203.5
Q ss_pred HhcCCccccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
..|...+.||+|+||.||+|++.+...||+|++.... ...+.|.+|++++++++||||+++++++. ++..++||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-----~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~ 79 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVT 79 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-----cCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEE
Confidence 4578889999999999999998777789999994211 23467999999999999999999999874 46689999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
||+++|+|.+++.......++|..+..++.|+++||+|+| +.+|+||||||+||++++++.+|++|||.++......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~ 156 (262)
T cd05071 80 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 156 (262)
T ss_pred EcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcccEEEcCCCcEEeccCCceeeccccc
Confidence 9999999999998644456899999999999999999999 7899999999999999999999999999998764332
Q ss_pred CCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccccccCC
Q 003296 715 STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRT 793 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (833)
.. ......++..|+|||+..+..++.++|||||||++|||+| |+.||.+......+ ... ..... ..
T Consensus 157 ~~-~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~-~~~-~~~~~--------~~-- 223 (262)
T cd05071 157 YT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-DQV-ERGYR--------MP-- 223 (262)
T ss_pred cc-cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHH-HHH-hcCCC--------CC--
Confidence 21 1123456778999999988889999999999999999999 88888654322111 111 11000 00
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 003296 794 SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831 (833)
Q Consensus 794 ~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~ 831 (833)
.....+..+.+++.+|++.||++||++.++++.|++
T Consensus 224 --~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~ 259 (262)
T cd05071 224 --CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 259 (262)
T ss_pred --CccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence 011344578899999999999999999999999986
No 142
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=2.3e-39 Score=343.39 Aligned_cols=254 Identities=20% Similarity=0.218 Sum_probs=201.5
Q ss_pred cCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEe
Q 003296 557 ANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYE 635 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 635 (833)
|+..+.||+|+||.||+|... +++.||||.+... ........+.+.+|+.++++++|++|+++++++..++..++|||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~-~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKK-RIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehh-hccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 566789999999999999974 7899999998422 21122233567899999999999999999999999999999999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCC
Q 003296 636 YAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715 (833)
Q Consensus 636 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~ 715 (833)
|+++|+|.+++.......+++.++..++.|++.||.||| +.+|+||||||+||++++++.++++|||++.......
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 156 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLH---QERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ- 156 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc-
Confidence 999999999987544456899999999999999999999 7899999999999999999999999999987654322
Q ss_pred CCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCch
Q 003296 716 TGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSL 795 (833)
Q Consensus 716 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (833)
......||..|||||++.+..++.++|||||||++|||++|+.||........+....... .... ....
T Consensus 157 --~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~-~~~~----~~~~---- 225 (285)
T cd05630 157 --TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLV-KEVQ----EEYS---- 225 (285)
T ss_pred --cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhh-hhhh----hhcC----
Confidence 1134579999999999998889999999999999999999999997543211110000000 0000 0000
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHH
Q 003296 796 AVRSQMLTVLKVAVACVSVSPEARPK-----MKSVLRM 828 (833)
Q Consensus 796 ~~~~~~~~~~~l~~~cl~~dP~~Rps-----~~evl~~ 828 (833)
.....++.+++.+||+.||++||| ++|+++|
T Consensus 226 --~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 226 --EKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred --ccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 122346789999999999999999 8898874
No 143
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=4.9e-39 Score=338.01 Aligned_cols=259 Identities=17% Similarity=0.264 Sum_probs=207.4
Q ss_pred hcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
+|...+.||+|+||.||+|.. .+|..||||.+... ........++|.+|++++++++||||+++++++..++..++||
T Consensus 3 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~-~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIF-DLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred hhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeeh-hhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 567778999999999999996 58999999988422 1122233468999999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCC
Q 003296 635 EYAPKGTLFDVLHGC--LENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDP 712 (833)
Q Consensus 635 ey~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~ 712 (833)
||+++|+|.++++.. ....++|.++..++.|+++|++||| +.+++|+||||+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 999999999998742 2346899999999999999999999 78999999999999999999999999999876543
Q ss_pred CCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCcc-HHHHHHHhhccccccccccccccc
Q 003296 713 SKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNE-LAKWVLRNSAQQDKLDHILDFNVS 791 (833)
Q Consensus 713 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 791 (833)
... ......|+..|+|||+..+..++.++|||||||++|||++|..||.+... ...+..... ....+...
T Consensus 159 ~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-------~~~~~~~~ 229 (267)
T cd08229 159 KTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE-------QCDYPPLP 229 (267)
T ss_pred CCc--ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhh-------cCCCCCCC
Confidence 221 12345789999999999888899999999999999999999999964332 111111110 11011110
Q ss_pred CCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 792 RTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 792 ~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
......++.+++.+||+.||++||||.+|++.++++
T Consensus 230 -----~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 230 -----SDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred -----cccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 113455788999999999999999999999998864
No 144
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=3.4e-39 Score=344.15 Aligned_cols=260 Identities=21% Similarity=0.240 Sum_probs=204.8
Q ss_pred HHHhcCCccccccCcccEEEEEEcC------CCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEe
Q 003296 553 MEAVANPLNVELKTRFSTYYKAVMP------SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVL 625 (833)
Q Consensus 553 ~~~~~~~~~~ig~g~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~ 625 (833)
..++|+..+.||+|+||.||+|... ....||+|.+..... .....++.+|+++++++ +||||++++++|.
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 86 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT---EKDLSDLVSEMEMMKMIGKHKNIINLLGVCT 86 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC---HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEc
Confidence 3456788899999999999999863 236899999842211 12245689999999999 7999999999999
Q ss_pred cCCceEEEEeeCCCCChhhhhhcC--------------CCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccce
Q 003296 626 ASDSAYLFYEYAPKGTLFDVLHGC--------------LENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNI 691 (833)
Q Consensus 626 ~~~~~~lv~ey~~~g~L~~~l~~~--------------~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Ni 691 (833)
.++..++||||+++|+|.++++.. ....++|..++.++.|++.||+||| ..+|+||||||+||
T Consensus 87 ~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~Ni 163 (293)
T cd05053 87 QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA---SKKCIHRDLAARNV 163 (293)
T ss_pred CCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCccccccceeeE
Confidence 999999999999999999999642 1346899999999999999999999 78999999999999
Q ss_pred eeCCCCCceeccceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHH
Q 003296 692 FLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAK 770 (833)
Q Consensus 692 ll~~~~~~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~ 770 (833)
++++++.+|++|||+++...............++..|+|||+..+..++.++|||||||++|||++ |..||.......
T Consensus 164 l~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~- 242 (293)
T cd05053 164 LVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE- 242 (293)
T ss_pred EEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH-
Confidence 999999999999999987643322111222345678999999988889999999999999999998 999987543211
Q ss_pred HHHHhhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 771 WVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 771 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
... ......... .. ......+.+++.+||+.||++||||.|++++|+++
T Consensus 243 ~~~-~~~~~~~~~------~~------~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~ 291 (293)
T cd05053 243 LFK-LLKEGYRME------KP------QNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM 291 (293)
T ss_pred HHH-HHHcCCcCC------CC------CCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence 111 111111000 00 12234678999999999999999999999999875
No 145
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=8.4e-39 Score=336.16 Aligned_cols=261 Identities=18% Similarity=0.292 Sum_probs=210.2
Q ss_pred HhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
++|+..+.||+|+||.||+|... +|+.||+|.++.. ........+.+.+|++++++++|+||+++++++...+..++|
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv 80 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIF-EMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIV 80 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecc-cccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 46788899999999999999986 8999999988422 122223356899999999999999999999999999999999
Q ss_pred EeeCCCCChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeC
Q 003296 634 YEYAPKGTLFDVLHGCL--ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~ 711 (833)
|||+++|+|.+++.... ...+++.++..++.|+++|++||| +.+|+||||||+||+++.++.++++|||+++...
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~ 157 (267)
T cd08224 81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMH---SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecCCcChhhEEECCCCcEEEeccceeeecc
Confidence 99999999999986432 345899999999999999999999 7899999999999999999999999999988654
Q ss_pred CCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCc-cHHHHHHHhhcccccccccccccc
Q 003296 712 PSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGN-ELAKWVLRNSAQQDKLDHILDFNV 790 (833)
Q Consensus 712 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 790 (833)
.... ......|++.|+|||++.+..++.++|||||||++|||++|+.||.... .......... . .. .
T Consensus 158 ~~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~-~~--------~ 225 (267)
T cd08224 158 SKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE-K-CD--------Y 225 (267)
T ss_pred CCCc--ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhh-c-CC--------C
Confidence 3221 1234578999999999988889999999999999999999999996432 2222211111 0 00 0
Q ss_pred cCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhcC
Q 003296 791 SRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNAR 833 (833)
Q Consensus 791 ~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~r 833 (833)
... ........+.+++.+||..+|++|||+.+|+++|++++
T Consensus 226 ~~~--~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 226 PPL--PADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred CCC--ChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 000 01133457789999999999999999999999999874
No 146
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=9.3e-39 Score=334.42 Aligned_cols=253 Identities=22% Similarity=0.320 Sum_probs=203.7
Q ss_pred HhcCCccccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
++|+..+.||+|+||.||+|...++..||+|.+.... ...+.|.+|++++++++||||+++++++. ++..++||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~-----~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~ 79 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGT-----MSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVT 79 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCC-----CCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEE
Confidence 4677889999999999999998888899999984221 13467999999999999999999999875 56689999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
||+++|+|.+++++.....+++.++..++.|++.||+||| +.+|+||||||+||++++++.+|++|||++.......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05070 80 EYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNE 156 (260)
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEEeCCceEEeCCceeeeeccCcc
Confidence 9999999999998654556899999999999999999999 7889999999999999999999999999998764332
Q ss_pred CCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccccccCC
Q 003296 715 STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRT 793 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (833)
.. ......++..|+|||+..+..++.++|||||||++|||++ |+.||.+.... +........ ... ..
T Consensus 157 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~-~~~~~~~~~-~~~------~~--- 224 (260)
T cd05070 157 YT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR-EVLEQVERG-YRM------PC--- 224 (260)
T ss_pred cc-cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH-HHHHHHHcC-CCC------CC---
Confidence 11 1122345678999999988889999999999999999999 88999754322 111111110 000 00
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 003296 794 SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831 (833)
Q Consensus 794 ~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~ 831 (833)
....+..+.+++.+|++.+|++|||++++.+.|++
T Consensus 225 ---~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 225 ---PQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred ---CCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 11234568899999999999999999999999875
No 147
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=4e-39 Score=340.47 Aligned_cols=259 Identities=19% Similarity=0.249 Sum_probs=202.6
Q ss_pred HHHhcCCccccccCcccEEEEEEcC------CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEec
Q 003296 553 MEAVANPLNVELKTRFSTYYKAVMP------SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLA 626 (833)
Q Consensus 553 ~~~~~~~~~~ig~g~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~ 626 (833)
..+.|...+.||+|+||.||+|... .+..||+|.+..... ......|.+|+.++++++||||+++++++.+
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 80 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCS---EQDESDFLMEALIMSKFNHQNIVRLIGVSFE 80 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCC---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc
Confidence 3567888899999999999999974 467899998842211 1224579999999999999999999999999
Q ss_pred CCceEEEEeeCCCCChhhhhhcCCC-----CCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCC---C
Q 003296 627 SDSAYLFYEYAPKGTLFDVLHGCLE-----NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLK---E 698 (833)
Q Consensus 627 ~~~~~lv~ey~~~g~L~~~l~~~~~-----~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~---~ 698 (833)
.+..++||||+++|+|.++++.... ..++|.++..++.|++.|++||| ..+++||||||+||+++.++ .
T Consensus 81 ~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~nil~~~~~~~~~ 157 (277)
T cd05036 81 RLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE---ENHFIHRDIAARNCLLTCKGPGRV 157 (277)
T ss_pred CCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchheEEEeccCCCcc
Confidence 9999999999999999999975421 25899999999999999999999 78899999999999998654 5
Q ss_pred ceeccceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhc
Q 003296 699 PQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSA 777 (833)
Q Consensus 699 ~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~ 777 (833)
+|++|||+++...............++..|||||++.+..++.++|||||||++|||++ |+.||...... ........
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~-~~~~~~~~ 236 (277)
T cd05036 158 AKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ-EVMEFVTG 236 (277)
T ss_pred eEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHHc
Confidence 89999999987632221111122334578999999988889999999999999999997 99999754321 11111111
Q ss_pred ccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 003296 778 QQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831 (833)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~ 831 (833)
. ... .. ....+.++.+++.+|++.+|++||++.||+++|++
T Consensus 237 ~-~~~------~~------~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 237 G-GRL------DP------PKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred C-CcC------CC------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 1 100 00 01223567899999999999999999999999874
No 148
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=4.2e-39 Score=342.79 Aligned_cols=256 Identities=19% Similarity=0.220 Sum_probs=201.0
Q ss_pred cCCccccccCcccEEEEEEcC------CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCce
Q 003296 557 ANPLNVELKTRFSTYYKAVMP------SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSA 630 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~ 630 (833)
|...+.||+|+||.||+|+.. ....+|+|.+..... ....+++.+|++++++++|||||+++++|..++..
T Consensus 2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 78 (290)
T cd05045 2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS---SSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPL 78 (290)
T ss_pred ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCC---HHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCc
Confidence 566789999999999999852 235788888842211 12246799999999999999999999999999999
Q ss_pred EEEEeeCCCCChhhhhhcCC----------------------CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCc
Q 003296 631 YLFYEYAPKGTLFDVLHGCL----------------------ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLST 688 (833)
Q Consensus 631 ~lv~ey~~~g~L~~~l~~~~----------------------~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~ 688 (833)
++||||+++|+|.+++.... ...++|.+++.++.|++.||+||| ..+|+||||||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~ivH~dikp 155 (290)
T cd05045 79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA---EMKLVHRDLAA 155 (290)
T ss_pred EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHH---HCCeehhhhhh
Confidence 99999999999999986421 135889999999999999999999 78999999999
Q ss_pred cceeeCCCCCceeccceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCcc
Q 003296 689 RNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNE 767 (833)
Q Consensus 689 ~Nill~~~~~~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~ 767 (833)
+||++++++.+|++|||+++...............++..|+|||++.+..++.++|||||||++|||+| |+.||.+...
T Consensus 156 ~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~ 235 (290)
T cd05045 156 RNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP 235 (290)
T ss_pred heEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH
Confidence 999999999999999999986533222111223456778999999888889999999999999999999 9999965432
Q ss_pred HHHHHHHhhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 768 LAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
. .+... ...... .... ...+.++.+++.+||+.+|++||+++|+++.|+++
T Consensus 236 ~-~~~~~-~~~~~~------~~~~------~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~ 286 (290)
T cd05045 236 E-RLFNL-LKTGYR------MERP------ENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKM 286 (290)
T ss_pred H-HHHHH-HhCCCC------CCCC------CCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHH
Confidence 2 21111 111000 0000 12234688999999999999999999999999875
No 149
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=6.5e-39 Score=334.73 Aligned_cols=250 Identities=21% Similarity=0.254 Sum_probs=201.1
Q ss_pred hcCCccccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEe
Q 003296 556 VANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYE 635 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 635 (833)
+|...+.||+|+||.||+|...++..+|+|.+.... .....|.+|++++++++||||+++++++...+..++|||
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-----MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTE 79 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-----CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEe
Confidence 567788999999999999998878899999984221 234578999999999999999999999999999999999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCC
Q 003296 636 YAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715 (833)
Q Consensus 636 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~ 715 (833)
|+++|+|.++++... ..++|..+..++.|++.|++||| +.+|+||||||+||++++++.+|++|||+++.......
T Consensus 80 ~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~ 155 (256)
T cd05059 80 YMANGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLE---SNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY 155 (256)
T ss_pred cCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHhhEEECCCCcEEECCcccceecccccc
Confidence 999999999997532 36899999999999999999999 78899999999999999999999999999986542221
Q ss_pred CCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccccccCCc
Q 003296 716 TGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTS 794 (833)
Q Consensus 716 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (833)
.......++..|+|||++.+..++.++|||||||++|||++ |+.||........+ .... ... .....
T Consensus 156 -~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~-~~~~-~~~------~~~~~--- 223 (256)
T cd05059 156 -TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVV-ESVS-AGY------RLYRP--- 223 (256)
T ss_pred -cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHH-HHHH-cCC------cCCCC---
Confidence 11112234567999999998889999999999999999999 89999744332211 1111 100 00000
Q ss_pred hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 003296 795 LAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRML 829 (833)
Q Consensus 795 ~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L 829 (833)
...+.++.+++.+||..+|++||||.|+++.|
T Consensus 224 ---~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 224 ---KLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred ---CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 12345788999999999999999999999987
No 150
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.5e-40 Score=351.04 Aligned_cols=250 Identities=22% Similarity=0.303 Sum_probs=203.7
Q ss_pred CCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCc--eEEEE
Q 003296 558 NPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDS--AYLFY 634 (833)
Q Consensus 558 ~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~--~~lv~ 634 (833)
+...+||+|+|-+||||.+. +|..||--.++-.+........++|..|+++|+.|+|||||++|.+|.+... ..+|+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 34578999999999999984 7899986655322222333445889999999999999999999999998655 78899
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeC-CCCCceeccceeeeeeCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLK-SLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~-~~~~~ki~dfgl~~~~~~~ 713 (833)
|.|..|+|+.|.++ .+.++....+.|++||.+||.|||+. .+||||||||.+||+|+ ..|.+||+|.|+|......
T Consensus 123 EL~TSGtLr~Y~kk--~~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s 199 (632)
T KOG0584|consen 123 ELFTSGTLREYRKK--HRRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS 199 (632)
T ss_pred ecccCCcHHHHHHH--hccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhcc
Confidence 99999999999987 34578889999999999999999986 68999999999999997 5589999999999987543
Q ss_pred CCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCC
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRT 793 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (833)
.. ..++|||.|||||++. ..|++.+||||||+.++||+|+..||.+....++........ -+... +
T Consensus 200 ~a----ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SG-iKP~s-l------- 265 (632)
T KOG0584|consen 200 HA----KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSG-IKPAA-L------- 265 (632)
T ss_pred cc----ceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcC-CCHHH-h-------
Confidence 32 3489999999999876 789999999999999999999999999877766654433221 11100 0
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 794 SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 794 ~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
..-..+++.++|.+|+.. .++|||+.|++++
T Consensus 266 ---~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 266 ---SKVKDPEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred ---hccCCHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 011134788999999999 9999999999874
No 151
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-41 Score=352.02 Aligned_cols=347 Identities=21% Similarity=0.244 Sum_probs=240.9
Q ss_pred CCEEECCCCCCCCc--ccccCCCCCCEEECCCCCCCCcccccccCCCCCCEEeCcCCcCCCCCCcccCCCCCCCEEEccC
Q 003296 10 LKLLNFSKNELVSL--PTFNGFAGLEVLDFSSNNLNGNINLQFDELVSLKSLNLSKNKFNGFLPINLGKTKALEELVLSG 87 (833)
Q Consensus 10 L~~L~ls~N~l~~i--~~f~~l~~L~~L~Ls~N~l~~~~~~~f~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 87 (833)
-++||+|+|.|+.+ ..|.++++|+.+.|.+|.++.|+ .......+|+.|+|.+|.|+.+..+.+..++.|+.||||.
T Consensus 80 t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt~IP-~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSr 158 (873)
T KOG4194|consen 80 TQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELTRIP-RFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSR 158 (873)
T ss_pred eeeeeccccccccCcHHHHhcCCcceeeeeccchhhhcc-cccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhh
Confidence 35688888888886 24788888888888888888543 3333445688888888888888888888888888888888
Q ss_pred CcCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCcEEECcCCcCCCCCCcccccCCccCccccccccccccCC
Q 003296 88 NAFHGEIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQNKFSGSVP 167 (833)
Q Consensus 88 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p 167 (833)
|.|+.+.-.+|..=.++++|+|++|+|+.+-.+.|.++.+|.+|-|+.|+|+...+..|.++++|+.|+|..|++.-..-
T Consensus 159 N~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ 238 (873)
T KOG4194|consen 159 NLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEG 238 (873)
T ss_pred chhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehh
Confidence 88887766778877888888888888888888888888888888888888888888888888888888888888753222
Q ss_pred hhh--hhcCCEEecccccccccCCccCCCCCCCCEEecccccCcccCCCCCCcCCcEEEcCCccccCCCCccccCCCCCC
Q 003296 168 GGI--TRFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMSPNLVRLRLGTNLLIGEIPSATFTSLEKL 245 (833)
Q Consensus 168 ~~~--~~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~n~l~~~~~~~~f~~l~~L 245 (833)
..| +.+|+.|.|..|.+.......|..+.++++|+|+.|+++..- .+.+-++++|
T Consensus 239 ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn-----------------------~g~lfgLt~L 295 (873)
T KOG4194|consen 239 LTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVN-----------------------EGWLFGLTSL 295 (873)
T ss_pred hhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhh-----------------------cccccccchh
Confidence 222 445888888889888888888888899999999999887432 2233345555
Q ss_pred CEEECCCCCCCCCCCccccCCCCCcEEEccCCccCCCChhhhCCCCCCcEEEccCCcCCCcCchhhcCCCcCceeeccCC
Q 003296 246 TYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNGSLPIQLGSLGILQVMNLQLNKLSGEIPSQFSQLKLLSTMNISWN 325 (833)
Q Consensus 246 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 325 (833)
+.|+||+|.|..+.++++.-+++|++|+|++|+|+...+..|..+..|+.|+|++|+++..-...|..+++|+.|||++|
T Consensus 296 ~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N 375 (873)
T KOG4194|consen 296 EQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSN 375 (873)
T ss_pred hhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCC
Confidence 55555555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred cCcccCcc---ccccCCCCCEEEccCCccccccCccccCCCCCCEEEccCCcCCccCC
Q 003296 326 SLSGSIPS---FLSNLTNLVNLNLRQNNLNGSIPNSITNMRSLIELQLGGNQLSGTIP 380 (833)
Q Consensus 326 ~l~~~~~~---~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 380 (833)
.+++.+.+ .|.++++|+.|+|.+|++..+...+|.++.+|++|||.+|.|...-|
T Consensus 376 ~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~ 433 (873)
T KOG4194|consen 376 ELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQP 433 (873)
T ss_pred eEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecc
Confidence 55554433 34555555555555555554444555555555555555555544333
No 152
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.7e-39 Score=354.82 Aligned_cols=264 Identities=19% Similarity=0.191 Sum_probs=201.5
Q ss_pred HHHHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCC--
Q 003296 552 AMEAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD-- 628 (833)
Q Consensus 552 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~-- 628 (833)
...+.|...+.||+|+||.||+|.. .+|..||||++.... ......+.+.+|+.++++++||||+++++++...+
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 95 (359)
T cd07876 18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPF--QNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSL 95 (359)
T ss_pred hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccc--cchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCc
Confidence 3456788999999999999999997 478999999984221 12233567889999999999999999999987543
Q ss_pred ----ceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccc
Q 003296 629 ----SAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDI 704 (833)
Q Consensus 629 ----~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~df 704 (833)
..|+||||+++ +|.+.++. .+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 96 ~~~~~~~lv~e~~~~-~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH---~~~ivHrDlkp~NIl~~~~~~~kl~Df 167 (359)
T cd07876 96 EEFQDVYLVMELMDA-NLCQVIHM----ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDF 167 (359)
T ss_pred cccceeEEEEeCCCc-CHHHHHhc----cCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEecC
Confidence 47999999975 67776653 4788899999999999999999 789999999999999999999999999
Q ss_pred eeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccc
Q 003296 705 ELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDH 784 (833)
Q Consensus 705 gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 784 (833)
|+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.+......|.............
T Consensus 168 g~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 244 (359)
T cd07876 168 GLARTACTNF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAE 244 (359)
T ss_pred CCccccccCc---cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHH
Confidence 9997643222 2244678999999999999899999999999999999999999998665544432211111000000
Q ss_pred c-----------cc--cccc--------------CCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 785 I-----------LD--FNVS--------------RTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 785 ~-----------~~--~~~~--------------~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
. .. +... ...........++.+++.+||+.||++|||+.|+++|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 245 FMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0 00 0000 0000001123567899999999999999999999986
No 153
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=6.9e-39 Score=337.82 Aligned_cols=256 Identities=18% Similarity=0.207 Sum_probs=197.3
Q ss_pred CCccccccCcccEEEEEEcCC-Cc--eEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecC------C
Q 003296 558 NPLNVELKTRFSTYYKAVMPS-GM--SYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS------D 628 (833)
Q Consensus 558 ~~~~~ig~g~~g~vy~~~~~~-~~--~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~------~ 628 (833)
...+.||+|+||.||+|+..+ +. .||||.++... ......+.|.+|++++++++||||++++++|... .
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 79 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAI--CTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYP 79 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCc--CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCC
Confidence 356789999999999999753 33 68999884321 1122356799999999999999999999988542 2
Q ss_pred ceEEEEeeCCCCChhhhhhcC----CCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccc
Q 003296 629 SAYLFYEYAPKGTLFDVLHGC----LENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDI 704 (833)
Q Consensus 629 ~~~lv~ey~~~g~L~~~l~~~----~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~df 704 (833)
..++||||+++|+|.+++... ....++|.....++.|++.||+||| ..+|+||||||+||++++++.+|++||
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Df 156 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLS---SKSFIHRDLAARNCMLNENMNVCVADF 156 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhheEEcCCCCEEECCC
Confidence 478999999999999987422 1235899999999999999999999 789999999999999999999999999
Q ss_pred eeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhccccccc
Q 003296 705 ELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLD 783 (833)
Q Consensus 705 gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 783 (833)
|+++...............+++.|+|||+..+..++.++|||||||++|||++ |+.||...... +.... ........
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-~~~~~-~~~~~~~~ 234 (272)
T cd05075 157 GLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS-EIYDY-LRQGNRLK 234 (272)
T ss_pred CcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHH-HHcCCCCC
Confidence 99987643321111123356778999999988889999999999999999999 88998653322 21111 11111100
Q ss_pred ccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 784 HILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 784 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
.. ...+..+.+++.+||+.||++|||+.|++++|+++
T Consensus 235 --------~~----~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 235 --------QP----PDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred --------CC----CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 00 12234678999999999999999999999999875
No 154
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.4e-39 Score=364.45 Aligned_cols=260 Identities=16% Similarity=0.159 Sum_probs=194.2
Q ss_pred HHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecC-----
Q 003296 554 EAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS----- 627 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~----- 627 (833)
...|...+.||+|+||.||+|.. .+++.||||++... .....+|+.+|++++|||||++++++...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~--------~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~ 136 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD--------PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKN 136 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC--------cchHHHHHHHHHhcCCCCCcceeeeEeecccccC
Confidence 34688889999999999999997 47899999998321 13356799999999999999999987542
Q ss_pred ---CceEEEEeeCCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCC-Ccee
Q 003296 628 ---DSAYLFYEYAPKGTLFDVLHGC--LENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLK-EPQI 701 (833)
Q Consensus 628 ---~~~~lv~ey~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~-~~ki 701 (833)
...++||||+++ ++.+++... ....+++..+..++.|++.||+||| +.+|+||||||+|||++.++ .+||
T Consensus 137 ~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH---~~~IiHrDLKp~NILl~~~~~~vkL 212 (440)
T PTZ00036 137 EKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIH---SKFICHRDLKPQNLLIDPNTHTLKL 212 (440)
T ss_pred CCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCcCHHHEEEcCCCCceee
Confidence 246799999985 787776532 2346899999999999999999999 78999999999999999664 7999
Q ss_pred ccceeeeeeCCCCCCCccccccccccccccccccCC-cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccc
Q 003296 702 GDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTM-RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQD 780 (833)
Q Consensus 702 ~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 780 (833)
+|||+|+....... .....||+.|||||++.+. .|+.++|||||||++|||++|++||.+..............+.
T Consensus 213 ~DFGla~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~ 289 (440)
T PTZ00036 213 CDFGSAKNLLAGQR---SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGT 289 (440)
T ss_pred eccccchhccCCCC---cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Confidence 99999987643322 2346789999999988754 6899999999999999999999999865543322211111000
Q ss_pred cccc---cccc-----cccCC-chh-----HHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 781 KLDH---ILDF-----NVSRT-SLA-----VRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 781 ~~~~---~~~~-----~~~~~-~~~-----~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
...+ ...+ .++.. ... +...+.++.+++.+||+.||++|||+.|+++|
T Consensus 290 p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 290 PTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred CCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 0000 0000 00000 000 01124578899999999999999999999865
No 155
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=5.9e-40 Score=360.00 Aligned_cols=255 Identities=15% Similarity=0.203 Sum_probs=199.3
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
+|+..+.||+|+||.||+|... +|+.||||++.. .........+.+.+|++++.+++|||||++++++.+++..|+||
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~-~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRK-ADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEH-HHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 5778899999999999999974 789999999942 22222334567889999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
|||++|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+|++|||+++......
T Consensus 81 E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~~L~~lH---~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~ 155 (360)
T cd05627 81 EFLPGGDMMTLLMK--KDTLSEEATQFYIAETVLAIDAIH---QLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAH 155 (360)
T ss_pred eCCCCccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEeeccCCccccccc
Confidence 99999999999975 346899999999999999999999 8899999999999999999999999999987543211
Q ss_pred C---------------------------------CCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCc
Q 003296 715 S---------------------------------TGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTA 761 (833)
Q Consensus 715 ~---------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p 761 (833)
. .......+||+.|||||++.+..++.++|||||||++|||+||+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~P 235 (360)
T cd05627 156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (360)
T ss_pred ccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCC
Confidence 0 0011245799999999999998999999999999999999999999
Q ss_pred ccCCccHHHHHHHhhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCC---HHHHHHH
Q 003296 762 VNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPK---MKSVLRM 828 (833)
Q Consensus 762 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps---~~evl~~ 828 (833)
|.+......+.. ....... . .++.. .....++.+++.+|+. ||.+|++ +.|+++|
T Consensus 236 f~~~~~~~~~~~-i~~~~~~---~---~~p~~----~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 236 FCSETPQETYRK-VMNWKET---L---VFPPE----VPISEKAKDLILRFCT-DSENRIGSNGVEEIKSH 293 (360)
T ss_pred CCCCCHHHHHHH-HHcCCCc---e---ecCCC----CCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcC
Confidence 976543322211 1110000 0 00100 0123466788888764 9999985 6777765
No 156
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.8e-39 Score=375.37 Aligned_cols=260 Identities=18% Similarity=0.181 Sum_probs=201.3
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
.|+..+.||+|+||.||+|+.. +|+.||||++... ........++|.+|++++++++|||||++++++.+++..|+||
T Consensus 3 rYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~-l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 3 RYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIRED-LSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcc-cccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 5777899999999999999974 6899999999422 1111223467999999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCC---------CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccce
Q 003296 635 EYAPKGTLFDVLHGCL---------ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIE 705 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~---------~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfg 705 (833)
||+++|+|.++++... ....++..+..++.|+++||+||| +.+|+||||||+||+++.++.+|++|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLH---s~GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVH---SKGVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHH---HCCccccCCchheEEEcCCCCEEEEecC
Confidence 9999999999986421 124677888999999999999999 7899999999999999999999999999
Q ss_pred eeeeeCCCCC----------------CCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHH
Q 003296 706 LCKVIDPSKS----------------TGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELA 769 (833)
Q Consensus 706 l~~~~~~~~~----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~ 769 (833)
+++....... .......+||+.|||||++.+..++.++|||||||++|||+||+.||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 9987621110 001123579999999999999899999999999999999999999997533211
Q ss_pred HHHHHhhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCC-CHHHHHHHHHh
Q 003296 770 KWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARP-KMKSVLRMLLN 831 (833)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp-s~~evl~~L~~ 831 (833)
..... .+.++... ......+..+.+++.+|++.||++|| +++++.+.|+.
T Consensus 239 i~~~~---------~i~~P~~~---~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~ 289 (932)
T PRK13184 239 ISYRD---------VILSPIEV---APYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEP 289 (932)
T ss_pred hhhhh---------hccChhhc---cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 11000 00000000 00113345678899999999999995 66777776654
No 157
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.4e-39 Score=343.25 Aligned_cols=259 Identities=19% Similarity=0.249 Sum_probs=205.1
Q ss_pred HHhcCCccccccCcccEEEEEEc--------CCCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEE
Q 003296 554 EAVANPLNVELKTRFSTYYKAVM--------PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYV 624 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~ 624 (833)
..+|...+.||+|+||.||+|.. .++..||+|.+.... .....+++.+|+.+++++ +||||+++++++
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 90 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA---TEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 90 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc---chHHHHHHHHHHHHHHhhccCCCchheeEEE
Confidence 45677889999999999999973 134679999984221 122346799999999999 899999999999
Q ss_pred ecCCceEEEEeeCCCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccc
Q 003296 625 LASDSAYLFYEYAPKGTLFDVLHGCL--------------ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690 (833)
Q Consensus 625 ~~~~~~~lv~ey~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~N 690 (833)
..++..++||||+++|+|.+++.... ...++|.++..++.|+++||+||| +.+|+||||||+|
T Consensus 91 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~N 167 (304)
T cd05101 91 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA---SQKCIHRDLAARN 167 (304)
T ss_pred ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHH---HCCeeecccccce
Confidence 99999999999999999999997532 135789999999999999999999 7899999999999
Q ss_pred eeeCCCCCceeccceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHH
Q 003296 691 IFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELA 769 (833)
Q Consensus 691 ill~~~~~~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~ 769 (833)
|++++++.+|++|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |..||.+. ...
T Consensus 168 ili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~-~~~ 246 (304)
T cd05101 168 VLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVE 246 (304)
T ss_pred EEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC-CHH
Confidence 9999999999999999987643322222233456788999999988889999999999999999998 78888643 233
Q ss_pred HHHHHhhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 770 KWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
++..... ...... . ....+.++.+++.+||+.+|++||||.||++.|+++
T Consensus 247 ~~~~~~~-~~~~~~------~------~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~ 296 (304)
T cd05101 247 ELFKLLK-EGHRMD------K------PANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRI 296 (304)
T ss_pred HHHHHHH-cCCcCC------C------CCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHH
Confidence 3222211 111100 0 012345678899999999999999999999999864
No 158
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=6.9e-39 Score=339.17 Aligned_cols=256 Identities=21% Similarity=0.256 Sum_probs=202.5
Q ss_pred HhcCCccccccCcccEEEEEEc------CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCC
Q 003296 555 AVANPLNVELKTRFSTYYKAVM------PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD 628 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~ 628 (833)
.++.....+|+|+||.||+|.. .++..+|+|.+.... ....+.|.+|++++++++||||+++++++...+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS----ESARQDFQREAELLTVLQHQHIVRFYGVCTEGR 80 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC----HHHHHHHHHHHHHHhcCCCCCCceEEEEEecCC
Confidence 4566788999999999999963 246789999884221 123468999999999999999999999999999
Q ss_pred ceEEEEeeCCCCChhhhhhcCCC-------------CCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCC
Q 003296 629 SAYLFYEYAPKGTLFDVLHGCLE-------------NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKS 695 (833)
Q Consensus 629 ~~~lv~ey~~~g~L~~~l~~~~~-------------~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~ 695 (833)
..++||||+++|+|.++++.... ..++|.+++.++.|++.|++||| +.+|+||||||+||++++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~nil~~~ 157 (280)
T cd05092 81 PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLA---SLHFVHRDLATRNCLVGQ 157 (280)
T ss_pred ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHH---HCCeecccccHhhEEEcC
Confidence 99999999999999999975321 24899999999999999999999 789999999999999999
Q ss_pred CCCceeccceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHH
Q 003296 696 LKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLR 774 (833)
Q Consensus 696 ~~~~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~ 774 (833)
++.+|++|||+++...............+++.|+|||+..+..++.++|||||||++|||++ |+.||........ ...
T Consensus 158 ~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~-~~~ 236 (280)
T cd05092 158 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEA-IEC 236 (280)
T ss_pred CCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHH-HHH
Confidence 99999999999986543221111123446788999999998889999999999999999998 8999864432211 111
Q ss_pred hhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 003296 775 NSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831 (833)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~ 831 (833)
.. ..... .. ....+..+.+++.+||+.||++||+++||.+.|+.
T Consensus 237 ~~-~~~~~------~~------~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 237 IT-QGREL------ER------PRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred HH-cCccC------CC------CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 11 10000 00 01223467899999999999999999999999863
No 159
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=4e-39 Score=350.82 Aligned_cols=259 Identities=19% Similarity=0.251 Sum_probs=200.1
Q ss_pred HhcCCccccccCcccEEEEEEc------CCCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEecC
Q 003296 555 AVANPLNVELKTRFSTYYKAVM------PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVLAS 627 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~ 627 (833)
+.|+..+.||+|+||.||+|.. .+++.||||+++.... ....+.+.+|++++.++ +|||||+++++|...
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT---HSEHRALMSELKILIHIGHHLNVVNLLGACTKP 83 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC---hHHHHHHHHHHHHHHhccCCccHhhhcceeecC
Confidence 5688899999999999999973 3578999999942211 12245788999999999 689999999988765
Q ss_pred -CceEEEEeeCCCCChhhhhhcCC--------------------------------------------------------
Q 003296 628 -DSAYLFYEYAPKGTLFDVLHGCL-------------------------------------------------------- 650 (833)
Q Consensus 628 -~~~~lv~ey~~~g~L~~~l~~~~-------------------------------------------------------- 650 (833)
...++|||||++|+|.++++...
T Consensus 84 ~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (343)
T cd05103 84 GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 163 (343)
T ss_pred CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchh
Confidence 46799999999999999986421
Q ss_pred ---------CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCcccc
Q 003296 651 ---------ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLST 721 (833)
Q Consensus 651 ---------~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~~~~ 721 (833)
...++|.++..++.|+++||+||| +.+|+||||||+||++++++.+|++|||+++.............
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 240 (343)
T cd05103 164 EEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGD 240 (343)
T ss_pred hhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCC
Confidence 123688889999999999999999 78999999999999999999999999999986533221111223
Q ss_pred ccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccccccCCchhHHHH
Q 003296 722 VAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQ 800 (833)
Q Consensus 722 ~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (833)
..++..|+|||++.+..++.++|||||||++|||++ |..||.......... ......... ..+. ..
T Consensus 241 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~-~~~~~~~~~------~~~~------~~ 307 (343)
T cd05103 241 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC-RRLKEGTRM------RAPD------YT 307 (343)
T ss_pred CCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHH-HHHhccCCC------CCCC------CC
Confidence 446778999999988889999999999999999997 999986432211111 111111100 0000 11
Q ss_pred HHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 801 MLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 801 ~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
..++.+++.+||+.||++|||+.||+++|+.+
T Consensus 308 ~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~ 339 (343)
T cd05103 308 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 339 (343)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 24678999999999999999999999999874
No 160
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-40 Score=309.89 Aligned_cols=261 Identities=19% Similarity=0.244 Sum_probs=205.4
Q ss_pred HhcCCccccccCcccEEEEEE-cCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCC-----
Q 003296 555 AVANPLNVELKTRFSTYYKAV-MPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD----- 628 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~----- 628 (833)
+.|.+.+.+|+|+|+.||.++ ..++..||+|++.- ....+.+...+|++..++++||||+++++++..+.
T Consensus 21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c----~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~ 96 (302)
T KOG2345|consen 21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILC----HSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKH 96 (302)
T ss_pred ceEEEeeeecCCCceeeeeecccCcccchhhheeec----cchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCce
Confidence 457888999999999999999 57899999999942 22345678999999999999999999999987544
Q ss_pred ceEEEEeeCCCCChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceecccee
Q 003296 629 SAYLFYEYAPKGTLFDVLHGCL--ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIEL 706 (833)
Q Consensus 629 ~~~lv~ey~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl 706 (833)
+.||++.|...|+|.+.+.... +..+++.+.+.|+.++++||.+||+. .++..||||||.|||+.+++.+++.|||.
T Consensus 97 ~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS 175 (302)
T KOG2345|consen 97 EAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGS 175 (302)
T ss_pred eEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccC
Confidence 4999999999999999998543 34799999999999999999999965 35799999999999999999999999998
Q ss_pred eeeeCCCCCC-------CccccccccccccccccccC---CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhh
Q 003296 707 CKVIDPSKST-------GSLSTVAGSVGYIPPEYAYT---MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNS 776 (833)
Q Consensus 707 ~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 776 (833)
+....-.-.. +.......|..|.|||.+.. ...++++|||||||++|+|+.|..||+.. .
T Consensus 176 ~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~----------~ 245 (302)
T KOG2345|consen 176 ATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERI----------Y 245 (302)
T ss_pred ccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHH----------h
Confidence 8654311100 01112346889999998864 34689999999999999999999999721 1
Q ss_pred ccccccc-ccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 777 AQQDKLD-HILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 777 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
.+++.+. .+..+.+..+... ..+..+.+++..|++.||.+||++.|++.+++.+
T Consensus 246 ~~GgSlaLAv~n~q~s~P~~~--~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 246 QQGGSLALAVQNAQISIPNSS--RYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred hcCCeEEEeeeccccccCCCC--CccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 1222221 2222233222211 2566888999999999999999999999998753
No 161
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=6.4e-39 Score=338.11 Aligned_cols=254 Identities=16% Similarity=0.271 Sum_probs=202.2
Q ss_pred HHHHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEecC--
Q 003296 552 AMEAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVLAS-- 627 (833)
Q Consensus 552 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~-- 627 (833)
.++..|+..+.||+|+||.||+|.. .+++.||+|++... ......+.+|+++++++ +||||++++++|...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~-----~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~ 77 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-----GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNP 77 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcC-----CccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCC
Confidence 3556778888999999999999997 47899999998422 12346789999999999 699999999998753
Q ss_pred ----CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceecc
Q 003296 628 ----DSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGD 703 (833)
Q Consensus 628 ----~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~d 703 (833)
+..|+||||+++|+|.+++.......++|..+..++.|++.|++||| +.+|+|||+||+||++++++.+|++|
T Consensus 78 ~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH---~~~ivh~dl~~~nili~~~~~~~l~D 154 (272)
T cd06637 78 PGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVD 154 (272)
T ss_pred CCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHEEECCCCCEEEcc
Confidence 45899999999999999998654557899999999999999999999 78899999999999999999999999
Q ss_pred ceeeeeeCCCCCCCcccccccccccccccccc-----CCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcc
Q 003296 704 IELCKVIDPSKSTGSLSTVAGSVGYIPPEYAY-----TMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQ 778 (833)
Q Consensus 704 fgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 778 (833)
||+++....... ......|++.|+|||++. ...++.++|||||||++|||++|+.||........+.....
T Consensus 155 fg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~-- 230 (272)
T cd06637 155 FGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR-- 230 (272)
T ss_pred CCCceecccccc--cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhc--
Confidence 999986543221 224567999999999886 33588899999999999999999999975443322221110
Q ss_pred cccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 779 QDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.......+ ...+.++.+++.+||+.||.+|||+.|++++
T Consensus 231 -~~~~~~~~----------~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 231 -NPAPRLKS----------KKWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred -CCCCCCCC----------CCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 00011100 1223467899999999999999999999875
No 162
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=7.2e-39 Score=342.17 Aligned_cols=263 Identities=18% Similarity=0.223 Sum_probs=204.1
Q ss_pred HHhcCCccccccCcccEEEEEEcCC-----------------CceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCC
Q 003296 554 EAVANPLNVELKTRFSTYYKAVMPS-----------------GMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSN 616 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n 616 (833)
...|+..+.||+|+||.||+|.... +..||+|++..... ....++|.+|++++++++|||
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~~e~~~l~~l~~~~ 80 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS---DNAREDFLKEVKILSRLSDPN 80 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccC---HHHHHHHHHHHHHHHhcCCCC
Confidence 3567888999999999999998642 24689999842211 123568999999999999999
Q ss_pred cccceEEEecCCceEEEEeeCCCCChhhhhhcCC---------CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCC
Q 003296 617 VMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCL---------ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLS 687 (833)
Q Consensus 617 iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~---------~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk 687 (833)
|++++++|..++..++||||+++|+|.+++.... ...+++..++.++.|++.||+||| +.+|+|||||
T Consensus 81 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH---~~~i~H~dlk 157 (296)
T cd05051 81 IARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLE---SLNFVHRDLA 157 (296)
T ss_pred EeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHH---HcCccccccc
Confidence 9999999999999999999999999999997642 125899999999999999999999 7889999999
Q ss_pred ccceeeCCCCCceeccceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh--CCCcccCC
Q 003296 688 TRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT--GKTAVNQG 765 (833)
Q Consensus 688 ~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt--g~~p~~~~ 765 (833)
|+||+++.++.+|++|||+++...............+++.|||||++.+..++.++|||||||++|||++ |..||...
T Consensus 158 p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~ 237 (296)
T cd05051 158 TRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHL 237 (296)
T ss_pred hhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCc
Confidence 9999999999999999999986543322222234567889999999988889999999999999999998 67788643
Q ss_pred ccHHHHH--HHhhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 003296 766 NELAKWV--LRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831 (833)
Q Consensus 766 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~ 831 (833)
.....+. ......... ..... .....+.++.+++.+|++.||++|||+.||++.|++
T Consensus 238 ~~~~~~~~~~~~~~~~~~-~~~~~--------~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 238 TDQQVIENAGHFFRDDGR-QIYLP--------RPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred ChHHHHHHHHhccccccc-cccCC--------CccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 3222111 110000000 00000 011223578899999999999999999999999874
No 163
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=2.6e-39 Score=356.64 Aligned_cols=264 Identities=20% Similarity=0.219 Sum_probs=200.2
Q ss_pred hcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCC-----c
Q 003296 556 VANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD-----S 629 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~-----~ 629 (833)
+|+..+.||+|+||.||+|.. .+|+.||||++.... ......+++.+|+++++.++|||||++++++..++ .
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 78 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVF--QNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEE 78 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccc--cchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccce
Confidence 367788999999999999997 479999999984221 11223467899999999999999999999998776 7
Q ss_pred eEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeee
Q 003296 630 AYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKV 709 (833)
Q Consensus 630 ~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~ 709 (833)
.|+||||+. ++|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.
T Consensus 79 ~~lv~e~~~-~~l~~~~~~--~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~ 152 (372)
T cd07853 79 IYVVTELMQ-SDLHKIIVS--PQPLSSDHVKVFLYQILRGLKYLH---SAGILHRDIKPGNLLVNSNCVLKICDFGLARV 152 (372)
T ss_pred EEEEeeccc-cCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHHEEECCCCCEEeccccceee
Confidence 899999996 588888865 346899999999999999999999 78999999999999999999999999999987
Q ss_pred eCCCCCCCccccccccccccccccccCC-cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccc-ccccc---
Q 003296 710 IDPSKSTGSLSTVAGSVGYIPPEYAYTM-RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQ-DKLDH--- 784 (833)
Q Consensus 710 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~-~~~~~--- 784 (833)
...... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||.+..............+ .....
T Consensus 153 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~ 231 (372)
T cd07853 153 EEPDES-KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRS 231 (372)
T ss_pred cccCcc-ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHH
Confidence 643322 122345789999999998764 478999999999999999999999976543322211100000 00000
Q ss_pred --------cccccccCCc-----hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 785 --------ILDFNVSRTS-----LAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 785 --------~~~~~~~~~~-----~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
+.......+. ........++.+++.+|++.||++|||+.|+++|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 232 ACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred hhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 0000000000 0001124578899999999999999999999875
No 164
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=6.4e-39 Score=342.16 Aligned_cols=262 Identities=18% Similarity=0.199 Sum_probs=200.2
Q ss_pred HhcCCccccccCcccEEEEEEcCC---------------CceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCccc
Q 003296 555 AVANPLNVELKTRFSTYYKAVMPS---------------GMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMT 619 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~~---------------~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~ 619 (833)
..|+..+.||+|+||.||+|+... ...||||++.... .......|.+|++++++++||||++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~ei~~l~~l~h~~i~~ 81 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV---TKTARNDFLKEIKIMSRLKNPNIIR 81 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC---CHHHHHHHHHHHHHHHhCCCCCcCe
Confidence 567888999999999999997632 2358999984221 1123457999999999999999999
Q ss_pred ceEEEecCCceEEEEeeCCCCChhhhhhcCC----------CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCcc
Q 003296 620 PLAYVLASDSAYLFYEYAPKGTLFDVLHGCL----------ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTR 689 (833)
Q Consensus 620 ~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~----------~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~ 689 (833)
+++++...+..++||||+++|+|.+++.... ...++|.+++.++.|+++||+||| ..+++||||||+
T Consensus 82 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~ 158 (295)
T cd05097 82 LLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA---SLNFVHRDLATR 158 (295)
T ss_pred EEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHH---hcCeeccccChh
Confidence 9999999999999999999999999986431 124789999999999999999999 789999999999
Q ss_pred ceeeCCCCCceeccceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh--CCCcccCCcc
Q 003296 690 NIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT--GKTAVNQGNE 767 (833)
Q Consensus 690 Nill~~~~~~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt--g~~p~~~~~~ 767 (833)
||++++++.+|++|||+++...............++..|+|||+..+..++.++|||||||++|||++ |..||.....
T Consensus 159 Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~ 238 (295)
T cd05097 159 NCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSD 238 (295)
T ss_pred hEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccCh
Confidence 99999999999999999976543322111223456789999999988889999999999999999998 5677764322
Q ss_pred HH--HHHHHhhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 003296 768 LA--KWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831 (833)
Q Consensus 768 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~ 831 (833)
.. ................. . ....+..+.+++.+||+.||++||+|.+|++.|++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~---~------~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 239 EQVIENTGEFFRNQGRQIYLS---Q------TPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred HHHHHHHHHhhhhccccccCC---C------CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 11 11111000000000000 0 00123478899999999999999999999999874
No 165
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=5.2e-39 Score=337.80 Aligned_cols=255 Identities=16% Similarity=0.215 Sum_probs=201.8
Q ss_pred HHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEE
Q 003296 554 EAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYL 632 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 632 (833)
..+|+..+.||+|+||.||+|+. .+|+.||+|++.... ....+.+.+|+.++++++||||+++++++..++..++
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~i 83 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP----GDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWI 83 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc----cchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEE
Confidence 35688889999999999999996 578999999984221 1224568899999999999999999999999999999
Q ss_pred EEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCC
Q 003296 633 FYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDP 712 (833)
Q Consensus 633 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~ 712 (833)
||||+++|+|.++++. ...+++..+..++.|++.|+.||| ..+|+|||+||+||++++++.+|++|||+++....
T Consensus 84 v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06646 84 CMEYCGGGSLQDIYHV--TGPLSELQIAYVCRETLQGLAYLH---SKGKMHRDIKGANILLTDNGDVKLADFGVAAKITA 158 (267)
T ss_pred EEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEECcCccceeecc
Confidence 9999999999999875 346899999999999999999999 78999999999999999999999999999987643
Q ss_pred CCCCCcccccccccccccccccc---CCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccccccccc
Q 003296 713 SKSTGSLSTVAGSVGYIPPEYAY---TMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFN 789 (833)
Q Consensus 713 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (833)
... ......|++.|+|||.+. ...++.++|||||||++|||++|+.||.......... ...... ...+.
T Consensus 159 ~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~---~~~~~~---~~~~~ 230 (267)
T cd06646 159 TIA--KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF---LMSKSN---FQPPK 230 (267)
T ss_pred ccc--ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe---eeecCC---CCCCC
Confidence 221 123457899999999874 3457889999999999999999999986432211100 000000 00000
Q ss_pred ccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 003296 790 VSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRML 829 (833)
Q Consensus 790 ~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L 829 (833)
.. .....+.++.+++.+||+.||++|||++++++++
T Consensus 231 ~~----~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 231 LK----DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred Cc----cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 10 0112345788999999999999999999999875
No 166
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1e-38 Score=337.82 Aligned_cols=257 Identities=21% Similarity=0.304 Sum_probs=201.5
Q ss_pred HHhcCCccccccCcccEEEEEEc-CCCc----eEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCC
Q 003296 554 EAVANPLNVELKTRFSTYYKAVM-PSGM----SYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD 628 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~ 628 (833)
.++|+..+.||+|+||.||+|.. ++|. .||+|+++.... ....+++.+|+.++++++||||++++++|.. .
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~ 81 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTS---PKANKEILDEAYVMAGVGSPYVCRLLGICLT-S 81 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCC---HHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-C
Confidence 45678889999999999999985 4554 489999842211 1234678999999999999999999999975 4
Q ss_pred ceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeee
Q 003296 629 SAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCK 708 (833)
Q Consensus 629 ~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~ 708 (833)
..+++|||+++|+|.++++.. ...+++.+++.++.|++.||+||| +.+|+||||||+||++++++.+|++|||+++
T Consensus 82 ~~~l~~~~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~lH---~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~ 157 (279)
T cd05109 82 TVQLVTQLMPYGCLLDYVREN-KDRIGSQDLLNWCVQIAKGMSYLE---EVRLVHRDLAARNVLVKSPNHVKITDFGLAR 157 (279)
T ss_pred CcEEEEEcCCCCCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEcCCCcEEECCCCcee
Confidence 578999999999999999753 346899999999999999999999 7899999999999999999999999999998
Q ss_pred eeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhccccccccccc
Q 003296 709 VIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILD 787 (833)
Q Consensus 709 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (833)
...............+++.|||||+..+..++.++|||||||++|||++ |..||....... .. ..........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-~~-~~~~~~~~~~---- 231 (279)
T cd05109 158 LLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE-IP-DLLEKGERLP---- 231 (279)
T ss_pred ecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH-HH-HHHHCCCcCC----
Confidence 7753322211122345678999999988889999999999999999998 899986432211 11 0111111000
Q ss_pred ccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 788 FNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
. ....+.++.+++.+||+.||++||++.|+++.|+++
T Consensus 232 --~------~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~ 268 (279)
T cd05109 232 --Q------PPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRM 268 (279)
T ss_pred --C------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence 0 012345678999999999999999999999998875
No 167
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-40 Score=347.45 Aligned_cols=250 Identities=16% Similarity=0.219 Sum_probs=203.9
Q ss_pred cCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEe
Q 003296 557 ANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYE 635 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 635 (833)
+++...+|.|+||.||||+.+ ++...|.|++.. ......++|.-||+||+.++||+||++++.|+.++.+|+..|
T Consensus 34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIet----kseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliE 109 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIET----KSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIE 109 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcccchhhhhhhhhcc----cchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEe
Confidence 345567899999999999975 556677788832 223446789999999999999999999999999999999999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCC
Q 003296 636 YAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715 (833)
Q Consensus 636 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~ 715 (833)
||.||-...++-.- +..+.+.++..++.|++.||.||| +..|||||+|..|||++-+|.+|++|||++.......
T Consensus 110 FC~GGAVDaimlEL-~r~LtE~QIqvvc~q~ldALn~LH---s~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~- 184 (1187)
T KOG0579|consen 110 FCGGGAVDAIMLEL-GRVLTEDQIQVVCYQVLDALNWLH---SQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTR- 184 (1187)
T ss_pred ecCCchHhHHHHHh-ccccchHHHHHHHHHHHHHHHHHh---hcchhhhhccccceEEEecCcEeeecccccccchhHH-
Confidence 99999998887653 457999999999999999999999 8899999999999999999999999999875432211
Q ss_pred CCcccccccccccccccccc-----CCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccc
Q 003296 716 TGSLSTVAGSVGYIPPEYAY-----TMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNV 790 (833)
Q Consensus 716 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (833)
....++.|||+|||||+.. ..+|++++||||||++|.||.-+.+|..+-+.+...+.....+.. .+
T Consensus 185 -qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePP--------TL 255 (1187)
T KOG0579|consen 185 -QKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPP--------TL 255 (1187)
T ss_pred -hhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCC--------cc
Confidence 1235689999999999875 457999999999999999999999999876655444333222211 11
Q ss_pred cCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 791 SRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 791 ~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
..+......+.+++.+||.++|..||++.++++|
T Consensus 256 ----lqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 256 ----LQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred ----cCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 1123456678899999999999999999999876
No 168
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=9.2e-39 Score=333.80 Aligned_cols=248 Identities=18% Similarity=0.242 Sum_probs=196.4
Q ss_pred ccccCcccEEEEEEc---CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEeeCC
Q 003296 562 VELKTRFSTYYKAVM---PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAP 638 (833)
Q Consensus 562 ~ig~g~~g~vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey~~ 638 (833)
.||+|+||.||+|++ +++..||+|+++.... .....++|.+|+.++++++||||+++++++. .+..++||||++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~ 78 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNN--DPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAE 78 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCC--cHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCC
Confidence 589999999999975 3678999999842221 1223568999999999999999999999885 456799999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCC-C
Q 003296 639 KGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKST-G 717 (833)
Q Consensus 639 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~-~ 717 (833)
+|+|.+++.. ...+++..+..++.|++.|++|+| +.+|+||||||+||++++++.+|++|||+++........ .
T Consensus 79 ~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 153 (257)
T cd05116 79 LGPLNKFLQK--NKHVTEKNITELVHQVSMGMKYLE---ETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK 153 (257)
T ss_pred CCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeee
Confidence 9999999975 346899999999999999999999 789999999999999999999999999999876433211 1
Q ss_pred ccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccccccCCchh
Q 003296 718 SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLA 796 (833)
Q Consensus 718 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (833)
......++..|+|||.+....++.++|||||||++|||++ |+.||...... .+..... ..... ..+
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-~~~~~i~-~~~~~------~~~----- 220 (257)
T cd05116 154 AKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN-EVTQMIE-SGERM------ECP----- 220 (257)
T ss_pred ecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHH-CCCCC------CCC-----
Confidence 1122345679999999888889999999999999999998 99999754332 2222111 11110 011
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 003296 797 VRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831 (833)
Q Consensus 797 ~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~ 831 (833)
...+.++.+++.+||+.||++||++++|.++|++
T Consensus 221 -~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 221 -QRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred -CCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 1234567899999999999999999999999986
No 169
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1.4e-38 Score=334.93 Aligned_cols=254 Identities=22% Similarity=0.240 Sum_probs=192.3
Q ss_pred cccccCcccEEEEEEcC---CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEeeC
Q 003296 561 NVELKTRFSTYYKAVMP---SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYA 637 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey~ 637 (833)
+.||+|+||.||+|+.. ++..+|+|+++.... ......|.+|+.++++++|||||++++++.+....++||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 77 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS---VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFC 77 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC---hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECC
Confidence 36899999999999863 356799999842221 122357899999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCC---CCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 638 PKGTLFDVLHGCLE---NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 638 ~~g~L~~~l~~~~~---~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
++|+|.++++.... ...++..+..++.|+++|++||| +.+++||||||+||+++.++.+|++|||+++......
T Consensus 78 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~ 154 (269)
T cd05087 78 PLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH---KNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKED 154 (269)
T ss_pred CCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEECCccccccccCcc
Confidence 99999999975322 24678888899999999999999 7889999999999999999999999999987543222
Q ss_pred CCCccccccccccccccccccCC-------cccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccc
Q 003296 715 STGSLSTVAGSVGYIPPEYAYTM-------RVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHIL 786 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (833)
.........|+..|+|||++.+. .++.++|||||||++|||++ |+.||............... ......
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~---~~~~~~ 231 (269)
T cd05087 155 YYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVRE---QQLKLP 231 (269)
T ss_pred eeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhc---ccCCCC
Confidence 11112235678899999987532 35789999999999999996 99999754332222111111 111111
Q ss_pred cccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 003296 787 DFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLL 830 (833)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~ 830 (833)
++.... .....+.+++.+|+ .+|++|||++||++.|+
T Consensus 232 ~~~~~~------~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 232 KPRLKL------PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCccCC------CCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 111111 12335677889998 68999999999999875
No 170
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=2e-38 Score=331.96 Aligned_cols=254 Identities=19% Similarity=0.275 Sum_probs=205.5
Q ss_pred HHhcCCccccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 554 EAVANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
.++|...+.||+|+||.||+|..++++.||+|.+.... ....+|.+|+.++++++||||+++++++ .++..++|
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v 78 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-----MSPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYII 78 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-----CcHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEE
Confidence 45788889999999999999999899999999984221 2346799999999999999999999986 45678999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
|||+++|+|.+++.......+++.++..++.|++.||+||| +.+++||||||+||++++++.++++|||++......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05067 79 TEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIE---RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDN 155 (260)
T ss_pred EEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHHhEEEcCCCCEEEccCcceeecCCC
Confidence 99999999999997654557899999999999999999999 788999999999999999999999999999876422
Q ss_pred CCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccccccC
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSR 792 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 792 (833)
... ......++..|+|||++.+..++.++|||||||++||+++ |+.||.+.... +...... ..... ...
T Consensus 156 ~~~-~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-~~~~~~~-~~~~~------~~~- 225 (260)
T cd05067 156 EYT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP-EVIQNLE-RGYRM------PRP- 225 (260)
T ss_pred Ccc-cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH-HHHHHHH-cCCCC------CCC-
Confidence 211 1123456788999999988889999999999999999999 99999754322 1111111 10000 000
Q ss_pred CchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 003296 793 TSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831 (833)
Q Consensus 793 ~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~ 831 (833)
...+.++.+++.+|++.+|++||+++++...|+.
T Consensus 226 -----~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 226 -----DNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred -----CCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 1123468899999999999999999999999975
No 171
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=5.6e-39 Score=344.94 Aligned_cols=264 Identities=16% Similarity=0.238 Sum_probs=200.0
Q ss_pred HhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
+.|...+.||+|+||.||+|+.. ++..||+|+++... .......+.+|++++++++||||+++++++..++..++|
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 82 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEH---EEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLV 82 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccc---cCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEE
Confidence 35777889999999999999975 78899999984221 122345688999999999999999999999999999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
|||+++ +|.+++... ...+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 83 ~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 157 (309)
T cd07872 83 FEYLDK-DLKQYMDDC-GNIMSMHNVKIFLYQILRGLAYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSVP 157 (309)
T ss_pred EeCCCC-CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECccccceecCCC
Confidence 999975 898888753 345889999999999999999999 789999999999999999999999999999765332
Q ss_pred CCCCccccccccccccccccccC-CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHH--Hhhccc--cccccc---
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVL--RNSAQQ--DKLDHI--- 785 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~--~~~~~~--~~~~~~--- 785 (833)
.. ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||.+......... ...... .....+
T Consensus 158 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (309)
T cd07872 158 TK--TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSN 235 (309)
T ss_pred cc--ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcch
Confidence 21 1234568999999998865 4588999999999999999999999975443222111 110000 000000
Q ss_pred ---ccccccCC-----chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 786 ---LDFNVSRT-----SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 786 ---~~~~~~~~-----~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.+...... .........++.+++.+|++.||++|||++|+++|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 236 DEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred hhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 00000000 00001234567899999999999999999999875
No 172
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=6.8e-39 Score=340.91 Aligned_cols=263 Identities=19% Similarity=0.209 Sum_probs=197.6
Q ss_pred cCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcC---CCCCcccceEEEecC-----
Q 003296 557 ANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL---SNSNVMTPLAYVLAS----- 627 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l---~H~niv~~~~~~~~~----- 627 (833)
|+..+.||+|+||.||+|... +|+.||+|.++... ........+.+|+++++++ +||||+++++++...
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQT--NEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCc--CCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 667789999999999999974 78999999984321 1122334577888887766 699999999998652
Q ss_pred CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceee
Q 003296 628 DSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELC 707 (833)
Q Consensus 628 ~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~ 707 (833)
...++||||++ ++|.+++.......+++..+..++.|++.||+||| +.+|+||||||+||++++++.+|++|||++
T Consensus 80 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~kl~dfg~~ 155 (288)
T cd07863 80 TKVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGQVKLADFGLA 155 (288)
T ss_pred ceEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccCcc
Confidence 45899999997 49999987654456899999999999999999999 788999999999999999999999999999
Q ss_pred eeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhh--cc--ccccc
Q 003296 708 KVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNS--AQ--QDKLD 783 (833)
Q Consensus 708 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~--~~--~~~~~ 783 (833)
+...... ......||..|+|||++.+..++.++||||+||++|||++|++||.+............ .. .....
T Consensus 156 ~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07863 156 RIYSCQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 232 (288)
T ss_pred ccccCcc---cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCc
Confidence 8764322 12346789999999999888899999999999999999999999975543322111110 00 00000
Q ss_pred -------ccccccccCC-chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 784 -------HILDFNVSRT-SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 784 -------~~~~~~~~~~-~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
....+..... .........++.+++.+|++.||++|||+.|++.|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 233 RDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred ccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000000000 00011234567899999999999999999999865
No 173
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=8.1e-39 Score=338.81 Aligned_cols=259 Identities=20% Similarity=0.282 Sum_probs=205.7
Q ss_pred HHhcCCccccccCcccEEEEEEcCC-----CceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEec-C
Q 003296 554 EAVANPLNVELKTRFSTYYKAVMPS-----GMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLA-S 627 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~-~ 627 (833)
.++|...++||+|+||.||+|.... +..||+|++.... .....+.+.+|+.++++++||||+++++++.. +
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~ 81 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA---SEIQVTLLLQESCLLYGLSHQNILPILHVCIEDG 81 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence 4567888999999999999999754 7889999984221 12234678999999999999999999999876 4
Q ss_pred CceEEEEeeCCCCChhhhhhcCCC------CCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCcee
Q 003296 628 DSAYLFYEYAPKGTLFDVLHGCLE------NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQI 701 (833)
Q Consensus 628 ~~~~lv~ey~~~g~L~~~l~~~~~------~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki 701 (833)
...++++||+++|+|.+++..... ..++|.++..++.|++.||+||| +.+++||||||+||++++++.+|+
T Consensus 82 ~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kl 158 (280)
T cd05043 82 EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH---KRGVIHKDIAARNCVIDEELQVKI 158 (280)
T ss_pred CCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCHhhEEEcCCCcEEE
Confidence 778999999999999999975322 45899999999999999999999 789999999999999999999999
Q ss_pred ccceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccc
Q 003296 702 GDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQD 780 (833)
Q Consensus 702 ~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 780 (833)
+|||+++.+.............++..|+|||++.+..++.++|||||||++||+++ |+.||...... ++..... ...
T Consensus 159 ~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-~~~~~~~-~~~ 236 (280)
T cd05043 159 TDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPF-EMAAYLK-DGY 236 (280)
T ss_pred CCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHH-HHHHHHH-cCC
Confidence 99999986543322111123456778999999988889999999999999999999 99999754332 2221111 111
Q ss_pred cccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 781 KLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
... .. ...+.++.+++.+||+.||++|||+.||++.|+++
T Consensus 237 ~~~--------~~----~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~ 276 (280)
T cd05043 237 RLA--------QP----INCPDELFAVMACCWALDPEERPSFSQLVQCLTDF 276 (280)
T ss_pred CCC--------CC----CcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 100 00 11234678999999999999999999999999875
No 174
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.7e-38 Score=332.32 Aligned_cols=253 Identities=20% Similarity=0.259 Sum_probs=203.2
Q ss_pred HhcCCccccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
+.|.....||+|+||.||+|....+..||+|++.... ...+.|.+|++++++++|||++++++++. .+..++||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~ 79 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-----MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVT 79 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-----ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEE
Confidence 4577788999999999999998777789999984221 23467999999999999999999999875 56689999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
||+++|+|.++++......++|..+..++.|++.||+||| +.+|+||||||+||++++++.+|++|||+++......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05069 80 EFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIE---RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE 156 (260)
T ss_pred EcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCeEEECCCccceEccCCc
Confidence 9999999999998654456899999999999999999999 7889999999999999999999999999998764332
Q ss_pred CCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccccccCC
Q 003296 715 STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRT 793 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (833)
.. ......++..|+|||+..+..++.++|||||||++|||+| |+.||.+......+. ..... .. ...
T Consensus 157 ~~-~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~-~~~~~-~~------~~~--- 224 (260)
T cd05069 157 YT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLE-QVERG-YR------MPC--- 224 (260)
T ss_pred cc-ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-HHHcC-CC------CCC---
Confidence 11 1123346778999999988889999999999999999999 899997544322111 11110 00 000
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 003296 794 SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831 (833)
Q Consensus 794 ~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~ 831 (833)
....+..+.+++.+||+.||++||++++|.+.|++
T Consensus 225 ---~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 225 ---PQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred ---CcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 11234578899999999999999999999999986
No 175
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.8e-38 Score=331.40 Aligned_cols=249 Identities=21% Similarity=0.299 Sum_probs=201.8
Q ss_pred HhcCCccccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEe-cCCceEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVL-ASDSAYLF 633 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~-~~~~~~lv 633 (833)
.+|...+.||+|+||.||+|.. .|..||+|.++.. ...+.|.+|+.++++++|||++++++++. .++..++|
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv 78 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND------ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 78 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE-cCCcEEEEEeCCC------chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEE
Confidence 4677889999999999999986 4888999998421 22467999999999999999999999865 45678999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
|||+++|+|.++++......++|..+..++.|++.||+||| ..+|+||||||+||++++++.+|++|||+++.....
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 155 (256)
T cd05082 79 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 155 (256)
T ss_pred EECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeccccchheEEEcCCCcEEecCCccceecccc
Confidence 99999999999998654456899999999999999999999 789999999999999999999999999998865332
Q ss_pred CCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccccccC
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSR 792 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 792 (833)
. ....++..|+|||+..+..++.++|||||||++|||++ |+.||.... ........... .. +...
T Consensus 156 ~-----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~-~~~~~~~~~~~-~~------~~~~- 221 (256)
T cd05082 156 Q-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-LKDVVPRVEKG-YK------MDAP- 221 (256)
T ss_pred C-----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHhcC-CC------CCCC-
Confidence 2 23345678999999988889999999999999999998 999986432 22222211111 00 0000
Q ss_pred CchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 793 TSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 793 ~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
...+..+.+++.+|++.+|++|||+.+++++|+++
T Consensus 222 -----~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 222 -----DGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred -----CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 12345678999999999999999999999999874
No 176
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.4e-39 Score=344.16 Aligned_cols=258 Identities=20% Similarity=0.239 Sum_probs=202.9
Q ss_pred HhcCCccccccCcccEEEEEEcC--------CCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEe
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP--------SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVL 625 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~ 625 (833)
+.|...+.||+|+||.||+|... ++..||+|.++... .....+++.+|+++++++ +||||++++++|.
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA---TEKDLSDLISEMEMMKMIGKHKNIINLLGACT 94 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC---ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe
Confidence 56888899999999999999752 23579999994221 112345788999999999 7999999999999
Q ss_pred cCCceEEEEeeCCCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccce
Q 003296 626 ASDSAYLFYEYAPKGTLFDVLHGCL--------------ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNI 691 (833)
Q Consensus 626 ~~~~~~lv~ey~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Ni 691 (833)
..+..|+||||+++|+|.+++.... ...++|.++..++.|++.||+||| +.+++||||||+||
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Ni 171 (307)
T cd05098 95 QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNV 171 (307)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHHhe
Confidence 9999999999999999999997532 135899999999999999999999 78999999999999
Q ss_pred eeCCCCCceeccceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHH
Q 003296 692 FLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAK 770 (833)
Q Consensus 692 ll~~~~~~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~ 770 (833)
+++.++.+|++|||.++...............+++.|||||++.+..++.++|||||||++|||++ |+.||.+. ...+
T Consensus 172 ll~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~-~~~~ 250 (307)
T cd05098 172 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEE 250 (307)
T ss_pred EEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcC-CHHH
Confidence 999999999999999876532221111122335578999999988889999999999999999998 88888643 3222
Q ss_pred HHHHhhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 771 WVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 771 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
...... ..... .. ......++.+++.+||+.+|++||||.||+++|+++
T Consensus 251 ~~~~~~-~~~~~------~~------~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~ 299 (307)
T cd05098 251 LFKLLK-EGHRM------DK------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 299 (307)
T ss_pred HHHHHH-cCCCC------CC------CCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 222111 11100 00 012245778899999999999999999999999875
No 177
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.1e-38 Score=337.14 Aligned_cols=258 Identities=18% Similarity=0.220 Sum_probs=204.7
Q ss_pred HHhcCCccccccCcccEEEEEEcC------CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecC
Q 003296 554 EAVANPLNVELKTRFSTYYKAVMP------SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS 627 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~ 627 (833)
.++|...+.||+|+||.||+|... ++..||+|.+..... ......|.+|+.++++++||||+++++++...
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~---~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~ 81 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENAS---MRERIEFLNEASVMKEFNCHHVVRLLGVVSTG 81 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccC---HHHHHHHHHHHHHHHhCCCCceeEEEEEEcCC
Confidence 456788899999999999999864 347899999842211 12245789999999999999999999999999
Q ss_pred CceEEEEeeCCCCChhhhhhcCC--------CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCc
Q 003296 628 DSAYLFYEYAPKGTLFDVLHGCL--------ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEP 699 (833)
Q Consensus 628 ~~~~lv~ey~~~g~L~~~l~~~~--------~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ 699 (833)
+..++||||+++|+|.+++.... ...++|..+..++.|++.||.||| +.+|+||||||+||++++++.+
T Consensus 82 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~di~p~nill~~~~~~ 158 (277)
T cd05032 82 QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA---AKKFVHRDLAARNCMVAEDLTV 158 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccChheEEEcCCCCE
Confidence 99999999999999999997532 124789999999999999999999 7899999999999999999999
Q ss_pred eeccceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcc
Q 003296 700 QIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQ 778 (833)
Q Consensus 700 ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 778 (833)
|++|||+++...............+|..|+|||++.+..++.++|||||||++||++| |+.||.+.... +...... .
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-~~~~~~~-~ 236 (277)
T cd05032 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE-EVLKFVI-D 236 (277)
T ss_pred EECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH-HHHHHHh-c
Confidence 9999999986543322122234567889999999988889999999999999999998 99999643322 1111111 1
Q ss_pred cccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 003296 779 QDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831 (833)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~ 831 (833)
... . ..+. ..+.++.+++.+||+.+|++|||+.|+++.|++
T Consensus 237 ~~~-~-----~~~~------~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 237 GGH-L-----DLPE------NCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred CCC-C-----CCCC------CCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 110 0 0111 124578899999999999999999999999864
No 178
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=3.2e-39 Score=347.66 Aligned_cols=259 Identities=21% Similarity=0.210 Sum_probs=205.7
Q ss_pred hcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCC-C-----CCcccceEEEecCC
Q 003296 556 VANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLS-N-----SNVMTPLAYVLASD 628 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H-----~niv~~~~~~~~~~ 628 (833)
.|++.++||+|+||.|-||++ .+++.||||+++.+.. ...+-..|+.+|..++ | -|+|++++||..++
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-----f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~ 261 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-----FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRN 261 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH-----HHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccc
Confidence 678899999999999999997 5799999999964332 2345567999999997 5 38999999999999
Q ss_pred ceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCC--CCceecccee
Q 003296 629 SAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSL--KEPQIGDIEL 706 (833)
Q Consensus 629 ~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~--~~~ki~dfgl 706 (833)
+.|||+|.++. +|+++++......++....+.++.||+.||.+|| ..+|||+||||+||||.+- ..+||+|||.
T Consensus 262 HlciVfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~---~l~IIHcDLKPENILL~~~~r~~vKVIDFGS 337 (586)
T KOG0667|consen 262 HLCIVFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLH---ELGIIHCDLKPENILLKDPKRSRIKVIDFGS 337 (586)
T ss_pred ceeeeehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCChhheeeccCCcCceeEEeccc
Confidence 99999999965 9999999877778999999999999999999999 8899999999999999643 3789999999
Q ss_pred eeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccc
Q 003296 707 CKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHIL 786 (833)
Q Consensus 707 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (833)
|...... ..+.+-+..|.|||++.+.+|+.+.||||||||++||++|.+-|.++++.++........+.....++
T Consensus 338 Sc~~~q~-----vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL 412 (586)
T KOG0667|consen 338 SCFESQR-----VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKML 412 (586)
T ss_pred ccccCCc-----ceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 9865432 24678899999999999999999999999999999999998888877766554332221111111111
Q ss_pred ----------cc-----------c--------------------ccCC--ch----hHH-HHHHHHHHHHHhccCCCCCC
Q 003296 787 ----------DF-----------N--------------------VSRT--SL----AVR-SQMLTVLKVAVACVSVSPEA 818 (833)
Q Consensus 787 ----------~~-----------~--------------------~~~~--~~----~~~-~~~~~~~~l~~~cl~~dP~~ 818 (833)
+. . ...+ .. ... ..-..+++++.+|++.||.+
T Consensus 413 ~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~ 492 (586)
T KOG0667|consen 413 DTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAE 492 (586)
T ss_pred HhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchh
Confidence 00 0 0000 00 000 22346899999999999999
Q ss_pred CCCHHHHHHH
Q 003296 819 RPKMKSVLRM 828 (833)
Q Consensus 819 Rps~~evl~~ 828 (833)
|+|..|+++|
T Consensus 493 R~tp~qal~H 502 (586)
T KOG0667|consen 493 RITPAQALNH 502 (586)
T ss_pred cCCHHHHhcC
Confidence 9999999876
No 179
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=2e-38 Score=329.78 Aligned_cols=248 Identities=19% Similarity=0.265 Sum_probs=198.2
Q ss_pred cccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEeeCCCC
Q 003296 561 NVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKG 640 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey~~~g 640 (833)
++||+|+||.||+|..+++..||+|.+.... .......|.+|++++++++||||++++++|...+..++||||+++|
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 77 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDL---PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGG 77 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcC---CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCC
Confidence 3689999999999998889999999984221 1122357899999999999999999999999999999999999999
Q ss_pred ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCccc
Q 003296 641 TLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720 (833)
Q Consensus 641 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~~~ 720 (833)
+|.+++... ...++|.++..++.|++.||.|+| ..+++||||||+||+++.++.+|++|||++......... ...
T Consensus 78 ~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~-~~~ 152 (250)
T cd05085 78 DFLSFLRKK-KDELKTKQLVKFALDAAAGMAYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYS-SSG 152 (250)
T ss_pred cHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccChheEEEcCCCeEEECCCccceeccccccc-cCC
Confidence 999998753 345899999999999999999999 789999999999999999999999999998764322211 112
Q ss_pred cccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccccccCCchhHHH
Q 003296 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRS 799 (833)
Q Consensus 721 ~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (833)
...++..|+|||++.+..++.++|||||||++||+++ |..||.+..... ... ........ ... ..
T Consensus 153 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~-~~~-~~~~~~~~------~~~------~~ 218 (250)
T cd05085 153 LKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ-ARE-QVEKGYRM------SCP------QK 218 (250)
T ss_pred CCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH-HHH-HHHcCCCC------CCC------CC
Confidence 2345678999999988889999999999999999998 999997543221 111 11111100 000 12
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 003296 800 QMLTVLKVAVACVSVSPEARPKMKSVLRMLL 830 (833)
Q Consensus 800 ~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~ 830 (833)
.+.++.+++.+|++.+|++||++.|+++.|.
T Consensus 219 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 219 CPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 2457889999999999999999999999875
No 180
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=8.2e-39 Score=346.54 Aligned_cols=257 Identities=16% Similarity=0.188 Sum_probs=198.4
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
+|+..+.||+|+||.||+|+.. +++.||||++. +.........+.|.+|+.++.+++||||++++++|..++..|+||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~-~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILN-KWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEE-HHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 5778899999999999999974 78999999994 222222334567899999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
||+++|+|.+++.+. ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||++.......
T Consensus 81 e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (331)
T cd05597 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVH---QLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG 156 (331)
T ss_pred ecCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCC
Confidence 999999999999753 345889999999999999999999 8899999999999999999999999999997664332
Q ss_pred CCCccccccccccccccccccC-----CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccccccccc
Q 003296 715 STGSLSTVAGSVGYIPPEYAYT-----MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFN 789 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (833)
.. .....+||+.|||||++.. ..++.++|||||||++|||++|+.||.+......+. ..........
T Consensus 157 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~-~i~~~~~~~~------ 228 (331)
T cd05597 157 TV-QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG-KIMNHKEHFQ------ 228 (331)
T ss_pred Cc-cccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHH-HHHcCCCccc------
Confidence 21 1233579999999999863 457889999999999999999999997544322221 1111111000
Q ss_pred ccCCchhHHHHHHHHHHHHHhccCCCC--CCCCCHHHHHHH
Q 003296 790 VSRTSLAVRSQMLTVLKVAVACVSVSP--EARPKMKSVLRM 828 (833)
Q Consensus 790 ~~~~~~~~~~~~~~~~~l~~~cl~~dP--~~Rps~~evl~~ 828 (833)
+... ....+.++.+++.+|+..++ ..||+++|+++|
T Consensus 229 ~~~~---~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 229 FPPD---VTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred CCCc---cCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 0000 01134466778888775544 348899999876
No 181
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=4.4e-39 Score=352.71 Aligned_cols=264 Identities=18% Similarity=0.152 Sum_probs=201.1
Q ss_pred HHHHhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecC---
Q 003296 552 AMEAVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS--- 627 (833)
Q Consensus 552 ~~~~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~--- 627 (833)
...+.|...+.||+|+||.||+|... +++.||||++.... ......+.+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 91 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSL 91 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcc--cChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccc
Confidence 34567888999999999999999974 78999999984221 1122346788999999999999999999998654
Q ss_pred ---CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccc
Q 003296 628 ---DSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDI 704 (833)
Q Consensus 628 ---~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~df 704 (833)
...|+||||+++ ++.+.+.. .+++.++..++.|+++||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 92 ~~~~~~~lv~e~~~~-~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH---~~givHrDikp~Nill~~~~~~kl~Df 163 (355)
T cd07874 92 EEFQDVYLVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDF 163 (355)
T ss_pred cccceeEEEhhhhcc-cHHHHHhh----cCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEECCCCCEEEeeC
Confidence 347999999975 67777653 4889999999999999999999 789999999999999999999999999
Q ss_pred eeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccc----
Q 003296 705 ELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQD---- 780 (833)
Q Consensus 705 gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~---- 780 (833)
|+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+......+.........
T Consensus 164 g~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 240 (355)
T cd07874 164 GLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 240 (355)
T ss_pred cccccCCCcc---ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 9998654322 223467999999999999888999999999999999999999999865543333211110000
Q ss_pred -----------------ccccccccc------ccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 781 -----------------KLDHILDFN------VSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 781 -----------------~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.......+. .............++.+++.+|++.||++|||+.|+++|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 241 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 000000000 000000011123567899999999999999999999986
No 182
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.5e-38 Score=339.53 Aligned_cols=255 Identities=23% Similarity=0.274 Sum_probs=198.8
Q ss_pred HhcCCccccccCcccEEEEEEcC-CCc--eEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEecCCce
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP-SGM--SYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVLASDSA 630 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~ 630 (833)
++|...++||+|+||.||+|+.. +|. .+|+|.++... .....+.|.+|+++++++ +|||||++++++...+..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 78 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA---SENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYL 78 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC---CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcc
Confidence 35778899999999999999874 443 47888884211 112246799999999999 799999999999999999
Q ss_pred EEEEeeCCCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCC
Q 003296 631 YLFYEYAPKGTLFDVLHGCL--------------ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSL 696 (833)
Q Consensus 631 ~lv~ey~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~ 696 (833)
++||||+++|+|.++++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++++
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~ 155 (297)
T cd05089 79 YIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLS---EKQFIHRDLAARNVLVGEN 155 (297)
T ss_pred eEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCcCCcceEEECCC
Confidence 99999999999999997532 125889999999999999999999 7899999999999999999
Q ss_pred CCceeccceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHh
Q 003296 697 KEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRN 775 (833)
Q Consensus 697 ~~~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~ 775 (833)
+.+|++|||++........ ......+..|+|||+..+..++.++|||||||++|||+| |+.||...... ......
T Consensus 156 ~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~-~~~~~~ 231 (297)
T cd05089 156 LASKIADFGLSRGEEVYVK---KTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA-ELYEKL 231 (297)
T ss_pred CeEEECCcCCCccccceec---cCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHH
Confidence 9999999999864321111 111233567999999988889999999999999999998 99999754322 221111
Q ss_pred hcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 776 SAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
... ...... ...+..+.+++.+||+.+|.+||+++|++++|+++
T Consensus 232 ~~~-------~~~~~~------~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 275 (297)
T cd05089 232 PQG-------YRMEKP------RNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRM 275 (297)
T ss_pred hcC-------CCCCCC------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 110 000010 12334678999999999999999999999998765
No 183
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.1e-38 Score=340.23 Aligned_cols=250 Identities=21% Similarity=0.307 Sum_probs=203.1
Q ss_pred HhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
..|+..+.+|+|+||.||+|+. .+|+.||+|.+.... ....+.+.+|++++++++||||++++++|..++..|+|
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~----~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv 95 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ----QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCC----cchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEe
Confidence 3567778999999999999996 578999999984221 12346789999999999999999999999999999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
|||+++|+|.+++++ ..+++.++..++.|++.||+||| ..+|+||||||+||+++.++.+||+|||+++.....
T Consensus 96 ~e~~~~~~L~~~~~~---~~~~~~~~~~i~~ql~~aL~~LH---~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~ 169 (296)
T cd06654 96 MEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169 (296)
T ss_pred ecccCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEECccccchhcccc
Confidence 999999999999874 35899999999999999999999 788999999999999999999999999998765433
Q ss_pred CCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCC
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRT 793 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (833)
.. ......|++.|+|||++.+..++.++|||||||++|||++|+.||........+..... ... .. ..
T Consensus 170 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~-~~~--~~-----~~-- 237 (296)
T cd06654 170 QS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT-NGT--PE-----LQ-- 237 (296)
T ss_pred cc--ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhc-CCC--CC-----CC--
Confidence 21 12345789999999999888899999999999999999999999976544332221111 100 00 00
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 794 SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 794 ~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
........+.+++.+||+.||++|||+.|++++
T Consensus 238 --~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 238 --NPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred --CccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 011233567789999999999999999999875
No 184
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.9e-38 Score=333.72 Aligned_cols=258 Identities=19% Similarity=0.281 Sum_probs=204.1
Q ss_pred HHhcCCccccccCcccEEEEEEcC-CC---ceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCc
Q 003296 554 EAVANPLNVELKTRFSTYYKAVMP-SG---MSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDS 629 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~ 629 (833)
.++|+..+.||+|+||.||+|+.. ++ ..+|||++..... ....+.|.+|++++++++||||+++.+++...+.
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYT---EKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKP 80 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCC---HHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCC
Confidence 356788899999999999999974 33 3799999842211 1224679999999999999999999999999999
Q ss_pred eEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeee
Q 003296 630 AYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKV 709 (833)
Q Consensus 630 ~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~ 709 (833)
.++||||+++|+|.++++.. ...++|.++..++.|++.|++||| +.+++||||||+||++++++.+|++|||++..
T Consensus 81 ~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~ 156 (268)
T cd05063 81 AMIITEYMENGALDKYLRDH-DGEFSSYQLVGMLRGIAAGMKYLS---DMNYVHRDLAARNILVNSNLECKVSDFGLSRV 156 (268)
T ss_pred cEEEEEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEEcCCCcEEECCCcccee
Confidence 99999999999999999753 346899999999999999999999 78899999999999999999999999999986
Q ss_pred eCCCCCCCc-cccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhccccccccccc
Q 003296 710 IDPSKSTGS-LSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILD 787 (833)
Q Consensus 710 ~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (833)
......... ......+..|+|||++.+..++.++|||||||++|||++ |+.||...... ++..... ......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~-~~~~~i~-~~~~~~---- 230 (268)
T cd05063 157 LEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH-EVMKAIN-DGFRLP---- 230 (268)
T ss_pred cccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH-HHHHHHh-cCCCCC----
Confidence 643221111 111233567999999988889999999999999999998 99999754322 2221111 110000
Q ss_pred ccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 788 FNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
. ....+.++.+++.+||+.+|++||++.+|++.|+++
T Consensus 231 ----~----~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 231 ----A----PMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred ----C----CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0 012345788999999999999999999999999875
No 185
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.4e-38 Score=354.45 Aligned_cols=258 Identities=16% Similarity=0.161 Sum_probs=196.5
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
.|...+.||+|+||.||+|... +++.||||... ...+.+|++++++++|||||++++++...+..++||
T Consensus 170 gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~----------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~ 239 (461)
T PHA03211 170 GFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW----------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVL 239 (461)
T ss_pred CeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc----------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 5778889999999999999975 68899999752 234678999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
||+. |+|.+++... ...++|.+++.|+.|+++||+||| ..+||||||||+|||++.++.+||+|||+++......
T Consensus 240 e~~~-~~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~ 314 (461)
T PHA03211 240 PKYR-SDLYTYLGAR-LRPLGLAQVTAVARQLLSAIDYIH---GEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSW 314 (461)
T ss_pred EccC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCEEECcCCHHHEEECCCCCEEEcccCCceeccccc
Confidence 9995 7999988753 336999999999999999999999 7899999999999999999999999999998764332
Q ss_pred CCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCc------c----HHHHHHHhhcccccccc
Q 003296 715 STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGN------E----LAKWVLRNSAQQDKLDH 784 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~------~----~~~~~~~~~~~~~~~~~ 784 (833)
........+||+.|||||++.+..++.++|||||||++|||++|..|+.... . +...+............
T Consensus 315 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~ 394 (461)
T PHA03211 315 STPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQ 394 (461)
T ss_pred ccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCC
Confidence 2222234679999999999999899999999999999999999887653211 0 11111110000000000
Q ss_pred ccc----------------ccccCCc-hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 785 ILD----------------FNVSRTS-LAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 785 ~~~----------------~~~~~~~-~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
... +...... .........+.+++.+||+.||++|||+.|++++
T Consensus 395 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 395 HAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred CcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 000 0000000 0001123467889999999999999999999986
No 186
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=2.1e-38 Score=330.88 Aligned_cols=249 Identities=18% Similarity=0.245 Sum_probs=195.2
Q ss_pred ccccCcccEEEEEEcC---CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEeeCC
Q 003296 562 VELKTRFSTYYKAVMP---SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAP 638 (833)
Q Consensus 562 ~ig~g~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey~~ 638 (833)
.||+|+||.||+|+.. ++..||||.+.... .....++|.+|++++++++|||||+++++|. .+..++||||++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~---~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~ 77 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN---EKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMAS 77 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc---ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCC
Confidence 3899999999999763 45679999984221 1223467999999999999999999999885 457899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCC-
Q 003296 639 KGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG- 717 (833)
Q Consensus 639 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~- 717 (833)
+|+|.+++... ...+++.++..++.|++.||+||| ..+++||||||+||+++.++.+|++|||+++.........
T Consensus 78 ~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 153 (257)
T cd05115 78 GGPLNKFLSGK-KDEITVSNVVELMHQVSMGMKYLE---GKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYK 153 (257)
T ss_pred CCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHH---hcCeeecccchheEEEcCCCcEEeccCCccccccCCcccee
Confidence 99999999753 346899999999999999999999 7899999999999999999999999999998654332211
Q ss_pred ccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccccccCCchh
Q 003296 718 SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLA 796 (833)
Q Consensus 718 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (833)
......++..|+|||++.+..++.++|||||||++||+++ |+.||....... +... ....... ...
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~~~~-~~~~~~~------~~~----- 220 (257)
T cd05115 154 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE-VMSF-IEQGKRL------DCP----- 220 (257)
T ss_pred ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH-HHHH-HHCCCCC------CCC-----
Confidence 1112234678999999988889999999999999999996 999997543322 1111 1111110 000
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 797 VRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 797 ~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
...+.++.+++.+||+.||++||++.+|.+.|+.+
T Consensus 221 -~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 221 -AECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred -CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 12245778999999999999999999999999864
No 187
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.5e-38 Score=338.24 Aligned_cols=258 Identities=21% Similarity=0.290 Sum_probs=203.8
Q ss_pred HHhcCCccccccCcccEEEEEEcC------CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecC
Q 003296 554 EAVANPLNVELKTRFSTYYKAVMP------SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS 627 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~ 627 (833)
.++|+..+.||+|+||.||+|... ++..||+|++..... ....++|.+|++++++++|||||+++++|..+
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~ 80 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS---ADMQADFQREAALMAEFDHPNIVKLLGVCAVG 80 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcC---HHHHHHHHHHHHHHHhcCCCchheEEEEEcCC
Confidence 457888999999999999999863 568899999842211 12346799999999999999999999999999
Q ss_pred CceEEEEeeCCCCChhhhhhcCC--------------------CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCC
Q 003296 628 DSAYLFYEYAPKGTLFDVLHGCL--------------------ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLS 687 (833)
Q Consensus 628 ~~~~lv~ey~~~g~L~~~l~~~~--------------------~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk 687 (833)
+..++||||+++|+|.+++.... ...+++.+++.++.|++.||+||| ..+++|||||
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH---~~~i~H~dl~ 157 (288)
T cd05050 81 KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLS---ERKFVHRDLA 157 (288)
T ss_pred CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCeeccccc
Confidence 99999999999999999997421 124788999999999999999999 7899999999
Q ss_pred ccceeeCCCCCceeccceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCc
Q 003296 688 TRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGN 766 (833)
Q Consensus 688 ~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~ 766 (833)
|+||++++++.+|++|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |..||.+..
T Consensus 158 p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~ 237 (288)
T cd05050 158 TRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMA 237 (288)
T ss_pred HhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 9999999999999999999886543221111123345678999999988889999999999999999998 888886433
Q ss_pred cHHHHHHHhhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 003296 767 ELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831 (833)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~ 831 (833)
. .++..... .... ... ....+.++.+++.+||+.||++|||+.|+++.|++
T Consensus 238 ~-~~~~~~~~-~~~~---------~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 238 H-EEVIYYVR-DGNV---------LSC---PDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred H-HHHHHHHh-cCCC---------CCC---CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 2 22222111 1110 000 01234578899999999999999999999999874
No 188
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=4.8e-39 Score=348.70 Aligned_cols=244 Identities=17% Similarity=0.176 Sum_probs=190.3
Q ss_pred cccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcC---CCCCcccceEEEecCCceEEEEeeCC
Q 003296 563 ELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL---SNSNVMTPLAYVLASDSAYLFYEYAP 638 (833)
Q Consensus 563 ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l---~H~niv~~~~~~~~~~~~~lv~ey~~ 638 (833)
||+|+||+||+|+.. +|+.||||++.. ...........+..|..++.+. +||||+++++++..++..|+||||++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~-~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~ 79 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSK-KEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMS 79 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeH-HHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCC
Confidence 699999999999974 799999999942 2222222334566788887766 69999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCc
Q 003296 639 KGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGS 718 (833)
Q Consensus 639 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~ 718 (833)
+|+|.+++.. ...+++..+..++.|+++||+||| +.+|+||||||+|||++.++.+||+|||+++....... .
T Consensus 80 ~g~L~~~l~~--~~~~~~~~~~~~~~qil~al~~LH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~--~ 152 (330)
T cd05586 80 GGELFWHLQK--EGRFSEDRAKFYIAELVLALEHLH---KYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNK--T 152 (330)
T ss_pred CChHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCC--C
Confidence 9999999875 456899999999999999999999 78999999999999999999999999999875432221 2
Q ss_pred cccccccccccccccccCC-cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchhH
Q 003296 719 LSTVAGSVGYIPPEYAYTM-RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAV 797 (833)
Q Consensus 719 ~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (833)
....+||+.|||||++.+. .++.++||||+||++|||+||+.||...... +.......... .+..
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~-~~~~~i~~~~~--------~~~~----- 218 (330)
T cd05586 153 TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQ-QMYRNIAFGKV--------RFPK----- 218 (330)
T ss_pred ccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHH-HHHHHHHcCCC--------CCCC-----
Confidence 2456799999999998754 4899999999999999999999999754322 21111111100 0110
Q ss_pred HHHHHHHHHHHHhccCCCCCCCC----CHHHHHHH
Q 003296 798 RSQMLTVLKVAVACVSVSPEARP----KMKSVLRM 828 (833)
Q Consensus 798 ~~~~~~~~~l~~~cl~~dP~~Rp----s~~evl~~ 828 (833)
.....++.+++.+||+.||++|| ++.|+++|
T Consensus 219 ~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h 253 (330)
T cd05586 219 NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEH 253 (330)
T ss_pred ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcC
Confidence 01234667899999999999998 56666553
No 189
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.8e-38 Score=332.89 Aligned_cols=256 Identities=19% Similarity=0.244 Sum_probs=204.0
Q ss_pred HhcCCccccccCcccEEEEEEc-CCCceEEEEEccccch-hhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDK-IFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYL 632 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 632 (833)
++|+..+.||+|+||.||+|.. .+|+.||+|.+..... .......+.+.+|++++++++||||+++++++..++..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 3577889999999999999996 4789999999842211 1111234578999999999999999999999999999999
Q ss_pred EEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCC
Q 003296 633 FYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDP 712 (833)
Q Consensus 633 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~ 712 (833)
||||+++|+|.+++.. ...+++..+..++.|++.|++||| ..+|+||||||+||++++++.+|++|||+++....
T Consensus 82 v~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~ 156 (263)
T cd06625 82 FMEYMPGGSVKDQLKA--YGALTETVTRKYTRQILEGVEYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQT 156 (263)
T ss_pred EEEECCCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceeccc
Confidence 9999999999999976 346889999999999999999999 78999999999999999999999999999986543
Q ss_pred CCCCC-ccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccccccccccc
Q 003296 713 SKSTG-SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVS 791 (833)
Q Consensus 713 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (833)
..... ......|+..|+|||++.+..++.++||||+||++|||++|+.||............. .. ... ..+.
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~-~~-~~~-----~~~~ 229 (263)
T cd06625 157 ICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIA-TQ-PTN-----PQLP 229 (263)
T ss_pred cccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHh-cc-CCC-----CCCC
Confidence 22111 1123568899999999998889999999999999999999999997544332221111 11 000 0011
Q ss_pred CCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 792 RTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 792 ~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
......+.+++.+||+.+|++|||+.|++++
T Consensus 230 ------~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 230 ------SHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred ------ccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 1233467889999999999999999999875
No 190
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=2e-38 Score=338.62 Aligned_cols=263 Identities=18% Similarity=0.237 Sum_probs=200.8
Q ss_pred HhcCCccccccCcccEEEEEEcC-----------------CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCc
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP-----------------SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNV 617 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~-----------------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~ni 617 (833)
++|+..+.||+|+||.||++... ++..||+|++.... .....++|.+|++++++++||||
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~---~~~~~~~~~~E~~~l~~l~~~~i 81 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA---NKNARNDFLKEIKIMSRLKDPNI 81 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCCc
Confidence 46888899999999999998532 34579999984221 12234689999999999999999
Q ss_pred ccceEEEecCCceEEEEeeCCCCChhhhhhcCCC---------CCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCc
Q 003296 618 MTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLE---------NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLST 688 (833)
Q Consensus 618 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~---------~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~ 688 (833)
+++++++..++..++||||+++|+|.+++..... ..++|.++..++.|++.|++||| +.+|+||||||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dlkp 158 (296)
T cd05095 82 IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS---SLNFVHRDLAT 158 (296)
T ss_pred ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCh
Confidence 9999999999999999999999999999875321 24788899999999999999999 78899999999
Q ss_pred cceeeCCCCCceeccceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh--CCCcccCCc
Q 003296 689 RNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT--GKTAVNQGN 766 (833)
Q Consensus 689 ~Nill~~~~~~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt--g~~p~~~~~ 766 (833)
+||+++.++.+|++|||+++...............+++.|+|||+..++.++.++|||||||++|||++ |..||....
T Consensus 159 ~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~ 238 (296)
T cd05095 159 RNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLS 238 (296)
T ss_pred heEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccC
Confidence 999999999999999999986543221111123345678999999888889999999999999999998 778886433
Q ss_pred cHHHHHHHhhccc-ccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 003296 767 ELAKWVLRNSAQQ-DKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831 (833)
Q Consensus 767 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~ 831 (833)
.. +......... ........ ... ...+..+.+++.+||+.||++||+|.||++.|++
T Consensus 239 ~~-~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 239 DE-QVIENTGEFFRDQGRQVYL---PKP----ALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred hH-HHHHHHHHHHhhccccccC---CCC----CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 21 1111110000 00000000 000 1223577899999999999999999999999874
No 191
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=1e-38 Score=338.55 Aligned_cols=265 Identities=22% Similarity=0.277 Sum_probs=200.7
Q ss_pred cCCccccccCcccEEEEEEc-----CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecC--Cc
Q 003296 557 ANPLNVELKTRFSTYYKAVM-----PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS--DS 629 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~--~~ 629 (833)
|...+.||+|+||+||.+.. .++..||+|.++... .....+.|.+|++++++++||||++++++|... ..
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC---GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKG 82 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc---ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCce
Confidence 47788999999999987652 468899999984221 112356789999999999999999999998764 35
Q ss_pred eEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeee
Q 003296 630 AYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKV 709 (833)
Q Consensus 630 ~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~ 709 (833)
.++||||+++|+|.+++.. ..++|.++..++.|++.||+||| +.+|+||||||+||++++++.+|++|||+++.
T Consensus 83 ~~lv~e~~~~~~l~~~~~~---~~l~~~~~~~i~~~l~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~ 156 (283)
T cd05080 83 LQLIMEYVPLGSLRDYLPK---HKLNLAQLLLFAQQICEGMAYLH---SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKA 156 (283)
T ss_pred EEEEecCCCCCCHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccChheEEEcCCCcEEEeecccccc
Confidence 8999999999999999975 35899999999999999999999 78999999999999999999999999999987
Q ss_pred eCCCCCCCc-cccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhc-c--ccccccc
Q 003296 710 IDPSKSTGS-LSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSA-Q--QDKLDHI 785 (833)
Q Consensus 710 ~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~-~--~~~~~~~ 785 (833)
......... .....++..|+|||+..+..++.++|||||||++|||+||+.|+............... . .......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd05080 157 VPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIEL 236 (283)
T ss_pred cCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhh
Confidence 643221111 12234567899999998888999999999999999999999998643221110000000 0 0001111
Q ss_pred ccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 786 LDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
.+...... .....+.++.+++.+||+.||++|||+++|++.|+++
T Consensus 237 ~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~ 281 (283)
T cd05080 237 LERGMRLP--CPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM 281 (283)
T ss_pred hhcCCCCC--CCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence 11111111 0112346788999999999999999999999999876
No 192
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.2e-38 Score=341.14 Aligned_cols=255 Identities=25% Similarity=0.296 Sum_probs=199.1
Q ss_pred HhcCCccccccCcccEEEEEEcC-CCc--eEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEecCCce
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP-SGM--SYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVLASDSA 630 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~ 630 (833)
++|+..+.||+|+||.||+|.+. +|. .+|+|+++... .....+.|.+|++++.++ +|||||++++++..++..
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~ 83 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA---SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 83 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccC---CHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCc
Confidence 56788899999999999999964 554 45777773211 112346789999999999 899999999999999999
Q ss_pred EEEEeeCCCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCC
Q 003296 631 YLFYEYAPKGTLFDVLHGCL--------------ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSL 696 (833)
Q Consensus 631 ~lv~ey~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~ 696 (833)
|+||||+++|+|.++++... ...+++.+++.++.|++.|++||| +.+|+||||||+|||++++
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dlkp~Nili~~~ 160 (303)
T cd05088 84 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGEN 160 (303)
T ss_pred eEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEecCC
Confidence 99999999999999997532 125789999999999999999999 7899999999999999999
Q ss_pred CCceeccceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHh
Q 003296 697 KEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRN 775 (833)
Q Consensus 697 ~~~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~ 775 (833)
+.+|++|||+++...... ......++..|+|||++.+..++.++|||||||++|||+| |..||..... .+.....
T Consensus 161 ~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-~~~~~~~ 236 (303)
T cd05088 161 YVAKIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-AELYEKL 236 (303)
T ss_pred CcEEeCccccCcccchhh---hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCCh-HHHHHHH
Confidence 999999999986432111 1112334678999999888889999999999999999998 9999964332 1211111
Q ss_pred hcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 776 SAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
....... .. ...+.++.+++.+||+.+|++||++++++++|+++
T Consensus 237 -~~~~~~~------~~------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~ 280 (303)
T cd05088 237 -PQGYRLE------KP------LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 280 (303)
T ss_pred -hcCCcCC------CC------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 1100000 00 11234678999999999999999999999998764
No 193
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=7.3e-39 Score=346.91 Aligned_cols=257 Identities=15% Similarity=0.172 Sum_probs=200.4
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
+|...+.||+|+||.||+++.. +++.||||.+.. .........+.|.+|+.++.+++||||+++++++.+++..|+||
T Consensus 2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~-~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNK-WEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeH-HHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 5778899999999999999974 788999999842 22222333556889999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
||+++|+|.++++.. ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 81 Ey~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~~L~~lH---~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 156 (331)
T cd05624 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYIAEMVLAIHSIH---QLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG 156 (331)
T ss_pred eCCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCC
Confidence 999999999999753 246889999999999999999999 8899999999999999999999999999998764332
Q ss_pred CCCccccccccccccccccccC-----CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccccccccc
Q 003296 715 STGSLSTVAGSVGYIPPEYAYT-----MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFN 789 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (833)
.. .....+||+.|||||++.+ ..++.++|||||||++|||++|+.||........+. ......... .
T Consensus 157 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~-~i~~~~~~~------~ 228 (331)
T cd05624 157 TV-QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG-KIMNHEERF------Q 228 (331)
T ss_pred ce-eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHH-HHHcCCCcc------c
Confidence 21 2234679999999998865 467899999999999999999999997544322221 111110100 0
Q ss_pred ccCCchhHHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHH
Q 003296 790 VSRTSLAVRSQMLTVLKVAVACVSVSPEA--RPKMKSVLRM 828 (833)
Q Consensus 790 ~~~~~~~~~~~~~~~~~l~~~cl~~dP~~--Rps~~evl~~ 828 (833)
.+ ......+.++.+++.+|+..++++ |++++++++|
T Consensus 229 ~p---~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 229 FP---SHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred CC---CccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 00 001123457788999998876654 4689988765
No 194
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.3e-38 Score=332.63 Aligned_cols=250 Identities=21% Similarity=0.299 Sum_probs=205.1
Q ss_pred HhcCCccccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
++|+..+.+|+|+||.||+|.. .|+.||||++..... ..+++.+|+.++++++||||+++++++...+..++||
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~-~~~~v~iK~~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 79 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDY-RGQKVAVKCLKDDST-----AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVT 79 (256)
T ss_pred hhccceeeeecCCCceEEEEEe-cCcEEEEEEeccchh-----HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEE
Confidence 4678889999999999999987 489999999942211 3578999999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
||+++|+|.++++......++|..+..++.|++.||.||| ..+++||||||+||+++.++.+|++|||.++......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~ 156 (256)
T cd05039 80 EYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ 156 (256)
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccchhcccceEEEeCCCCEEEccccccccccccc
Confidence 9999999999998654447999999999999999999999 7899999999999999999999999999998763221
Q ss_pred CCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccccccCC
Q 003296 715 STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRT 793 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (833)
....++..|+|||++.+..++.++|||||||++|||++ |+.||..... ...... ....... ..
T Consensus 157 -----~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-~~~~~~-~~~~~~~------~~--- 220 (256)
T cd05039 157 -----DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-KDVVPH-VEKGYRM------EA--- 220 (256)
T ss_pred -----ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH-HHHHHH-HhcCCCC------CC---
Confidence 12345678999999988889999999999999999997 9999864422 111111 1110000 00
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 794 SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 794 ~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
....+.++.+++.+||+.+|++|||+.|++++|+++
T Consensus 221 ---~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 221 ---PEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred ---ccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 012245778999999999999999999999999874
No 195
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-39 Score=339.97 Aligned_cols=255 Identities=20% Similarity=0.263 Sum_probs=202.0
Q ss_pred HhcCCccccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCC-CCCcccceEEEecCCceEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLS-NSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~~~~lv 633 (833)
..|+..+.||+||.+.||++...+.+.||+|++.. ...+.+....|..|++.|.+++ |.+||++++|-..++.+|+|
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~--~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmv 438 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVL--LEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMV 438 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHH--hhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEE
Confidence 34667789999999999999998999999999842 2334455678999999999996 99999999999999999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
|||-+- ||.++|+.......+| .++.|..|++.|+.++| ..+|||.||||+|.|+- .|.+|++|||+|..+...
T Consensus 439 mE~Gd~-DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH---~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~D 512 (677)
T KOG0596|consen 439 MECGDI-DLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIH---QHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPD 512 (677)
T ss_pred eecccc-cHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHH---HhceeecCCCcccEEEE-eeeEEeeeechhcccCcc
Confidence 998755 9999999765555567 67789999999999999 78999999999999995 588999999999988655
Q ss_pred CCCCccccccccccccccccccCC-----------cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccc
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTM-----------RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKL 782 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 782 (833)
.........+||+.||+||.+... +.+.++||||+|||+|+|+.|+.||..-.. .| .++
T Consensus 513 TTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n--~~--------aKl 582 (677)
T KOG0596|consen 513 TTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN--QI--------AKL 582 (677)
T ss_pred ccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH--HH--------HHH
Confidence 433233457899999999987532 267899999999999999999999963211 12 123
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 783 DHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
..+.|+....+.+.. ....++++++..||+.||++||++.|+++|
T Consensus 583 ~aI~~P~~~Iefp~~-~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 583 HAITDPNHEIEFPDI-PENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred HhhcCCCccccccCC-CCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 334444322111111 112248899999999999999999999875
No 196
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=7.3e-39 Score=339.90 Aligned_cols=267 Identities=23% Similarity=0.300 Sum_probs=201.6
Q ss_pred HhcCCccccccCcccEEEEEEc-----CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecC--
Q 003296 555 AVANPLNVELKTRFSTYYKAVM-----PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS-- 627 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~-- 627 (833)
+.|+..+.||+|+||.||+|.. .++..||||++.... ....+.|.+|++++++++|||||++++++...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 79 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST----AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 79 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC----HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCC
Confidence 4577789999999999999974 368899999984322 12346799999999999999999999987643
Q ss_pred CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceee
Q 003296 628 DSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELC 707 (833)
Q Consensus 628 ~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~ 707 (833)
...++||||+++|+|.+++.+. ...++|..+..++.|++.||+||| ..+|+||||||+||++++++.+|++|||++
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~aL~~LH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~ 155 (284)
T cd05081 80 RNLRLVMEYLPYGSLRDYLQKH-RERLDHRKLLLYASQICKGMEYLG---SKRYVHRDLATRNILVESENRVKIGDFGLT 155 (284)
T ss_pred CceEEEEEecCCCCHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHhhEEECCCCeEEECCCccc
Confidence 4689999999999999999753 235899999999999999999999 789999999999999999999999999999
Q ss_pred eeeCCCCCCCc-cccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccc---c--
Q 003296 708 KVIDPSKSTGS-LSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQD---K-- 781 (833)
Q Consensus 708 ~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~---~-- 781 (833)
+.......... .....++..|+|||+..+..++.++|||||||++|||++|..|+..... .+......... .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 233 (284)
T cd05081 156 KVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPA--EFMRMMGNDKQGQMIVY 233 (284)
T ss_pred ccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcch--hhhhhcccccccccchH
Confidence 87643322111 1122345569999999888899999999999999999999877642211 11111000000 0
Q ss_pred -ccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhcC
Q 003296 782 -LDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNAR 833 (833)
Q Consensus 782 -~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~r 833 (833)
+.+.+....... .....+.++.+++.+||+.+|++||||+||++.|+.+|
T Consensus 234 ~~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~~ 284 (284)
T cd05081 234 HLIELLKNNGRLP--APPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAIR 284 (284)
T ss_pred HHHHHHhcCCcCC--CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhcC
Confidence 000010000000 01123457889999999999999999999999999886
No 197
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=9.3e-39 Score=346.43 Aligned_cols=257 Identities=16% Similarity=0.167 Sum_probs=199.1
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
+|+..+.||+|+||.||+++.. +++.||+|++. +.........+.|.+|+.++..++||||+++++++.+++..|+||
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~-~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILN-KWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEe-HHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 5777899999999999999975 67889999984 222222233456889999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
||+++|+|.+++++. ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 81 ey~~~g~L~~~l~~~-~~~l~~~~~~~~~~qi~~al~~lH---~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~ 156 (332)
T cd05623 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 156 (332)
T ss_pred eccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEeecchheecccCC
Confidence 999999999999753 235899999999999999999999 7899999999999999999999999999997653322
Q ss_pred CCCcccccccccccccccccc-----CCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccccccccc
Q 003296 715 STGSLSTVAGSVGYIPPEYAY-----TMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFN 789 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (833)
. ......+||+.|||||++. ...++.++|||||||++|||++|+.||........ ........... .
T Consensus 157 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~-~~~i~~~~~~~------~ 228 (332)
T cd05623 157 T-VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET-YGKIMNHKERF------Q 228 (332)
T ss_pred c-ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHH-HHHHhCCCccc------c
Confidence 1 1223467999999999886 34588999999999999999999999975543222 22211111100 0
Q ss_pred ccCCchhHHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHH
Q 003296 790 VSRTSLAVRSQMLTVLKVAVACVSVSPEA--RPKMKSVLRM 828 (833)
Q Consensus 790 ~~~~~~~~~~~~~~~~~l~~~cl~~dP~~--Rps~~evl~~ 828 (833)
.+. .....+.++.+++.+|+..+|++ ||++.|+++|
T Consensus 229 ~p~---~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 229 FPA---QVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred CCC---ccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 000 01123456778888888655444 6899999876
No 198
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.8e-38 Score=337.47 Aligned_cols=259 Identities=18% Similarity=0.221 Sum_probs=202.2
Q ss_pred HHHhcCCccccccCcccEEEEEEcC------CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEec
Q 003296 553 MEAVANPLNVELKTRFSTYYKAVMP------SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLA 626 (833)
Q Consensus 553 ~~~~~~~~~~ig~g~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~ 626 (833)
..+.|+..+.||+|+||.||+|... .+..||+|.+..... ......|.+|+.++++++||||+++++++..
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 80 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS---LRERIEFLNEASVMKGFTCHHVVRLLGVVSK 80 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCC---HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence 3567888999999999999999743 356899999842211 1223568899999999999999999999999
Q ss_pred CCceEEEEeeCCCCChhhhhhcCC--------CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCC
Q 003296 627 SDSAYLFYEYAPKGTLFDVLHGCL--------ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKE 698 (833)
Q Consensus 627 ~~~~~lv~ey~~~g~L~~~l~~~~--------~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~ 698 (833)
.+..++||||+++|+|.++++... ....++..+..++.|++.||+||| +++|+||||||+||++++++.
T Consensus 81 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dikp~nili~~~~~ 157 (288)
T cd05061 81 GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFT 157 (288)
T ss_pred CCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCCChheEEEcCCCc
Confidence 999999999999999999997532 124577888999999999999999 789999999999999999999
Q ss_pred ceeccceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhc
Q 003296 699 PQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSA 777 (833)
Q Consensus 699 ~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~ 777 (833)
+|++|||+++...............++..|+|||+..+..++.++|||||||++|||++ |+.||.+... .+......
T Consensus 158 ~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~-~~~~~~~~- 235 (288)
T cd05061 158 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQVLKFVM- 235 (288)
T ss_pred EEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHH-
Confidence 99999999986543222111123346778999999988889999999999999999999 7888864322 22211111
Q ss_pred ccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 003296 778 QQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831 (833)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~ 831 (833)
..... ... ...+..+.+++.+|++.||++|||+.|+++.|++
T Consensus 236 ~~~~~---------~~~---~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~ 277 (288)
T cd05061 236 DGGYL---------DQP---DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 277 (288)
T ss_pred cCCCC---------CCC---CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 11110 000 1123578899999999999999999999999875
No 199
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1.5e-38 Score=341.35 Aligned_cols=261 Identities=18% Similarity=0.224 Sum_probs=201.4
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
+|+..+.||+|+||.||+|... +|..||+|.+..... ....+++.+|++++++++|||||+++++|..++..++||
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIK---PAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICM 78 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccC---HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEe
Confidence 5778899999999999999964 788999998842211 122456889999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
||+++|+|.++++. ...+++..+..++.|+++||+|||+ ..+++||||||+||+++.++.+|++|||++.......
T Consensus 79 ey~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 154 (308)
T cd06615 79 EHMDGGSLDQVLKK--AGRIPENILGKISIAVLRGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 154 (308)
T ss_pred eccCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHh--hCCEEECCCChHHEEEecCCcEEEccCCCcccccccc
Confidence 99999999999986 3568999999999999999999994 2589999999999999999999999999987653221
Q ss_pred CCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccc----------
Q 003296 715 STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDH---------- 784 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---------- 784 (833)
.....|++.|+|||+..+..++.++|||||||++|||++|+.||..... ..+.............
T Consensus 155 ----~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (308)
T cd06615 155 ----ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDA-KELEAMFGRPVSEGEAKESHRPVSGH 229 (308)
T ss_pred ----cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcch-hhHHHhhcCccccccccCCcccccCC
Confidence 2346789999999998888899999999999999999999999964332 1111111100000000
Q ss_pred ------------cccccccC--CchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 785 ------------ILDFNVSR--TSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 785 ------------~~~~~~~~--~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
..+..... +.........++.+++.+||+.||++|||++||+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 230 PPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred CCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000000 000001134568899999999999999999999876
No 200
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=2e-38 Score=332.39 Aligned_cols=251 Identities=21% Similarity=0.270 Sum_probs=193.3
Q ss_pred cccccCcccEEEEEEcC----CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEec-CCceEEEEe
Q 003296 561 NVELKTRFSTYYKAVMP----SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLA-SDSAYLFYE 635 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~-~~~~~lv~e 635 (833)
+.||+|+||.||+|... ++..||+|++.... .....+.|.+|+.++++++|||||++++++.. ++..++|||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e 77 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT---DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLP 77 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccC---CHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEe
Confidence 46899999999999853 34679999984221 11234678999999999999999999998764 556899999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCC
Q 003296 636 YAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715 (833)
Q Consensus 636 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~ 715 (833)
|+++|+|.++++.. ....++..+..++.|+++||+||| ..+++||||||+||++++++.+|++|||+++.......
T Consensus 78 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~ 153 (262)
T cd05058 78 YMKHGDLRNFIRSE-THNPTVKDLIGFGLQVAKGMEYLA---SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEY 153 (262)
T ss_pred cCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCccccccccCCcc
Confidence 99999999999753 234688888999999999999999 78999999999999999999999999999976532211
Q ss_pred C--CccccccccccccccccccCCcccccCcchhhHHHHHHHHhC-CCcccCCccHHHHHHHhhcccccccccccccccC
Q 003296 716 T--GSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG-KTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSR 792 (833)
Q Consensus 716 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 792 (833)
. .......++..|+|||+..+..++.++|||||||++|||++| .+||.... ........... ... ..
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~-~~~~~~~~~~~-~~~------~~-- 223 (262)
T cd05058 154 YSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD-SFDITVYLLQG-RRL------LQ-- 223 (262)
T ss_pred eeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC-HHHHHHHHhcC-CCC------CC--
Confidence 0 011234567889999999888899999999999999999995 55565332 22222111111 000 00
Q ss_pred CchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 793 TSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 793 ~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
....+..+.+++.+||+.+|++||++.||+++|+++
T Consensus 224 ----~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~ 259 (262)
T cd05058 224 ----PEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQI 259 (262)
T ss_pred ----CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 011234678999999999999999999999999875
No 201
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=9.6e-39 Score=351.17 Aligned_cols=263 Identities=17% Similarity=0.157 Sum_probs=200.6
Q ss_pred HHHhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecC----
Q 003296 553 MEAVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS---- 627 (833)
Q Consensus 553 ~~~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~---- 627 (833)
..+.|...+.||+|+||.||+|... .++.||||++.... ......+.+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~ 99 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLE 99 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccc--cCchhHHHHHHHHHHHHhcCCCCccccceeeccccccc
Confidence 4567888999999999999999974 78999999994221 1223346788999999999999999999988653
Q ss_pred --CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccce
Q 003296 628 --DSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIE 705 (833)
Q Consensus 628 --~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfg 705 (833)
...|+||||+++ +|.+.+.. .+++.++..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 100 ~~~~~~lv~e~~~~-~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG 171 (364)
T cd07875 100 EFQDVYIVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFG 171 (364)
T ss_pred ccCeEEEEEeCCCC-CHHHHHHh----cCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEECCCCcEEEEeCC
Confidence 357999999975 78777753 4789999999999999999999 7899999999999999999999999999
Q ss_pred eeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccc-
Q 003296 706 LCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDH- 784 (833)
Q Consensus 706 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~- 784 (833)
+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+......+............+
T Consensus 172 ~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 248 (364)
T cd07875 172 LARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEF 248 (364)
T ss_pred CccccCCCC---cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence 998654322 2234679999999999999899999999999999999999999998655443332211100000000
Q ss_pred ----------ccc--------------ccc--cCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 785 ----------ILD--------------FNV--SRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 785 ----------~~~--------------~~~--~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
... +.. ............++.+++.+|++.||++|||+.|+++|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 249 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000 000 00000001123467899999999999999999999876
No 202
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=3.8e-38 Score=331.23 Aligned_cols=253 Identities=18% Similarity=0.204 Sum_probs=188.3
Q ss_pred ccccCcccEEEEEEcCCC---ceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEeeCC
Q 003296 562 VELKTRFSTYYKAVMPSG---MSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAP 638 (833)
Q Consensus 562 ~ig~g~~g~vy~~~~~~~---~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey~~ 638 (833)
.||+|+||.||+|...++ ..+++|.+.... .....+.|.+|+.++++++|||||+++++|......|+||||++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA---SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCE 78 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC---ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCC
Confidence 589999999999986443 345666663211 12235789999999999999999999999999999999999999
Q ss_pred CCChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCC
Q 003296 639 KGTLFDVLHGCL--ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKST 716 (833)
Q Consensus 639 ~g~L~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~ 716 (833)
+|+|.+++++.. ....++.....++.|+++||+||| +.+|+||||||+|||++.++.+|++|||++.........
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~ 155 (268)
T cd05086 79 LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMH---KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYI 155 (268)
T ss_pred CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCeeccCCccceEEEcCCccEEecccccccccCcchhh
Confidence 999999998532 234677788899999999999999 788999999999999999999999999998643222111
Q ss_pred CccccccccccccccccccC-------CcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccc
Q 003296 717 GSLSTVAGSVGYIPPEYAYT-------MRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDF 788 (833)
Q Consensus 717 ~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (833)
.......|+..|+|||+... ..++.++|||||||++|||++ |..||....... ........ ......++
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-~~~~~~~~--~~~~~~~~ 232 (268)
T cd05086 156 ETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDRE-VLNHVIKD--QQVKLFKP 232 (268)
T ss_pred hcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHhh--cccccCCC
Confidence 11234578899999998743 245789999999999999997 466886443322 22111111 11112222
Q ss_pred cccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 003296 789 NVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLL 830 (833)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~ 830 (833)
.+... ....+.+++..|| .+|++||+++||++.|.
T Consensus 233 ~~~~~------~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 233 QLELP------YSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred ccCCC------CcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 22211 2345677888999 67999999999999874
No 203
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.1e-38 Score=338.35 Aligned_cols=269 Identities=20% Similarity=0.269 Sum_probs=202.0
Q ss_pred HhcCCccccccCcccEEEEEEc-----CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecC--
Q 003296 555 AVANPLNVELKTRFSTYYKAVM-----PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS-- 627 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~-- 627 (833)
..|...+.||+|+||.||+|.. .++..||+|.++.... ....+.|.+|++++++++||||+++++++...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG---GNHIADLKKEIEILRNLYHENIVKYKGICTEDGG 80 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCcccc---HHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCC
Confidence 3467788999999999999973 3678999999852211 22346799999999999999999999999875
Q ss_pred CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceee
Q 003296 628 DSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELC 707 (833)
Q Consensus 628 ~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~ 707 (833)
...++||||+++|+|.+++... ...++|.++..++.|++.||+|+| +.+|+||||||+||+++.++.+|++|||++
T Consensus 81 ~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~i~~~i~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~ 156 (284)
T cd05079 81 NGIKLIMEFLPSGSLKEYLPRN-KNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLT 156 (284)
T ss_pred CceEEEEEccCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccchheEEEcCCCCEEECCCccc
Confidence 5689999999999999999753 235899999999999999999999 889999999999999999999999999999
Q ss_pred eeeCCCCCC-CccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccc---
Q 003296 708 KVIDPSKST-GSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLD--- 783 (833)
Q Consensus 708 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--- 783 (833)
+........ .......|+..|+|||+..+..++.++|||||||++|||+|++.|......................
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05079 157 KAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLV 236 (284)
T ss_pred cccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHH
Confidence 876432211 1112356778899999998888999999999999999999988765321110000000000000000
Q ss_pred ccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 784 HILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 784 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
..+...... +.....+.++.+++.+|++.+|++|||+.|+++.++++
T Consensus 237 ~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 237 RVLEEGKRL--PRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHHcCccC--CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 000000000 00112356788999999999999999999999999875
No 204
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=2e-38 Score=330.92 Aligned_cols=250 Identities=20% Similarity=0.280 Sum_probs=202.9
Q ss_pred cCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEe
Q 003296 557 ANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYE 635 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 635 (833)
|+..+.||+|+||.||++... +++.||+|.++.... ....+.+.+|+.++++++||||+++++++.+++..|+|||
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (255)
T cd08219 2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS---SSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVME 78 (255)
T ss_pred ceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc---hHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence 667789999999999999974 789999999842211 2235678899999999999999999999999999999999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCC
Q 003296 636 YAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715 (833)
Q Consensus 636 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~ 715 (833)
|+++|+|.+++.......+++.....++.|++.||.||| +.+|+|+||||+||++++++.++++|||.++.......
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~ 155 (255)
T cd08219 79 YCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIH---EKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA 155 (255)
T ss_pred eCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEECCCCcEEEcccCcceeeccccc
Confidence 999999999987644556899999999999999999999 78999999999999999999999999999987643221
Q ss_pred CCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCch
Q 003296 716 TGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSL 795 (833)
Q Consensus 716 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (833)
......|++.|+|||++.+..++.++|||||||++|||++|+.||..... ........ . ..... ..
T Consensus 156 --~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~-~~~~~~~~-~-~~~~~-----~~---- 221 (255)
T cd08219 156 --YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW-KNLILKVC-Q-GSYKP-----LP---- 221 (255)
T ss_pred --ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH-HHHHHHHh-c-CCCCC-----CC----
Confidence 12346789999999999888899999999999999999999999975432 21111111 1 11100 00
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 796 AVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 796 ~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
......+.+++.+||+.||++||++.|++..
T Consensus 222 --~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 222 --SHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred --cccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 1223467799999999999999999999864
No 205
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=2.3e-38 Score=333.24 Aligned_cols=257 Identities=18% Similarity=0.272 Sum_probs=201.8
Q ss_pred HhcCCccccccCcccEEEEEEcC-CC---ceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCce
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP-SG---MSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSA 630 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~ 630 (833)
++|+..+.||+|+||.||+|... +| ..||||++.... .....++|..|++++++++||||+++++++..++..
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 80 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY---TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPV 80 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC---CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCce
Confidence 35777899999999999999974 33 369999984221 122346899999999999999999999999999999
Q ss_pred EEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeee
Q 003296 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVI 710 (833)
Q Consensus 631 ~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~ 710 (833)
++||||+++|+|.+++... ...+++.+++.++.|++.|++||| +.+++||||||+||+++.++.+|++|||+++..
T Consensus 81 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~l~~al~~lH---~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~ 156 (269)
T cd05065 81 MIITEFMENGALDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRFL 156 (269)
T ss_pred EEEEecCCCCcHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccChheEEEcCCCcEEECCCcccccc
Confidence 9999999999999999753 346899999999999999999999 789999999999999999999999999998765
Q ss_pred CCCCCCCcccc-c--cccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccc
Q 003296 711 DPSKSTGSLST-V--AGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHIL 786 (833)
Q Consensus 711 ~~~~~~~~~~~-~--~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (833)
........... . .++..|+|||++.+..++.++|||||||++|||++ |..||....... ...... ....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~-~~~~i~-~~~~----- 229 (269)
T cd05065 157 EDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD-VINAIE-QDYR----- 229 (269)
T ss_pred ccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHH-HHHHHH-cCCc-----
Confidence 43221111111 1 12457999999998889999999999999999886 999997543221 111111 1000
Q ss_pred cccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 787 DFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
... ..+.+..+.+++.+||+.+|++||++++|+..|+++
T Consensus 230 ---~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 230 ---LPP----PMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred ---CCC----cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 000 012345678899999999999999999999999875
No 206
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2e-38 Score=343.30 Aligned_cols=262 Identities=15% Similarity=0.188 Sum_probs=195.0
Q ss_pred CccccccC--cccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEe
Q 003296 559 PLNVELKT--RFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYE 635 (833)
Q Consensus 559 ~~~~ig~g--~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 635 (833)
..++||+| +||+||++.. ++|+.||||++..... .....+.+.+|+++++.++|||||+++++|..++..++|||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 79 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC--TNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTS 79 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhc--cHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEe
Confidence 35689999 7889999987 5899999999942211 11223567789999999999999999999999999999999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCC
Q 003296 636 YAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715 (833)
Q Consensus 636 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~ 715 (833)
|+++|+|.+++.......+++..++.++.|++.||+||| +.+|+||||||+||+++.++.++++|||.+........
T Consensus 80 ~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~ 156 (327)
T cd08227 80 FMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQ 156 (327)
T ss_pred ccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCChhhEEEecCCcEEEcccchhhccccccc
Confidence 999999999997544456899999999999999999999 78899999999999999999999999986543321110
Q ss_pred -C----CccccccccccccccccccC--CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccccccc-
Q 003296 716 -T----GSLSTVAGSVGYIPPEYAYT--MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILD- 787 (833)
Q Consensus 716 -~----~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~- 787 (833)
. .......++..|+|||++.+ ..++.++|||||||++|||++|+.||....... ....... .......+
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~--~~~~~~~~~ 233 (327)
T cd08227 157 RLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ-MLLEKLN--GTVPCLLDT 233 (327)
T ss_pred cccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhH-HHHHHhc--CCccccccc
Confidence 0 00122457788999999875 458999999999999999999999997432211 1111000 00000000
Q ss_pred ------------------ccc--------c-------CCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 788 ------------------FNV--------S-------RTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 788 ------------------~~~--------~-------~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
... . ...........++.+++.+||+.||++|||++|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 234 TTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred cchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 000 0 0000111234578899999999999999999999874
No 207
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.3e-38 Score=339.72 Aligned_cols=259 Identities=20% Similarity=0.253 Sum_probs=201.8
Q ss_pred HHhcCCccccccCcccEEEEEEcC--------CCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEE
Q 003296 554 EAVANPLNVELKTRFSTYYKAVMP--------SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYV 624 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~ 624 (833)
.+.|...+.||+|+||.||+|... .+..||+|+++.... .....++.+|+++++++ +|||||+++++|
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 87 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT---DKDLADLISEMELMKLIGKHKNIINLLGVC 87 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCC---hHHHHHHHHHHHHHHhccCCCCeeeEEEEE
Confidence 356778899999999999999741 346799999842211 12245789999999999 699999999999
Q ss_pred ecCCceEEEEeeCCCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccc
Q 003296 625 LASDSAYLFYEYAPKGTLFDVLHGCL--------------ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRN 690 (833)
Q Consensus 625 ~~~~~~~lv~ey~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~N 690 (833)
..++..++||||+++|+|.+++.... ...++|.++..++.|++.||.||| +.+|+||||||+|
T Consensus 88 ~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~N 164 (314)
T cd05099 88 TQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLE---SRRCIHRDLAARN 164 (314)
T ss_pred ccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeecccccee
Confidence 99999999999999999999997532 135899999999999999999999 7899999999999
Q ss_pred eeeCCCCCceeccceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHH
Q 003296 691 IFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELA 769 (833)
Q Consensus 691 ill~~~~~~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~ 769 (833)
|++++++.+|++|||+++...............++..|||||++.+..++.++|||||||++|||++ |..||..... .
T Consensus 165 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~-~ 243 (314)
T cd05099 165 VLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV-E 243 (314)
T ss_pred EEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH-H
Confidence 9999999999999999986643221111122334568999999988889999999999999999999 8899864322 2
Q ss_pred HHHHHhhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 770 KWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
...... ...... + .. ...+.++.+++.+||+.||++|||+.|+++.|+++
T Consensus 244 ~~~~~~-~~~~~~----~--~~------~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~ 293 (314)
T cd05099 244 ELFKLL-REGHRM----D--KP------SNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKV 293 (314)
T ss_pred HHHHHH-HcCCCC----C--CC------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 211111 111100 0 00 12234677999999999999999999999998864
No 208
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.8e-38 Score=346.22 Aligned_cols=263 Identities=17% Similarity=0.192 Sum_probs=198.5
Q ss_pred HHHHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecC---
Q 003296 552 AMEAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS--- 627 (833)
Q Consensus 552 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~--- 627 (833)
...+.|...+.||+|+||.||+|.. .+++.||||++.... ......+.+.+|++++++++|||||++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPF--QSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSI 89 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchh--hhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccc
Confidence 3456788889999999999999996 578999999984321 1122345688999999999999999999988643
Q ss_pred ---CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccc
Q 003296 628 ---DSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDI 704 (833)
Q Consensus 628 ---~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~df 704 (833)
...|++|||+ +++|.++++. ..+++..+..++.|++.||+||| +.+|+||||||+||++++++.+||+||
T Consensus 90 ~~~~~~~~~~~~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Df 162 (343)
T cd07878 90 ENFNEVYLVTNLM-GADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDF 162 (343)
T ss_pred cccCcEEEEeecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecccCChhhEEECCCCCEEEcCC
Confidence 3579999998 7799988763 45899999999999999999999 789999999999999999999999999
Q ss_pred eeeeeeCCCCCCCccccccccccccccccccC-CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccc
Q 003296 705 ELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLD 783 (833)
Q Consensus 705 gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 783 (833)
|+++..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+...................
T Consensus 163 g~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 237 (343)
T cd07878 163 GLARQADDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSP 237 (343)
T ss_pred ccceecCCC-----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 999865432 234679999999999876 56899999999999999999999999754432222111100000000
Q ss_pred cccc-----------ccccCCc-hh----HHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 784 HILD-----------FNVSRTS-LA----VRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 784 ~~~~-----------~~~~~~~-~~----~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.... ....... .. .......+.+++.+|++.||++|||+.|++.|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 238 EVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred HHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000 0000000 00 00122357799999999999999999999875
No 209
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=2e-38 Score=333.74 Aligned_cols=251 Identities=21% Similarity=0.314 Sum_probs=197.7
Q ss_pred cccccCcccEEEEEEcCC-------CceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 561 NVELKTRFSTYYKAVMPS-------GMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
+.||+|+||.||+|+..+ ++.||||.+.... .......|.+|++++++++||||++++++|...+..++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 77 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA---TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYII 77 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc---chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEE
Confidence 368999999999998632 3679999884221 112356799999999999999999999999999999999
Q ss_pred EeeCCCCChhhhhhcCC-----CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCC-----Cceecc
Q 003296 634 YEYAPKGTLFDVLHGCL-----ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLK-----EPQIGD 703 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~-----~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~-----~~ki~d 703 (833)
|||+++|+|.+++.... ...++|.+++.++.|++.|++||| +.+++|+||||+||+++.++ .+|++|
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~~~~~l~d 154 (269)
T cd05044 78 MELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLE---QMHFIHRDLAARNCLVSEKGYDADRVVKIGD 154 (269)
T ss_pred EeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHH---hCCcccCCCChheEEEecCCCCCCcceEECC
Confidence 99999999999997532 234889999999999999999999 78899999999999999877 899999
Q ss_pred ceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccc
Q 003296 704 IELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKL 782 (833)
Q Consensus 704 fgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 782 (833)
||+++...............++..|+|||++.+..++.++|||||||++|||+| |+.||....... .... .......
T Consensus 155 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~-~~~~-~~~~~~~ 232 (269)
T cd05044 155 FGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE-VLQH-VTAGGRL 232 (269)
T ss_pred cccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHH-HHHH-HhcCCcc
Confidence 999976543222111123356788999999998889999999999999999998 999997543322 1111 1110000
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 003296 783 DHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831 (833)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~ 831 (833)
. .....+..+.+++.+||+.+|++||++.||++.|++
T Consensus 233 --------~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 233 --------Q----KPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred --------C----CcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 0 011234577899999999999999999999999874
No 210
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=3.7e-38 Score=331.26 Aligned_cols=257 Identities=17% Similarity=0.261 Sum_probs=203.3
Q ss_pred HhcCCccccccCcccEEEEEEcC----CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCce
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP----SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSA 630 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~ 630 (833)
++|+..+.||+|+||.||+|+.. .+..||+|.++.... ....+.|.+|+.++++++||||+++++++..++..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYT---EKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPV 80 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCC---HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCcc
Confidence 46788899999999999999863 234799999843211 12346899999999999999999999999999999
Q ss_pred EEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeee
Q 003296 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVI 710 (833)
Q Consensus 631 ~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~ 710 (833)
|+||||+++|+|.+++... ...+++.++..++.|++.|++||| +.+++||||||+||+++.++.+|++|||+++..
T Consensus 81 ~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd05066 81 MIVTEYMENGSLDAFLRKH-DGQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVL 156 (267)
T ss_pred EEEEEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCEeehhhchhcEEECCCCeEEeCCCCccccc
Confidence 9999999999999999753 245899999999999999999999 789999999999999999999999999999876
Q ss_pred CCCCCCC-ccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccc
Q 003296 711 DPSKSTG-SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDF 788 (833)
Q Consensus 711 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (833)
....... ......++..|+|||++.+..++.++|||||||++||+++ |+.||.+...... ..... ....
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~-~~~~~-~~~~------- 227 (267)
T cd05066 157 EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDV-IKAIE-EGYR------- 227 (267)
T ss_pred ccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHH-HHHHh-CCCc-------
Confidence 4322111 1112334578999999998889999999999999999886 9999975432211 11111 1000
Q ss_pred cccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 789 NVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
.+.. ...+..+.+++.+|++.+|++||+|.++++.|+++
T Consensus 228 -~~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 228 -LPAP----MDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred -CCCC----CCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 0000 12245678999999999999999999999999875
No 211
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=3.8e-38 Score=331.59 Aligned_cols=253 Identities=21% Similarity=0.205 Sum_probs=188.8
Q ss_pred ccccCcccEEEEEEcCC---CceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEeeCC
Q 003296 562 VELKTRFSTYYKAVMPS---GMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAP 638 (833)
Q Consensus 562 ~ig~g~~g~vy~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey~~ 638 (833)
.||+|+||.||+|...+ ...+|+|.+.... .......|.+|++++++++||||++++++|...+..++||||++
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASA---TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCP 78 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccC---ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCC
Confidence 58999999999997543 4568888774221 12234578999999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCC---CCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCC
Q 003296 639 KGTLFDVLHGCLE---NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715 (833)
Q Consensus 639 ~g~L~~~l~~~~~---~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~ 715 (833)
+|+|.+++..... ...++.....++.|++.|++||| +.+|+||||||+||++++++.+|++|||+++.......
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~ 155 (269)
T cd05042 79 LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLH---QADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDY 155 (269)
T ss_pred CCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHH---hcCEecccccHhheEecCCCcEEEeccccccccccchh
Confidence 9999999976432 23578888999999999999999 78999999999999999999999999999875432221
Q ss_pred CCcccccccccccccccccc-------CCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhccccccccccc
Q 003296 716 TGSLSTVAGSVGYIPPEYAY-------TMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILD 787 (833)
Q Consensus 716 ~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (833)
........+++.|+|||+.. ...++.++|||||||++|||++ |+.||................ ......
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~---~~~~~~ 232 (269)
T cd05042 156 YITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQ---DIKLPK 232 (269)
T ss_pred eeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhcc---CccCCC
Confidence 11112345678899999864 2356889999999999999999 788886543322111111111 001111
Q ss_pred ccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 003296 788 FNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLL 830 (833)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~ 830 (833)
+... ......+.+++..|+ .||++|||++||++.|.
T Consensus 233 ~~~~------~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 233 PQLD------LKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred Cccc------ccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 1111 122345567788888 59999999999999874
No 212
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=3.4e-38 Score=334.39 Aligned_cols=252 Identities=15% Similarity=0.206 Sum_probs=199.5
Q ss_pred HhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
+.|+..+.||+|+||.||+|... ++..+|+|.+.... ....+.|.+|++++++++||||++++++|..++..++|
T Consensus 5 ~~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v 80 (282)
T cd06643 5 EFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS----EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWIL 80 (282)
T ss_pred HHHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC----HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEE
Confidence 34566788999999999999975 68889999984222 12346789999999999999999999999999999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
|||+++|+|.+++.+. ...++|..+..++.|+++||.||| +.+|+||||||+||+++.++.+|++|||++......
T Consensus 81 ~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~~L~~LH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~ 156 (282)
T cd06643 81 IEFCAGGAVDAVMLEL-ERPLTEPQIRVVCKQTLEALNYLH---ENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT 156 (282)
T ss_pred EEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEccCCCEEEcccccccccccc
Confidence 9999999999988642 346899999999999999999999 789999999999999999999999999998765322
Q ss_pred CCCCcccccccccccccccccc-----CCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccc
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAY-----TMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDF 788 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (833)
. .......||+.|+|||++. +..++.++|||||||++|||++|+.||................ . ...
T Consensus 157 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~--~-~~~--- 228 (282)
T cd06643 157 I--QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSE--P-PTL--- 228 (282)
T ss_pred c--cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcC--C-CCC---
Confidence 1 1223467899999999874 3457889999999999999999999997544322211111100 0 000
Q ss_pred cccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 789 NVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.. ......++.+++.+||+.||.+||++.+++++
T Consensus 229 --~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 229 --AQ----PSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred --CC----ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 01223467899999999999999999999865
No 213
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=3.5e-38 Score=329.47 Aligned_cols=250 Identities=22% Similarity=0.307 Sum_probs=199.0
Q ss_pred cccccCcccEEEEEEcC--CC--ceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEee
Q 003296 561 NVELKTRFSTYYKAVMP--SG--MSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEY 636 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey 636 (833)
+.||+|+||.||+|.+. ++ ..||||.+..... . ...++|.+|++++++++|||||++++++.. ...++||||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~-~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~ 76 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKL-S--DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTEL 76 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCccc-H--HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEe
Confidence 46899999999999874 23 3699999953221 1 345789999999999999999999999988 889999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCC
Q 003296 637 APKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKST 716 (833)
Q Consensus 637 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~ 716 (833)
+++|+|.+++.......++|.....++.|++.||+||| ..+++||||||+||+++.++.+|++|||+++........
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 153 (257)
T cd05040 77 APLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLE---SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH 153 (257)
T ss_pred cCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHH---hCCccccccCcccEEEecCCEEEeccccccccccccccc
Confidence 99999999998643356899999999999999999999 789999999999999999999999999999876432211
Q ss_pred -CccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccccccCCc
Q 003296 717 -GSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTS 794 (833)
Q Consensus 717 -~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (833)
.......++..|+|||++.+..++.++|||||||++|||++ |+.||....... ............ ..
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-~~~~~~~~~~~~--------~~-- 222 (257)
T cd05040 154 YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ-ILKKIDKEGERL--------ER-- 222 (257)
T ss_pred eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHhcCCcC--------CC--
Confidence 11123567889999999988889999999999999999999 999996443222 111111110000 00
Q ss_pred hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 003296 795 LAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLL 830 (833)
Q Consensus 795 ~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~ 830 (833)
....+..+.+++.+|++.+|++||++.|+++.|.
T Consensus 223 --~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 223 --PEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred --CccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 0123457889999999999999999999999885
No 214
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-39 Score=339.10 Aligned_cols=251 Identities=18% Similarity=0.274 Sum_probs=207.6
Q ss_pred CccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEeeC
Q 003296 559 PLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYA 637 (833)
Q Consensus 559 ~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey~ 637 (833)
..+.+|-|.||.||.|+++ ....||||.++.. .-..++|.+|+.+|+.++|||+|+++|+|..+..+|||.|||
T Consensus 271 MkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-----tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM 345 (1157)
T KOG4278|consen 271 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFM 345 (1157)
T ss_pred eeeccCCCcccceeeeeeeccceeeehhhhhhc-----chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecc
Confidence 4578999999999999986 5688999999422 234689999999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCC
Q 003296 638 PKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG 717 (833)
Q Consensus 638 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~ 717 (833)
..|+|.+||+++....++.-..+.+|.||+.|+.||. ...+||||+...|+|+.++..+||+|||+++++..+..+.
T Consensus 346 ~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLE---kknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTA 422 (1157)
T KOG4278|consen 346 CYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTA 422 (1157)
T ss_pred cCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHH---HhhhhhhhhhhhhccccccceEEeeccchhhhhcCCceec
Confidence 9999999999887777888888899999999999999 8899999999999999999999999999999987544322
Q ss_pred ccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccccccCCchh
Q 003296 718 SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLA 796 (833)
Q Consensus 718 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (833)
. .+..=.+.|.|||-+....++.|+|||+|||+|||+.| |-.||.+- ++.+. ......+.+++ .
T Consensus 423 H-AGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGi-dlSqV-Y~LLEkgyRM~------------~ 487 (1157)
T KOG4278|consen 423 H-AGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQV-YGLLEKGYRMD------------G 487 (1157)
T ss_pred c-cCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCc-cHHHH-HHHHhcccccc------------C
Confidence 1 12223567999999998899999999999999999987 88888643 33221 11121211111 1
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 797 VRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 797 ~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
+..+++.+.+|+..||++.|.+||+++|+-+.++.+
T Consensus 488 PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtm 523 (1157)
T KOG4278|consen 488 PEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETM 523 (1157)
T ss_pred CCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHH
Confidence 234567888999999999999999999999988754
No 215
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=4e-38 Score=331.54 Aligned_cols=249 Identities=25% Similarity=0.314 Sum_probs=194.0
Q ss_pred cccccCcccEEEEEEcC-CCc--eEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEecCCceEEEEee
Q 003296 561 NVELKTRFSTYYKAVMP-SGM--SYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVLASDSAYLFYEY 636 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~ey 636 (833)
++||+|+||.||+|.+. +|. .+|+|.++... .....+.|.+|+++++++ +||||++++++|...+..++||||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~ 77 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA---SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEY 77 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccC---CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEe
Confidence 46899999999999974 444 46888884211 112346789999999999 799999999999999999999999
Q ss_pred CCCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceec
Q 003296 637 APKGTLFDVLHGCL--------------ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIG 702 (833)
Q Consensus 637 ~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~ 702 (833)
+++|+|.++++... ...+++.++..++.|++.|++||| +.+++||||||+||++++++.+|++
T Consensus 78 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nili~~~~~~kl~ 154 (270)
T cd05047 78 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIA 154 (270)
T ss_pred CCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccccceEEEcCCCeEEEC
Confidence 99999999997532 124789999999999999999999 7899999999999999999999999
Q ss_pred cceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhccccc
Q 003296 703 DIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDK 781 (833)
Q Consensus 703 dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 781 (833)
|||+++...... .......+..|+|||++....++.++|||||||++|||++ |+.||.+... ....... .....
T Consensus 155 dfgl~~~~~~~~---~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~-~~~~~~~-~~~~~ 229 (270)
T cd05047 155 DFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-AELYEKL-PQGYR 229 (270)
T ss_pred CCCCccccchhh---hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH-HHHHHHH-hCCCC
Confidence 999986332111 1112234667999999988889999999999999999997 9999964332 1111111 11011
Q ss_pred ccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 782 LDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
.+ .. .....++.+++.+||+.||.+|||+.|+++.|+++
T Consensus 230 ~~------~~------~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~ 268 (270)
T cd05047 230 LE------KP------LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 268 (270)
T ss_pred CC------CC------CcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence 00 00 11234678999999999999999999999999865
No 216
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=2e-38 Score=331.96 Aligned_cols=239 Identities=15% Similarity=0.245 Sum_probs=187.7
Q ss_pred cccccCcccEEEEEEcCC-------------CceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecC
Q 003296 561 NVELKTRFSTYYKAVMPS-------------GMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS 627 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~ 627 (833)
+.||+|+||.||+|...+ ...||+|.+.... ....+.|.+|+.++++++|||||++++++..+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~----~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~ 76 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH----RDISLAFFETASMMRQVSHKHIVLLYGVCVRD 76 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh----hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence 368999999999998532 2358899874221 22346789999999999999999999999999
Q ss_pred CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCC-------ce
Q 003296 628 DSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKE-------PQ 700 (833)
Q Consensus 628 ~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~-------~k 700 (833)
...++||||+++|+|..+++.. ...+++..+..++.|+++||+||| +.+|+||||||+|||++.++. +|
T Consensus 77 ~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~~~~~~~~~ 152 (262)
T cd05077 77 VENIMVEEFVEFGPLDLFMHRK-SDVLTTPWKFKVAKQLASALSYLE---DKDLVHGNVCTKNILLAREGIDGECGPFIK 152 (262)
T ss_pred CCCEEEEecccCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhh---hCCeECCCCCcccEEEecCCccCCCCceeE
Confidence 9999999999999999988753 345899999999999999999999 789999999999999987664 79
Q ss_pred eccceeeeeeCCCCCCCcccccccccccccccccc-CCcccccCcchhhHHHHHHHH-hCCCcccCCccHHHHHHHhhcc
Q 003296 701 IGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAY-TMRVTMAGNVYSFGVILLELL-TGKTAVNQGNELAKWVLRNSAQ 778 (833)
Q Consensus 701 i~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~S~Gvvl~ell-tg~~p~~~~~~~~~~~~~~~~~ 778 (833)
++|||++...... ....|+..|||||++. +..++.++|||||||++|||+ +|+.||....... .. .....
T Consensus 153 l~d~g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-~~-~~~~~ 224 (262)
T cd05077 153 LSDPGIPITVLSR------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE-KE-RFYEG 224 (262)
T ss_pred eCCCCCCccccCc------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH-HH-HHHhc
Confidence 9999998654321 2356889999999886 466899999999999999998 5888886432111 10 00000
Q ss_pred cccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 003296 779 QDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRML 829 (833)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L 829 (833)
. ..... ....++.+++.+||+.||++||++.||++++
T Consensus 225 --~--------~~~~~----~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 225 --Q--------CMLVT----PSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred --C--------ccCCC----CChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 0 00000 1134678999999999999999999999876
No 217
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.6e-38 Score=360.17 Aligned_cols=262 Identities=15% Similarity=0.150 Sum_probs=193.7
Q ss_pred HHHHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCC------CcccceEEE
Q 003296 552 AMEAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNS------NVMTPLAYV 624 (833)
Q Consensus 552 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~------niv~~~~~~ 624 (833)
..+..|+..+.||+|+||+||+|+. .+++.||||+++... ...+++..|++++++++|. ++++++++|
T Consensus 126 ~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~ 200 (467)
T PTZ00284 126 VSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-----KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF 200 (467)
T ss_pred cCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-----hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence 3456788999999999999999997 468899999994221 1234566788887777654 588899988
Q ss_pred ecC-CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCC------
Q 003296 625 LAS-DSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLK------ 697 (833)
Q Consensus 625 ~~~-~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~------ 697 (833)
..+ +..|+||||+ +++|.+++.+ ...+++..+..|+.|++.||+|||+ ..+||||||||+|||++.++
T Consensus 201 ~~~~~~~~iv~~~~-g~~l~~~l~~--~~~l~~~~~~~i~~qi~~aL~yLH~--~~gIiHrDlKP~NILl~~~~~~~~~~ 275 (467)
T PTZ00284 201 QNETGHMCIVMPKY-GPCLLDWIMK--HGPFSHRHLAQIIFQTGVALDYFHT--ELHLMHTDLKPENILMETSDTVVDPV 275 (467)
T ss_pred EcCCceEEEEEecc-CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHh--cCCeecCCCCHHHEEEecCCcccccc
Confidence 765 5689999998 7799998875 3568999999999999999999993 25899999999999998765
Q ss_pred ----------CceeccceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCcc
Q 003296 698 ----------EPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNE 767 (833)
Q Consensus 698 ----------~~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~ 767 (833)
.+||+|||.+..... .....+||+.|||||++.+..|+.++|||||||++|||++|+.||.+...
T Consensus 276 ~~~~~~~~~~~vkl~DfG~~~~~~~-----~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~ 350 (467)
T PTZ00284 276 TNRALPPDPCRVRICDLGGCCDERH-----SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDN 350 (467)
T ss_pred cccccCCCCceEEECCCCccccCcc-----ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh
Confidence 489999998764321 22457899999999999999999999999999999999999999986554
Q ss_pred HHHHHHHhhcccc----------------------cccccccccc----cC-CchhHHHHHHHHHHHHHhccCCCCCCCC
Q 003296 768 LAKWVLRNSAQQD----------------------KLDHILDFNV----SR-TSLAVRSQMLTVLKVAVACVSVSPEARP 820 (833)
Q Consensus 768 ~~~~~~~~~~~~~----------------------~~~~~~~~~~----~~-~~~~~~~~~~~~~~l~~~cl~~dP~~Rp 820 (833)
...+.......+. .+....++.. .. ...........+.+|+.+||+.||++||
T Consensus 351 ~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ 430 (467)
T PTZ00284 351 LEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRL 430 (467)
T ss_pred HHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCC
Confidence 3222111000000 0000000000 00 0000001134577999999999999999
Q ss_pred CHHHHHHH
Q 003296 821 KMKSVLRM 828 (833)
Q Consensus 821 s~~evl~~ 828 (833)
|++|+++|
T Consensus 431 ta~e~L~H 438 (467)
T PTZ00284 431 NARQMTTH 438 (467)
T ss_pred CHHHHhcC
Confidence 99999975
No 218
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=2.9e-38 Score=335.53 Aligned_cols=265 Identities=18% Similarity=0.210 Sum_probs=200.2
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
+|+..+.||+|+||.||+|+.. +|+.||||++.... ......+.+.+|++++++++||||+++++++..++..|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLES--EEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIF 78 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEecccc--ccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEE
Confidence 3667789999999999999974 79999999984221 12233467889999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCC-CCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 635 EYAPKGTLFDVLHGCLE-NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
||++ |+|.+++..... ..+++..+..++.|+++||+||| ..+|+||||||+||++++++.+||+|||+++.....
T Consensus 79 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 154 (285)
T cd07861 79 EFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCH---SRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIP 154 (285)
T ss_pred ecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEEcCCCcEEECcccceeecCCC
Confidence 9997 689998875332 56899999999999999999999 789999999999999999999999999999865432
Q ss_pred CCCCccccccccccccccccccCC-cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccc-------ccc
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTM-RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKL-------DHI 785 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~-------~~~ 785 (833)
.. ......|++.|+|||++.+. .++.++|||||||++|||+||+.||.+.................. ...
T Consensus 155 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (285)
T cd07861 155 VR--VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSL 232 (285)
T ss_pred cc--cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhh
Confidence 21 12334678999999987654 578999999999999999999999976543322211100000000 000
Q ss_pred cc--ccccC---C--chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 786 LD--FNVSR---T--SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 786 ~~--~~~~~---~--~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.+ ..... . .........++.+++.+||+.||++|||++||+.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 233 PDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred HHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 00 00000 0 00001134567899999999999999999999864
No 219
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=9e-38 Score=326.93 Aligned_cols=254 Identities=19% Similarity=0.276 Sum_probs=204.6
Q ss_pred HHhcCCccccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 554 EAVANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
.+.|...+.||+|+||.||+|...++..+|+|.+.... ...+.|.+|++++++++|+||+++++++.. ...++|
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v 78 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-----MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYII 78 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-----hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEE
Confidence 34677889999999999999998888889999984221 124679999999999999999999999887 788999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
|||+++|+|.+++.+.....++|.++..++.|++.||+||| ..+++||||||+||+++.++.+|++|||.+......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 155 (260)
T cd05073 79 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDN 155 (260)
T ss_pred EEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCCcceeeccCC
Confidence 99999999999998654556899999999999999999999 778999999999999999999999999999866432
Q ss_pred CCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccccccC
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSR 792 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 792 (833)
... ......++..|+|||++....++.++|||||||++||++| |+.||......... .. ....... ..
T Consensus 156 ~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~-~~-~~~~~~~--------~~ 224 (260)
T cd05073 156 EYT-AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI-RA-LERGYRM--------PR 224 (260)
T ss_pred Ccc-cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHH-HH-HhCCCCC--------CC
Confidence 211 1123346678999999988889999999999999999999 89999754322111 11 1110000 00
Q ss_pred CchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 003296 793 TSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831 (833)
Q Consensus 793 ~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~ 831 (833)
....+.++.+++.+|++.+|++||++.++.+.|+.
T Consensus 225 ----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 225 ----PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred ----cccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 01234578899999999999999999999999975
No 220
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=6.3e-38 Score=327.55 Aligned_cols=252 Identities=24% Similarity=0.311 Sum_probs=202.6
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecC-CceEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS-DSAYLF 633 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~-~~~~lv 633 (833)
+|+..+.+|+|+||.||++... +++.||+|++... . ......+.+.+|++++++++|||++++++.+... ...|+|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~-~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv 78 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLR-N-ASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIV 78 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehh-h-cCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEE
Confidence 3677889999999999999974 6789999998421 1 1122356789999999999999999999988654 467999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
|||+++|+|.+++.......+++.++..++.|++.|++||| +.+|+||||||+||+++.++.++++|||+++.....
T Consensus 79 ~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH---~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~ 155 (257)
T cd08223 79 MGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLH---EKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ 155 (257)
T ss_pred ecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCchhEEEecCCcEEEecccceEEeccc
Confidence 99999999999998654556899999999999999999999 789999999999999999999999999999876432
Q ss_pred CCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCC
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRT 793 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (833)
.. ......|++.|+|||+..+..++.++|||||||++|||++|+.||..... ......... .... ..
T Consensus 156 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~-~~~~~~~~~--~~~~-----~~--- 222 (257)
T cd08223 156 CD--MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM-NSLVYRIIE--GKLP-----PM--- 222 (257)
T ss_pred CC--ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-HHHHHHHHh--cCCC-----CC---
Confidence 21 22346789999999999988899999999999999999999999975432 222211111 1110 00
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 794 SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 794 ~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
......++.+++.+|++.||++|||+.|++++
T Consensus 223 ---~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 223 ---PKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred ---ccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 11234578899999999999999999999875
No 221
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=2.9e-38 Score=338.15 Aligned_cols=264 Identities=16% Similarity=0.226 Sum_probs=199.9
Q ss_pred HhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
+.|...+.||+|+||.||+|... +++.||+|.+.... .......+.+|++++++++||||+++++++..++..++|
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 82 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEH---EEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLV 82 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccc---ccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEE
Confidence 35777889999999999999975 78999999984221 122345688999999999999999999999999999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
|||++ ++|.+++... ...+++..+..++.|+++||+||| +.+|+||||||+||++++++.+|++|||+++.....
T Consensus 83 ~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 157 (301)
T cd07873 83 FEYLD-KDLKQYLDDC-GNSINMHNVKLFLFQLLRGLNYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSIP 157 (301)
T ss_pred Eeccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCC
Confidence 99997 5999988754 345889999999999999999999 789999999999999999999999999998765322
Q ss_pred CCCCccccccccccccccccccCC-cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHH--hhcc--cccccccccc
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTM-RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLR--NSAQ--QDKLDHILDF 788 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~--~~~~--~~~~~~~~~~ 788 (833)
.. ......+++.|+|||++.+. .++.++|||||||++|||+||+.||........+... .... ......+.+.
T Consensus 158 ~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (301)
T cd07873 158 TK--TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSN 235 (301)
T ss_pred CC--cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcc
Confidence 21 12345678999999987653 4788999999999999999999999754432222111 1000 0000011000
Q ss_pred ------cccC---Cch--hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 789 ------NVSR---TSL--AVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 789 ------~~~~---~~~--~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
..+. ... ........+.+++.+|++.||.+|||++|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 236 EEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred ccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0000 000 001224467899999999999999999999874
No 222
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.2e-38 Score=331.75 Aligned_cols=253 Identities=16% Similarity=0.213 Sum_probs=199.4
Q ss_pred HhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
++|...+.||+|+||.||+|+. .+++.||+|.++... ......+.+|+.+++.++||||+++++++...+..++|
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~----~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv 84 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP----GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWIC 84 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc----hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Confidence 4566678899999999999996 478999999984221 12235688999999999999999999999999999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
|||+++|+|.++++. ...+++.+...++.|++.|+.||| ..+|+||||||+||+++.++.+|++|||++......
T Consensus 85 ~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06645 85 MEFCGGGSLQDIYHV--TGPLSESQIAYVSRETLQGLYYLH---SKGKMHRDIKGANILLTDNGHVKLADFGVSAQITAT 159 (267)
T ss_pred EeccCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECcceeeeEccCc
Confidence 999999999999875 346899999999999999999999 778999999999999999999999999998766432
Q ss_pred CCCCcccccccccccccccccc---CCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccc
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAY---TMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNV 790 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (833)
.. ......||+.|+|||++. ...++.++|||||||++|||++|+.||............. .. . .. .+..
T Consensus 160 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~-~~-~-~~---~~~~ 231 (267)
T cd06645 160 IA--KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMT-KS-N-FQ---PPKL 231 (267)
T ss_pred cc--ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhh-cc-C-CC---CCcc
Confidence 21 223457999999999874 4558899999999999999999999986443322111110 00 0 00 0000
Q ss_pred cCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 791 SRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 791 ~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.. ....+..+.+++.+|++.+|++||+++||+++
T Consensus 232 ~~----~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 232 KD----KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred cc----cCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 00 00123457789999999999999999999865
No 223
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.5e-38 Score=335.18 Aligned_cols=239 Identities=17% Similarity=0.254 Sum_probs=186.3
Q ss_pred ccccCcccEEEEEEcC-------------------------CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCC
Q 003296 562 VELKTRFSTYYKAVMP-------------------------SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSN 616 (833)
Q Consensus 562 ~ig~g~~g~vy~~~~~-------------------------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n 616 (833)
.||+|+||.||+|+.. ....||+|.+.... .....+|.+|++++++++|||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~----~~~~~~~~~~~~~~~~l~h~n 77 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH----RDIALAFFETASLMSQVSHIH 77 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH----HHHHHHHHHHHHHHhcCCCCC
Confidence 6899999999999742 11358899884221 122467899999999999999
Q ss_pred cccceEEEecCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCC
Q 003296 617 VMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSL 696 (833)
Q Consensus 617 iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~ 696 (833)
||+++++|..++..++||||+++|+|.+++... ...+++..+..++.|+++||+||| +.+|+||||||+||++++.
T Consensus 78 iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~Nill~~~ 153 (274)
T cd05076 78 LAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKE-KGRVPVAWKITVAQQLASALSYLE---DKNLVHGNVCAKNILLARL 153 (274)
T ss_pred eeeEEEEEEeCCceEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---cCCccCCCCCcccEEEecc
Confidence 999999999999999999999999999998753 346899999999999999999999 7899999999999999765
Q ss_pred C-------CceeccceeeeeeCCCCCCCccccccccccccccccccC-CcccccCcchhhHHHHHHH-HhCCCcccCCcc
Q 003296 697 K-------EPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYT-MRVTMAGNVYSFGVILLEL-LTGKTAVNQGNE 767 (833)
Q Consensus 697 ~-------~~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el-ltg~~p~~~~~~ 767 (833)
+ .+|++|||++...... ....|+..|+|||++.+ ..++.++|||||||++||| ++|+.||.....
T Consensus 154 ~~~~~~~~~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~ 227 (274)
T cd05076 154 GLAEGTSPFIKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTP 227 (274)
T ss_pred CcccCccceeeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccCh
Confidence 4 3799999987644221 22457889999998865 5689999999999999999 479999974332
Q ss_pred HHHHHHHhhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 003296 768 LAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLL 830 (833)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~ 830 (833)
.... ........ ... ....++.+++.+||+.+|++|||+.||+++|.
T Consensus 228 ~~~~--~~~~~~~~--------~~~------~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 228 SEKE--RFYEKKHR--------LPE------PSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred HHHH--HHHHhccC--------CCC------CCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 1110 00000000 000 11235788999999999999999999999873
No 224
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.9e-38 Score=336.63 Aligned_cols=252 Identities=18% Similarity=0.219 Sum_probs=202.6
Q ss_pred HhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
.+|+..+.||+|+||+||+|.. ++|+.||+|++.... .....+.|.+|++++++++||||+++++++...+..++|
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA---KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMC 81 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC---cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEE
Confidence 4677788999999999999996 478999999884221 122357899999999999999999999999999999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
|||+++|+|.+++.. ...+++..+..++.+++.|+.|||+ ..+++||||||+||++++++.++++|||++......
T Consensus 82 ~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~ 157 (284)
T cd06620 82 MEFMDCGSLDRIYKK--GGPIPVEILGKIAVAVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS 157 (284)
T ss_pred EecCCCCCHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcEEEccCCcccchhhh
Confidence 999999999999876 3468999999999999999999994 357999999999999999999999999998754322
Q ss_pred CCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccH----------HHHHHHhhccccccc
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNEL----------AKWVLRNSAQQDKLD 783 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~----------~~~~~~~~~~~~~~~ 783 (833)
. .....||..|+|||++.+..++.++|||||||++||++||+.||...... ..+....
T Consensus 158 ~----~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~-------- 225 (284)
T cd06620 158 I----ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQI-------- 225 (284)
T ss_pred c----cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHH--------
Confidence 1 12457999999999998888999999999999999999999999743321 1111111
Q ss_pred ccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 003296 784 HILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRML 829 (833)
Q Consensus 784 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L 829 (833)
........ .....+.++.+++.+|++.||++|||+.||+++.
T Consensus 226 --~~~~~~~~--~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 226 --VQEPPPRL--PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred --hhccCCCC--CchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 10000000 0112345688999999999999999999999863
No 225
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.2e-38 Score=369.76 Aligned_cols=256 Identities=18% Similarity=0.291 Sum_probs=200.2
Q ss_pred HHhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecC--Cce
Q 003296 554 EAVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS--DSA 630 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~--~~~ 630 (833)
...|...+.||+|+||.||+|... ++..||+|.+.... ........|.+|+.++++++|||||+++++|... +.+
T Consensus 12 l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~--l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l 89 (1021)
T PTZ00266 12 LNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRG--LKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL 89 (1021)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccc--cCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence 457888899999999999999974 67889999984221 1122346799999999999999999999998653 568
Q ss_pred EEEEeeCCCCChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHhhhcCC----CCCeeecCCCccceeeCCC--------
Q 003296 631 YLFYEYAPKGTLFDVLHGCL--ENALDWASRYSIAVGVAQGLAFLHGFT----SNPILLLDLSTRNIFLKSL-------- 696 (833)
Q Consensus 631 ~lv~ey~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~ylH~~~----~~~iiHrdlk~~Nill~~~-------- 696 (833)
|+||||+++|+|.+++.... ...+++..++.|+.||+.||+|||... ..+||||||||+|||++.+
T Consensus 90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~ 169 (1021)
T PTZ00266 90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT 169 (1021)
T ss_pred EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence 99999999999999997532 246999999999999999999999532 1469999999999999642
Q ss_pred ---------CCceeccceeeeeeCCCCCCCccccccccccccccccccC--CcccccCcchhhHHHHHHHHhCCCcccCC
Q 003296 697 ---------KEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYT--MRVTMAGNVYSFGVILLELLTGKTAVNQG 765 (833)
Q Consensus 697 ---------~~~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~S~Gvvl~elltg~~p~~~~ 765 (833)
..+||+|||+++...... ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||...
T Consensus 170 ~~~~n~ng~~iVKLsDFGlAr~l~~~s---~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~ 246 (1021)
T PTZ00266 170 AQANNLNGRPIAKIGDFGLSKNIGIES---MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKA 246 (1021)
T ss_pred ccccccCCCCceEEccCCccccccccc---cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcC
Confidence 348999999998764322 1234679999999998854 45889999999999999999999999865
Q ss_pred ccHHHHHHHhhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 766 NELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
......+...... . .+.. ...+.++.+++.+||+.+|.+||++.|++.+
T Consensus 247 ~~~~qli~~lk~~-p--------~lpi-----~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h 295 (1021)
T PTZ00266 247 NNFSQLISELKRG-P--------DLPI-----KGKSKELNILIKNLLNLSAKERPSALQCLGY 295 (1021)
T ss_pred CcHHHHHHHHhcC-C--------CCCc-----CCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence 5544433222111 0 0000 1123567899999999999999999999853
No 226
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=8.9e-38 Score=326.38 Aligned_cols=249 Identities=18% Similarity=0.285 Sum_probs=196.4
Q ss_pred cccccCcccEEEEEEcC--C--CceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEee
Q 003296 561 NVELKTRFSTYYKAVMP--S--GMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEY 636 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~~--~--~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey 636 (833)
+.||+|+||.||+|+.. + +..||+|.+...... ...+++.+|++++++++|||||++++++. .+..++||||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~ 76 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA---AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMEL 76 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch---HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEe
Confidence 46999999999999852 2 378999998422211 23567999999999999999999999876 4568999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCC
Q 003296 637 APKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKST 716 (833)
Q Consensus 637 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~ 716 (833)
+++|+|.+++... ..++|..+..++.|++.|++||| ..+++||||||+||+++.++.+|++|||+++........
T Consensus 77 ~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~ 151 (257)
T cd05060 77 APLGPLLKYLKKR--REIPVSDLKELAHQVAMGMAYLE---SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY 151 (257)
T ss_pred CCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHh---hcCeeccCcccceEEEcCCCcEEeccccccceeecCCcc
Confidence 9999999999863 36899999999999999999999 778999999999999999999999999999876433221
Q ss_pred C-ccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccccccCCc
Q 003296 717 G-SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTS 794 (833)
Q Consensus 717 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (833)
. ......++..|+|||...+..++.++|||||||++|||++ |+.||...... +...... ...... .
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~-~~~~~~~-~~~~~~------~---- 219 (257)
T cd05060 152 YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA-EVIAMLE-SGERLP------R---- 219 (257)
T ss_pred cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH-HHHHHHH-cCCcCC------C----
Confidence 1 1112234568999999988889999999999999999998 99999754332 1111111 111100 0
Q ss_pred hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 795 LAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 795 ~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
....+..+.+++.+||..+|++||++.|+++.|+++
T Consensus 220 --~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 220 --PEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred --CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 012235778999999999999999999999999875
No 227
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=2.9e-38 Score=334.20 Aligned_cols=251 Identities=19% Similarity=0.210 Sum_probs=196.4
Q ss_pred hcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
+|+..++||+|+||.||+|+. .+++.||+|++.... .....++|.+|++++++++||||++++++|..++..++||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI---TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICT 78 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC---ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEE
Confidence 466778999999999999996 578999999984221 1123467999999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
||+++|+|..+. .+++..+..++.|++.||+||| +.+|+|+||||+||+++.++.+|++|||++.......
T Consensus 79 e~~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~ 149 (279)
T cd06619 79 EFMDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLW---SLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI 149 (279)
T ss_pred ecCCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc
Confidence 999999997542 3688889999999999999999 7899999999999999999999999999998654322
Q ss_pred CCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCc
Q 003296 715 STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTS 794 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (833)
.....||..|+|||++.+..++.++|||||||++|||++|+.||............. .....+.+......
T Consensus 150 ----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~----~~~~~~~~~~~~~~- 220 (279)
T cd06619 150 ----AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPL----QLLQCIVDEDPPVL- 220 (279)
T ss_pred ----ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchH----HHHHHHhccCCCCC-
Confidence 234679999999999998889999999999999999999999996322110000000 00000000000000
Q ss_pred hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 795 LAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 795 ~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.......++.+++.+|++.||++||+++|++++
T Consensus 221 -~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 221 -PVGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred -CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 001233467899999999999999999999875
No 228
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.2e-37 Score=326.16 Aligned_cols=250 Identities=22% Similarity=0.297 Sum_probs=202.8
Q ss_pred cccccCcccEEEEEEcCC----CceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEee
Q 003296 561 NVELKTRFSTYYKAVMPS----GMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEY 636 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey 636 (833)
+.||+|+||.||+|.... +..||||.+..... ....+.+.+|++++++++||||+++++++......++||||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 77 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDAS---EEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEY 77 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccc---hhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEe
Confidence 468999999999999753 88999999953221 11357899999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCC-------CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeee
Q 003296 637 APKGTLFDVLHGCL-------ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKV 709 (833)
Q Consensus 637 ~~~g~L~~~l~~~~-------~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~ 709 (833)
+++|+|.+++.... ...++|.++..++.|+++||+||| ..+++||||||+||++++++.+|++|||.+..
T Consensus 78 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~ 154 (262)
T cd00192 78 MEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRD 154 (262)
T ss_pred ccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHH---cCCcccCccCcceEEECCCCcEEEcccccccc
Confidence 99999999998642 256899999999999999999999 78999999999999999999999999999987
Q ss_pred eCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccc
Q 003296 710 IDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDF 788 (833)
Q Consensus 710 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (833)
..............+++.|+|||.+....++.++||||+||++|||++ |+.||..... .+...... .....
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-~~~~~~~~-~~~~~------ 226 (262)
T cd00192 155 VYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN-EEVLEYLR-KGYRL------ 226 (262)
T ss_pred cccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH-HHHHHHHH-cCCCC------
Confidence 754332222344668899999999988889999999999999999999 6999975432 22111111 10000
Q ss_pred cccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 003296 789 NVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLL 830 (833)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~ 830 (833)
.. ....+.++.+++.+||+.+|++|||+.|++++|+
T Consensus 227 ~~------~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 227 PK------PEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred CC------CccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 00 1122457889999999999999999999999874
No 229
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6e-38 Score=340.69 Aligned_cols=258 Identities=20% Similarity=0.254 Sum_probs=202.9
Q ss_pred HhcCCccccccCcccEEEEEEcC--------CCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEe
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP--------SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVL 625 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~ 625 (833)
..|...+.||+|+||.||+|... ++..||+|.++... .....++|.+|+++++++ +|||||+++++|.
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 88 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA---TDKDLSDLVSEMEMMKMIGKHKNIINLLGACT 88 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc---CHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEc
Confidence 45778899999999999999742 23478999884211 122346899999999999 7999999999999
Q ss_pred cCCceEEEEeeCCCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccce
Q 003296 626 ASDSAYLFYEYAPKGTLFDVLHGCL--------------ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNI 691 (833)
Q Consensus 626 ~~~~~~lv~ey~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Ni 691 (833)
.++..++||||+++|+|.+++.... ...++|.++..++.|+++||+||| ..+|+||||||+||
T Consensus 89 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Ni 165 (334)
T cd05100 89 QDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLA---SQKCIHRDLAARNV 165 (334)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceE
Confidence 9999999999999999999997532 235889999999999999999999 78999999999999
Q ss_pred eeCCCCCceeccceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHH
Q 003296 692 FLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAK 770 (833)
Q Consensus 692 ll~~~~~~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~ 770 (833)
+++.++.+|++|||+++...............++..|||||++.+..++.++|||||||++|||++ |..||.+.. ..+
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-~~~ 244 (334)
T cd05100 166 LVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP-VEE 244 (334)
T ss_pred EEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC-HHH
Confidence 999999999999999987643222111222345678999999998889999999999999999998 888886432 222
Q ss_pred HHHHhhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 771 WVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 771 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
+....... .... .. ...+.++.+++.+||+.+|++||+|.|++++|+++
T Consensus 245 ~~~~~~~~-~~~~------~~------~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~ 293 (334)
T cd05100 245 LFKLLKEG-HRMD------KP------ANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRV 293 (334)
T ss_pred HHHHHHcC-CCCC------CC------CCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 22221111 1000 00 12234678999999999999999999999999865
No 230
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=3e-38 Score=333.82 Aligned_cols=248 Identities=17% Similarity=0.284 Sum_probs=199.9
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
.|...+.||+|+||.||+|... +|..||+|.+..... ....+.+.+|++++++++||||+++++++..++..|+||
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA---EDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIM 81 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc---hHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEE
Confidence 4555678999999999999864 688999999842211 123467999999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
||+++|+|.+++.. ..+++..+..++.|+++|+.||| ..+++|+||||+||++++++.+|++|||+++......
T Consensus 82 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06642 82 EYLGGGSALDLLKP---GPLEETYIATILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ 155 (277)
T ss_pred EccCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHh---cCCeeccCCChheEEEeCCCCEEEccccccccccCcc
Confidence 99999999999864 46899999999999999999999 7899999999999999999999999999998664322
Q ss_pred CCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCc
Q 003296 715 STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTS 794 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (833)
. ......|+..|+|||++.+..++.++|||||||++|||++|+.||....... +... ... .. .+..
T Consensus 156 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~-~~~~-~~~-~~-----~~~~---- 221 (277)
T cd06642 156 I--KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR-VLFL-IPK-NS-----PPTL---- 221 (277)
T ss_pred h--hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh-HHhh-hhc-CC-----CCCC----
Confidence 1 1133568999999999988889999999999999999999999986433211 1110 000 00 0001
Q ss_pred hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 795 LAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 795 ~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
....+.++.+++.+||+.+|++||+|.||+++
T Consensus 222 --~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 222 --EGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred --CcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 11234567899999999999999999999985
No 231
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=3.6e-38 Score=329.14 Aligned_cols=250 Identities=18% Similarity=0.266 Sum_probs=203.7
Q ss_pred HhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
+.|+..+.||+|+||.||+|... +++.||+|.+... . ..++|.+|++++++++||||+++++++..++..|++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~-~-----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~ 76 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVE-E-----DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIV 76 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecH-H-----HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEE
Confidence 46788899999999999999985 5899999998422 1 157899999999999999999999999999999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
|||+++++|.+++... ...++|..+..++.|+++|+.||| ..+|+||||+|+||+++.++.+|++|||++......
T Consensus 77 ~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~ 152 (256)
T cd06612 77 MEYCGAGSVSDIMKIT-NKTLTEEEIAAILYQTLKGLEYLH---SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDT 152 (256)
T ss_pred EecCCCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEECCCCcEEEcccccchhcccC
Confidence 9999999999999753 346899999999999999999999 778999999999999999999999999999876433
Q ss_pred CCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCC
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRT 793 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (833)
.. ......|+..|+|||++.+..++.++|||||||++|||++|+.||.............. .....
T Consensus 153 ~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~--------~~~~~---- 218 (256)
T cd06612 153 MA--KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPN--------KPPPT---- 218 (256)
T ss_pred cc--ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhcc--------CCCCC----
Confidence 21 12345689999999999888899999999999999999999999975433221111000 00000
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 794 SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 794 ~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.........++.+++.+||+.||++|||+.||+++
T Consensus 219 ~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 219 LSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred CCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 00111234568899999999999999999999874
No 232
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4e-38 Score=335.80 Aligned_cols=249 Identities=21% Similarity=0.311 Sum_probs=202.8
Q ss_pred hcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
.|...+.||.|+||.||+|.. .+|+.||+|.+... .....+.+.+|++++++++||||+++++++...+..|+||
T Consensus 20 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 95 (296)
T cd06655 20 KYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQ----KQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVM 95 (296)
T ss_pred eEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecc----cCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEE
Confidence 466778999999999999986 58999999998422 2233567899999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
||+++|+|.+++.. ..++|.++..++.|++.|++||| +.+++||||||+||+++.++.+|++|||++.......
T Consensus 96 e~~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH---~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~ 169 (296)
T cd06655 96 EYLAGGSLTDVVTE---TCMDEAQIAAVCRECLQALEFLH---ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ 169 (296)
T ss_pred EecCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccchhccccc
Confidence 99999999999874 35899999999999999999999 7899999999999999999999999999988654332
Q ss_pred CCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCc
Q 003296 715 STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTS 794 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (833)
.. .....|+..|+|||.+.+..++.++|||||||++|||++|+.||................ ... ..
T Consensus 170 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~---~~~-----~~--- 236 (296)
T cd06655 170 SK--RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG---TPE-----LQ--- 236 (296)
T ss_pred cc--CCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC---Ccc-----cC---
Confidence 21 134578999999999988889999999999999999999999997654433222111100 000 00
Q ss_pred hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 795 LAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 795 ~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
........+.+++.+||+.||++||++.+++++
T Consensus 237 -~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 237 -NPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred -CcccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 011233467789999999999999999999875
No 233
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.7e-38 Score=336.36 Aligned_cols=251 Identities=21% Similarity=0.298 Sum_probs=203.3
Q ss_pred HHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEE
Q 003296 554 EAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYL 632 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 632 (833)
...|...+.||+|+||.||+|+. .+|+.||+|.+.... ....+.+.+|+.++++++||||++++++|..++..|+
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l 93 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQ----QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV 93 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCc----cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEE
Confidence 35678889999999999999996 589999999984221 2234678999999999999999999999999999999
Q ss_pred EEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCC
Q 003296 633 FYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDP 712 (833)
Q Consensus 633 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~ 712 (833)
||||+++|+|.+++.+ ..+++.++..++.|++.||.||| +.+|+||||||+||+++.++.+|++|||++.....
T Consensus 94 v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~l~~~L~~LH---~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~ 167 (297)
T cd06656 94 VMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALDFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 167 (297)
T ss_pred eecccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEECcCccceEccC
Confidence 9999999999999874 35899999999999999999999 78999999999999999999999999999987643
Q ss_pred CCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccC
Q 003296 713 SKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSR 792 (833)
Q Consensus 713 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 792 (833)
... ......|++.|+|||+..+..++.++|||||||++|||++|+.||........... .... . .+.
T Consensus 168 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~-~~~~-~------~~~--- 234 (297)
T cd06656 168 EQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-IATN-G------TPE--- 234 (297)
T ss_pred Ccc--CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheee-eccC-C------CCC---
Confidence 322 12345789999999999888899999999999999999999999975433211110 0000 0 000
Q ss_pred CchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 793 TSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 793 ~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
..........+.+++.+||+.||++||+++||+++
T Consensus 235 -~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 235 -LQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred -CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00111233457789999999999999999999874
No 234
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=2.7e-38 Score=332.46 Aligned_cols=255 Identities=18% Similarity=0.236 Sum_probs=198.8
Q ss_pred HHHHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCce
Q 003296 552 AMEAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSA 630 (833)
Q Consensus 552 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~ 630 (833)
.+++.+.....||+|+||.||+|.. .++..||+|.+..... ...+.+.+|++++++++|||||++++++..++..
T Consensus 5 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 80 (268)
T cd06624 5 YEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDS----RYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFF 80 (268)
T ss_pred cccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCH----HHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEE
Confidence 3455666678999999999999996 4688999999843221 2346799999999999999999999999999999
Q ss_pred EEEEeeCCCCChhhhhhcCCCCCC--CHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCC-CCCceeccceee
Q 003296 631 YLFYEYAPKGTLFDVLHGCLENAL--DWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKS-LKEPQIGDIELC 707 (833)
Q Consensus 631 ~lv~ey~~~g~L~~~l~~~~~~~l--~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~-~~~~ki~dfgl~ 707 (833)
++||||+++++|.++++... ..+ ++..+..++.|++.|++||| ..+|+||||||+||+++. ++.+|++|||++
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~ 156 (268)
T cd06624 81 KIFMEQVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLH---DNQIVHRDIKGDNVLVNTYSGVVKISDFGTS 156 (268)
T ss_pred EEEEecCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCeEEEecchhh
Confidence 99999999999999998532 234 88889999999999999999 789999999999999986 678999999998
Q ss_pred eeeCCCCCCCccccccccccccccccccCCc--ccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccccc
Q 003296 708 KVIDPSKSTGSLSTVAGSVGYIPPEYAYTMR--VTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHI 785 (833)
Q Consensus 708 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 785 (833)
........ ......|++.|+|||++.+.. ++.++|||||||++|||++|+.||................ .
T Consensus 157 ~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~-~----- 228 (268)
T cd06624 157 KRLAGINP--CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMF-K----- 228 (268)
T ss_pred eecccCCC--ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhh-c-----
Confidence 76543221 123356899999999986543 7899999999999999999999997433211111000000 0
Q ss_pred ccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 786 LDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
..+.+ +.....++.+++.+||+.+|++|||+.|++.+
T Consensus 229 ~~~~~------~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 229 IHPEI------PESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred cCCCC------CcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 00011 11234567889999999999999999999875
No 235
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.4e-38 Score=348.55 Aligned_cols=260 Identities=15% Similarity=0.195 Sum_probs=198.9
Q ss_pred HHhcCCccccccCcccEEEEEEcC---CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCce
Q 003296 554 EAVANPLNVELKTRFSTYYKAVMP---SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSA 630 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~ 630 (833)
...|...+.||+|+||.||+|... .+..||||.+.. .+.+.+|++++++++|||||++++++...+..
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~---------~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~ 161 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTG---------GKTPGREIDILKTISHRAIINLIHAYRWKSTV 161 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccc---------cccHHHHHHHHHhcCCCCccceeeeEeeCCEE
Confidence 456888999999999999999753 467899999831 13456899999999999999999999999999
Q ss_pred EEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeee
Q 003296 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVI 710 (833)
Q Consensus 631 ~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~ 710 (833)
|+||||+. ++|.+++.. ...++|.+++.++.|++.||+||| ..+|+||||||+|||++.++.+||+|||+++..
T Consensus 162 ~lv~e~~~-~~l~~~l~~--~~~l~~~~~~~i~~ql~~aL~~LH---~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~ 235 (392)
T PHA03207 162 CMVMPKYK-CDLFTYVDR--SGPLPLEQAITIQRRLLEALAYLH---GRGIIHRDVKTENIFLDEPENAVLGDFGAACKL 235 (392)
T ss_pred EEEehhcC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEccCcccccc
Confidence 99999996 689998854 456999999999999999999999 789999999999999999999999999999866
Q ss_pred CCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCcc---HHHH--HHHhhcccc-ccc-
Q 003296 711 DPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNE---LAKW--VLRNSAQQD-KLD- 783 (833)
Q Consensus 711 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~---~~~~--~~~~~~~~~-~~~- 783 (833)
.............||+.|+|||++.+..|+.++|||||||++|||++|+.||.+... .... +........ ...
T Consensus 236 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~ 315 (392)
T PHA03207 236 DAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQ 315 (392)
T ss_pred CcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCC
Confidence 543322222356799999999999988999999999999999999999999974321 1111 000000000 000
Q ss_pred --------------ccccccccCCch-hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 784 --------------HILDFNVSRTSL-AVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 784 --------------~~~~~~~~~~~~-~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
....+....+.. .......++.+++.+|+..||++|||+.|++.+
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 316 NGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred ccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000000000000 001123467789999999999999999999875
No 236
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=4.1e-38 Score=330.59 Aligned_cols=255 Identities=18% Similarity=0.281 Sum_probs=202.1
Q ss_pred cCCccccccCcccEEEEEEcCCCceEEEEEccccch--hhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 557 ANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDK--IFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
|...+.||+|+||.||+|...+|+.+|||.+..... .......+.+.+|++++++++|+||++++++|.+.+..++||
T Consensus 2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 81 (265)
T cd06631 2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFM 81 (265)
T ss_pred ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEE
Confidence 567789999999999999988999999999842211 111122356899999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
||+++|+|.+++.. ...+++..+..++.|++.||+||| ..+|+|+||||+||++++++.+|++|||+++......
T Consensus 82 e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 156 (265)
T cd06631 82 EFVPGGSISSILNR--FGPLPEPVFCKYTKQILDGVAYLH---NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVG 156 (265)
T ss_pred ecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhcc
Confidence 99999999999975 346889999999999999999999 7789999999999999999999999999987542211
Q ss_pred ----CCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccc
Q 003296 715 ----STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNV 790 (833)
Q Consensus 715 ----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (833)
.........|+..|+|||++.+..++.++|||||||++|||++|+.||................ ... +..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~-----~~~ 230 (265)
T cd06631 157 LHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHR-GLM-----PRL 230 (265)
T ss_pred ccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhcc-CCC-----CCC
Confidence 0111234578999999999998889999999999999999999999997544332221111000 000 011
Q ss_pred cCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 791 SRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 791 ~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
. .....++.+++.+||+.+|++||++.|++++
T Consensus 231 ~------~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 262 (265)
T cd06631 231 P------DSFSAAAIDFVTSCLTRDQHERPSALQLLRH 262 (265)
T ss_pred C------CCCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 1 1234567899999999999999999999864
No 237
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=8.2e-38 Score=337.38 Aligned_cols=195 Identities=22% Similarity=0.327 Sum_probs=160.8
Q ss_pred ccccccCcccEEEEEEcC---CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEec--CCceEEEE
Q 003296 560 LNVELKTRFSTYYKAVMP---SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLA--SDSAYLFY 634 (833)
Q Consensus 560 ~~~ig~g~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~--~~~~~lv~ 634 (833)
...||+|+||+||+|... +++.||+|++... .....+.+|++++++++|||||++++++.. +...|+||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT------GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 79 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCC------CCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEE
Confidence 368999999999999864 5688999998422 123567899999999999999999999865 45689999
Q ss_pred eeCCCCChhhhhhcCC-------CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceee----CCCCCceecc
Q 003296 635 EYAPKGTLFDVLHGCL-------ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFL----KSLKEPQIGD 703 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~-------~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill----~~~~~~ki~d 703 (833)
||+. ++|.+++.... ...+++..+..++.|++.||+||| +.+|+||||||+|||+ +..+.+||+|
T Consensus 80 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivHrDlkp~Nil~~~~~~~~~~~kl~D 155 (317)
T cd07868 80 DYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIAD 155 (317)
T ss_pred eccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEecCCCCcCcEEEee
Confidence 9996 48888875321 125889999999999999999999 7889999999999999 4567899999
Q ss_pred ceeeeeeCCCCCC-CccccccccccccccccccCC-cccccCcchhhHHHHHHHHhCCCcccC
Q 003296 704 IELCKVIDPSKST-GSLSTVAGSVGYIPPEYAYTM-RVTMAGNVYSFGVILLELLTGKTAVNQ 764 (833)
Q Consensus 704 fgl~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p~~~ 764 (833)
||+++........ .......||+.|||||++.+. .++.++||||+||++|||++|++||..
T Consensus 156 fG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 156 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred cCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence 9999876433211 122456899999999998764 589999999999999999999999963
No 238
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=9.8e-38 Score=326.92 Aligned_cols=255 Identities=21% Similarity=0.292 Sum_probs=206.6
Q ss_pred HHhcCCccccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 554 EAVANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
.++|...+.||+|+||.||+|...+++.||||.+.... ...+++.+|++++++++||||+++++++......++|
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 79 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-----MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIV 79 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-----cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEE
Confidence 35678889999999999999998888999999984221 2356799999999999999999999999998999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
|||+++|+|.+++.......++|.++..++.|++.|++||| ..+++||||||+||++++++.+|++|||+++.....
T Consensus 80 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~ 156 (261)
T cd05034 80 TEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLE---SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDD 156 (261)
T ss_pred EeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcchheEEEcCCCCEEECccccceeccch
Confidence 99999999999998754457899999999999999999999 788999999999999999999999999999876432
Q ss_pred CCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccccccC
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSR 792 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 792 (833)
... ......++..|+|||.+.+..++.++|||||||++||++| |+.||.+..... ........ ... ...
T Consensus 157 ~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~-~~~~~~~~---~~~----~~~- 226 (261)
T cd05034 157 EYT-AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNRE-VLEQVERG---YRM----PRP- 226 (261)
T ss_pred hhh-hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHcC---CCC----CCC-
Confidence 111 1122345678999999988889999999999999999999 999997543221 11111110 000 000
Q ss_pred CchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 003296 793 TSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831 (833)
Q Consensus 793 ~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~ 831 (833)
...+.++.+++.+|++.+|++||+++|+.+.|++
T Consensus 227 -----~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 227 -----PNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred -----CCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 1123467899999999999999999999999875
No 239
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=9.3e-38 Score=326.09 Aligned_cols=252 Identities=21% Similarity=0.299 Sum_probs=205.2
Q ss_pred cCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEe
Q 003296 557 ANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYE 635 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 635 (833)
|+..++||.|+||.||.+.. .+|..+|+|++.... ......+++.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e 79 (256)
T cd08221 2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTR--LSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEME 79 (256)
T ss_pred ceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecc--cchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEE
Confidence 67789999999999999986 578999999984221 112335678999999999999999999999999999999999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCC
Q 003296 636 YAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715 (833)
Q Consensus 636 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~ 715 (833)
|+++|+|.+++.......+++.++..++.|+++|++||| +.+++||||||+||++++++.+|++|||+++.......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~ 156 (256)
T cd08221 80 YANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIH---KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS 156 (256)
T ss_pred ecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChHhEEEeCCCCEEECcCcceEEcccccc
Confidence 999999999998654456899999999999999999999 77899999999999999999999999999987643331
Q ss_pred CCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCch
Q 003296 716 TGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSL 795 (833)
Q Consensus 716 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (833)
......|++.|+|||+..+..++.++|||||||++|||++|+.||...... +....... ......
T Consensus 157 --~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~-~~~~~~~~--~~~~~~---------- 221 (256)
T cd08221 157 --MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPL-NLVVKIVQ--GNYTPV---------- 221 (256)
T ss_pred --cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHc--CCCCCC----------
Confidence 223467899999999998888899999999999999999999999754322 11111111 100000
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 003296 796 AVRSQMLTVLKVAVACVSVSPEARPKMKSVLRML 829 (833)
Q Consensus 796 ~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L 829 (833)
....+.++.+++.+||+.+|++||++.|+++++
T Consensus 222 -~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 222 -VSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred -ccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 012345678999999999999999999999864
No 240
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=4.4e-38 Score=328.83 Aligned_cols=240 Identities=17% Similarity=0.313 Sum_probs=187.3
Q ss_pred cccccCcccEEEEEEcC-C-------CceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEE
Q 003296 561 NVELKTRFSTYYKAVMP-S-------GMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYL 632 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~~-~-------~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 632 (833)
+.||+|+||.||+|... . ...||+|.+.... ....++|.+|+.++++++|||||++++++..++..++
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~l 76 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH----RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIM 76 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh----HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEE
Confidence 46899999999999863 2 2348888873211 2234678999999999999999999999999999999
Q ss_pred EEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCC--------ceeccc
Q 003296 633 FYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKE--------PQIGDI 704 (833)
Q Consensus 633 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~--------~ki~df 704 (833)
||||+++|+|.++++.. ...++|..++.++.|++.||+||| +.+|+||||||+||+++.++. +|++||
T Consensus 77 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~ 152 (258)
T cd05078 77 VQEYVKFGSLDTYLKKN-KNLINISWKLEVAKQLAWALHFLE---DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDP 152 (258)
T ss_pred EEecCCCCcHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEEecccccccCCCceEEeccc
Confidence 99999999999999864 236899999999999999999999 789999999999999987766 488888
Q ss_pred eeeeeeCCCCCCCccccccccccccccccccC-CcccccCcchhhHHHHHHHHhCC-CcccCCccHHHHHHHhhcccccc
Q 003296 705 ELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGK-TAVNQGNELAKWVLRNSAQQDKL 782 (833)
Q Consensus 705 gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~-~p~~~~~~~~~~~~~~~~~~~~~ 782 (833)
|++..... .....|++.|+|||++.+ ..++.++|||||||++|||++|. .|+...... ...... ....
T Consensus 153 g~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~-~~~~~~-~~~~-- 222 (258)
T cd05078 153 GISITVLP------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ-KKLQFY-EDRH-- 222 (258)
T ss_pred ccccccCC------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH-HHHHHH-Hccc--
Confidence 87764422 123568899999999876 45899999999999999999995 555432221 111110 0000
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 003296 783 DHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLL 830 (833)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~ 830 (833)
.++. ....++.+++.+||+.||++|||++|+++.|+
T Consensus 223 ------~~~~------~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 223 ------QLPA------PKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred ------cCCC------CCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0111 11246789999999999999999999999873
No 241
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=9e-38 Score=326.16 Aligned_cols=251 Identities=20% Similarity=0.289 Sum_probs=203.6
Q ss_pred cCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEe
Q 003296 557 ANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYE 635 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 635 (833)
|+..+.||+|+||.||++.. .+|+.||+|++..... .....+++.+|++++++++||||+++++++...+..++|||
T Consensus 2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08218 2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKM--SPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMD 79 (256)
T ss_pred ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhC--ChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence 67788999999999999997 4789999999842211 12234689999999999999999999999999999999999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCC
Q 003296 636 YAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715 (833)
Q Consensus 636 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~ 715 (833)
|+++|+|.+++.......+++.++..++.|++.|++||| +.+++|+||+|+||+++.++.++++|||++........
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~ 156 (256)
T cd08218 80 YCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE 156 (256)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh
Confidence 999999999998654456899999999999999999999 78899999999999999999999999999987643221
Q ss_pred CCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCch
Q 003296 716 TGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSL 795 (833)
Q Consensus 716 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (833)
......|++.|+|||+..+..++.++|||||||++|||++|+.||..... ...+...... . ... .
T Consensus 157 --~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~-~~~~~~~~~~-~-~~~-----~----- 221 (256)
T cd08218 157 --LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM-KNLVLKIIRG-S-YPP-----V----- 221 (256)
T ss_pred --hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH-HHHHHHHhcC-C-CCC-----C-----
Confidence 11235689999999999888899999999999999999999999975432 2222111111 0 000 0
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 796 AVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 796 ~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
......++.+++.+||+.+|++||+|.||+++
T Consensus 222 -~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 222 -SSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred -cccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 11234567899999999999999999999975
No 242
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=9.4e-38 Score=331.79 Aligned_cols=264 Identities=15% Similarity=0.183 Sum_probs=202.0
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
.|+....||+|+||.||+|... +|+.||+|++.... ......+.|.+|++++++++||||+++++++...+..++||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 79 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESE--DDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVF 79 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecc--cCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEE
Confidence 4777889999999999999975 68999999984221 11223467899999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
||++++.|..+... ...++|..+..++.|++.||+||| ..+|+||||||+||+++.++.+|++|||++.......
T Consensus 80 e~~~~~~l~~~~~~--~~~~~~~~~~~~~~ql~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07847 80 EYCDHTVLNELEKN--PRGVPEHLIKKIIWQTLQAVNFCH---KHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPG 154 (286)
T ss_pred eccCccHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCChhhEEEcCCCcEEECccccceecCCCc
Confidence 99999988887764 346899999999999999999999 7899999999999999999999999999998765432
Q ss_pred CCCccccccccccccccccccC-CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccc------------
Q 003296 715 STGSLSTVAGSVGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDK------------ 781 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~------------ 781 (833)
. ......|+..|+|||++.+ ..++.++|||||||++|||++|+.||.+.................
T Consensus 155 ~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07847 155 D--DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQ 232 (286)
T ss_pred c--cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccc
Confidence 1 1123568899999999875 458899999999999999999999997554332211110000000
Q ss_pred -ccccccccccCC---chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 782 -LDHILDFNVSRT---SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 782 -~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
......+..... ..........+.+++.+||+.||++||++.|++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 233 FFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred ccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 000000000000 00011234578899999999999999999999865
No 243
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=8.4e-38 Score=334.72 Aligned_cols=257 Identities=21% Similarity=0.322 Sum_probs=199.9
Q ss_pred HHhcCCccccccCcccEEEEEEc-CCCc----eEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCC
Q 003296 554 EAVANPLNVELKTRFSTYYKAVM-PSGM----SYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD 628 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~ 628 (833)
..+|+..+.||+|+||.||+|.. .+|. .||+|.+..... .....+|.+|+.++++++|||||+++|+|...
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~- 81 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG---PKANVEFMDEALIMASMDHPHLVRLLGVCLSP- 81 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCC---HHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-
Confidence 45677889999999999999986 3454 478888842211 12234789999999999999999999999754
Q ss_pred ceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeee
Q 003296 629 SAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCK 708 (833)
Q Consensus 629 ~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~ 708 (833)
..++|+||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||++++++.+|++|||+++
T Consensus 82 ~~~~v~e~~~~g~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~ 157 (303)
T cd05110 82 TIQLVTQLMPHGCLLDYVHEH-KDNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLAR 157 (303)
T ss_pred CceeeehhcCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHh---hcCeeccccccceeeecCCCceEEccccccc
Confidence 567999999999999998753 335899999999999999999999 7899999999999999999999999999998
Q ss_pred eeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhccccccccccc
Q 003296 709 VIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILD 787 (833)
Q Consensus 709 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (833)
...............++..|+|||++.+..++.++|||||||++|||++ |+.||.+... ..+.. .........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~-~~~~~-~~~~~~~~~---- 231 (303)
T cd05110 158 LLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT-REIPD-LLEKGERLP---- 231 (303)
T ss_pred cccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHH-HHHCCCCCC----
Confidence 7643322212223456789999999988889999999999999999997 8999964321 11111 111111100
Q ss_pred ccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 788 FNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
.. ......+.+++.+||..+|++||+++|+++.|+++
T Consensus 232 ----~~----~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~ 268 (303)
T cd05110 232 ----QP----PICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRM 268 (303)
T ss_pred ----CC----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 00 01234678899999999999999999999998864
No 244
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.2e-38 Score=346.50 Aligned_cols=193 Identities=17% Similarity=0.226 Sum_probs=166.4
Q ss_pred HHHHhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCce
Q 003296 552 AMEAVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSA 630 (833)
Q Consensus 552 ~~~~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~ 630 (833)
....+|+..+.||+|+||.||+|+.. ++..||+|... . .....|+.++++++|||||++++++...+..
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~-~---------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 132 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQ-K---------GTTLIEAMLLQNVNHPSVIRMKDTLVSGAIT 132 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCC-c---------cccHHHHHHHHhCCCCCCcChhheEEeCCee
Confidence 34457899999999999999999975 67889999762 1 2245799999999999999999999999999
Q ss_pred EEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeee
Q 003296 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVI 710 (833)
Q Consensus 631 ~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~ 710 (833)
++||||+. |+|.+++... ...++|..+..|+.|++.||+||| ..+||||||||+|||++.++.+||+|||+++..
T Consensus 133 ~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 207 (357)
T PHA03209 133 CMVLPHYS-SDLYTYLTKR-SRPLPIDQALIIEKQILEGLRYLH---AQRIIHRDVKTENIFINDVDQVCIGDLGAAQFP 207 (357)
T ss_pred EEEEEccC-CcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEecCcccccc
Confidence 99999995 6999988753 346899999999999999999999 789999999999999999999999999999754
Q ss_pred CCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcc
Q 003296 711 DPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAV 762 (833)
Q Consensus 711 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~ 762 (833)
.... ......||+.|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 208 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 208 VVAP---AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred ccCc---ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 3221 223567999999999999989999999999999999999976554
No 245
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.8e-37 Score=322.91 Aligned_cols=250 Identities=20% Similarity=0.276 Sum_probs=198.8
Q ss_pred cccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEeeCCCC
Q 003296 561 NVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKG 640 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey~~~g 640 (833)
+.||+|+||.||+|...+++.||+|++...... ...+.|.+|++++++++||||+++++++......++||||++++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 77 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP---DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGG 77 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCH---HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCC
Confidence 468999999999999877999999998422111 23468999999999999999999999999999999999999999
Q ss_pred ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCccc
Q 003296 641 TLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLS 720 (833)
Q Consensus 641 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~~~ 720 (833)
+|.+++... ...+++..+..++.+++.|++||| ..+++||||||+||+++.++.+|++|||+++............
T Consensus 78 ~l~~~l~~~-~~~~~~~~~~~~~~~~~~~l~~lH---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (251)
T cd05041 78 SLLTFLRKK-KNRLTVKKLLQMSLDAAAGMEYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDG 153 (251)
T ss_pred cHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccc
Confidence 999999753 335889999999999999999999 7889999999999999999999999999998654222111111
Q ss_pred cccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccccccCCchhHHH
Q 003296 721 TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRS 799 (833)
Q Consensus 721 ~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (833)
...++..|+|||++.+..++.++|||||||++|||+| |..||....... ...... .... ... ...
T Consensus 154 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~-~~~~~~-~~~~--------~~~----~~~ 219 (251)
T cd05041 154 LKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ-TRERIE-SGYR--------MPA----PQL 219 (251)
T ss_pred cCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH-HHHHHh-cCCC--------CCC----Ccc
Confidence 2334677999999988889999999999999999999 888886543211 111110 0000 000 112
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 003296 800 QMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831 (833)
Q Consensus 800 ~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~ 831 (833)
.+.++.+++.+|+..+|++|||+.|+++.|+.
T Consensus 220 ~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 220 CPEEIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred CCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 34578899999999999999999999999863
No 246
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=7.4e-38 Score=332.22 Aligned_cols=264 Identities=18% Similarity=0.229 Sum_probs=201.2
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
+|+..+.||+|+||.||+|+.. +|+.||||++.... ......+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 78 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccc--cccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEe
Confidence 3677889999999999999974 78999999984221 12223467899999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
||++ ++|.+++.......+++..+..++.|+++||+||| ..+++||||||+||++++++.+|++|||+++......
T Consensus 79 e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh---~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~ 154 (284)
T cd07860 79 EFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 154 (284)
T ss_pred eccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc
Confidence 9996 68999987655567899999999999999999999 7889999999999999999999999999987654322
Q ss_pred CCCccccccccccccccccccCCc-ccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccccccccc----
Q 003296 715 STGSLSTVAGSVGYIPPEYAYTMR-VTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFN---- 789 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 789 (833)
. ......+++.|+|||++.+.. ++.++|||||||++|||+||+.||.+.............. ........+.
T Consensus 155 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 231 (284)
T cd07860 155 R--TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL-GTPDEVVWPGVTSL 231 (284)
T ss_pred c--ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHh-CCCChhhhhhhhHH
Confidence 1 123346789999999887644 6889999999999999999999997554332221111100 0000000000
Q ss_pred ------cc---CCc--hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 790 ------VS---RTS--LAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 790 ------~~---~~~--~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.. ... ........++.+++.+|++.||++|||++|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 232 PDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred HHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 00 000 0001123467789999999999999999999864
No 247
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.5e-37 Score=326.46 Aligned_cols=254 Identities=19% Similarity=0.264 Sum_probs=196.7
Q ss_pred hcCCccccccCcccEEEEEEc-CCCceEEEEEccccch-hhhccChhHHHHHHHHHhcCCCCCcccceEEEecC--CceE
Q 003296 556 VANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDK-IFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS--DSAY 631 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~--~~~~ 631 (833)
+|...+.+|+|+||.||+|.. .+|..||+|++..... .......+.+.+|+.++++++||||+++++++... ...+
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT 82 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence 577889999999999999997 4789999999843221 11112345789999999999999999999998753 5689
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeC
Q 003296 632 LFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711 (833)
Q Consensus 632 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~ 711 (833)
+||||+++++|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+|++|||+++...
T Consensus 83 l~~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~LH---~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~ 157 (266)
T cd06651 83 IFMEYMPGGSVKDQLKA--YGALTESVTRKYTRQILEGMSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 157 (266)
T ss_pred EEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCCCccccc
Confidence 99999999999999975 345899999999999999999999 7889999999999999999999999999987653
Q ss_pred CCCC-CCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccc
Q 003296 712 PSKS-TGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNV 790 (833)
Q Consensus 712 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (833)
.... ........|+..|+|||++.+..++.++|||||||++|||++|+.||.......... ...... ..+.+
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~-~~~~~~------~~~~~ 230 (266)
T cd06651 158 TICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIF-KIATQP------TNPQL 230 (266)
T ss_pred cccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHH-HHhcCC------CCCCC
Confidence 2111 111123568999999999988889999999999999999999999997543322211 111110 01111
Q ss_pred cCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 791 SRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 791 ~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
+ ......+.+++ +||..+|++||+|+||++|
T Consensus 231 ~------~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 231 P------SHISEHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred c------hhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 1 12233455565 7888999999999999874
No 248
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.9e-37 Score=326.53 Aligned_cols=256 Identities=20% Similarity=0.278 Sum_probs=201.2
Q ss_pred HhcCCccccccCcccEEEEEEcCC----CceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCce
Q 003296 555 AVANPLNVELKTRFSTYYKAVMPS----GMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSA 630 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~ 630 (833)
.+|...+.||+|+||.||+|+..+ ...||||....... ....+.|.+|+.++++++||||+++++++.. +..
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~ 81 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS---PSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPV 81 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC---HHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCc
Confidence 456778899999999999998643 35689998842221 1234679999999999999999999999875 567
Q ss_pred EEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeee
Q 003296 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVI 710 (833)
Q Consensus 631 ~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~ 710 (833)
++||||+++|+|.+++... ...++|..+..++.|++.||+||| +.+++||||||+||+++.++.+|++|||+++..
T Consensus 82 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~ 157 (270)
T cd05056 82 WIVMELAPLGELRSYLQVN-KYSLDLASLILYSYQLSTALAYLE---SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYL 157 (270)
T ss_pred EEEEEcCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccChheEEEecCCCeEEccCceeeec
Confidence 8999999999999999753 235899999999999999999999 788999999999999999999999999999876
Q ss_pred CCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhccccccccccccc
Q 003296 711 DPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFN 789 (833)
Q Consensus 711 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (833)
...... ......++..|+|||++....++.++|||||||++||+++ |+.||.+....... ... ...... .
T Consensus 158 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~-~~~-~~~~~~------~ 228 (270)
T cd05056 158 EDESYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVI-GRI-ENGERL------P 228 (270)
T ss_pred ccccce-ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHH-HHH-HcCCcC------C
Confidence 433211 1123345678999999888889999999999999999996 99999754432211 111 111111 0
Q ss_pred ccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhcC
Q 003296 790 VSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNAR 833 (833)
Q Consensus 790 ~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~r 833 (833)
.. ...+.++.+++.+|+..+|++|||+.|++++|++++
T Consensus 229 ~~------~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~ 266 (270)
T cd05056 229 MP------PNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDIL 266 (270)
T ss_pred CC------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 00 122457888999999999999999999999998764
No 249
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1.3e-37 Score=328.54 Aligned_cols=249 Identities=18% Similarity=0.283 Sum_probs=202.4
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
.|...+.+|.|+||.||+|... +|+.||+|.+.... .......+.+|++++++++||||+++++++.++...|+|+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE---AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIM 78 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc---cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEE
Confidence 4667789999999999999974 78999999984221 1223467899999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
||+++|+|.++++.. .+++..+..++.|++.|+.||| ..+++||||||+||++++++.++++|||+++......
T Consensus 79 e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 152 (274)
T cd06609 79 EYCGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLH---EEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM 152 (274)
T ss_pred EeeCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEcccccceeecccc
Confidence 999999999999853 6899999999999999999999 7889999999999999999999999999998775432
Q ss_pred CCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCc
Q 003296 715 STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTS 794 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (833)
. ......|++.|+|||++.+..++.++|||||||++|||+||+.||....... ...... . .... ....
T Consensus 153 ~--~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~-~~~~~~-~-~~~~-----~~~~-- 220 (274)
T cd06609 153 S--KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR-VLFLIP-K-NNPP-----SLEG-- 220 (274)
T ss_pred c--ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH-HHHHhh-h-cCCC-----CCcc--
Confidence 1 2234678999999999998889999999999999999999999997543221 111100 0 0000 0000
Q ss_pred hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 795 LAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 795 ~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
...+.++.+++.+||..||++|||++|++++
T Consensus 221 ---~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 221 ---NKFSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred ---cccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 0134467889999999999999999999875
No 250
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=2.6e-37 Score=322.73 Aligned_cols=251 Identities=20% Similarity=0.274 Sum_probs=201.6
Q ss_pred hcCCccccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEe
Q 003296 556 VANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYE 635 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 635 (833)
+|+..+.||+|+||.||+|...++..+|+|.+... .....+|.+|++++++++||||+++++++......++|||
T Consensus 5 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~-----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd05112 5 ELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREG-----AMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFE 79 (256)
T ss_pred HeEEEeeecCcccceEEEEEEeCCCeEEEEECCCC-----CCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEE
Confidence 56677899999999999999877889999998422 1234679999999999999999999999999999999999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCC
Q 003296 636 YAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715 (833)
Q Consensus 636 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~ 715 (833)
|+++|+|.++++.. ...++|..+..++.|++.|++||| +.+++||||||+||+++.++.+|++|||+++.......
T Consensus 80 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~ 155 (256)
T cd05112 80 FMEHGCLSDYLRAQ-RGKFSQETLLGMCLDVCEGMAYLE---SSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY 155 (256)
T ss_pred cCCCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccccceEEEcCCCeEEECCCcceeecccCcc
Confidence 99999999999753 235899999999999999999999 77899999999999999999999999999886533221
Q ss_pred CCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccccccCCc
Q 003296 716 TGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTS 794 (833)
Q Consensus 716 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (833)
. ......++.+|+|||++.+..++.++|||||||++|||++ |+.||..... .......... . ....+.
T Consensus 156 ~-~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-~~~~~~~~~~-~---~~~~~~----- 224 (256)
T cd05112 156 T-SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN-SEVVETINAG-F---RLYKPR----- 224 (256)
T ss_pred c-ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH-HHHHHHHhCC-C---CCCCCC-----
Confidence 1 1122345678999999988889999999999999999998 9999974332 2222111100 0 001111
Q ss_pred hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 003296 795 LAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLL 830 (833)
Q Consensus 795 ~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~ 830 (833)
..+.++.+++.+||+.+|++|||+.||+++|+
T Consensus 225 ----~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 225 ----LASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred ----CCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 12356889999999999999999999999874
No 251
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=2.2e-37 Score=322.84 Aligned_cols=247 Identities=19% Similarity=0.284 Sum_probs=199.6
Q ss_pred HhcCCccccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
++|...+.||+|+||.||+|.. +++.||+|++... ...+.|.+|+.++++++||||+++++++..+ ..++||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~------~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~ 77 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCD------VTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVM 77 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCc------chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEE
Confidence 4678889999999999999975 7888999998421 1246799999999999999999999998654 579999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
||+++|+|.+++.......+++.++..++.|++.|++||| +.+++||||||+||+++.++.+|++|||+++......
T Consensus 78 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~ 154 (254)
T cd05083 78 ELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV 154 (254)
T ss_pred ECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCcEEECCCccceeccccC
Confidence 9999999999998654556899999999999999999999 7899999999999999999999999999987643221
Q ss_pred CCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccccccCC
Q 003296 715 STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRT 793 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (833)
.....+..|+|||++.+..++.++|||||||++|||++ |+.||..... ....... ...... + .
T Consensus 155 -----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-~~~~~~~-~~~~~~----~--~--- 218 (254)
T cd05083 155 -----DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL-KEVKECV-EKGYRM----E--P--- 218 (254)
T ss_pred -----CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH-HHHHHHH-hCCCCC----C--C---
Confidence 22344678999999988889999999999999999998 9999974432 2221111 110000 0 0
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 003296 794 SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831 (833)
Q Consensus 794 ~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~ 831 (833)
....+.++.+++.+||+.+|++||++++++..|++
T Consensus 219 ---~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 219 ---PEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred ---CCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 01234567899999999999999999999998864
No 252
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.7e-37 Score=330.73 Aligned_cols=252 Identities=16% Similarity=0.231 Sum_probs=199.7
Q ss_pred HhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
+.|+..+.||+|+||.||+|+.. +|+.||+|.+.... ....+.|.+|++++++++||||+++++++..++..++|
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS----EEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIM 87 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC----HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEE
Confidence 45677789999999999999974 68999999984221 22356789999999999999999999999999999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
|||+++|+|..++.+. ...+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||++......
T Consensus 88 ~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 163 (292)
T cd06644 88 IEFCPGGAVDAIMLEL-DRGLTEPQIQVICRQMLEALQYLH---SMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT 163 (292)
T ss_pred EecCCCCcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHh---cCCeeecCCCcceEEEcCCCCEEEccCccceecccc
Confidence 9999999999887643 246899999999999999999999 789999999999999999999999999998764322
Q ss_pred CCCCcccccccccccccccccc-----CCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccc
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAY-----TMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDF 788 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (833)
.. ......|++.|+|||++. ...++.++|||||||++|||++|+.||........ ....... .. +
T Consensus 164 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~-~~~~~~~-~~------~ 233 (292)
T cd06644 164 LQ--RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV-LLKIAKS-EP------P 233 (292)
T ss_pred cc--ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHH-HHHHhcC-CC------c
Confidence 11 123457899999999885 34478899999999999999999999975433221 1111111 00 0
Q ss_pred cccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 789 NVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.... ....+.++.+++.+||+.||++||++.|++++
T Consensus 234 ~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 234 TLSQ----PSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred cCCC----CcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0000 11234467899999999999999999999874
No 253
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=5.6e-38 Score=333.13 Aligned_cols=270 Identities=21% Similarity=0.270 Sum_probs=204.4
Q ss_pred HhcCCccccccCcccEEEEEEcC-----CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEec--C
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP-----SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLA--S 627 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~--~ 627 (833)
+.|...+.||+|+||.||+|+.. ++..||||++...... ...+.|.+|++++++++||||+++++++.. +
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~---~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~ 80 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE---QHRSDFEREIEILRTLDHENIVKYKGVCEKPGG 80 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch---HHHHHHHHHHHHHHhCCCCChheEEeeeecCCC
Confidence 35667789999999999999853 4789999999533221 235689999999999999999999999987 5
Q ss_pred CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceee
Q 003296 628 DSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELC 707 (833)
Q Consensus 628 ~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~ 707 (833)
...++||||+++|+|.+++... ...++|..+..++.|++.||+||| ..+++||||||+||+++.++.+|++|||.+
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 156 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRH-RDQINLKRLLLFSSQICKGMDYLG---SQRYIHRDLAARNILVESEDLVKISDFGLA 156 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhC-ccccCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccccc
Confidence 5799999999999999999864 235999999999999999999999 789999999999999999999999999999
Q ss_pred eeeCCCCCCC-ccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHH-HHHHHhhc--cccccc
Q 003296 708 KVIDPSKSTG-SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELA-KWVLRNSA--QQDKLD 783 (833)
Q Consensus 708 ~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~-~~~~~~~~--~~~~~~ 783 (833)
.......... ......++..|+|||+..+..++.++|||||||++|||+||+.|+....... .+...... ......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05038 157 KVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLL 236 (284)
T ss_pred cccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHH
Confidence 8765322111 1112345667999999988889999999999999999999999986322110 00000000 000000
Q ss_pred ccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhcC
Q 003296 784 HILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNAR 833 (833)
Q Consensus 784 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~r 833 (833)
..+........ ....+.++.+++.+||+.+|++||||.||+++|+++|
T Consensus 237 ~~~~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~ 284 (284)
T cd05038 237 ELLKEGERLPR--PPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR 284 (284)
T ss_pred HHHHcCCcCCC--CccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence 00000110000 1123357889999999999999999999999999886
No 254
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=3.1e-37 Score=326.48 Aligned_cols=256 Identities=21% Similarity=0.293 Sum_probs=201.5
Q ss_pred HhcCCccccccCcccEEEEEEcC-CCc----eEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCc
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP-SGM----SYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDS 629 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~ 629 (833)
..|...+.||+|+||.||+|... +|. .||+|.+..... .....++.+|+.++++++||||++++++|.. +.
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~ 82 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS---PKANKEILDEAYVMASVDHPHVVRLLGICLS-SQ 82 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC---HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-Cc
Confidence 45777899999999999999864 343 589998842211 2234678999999999999999999999987 78
Q ss_pred eEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeee
Q 003296 630 AYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKV 709 (833)
Q Consensus 630 ~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~ 709 (833)
.++||||+++|+|.++++.. ...++|..+..++.|++.|++||| +.+|+||||||+||++++++.+|++|||+++.
T Consensus 83 ~~~v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~ 158 (279)
T cd05057 83 VQLITQLMPLGCLLDYVRNH-KDNIGSQYLLNWCVQIAKGMSYLE---EKRLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (279)
T ss_pred eEEEEecCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHH---hCCEEecccCcceEEEcCCCeEEECCCccccc
Confidence 99999999999999999864 235899999999999999999999 78999999999999999999999999999987
Q ss_pred eCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccc
Q 003296 710 IDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDF 788 (833)
Q Consensus 710 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (833)
..............++..|+|||......++.++|||||||++||+++ |+.||.+.. ..++..... .....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-~~~~~~~~~-~~~~~------ 230 (279)
T cd05057 159 LDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIP-AVEIPDLLE-KGERL------ 230 (279)
T ss_pred ccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCC-HHHHHHHHh-CCCCC------
Confidence 653322211122334678999999988889999999999999999999 999997543 222221111 11100
Q ss_pred cccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 789 NVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
..+ ......+.+++.+||..||++||++.++++.|.++
T Consensus 231 --~~~----~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~ 268 (279)
T cd05057 231 --PQP----PICTIDVYMVLVKCWMIDAESRPTFKELINEFSKM 268 (279)
T ss_pred --CCC----CCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 000 01224577899999999999999999999998864
No 255
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.6e-37 Score=326.48 Aligned_cols=258 Identities=20% Similarity=0.312 Sum_probs=205.3
Q ss_pred hcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
+|+..+.+|.|+||.||+|.. .++..+|+|++..... ....+.+.+|++++++++||||+++++.+..++..++||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 78 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKC---QTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVM 78 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCc---chHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEE
Confidence 577889999999999999996 4788999999842211 114578999999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCC-CCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 635 EYAPKGTLFDVLHGCLE-NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
||+++++|.++++.... ..+++.....++.|++.|++||| +.+|+||||||+||++++++.+|++|||++......
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh---~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~ 155 (267)
T cd06610 79 PYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLH---SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADG 155 (267)
T ss_pred eccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccC
Confidence 99999999999976432 46899999999999999999999 789999999999999999999999999998766543
Q ss_pred CCCC--ccccccccccccccccccCC-cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccc
Q 003296 714 KSTG--SLSTVAGSVGYIPPEYAYTM-RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNV 790 (833)
Q Consensus 714 ~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (833)
.... ......|+..|+|||++... .++.++|||||||++|||++|+.||................... .
T Consensus 156 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--------~ 227 (267)
T cd06610 156 GDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPS--------L 227 (267)
T ss_pred ccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCC--------c
Confidence 2211 12345789999999998766 68999999999999999999999997544322221111111000 0
Q ss_pred cCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 791 SRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 791 ~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.. .......+.++.+++.+||+.||++||++.|++++
T Consensus 228 ~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 228 ET-GADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred CC-ccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 00 00012345678899999999999999999999875
No 256
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=2.3e-37 Score=325.21 Aligned_cols=253 Identities=19% Similarity=0.295 Sum_probs=200.9
Q ss_pred cCCccccccCcccEEEEEEc-CCCceEEEEEccccchhh-----hccChhHHHHHHHHHhcCCCCCcccceEEEecCCce
Q 003296 557 ANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIF-----QLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSA 630 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~ 630 (833)
|.....||+|+||.||+|.. .+++.||+|.+....... .....+.+.+|++++++++||||+++++++...+..
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL 81 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence 45567899999999999987 468999999884321111 111235788999999999999999999999999999
Q ss_pred EEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeee
Q 003296 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVI 710 (833)
Q Consensus 631 ~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~ 710 (833)
++||||+++++|.+++.. ...+++..+..++.|++.||+||| +.+++||||||+||++++++.+|++|||.++..
T Consensus 82 ~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lH---~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~ 156 (267)
T cd06628 82 NIFLEYVPGGSVAALLNN--YGAFEETLVRNFVRQILKGLNYLH---NRGIIHRDIKGANILVDNKGGIKISDFGISKKL 156 (267)
T ss_pred EEEEEecCCCCHHHHHHh--ccCccHHHHHHHHHHHHHHHHHHH---hcCcccccCCHHHEEEcCCCCEEecccCCCccc
Confidence 999999999999999976 346899999999999999999999 788999999999999999999999999999876
Q ss_pred CCCCCCC----ccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccc
Q 003296 711 DPSKSTG----SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHIL 786 (833)
Q Consensus 711 ~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (833)
....... ......|+..|+|||++.+..++.++||||+||++|||++|+.||.+........... . ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~----~----~~ 228 (267)
T cd06628 157 EANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIG----E----NA 228 (267)
T ss_pred ccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHh----c----cC
Confidence 4221110 1123568899999999988889999999999999999999999997544322211100 0 00
Q ss_pred cccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 787 DFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.+... ...+..+.+++.+||+.||++||++.||+++
T Consensus 229 ~~~~~------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 229 SPEIP------SNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred CCcCC------cccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 11111 1234567889999999999999999999874
No 257
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1.9e-37 Score=327.14 Aligned_cols=258 Identities=19% Similarity=0.212 Sum_probs=199.0
Q ss_pred cCCccccccCcccEEEEEEcC----CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCC----
Q 003296 557 ANPLNVELKTRFSTYYKAVMP----SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD---- 628 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~---- 628 (833)
|...+.||+|+||.||+|.+. +|+.||||++.... ......+++.+|++++++++||||+++++++...+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 78 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADI--FSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGR 78 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEecccc--CChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCc
Confidence 456788999999999999853 47899999984221 11223467899999999999999999999987542
Q ss_pred --ceEEEEeeCCCCChhhhhhcCC----CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceec
Q 003296 629 --SAYLFYEYAPKGTLFDVLHGCL----ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIG 702 (833)
Q Consensus 629 --~~~lv~ey~~~g~L~~~l~~~~----~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~ 702 (833)
..++++||+++|+|.+++.... ...+++.....++.|++.|++||| +.+|+||||||+||+++.++.+|++
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~nili~~~~~~kl~ 155 (273)
T cd05074 79 LPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLS---SKNFIHRDLAARNCMLNENMTVCVA 155 (273)
T ss_pred ccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccchhhEEEcCCCCEEEC
Confidence 2478999999999998875321 125789999999999999999999 7889999999999999999999999
Q ss_pred cceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhccccc
Q 003296 703 DIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDK 781 (833)
Q Consensus 703 dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 781 (833)
|||+++...............+++.|++||......++.++|||||||++|||++ |+.||.+.... ....... ....
T Consensus 156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~-~~~~~~~-~~~~ 233 (273)
T cd05074 156 DFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS-EIYNYLI-KGNR 233 (273)
T ss_pred cccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH-HHHHHHH-cCCc
Confidence 9999986543221111223456778999999988889999999999999999999 88998644322 1111111 1111
Q ss_pred ccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhcC
Q 003296 782 LDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNAR 833 (833)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~r 833 (833)
.. .. ...+..+.+++.+||+.+|++||++.|+++.|++++
T Consensus 234 ~~------~~------~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~~ 273 (273)
T cd05074 234 LK------QP------PDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELIW 273 (273)
T ss_pred CC------CC------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhhC
Confidence 00 00 122357889999999999999999999999999875
No 258
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=4.2e-38 Score=334.90 Aligned_cols=249 Identities=14% Similarity=0.230 Sum_probs=199.2
Q ss_pred hcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
.|+....||+|+||.||++.. .++..||||++.... ....+.+.+|+.++++++||||+++++++...+..|+||
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~ 98 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK----QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVM 98 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch----HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEE
Confidence 334456799999999999997 478999999984221 123467899999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
||+++++|.+++.. ..+++.++..++.|++.|++||| +.+|+||||||+||++++++.+|++|||++.......
T Consensus 99 e~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~ 172 (292)
T cd06658 99 EFLEGGALTDIVTH---TRMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV 172 (292)
T ss_pred eCCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEccCcchhhccccc
Confidence 99999999999864 35889999999999999999999 7889999999999999999999999999987653222
Q ss_pred CCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCc
Q 003296 715 STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTS 794 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (833)
. ......|+..|+|||+..+..++.++|||||||++|||++|+.||........... .. ....+....
T Consensus 173 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~-~~-------~~~~~~~~~-- 240 (292)
T cd06658 173 P--KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRR-IR-------DNLPPRVKD-- 240 (292)
T ss_pred c--cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HH-------hcCCCcccc--
Confidence 1 12345789999999999888899999999999999999999999975443221111 00 001111110
Q ss_pred hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 795 LAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 795 ~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.......+.+++.+|++.||++|||++|++++
T Consensus 241 --~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 241 --SHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred --ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 11223467789999999999999999999976
No 259
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=9.4e-38 Score=331.79 Aligned_cols=264 Identities=17% Similarity=0.240 Sum_probs=202.7
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
+|+..+.||+|+||.||+|... +|+.||+|++..... .....+.+.+|++++++++||||+++++++..++..|+||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESED--DKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVF 79 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccC--cchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEE
Confidence 4677899999999999999985 689999999842211 1223567889999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
||+++++|.++... ...++|.++..++.|+++||+||| +.+|+|||+||+||++++++.+|++|||++.......
T Consensus 80 e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07846 80 EFVDHTVLDDLEKY--PNGLDESRVRKYLFQILRGIEFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 154 (286)
T ss_pred ecCCccHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc
Confidence 99999999887764 335899999999999999999999 7789999999999999999999999999998764332
Q ss_pred CCCccccccccccccccccccC-CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccc-------------
Q 003296 715 STGSLSTVAGSVGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQD------------- 780 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~------------- 780 (833)
. ......|+..|+|||++.+ ..++.++|||||||++|||++|++||........+.........
T Consensus 155 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07846 155 E--VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNP 232 (286)
T ss_pred c--ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccch
Confidence 1 2234568999999998875 44788999999999999999999999755443322211110000
Q ss_pred cccccccccccCCch---hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 781 KLDHILDFNVSRTSL---AVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 781 ~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.......+....... .....+..+.+++.+||+.+|++||++.|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 233 LFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred HhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 000000000000000 011234578899999999999999999999875
No 260
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=3.3e-38 Score=330.22 Aligned_cols=253 Identities=24% Similarity=0.336 Sum_probs=199.9
Q ss_pred cCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEe
Q 003296 557 ANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYE 635 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 635 (833)
|+..+.||+|+||+||+|... +++.||+|++....... .......+|++++++++||||+++++++...+..++|||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~ 78 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEE--EEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVME 78 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHH--HHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccc--cccchhhhhhhcccccccccccccccccccccccccccc
Confidence 445689999999999999975 67799999995332211 122344669999999999999999999999999999999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCC
Q 003296 636 YAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715 (833)
Q Consensus 636 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~ 715 (833)
|+++++|.+++.. ...+++..+..++.|+++||+||| +.+|+||||||+||++++++.++++|||.+......
T Consensus 79 ~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~Lh---~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~-- 151 (260)
T PF00069_consen 79 YCPGGSLQDYLQK--NKPLSEEEILKIAYQILEALAYLH---SKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSEN-- 151 (260)
T ss_dssp EETTEBHHHHHHH--HSSBBHHHHHHHHHHHHHHHHHHH---HTTEEESSBSGGGEEESTTSEEEESSGTTTEESTST--
T ss_pred ccccccccccccc--cccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccc--
Confidence 9999999999983 456899999999999999999999 779999999999999999999999999998864211
Q ss_pred CCcccccccccccccccccc-CCcccccCcchhhHHHHHHHHhCCCcccCCccHH--HHHHHhhcccccccccccccccC
Q 003296 716 TGSLSTVAGSVGYIPPEYAY-TMRVTMAGNVYSFGVILLELLTGKTAVNQGNELA--KWVLRNSAQQDKLDHILDFNVSR 792 (833)
Q Consensus 716 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 792 (833)
........||..|+|||++. +..++.++||||+|+++|||++|+.||....... ......... . ......
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~--~----~~~~~~- 224 (260)
T PF00069_consen 152 NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKR--P----LPSSSQ- 224 (260)
T ss_dssp TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHT--H----HHHHTT-
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccc--c----cccccc-
Confidence 12334578999999999988 7889999999999999999999999998652111 111111100 0 000000
Q ss_pred CchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 793 TSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 793 ~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.......++.+++.+||+.||++||++.|++++
T Consensus 225 ---~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 225 ---QSREKSEELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp ---SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred ---ccchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 000112678899999999999999999999864
No 261
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=5.3e-38 Score=333.32 Aligned_cols=263 Identities=19% Similarity=0.246 Sum_probs=199.1
Q ss_pred cCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEe
Q 003296 557 ANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYE 635 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 635 (833)
|+..+.||+|+||.||+|... +|..||+|++.... ........+.+|++++++++||||+++++++.+.+..++|+|
T Consensus 2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~--~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (284)
T cd07839 2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD--DDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFE 79 (284)
T ss_pred ceeEEEecccCCeEEEEEEECCCCcEEEEEEeeccc--ccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEe
Confidence 667789999999999999974 79999999984321 122334578899999999999999999999999999999999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCC
Q 003296 636 YAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715 (833)
Q Consensus 636 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~ 715 (833)
|++ |+|.+++... ...+++..+..++.|+++||.||| ..+|+||||||+||+++.++.+|++|||+++.......
T Consensus 80 ~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 154 (284)
T cd07839 80 YCD-QDLKKYFDSC-NGDIDPEIVKSFMFQLLKGLAFCH---SHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR 154 (284)
T ss_pred cCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCC
Confidence 997 5888887643 345899999999999999999999 78999999999999999999999999999986543221
Q ss_pred CCccccccccccccccccccCC-cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccc--------cccccc
Q 003296 716 TGSLSTVAGSVGYIPPEYAYTM-RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQD--------KLDHIL 786 (833)
Q Consensus 716 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~--------~~~~~~ 786 (833)
......+++.|+|||++.+. .++.++|||||||++|||+||+.|+..+.+............. ......
T Consensus 155 --~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd07839 155 --CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLP 232 (284)
T ss_pred --CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcc
Confidence 12345678999999988764 4789999999999999999999987544433222211110000 000000
Q ss_pred ccc----ccCCc---hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 787 DFN----VSRTS---LAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 787 ~~~----~~~~~---~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
+.. ..... ........++.+++.+||+.||++|||++|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 233 DYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred cccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 000 00000 0011234577899999999999999999999875
No 262
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=2.4e-37 Score=326.87 Aligned_cols=249 Identities=17% Similarity=0.274 Sum_probs=202.6
Q ss_pred HhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
..|+..+.||+|+||.||+|... ++..||+|.+..... ....+.|.+|++++++++||||+++++++.++...++|
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA---EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWII 80 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 45667788999999999999974 689999999842211 12346799999999999999999999999999999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
|||+++|+|.+++.. ..+++.+...++.|++.|++|+| ..+++|+||+|+||+++.++.++++|||++......
T Consensus 81 ~e~~~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh---~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06640 81 MEYLGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT 154 (277)
T ss_pred EecCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCccCcCCChhhEEEcCCCCEEEcccccceeccCC
Confidence 999999999999874 35889999999999999999999 789999999999999999999999999999876433
Q ss_pred CCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCC
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRT 793 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (833)
.. ......|+..|+|||++.+..++.++|||||||++|||+||+.||.+..... ..... .. . ..
T Consensus 155 ~~--~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~-~~~~~-~~-~---------~~-- 218 (277)
T cd06640 155 QI--KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR-VLFLI-PK-N---------NP-- 218 (277)
T ss_pred cc--ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh-Hhhhh-hc-C---------CC--
Confidence 21 1233568899999999988889999999999999999999999997543221 11100 00 0 00
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 794 SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 794 ~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.......+..+.+++.+||+.+|++||++.|++++
T Consensus 219 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 219 PTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred CCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 01112345678899999999999999999999876
No 263
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=9e-38 Score=330.82 Aligned_cols=252 Identities=17% Similarity=0.248 Sum_probs=200.6
Q ss_pred HhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
++|+..+.||+|+||.||+|... ++..||+|.+.... ....+.|.+|++++++++||||+++++++..++..|+|
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIES----EEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWIL 80 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC----HHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Confidence 45777889999999999999974 78999999984221 12346799999999999999999999999999999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
|||+++|+|.+++... ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+|++|||++......
T Consensus 81 ~e~~~~~~L~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 156 (280)
T cd06611 81 IEFCDGGALDSIMLEL-ERGLTEPQIRYVCRQMLEALNFLH---SHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKST 156 (280)
T ss_pred eeccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEECCCCCEEEccCccchhhccc
Confidence 9999999999998753 346899999999999999999999 788999999999999999999999999988755322
Q ss_pred CCCCcccccccccccccccccc-----CCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccc
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAY-----TMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDF 788 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (833)
.. ......||+.|+|||++. ...++.++|||||||++|||++|+.||......... ...... .. +
T Consensus 157 ~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~-~~------~ 226 (280)
T cd06611 157 LQ--KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVL-LKILKS-EP------P 226 (280)
T ss_pred cc--ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHH-HHHhcC-CC------C
Confidence 21 123457899999999874 344778999999999999999999999754332211 111110 00 0
Q ss_pred cccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 789 NVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.... ....+.++.+++.+||+.||++||++.+|+++
T Consensus 227 ~~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 227 TLDQ----PSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred CcCC----cccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 0000 11233467889999999999999999999875
No 264
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=2.2e-37 Score=326.37 Aligned_cols=258 Identities=21% Similarity=0.302 Sum_probs=201.4
Q ss_pred cCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhh------ccChhHHHHHHHHHhcCCCCCcccceEEEecCCc
Q 003296 557 ANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQ------LGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDS 629 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~------~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~ 629 (833)
|...+.||+|+||.||+|.. .+|+.||||+++....... ....+.+.+|++++++++||||+++++++...+.
T Consensus 3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 82 (272)
T cd06629 3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY 82 (272)
T ss_pred eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence 45668999999999999986 4789999998842211111 1123568899999999999999999999999999
Q ss_pred eEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeee
Q 003296 630 AYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKV 709 (833)
Q Consensus 630 ~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~ 709 (833)
.++||||+++|+|.+++++. ..+++..+..++.|++.||.||| +.+++||||||+||+++.++.+|++|||+++.
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~ 157 (272)
T cd06629 83 LSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLH---SKGILHRDLKADNLLVDADGICKISDFGISKK 157 (272)
T ss_pred eEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHh---hCCeeecCCChhhEEEcCCCeEEEeecccccc
Confidence 99999999999999999863 46899999999999999999999 78899999999999999999999999999976
Q ss_pred eCCCCCCCccccccccccccccccccCCc--ccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccccccc
Q 003296 710 IDPSKSTGSLSTVAGSVGYIPPEYAYTMR--VTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILD 787 (833)
Q Consensus 710 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (833)
..............|+..|+|||++.... ++.++|||||||++||+++|+.||........+....... ....+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~ 234 (272)
T cd06629 158 SDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKR---SAPPIP 234 (272)
T ss_pred ccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccc---cCCcCC
Confidence 54322111223457899999999987654 8899999999999999999999997544433222111100 000111
Q ss_pred ccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 788 FNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
... ....+.++.+++.+||+.||++|||++||+++
T Consensus 235 ~~~------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 235 PDV------SMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred ccc------cccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 110 11234578899999999999999999999875
No 265
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.8e-37 Score=329.59 Aligned_cols=256 Identities=16% Similarity=0.212 Sum_probs=200.5
Q ss_pred HHHHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEe----
Q 003296 552 AMEAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVL---- 625 (833)
Q Consensus 552 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~---- 625 (833)
.+.++|+..+.||+|+||.||+|.. .+|+.||+|++.... ....++.+|+.+++++ +||||++++++|.
T Consensus 15 ~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 89 (286)
T cd06638 15 DPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-----DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDV 89 (286)
T ss_pred CcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-----chHHHHHHHHHHHHHHhcCCCeeeeeeeeeeccc
Confidence 5667888999999999999999997 478999999884211 1235688999999999 6999999999985
Q ss_pred -cCCceEEEEeeCCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceec
Q 003296 626 -ASDSAYLFYEYAPKGTLFDVLHGC--LENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIG 702 (833)
Q Consensus 626 -~~~~~~lv~ey~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~ 702 (833)
..+..++||||+++|+|.++++.. ....+++..+..++.|+++||.||| +.+|+||||||+||++++++.+|++
T Consensus 90 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~kl~ 166 (286)
T cd06638 90 KNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLH---VNKTIHRDVKGNNILLTTEGGVKLV 166 (286)
T ss_pred CCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHH---hCCccccCCCHHhEEECCCCCEEEc
Confidence 345689999999999999988642 2346889999999999999999999 7899999999999999999999999
Q ss_pred cceeeeeeCCCCCCCccccccccccccccccccC-----CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhc
Q 003296 703 DIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYT-----MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSA 777 (833)
Q Consensus 703 dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 777 (833)
|||+++....... ......|++.|+|||++.. ..++.++||||+||++|||++|+.||.............
T Consensus 167 dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~-- 242 (286)
T cd06638 167 DFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIP-- 242 (286)
T ss_pred cCCceeecccCCC--ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhcc--
Confidence 9999987643221 1234579999999998753 447899999999999999999999997554332221110
Q ss_pred ccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 003296 778 QQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRML 829 (833)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L 829 (833)
. .......++ .....++.+++.+||+.||++|||+.||+++.
T Consensus 243 ~-~~~~~~~~~---------~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 243 R-NPPPTLHQP---------ELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred c-cCCCcccCC---------CCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 0 000000000 01234678899999999999999999999874
No 266
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-39 Score=366.19 Aligned_cols=251 Identities=22% Similarity=0.304 Sum_probs=203.8
Q ss_pred CCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEee
Q 003296 558 NPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEY 636 (833)
Q Consensus 558 ~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey 636 (833)
.....||.|.||.||-|.. .+|...|||-++-.... ....+...+|+.++..++|||+|++||+-.+++..+|.|||
T Consensus 1238 qrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~--~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEy 1315 (1509)
T KOG4645|consen 1238 QRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD--HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEY 1315 (1509)
T ss_pred ccccccCCcceeeeEEeecCCccchhhhhhhhcCccc--cccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHH
Confidence 4578999999999999995 68999999988532221 44567789999999999999999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCC
Q 003296 637 APKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKST 716 (833)
Q Consensus 637 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~ 716 (833)
|++|+|.+.+.. ++..++.....+..|++.|++||| +.+||||||||+||++|.+|.+|.+|||.|+.+.....+
T Consensus 1316 C~~GsLa~ll~~--gri~dE~vt~vyt~qll~gla~LH---~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~ 1390 (1509)
T KOG4645|consen 1316 CEGGSLASLLEH--GRIEDEMVTRVYTKQLLEGLAYLH---EHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQT 1390 (1509)
T ss_pred hccCcHHHHHHh--cchhhhhHHHHHHHHHHHHHHHHH---hcCceecCCCccceeeecCCcEEeecccceeEecCchhc
Confidence 999999999975 455777777788999999999999 889999999999999999999999999999887544311
Q ss_pred --CccccccccccccccccccCCc---ccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccccccccccc
Q 003296 717 --GSLSTVAGSVGYIPPEYAYTMR---VTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVS 791 (833)
Q Consensus 717 --~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (833)
.......||+.|||||++.+.+ ...++||||+|||+.||+||+.||..-+. +|........+.
T Consensus 1391 ~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn--e~aIMy~V~~gh---------- 1458 (1509)
T KOG4645|consen 1391 MPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN--EWAIMYHVAAGH---------- 1458 (1509)
T ss_pred CCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc--hhHHHhHHhccC----------
Confidence 2234578999999999997644 45789999999999999999999974332 233222111111
Q ss_pred CCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 792 RTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 792 ~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.+..+...+.+..+++.+|++.||++|.++.|++++
T Consensus 1459 -~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1459 -KPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred -CCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 111223466788899999999999999999988875
No 267
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=2e-37 Score=330.16 Aligned_cols=264 Identities=16% Similarity=0.252 Sum_probs=198.1
Q ss_pred HhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
+.|+..+.||+|+||.||+|..+ +|+.||||.+.... .......+.+|++++++++||||+++++++..++..++|
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEH---EEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLV 81 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccc---ccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEE
Confidence 45777889999999999999975 78999999984221 112235678999999999999999999999999999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
|||+++ +|.+++.... ..+++.....++.|+++||.||| +.+|+||||||+||+++.++.+|++|||+++.....
T Consensus 82 ~e~~~~-~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 156 (291)
T cd07844 82 FEYLDT-DLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCH---QRRVLHRDLKPQNLLISERGELKLADFGLARAKSVP 156 (291)
T ss_pred EecCCC-CHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCHHHEEEcCCCCEEECccccccccCCC
Confidence 999985 9999987542 36899999999999999999999 789999999999999999999999999998754322
Q ss_pred CCCCccccccccccccccccccC-CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcc-----ccccccc--
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQ-----QDKLDHI-- 785 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~-----~~~~~~~-- 785 (833)
.. ......++..|+|||++.+ ..++.++||||+||++|||++|+.||.+.....+........ .+.....
T Consensus 157 ~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (291)
T cd07844 157 SK--TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSS 234 (291)
T ss_pred Cc--cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhh
Confidence 11 1123457889999998875 458899999999999999999999997544222211111000 0000000
Q ss_pred ----cccccc--CCchh-----HHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 786 ----LDFNVS--RTSLA-----VRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 786 ----~~~~~~--~~~~~-----~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
...... ..... .......+.+++.+|++.+|++|||+.|++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 235 NPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred ccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 000000 00000 00112567899999999999999999999864
No 268
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=3.2e-37 Score=321.95 Aligned_cols=250 Identities=22% Similarity=0.312 Sum_probs=202.1
Q ss_pred cCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEe
Q 003296 557 ANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYE 635 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 635 (833)
|...+.||+|+||.||+|.. .+++.+|||++.... ......+.+.+|++++++++||||+++++.+..++..++|||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08220 2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQ--MTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVME 79 (256)
T ss_pred ceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccc--cccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEe
Confidence 66778999999999999997 478999999984321 122335689999999999999999999999999999999999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCC-CCceeccceeeeeeCCCC
Q 003296 636 YAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSL-KEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 636 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~-~~~ki~dfgl~~~~~~~~ 714 (833)
|+++|+|.+++.......+++..+..++.|+++|++||| +.+|+||||||+||+++++ +.+|++|||+++......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (256)
T cd08220 80 YAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVH---TKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS 156 (256)
T ss_pred cCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc
Confidence 999999999998654556899999999999999999999 7899999999999999855 467999999998764332
Q ss_pred CCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCc
Q 003296 715 STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTS 794 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (833)
. .....|+..|+|||++.+..++.++|||||||++|||++|+.||...... ..+...... ....+ .
T Consensus 157 ~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~-~~~~~~~~~--~~~~~-----~--- 222 (256)
T cd08220 157 K---AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP-ALVLKIMSG--TFAPI-----S--- 222 (256)
T ss_pred c---ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH-HHHHHHHhc--CCCCC-----C---
Confidence 1 13457899999999998888999999999999999999999999754322 222111111 00000 0
Q ss_pred hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 795 LAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 795 ~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
...+.++.+++.+||+.||++|||++|++++
T Consensus 223 ---~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 223 ---DRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred ---CCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 1234467899999999999999999999875
No 269
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=2e-37 Score=330.12 Aligned_cols=265 Identities=17% Similarity=0.189 Sum_probs=198.4
Q ss_pred HHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEE
Q 003296 554 EAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYL 632 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 632 (833)
++.|...+.||+|+||.||+|.. .+|..||+|++.... .......+.+|++++++++|+||+++++++..++..|+
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l 80 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKT---EEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTF 80 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccC---cCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEE
Confidence 45788889999999999999986 478999999984221 12234568899999999999999999999999999999
Q ss_pred EEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCC
Q 003296 633 FYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDP 712 (833)
Q Consensus 633 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~ 712 (833)
||||++ +++.+++... ...+++..+..++.|+++||+||| ..+|+||||||+||+++.++.+|++|||+++....
T Consensus 81 v~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 155 (291)
T cd07870 81 VFEYMH-TDLAQYMIQH-PGGLHPYNVRLFMFQLLRGLAYIH---GQHILHRDLKPQNLLISYLGELKLADFGLARAKSI 155 (291)
T ss_pred EEeccc-CCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEEcCCCcEEEeccccccccCC
Confidence 999996 6887776543 245788889999999999999999 77899999999999999999999999999876432
Q ss_pred CCCCCccccccccccccccccccCC-cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccc-----------
Q 003296 713 SKSTGSLSTVAGSVGYIPPEYAYTM-RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQD----------- 780 (833)
Q Consensus 713 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~----------- 780 (833)
... ......+++.|+|||++.+. .++.++|||||||++|||++|+.||.......+..........
T Consensus 156 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (291)
T cd07870 156 PSQ--TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVS 233 (291)
T ss_pred CCC--CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhh
Confidence 221 12345679999999998754 5788999999999999999999999754432221111100000
Q ss_pred ----cccccccccccCCchh---HHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 781 ----KLDHILDFNVSRTSLA---VRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 781 ----~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
................ .......+.+++.+|++.||++|||+.|++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 234 KLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred hcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 0000000000000000 00123567799999999999999999999864
No 270
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=3.4e-37 Score=322.35 Aligned_cols=238 Identities=19% Similarity=0.278 Sum_probs=189.0
Q ss_pred cccccCcccEEEEEEcCC-C----------ceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCc
Q 003296 561 NVELKTRFSTYYKAVMPS-G----------MSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDS 629 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~~~-~----------~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~ 629 (833)
+.||+|+||.||+|...+ + ..||+|.+.... .....|.+|++++++++||||+++++++.. +.
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~ 74 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH-----RDSLAFFETASLMSQLSHKHLVKLYGVCVR-DE 74 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch-----hhHHHHHHHHHHHHcCCCcchhheeeEEec-CC
Confidence 468999999999999853 3 257778773211 115789999999999999999999999988 78
Q ss_pred eEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCC-------Cceec
Q 003296 630 AYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLK-------EPQIG 702 (833)
Q Consensus 630 ~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~-------~~ki~ 702 (833)
.++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+|++
T Consensus 75 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~ 150 (259)
T cd05037 75 NIMVEEYVKFGPLDVFLHREK-NNVSLHWKLDVAKQLASALHYLE---DKKLVHGNVCGKNILVARYGLNEGYVPFIKLS 150 (259)
T ss_pred cEEEEEcCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHh---hCCeecccCccceEEEecCccccCCceeEEeC
Confidence 899999999999999998632 26899999999999999999999 78999999999999999887 79999
Q ss_pred cceeeeeeCCCCCCCccccccccccccccccccCC--cccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhccc
Q 003296 703 DIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTM--RVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQ 779 (833)
Q Consensus 703 dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 779 (833)
|||++...... ....++..|+|||++.+. .++.++|||||||++|||++ |..||..... ..+.......
T Consensus 151 Dfg~a~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~-~~~~~~~~~~- 222 (259)
T cd05037 151 DPGIPITVLSR------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS-SEKERFYQDQ- 222 (259)
T ss_pred CCCcccccccc------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCc-hhHHHHHhcC-
Confidence 99998865431 234577889999998876 78999999999999999999 5777764321 1111111100
Q ss_pred ccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 003296 780 DKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLL 830 (833)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~ 830 (833)
. ..... ....+.+++.+||+.+|++|||+.||++.|.
T Consensus 223 ~--------~~~~~------~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 223 H--------RLPMP------DCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred C--------CCCCC------CchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0 00000 0157789999999999999999999999873
No 271
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=4.1e-37 Score=322.39 Aligned_cols=254 Identities=16% Similarity=0.221 Sum_probs=203.8
Q ss_pred HhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
++|+..+.+|+|+||.||+|... +++.+|+|.+.... ....+.+.+|++++++++||||+++++++...+..|+|
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~----~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~ 78 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP----GDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIV 78 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc----hhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEE
Confidence 45778889999999999999974 68899999984221 12457899999999999999999999999999999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
|||+++++|.+++... ...+++.++..++.|++.|++||| ..+|+||||||+||++++++.+|++|||++......
T Consensus 79 ~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~ 154 (262)
T cd06613 79 MEYCGGGSLQDIYQVT-RGPLSELQIAYVCRETLKGLAYLH---ETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTAT 154 (262)
T ss_pred EeCCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHH---hCCceecCCChhhEEECCCCCEEECccccchhhhhh
Confidence 9999999999998753 246899999999999999999999 788999999999999999999999999998765432
Q ss_pred CCCCccccccccccccccccccCC---cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccc
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTM---RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNV 790 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (833)
.. ......|+..|+|||++.+. .++.++|||||||++|||+||+.||.+............ . ... ....
T Consensus 155 ~~--~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~-~--~~~---~~~~ 226 (262)
T cd06613 155 IA--KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISK-S--NFP---PPKL 226 (262)
T ss_pred hh--ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-c--cCC---Cccc
Confidence 21 12345789999999998776 789999999999999999999999975443222111110 0 000 0000
Q ss_pred cCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 791 SRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 791 ~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
......+.++.+++.+||+.+|.+|||+.||+.+
T Consensus 227 ----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 227 ----KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred ----cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0112345678899999999999999999999864
No 272
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.5e-37 Score=328.56 Aligned_cols=253 Identities=19% Similarity=0.275 Sum_probs=199.1
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
+|+..+.||+|+||.||+|... +|..||+|.+.... .......|.+|++++++++||||+++++++..++..++||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL---DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCM 78 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc---CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEE
Confidence 4667889999999999999975 79999999984221 1122467999999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 635 EYAPKGTLFDVLHGCL-ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
||+++++|.++++... ...+++..+..++.|++.||.|||+ ..+|+||||||+||+++.++.+|++|||++......
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 156 (286)
T cd06622 79 EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE--EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS 156 (286)
T ss_pred eecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh--cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC
Confidence 9999999999987532 2368999999999999999999994 358999999999999999999999999998765322
Q ss_pred CCCCccccccccccccccccccCC------cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccccccc
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTM------RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILD 787 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (833)
. .....|++.|+|||++.+. .++.++|||||||++|||++|+.||...... .+..... .+.+
T Consensus 157 ~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~~~-------~~~~ 224 (286)
T cd06622 157 L----AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYA-NIFAQLS-------AIVD 224 (286)
T ss_pred c----cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchh-hHHHHHH-------HHhh
Confidence 2 1345688999999988543 3588999999999999999999999643221 1111100 0001
Q ss_pred ccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 788 FNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
..... .......++.+++.+||+.+|++||+++|++.+
T Consensus 225 ~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 225 GDPPT---LPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred cCCCC---CCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 00000 011245577899999999999999999999875
No 273
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.5e-38 Score=334.20 Aligned_cols=250 Identities=19% Similarity=0.259 Sum_probs=206.0
Q ss_pred HHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEE
Q 003296 554 EAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYL 632 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 632 (833)
...|.....||+|.|+.|..|+. .+|..||||.+.+. .......+.+.+|+++|..++|||||+++.+...+..+|+
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt--~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl 132 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKT--QLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL 132 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhc--ccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence 34577788999999999999997 48999999999422 2223334569999999999999999999999999999999
Q ss_pred EEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCC
Q 003296 633 FYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDP 712 (833)
Q Consensus 633 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~ 712 (833)
||||+.+|.+++++.+. +......+..++.|+.+|++||| ...|||||||++||||+.++.+||+|||++..+..
T Consensus 133 V~eya~~ge~~~yl~~~--gr~~e~~ar~~F~q~vsaveYcH---~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~ 207 (596)
T KOG0586|consen 133 VMEYASGGELFDYLVKH--GRMKEKEARAKFRQIVSAVEYCH---SKNIVHRDLKAENILLDENMNIKIADFGFSTFFDY 207 (596)
T ss_pred EEEeccCchhHHHHHhc--ccchhhhhhhhhHHHHHHHHHHh---hcceeccccchhhcccccccceeeeccccceeecc
Confidence 99999999999999873 34555788889999999999999 88899999999999999999999999999998864
Q ss_pred CCCCCccccccccccccccccccCCccc-ccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccccccccccc
Q 003296 713 SKSTGSLSTVAGSVGYIPPEYAYTMRVT-MAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVS 791 (833)
Q Consensus 713 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (833)
.. ...+.+|++.|.|||++.+.+|+ +++|+||+||++|-|+.|..||++..- ... -++++-..++
T Consensus 208 ~~---~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l-k~L----------r~rvl~gk~r 273 (596)
T KOG0586|consen 208 GL---MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNL-KEL----------RPRVLRGKYR 273 (596)
T ss_pred cc---cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccc-ccc----------cchheeeeec
Confidence 43 34678999999999999998885 899999999999999999999985431 110 0111111111
Q ss_pred CCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 792 RTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 792 ~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
-+ .-...++.+++.+++..+|.+|+++++|.++
T Consensus 274 Ip----~~ms~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 274 IP----FYMSCDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred cc----ceeechhHHHHHHhhccCccccCCHHHhhhh
Confidence 11 1234567799999999999999999999875
No 274
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=8.1e-38 Score=333.60 Aligned_cols=245 Identities=15% Similarity=0.229 Sum_probs=197.5
Q ss_pred ccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEeeCC
Q 003296 560 LNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAP 638 (833)
Q Consensus 560 ~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey~~ 638 (833)
...||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++..++..|+||||++
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~----~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~ 101 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRK----QQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQ 101 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecc----cchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCC
Confidence 457999999999999974 78999999984221 2335678999999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCc
Q 003296 639 KGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGS 718 (833)
Q Consensus 639 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~ 718 (833)
+|+|.+++.. ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++........ .
T Consensus 102 ~~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~--~ 173 (297)
T cd06659 102 GGALTDIVSQ---TRLNEEQIATVCESVLQALCYLH---SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP--K 173 (297)
T ss_pred CCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccc--c
Confidence 9999998764 35899999999999999999999 78899999999999999999999999999875533221 1
Q ss_pred cccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchhHH
Q 003296 719 LSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVR 798 (833)
Q Consensus 719 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (833)
.....|+..|+|||++.+..++.++|||||||++|||++|+.||.......... ..... .... .. ...
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~-~~~~~--~~~~-----~~----~~~ 241 (297)
T cd06659 174 RKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK-RLRDS--PPPK-----LK----NAH 241 (297)
T ss_pred ccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHhcc--CCCC-----cc----ccC
Confidence 234679999999999988889999999999999999999999997544322211 11100 0000 00 001
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 799 SQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 799 ~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.....+.+++.+||+.+|++||+++|++++
T Consensus 242 ~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 242 KISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred CCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 123457789999999999999999999985
No 275
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=2.7e-37 Score=333.14 Aligned_cols=256 Identities=19% Similarity=0.217 Sum_probs=204.6
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
+|+..+.||+|+||.||+|... +|+.||+|.+... ........+.+.+|++++++++||||+++++++...+..|+||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKK-EMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEecc-ccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 5777889999999999999975 5999999999532 2222224567999999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
||+++|+|.+++.......+++..+..++.|+++||+||| ..+++||||||+||+++.++.++++|||++.......
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLH---LLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence 9999999999998654457899999999999999999999 7899999999999999999999999999987543221
Q ss_pred CC---------------------------CccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCcc
Q 003296 715 ST---------------------------GSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNE 767 (833)
Q Consensus 715 ~~---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~ 767 (833)
.. .......||..|+|||++.+..++.++|||||||++|||++|+.||.+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 10 011234689999999999888899999999999999999999999975544
Q ss_pred HHHHHHHhhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCC----HHHHHHH
Q 003296 768 LAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPK----MKSVLRM 828 (833)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps----~~evl~~ 828 (833)
...+.... .. ...... ....+.++.+++.+||+.||++||| ++|++.+
T Consensus 238 ~~~~~~~~-~~----------~~~~~~--~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 238 DETFSNIL-KK----------EVTFPG--SPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred HHHHHHHh-cC----------CccCCC--ccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 33222111 00 000000 0113567889999999999999999 7777764
No 276
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=4.2e-37 Score=324.77 Aligned_cols=257 Identities=21% Similarity=0.316 Sum_probs=201.9
Q ss_pred HhcCCccccccCcccEEEEEEcC------CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCC
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP------SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD 628 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~ 628 (833)
.+|.....+|+|+||.||+|+.. +.+.||+|.+..... ....++|.+|++++++++||||+++++++.+.+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 81 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKD---ENLQSEFRRELDMFRKLSHKNVVRLLGLCREAE 81 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccc---hHHHHHHHHHHHHHHhcCCcceeeeEEEECCCC
Confidence 46778889999999999999863 346799998842211 113467999999999999999999999999999
Q ss_pred ceEEEEeeCCCCChhhhhhcCCC-------CCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCcee
Q 003296 629 SAYLFYEYAPKGTLFDVLHGCLE-------NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQI 701 (833)
Q Consensus 629 ~~~lv~ey~~~g~L~~~l~~~~~-------~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki 701 (833)
..++||||+++|+|.++++.... ..++|..+..++.|++.||+||| +.+|+||||||+||+++.++.+|+
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l 158 (275)
T cd05046 82 PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS---NARFVHRDLAARNCLVSSQREVKV 158 (275)
T ss_pred cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhh---hcCcccCcCccceEEEeCCCcEEE
Confidence 99999999999999999975431 15899999999999999999999 788999999999999999999999
Q ss_pred ccceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccc
Q 003296 702 GDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQD 780 (833)
Q Consensus 702 ~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 780 (833)
+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |..||...... ..+...... .
T Consensus 159 ~~~~~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~-~~~~~~~~~-~ 235 (275)
T cd05046 159 SLLSLSKDVYNSEY-YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE-EVLNRLQAG-K 235 (275)
T ss_pred cccccccccCcccc-cccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH-HHHHHHHcC-C
Confidence 99999875432211 11233467888999999888888999999999999999999 78898643322 111111100 0
Q ss_pred cccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 003296 781 KLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831 (833)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~ 831 (833)
.... .. ...+..+.+++.+||+.+|++||++.|++++|.+
T Consensus 236 -~~~~----~~------~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 236 -LELP----VP------EGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred -cCCC----CC------CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 0000 00 1223468899999999999999999999999863
No 277
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=4e-37 Score=323.03 Aligned_cols=254 Identities=17% Similarity=0.219 Sum_probs=197.7
Q ss_pred hcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhh-hccChhHHHHHHHHHhcCCCCCcccceEEEecC--CceE
Q 003296 556 VANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIF-QLGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS--DSAY 631 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~--~~~~ 631 (833)
+|+..+.||+|+||.||+|.. .+|..||||++....... .....+.+.+|++++++++||||+++++++.+. ..++
T Consensus 3 ~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (265)
T cd06652 3 NWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLS 82 (265)
T ss_pred cceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEE
Confidence 577789999999999999997 468999999884221111 112245788999999999999999999998764 4688
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeC
Q 003296 632 LFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711 (833)
Q Consensus 632 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~ 711 (833)
+||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+|+||||+||+++.++.+|++|||+++...
T Consensus 83 ~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~ 157 (265)
T cd06652 83 IFMEHMPGGSIKDQLKSY--GALTENVTRKYTRQILEGVSYLH---SNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQ 157 (265)
T ss_pred EEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEecCCCCEEECcCccccccc
Confidence 999999999999999753 35788889999999999999999 7889999999999999999999999999987653
Q ss_pred CCCCC-CccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccc
Q 003296 712 PSKST-GSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNV 790 (833)
Q Consensus 712 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (833)
..... .......|+..|+|||++.+..++.++|||||||++|||++|+.||.......... ..... .. .+.
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~-~~~~~-~~-----~~~- 229 (265)
T cd06652 158 TICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIF-KIATQ-PT-----NPV- 229 (265)
T ss_pred cccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHH-HHhcC-CC-----CCC-
Confidence 21111 11234568999999999988889999999999999999999999997543322211 11111 00 000
Q ss_pred cCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 791 SRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 791 ~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.+......+.+++.+|+. +|++||+++||+++
T Consensus 230 -----~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 230 -----LPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred -----CchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 112334567788999985 99999999999875
No 278
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-38 Score=309.57 Aligned_cols=253 Identities=20% Similarity=0.211 Sum_probs=204.9
Q ss_pred HHHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceE
Q 003296 553 MEAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAY 631 (833)
Q Consensus 553 ~~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~ 631 (833)
..++|+..+++|+|.||.|-.++- .+|+.+|+|+++ +.-+........-..|-++|+..+||.+..+...|+.++.+|
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlk-KeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlC 244 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILK-KEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLC 244 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhh-hhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEE
Confidence 346788899999999999999986 489999999995 333333334556778999999999999999999999999999
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeC
Q 003296 632 LFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711 (833)
Q Consensus 632 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~ 711 (833)
.||||+.||.|+-+|.. .+.+++.+...+-.+|+.||.||| +.+||.||+|.+|.|+|++|++||+|||+|+.--
T Consensus 245 FVMeyanGGeLf~HLsr--er~FsE~RtRFYGaEIvsAL~YLH---s~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I 319 (516)
T KOG0690|consen 245 FVMEYANGGELFFHLSR--ERVFSEDRTRFYGAEIVSALGYLH---SRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEI 319 (516)
T ss_pred EEEEEccCceEeeehhh--hhcccchhhhhhhHHHHHHhhhhh---hCCeeeeechhhhheeccCCceEeeecccchhcc
Confidence 99999999999999976 556888888899999999999999 7899999999999999999999999999998643
Q ss_pred CCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccccccccccc
Q 003296 712 PSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVS 791 (833)
Q Consensus 712 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (833)
... ..+.++||||.|.|||++....|+.++|+|.+|||+|||++|+.||.....-. ........ .++
T Consensus 320 ~~g--~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~k-LFeLIl~e----------d~k 386 (516)
T KOG0690|consen 320 KYG--DTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEK-LFELILME----------DLK 386 (516)
T ss_pred ccc--ceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhH-HHHHHHhh----------hcc
Confidence 222 24578999999999999999999999999999999999999999998543311 11111111 111
Q ss_pred CCchhHHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 003296 792 RTSLAVRSQMLTVLKVAVACVSVSPEARP-----KMKSVLRM 828 (833)
Q Consensus 792 ~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp-----s~~evl~~ 828 (833)
.++....++..++...+.+||.+|. .+.||.+|
T Consensus 387 ----FPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h 424 (516)
T KOG0690|consen 387 ----FPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRH 424 (516)
T ss_pred ----CCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhh
Confidence 1123345677888899999999994 35555543
No 279
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=4.5e-37 Score=329.89 Aligned_cols=249 Identities=22% Similarity=0.291 Sum_probs=198.1
Q ss_pred HhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
+.|+..+.||+|+||.||+|... +|+.||+|++..... ......+++.+|++++++++||||++++++|..++..|+|
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGK-QSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEecccc-CcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 44777889999999999999974 789999999842221 1122345789999999999999999999999999999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
|||++ |++.+++... ...+++..+..++.|++.||.||| ..+|+||||+|+||++++++.+|++|||++......
T Consensus 94 ~e~~~-g~l~~~~~~~-~~~l~~~~~~~~~~ql~~~L~~LH---~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~ 168 (307)
T cd06607 94 MEYCL-GSASDILEVH-KKPLQEVEIAAICHGALQGLAYLH---SHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA 168 (307)
T ss_pred HHhhC-CCHHHHHHHc-ccCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEECCCCCEEEeecCcceecCCC
Confidence 99997 5787777543 345899999999999999999999 788999999999999999999999999998765322
Q ss_pred CCCCcccccccccccccccccc---CCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccc
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAY---TMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNV 790 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (833)
....|++.|+|||++. ...++.++|||||||++|||+||+.||........... .... +. +..
T Consensus 169 ------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~-~~~~-~~------~~~ 234 (307)
T cd06607 169 ------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH-IAQN-DS------PTL 234 (307)
T ss_pred ------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHH-HhcC-CC------CCC
Confidence 2456889999999874 35688999999999999999999999975443221111 1100 00 000
Q ss_pred cCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 791 SRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 791 ~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.......++.+++.+||+.||++||++.+|+.+
T Consensus 235 -----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 235 -----SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred -----CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 011234578899999999999999999999875
No 280
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=5.3e-37 Score=331.18 Aligned_cols=194 Identities=22% Similarity=0.336 Sum_probs=159.9
Q ss_pred cccccCcccEEEEEEcC---CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEec--CCceEEEEe
Q 003296 561 NVELKTRFSTYYKAVMP---SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLA--SDSAYLFYE 635 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~--~~~~~lv~e 635 (833)
..||+|+||.||+|+.. ++..||+|++... .....+.+|++++++++|||||++++++.. +...++|||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGT------GISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFD 80 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCC------CCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEe
Confidence 57999999999999964 4578999998421 123468899999999999999999999864 457899999
Q ss_pred eCCCCChhhhhhcC-------CCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceee----CCCCCceeccc
Q 003296 636 YAPKGTLFDVLHGC-------LENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFL----KSLKEPQIGDI 704 (833)
Q Consensus 636 y~~~g~L~~~l~~~-------~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill----~~~~~~ki~df 704 (833)
|+++ +|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+||++ ++++.+||+||
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07867 81 YAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred eeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEccCCCCCCcEEEeec
Confidence 9975 888877521 1225889999999999999999999 7889999999999999 56678999999
Q ss_pred eeeeeeCCCCCC-CccccccccccccccccccC-CcccccCcchhhHHHHHHHHhCCCcccC
Q 003296 705 ELCKVIDPSKST-GSLSTVAGSVGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKTAVNQ 764 (833)
Q Consensus 705 gl~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~~p~~~ 764 (833)
|+++........ .......||+.|+|||++.+ ..++.++|||||||++|||+||++||..
T Consensus 157 G~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 157 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred cceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 999876433211 12234678999999999876 4589999999999999999999999973
No 281
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=3.6e-37 Score=326.57 Aligned_cols=254 Identities=17% Similarity=0.281 Sum_probs=200.2
Q ss_pred HHHHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEec---
Q 003296 552 AMEAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVLA--- 626 (833)
Q Consensus 552 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~--- 626 (833)
.....|+..+.+|+|+||.||+|.. .+++.||+|.+.... ....++..|+.+++++ +||||+++++++..
T Consensus 13 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~ 87 (282)
T cd06636 13 DPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-----DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSP 87 (282)
T ss_pred ChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-----HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccc
Confidence 3456788889999999999999997 578999999984221 1235788999999999 69999999999863
Q ss_pred ---CCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceecc
Q 003296 627 ---SDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGD 703 (833)
Q Consensus 627 ---~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~d 703 (833)
.+..|+||||+++|+|.+++.......+++..+..++.|+++|++||| +.+|+|||+||+||++++++.++++|
T Consensus 88 ~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dl~~~nili~~~~~~~l~d 164 (282)
T cd06636 88 PGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLH---AHKVIHRDIKGQNVLLTENAEVKLVD 164 (282)
T ss_pred cCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEee
Confidence 457899999999999999997654556889999999999999999999 78899999999999999999999999
Q ss_pred ceeeeeeCCCCCCCcccccccccccccccccc-----CCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcc
Q 003296 704 IELCKVIDPSKSTGSLSTVAGSVGYIPPEYAY-----TMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQ 778 (833)
Q Consensus 704 fgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 778 (833)
||++........ ......|++.|+|||++. ...++.++|||||||++|||++|+.||............ ..
T Consensus 165 fg~~~~~~~~~~--~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~--~~ 240 (282)
T cd06636 165 FGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLI--PR 240 (282)
T ss_pred Ccchhhhhcccc--CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhH--hh
Confidence 999876532211 123467999999999875 345888999999999999999999999754322211110 00
Q ss_pred cccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 779 QDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
. ..+.. .....+.++.+++.+||+.||.+||++.|++++
T Consensus 241 -~-----~~~~~-----~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 241 -N-----PPPKL-----KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred -C-----CCCCC-----cccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 0 00000 011234578899999999999999999999864
No 282
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-38 Score=304.89 Aligned_cols=254 Identities=16% Similarity=0.155 Sum_probs=207.0
Q ss_pred HHHhcCC-ccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEec---
Q 003296 553 MEAVANP-LNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVLA--- 626 (833)
Q Consensus 553 ~~~~~~~-~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~--- 626 (833)
.+++|.. ..+||-|-.|.|-.|.. .+|+.+|.|++. +....++|+++.-+. .|||||.++++|..
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~---------Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~~ 129 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLL---------DSPKARREVELHWMASGHPHIVSIIDVYENSYQ 129 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHh---------cCHHHHhHhhhhhhhcCCCceEEeehhhhhhcc
Confidence 4555654 37899999999999996 589999999993 224567899887666 49999999999874
Q ss_pred -CCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCC---CCCceec
Q 003296 627 -SDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKS---LKEPQIG 702 (833)
Q Consensus 627 -~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~---~~~~ki~ 702 (833)
...+.+|||.|+||.|++.+.+++..++++.++-.|+.||+.|+.||| +..|.||||||+|+|... +-..|++
T Consensus 130 ~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH---~~nIAHRDlKpENLLyt~t~~na~lKLt 206 (400)
T KOG0604|consen 130 GRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLH---SMNIAHRDLKPENLLYTTTSPNAPLKLT 206 (400)
T ss_pred CceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHH---hcchhhccCChhheeeecCCCCcceEec
Confidence 356789999999999999999887788999999999999999999999 889999999999999964 3467999
Q ss_pred cceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccc
Q 003296 703 DIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKL 782 (833)
Q Consensus 703 dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 782 (833)
|||+|+.... ...+.+.|-||+|.|||++...+|+..+|+||+||++|-|++|.+||....... -..+.-
T Consensus 207 DfGFAK~t~~---~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~a-------ispgMk 276 (400)
T KOG0604|consen 207 DFGFAKETQE---PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-------ISPGMK 276 (400)
T ss_pred ccccccccCC---CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCcc-------CChhHH
Confidence 9999997543 224567788999999999999999999999999999999999999998432211 000111
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 783 DHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.++....+..+.+.+...++.+.++|...|..+|.+|.|+.|++.+
T Consensus 277 ~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 277 RRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred hHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 2222223334455677888899999999999999999999999864
No 283
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=7.1e-37 Score=321.91 Aligned_cols=258 Identities=20% Similarity=0.251 Sum_probs=202.7
Q ss_pred hcCCccccccCcccEEEEEEcCC--CceEEEEEccccchh------hhccChhHHHHHHHHHhc-CCCCCcccceEEEec
Q 003296 556 VANPLNVELKTRFSTYYKAVMPS--GMSYFIKKLNWSDKI------FQLGSHHKFDKELEVLGK-LSNSNVMTPLAYVLA 626 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~~--~~~vavK~~~~~~~~------~~~~~~~~~~~E~~~l~~-l~H~niv~~~~~~~~ 626 (833)
+|+..+.||+|+||.||+|.... ++.+|||.+...... .......++.+|++++.+ ++||||++++++|..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 36677899999999999999754 788999988422111 112234567889998875 799999999999999
Q ss_pred CCceEEEEeeCCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccc
Q 003296 627 SDSAYLFYEYAPKGTLFDVLHGC--LENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDI 704 (833)
Q Consensus 627 ~~~~~lv~ey~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~df 704 (833)
.+..++||||+++++|.+++... ....+++..++.++.|++.||.|||+ ..+++||||||+||++++++.+|++||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~--~~~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK--EKRIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc--CCceeecCCCHHHEEECCCCcEEEecc
Confidence 99999999999999999988532 23468999999999999999999994 257999999999999999999999999
Q ss_pred eeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccc
Q 003296 705 ELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDH 784 (833)
Q Consensus 705 gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 784 (833)
|.+....... ......|+..|+|||++.+..++.++|||||||++|||++|+.||..... .......... ....
T Consensus 159 g~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~-~~~~~~~~~~--~~~~ 232 (269)
T cd08528 159 GLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM-LSLATKIVEA--VYEP 232 (269)
T ss_pred cceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH-HHHHHHHhhc--cCCc
Confidence 9998764332 22456789999999999988899999999999999999999999974432 2211111111 0000
Q ss_pred cccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 003296 785 ILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831 (833)
Q Consensus 785 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~ 831 (833)
. . ......++.+++.+||+.||++||++.||..++++
T Consensus 233 ~--------~--~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~ 269 (269)
T cd08528 233 L--------P--EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD 269 (269)
T ss_pred C--------C--cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence 0 0 01123567899999999999999999999999863
No 284
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=3.2e-37 Score=330.69 Aligned_cols=257 Identities=16% Similarity=0.149 Sum_probs=199.8
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
+|+..+.+|+|+||.||+|... +++.||+|.+... ........+.+.+|++++++++||||+++++++..++..++||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~-~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQ-NLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehh-hhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 5777899999999999999974 6899999998432 2112233467889999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
||+++|+|.+++.. ...+++..+..++.|+++|++||| +.+++||||||+||+++.++.+|++|||+++......
T Consensus 81 e~~~g~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~ 155 (305)
T cd05609 81 EYVEGGDCATLLKN--IGALPVDMARMYFAETVLALEYLH---NYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSL 155 (305)
T ss_pred ecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHEEECCCCCEEEeeCCCccccCcCc
Confidence 99999999999976 346899999999999999999999 7899999999999999999999999999987421110
Q ss_pred C-------------CCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccc
Q 003296 715 S-------------TGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDK 781 (833)
Q Consensus 715 ~-------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 781 (833)
. ........|+..|+|||++.+..++.++|||||||++|||++|+.||.+... .++....... .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~-~~~~~~~~~~-~- 232 (305)
T cd05609 156 TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP-EELFGQVISD-D- 232 (305)
T ss_pred cccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhc-c-
Confidence 0 0011234688899999999888899999999999999999999999975332 2222211111 0
Q ss_pred ccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 003296 782 LDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLL 830 (833)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~ 830 (833)
...+.. ....+.++.+++.+||+.||++||++.++.+.|+
T Consensus 233 ---~~~~~~------~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~ 272 (305)
T cd05609 233 ---IEWPEG------DEALPADAQDLISRLLRQNPLERLGTGGAFEVKQ 272 (305)
T ss_pred ---cCCCCc------cccCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence 000000 0123446789999999999999999655555443
No 285
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=4.3e-37 Score=321.40 Aligned_cols=251 Identities=19% Similarity=0.280 Sum_probs=201.3
Q ss_pred cCCccccccCcccEEEEEEcC-CCceEEEEEccccchh-hhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 557 ANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKI-FQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
|...+.||+|+||.||+|+.. ++..||+|.+...... ......+.+.+|++++++++||||+++++++...+..++||
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL 81 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence 556789999999999999986 8999999998432211 11123467999999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
||+++++|.+++.. ...+++..+..++.|+++|++||| +.+|+|+||||+||+++.++.+||+|||++.......
T Consensus 82 e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~ 156 (258)
T cd06632 82 ELVPGGSLAKLLKK--YGSFPEPVIRLYTRQILLGLEYLH---DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS 156 (258)
T ss_pred EecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccceeccccc
Confidence 99999999999975 345889999999999999999999 7899999999999999999999999999988764332
Q ss_pred CCCccccccccccccccccccCCc-ccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCC
Q 003296 715 STGSLSTVAGSVGYIPPEYAYTMR-VTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRT 793 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (833)
......|+..|+|||.+.... ++.++|+|||||++|||++|+.||........... .... ..... +.
T Consensus 157 ---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~-~~~~-~~~~~-----~~-- 224 (258)
T cd06632 157 ---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFK-IGRS-KELPP-----IP-- 224 (258)
T ss_pred ---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHH-HHhc-ccCCC-----cC--
Confidence 123467899999999987666 89999999999999999999999975543222111 1110 00000 00
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 794 SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 794 ~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
......+.+++.+||+.+|++||++.|++++
T Consensus 225 ----~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 225 ----DHLSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred ----CCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 1223567789999999999999999999864
No 286
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=6.2e-37 Score=327.56 Aligned_cols=265 Identities=19% Similarity=0.217 Sum_probs=201.2
Q ss_pred cCCccccccCcccEEEEEEcC-CCceEEEEEccccchhh-hccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 557 ANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIF-QLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
|+..+.||+|+||.||+|... +|+.||||++....... .......+..|++++++++||||+++++++.+++..++||
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF 81 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence 566788999999999999974 78999999995322110 1223456788999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
||+ +|+|.+++.... ..++|..+..++.|+++||+||| ..+|+||||||+||+++.++.+||+|||+++......
T Consensus 82 e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~ 156 (298)
T cd07841 82 EFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLH---SNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN 156 (298)
T ss_pred ccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC
Confidence 999 899999997632 36899999999999999999999 7889999999999999999999999999998764332
Q ss_pred CCCccccccccccccccccccC-CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccc----------ccc
Q 003296 715 STGSLSTVAGSVGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQD----------KLD 783 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~----------~~~ 783 (833)
. ......+++.|+|||++.+ ..++.++|||||||++|||++|.+||.+................ ...
T Consensus 157 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (298)
T cd07841 157 R--KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLP 234 (298)
T ss_pred c--cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccc
Confidence 1 1233467889999998864 45789999999999999999998888755443322111100000 000
Q ss_pred ccccccccCCc---hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 784 HILDFNVSRTS---LAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 784 ~~~~~~~~~~~---~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
........... ........++.+++.+||+.||++|||++||+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 235 DYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred ccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 00000000000 0011234678899999999999999999999986
No 287
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=4.5e-37 Score=327.34 Aligned_cols=255 Identities=19% Similarity=0.239 Sum_probs=199.7
Q ss_pred HHHHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEecC--
Q 003296 552 AMEAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVLAS-- 627 (833)
Q Consensus 552 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~-- 627 (833)
.++++|...+.||+|+||.||+|.. .+|+.+|+|++.... .....+.+|+.+++++ +|||+++++++|...
T Consensus 19 ~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-----~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~ 93 (291)
T cd06639 19 DPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-----DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADK 93 (291)
T ss_pred CCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-----cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccc
Confidence 3467788899999999999999997 578999999984221 1235688999999999 799999999999754
Q ss_pred ---CceEEEEeeCCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceec
Q 003296 628 ---DSAYLFYEYAPKGTLFDVLHGC--LENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIG 702 (833)
Q Consensus 628 ---~~~~lv~ey~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~ 702 (833)
+..++||||+++|+|.++++.. ....++|..+..++.|++.||+||| ..+|+||||||+||++++++.+|++
T Consensus 94 ~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~nili~~~~~~kl~ 170 (291)
T cd06639 94 LVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLH---NNRIIHRDVKGNNILLTTEGGVKLV 170 (291)
T ss_pred cCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEe
Confidence 3589999999999999988642 2346899999999999999999999 7899999999999999999999999
Q ss_pred cceeeeeeCCCCCCCccccccccccccccccccCC-----cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhc
Q 003296 703 DIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTM-----RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSA 777 (833)
Q Consensus 703 dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 777 (833)
|||+++....... ......|+..|+|||++... .++.++|||||||++|||++|+.||............ ..
T Consensus 171 dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~-~~ 247 (291)
T cd06639 171 DFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKI-PR 247 (291)
T ss_pred ecccchhcccccc--cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHH-hc
Confidence 9999886543221 11345789999999987543 3689999999999999999999999754332221111 00
Q ss_pred ccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 778 QQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.....+.+ .......+.+++.+||+.+|++||++.|++++
T Consensus 248 --~~~~~~~~---------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 248 --NPPPTLLH---------PEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred --CCCCCCCc---------ccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 00011111 11233468899999999999999999999875
No 288
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=3.2e-37 Score=327.11 Aligned_cols=264 Identities=18% Similarity=0.219 Sum_probs=200.0
Q ss_pred cCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEe
Q 003296 557 ANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYE 635 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 635 (833)
|+..+.||.|++|.||+|... +|..||||++.... ......+.+.+|++++++++|||++++++++..++..|+|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e 78 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLET--EDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFE 78 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeeccc--ccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEe
Confidence 456788999999999999974 79999999984221 122334678899999999999999999999999999999999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCC
Q 003296 636 YAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715 (833)
Q Consensus 636 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~ 715 (833)
|++ ++|.+++.......++|..+..++.|+++||+||| +.+++||||+|+||+++.++.+|++|||+++.......
T Consensus 79 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH---~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~ 154 (283)
T cd07835 79 FLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCH---SHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR 154 (283)
T ss_pred ccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc
Confidence 995 69999998654446899999999999999999999 78999999999999999999999999999976532221
Q ss_pred CCccccccccccccccccccCC-cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccc-------cccc
Q 003296 716 TGSLSTVAGSVGYIPPEYAYTM-RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLD-------HILD 787 (833)
Q Consensus 716 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 787 (833)
......++..|+|||++.+. .++.++|||||||++|||++|+.||.......+............. ...+
T Consensus 155 --~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd07835 155 --TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPD 232 (283)
T ss_pred --ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchh
Confidence 11234578999999987654 5789999999999999999999999765443322111100000000 0000
Q ss_pred -------ccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 788 -------FNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 788 -------~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
...............++.+++.+|++.||++|||++||+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 233 YKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred hhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00000000011223578899999999999999999999864
No 289
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=6.1e-37 Score=326.07 Aligned_cols=247 Identities=20% Similarity=0.236 Sum_probs=201.4
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
+|...+.||+|+||.||+|... +++.||+|++. ..........+.+.+|++++++++||||+++++++...+..++||
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~-~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILS-KAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEE-HHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 4677889999999999999974 78999999984 222222234567899999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
||+++|+|.+++.. ...+++..+..++.|++.||.||| ..+|+||||||+||+++.++.+|++|||+++.....
T Consensus 81 e~~~~~~L~~~~~~--~~~l~~~~~~~~~~qil~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~- 154 (290)
T cd05580 81 EYVPGGELFSHLRK--SGRFPEPVARFYAAQVVLALEYLH---SLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR- 154 (290)
T ss_pred ecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC-
Confidence 99999999999976 356899999999999999999999 789999999999999999999999999999876433
Q ss_pred CCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCc
Q 003296 715 STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTS 794 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (833)
.....|++.|+|||.+.+..++.++|||||||++|||++|+.||........+.. .. . .. ..++.
T Consensus 155 ----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-~~-~-~~------~~~~~-- 219 (290)
T cd05580 155 ----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEK-IL-E-GK------VRFPS-- 219 (290)
T ss_pred ----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-Hh-c-CC------ccCCc--
Confidence 1345789999999999888889999999999999999999999975442211111 11 1 00 00111
Q ss_pred hhHHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 003296 795 LAVRSQMLTVLKVAVACVSVSPEARP-----KMKSVLRM 828 (833)
Q Consensus 795 ~~~~~~~~~~~~l~~~cl~~dP~~Rp-----s~~evl~~ 828 (833)
.....+.+++.+||+.||.+|| +++|++++
T Consensus 220 ----~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~ 254 (290)
T cd05580 220 ----FFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH 254 (290)
T ss_pred ----cCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcC
Confidence 1234677899999999999999 77787654
No 290
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=5.5e-37 Score=325.89 Aligned_cols=264 Identities=19% Similarity=0.212 Sum_probs=202.7
Q ss_pred cCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEe
Q 003296 557 ANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYE 635 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 635 (833)
|+..+.||+|+||.||+|.. .+|..||||++.... ......+.+.+|++++++++||||+++++++..++..++|||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e 79 (286)
T cd07832 2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRR--LEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVME 79 (286)
T ss_pred ceEEeecccCCCcEEEEEEECCCCceEEEEEEEccc--ccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEec
Confidence 66778999999999999997 478999999984322 112335689999999999999999999999999999999999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCC
Q 003296 636 YAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715 (833)
Q Consensus 636 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~ 715 (833)
|+ +++|.+++.... ..+++.++..++.|+++||+||| +.+|+|+||||+||+++.++.++++|||++........
T Consensus 80 ~~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~ 154 (286)
T cd07832 80 YM-PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMH---ANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP 154 (286)
T ss_pred cc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC
Confidence 99 999999987542 56899999999999999999999 78899999999999999999999999999987643321
Q ss_pred CCccccccccccccccccccCC-cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhh--cccc-----------c
Q 003296 716 TGSLSTVAGSVGYIPPEYAYTM-RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNS--AQQD-----------K 781 (833)
Q Consensus 716 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~--~~~~-----------~ 781 (833)
.......|+..|+|||++.+. .++.++||||+||++|||+||++||.+......+..... .... .
T Consensus 155 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07832 155 -RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPD 233 (286)
T ss_pred -CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcch
Confidence 112345789999999988654 468999999999999999999888875544333221111 0000 0
Q ss_pred ccccccccccCC--chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 782 LDHILDFNVSRT--SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 782 ~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
...+..+..... ..........+.+++.+|++.||++|||++|+++|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 234 YNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred hhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000000000000 00001234678899999999999999999999875
No 291
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=5.4e-37 Score=326.72 Aligned_cols=250 Identities=22% Similarity=0.302 Sum_probs=202.4
Q ss_pred HhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
..|+..+.+|+|+||.||+|.. .++..||+|.+... .....+.+.+|+.++++++||||++++++|...+..|+|
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~----~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv 94 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQ----QQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVV 94 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccc----cchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEE
Confidence 5677889999999999999986 47899999998422 122346789999999999999999999999999999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
+||+++|+|.+++.+ ..+++.++..++.|++.|+.||| +.+++||||||+||+++.++.+||+|||++......
T Consensus 95 ~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH---~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~ 168 (293)
T cd06647 95 MEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 168 (293)
T ss_pred EecCCCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHH---hCCEeeccCCHHHEEEcCCCCEEEccCcceeccccc
Confidence 999999999999874 35789999999999999999999 789999999999999999999999999998765433
Q ss_pred CCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCC
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRT 793 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (833)
.. ......|++.|+|||++....++.++|||||||++||+++|+.||............ ... . . ..
T Consensus 169 ~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~-~~~-~--------~--~~ 234 (293)
T cd06647 169 QS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI-ATN-G--------T--PE 234 (293)
T ss_pred cc--ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeeh-hcC-C--------C--CC
Confidence 22 123356899999999988888999999999999999999999999754332211000 000 0 0 00
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 794 SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 794 ~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
..........+.+++.+||+.+|++||++.|++.|
T Consensus 235 ~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 235 LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00111234567889999999999999999999876
No 292
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=4.7e-37 Score=320.95 Aligned_cols=251 Identities=23% Similarity=0.319 Sum_probs=202.0
Q ss_pred cCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEe
Q 003296 557 ANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYE 635 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 635 (833)
|...+.+|+|+||.||+|... +|..||+|.+... . ......+.+.+|++++++++||||+++++++...+..++|||
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~-~-~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 79 (257)
T cd08225 2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLT-K-MPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVME 79 (257)
T ss_pred ceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHh-h-ccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEe
Confidence 667789999999999999975 6899999998422 1 122345678899999999999999999999999999999999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCC-CceeccceeeeeeCCCC
Q 003296 636 YAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLK-EPQIGDIELCKVIDPSK 714 (833)
Q Consensus 636 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~-~~ki~dfgl~~~~~~~~ 714 (833)
|+++++|.+++.......++|..+..++.|+++||+||| ..+++|+||||+||++++++ .+|++|||.+.......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (257)
T cd08225 80 YCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIH---DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM 156 (257)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEcCCCCeEEecccccchhccCCc
Confidence 999999999998654456899999999999999999999 77899999999999999875 46999999987664322
Q ss_pred CCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCc
Q 003296 715 STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTS 794 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (833)
. ......|++.|+|||+..+..++.++|||||||++|||++|+.||.... ..+++...... ..... .
T Consensus 157 ~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-~~~~~~~~~~~--~~~~~-----~--- 223 (257)
T cd08225 157 E--LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN-LHQLVLKICQG--YFAPI-----S--- 223 (257)
T ss_pred c--cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-HHHHHHHHhcc--cCCCC-----C---
Confidence 1 1233568999999999988889999999999999999999999996433 23333222111 11110 0
Q ss_pred hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 795 LAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 795 ~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.....++.+++.+|++.+|++|||+.|++++
T Consensus 224 ---~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 224 ---PNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred ---CCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 1123467899999999999999999999875
No 293
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=9.7e-37 Score=322.25 Aligned_cols=249 Identities=18% Similarity=0.291 Sum_probs=201.4
Q ss_pred HhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
+-|+..+.||+|+||.||+|.. .++..||||...... .....+.|.+|++++++++||||+++++++..++..++|
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 80 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE---AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWII 80 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEecccc---chHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEE
Confidence 4567788999999999999986 478999999874221 112346789999999999999999999999999999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
|||+++|+|.+++.. ..+++..+..++.|++.|+.||| ..+++|+||||+||+++.++.++++|||+++.....
T Consensus 81 ~e~~~~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06641 81 MEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 154 (277)
T ss_pred EEeCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHc---cCCeecCCCCHHhEEECCCCCEEEeecccceecccc
Confidence 999999999999874 35899999999999999999999 789999999999999999999999999998866432
Q ss_pred CCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCC
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRT 793 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (833)
.. ......|+..|+|||+..+..++.++|||||||++|||++|+.||...... .+....... . . . .+
T Consensus 155 ~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~-~-~-~----~~--- 221 (277)
T cd06641 155 QI--KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM-KVLFLIPKN-N-P-P----TL--- 221 (277)
T ss_pred hh--hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH-HHHHHHhcC-C-C-C----CC---
Confidence 21 113356899999999998888899999999999999999999999743321 111111100 0 0 0 00
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 794 SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 794 ~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
......++.+++.+||+.+|++||++.|++++
T Consensus 222 ---~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 222 ---EGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred ---CcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 01234567899999999999999999999985
No 294
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-38 Score=302.65 Aligned_cols=249 Identities=16% Similarity=0.242 Sum_probs=197.4
Q ss_pred CccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCC-CCCcccceEEEecCCceEEEEee
Q 003296 559 PLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLS-NSNVMTPLAYVLASDSAYLFYEY 636 (833)
Q Consensus 559 ~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~~~~lv~ey 636 (833)
....+|.|+.|.|++++. .+|..+|||.+.+... ....++....++++.+-+ .|.||+.+|||..+..+++.||.
T Consensus 96 ~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~N---kee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMel 172 (391)
T KOG0983|consen 96 NLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGN---KEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMEL 172 (391)
T ss_pred hHHhhcCCCccceEEEEEcccceEEEEEeecccCC---HHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHH
Confidence 456899999999999996 4799999999953332 234577888888887775 89999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCC
Q 003296 637 APKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKST 716 (833)
Q Consensus 637 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~ 716 (833)
|.. -...+++. -..++++...-++...+++||.||.+ .++|||||+||+|||+|+.|.+|++|||++..+.+....
T Consensus 173 Ms~-C~ekLlkr-ik~piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAh 248 (391)
T KOG0983|consen 173 MST-CAEKLLKR-IKGPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAH 248 (391)
T ss_pred HHH-HHHHHHHH-hcCCchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceeeccccc
Confidence 853 45555543 34568888888899999999999986 678999999999999999999999999999887654422
Q ss_pred Ccccccccccccccccccc---CCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCC
Q 003296 717 GSLSTVAGSVGYIPPEYAY---TMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRT 793 (833)
Q Consensus 717 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (833)
+..+|.+.|||||.+. ..+|+-++|||||||.++|+.||+.||.+.+...+.......+ +. ..++..
T Consensus 249 ---trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~-eP--P~L~~~---- 318 (391)
T KOG0983|consen 249 ---TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNE-EP--PLLPGH---- 318 (391)
T ss_pred ---ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhc-CC--CCCCcc----
Confidence 4568999999999886 3469999999999999999999999998654433333222221 11 111111
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 794 SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 794 ~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
...+..+.+++..||.+|+.+||.-.++++|
T Consensus 319 ----~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 319 ----MGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred ----cCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 1245678899999999999999999998875
No 295
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=3.2e-37 Score=325.94 Aligned_cols=244 Identities=17% Similarity=0.180 Sum_probs=188.1
Q ss_pred ccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHh---cCCCCCcccceEEEecCCceEEEEeeC
Q 003296 562 VELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLG---KLSNSNVMTPLAYVLASDSAYLFYEYA 637 (833)
Q Consensus 562 ~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~---~l~H~niv~~~~~~~~~~~~~lv~ey~ 637 (833)
+||+|+||.||++.. .+|+.||||.+... ........+.+.+|..+++ ..+||||+.+++++..++..++||||+
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 79 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKK-RIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLM 79 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEcc-ccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecC
Confidence 489999999999997 47899999998422 1111122234555554444 347999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCC
Q 003296 638 PKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG 717 (833)
Q Consensus 638 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~ 717 (833)
++|+|.+++.. ...++|..+..++.|++.||+||| +.+|+||||||+||++++++.+|++|||++.......
T Consensus 80 ~~~~L~~~i~~--~~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~--- 151 (279)
T cd05633 80 NGGDLHYHLSQ--HGVFSEKEMRFYATEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--- 151 (279)
T ss_pred CCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC---
Confidence 99999999875 346999999999999999999999 7889999999999999999999999999987553222
Q ss_pred cccccccccccccccccc-CCcccccCcchhhHHHHHHHHhCCCcccCCcc-HHHHHHHhhcccccccccccccccCCch
Q 003296 718 SLSTVAGSVGYIPPEYAY-TMRVTMAGNVYSFGVILLELLTGKTAVNQGNE-LAKWVLRNSAQQDKLDHILDFNVSRTSL 795 (833)
Q Consensus 718 ~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (833)
.....||..|+|||+.. +..++.++|||||||++|||++|+.||..... ........... ....+
T Consensus 152 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~-------~~~~~----- 218 (279)
T cd05633 152 -PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT-------VNVEL----- 218 (279)
T ss_pred -ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhc-------CCcCC-----
Confidence 12357999999999886 45689999999999999999999999974321 11111111000 01111
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 003296 796 AVRSQMLTVLKVAVACVSVSPEARP-----KMKSVLRM 828 (833)
Q Consensus 796 ~~~~~~~~~~~l~~~cl~~dP~~Rp-----s~~evl~~ 828 (833)
......++.+++.+|+..||++|| +++|+++|
T Consensus 219 -~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 219 -PDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred -ccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 112345778999999999999999 69999876
No 296
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=3.4e-37 Score=323.60 Aligned_cols=250 Identities=19% Similarity=0.240 Sum_probs=202.4
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
+|+..+.||+|+||.||+|... +++.||+|++..... ....+++.+|++++++++||||+++++++..++..++|+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN---EAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICM 78 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC---hHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEE
Confidence 4667789999999999999975 789999999843211 134567999999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCC-CCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTS-NPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~-~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
||+++++|.+++.... ..+++.....++.|+++|++|+| + .+++||||||+||++++++.+|++|||.+......
T Consensus 79 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH---~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~ 154 (265)
T cd06605 79 EYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLH---EKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS 154 (265)
T ss_pred EecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHc---CCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHH
Confidence 9999999999998642 56889999999999999999999 6 89999999999999999999999999998765322
Q ss_pred CCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCc----cHHHHHHHhhccccccccccccc
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGN----ELAKWVLRNSAQQDKLDHILDFN 789 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 789 (833)
.. ....|+..|+|||++.+..++.++|||||||++|||++|+.||.... .....+...... .. +.
T Consensus 155 ~~----~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~------~~ 223 (265)
T cd06605 155 LA----KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNE-PP------PR 223 (265)
T ss_pred Hh----hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcC-CC------CC
Confidence 11 12678999999999988899999999999999999999999997542 222222111111 00 00
Q ss_pred ccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 790 VSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 790 ~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
. . ......++.+++.+||..||++|||+.|++.+
T Consensus 224 ~---~--~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 224 L---P--SGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred C---C--hhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 0 0 01145568899999999999999999999864
No 297
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=5.1e-37 Score=326.50 Aligned_cols=265 Identities=18% Similarity=0.219 Sum_probs=202.4
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
.|+..+.||+|+||.||+|... +++.||||+++... ......+.+.+|++++++++||||+++++++..++..++||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 79 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESE--DDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVF 79 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhc--ccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEE
Confidence 4777889999999999999975 68999999984221 12234578999999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
||++++.+..+... ...+++.++..++.|++.|++||| ..+++|||+||+||++++++.+|++|||++.......
T Consensus 80 e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~ 154 (288)
T cd07833 80 EYVERTLLELLEAS--PGGLPPDAVRSYIWQLLQAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFARALRARP 154 (288)
T ss_pred ecCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCc
Confidence 99998777766554 345899999999999999999999 7889999999999999999999999999998765433
Q ss_pred CCCccccccccccccccccccCC-cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhh--cc-----------cc
Q 003296 715 STGSLSTVAGSVGYIPPEYAYTM-RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNS--AQ-----------QD 780 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~--~~-----------~~ 780 (833)
. .......|+..|+|||++.+. .++.++|||||||++|||++|+.||.+............ .. ..
T Consensus 155 ~-~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07833 155 A-SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNP 233 (288)
T ss_pred c-ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCc
Confidence 2 122346789999999999887 789999999999999999999999975443322111000 00 00
Q ss_pred ccc--ccccccccCC--chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 781 KLD--HILDFNVSRT--SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 781 ~~~--~~~~~~~~~~--~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
... ...+...... .......+.++.+++.+||+.+|++|||+++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 234 RFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred cccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 000 0000000000 00001125678999999999999999999999864
No 298
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=9.9e-37 Score=321.83 Aligned_cols=255 Identities=19% Similarity=0.267 Sum_probs=201.8
Q ss_pred HHHHhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEecCC-
Q 003296 552 AMEAVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVLASD- 628 (833)
Q Consensus 552 ~~~~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~- 628 (833)
..++.|+..+.+|+|+||.||+|... +++.||+|++.... ...+.|.+|+++++++ +||||++++++|....
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~ 77 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE-----DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNP 77 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc-----hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCC
Confidence 34678889999999999999999974 68899999984221 1346799999999999 6999999999997654
Q ss_pred -----ceEEEEeeCCCCChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCcee
Q 003296 629 -----SAYLFYEYAPKGTLFDVLHGCL--ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQI 701 (833)
Q Consensus 629 -----~~~lv~ey~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki 701 (833)
..++||||+++++|.+++.... ...+++..+..++.|++.||.||| +.+++|+||+|+||++++++.+|+
T Consensus 78 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~~l~p~ni~~~~~~~~~l 154 (275)
T cd06608 78 PGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLH---ENKVIHRDIKGQNILLTKNAEVKL 154 (275)
T ss_pred CCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEEccCCeEEE
Confidence 4899999999999999987533 356899999999999999999999 789999999999999999999999
Q ss_pred ccceeeeeeCCCCCCCccccccccccccccccccC-----CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhh
Q 003296 702 GDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYT-----MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNS 776 (833)
Q Consensus 702 ~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 776 (833)
+|||++........ ......|+..|+|||++.. ..++.++|||||||++|||++|+.||............ .
T Consensus 155 ~d~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~-~ 231 (275)
T cd06608 155 VDFGVSAQLDSTLG--RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKI-P 231 (275)
T ss_pred CCCccceecccchh--hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHh-h
Confidence 99999876543221 2234578999999998753 34788999999999999999999999754332221111 0
Q ss_pred cccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 777 AQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
. ... +... .......++.+++.+||+.||++|||+.|++++
T Consensus 232 ~--~~~-----~~~~----~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 232 R--NPP-----PTLK----SPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred c--cCC-----CCCC----chhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 0 000 0111 111244578899999999999999999999874
No 299
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=8e-37 Score=320.59 Aligned_cols=255 Identities=20% Similarity=0.320 Sum_probs=202.9
Q ss_pred hcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEec--CCceEE
Q 003296 556 VANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLA--SDSAYL 632 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~--~~~~~l 632 (833)
+|+..+.+|.|+||.||+|.. .+|+.||+|.+..... .....+.+.+|++++++++||||+++++++.. +...++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~ 78 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM--TEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYI 78 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC--CHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEE
Confidence 366778999999999999986 4789999999842211 12234678899999999999999999998864 345899
Q ss_pred EEeeCCCCChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHhhhcCC--CCCeeecCCCccceeeCCCCCceeccceeee
Q 003296 633 FYEYAPKGTLFDVLHGCL--ENALDWASRYSIAVGVAQGLAFLHGFT--SNPILLLDLSTRNIFLKSLKEPQIGDIELCK 708 (833)
Q Consensus 633 v~ey~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~ylH~~~--~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~ 708 (833)
||||+++|+|.+++.... ...+++..++.++.|++.||+|||..+ ..+++||||||+||+++.++.+|++|||++.
T Consensus 79 ~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~ 158 (265)
T cd08217 79 VMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAK 158 (265)
T ss_pred EehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccc
Confidence 999999999999997532 346899999999999999999999554 6789999999999999999999999999998
Q ss_pred eeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccc
Q 003296 709 VIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDF 788 (833)
Q Consensus 709 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (833)
....... ......|++.|+|||++.+..++.++|||||||++|||++|+.||.... ........ .. ....
T Consensus 159 ~~~~~~~--~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-~~~~~~~~-~~-~~~~----- 228 (265)
T cd08217 159 ILGHDSS--FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN-QLQLASKI-KE-GKFR----- 228 (265)
T ss_pred cccCCcc--cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC-HHHHHHHH-hc-CCCC-----
Confidence 7654332 1234578999999999988889999999999999999999999997543 22222111 11 0000
Q ss_pred cccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 789 NVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.+ ....+.++.+++.+|++.+|++||++.||+++
T Consensus 229 ~~------~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 229 RI------PYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred CC------ccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 01 11234578899999999999999999999875
No 300
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=5.9e-37 Score=325.15 Aligned_cols=251 Identities=14% Similarity=0.192 Sum_probs=193.6
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHH-HhcCCCCCcccceEEEecCCceEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEV-LGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~-l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
+|+..+.||+|+||.||+|+.. +|+.||+|+++.... ......+..|+.+ ++..+|||||++++++..++..|+|
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv 78 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVN---SQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWIC 78 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCC---cHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEE
Confidence 5777889999999999999974 799999999842211 1123456677775 5667899999999999999999999
Q ss_pred EeeCCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHhhhcCCCC-CeeecCCCccceeeCCCCCceeccceeeeee
Q 003296 634 YEYAPKGTLFDVLHGC--LENALDWASRYSIAVGVAQGLAFLHGFTSN-PILLLDLSTRNIFLKSLKEPQIGDIELCKVI 710 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~-~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~ 710 (833)
|||++ |+|.+++... ....+++..+..++.|++.||+||| +. +++||||||+||+++.++.+||+|||+++..
T Consensus 79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~ 154 (283)
T cd06617 79 MEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLH---SKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYL 154 (283)
T ss_pred hhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeccccccc
Confidence 99997 6888887642 2346899999999999999999999 54 8999999999999999999999999998865
Q ss_pred CCCCCCCccccccccccccccccccC----CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccc
Q 003296 711 DPSKSTGSLSTVAGSVGYIPPEYAYT----MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHIL 786 (833)
Q Consensus 711 ~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (833)
.... ......|+..|+|||++.+ ..++.++|||||||++|||++|+.||.......+........ .
T Consensus 155 ~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~--~----- 224 (283)
T cd06617 155 VDSV---AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEE--P----- 224 (283)
T ss_pred cccc---ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhc--C-----
Confidence 3221 1133568999999998764 457899999999999999999999997432221111111100 0
Q ss_pred cccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 787 DFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.+... ....+.++.+++.+||+.+|++||++.|++++
T Consensus 225 ~~~~~-----~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 225 SPQLP-----AEKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred CCCCC-----ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00010 01234568899999999999999999999874
No 301
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-38 Score=338.02 Aligned_cols=253 Identities=22% Similarity=0.301 Sum_probs=203.4
Q ss_pred cCCccccccCcccEEEEEEc-CCC----ceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceE
Q 003296 557 ANPLNVELKTRFSTYYKAVM-PSG----MSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAY 631 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~-~~~----~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~ 631 (833)
.+...+||+|+||+||||.+ ++| .+||||++... ...+..++|..|+-+|++++|||+++++|+|.... ..
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~---t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~q 773 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEF---TSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQ 773 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeecc---CCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HH
Confidence 34567999999999999986 555 46899998422 22334678999999999999999999999998766 88
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeC
Q 003296 632 LFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711 (833)
Q Consensus 632 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~ 711 (833)
||++|||.|+|.|+++.. +..+.-...+.|..|||+|+.||| ..++|||||-.+|||+.+-..+||.|||+++...
T Consensus 774 lvtq~mP~G~LlDyvr~h-r~~igsq~lLnw~~QIAkgM~YLe---~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~ 849 (1177)
T KOG1025|consen 774 LVTQLMPLGCLLDYVREH-RDNIGSQDLLNWCYQIAKGMKYLE---EQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLA 849 (1177)
T ss_pred HHHHhcccchHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHH---hcchhhhhhhhhheeecCCCeEEEEecchhhccC
Confidence 999999999999999875 346888889999999999999999 8899999999999999999999999999999987
Q ss_pred CCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccccc
Q 003296 712 PSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFNV 790 (833)
Q Consensus 712 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (833)
..+..-......-.+.|||=|.+....|+.++|||||||++||++| |..|+++.. .+.+......++++
T Consensus 850 ~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~--~~eI~dlle~geRL-------- 919 (1177)
T KOG1025|consen 850 PDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIP--AEEIPDLLEKGERL-------- 919 (1177)
T ss_pred cccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCC--HHHhhHHHhccccC--------
Confidence 6554333333444678999999999999999999999999999998 899997432 11122222222221
Q ss_pred cCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 003296 791 SRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831 (833)
Q Consensus 791 ~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~ 831 (833)
+. +.....++..++.+||..|++.||++++......+
T Consensus 920 sq----PpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~ 956 (1177)
T KOG1025|consen 920 SQ----PPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSR 956 (1177)
T ss_pred CC----CCCccHHHHHHHHHHhccCcccCccHHHHHHHHHH
Confidence 11 12345577888999999999999999999877654
No 302
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=7e-37 Score=325.09 Aligned_cols=256 Identities=18% Similarity=0.191 Sum_probs=199.5
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecC--CceEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS--DSAYL 632 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~--~~~~l 632 (833)
+|+..+.||.|++|.||+|... +++.||+|.+..... .....++.+|++++++++|||||+++++|... +..++
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 78 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN---PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGI 78 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc---hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEE
Confidence 4677889999999999999984 789999999842211 12346799999999999999999999998754 46899
Q ss_pred EEeeCCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeee
Q 003296 633 FYEYAPKGTLFDVLHGC--LENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVI 710 (833)
Q Consensus 633 v~ey~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~ 710 (833)
||||+++|+|.+++... ....+++.....++.|++.||+||| ..+++|+||+|+||+++.++.++++|||++...
T Consensus 79 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~ 155 (287)
T cd06621 79 AMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGEL 155 (287)
T ss_pred EEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecCCeEEEeeccccccc
Confidence 99999999999987642 2346889999999999999999999 789999999999999999999999999998765
Q ss_pred CCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCc----cHHHHHHHhhcccccccccc
Q 003296 711 DPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGN----ELAKWVLRNSAQQDKLDHIL 786 (833)
Q Consensus 711 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~----~~~~~~~~~~~~~~~~~~~~ 786 (833)
..... ....++..|+|||...+..++.++||||+||++|||++|+.||.... ...+........ ..
T Consensus 156 ~~~~~----~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~----- 225 (287)
T cd06621 156 VNSLA----GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNM-PN----- 225 (287)
T ss_pred ccccc----ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcC-Cc-----
Confidence 32221 23567889999999988889999999999999999999999997542 111111111110 00
Q ss_pred cccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 787 DFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
+............+.++.+++.+||+.+|++|||+.||+++
T Consensus 226 -~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 226 -PELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred -hhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 00000000001234578899999999999999999999874
No 303
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.2e-36 Score=322.68 Aligned_cols=248 Identities=14% Similarity=0.243 Sum_probs=199.7
Q ss_pred cCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEe
Q 003296 557 ANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYE 635 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 635 (833)
|+..+.||+|++|.||+|.. .+++.||+|++.... ....+.+.+|+.++++++||||+++++++...+..++|+|
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~----~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e 96 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK----QQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVME 96 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc----hhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEe
Confidence 44567999999999999996 478999999984221 1234568999999999999999999999999999999999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCC
Q 003296 636 YAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715 (833)
Q Consensus 636 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~ 715 (833)
|+++++|.+++.. ..+++.++..++.|++.|++||| +.+|+||||||+||+++.++.+|++|||++........
T Consensus 97 ~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~ 170 (285)
T cd06648 97 FLEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLH---AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP 170 (285)
T ss_pred ccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCc
Confidence 9999999999875 35899999999999999999999 78999999999999999999999999998875532221
Q ss_pred CCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCch
Q 003296 716 TGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSL 795 (833)
Q Consensus 716 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (833)
......|++.|+|||+..+..++.++|||||||++|||++|+.||........ ....... .. +....
T Consensus 171 --~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~-~~~~~~~--~~-----~~~~~--- 237 (285)
T cd06648 171 --RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQA-MKRIRDN--LP-----PKLKN--- 237 (285)
T ss_pred --ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHH-HHHHHhc--CC-----CCCcc---
Confidence 11335689999999999888899999999999999999999999975443222 1111111 00 00000
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 796 AVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 796 ~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.......+.+++.+||+.+|++||++.|++++
T Consensus 238 -~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 238 -LHKVSPRLRSFLDRMLVRDPAQRATAAELLNH 269 (285)
T ss_pred -cccCCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence 01133568899999999999999999999864
No 304
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.2e-36 Score=320.11 Aligned_cols=255 Identities=18% Similarity=0.278 Sum_probs=201.0
Q ss_pred cCCccccccCcccEEEEEEc-CCCceEEEEEccccch--hhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 557 ANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDK--IFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
|+..+.||+|+||.||+|.. .+|+.||+|.+..... .......+.+.+|++++++++|||||++++++.+.+..++|
T Consensus 2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v 81 (268)
T cd06630 2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLF 81 (268)
T ss_pred ccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEE
Confidence 66778999999999999996 5789999999852211 11112346799999999999999999999999999999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCC-CceeccceeeeeeCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLK-EPQIGDIELCKVIDP 712 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~-~~ki~dfgl~~~~~~ 712 (833)
|||+++|+|.+++.. ...+++..+..++.|++.||+||| +.+++||||||+||+++.++ .+|++|||.+.....
T Consensus 82 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~ql~~al~~LH---~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~ 156 (268)
T cd06630 82 VEWMAGGSVSHLLSK--YGAFKEAVIINYTEQLLRGLSYLH---ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAA 156 (268)
T ss_pred EeccCCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccccccccccc
Confidence 999999999999975 346899999999999999999999 78999999999999998776 589999999877643
Q ss_pred CCCC--CccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccH--HHHHHHhhcccccccccccc
Q 003296 713 SKST--GSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNEL--AKWVLRNSAQQDKLDHILDF 788 (833)
Q Consensus 713 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 788 (833)
.... .......||..|+|||++.+..++.++||||+||++|||++|+.||...... .......... ...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~------~~~- 229 (268)
T cd06630 157 KGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASA------TTA- 229 (268)
T ss_pred ccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhcc------CCC-
Confidence 2211 1112356899999999998888999999999999999999999999643221 1111110000 000
Q ss_pred cccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 789 NVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.........++.+++.+|++.+|++||++.|++++
T Consensus 230 -----~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 230 -----PSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred -----CCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 01112344678899999999999999999999864
No 305
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=8.9e-37 Score=325.84 Aligned_cols=265 Identities=18% Similarity=0.175 Sum_probs=198.6
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCC-CCCcccceEEEecCCc----
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLS-NSNVMTPLAYVLASDS---- 629 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~~---- 629 (833)
+|+..+.||+|+||.||+|... +|+.||||++.... ......+.+.+|++++++++ ||||+++++++...+.
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~--~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 79 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEM--DEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP 79 (295)
T ss_pred CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhc--cccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence 5778899999999999999974 79999999984221 12223467899999999995 6999999999987665
Q ss_pred -eEEEEeeCCCCChhhhhhcCC---CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCC-CCCceeccc
Q 003296 630 -AYLFYEYAPKGTLFDVLHGCL---ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKS-LKEPQIGDI 704 (833)
Q Consensus 630 -~~lv~ey~~~g~L~~~l~~~~---~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~-~~~~ki~df 704 (833)
.|+||||+++ +|.+++.... ...+++..+..++.|+++||+||| ..+|+||||||+||+++. ++.+|++||
T Consensus 80 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~~~nil~~~~~~~~kl~df 155 (295)
T cd07837 80 SLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH---KHGVMHRDLKPQNLLVDKQKGLLKIADL 155 (295)
T ss_pred eEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEecCCCeEEEeec
Confidence 8999999985 8999886432 235899999999999999999999 789999999999999998 889999999
Q ss_pred eeeeeeCCCCCCCccccccccccccccccccC-CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccc
Q 003296 705 ELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLD 783 (833)
Q Consensus 705 gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 783 (833)
|+++....... ......+++.|+|||++.+ ..++.++|||||||++|||++|..||.+...................
T Consensus 156 g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (295)
T cd07837 156 GLGRAFSIPVK--SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTE 233 (295)
T ss_pred ccceecCCCcc--ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 99986533221 1123467889999998865 45789999999999999999999999765544333221111000000
Q ss_pred ccc----c-------ccccCC--chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 784 HIL----D-------FNVSRT--SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 784 ~~~----~-------~~~~~~--~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
... + +..... .........++.+++.+||+.||++||++.|++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 234 QVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred hhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 000 0 000000 00011234678899999999999999999999864
No 306
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=2e-36 Score=316.25 Aligned_cols=251 Identities=20% Similarity=0.297 Sum_probs=199.5
Q ss_pred CCccccccCcccEEEEEEcCC-----CceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEE
Q 003296 558 NPLNVELKTRFSTYYKAVMPS-----GMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYL 632 (833)
Q Consensus 558 ~~~~~ig~g~~g~vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 632 (833)
...+.||.|+||.||+|+..+ +..||+|++..... ....+.+.+|++++++++||||+++++++...+..++
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 78 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD---EQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMI 78 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC---hHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEE
Confidence 456789999999999999753 48899999942211 1145789999999999999999999999999999999
Q ss_pred EEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCC
Q 003296 633 FYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDP 712 (833)
Q Consensus 633 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~ 712 (833)
||||+++|+|.+++.......++|.++..++.|++.|++||| +.+++||||||+||+++.++.++++|||+++....
T Consensus 79 i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh---~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 155 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYD 155 (258)
T ss_pred EEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHh---cCCeeecccccceEEEccCCeEEEcccCCceeccc
Confidence 999999999999998643333899999999999999999999 78999999999999999999999999999987654
Q ss_pred CCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhccccccccccccccc
Q 003296 713 SKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVS 791 (833)
Q Consensus 713 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (833)
...... ....+++.|+|||...+..++.++||||+||++|||++ |+.||..... .......... ... ..
T Consensus 156 ~~~~~~-~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~-~~~~~~~~~~-~~~------~~- 225 (258)
T smart00219 156 DDYYKK-KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN-EEVLEYLKKG-YRL------PK- 225 (258)
T ss_pred cccccc-ccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHhcC-CCC------CC-
Confidence 322111 12337889999999988889999999999999999998 7888864322 2221111111 100 00
Q ss_pred CCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 003296 792 RTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRML 829 (833)
Q Consensus 792 ~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L 829 (833)
....+.++.+++.+|+..||++|||+.|+++.|
T Consensus 226 -----~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 226 -----PENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -----CCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 011345788899999999999999999998864
No 307
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=6.8e-37 Score=323.43 Aligned_cols=248 Identities=20% Similarity=0.218 Sum_probs=195.2
Q ss_pred cccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEeeCCCCC
Q 003296 563 ELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGT 641 (833)
Q Consensus 563 ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey~~~g~ 641 (833)
||+|+||+||+|.. .+|+.||+|.+... ........+.|.+|++++++++||||+++++++...+..|+||||+++|+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKK-RLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGD 79 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehh-hhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCc
Confidence 68999999999986 47899999998422 22222345677899999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCcccc
Q 003296 642 LFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLST 721 (833)
Q Consensus 642 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~~~~ 721 (833)
|.+++.......+++.++..++.|++.|+.||| ..+++||||||+||++++++.+|++|||++....... ....
T Consensus 80 L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~---~~~~ 153 (277)
T cd05577 80 LKYHIYNVGEPGFPEARAIFYAAQIICGLEHLH---QRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK---KIKG 153 (277)
T ss_pred HHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCC---cccc
Confidence 999998654457899999999999999999999 7899999999999999999999999999987654321 1234
Q ss_pred ccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchhHHHHH
Q 003296 722 VAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQM 801 (833)
Q Consensus 722 ~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 (833)
..|+..|+|||+..+..++.++|||||||++|||++|+.||.............. ..... .... .....
T Consensus 154 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~--~~~~------~~~~~ 222 (277)
T cd05577 154 RAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKR---RTLEM--AVEY------PDKFS 222 (277)
T ss_pred ccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHh---ccccc--cccC------CccCC
Confidence 5688899999999888899999999999999999999999975432111000000 00000 0000 11224
Q ss_pred HHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 003296 802 LTVLKVAVACVSVSPEARP-----KMKSVLRM 828 (833)
Q Consensus 802 ~~~~~l~~~cl~~dP~~Rp-----s~~evl~~ 828 (833)
..+.+++.+||+.||++|| ++.+++.|
T Consensus 223 ~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h 254 (277)
T cd05577 223 PEAKDLCEALLQKDPEKRLGCRGGSADEVREH 254 (277)
T ss_pred HHHHHHHHHHccCChhHccCCCcccHHHHHhC
Confidence 5678999999999999999 66667653
No 308
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=5.1e-37 Score=326.48 Aligned_cols=255 Identities=19% Similarity=0.212 Sum_probs=195.8
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCC-CCCcccceEEEecCCceEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLS-NSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~~~~lv 633 (833)
+|...+.||+|+||.||++... +|+.||||++..... ......+.+|+.++.++. |||||++++++..++..++|
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~ 81 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVD---EKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWIC 81 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccC---hHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEE
Confidence 4556678999999999999974 789999999842211 123567899999999996 99999999999999999999
Q ss_pred EeeCCCCChhhh---hhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeee
Q 003296 634 YEYAPKGTLFDV---LHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVI 710 (833)
Q Consensus 634 ~ey~~~g~L~~~---l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~ 710 (833)
|||++. ++.++ +.......+++..+..++.|++.||+|||+ ..+|+||||||+||+++.++.+|++|||+++..
T Consensus 82 ~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 158 (288)
T cd06616 82 MELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQL 158 (288)
T ss_pred EecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh--cCCeeccCCCHHHEEEccCCcEEEeecchhHHh
Confidence 999864 55443 332223568999999999999999999994 358999999999999999999999999998765
Q ss_pred CCCCCCCccccccccccccccccccCC---cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccccccc
Q 003296 711 DPSKSTGSLSTVAGSVGYIPPEYAYTM---RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILD 787 (833)
Q Consensus 711 ~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (833)
..... .....|++.|+|||++.+. .++.++|||||||++|||++|+.||................ . .
T Consensus 159 ~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-~------~ 228 (288)
T cd06616 159 VDSIA---KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKG-D------P 228 (288)
T ss_pred ccCCc---cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCC-C------C
Confidence 32221 1334689999999998765 68999999999999999999999997544222221111111 0 0
Q ss_pred ccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 788 FNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
+..... .....+.++.+++.+||+.||++|||++||+++
T Consensus 229 ~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 229 PILSNS--EEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred CcCCCc--CCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 011100 011345578899999999999999999999875
No 309
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=2.2e-36 Score=325.87 Aligned_cols=250 Identities=21% Similarity=0.292 Sum_probs=198.3
Q ss_pred HhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
+.|+..+.||+|+||.||+|+. .+|..||+|++..... ......+.+.+|++++++++|||+|+++++|..++..++|
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 103 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGK-QSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLV 103 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCC-CchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEE
Confidence 3466778999999999999996 4789999999843211 1122345789999999999999999999999999999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
|||++ |++.+.+... ...++|.++..++.|++.|+.||| ..+|+||||||+||+++.++.+|++|||++......
T Consensus 104 ~e~~~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH---~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (317)
T cd06635 104 MEYCL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPA 178 (317)
T ss_pred EeCCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcccEEECCCCCEEEecCCCccccCCc
Confidence 99997 5888877643 346899999999999999999999 789999999999999999999999999998754321
Q ss_pred CCCCcccccccccccccccccc---CCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccc
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAY---TMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNV 790 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (833)
....|++.|+|||++. .+.++.++|||||||++|||++|+.||............. .. ..
T Consensus 179 ------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~-~~-~~--------- 241 (317)
T cd06635 179 ------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA-QN-ES--------- 241 (317)
T ss_pred ------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH-hc-cC---------
Confidence 2456899999999874 4568899999999999999999999997543322221111 11 00
Q ss_pred cCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 003296 791 SRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRML 829 (833)
Q Consensus 791 ~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L 829 (833)
... ........+.+++.+||+.+|++||++.||+++.
T Consensus 242 ~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 278 (317)
T cd06635 242 PTL--QSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHM 278 (317)
T ss_pred CCC--CCccccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence 000 0112344678999999999999999999999874
No 310
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-37 Score=324.73 Aligned_cols=252 Identities=19% Similarity=0.309 Sum_probs=202.4
Q ss_pred CCccccccCcccEEEEEEcC---CC--ceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEE
Q 003296 558 NPLNVELKTRFSTYYKAVMP---SG--MSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYL 632 (833)
Q Consensus 558 ~~~~~ig~g~~g~vy~~~~~---~~--~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 632 (833)
...+.||.|.||.||+|+.. .| -.||||.-+.... ....+.|.+|.-+|++++|||||+++|.|.+ ...|+
T Consensus 392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t---~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~Wi 467 (974)
T KOG4257|consen 392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCT---PDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWI 467 (974)
T ss_pred cHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCC---hhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeE
Confidence 45679999999999999952 34 3578887743222 2346889999999999999999999999975 56799
Q ss_pred EEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCC
Q 003296 633 FYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDP 712 (833)
Q Consensus 633 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~ 712 (833)
|||.++-|.|.++|+.. +..++......++.|++.||+||| +.++|||||...|||+.+..-+|++|||+++.+..
T Consensus 468 vmEL~~~GELr~yLq~n-k~sL~l~tL~ly~~Qi~talaYLe---SkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed 543 (974)
T KOG4257|consen 468 VMELAPLGELREYLQQN-KDSLPLRTLTLYCYQICTALAYLE---SKRFVHRDIAARNILVSSPQCVKLADFGLSRYLED 543 (974)
T ss_pred EEecccchhHHHHHHhc-cccchHHHHHHHHHHHHHHHHHHH---hhchhhhhhhhhheeecCcceeeecccchhhhccc
Confidence 99999999999999864 456888899999999999999999 88999999999999999999999999999998876
Q ss_pred CCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhccccccccccccccc
Q 003296 713 SKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVS 791 (833)
Q Consensus 713 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (833)
...... +...-...|||||.+.-.+++.++|||-|||.+||+++ |.+||.+-.. .+.+..+-.. -+
T Consensus 544 ~~yYka-S~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkN-----------sDVI~~iEnG-eR 610 (974)
T KOG4257|consen 544 DAYYKA-SRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKN-----------SDVIGHIENG-ER 610 (974)
T ss_pred cchhhc-cccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccc-----------cceEEEecCC-CC
Confidence 544332 23334568999999999999999999999999999976 9999974221 1222221111 11
Q ss_pred CCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 792 RTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 792 ~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
.+.++.+++.+..++.+||+.||.+||.+.|+...|.++
T Consensus 611 --lP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv 649 (974)
T KOG4257|consen 611 --LPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDV 649 (974)
T ss_pred --CCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHH
Confidence 112235667788999999999999999999999888765
No 311
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.3e-36 Score=321.39 Aligned_cols=249 Identities=16% Similarity=0.277 Sum_probs=199.7
Q ss_pred hcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCC---CCCcccceEEEecCCceE
Q 003296 556 VANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLS---NSNVMTPLAYVLASDSAY 631 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~~~~~~~~~~~~~ 631 (833)
.|+..+.||+|+||.||+|.. .+|..||||.+.... .....+++.+|++++++++ |||+++++++|...+..+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~ 78 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT---PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLW 78 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC---CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEE
Confidence 466778999999999999996 578999999984221 1223467889999999997 999999999999999999
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeC
Q 003296 632 LFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711 (833)
Q Consensus 632 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~ 711 (833)
+||||+++++|.++++. ..++|.....++.|+++||.||| ..+|+||||+|+||+++.++.++++|||++....
T Consensus 79 lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06917 79 IIMEYAEGGSVRTLMKA---GPIAEKYISVIIREVLVALKYIH---KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLN 152 (277)
T ss_pred EEEecCCCCcHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHHEEEcCCCCEEEccCCceeecC
Confidence 99999999999999874 36899999999999999999999 7899999999999999999999999999998765
Q ss_pred CCCCCCccccccccccccccccccCC-cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccc
Q 003296 712 PSKSTGSLSTVAGSVGYIPPEYAYTM-RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNV 790 (833)
Q Consensus 712 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (833)
.... ......|+..|+|||++.++ .++.++|||||||++|||++|+.||.+.... .+..... . ...+.+
T Consensus 153 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-~~~~~~~-~------~~~~~~ 222 (277)
T cd06917 153 QNSS--KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF-RAMMLIP-K------SKPPRL 222 (277)
T ss_pred CCcc--ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh-hhhhccc-c------CCCCCC
Confidence 4332 12345799999999988654 4789999999999999999999999754321 1111100 0 000111
Q ss_pred cCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 791 SRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 791 ~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.. ...+.++.+++.+||+.||++||++.|++++
T Consensus 223 ~~-----~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 223 ED-----NGYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred Cc-----ccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 10 1134578899999999999999999999874
No 312
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=7.4e-37 Score=332.41 Aligned_cols=265 Identities=19% Similarity=0.286 Sum_probs=199.0
Q ss_pred HHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCC----
Q 003296 554 EAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD---- 628 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~---- 628 (833)
+++|+..+.||+|+||.||+|+. .+|+.||||++.... .......+.+|++++++++|||||++++++....
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 80 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE---HQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESF 80 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc---cchhHHHHHHHHHHHHhCCCCCcCchhheeeccccccc
Confidence 45788889999999999999986 579999999984211 1223467889999999999999999999876543
Q ss_pred -ceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceee
Q 003296 629 -SAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELC 707 (833)
Q Consensus 629 -~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~ 707 (833)
..|+||||+++ +|.+++.. ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+|++|||++
T Consensus 81 ~~~~lv~e~~~~-~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~ 153 (336)
T cd07849 81 NDVYIVQELMET-DLYKLIKT---QHLSNDHIQYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTNCDLKICDFGLA 153 (336)
T ss_pred ceEEEEehhccc-CHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEECcccce
Confidence 47999999974 88888764 46899999999999999999999 789999999999999999999999999999
Q ss_pred eeeCCCCCC-CccccccccccccccccccC-CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHH--hhcc--ccc
Q 003296 708 KVIDPSKST-GSLSTVAGSVGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLR--NSAQ--QDK 781 (833)
Q Consensus 708 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~--~~~~--~~~ 781 (833)
+........ .......||+.|||||++.+ ..++.++||||+||++|||++|+.||.+......+... .... .+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~ 233 (336)
T cd07849 154 RIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQED 233 (336)
T ss_pred eeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHH
Confidence 876432211 11234578999999998754 46889999999999999999999999754432222111 0000 000
Q ss_pred ccccccccc---------cCC-c--hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 782 LDHILDFNV---------SRT-S--LAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 782 ~~~~~~~~~---------~~~-~--~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
...+.+... ... . ........++.+++.+||+.||++|||+.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 234 LNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 111110000 000 0 0011234578899999999999999999999886
No 313
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=1.1e-36 Score=324.90 Aligned_cols=265 Identities=15% Similarity=0.187 Sum_probs=198.6
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
+|+..+.||+|+||.||+|... +|+.||+|++.... ......+.+.+|++++++++||||+++++++...+..|+||
T Consensus 3 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (294)
T PLN00009 3 QYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQ--EDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVF 80 (294)
T ss_pred ceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhcc--ccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEE
Confidence 5777889999999999999975 78999999984221 11233467889999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCC-CCCceeccceeeeeeCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKS-LKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~-~~~~ki~dfgl~~~~~~~ 713 (833)
||++ ++|.+++........++.....++.|++.||+||| ..+|+||||||+||+++. ++.+|++|||++......
T Consensus 81 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~ 156 (294)
T PLN00009 81 EYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCH---SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP 156 (294)
T ss_pred eccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCcceEEEECCCCEEEEcccccccccCCC
Confidence 9996 58888886544445688888899999999999999 789999999999999985 457899999999765322
Q ss_pred CCCCccccccccccccccccccCC-cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccccccc-----
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTM-RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILD----- 787 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----- 787 (833)
.. ......|++.|+|||++.+. .++.++||||+||++|||+||+.||........................+
T Consensus 157 ~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (294)
T PLN00009 157 VR--TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSL 234 (294)
T ss_pred cc--ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccc
Confidence 11 12345678999999988654 57899999999999999999999997554433322211100000000000
Q ss_pred -------ccccCCc--hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 788 -------FNVSRTS--LAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 788 -------~~~~~~~--~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
+...... ........++.+++.+|++.+|++||++.|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 235 PDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred hhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000000 0011234567899999999999999999999874
No 314
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=2.3e-36 Score=317.06 Aligned_cols=254 Identities=22% Similarity=0.319 Sum_probs=201.8
Q ss_pred cCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEe
Q 003296 557 ANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYE 635 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 635 (833)
|...+.||+|+||.||+|... +++.||+|.++.... .....+.+.+|++++++++||||+++++++...+..++|+|
T Consensus 2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06626 2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDN--DPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFME 79 (264)
T ss_pred ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECccc--chHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEe
Confidence 567789999999999999964 789999999853221 12345789999999999999999999999999999999999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCC
Q 003296 636 YAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715 (833)
Q Consensus 636 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~ 715 (833)
|+++++|.+++.. ...+++..+..++.|++.|++||| +.+|+||||||+||++++++.+|++|||++........
T Consensus 80 ~~~~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~ 154 (264)
T cd06626 80 YCSGGTLEELLEH--GRILDEHVIRVYTLQLLEGLAYLH---SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTT 154 (264)
T ss_pred cCCCCcHHHHHhh--cCCCChHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCC
Confidence 9999999999986 345789999999999999999999 78899999999999999999999999999887643322
Q ss_pred CCc--cccccccccccccccccCCc---ccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccc
Q 003296 716 TGS--LSTVAGSVGYIPPEYAYTMR---VTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNV 790 (833)
Q Consensus 716 ~~~--~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (833)
... .....|++.|+|||++.+.. ++.++|||||||++||+++|+.||................ . .+..
T Consensus 155 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~--~-----~~~~ 227 (264)
T cd06626 155 TMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAG--H-----KPPI 227 (264)
T ss_pred cccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcC--C-----CCCC
Confidence 110 12356889999999988766 8899999999999999999999997543322222111110 0 0011
Q ss_pred cCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 791 SRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 791 ~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
+. .......+.+++.+||+.+|++|||+.|++.+
T Consensus 228 ~~----~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 228 PD----SLQLSPEGKDFLDRCLESDPKKRPTASELLQH 261 (264)
T ss_pred Cc----ccccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 10 11224567789999999999999999999864
No 315
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=2.5e-36 Score=320.12 Aligned_cols=260 Identities=19% Similarity=0.235 Sum_probs=195.2
Q ss_pred cCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCC-CCCcccceEEEecC--CceEE
Q 003296 557 ANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLS-NSNVMTPLAYVLAS--DSAYL 632 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~--~~~~l 632 (833)
|+..+.+|+|+||.||+|+. .+++.||+|+++.... ........+|+.+++++. ||||+++++++.++ +..++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~---~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~l 77 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFK---SLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLAL 77 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccC---CchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEE
Confidence 45678899999999999996 4789999999843211 122334568999999996 99999999999987 88999
Q ss_pred EEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCC
Q 003296 633 FYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDP 712 (833)
Q Consensus 633 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~ 712 (833)
||||++ |++.+.+... ...++|.++..++.|++.||+||| ..+|+||||||+||+++. +.+|++|||+++....
T Consensus 78 v~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~ 151 (282)
T cd07831 78 VFELMD-MNLYELIKGR-KRPLPEKRVKSYMYQLLKSLDHMH---RNGIFHRDIKPENILIKD-DILKLADFGSCRGIYS 151 (282)
T ss_pred EEecCC-ccHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEcC-CCeEEEeccccccccc
Confidence 999997 5888888753 246899999999999999999999 788999999999999999 9999999999987643
Q ss_pred CCCCCccccccccccccccccccC-CcccccCcchhhHHHHHHHHhCCCcccCCccHHH--HHHHhhccccc-------c
Q 003296 713 SKSTGSLSTVAGSVGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAK--WVLRNSAQQDK-------L 782 (833)
Q Consensus 713 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~--~~~~~~~~~~~-------~ 782 (833)
... .....++..|+|||++.. ..++.++|||||||++|||++|+.||.+...... +.......... .
T Consensus 152 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (282)
T cd07831 152 KPP---YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRK 228 (282)
T ss_pred CCC---cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcc
Confidence 321 133568999999997654 4578999999999999999999999975543221 11111100000 0
Q ss_pred cccccccccCC-----chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 783 DHILDFNVSRT-----SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 783 ~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
....+...... .......+.++.+++.+||+++|++||+++|++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 229 SRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred cccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 00000000000 00011345788999999999999999999999875
No 316
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=1.2e-36 Score=318.19 Aligned_cols=249 Identities=18% Similarity=0.199 Sum_probs=201.9
Q ss_pred cCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEe
Q 003296 557 ANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYE 635 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 635 (833)
|...+.||.|+||.||+|... +|+.||+|.+.. .........+.+.+|++++++++||||+++++++..++..++|||
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~-~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNK-QKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred ceEEEEeccCCCceEEEEEEccCCcEEEEEEEeh-hhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 667789999999999999975 699999999942 222222345789999999999999999999999999999999999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCC
Q 003296 636 YAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715 (833)
Q Consensus 636 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~ 715 (833)
|+++++|.+++... ..+++.++..++.|+++||.||| ..+++|+||||+||++++++.++++|||++.......
T Consensus 81 ~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~- 154 (258)
T cd05578 81 LLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT- 154 (258)
T ss_pred CCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc-
Confidence 99999999999763 46899999999999999999999 7889999999999999999999999999987654332
Q ss_pred CCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccH-HHHHHHhhcccccccccccccccCCc
Q 003296 716 TGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNEL-AKWVLRNSAQQDKLDHILDFNVSRTS 794 (833)
Q Consensus 716 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (833)
......|+..|+|||++.+..++.++|||||||++|+|++|+.||...... ..+....... ... ..
T Consensus 155 --~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~----~~---- 221 (258)
T cd05578 155 --LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET---ADV----LY---- 221 (258)
T ss_pred --cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc---ccc----cC----
Confidence 123457889999999998888999999999999999999999999854431 1111111110 000 00
Q ss_pred hhHHHHHHHHHHHHHhccCCCCCCCCCH--HHHHH
Q 003296 795 LAVRSQMLTVLKVAVACVSVSPEARPKM--KSVLR 827 (833)
Q Consensus 795 ~~~~~~~~~~~~l~~~cl~~dP~~Rps~--~evl~ 827 (833)
....+..+.+++.+||+.||.+||++ +|+++
T Consensus 222 --~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~ 254 (258)
T cd05578 222 --PATWSTEAIDAINKLLERDPQKRLGDNLKDLKN 254 (258)
T ss_pred --cccCcHHHHHHHHHHccCChhHcCCccHHHHhc
Confidence 11223577899999999999999999 77664
No 317
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=2.4e-36 Score=320.87 Aligned_cols=253 Identities=19% Similarity=0.279 Sum_probs=204.5
Q ss_pred HHHhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceE
Q 003296 553 MEAVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAY 631 (833)
Q Consensus 553 ~~~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~ 631 (833)
.++.|+..+.+|+|+||.||+|..+ ++..||+|++..... ..+.+.+|++++++++||||+++++++..++..|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 91 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-----NKELIINEILIMKDCKHPNIVDYYDSYLVGDELW 91 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-----hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEE
Confidence 3455677789999999999999986 789999999942221 3567899999999999999999999999999999
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeC
Q 003296 632 LFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711 (833)
Q Consensus 632 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~ 711 (833)
+|+||+++++|.+++.... ..+++..+..++.|++.||+||| ..+|+|+|+||+||+++.++.+||+|||++....
T Consensus 92 lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH---~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~ 167 (286)
T cd06614 92 VVMEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLH---SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLT 167 (286)
T ss_pred EEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCChhhEEEcCCCCEEECccchhhhhc
Confidence 9999999999999998642 36999999999999999999999 7899999999999999999999999999987554
Q ss_pred CCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccccccccccc
Q 003296 712 PSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVS 791 (833)
Q Consensus 712 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (833)
.... ......|+..|+|||++.+..++.++|||||||++|||++|+.||............. .. .....
T Consensus 168 ~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~-~~--~~~~~------ 236 (286)
T cd06614 168 KEKS--KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLIT-TK--GIPPL------ 236 (286)
T ss_pred cchh--hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-hc--CCCCC------
Confidence 3221 1134568899999999988889999999999999999999999997544332211111 10 00000
Q ss_pred CCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 792 RTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 792 ~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.........+.+++.+|++.+|.+||++.||+.+
T Consensus 237 ---~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 237 ---KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred ---cchhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 0111234567899999999999999999999864
No 318
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-36 Score=304.86 Aligned_cols=263 Identities=20% Similarity=0.248 Sum_probs=198.0
Q ss_pred HHHhcCCccccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhc--CCCCCcccceEEEecC---
Q 003296 553 MEAVANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGK--LSNSNVMTPLAYVLAS--- 627 (833)
Q Consensus 553 ~~~~~~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~~~~~~~~~--- 627 (833)
....-...+.||+|+||.|++|.+ .|..||||++.. .+++.+.+|.+|.+. +||+||..+++.-..+
T Consensus 209 iarqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~s-------rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs 280 (513)
T KOG2052|consen 209 IARQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSS-------RDERSWFRETEIYQTVMLRHENILGFIAADNKDNGS 280 (513)
T ss_pred hhheeEEEEEecCccccceeeccc-cCCceEEEEecc-------cchhhhhhHHHHHHHHHhccchhhhhhhccccCCCc
Confidence 334455678999999999999998 689999999942 235678899998876 5999999999876543
Q ss_pred -CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhc-----CCCCCeeecCCCccceeeCCCCCcee
Q 003296 628 -DSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHG-----FTSNPILLLDLSTRNIFLKSLKEPQI 701 (833)
Q Consensus 628 -~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~-----~~~~~iiHrdlk~~Nill~~~~~~ki 701 (833)
.++|||.||-+.|||+|+|.. ..++-...++++..+|.||+|||. ..++.|.|||||+.|||+.+++.+.|
T Consensus 281 ~TQLwLvTdYHe~GSL~DyL~r---~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~I 357 (513)
T KOG2052|consen 281 WTQLWLVTDYHEHGSLYDYLNR---NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI 357 (513)
T ss_pred eEEEEEeeecccCCcHHHHHhh---ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEE
Confidence 258999999999999999985 568999999999999999999993 35678999999999999999999999
Q ss_pred ccceeeeeeCCCCCC--CccccccccccccccccccCCc----cc--ccCcchhhHHHHHHHHhC----------CCccc
Q 003296 702 GDIELCKVIDPSKST--GSLSTVAGSVGYIPPEYAYTMR----VT--MAGNVYSFGVILLELLTG----------KTAVN 763 (833)
Q Consensus 702 ~dfgl~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~----~~--~~~Dv~S~Gvvl~elltg----------~~p~~ 763 (833)
+|+|+|......... ......+||.+|||||++.... +. ..+||||||.|+||+.-+ +.||.
T Consensus 358 ADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyy 437 (513)
T KOG2052|consen 358 ADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYY 437 (513)
T ss_pred eeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcc
Confidence 999999876543221 1224578999999999986431 22 459999999999999753 45766
Q ss_pred CCccH---HHHHHHhhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 764 QGNEL---AKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 764 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
+-.+. .+.+.... ..++++..++.. ....+.+..+.+++..||..+|+.|-|+--|-+.|.++
T Consensus 438 d~Vp~DPs~eeMrkVV-Cv~~~RP~ipnr-----W~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l 503 (513)
T KOG2052|consen 438 DVVPSDPSFEEMRKVV-CVQKLRPNIPNR-----WKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKL 503 (513)
T ss_pred cCCCCCCCHHHHhcce-eecccCCCCCcc-----cccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHH
Confidence 32211 11111111 111111111111 12235677889999999999999999998888777653
No 319
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=2.3e-36 Score=316.97 Aligned_cols=251 Identities=21% Similarity=0.287 Sum_probs=205.2
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
+|+..+.||+|++|.||+|+.. +|+.||||++...... ...+.|.+|++++++++||||+++++++...+..++||
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE---EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVL 78 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch---HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEE
Confidence 5777899999999999999986 6999999998532211 33578999999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCC-CCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTS-NPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~-~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
||+++++|.+++... ..+++..+..++.|+++|++||| . .+++||||+|+||+++.++.++++|||++......
T Consensus 79 e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh---~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~ 153 (264)
T cd06623 79 EYMDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLH---TKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENT 153 (264)
T ss_pred EecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHh---ccCCCccCCCCHHHEEECCCCCEEEccCccceecccC
Confidence 999999999999763 56899999999999999999999 7 89999999999999999999999999999876433
Q ss_pred CCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCc--cHHHHHHHhhccccccccccccccc
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGN--ELAKWVLRNSAQQDKLDHILDFNVS 791 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (833)
... .....|+..|+|||+..+..++.++||||||+++|||+||+.||.... ...+........ .. +...
T Consensus 154 ~~~--~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~--~~-----~~~~ 224 (264)
T cd06623 154 LDQ--CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDG--PP-----PSLP 224 (264)
T ss_pred CCc--ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcC--CC-----CCCC
Confidence 321 134568999999999988889999999999999999999999997554 222211111100 00 0010
Q ss_pred CCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 792 RTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 792 ~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
. ...+..+.+++.+|++.+|++||++.|++++
T Consensus 225 ~-----~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 225 A-----EEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred c-----ccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0 0134578899999999999999999999875
No 320
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-38 Score=351.89 Aligned_cols=256 Identities=18% Similarity=0.182 Sum_probs=206.5
Q ss_pred HHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEE
Q 003296 554 EAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYL 632 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 632 (833)
.++|++.++||+|+||.|..+++ .+++.||+|+++ +...........|+.|-.+|.--+.+.||.++-+|+++.++|+
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~ln-K~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYl 152 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILN-KWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYL 152 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEeeccccchhHHHhh-HHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEE
Confidence 46788899999999999999997 479999999994 3333334456789999999999999999999999999999999
Q ss_pred EEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCC
Q 003296 633 FYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDP 712 (833)
Q Consensus 633 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~ 712 (833)
|||||+||||..++.+.. .+++.-+..|+..|+-||.-+| +.|+|||||||+|||||..|++|++|||.|-.+..
T Consensus 153 VMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH---~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~ 227 (1317)
T KOG0612|consen 153 VMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLH---SMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDA 227 (1317)
T ss_pred EEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHH---hccceeccCCcceeEecccCcEeeccchhHHhcCC
Confidence 999999999999998743 6888888889999999999999 89999999999999999999999999999987764
Q ss_pred CCCCCcccccccccccccccccc----C-CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccccccc
Q 003296 713 SKSTGSLSTVAGSVGYIPPEYAY----T-MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILD 787 (833)
Q Consensus 713 ~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (833)
... ......+|||.|.+||++. + +.|+..+|+||+||++|||+.|..||+...-...+- .+++
T Consensus 228 dG~-V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~-----------KIm~ 295 (1317)
T KOG0612|consen 228 DGT-VRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYG-----------KIMN 295 (1317)
T ss_pred CCc-EEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHH-----------HHhc
Confidence 442 2446789999999999875 3 569999999999999999999999998543322221 1222
Q ss_pred ccccCCchhHHHHHHHHHHHHHhccCCCCCCCCC---HHHHHHH
Q 003296 788 FNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPK---MKSVLRM 828 (833)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps---~~evl~~ 828 (833)
..-.-..+.....+.++.++|.+.+. +|+.|.. ++|+-.|
T Consensus 296 hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~H 338 (1317)
T KOG0612|consen 296 HKESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNH 338 (1317)
T ss_pred hhhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhC
Confidence 11111111222466778888887665 7888887 8887654
No 321
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=2.5e-36 Score=324.53 Aligned_cols=265 Identities=20% Similarity=0.246 Sum_probs=199.0
Q ss_pred HhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecC--CceE
Q 003296 555 AVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS--DSAY 631 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~--~~~~ 631 (833)
++|+..+.||+|+||.||+|.. .+|+.||+|+++... ........+.+|++++++++||||+++++++... +..+
T Consensus 7 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 7 TEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDN--ERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred cceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEecc--CCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 4688889999999999999997 479999999984221 1122234567899999999999999999999765 5689
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeC
Q 003296 632 LFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711 (833)
Q Consensus 632 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~ 711 (833)
+||||+++ +|.+++... ...++|.++..++.|+++||+||| ..+++||||||+||++++++.+|++|||+++...
T Consensus 85 lv~e~~~~-~l~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~ 159 (309)
T cd07845 85 LVMEYCEQ-DLASLLDNM-PTPFSESQVKCLMLQLLRGLQYLH---ENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYG 159 (309)
T ss_pred EEEecCCC-CHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccceeeecC
Confidence 99999974 898888753 246899999999999999999999 7889999999999999999999999999998765
Q ss_pred CCCCCCccccccccccccccccccC-CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccc----
Q 003296 712 PSKSTGSLSTVAGSVGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHIL---- 786 (833)
Q Consensus 712 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---- 786 (833)
.... ......+++.|+|||++.+ ..++.++||||+||++|||++|+.||................+.......
T Consensus 160 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
T cd07845 160 LPAK--PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFS 237 (309)
T ss_pred CccC--CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhh
Confidence 3321 1233456889999998865 45789999999999999999999999755443322111110000000000
Q ss_pred ------cccccCCc-----hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 787 ------DFNVSRTS-----LAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 787 ------~~~~~~~~-----~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
........ ........++.+++.+|++.||++|||++|++.|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 238 DLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred cccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00000000 0001124567899999999999999999999875
No 322
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=2e-36 Score=322.67 Aligned_cols=265 Identities=20% Similarity=0.226 Sum_probs=199.5
Q ss_pred HhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecC--CceE
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS--DSAY 631 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~--~~~~ 631 (833)
++|+..+.||+|+||.||+|... +++.||+|+++.... .......+.+|++++++++||||+++++++... +..|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKE--KEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccc--cccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEE
Confidence 46778899999999999999975 689999999953321 122345678999999999999999999999877 8899
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeC
Q 003296 632 LFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711 (833)
Q Consensus 632 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~ 711 (833)
+||||++ ++|.+++.... ..+++..+..++.|++.||+||| ..+++||||||+||+++.++.+|++|||+++...
T Consensus 83 lv~e~~~-~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 157 (293)
T cd07843 83 MVMEYVE-HDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLH---DNWILHRDLKTSNLLLNNRGILKICDFGLAREYG 157 (293)
T ss_pred EEehhcC-cCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCcEEEeecCceeecc
Confidence 9999997 59999887532 36899999999999999999999 7889999999999999999999999999998765
Q ss_pred CCCCCCccccccccccccccccccCC-cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccc----------
Q 003296 712 PSKSTGSLSTVAGSVGYIPPEYAYTM-RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQD---------- 780 (833)
Q Consensus 712 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~---------- 780 (833)
.... ......+++.|+|||++.+. .++.++||||+||++|||++|+.||..................
T Consensus 158 ~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (293)
T cd07843 158 SPLK--PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFS 235 (293)
T ss_pred CCcc--ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhh
Confidence 3321 12345678999999988754 4689999999999999999999999754432211110000000
Q ss_pred cccccc-----cccccCCchhHHH--HHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 781 KLDHIL-----DFNVSRTSLAVRS--QMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 781 ~~~~~~-----~~~~~~~~~~~~~--~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.+.... ............. ....+.+++.+||+.||++|||+.|++.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 236 ELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred ccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 000000 0000000000001 24567899999999999999999999864
No 323
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1.7e-36 Score=331.75 Aligned_cols=263 Identities=18% Similarity=0.180 Sum_probs=201.0
Q ss_pred HHHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecC----
Q 003296 553 MEAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS---- 627 (833)
Q Consensus 553 ~~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~---- 627 (833)
..+.|+..+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|++++++++||||++++++|...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPF--QNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLE 91 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccc--cChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcc
Confidence 456788899999999999999997 489999999984221 1122345688999999999999999999998754
Q ss_pred --CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccce
Q 003296 628 --DSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIE 705 (833)
Q Consensus 628 --~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfg 705 (833)
...|+||||++ |+|.+.+.. .+++.++..++.|++.||+||| ..+|+||||||+||+++.++.+|++|||
T Consensus 92 ~~~~~~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nil~~~~~~~kL~Dfg 163 (353)
T cd07850 92 EFQDVYLVMELMD-ANLCQVIQM----DLDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFG 163 (353)
T ss_pred ccCcEEEEEeccC-CCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCc
Confidence 34799999996 588888864 2889999999999999999999 7899999999999999999999999999
Q ss_pred eeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccc---
Q 003296 706 LCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKL--- 782 (833)
Q Consensus 706 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~--- 782 (833)
+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+....|.......+...
T Consensus 164 ~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 240 (353)
T cd07850 164 LARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEF 240 (353)
T ss_pred cceeCCCCC---CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence 998764322 12345689999999999988999999999999999999999999976554333322111000000
Q ss_pred -----------------------cccccccccCC--chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 783 -----------------------DHILDFNVSRT--SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 783 -----------------------~~~~~~~~~~~--~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
........... .........++.+++.+|++.||++|||+.|++.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 241 MSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000000000 00011234567899999999999999999999875
No 324
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.5e-36 Score=329.75 Aligned_cols=267 Identities=17% Similarity=0.211 Sum_probs=201.4
Q ss_pred HHhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEec----CC
Q 003296 554 EAVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLA----SD 628 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~----~~ 628 (833)
..+|+..+.||+|+||.||+|... +|..||+|++.... ......+.+.+|+.++++++|||||++++++.. ..
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 81 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAF--DVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFK 81 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEecccc--ccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCc
Confidence 467888899999999999999974 79999999985321 122345678899999999999999999998864 34
Q ss_pred ceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeee
Q 003296 629 SAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCK 708 (833)
Q Consensus 629 ~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~ 708 (833)
..++||||+. |+|.+++.. ...+++..+..++.|+++||+||| ..+|+||||||+||++++++.+|++|||+++
T Consensus 82 ~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~ 155 (334)
T cd07855 82 DVYVVMDLME-SDLHHIIHS--DQPLTEEHIRYFLYQLLRGLKYIH---SANVIHRDLKPSNLLVNEDCELRIGDFGMAR 155 (334)
T ss_pred eEEEEEehhh-hhHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEecccccce
Confidence 6899999995 699999875 345899999999999999999999 7889999999999999999999999999998
Q ss_pred eeCCCCCC--CccccccccccccccccccC-CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccc---
Q 003296 709 VIDPSKST--GSLSTVAGSVGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKL--- 782 (833)
Q Consensus 709 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~--- 782 (833)
........ .......|+..|+|||++.+ ..++.++|||||||++|||++|+.||.+..............+...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~ 235 (334)
T cd07855 156 GLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEV 235 (334)
T ss_pred eecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHh
Confidence 76432211 11234578999999998765 4589999999999999999999999976543322211111000000
Q ss_pred ---------cccccccccCCc----hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 783 ---------DHILDFNVSRTS----LAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 783 ---------~~~~~~~~~~~~----~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
....+....... ......+.++.+++.+||+.||++||++.|++.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 236 LNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred hhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 000000000000 0012235678999999999999999999999875
No 325
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.8e-36 Score=329.62 Aligned_cols=268 Identities=19% Similarity=0.205 Sum_probs=200.6
Q ss_pred HHHHhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEecC--
Q 003296 552 AMEAVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVLAS-- 627 (833)
Q Consensus 552 ~~~~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~-- 627 (833)
...+.|+..+.||+|+||.||+|... +|+.||||++.... ........+.+|+.+++++ +||||++++++|...
T Consensus 4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~--~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~ 81 (337)
T cd07852 4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAF--RNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAEND 81 (337)
T ss_pred hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeecccc--CcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCC
Confidence 34567888899999999999999975 68999999984221 1122345678999999999 999999999998754
Q ss_pred CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceee
Q 003296 628 DSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELC 707 (833)
Q Consensus 628 ~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~ 707 (833)
...|+||||++ ++|.+++... .++|..+..++.|++.||+||| ..+|+||||||+||+++.++.+|++|||++
T Consensus 82 ~~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH---~~~i~H~dl~p~nill~~~~~~kl~d~g~~ 154 (337)
T cd07852 82 KDIYLVFEYME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIH---SGNVIHRDLKPSNILLNSDCRVKLADFGLA 154 (337)
T ss_pred ceEEEEecccc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccch
Confidence 35899999997 5999998752 6899999999999999999999 789999999999999999999999999999
Q ss_pred eeeCCCCCC---CccccccccccccccccccC-CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccc---
Q 003296 708 KVIDPSKST---GSLSTVAGSVGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQD--- 780 (833)
Q Consensus 708 ~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~--- 780 (833)
+........ .......||..|+|||++.+ ..++.++|||||||++|||+||+.||.+................
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 234 (337)
T cd07852 155 RSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSA 234 (337)
T ss_pred hccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 876433211 12234678999999998764 45789999999999999999999999754332211110000000
Q ss_pred ---------ccccccc----ccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 781 ---------KLDHILD----FNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 781 ---------~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
....+++ ...............++.+++.+||+.||++|||+.|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 235 EDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0000000 00000000111134578899999999999999999999975
No 326
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.9e-37 Score=349.16 Aligned_cols=256 Identities=23% Similarity=0.311 Sum_probs=194.5
Q ss_pred HHHHhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecC---
Q 003296 552 AMEAVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS--- 627 (833)
Q Consensus 552 ~~~~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~--- 627 (833)
+...+|+..+++|+||||.|||++.+ ||+.||||++.-+. .........+|++++++++|||||+++..|.+.
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~---s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~ 552 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA---SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAE 552 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch---HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCc
Confidence 56778888999999999999999976 99999999995332 223346788999999999999999998754320
Q ss_pred --------------------------------------------------------------------------------
Q 003296 628 -------------------------------------------------------------------------------- 627 (833)
Q Consensus 628 -------------------------------------------------------------------------------- 627 (833)
T Consensus 553 ~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~ 632 (1351)
T KOG1035|consen 553 LTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSN 632 (1351)
T ss_pred cccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccc
Confidence
Q ss_pred ------------------------------------CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHH
Q 003296 628 ------------------------------------DSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLA 671 (833)
Q Consensus 628 ------------------------------------~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ 671 (833)
-.+||=||||+.-.++++++...... .-...++++++|++||+
T Consensus 633 tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~~wrLFreIlEGLa 711 (1351)
T KOG1035|consen 633 TSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDEAWRLFREILEGLA 711 (1351)
T ss_pred ccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHHHHHHHHHHHHHHH
Confidence 01478899999988888887522111 35567889999999999
Q ss_pred hhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeC----------------CCCCCCcccccccccccccccccc
Q 003296 672 FLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID----------------PSKSTGSLSTVAGSVGYIPPEYAY 735 (833)
Q Consensus 672 ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~----------------~~~~~~~~~~~~gt~~y~aPE~~~ 735 (833)
|+| +.+||||||||.||++|++..+||+|||+|.... .+......++.+||.-|+|||++.
T Consensus 712 YIH---~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~ 788 (1351)
T KOG1035|consen 712 YIH---DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLS 788 (1351)
T ss_pred HHH---hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhc
Confidence 999 7889999999999999999999999999998721 011112345689999999999987
Q ss_pred CC---cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchhHHHHHHHHHHHHHhcc
Q 003296 736 TM---RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACV 812 (833)
Q Consensus 736 ~~---~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl 812 (833)
+. +|+.|+|+||+|||++||+. ||....+.+..+.. ... ..++.+...+...+..-..++.+++
T Consensus 789 ~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~-LR~---------g~iP~~~~f~~~~~~~e~slI~~Ll 855 (1351)
T KOG1035|consen 789 DTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTN-LRK---------GSIPEPADFFDPEHPEEASLIRWLL 855 (1351)
T ss_pred ccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHh-ccc---------CCCCCCcccccccchHHHHHHHHHh
Confidence 54 49999999999999999984 67655444333222 221 1222221122344555678999999
Q ss_pred CCCCCCCCCHHHHHH
Q 003296 813 SVSPEARPKMKSVLR 827 (833)
Q Consensus 813 ~~dP~~Rps~~evl~ 827 (833)
+.||.+|||+.|++.
T Consensus 856 ~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 856 SHDPSKRPTATELLN 870 (1351)
T ss_pred cCCCccCCCHHHHhh
Confidence 999999999999986
No 327
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=1.2e-36 Score=323.69 Aligned_cols=245 Identities=14% Similarity=0.239 Sum_probs=196.7
Q ss_pred ccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEeeCC
Q 003296 560 LNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAP 638 (833)
Q Consensus 560 ~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey~~ 638 (833)
...||+|+||.||+|.. .+|..||||++.... ....+.+.+|+.++++++||||+++++++...+..++||||++
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 100 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 100 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc----hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCC
Confidence 36799999999999987 589999999984221 2235679999999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCc
Q 003296 639 KGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGS 718 (833)
Q Consensus 639 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~ 718 (833)
+++|.+++.. ..+++.....++.|++.|++||| +.+++||||||+||++++++.++++|||++........ .
T Consensus 101 ~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH---~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~--~ 172 (292)
T cd06657 101 GGALTDIVTH---TRMNEEQIAAVCLAVLKALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--R 172 (292)
T ss_pred CCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEcccccceecccccc--c
Confidence 9999998864 35899999999999999999999 78999999999999999999999999999876543221 1
Q ss_pred cccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchhHH
Q 003296 719 LSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVR 798 (833)
Q Consensus 719 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (833)
.....|+++|+|||+..+..++.++|||||||++|||++|+.||........ ....... . ...... ..
T Consensus 173 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~-~~~~~~~---~----~~~~~~----~~ 240 (292)
T cd06657 173 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA-MKMIRDN---L----PPKLKN----LH 240 (292)
T ss_pred ccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhh---C----CcccCC----cc
Confidence 1345789999999998888889999999999999999999999975433211 1111000 0 000000 01
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 799 SQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 799 ~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.....+.+++.+||+.||.+||++.|++++
T Consensus 241 ~~~~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 241 KVSPSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred cCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 223456789999999999999999999874
No 328
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=1.9e-36 Score=320.00 Aligned_cols=244 Identities=18% Similarity=0.183 Sum_probs=188.3
Q ss_pred ccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHH---HHhcCCCCCcccceEEEecCCceEEEEeeC
Q 003296 562 VELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELE---VLGKLSNSNVMTPLAYVLASDSAYLFYEYA 637 (833)
Q Consensus 562 ~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~---~l~~l~H~niv~~~~~~~~~~~~~lv~ey~ 637 (833)
+||+|+||.||+|.. .+|+.||+|.+..+ ..........+..|.. .++..+||+|+++++++..++..++||||+
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 79 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKK-RIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLM 79 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeecc-ccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecC
Confidence 489999999999987 46899999998432 1111112223444544 444567999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCC
Q 003296 638 PKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG 717 (833)
Q Consensus 638 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~ 717 (833)
++|+|.+++.. ...++|..+..++.|+++|++||| +.+|+||||||+||++++++.+|++|||+++......
T Consensus 80 ~g~~L~~~l~~--~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~--- 151 (278)
T cd05606 80 NGGDLHYHLSQ--HGVFSEAEMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--- 151 (278)
T ss_pred CCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC---
Confidence 99999999875 346999999999999999999999 7889999999999999999999999999987553222
Q ss_pred ccccccccccccccccccCC-cccccCcchhhHHHHHHHHhCCCcccCCccHHH-HHHHhhcccccccccccccccCCch
Q 003296 718 SLSTVAGSVGYIPPEYAYTM-RVTMAGNVYSFGVILLELLTGKTAVNQGNELAK-WVLRNSAQQDKLDHILDFNVSRTSL 795 (833)
Q Consensus 718 ~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (833)
.....|+..|+|||++.++ .++.++||||+||++|||++|+.||.+...... ....... .....+.
T Consensus 152 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-------~~~~~~~---- 219 (278)
T cd05606 152 -PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL-------TMAVELP---- 219 (278)
T ss_pred -CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhh-------ccCCCCC----
Confidence 1345799999999998754 689999999999999999999999975422111 1100000 0011111
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 003296 796 AVRSQMLTVLKVAVACVSVSPEARP-----KMKSVLRM 828 (833)
Q Consensus 796 ~~~~~~~~~~~l~~~cl~~dP~~Rp-----s~~evl~~ 828 (833)
...+.++.+++.+|+..+|++|| ++.|++++
T Consensus 220 --~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 220 --DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred --CcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 11245788999999999999999 99999865
No 329
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=4.8e-36 Score=324.89 Aligned_cols=261 Identities=13% Similarity=0.189 Sum_probs=194.3
Q ss_pred cccccC--cccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEeeC
Q 003296 561 NVELKT--RFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYA 637 (833)
Q Consensus 561 ~~ig~g--~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey~ 637 (833)
..||+| +||+||+|+. .+|+.||||++...... ....+.+.+|+.+++.++|||||+++++|..++..++||||+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~ 81 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCT--EEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFM 81 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecc
Confidence 356666 9999999997 48999999998422211 123467899999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCC
Q 003296 638 PKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG 717 (833)
Q Consensus 638 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~ 717 (833)
++|++.+++.......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+|++||+.+..........
T Consensus 82 ~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~ 158 (328)
T cd08226 82 AYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLH---QNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKA 158 (328)
T ss_pred cCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccc
Confidence 9999999998654456899999999999999999999 7899999999999999999999999998653322111100
Q ss_pred -----ccccccccccccccccccCC--cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccc--------
Q 003296 718 -----SLSTVAGSVGYIPPEYAYTM--RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKL-------- 782 (833)
Q Consensus 718 -----~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~-------- 782 (833)
......++..|||||++.+. .++.++|||||||++|||++|+.||....................
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (328)
T cd08226 159 KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPC 238 (328)
T ss_pred cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccch
Confidence 00112456779999998763 478999999999999999999999975432221111110000000
Q ss_pred -----------------c---------ccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 783 -----------------D---------HILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 783 -----------------~---------~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
. .+.+.... ..........+.+++.+||+.||++|||+.|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 239 EESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLR--TPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred hhhhhccchhhhhcccccchhcccccccccccccc--chhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 0 00000000 11123456678999999999999999999999875
No 330
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=6.9e-36 Score=317.59 Aligned_cols=263 Identities=19% Similarity=0.202 Sum_probs=199.4
Q ss_pred cCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcC---CCCCcccceEEEecCCc---
Q 003296 557 ANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL---SNSNVMTPLAYVLASDS--- 629 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l---~H~niv~~~~~~~~~~~--- 629 (833)
|+..+.||+|+||.||+|+.. +|+.||||+++.... .......+.+|+++++++ +||||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~ 78 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS--EEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRE 78 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccc--cchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCC
Confidence 456789999999999999986 589999999952221 222345677888887666 59999999999998776
Q ss_pred --eEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceee
Q 003296 630 --AYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELC 707 (833)
Q Consensus 630 --~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~ 707 (833)
.+++|||++ ++|.+++.......++|..+..++.|+++||+||| +.+++|+||||+||+++.++.+|++|||++
T Consensus 79 ~~~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH---~~~i~h~~l~~~nili~~~~~~~l~dfg~~ 154 (287)
T cd07838 79 LKLTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLH---SHRIVHRDLKPQNILVTSDGQVKIADFGLA 154 (287)
T ss_pred ceeEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhEEEccCCCEEEeccCcc
Confidence 999999997 48999887654446899999999999999999999 788999999999999999999999999999
Q ss_pred eeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhc--cccc---c
Q 003296 708 KVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSA--QQDK---L 782 (833)
Q Consensus 708 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~--~~~~---~ 782 (833)
........ .....++..|+|||++.+..++.++|||||||++|||++|++||.+............. .... .
T Consensus 155 ~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd07838 155 RIYSFEMA---LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWP 231 (287)
T ss_pred eeccCCcc---cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcC
Confidence 87643321 13346889999999999888999999999999999999999999754432221111100 0000 0
Q ss_pred ------cccccccccC-CchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 783 ------DHILDFNVSR-TSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 783 ------~~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.......... ...........+.+++.+||+.||++||++.|++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 232 RNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred CCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 0000000000 011112345677899999999999999999999864
No 331
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=2.1e-36 Score=326.44 Aligned_cols=267 Identities=21% Similarity=0.267 Sum_probs=196.6
Q ss_pred cCCccccccCcccEEEEEEcC---CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecC--CceE
Q 003296 557 ANPLNVELKTRFSTYYKAVMP---SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS--DSAY 631 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~--~~~~ 631 (833)
|+..+.||+|+||.||+|+.. +|..||+|.+... ........+.+.+|++++++++||||+++++++... +..+
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~-~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGD-KEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccc-cccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 667788999999999999974 5899999999532 112223346788999999999999999999999988 7899
Q ss_pred EEEeeCCCCChhhhhhcCC---CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCC----CCCceeccc
Q 003296 632 LFYEYAPKGTLFDVLHGCL---ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKS----LKEPQIGDI 704 (833)
Q Consensus 632 lv~ey~~~g~L~~~l~~~~---~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~----~~~~ki~df 704 (833)
+||||+++ ++.+++.... ...+++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+|++||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLH---SNWVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999975 7777765322 236889999999999999999999 788999999999999999 899999999
Q ss_pred eeeeeeCCCCC-CCccccccccccccccccccCC-cccccCcchhhHHHHHHHHhCCCcccCCccHH------------H
Q 003296 705 ELCKVIDPSKS-TGSLSTVAGSVGYIPPEYAYTM-RVTMAGNVYSFGVILLELLTGKTAVNQGNELA------------K 770 (833)
Q Consensus 705 gl~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~------------~ 770 (833)
|+++....... ........||+.|+|||++.+. .++.++|||||||++|||++|+.||.+..... .
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99987643322 1122345789999999987664 57899999999999999999999997432211 0
Q ss_pred HHHHhhccc----------ccccc----cccccccCCchhH-----HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 771 WVLRNSAQQ----------DKLDH----ILDFNVSRTSLAV-----RSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 771 ~~~~~~~~~----------~~~~~----~~~~~~~~~~~~~-----~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.+....... ..... ............. .....++.+++.+|++.||++|||+.|++++
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 000000000 00000 0000000000000 0234568899999999999999999999864
No 332
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=6.1e-36 Score=322.37 Aligned_cols=261 Identities=13% Similarity=0.149 Sum_probs=193.5
Q ss_pred ccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEeeCCCCC
Q 003296 562 VELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGT 641 (833)
Q Consensus 562 ~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey~~~g~ 641 (833)
..|.|+++.||++.. +|+.||||++.... ......+.+.+|++++++++||||+++++++..++..+++|||+++|+
T Consensus 9 ~~~~~~~v~~~~~~~-~~~~~avK~~~~~~--~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~ 85 (314)
T cd08216 9 CFEDLMIVHLAKHKP-TNTLVAVKKINLDS--CSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS 85 (314)
T ss_pred hhcCCceEEEEEecC-CCCEEEEEEEeccc--cchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence 344555555566555 79999999985321 122345689999999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCC-----
Q 003296 642 LFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKST----- 716 (833)
Q Consensus 642 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~----- 716 (833)
|.++++......+++.....++.|+++||+||| +.+|+||||||+||+++.++.+|++|||.+.........
T Consensus 86 l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH---~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~ 162 (314)
T cd08216 86 CEDLLKTHFPEGLPELAIAFILKDVLNALDYIH---SKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVH 162 (314)
T ss_pred HHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccc
Confidence 999998654456889999999999999999999 789999999999999999999999999998765322111
Q ss_pred CccccccccccccccccccC--CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccc-c------------
Q 003296 717 GSLSTVAGSVGYIPPEYAYT--MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQD-K------------ 781 (833)
Q Consensus 717 ~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~-~------------ 781 (833)
.......++..|+|||++.+ ..++.++|||||||++|||++|+.||.................. .
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
T cd08216 163 DFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDS 242 (314)
T ss_pred cccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCC
Confidence 11133567889999999875 35889999999999999999999999754432222111100000 0
Q ss_pred ccc----ccccccc--CCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 782 LDH----ILDFNVS--RTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 782 ~~~----~~~~~~~--~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
... ..++... ...........++.+++.+||+.||++|||++|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 243 MSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred cCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 000 0000000 0011112334678899999999999999999999875
No 333
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=3.6e-36 Score=319.29 Aligned_cols=264 Identities=18% Similarity=0.242 Sum_probs=199.9
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
+|+..+.||+|++|.||+|+.. +|..||||+++... .....+.+.+|++++++++||||+++++++...+..++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 77 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDA---EEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVF 77 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccc---cccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEE
Confidence 3677889999999999999975 78999999984221 1223467889999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 635 EYAPKGTLFDVLHGCL-ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
||+++ +|.+++.... ...+++..+..++.|++.||+||| ..+++||||||+||++++++.+|++|||+++.....
T Consensus 78 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~ 153 (284)
T cd07836 78 EYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCH---ENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIP 153 (284)
T ss_pred ecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCC
Confidence 99985 8999886533 246899999999999999999999 778999999999999999999999999999765332
Q ss_pred CCCCccccccccccccccccccCC-cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhc--c--ccccccc---
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTM-RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSA--Q--QDKLDHI--- 785 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~--~--~~~~~~~--- 785 (833)
.. ......+|..|+|||++.+. .++.++|||||||++|||++|+.||.+............. . ......+
T Consensus 154 ~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (284)
T cd07836 154 VN--TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQL 231 (284)
T ss_pred cc--ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcC
Confidence 21 11345678999999988654 4789999999999999999999999765432221111000 0 0000000
Q ss_pred --ccccccCCc-----hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 786 --LDFNVSRTS-----LAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 786 --~~~~~~~~~-----~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
......... .........+.+++.+|++.||.+||++.|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 232 PEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred chhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 000000000 0011234578899999999999999999999864
No 334
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=2.8e-36 Score=316.04 Aligned_cols=245 Identities=18% Similarity=0.249 Sum_probs=196.7
Q ss_pred cccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEeeCCCCC
Q 003296 563 ELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGT 641 (833)
Q Consensus 563 ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey~~~g~ 641 (833)
||.|+||.||+|+.. +++.||+|++... ........+.+.+|++++++++||||+++++++.+++..++||||+++|+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~-~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKR-HIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGE 79 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehh-cchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCc
Confidence 689999999999975 5899999998422 22222345689999999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCcccc
Q 003296 642 LFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLST 721 (833)
Q Consensus 642 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~~~~ 721 (833)
|.+++.+ ...+++..+..++.|++.||+|+| +.+++|+||||+||+++.++.+|++|||+++...... ....
T Consensus 80 L~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lH---~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---~~~~ 151 (262)
T cd05572 80 LWTILRD--RGLFDEYTARFYIACVVLAFEYLH---NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KTWT 151 (262)
T ss_pred HHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc---cccc
Confidence 9999986 345899999999999999999999 7899999999999999999999999999998764332 1134
Q ss_pred ccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCcc-HHHHHHHhhcccccccccccccccCCchhHHHH
Q 003296 722 VAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNE-LAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQ 800 (833)
Q Consensus 722 ~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (833)
..|++.|+|||++.+..++.++|+||+||++|||++|+.||..... ............. ....+ ...
T Consensus 152 ~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~------~~~~~------~~~ 219 (262)
T cd05572 152 FCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNG------KLEFP------NYI 219 (262)
T ss_pred ccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCC------CCCCC------ccc
Confidence 5789999999998888899999999999999999999999975442 1222211110000 00000 112
Q ss_pred HHHHHHHHHhccCCCCCCCCC-----HHHHHHH
Q 003296 801 MLTVLKVAVACVSVSPEARPK-----MKSVLRM 828 (833)
Q Consensus 801 ~~~~~~l~~~cl~~dP~~Rps-----~~evl~~ 828 (833)
..++.+++.+||+.+|++||+ ++|++++
T Consensus 220 ~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~ 252 (262)
T cd05572 220 DKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKH 252 (262)
T ss_pred CHHHHHHHHHHccCChhhCcCCcccCHHHHhcC
Confidence 457889999999999999999 7777653
No 335
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-37 Score=301.18 Aligned_cols=259 Identities=19% Similarity=0.237 Sum_probs=203.7
Q ss_pred cccccCcccEEEEEE-cCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCC-CCCcccceEEEecCCceEEEEeeCC
Q 003296 561 NVELKTRFSTYYKAV-MPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLS-NSNVMTPLAYVLASDSAYLFYEYAP 638 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~~~~lv~ey~~ 638 (833)
+++|+|+|+.|-.|+ ..+|.+||||++.+. ....+.+..+|++++.+.+ |+||++++++|+++..+|||||-|.
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq----~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~ 159 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ----PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMR 159 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcC----CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEeccc
Confidence 689999999999998 479999999999422 2345678999999999996 9999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCC---CceeccceeeeeeCCC--
Q 003296 639 KGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLK---EPQIGDIELCKVIDPS-- 713 (833)
Q Consensus 639 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~---~~ki~dfgl~~~~~~~-- 713 (833)
||+|.+++++ ...+++.++.++..+||.||.||| ..+|.|||+||+|||-.+-. -+||+||.+..-+...
T Consensus 160 GGplLshI~~--~~~F~E~EAs~vvkdia~aLdFlH---~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~ 234 (463)
T KOG0607|consen 160 GGPLLSHIQK--RKHFNEREASRVVKDIASALDFLH---TKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNND 234 (463)
T ss_pred CchHHHHHHH--hhhccHHHHHHHHHHHHHHHHHHh---hcCcccccCCccceeecCCCCcCceeeeccccccccccCCC
Confidence 9999999987 456899999999999999999999 89999999999999996544 3699999886543211
Q ss_pred ---CCCCcccccccccccccccccc-----CCcccccCcchhhHHHHHHHHhCCCcccCCcc-HHHHHHHhh---ccccc
Q 003296 714 ---KSTGSLSTVAGSVGYIPPEYAY-----TMRVTMAGNVYSFGVILLELLTGKTAVNQGNE-LAKWVLRNS---AQQDK 781 (833)
Q Consensus 714 ---~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~-~~~~~~~~~---~~~~~ 781 (833)
..+....+.+|+..|||||+.. ...|+.++|.||+|||+|-|++|.+||.+... ..-|-.... .+..-
T Consensus 235 ~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~L 314 (463)
T KOG0607|consen 235 CSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKL 314 (463)
T ss_pred CCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHH
Confidence 1122345678999999999753 34589999999999999999999999974322 111210000 00011
Q ss_pred ccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 782 LDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.+.+-+..+..+..++...+.+..+++...+..||.+|.++.+++.+
T Consensus 315 FesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnh 361 (463)
T KOG0607|consen 315 FESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNH 361 (463)
T ss_pred HHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCC
Confidence 22222333344455667788899999999999999999999998863
No 336
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=5.7e-36 Score=322.09 Aligned_cols=267 Identities=17% Similarity=0.216 Sum_probs=196.5
Q ss_pred HhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCC-----
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD----- 628 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~----- 628 (833)
+.|+..+.||+|+||.||+|... +|+.||||++.... ........+.+|++++++++||||++++++|...+
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMEN--EKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccC--CcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 46888899999999999999974 79999999984221 11222345678999999999999999999987654
Q ss_pred ---ceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccce
Q 003296 629 ---SAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIE 705 (833)
Q Consensus 629 ---~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfg 705 (833)
..++||||+. ++|.+++... ...+++.++..++.|+++||+||| ..+++||||||+||+++.++.+|++|||
T Consensus 90 ~~~~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg 164 (310)
T cd07865 90 YKGSFYLVFEFCE-HDLAGLLSNK-NVKFTLSEIKKVMKMLLNGLYYIH---RNKILHRDMKAANILITKDGILKLADFG 164 (310)
T ss_pred CCceEEEEEcCCC-cCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEECCCCcEEECcCC
Confidence 3599999996 4888888753 236899999999999999999999 7789999999999999999999999999
Q ss_pred eeeeeCCCCCC--CccccccccccccccccccCC-cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccc
Q 003296 706 LCKVIDPSKST--GSLSTVAGSVGYIPPEYAYTM-RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKL 782 (833)
Q Consensus 706 l~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 782 (833)
++......... .......++..|+|||++.+. .++.++|||||||++|||+||+.||................+...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (310)
T cd07865 165 LARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSIT 244 (310)
T ss_pred CcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 99866432211 112345678899999987654 378899999999999999999999975543322111100000000
Q ss_pred ccc---------cc-ccccCCch-hHH------HHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 783 DHI---------LD-FNVSRTSL-AVR------SQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 783 ~~~---------~~-~~~~~~~~-~~~------~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
..+ .+ ........ ... .....+.+++.+||..||++|||++|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 245 PEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred hhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 000 00 00000000 000 012456789999999999999999999875
No 337
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=5.1e-37 Score=298.54 Aligned_cols=267 Identities=21% Similarity=0.241 Sum_probs=199.5
Q ss_pred HhcCCccccccCcccEEEEEEcCC-----CceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEec-CC
Q 003296 555 AVANPLNVELKTRFSTYYKAVMPS-----GMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLA-SD 628 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~-~~ 628 (833)
..|+....||+|.||.||||+..+ .+.+|+|+++..++ ..+......||+.+++.++|||||.+..++.. +.
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd--~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKD--GTGISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCC--CCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 467888999999999999997532 34799999953221 23445678999999999999999999999987 77
Q ss_pred ceEEEEeeCCCCChhhhhhcCC---CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCC----CCcee
Q 003296 629 SAYLFYEYAPKGTLFDVLHGCL---ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSL----KEPQI 701 (833)
Q Consensus 629 ~~~lv~ey~~~g~L~~~l~~~~---~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~----~~~ki 701 (833)
.+++++||++. ||.++++-.+ ...++-...+.|..||+.|+.||| ++-|+|||+||+|||+..+ |.+||
T Consensus 102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH---~NWvlHRDLKPaNIlvmgdgperG~VKI 177 (438)
T KOG0666|consen 102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLH---SNWVLHRDLKPANILVMGDGPERGRVKI 177 (438)
T ss_pred eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHh---hhheeeccCCcceEEEeccCCccCeeEe
Confidence 89999999988 9999987432 236888999999999999999999 7789999999999999877 89999
Q ss_pred ccceeeeeeCCCCCCC-ccccccccccccccccccCCc-ccccCcchhhHHHHHHHHhCCCcccCCcc---------HHH
Q 003296 702 GDIELCKVIDPSKSTG-SLSTVAGSVGYIPPEYAYTMR-VTMAGNVYSFGVILLELLTGKTAVNQGNE---------LAK 770 (833)
Q Consensus 702 ~dfgl~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~S~Gvvl~elltg~~p~~~~~~---------~~~ 770 (833)
+|+|+++.....-... ....++-|..|.|||.+.+.+ |+.+.||||.|||+.||+|-++-|.+... ..+
T Consensus 178 aDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQ 257 (438)
T KOG0666|consen 178 ADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQ 257 (438)
T ss_pred ecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHH
Confidence 9999999876443322 334577899999999998765 99999999999999999999888863221 011
Q ss_pred HHHHhhcccccccccccccccCCchh-----------------------HHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 003296 771 WVLRNSAQQDKLDHILDFNVSRTSLA-----------------------VRSQMLTVLKVAVACVSVSPEARPKMKSVLR 827 (833)
Q Consensus 771 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~ 827 (833)
..+....- +....-..+.+...+.. .........+++.++|..||-+|.|++|.++
T Consensus 258 l~rIf~vL-G~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAle 336 (438)
T KOG0666|consen 258 LDRIFEVL-GTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALE 336 (438)
T ss_pred HHHHHHHc-CCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhc
Confidence 11100000 00000001111000000 0001234789999999999999999999987
Q ss_pred H
Q 003296 828 M 828 (833)
Q Consensus 828 ~ 828 (833)
+
T Consensus 337 h 337 (438)
T KOG0666|consen 337 H 337 (438)
T ss_pred c
Confidence 6
No 338
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-37 Score=325.56 Aligned_cols=248 Identities=20% Similarity=0.325 Sum_probs=200.2
Q ss_pred ccccccCcccEEEEEEcC--CC--ceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEe
Q 003296 560 LNVELKTRFSTYYKAVMP--SG--MSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYE 635 (833)
Q Consensus 560 ~~~ig~g~~g~vy~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 635 (833)
.++||+|.||.|++|.+. .| ..||||+++.. ... ....+|.+|+.+|-+++|||+|++||...+ ....+|||
T Consensus 115 ~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d-~l~--~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~E 190 (1039)
T KOG0199|consen 115 YELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDD-SLN--AIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFE 190 (1039)
T ss_pred HHHhcCcceeeEeeccccCCCCcEEeEEEEeccCC-ccc--hhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhh
Confidence 468999999999999974 44 46899999532 221 256789999999999999999999999987 67899999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCC
Q 003296 636 YAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715 (833)
Q Consensus 636 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~ 715 (833)
.++.|+|.+.|++.....+--.....++.|||.|+.||. ..+.||||+...|+|+-....+||+|||+.+.+...+.
T Consensus 191 LaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLe---skrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned 267 (1039)
T KOG0199|consen 191 LAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLE---SKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENED 267 (1039)
T ss_pred hcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhhhheecccceeeeecccceeccCCCCc
Confidence 999999999999855667888888999999999999999 88999999999999999999999999999998865543
Q ss_pred CCccc-cccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccccccccccccCC
Q 003296 716 TGSLS-TVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRT 793 (833)
Q Consensus 716 ~~~~~-~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (833)
.-.+. ...-...|.|||.+...+++.++|||+|||++|||+| |+.||.+..... +.....+++.+ .+
T Consensus 268 ~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~q--IL~~iD~~erL--------pR- 336 (1039)
T KOG0199|consen 268 MYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQ--ILKNIDAGERL--------PR- 336 (1039)
T ss_pred ceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHH--HHHhccccccC--------CC-
Confidence 21111 1122457999999999999999999999999999998 688997654432 11111121211 11
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 794 SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 794 ~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
...++.++.+++..||+..|++|||+..|.+.
T Consensus 337 ---Pk~csedIY~imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 337 ---PKYCSEDIYQIMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred ---CCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence 12456788999999999999999999999744
No 339
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=7.4e-36 Score=319.90 Aligned_cols=269 Identities=20% Similarity=0.239 Sum_probs=201.3
Q ss_pred HHHHhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCC--
Q 003296 552 AMEAVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD-- 628 (833)
Q Consensus 552 ~~~~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~-- 628 (833)
...++|+..+.+|+|+||.||+|... +|+.||||+++... ........+.+|++++++++||||+++++++.+.+
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~ 81 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDN--EKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDA 81 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecc--cccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchh
Confidence 45678889999999999999999985 68999999985321 12223457889999999999999999999997655
Q ss_pred --------ceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCce
Q 003296 629 --------SAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQ 700 (833)
Q Consensus 629 --------~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~k 700 (833)
..++|+||+++ ++.+.+... ...+++..+..++.|++.||+||| ..+|+||||||+||++++++.+|
T Consensus 82 ~~~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~k 156 (302)
T cd07864 82 LDFKKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCH---KKNFLHRDIKCSNILLNNKGQIK 156 (302)
T ss_pred hhccccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCcEE
Confidence 78999999986 777777653 346899999999999999999999 78999999999999999999999
Q ss_pred eccceeeeeeCCCCCCCccccccccccccccccccC-CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccc
Q 003296 701 IGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQ 779 (833)
Q Consensus 701 i~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 779 (833)
++|||++......... ......++..|+|||++.+ ..++.++|||||||++|||++|++||.................
T Consensus 157 l~dfg~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~ 235 (302)
T cd07864 157 LADFGLARLYNSEESR-PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCG 235 (302)
T ss_pred eCcccccccccCCccc-ccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence 9999999876433211 1123456889999998764 3578999999999999999999999975543322211111000
Q ss_pred cc----cccccccccc-----------CCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 780 DK----LDHILDFNVS-----------RTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 780 ~~----~~~~~~~~~~-----------~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.. ...+...... .........+..+.+++.+||+.||++||++.|++.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 236 SPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred CCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00 0000000000 0000011234578899999999999999999999864
No 340
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.3e-35 Score=308.83 Aligned_cols=250 Identities=22% Similarity=0.314 Sum_probs=203.7
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
+|+..+.||+|++|.||+|... +|..||+|++..... ...+.+.+|++++++++||||+++++++...+..++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~ 76 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK----EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVM 76 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence 3667789999999999999985 789999999943221 24578999999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
||+++++|.+++.... ..+++..+..++.|++.|++||| ..+++||||+|+||++++++.+||+|||.+.......
T Consensus 77 e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 152 (253)
T cd05122 77 EFCSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLH---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTK 152 (253)
T ss_pred ecCCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhh---cCCEecCCCCHHHEEEccCCeEEEeeccccccccccc
Confidence 9999999999987632 46899999999999999999999 7899999999999999999999999999988765432
Q ss_pred CCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCc
Q 003296 715 STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTS 794 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (833)
. .....|+..|+|||++.+..++.++|||||||++|||++|+.||.............. .......+
T Consensus 153 ~---~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~~~~------- 219 (253)
T cd05122 153 A---RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT---NGPPGLRN------- 219 (253)
T ss_pred c---ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh---cCCCCcCc-------
Confidence 1 2346789999999999888899999999999999999999999975433222111111 00011100
Q ss_pred hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 795 LAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 795 ~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
......++.+++.+||+.||++|||+.|++++
T Consensus 220 --~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 220 --PEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred --ccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00113568899999999999999999999875
No 341
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=3.5e-36 Score=320.35 Aligned_cols=252 Identities=18% Similarity=0.199 Sum_probs=197.0
Q ss_pred cCCccccccCcccEEEEEEc----CCCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEecCCceE
Q 003296 557 ANPLNVELKTRFSTYYKAVM----PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVLASDSAY 631 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~ 631 (833)
|+..+.||+|+||.||+|.. .+|..||+|++............+++.+|+++++++ +||||+++++++..+...|
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH 81 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence 56778999999999999986 378999999985322222233456789999999999 5999999999999999999
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeC
Q 003296 632 LFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711 (833)
Q Consensus 632 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~ 711 (833)
+||||+++|+|.+++.. ...+++.+...++.|+++||+||| +.+++||||||+||++++++.+|++|||+++...
T Consensus 82 lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 156 (290)
T cd05613 82 LILDYINGGELFTHLSQ--RERFKEQEVQIYSGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFH 156 (290)
T ss_pred EEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEECCCCCEEEeeCccceecc
Confidence 99999999999999975 346889999999999999999999 7899999999999999999999999999998754
Q ss_pred CCCCCCccccccccccccccccccCC--cccccCcchhhHHHHHHHHhCCCcccCCcc---HHHHHHHhhcccccccccc
Q 003296 712 PSKSTGSLSTVAGSVGYIPPEYAYTM--RVTMAGNVYSFGVILLELLTGKTAVNQGNE---LAKWVLRNSAQQDKLDHIL 786 (833)
Q Consensus 712 ~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~---~~~~~~~~~~~~~~~~~~~ 786 (833)
..... ......|+..|+|||++.+. .++.++|||||||++|||++|+.||..... ...+........
T Consensus 157 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~------- 228 (290)
T cd05613 157 EDEVE-RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE------- 228 (290)
T ss_pred ccccc-ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccC-------
Confidence 32211 22346789999999998753 467899999999999999999999963221 111111111100
Q ss_pred cccccCCchhHHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 003296 787 DFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARP-----KMKSVLRM 828 (833)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp-----s~~evl~~ 828 (833)
+.. .......+.+++.+||+.||++|| ++++++.+
T Consensus 229 -~~~------~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 229 -PPY------PQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred -CCC------CccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 000 011234677899999999999997 77777664
No 342
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=8.9e-36 Score=311.87 Aligned_cols=244 Identities=16% Similarity=0.161 Sum_probs=188.5
Q ss_pred cccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHH-hcCCCCCcccceEEEecCCceEEEEeeCC
Q 003296 561 NVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVL-GKLSNSNVMTPLAYVLASDSAYLFYEYAP 638 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l-~~l~H~niv~~~~~~~~~~~~~lv~ey~~ 638 (833)
+.+|+|+||.||+|.. .+|+.||||.+..... ........+..|..++ ...+||||+++++++...+..|+||||++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDM-IAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLN 80 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhh-hHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccC
Confidence 4689999999999997 4789999999842221 1112233455665554 45589999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCc
Q 003296 639 KGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGS 718 (833)
Q Consensus 639 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~ 718 (833)
+|+|.+++.. ...+++..+..++.|++.||.||| +.+++||||||+||++++++.+|++|||+++....
T Consensus 81 ~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------ 149 (260)
T cd05611 81 GGDCASLIKT--LGGLPEDWAKQYIAEVVLGVEDLH---QRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------ 149 (260)
T ss_pred CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEeecccceeccc------
Confidence 9999999975 346889999999999999999999 78999999999999999999999999999876432
Q ss_pred cccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchhHH
Q 003296 719 LSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVR 798 (833)
Q Consensus 719 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (833)
.....|++.|+|||+..+..++.++|||||||++|||++|+.||........+... ....... ......
T Consensus 150 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~~~~----------~~~~~~ 218 (260)
T cd05611 150 NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNI-LSRRINW----------PEEVKE 218 (260)
T ss_pred cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHH-HhcccCC----------CCcccc
Confidence 12356889999999998888899999999999999999999999754432222111 1100000 000011
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 003296 799 SQMLTVLKVAVACVSVSPEARPKMKSVLR 827 (833)
Q Consensus 799 ~~~~~~~~l~~~cl~~dP~~Rps~~evl~ 827 (833)
..+.++.+++.+||+.+|++||++.++.+
T Consensus 219 ~~~~~~~~~i~~~l~~~p~~R~~~~~~~~ 247 (260)
T cd05611 219 FCSPEAVDLINRLLCMDPAKRLGANGYQE 247 (260)
T ss_pred cCCHHHHHHHHHHccCCHHHccCCCcHHH
Confidence 23457889999999999999997754433
No 343
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-36 Score=328.33 Aligned_cols=197 Identities=23% Similarity=0.303 Sum_probs=170.3
Q ss_pred CccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecC------CceE
Q 003296 559 PLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS------DSAY 631 (833)
Q Consensus 559 ~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~------~~~~ 631 (833)
..+.+|+|+||.||+|+. .+|..||||.++.. .....++...+|+++|++++|||||++++.-.+. +...
T Consensus 17 ~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~---~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 17 MDERLGKGAFGNVYRGRNKETGRLVAVKTFNKE---SSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred ehhhhcCCccceeeeecccccccchhHHhhhhh---cccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 346899999999999995 68999999999522 2345567899999999999999999999876553 3579
Q ss_pred EEEeeCCCCChhhhhhcCCC-CCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeC--CCCC--ceecccee
Q 003296 632 LFYEYAPKGTLFDVLHGCLE-NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLK--SLKE--PQIGDIEL 706 (833)
Q Consensus 632 lv~ey~~~g~L~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~--~~~~--~ki~dfgl 706 (833)
+|||||++|||+.+|.+... ..+++.+.+.+..+++.||.||| .++||||||||.||++- ++|+ -|++|||.
T Consensus 94 lvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~Lr---En~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLR---ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred EEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHH---HcCceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 99999999999999986432 37999999999999999999999 88999999999999984 3343 59999999
Q ss_pred eeeeCCCCCCCcccccccccccccccccc-CCcccccCcchhhHHHHHHHHhCCCcccC
Q 003296 707 CKVIDPSKSTGSLSTVAGSVGYIPPEYAY-TMRVTMAGNVYSFGVILLELLTGKTAVNQ 764 (833)
Q Consensus 707 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~S~Gvvl~elltg~~p~~~ 764 (833)
||..+++. ...+++||+.|.|||++. ...|+.-+|.|||||++||.+||..||..
T Consensus 171 Arel~d~s---~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p 226 (732)
T KOG4250|consen 171 ARELDDNS---LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIP 226 (732)
T ss_pred cccCCCCC---eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCc
Confidence 99886554 456789999999999998 47899999999999999999999999974
No 344
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.2e-35 Score=315.18 Aligned_cols=263 Identities=18% Similarity=0.206 Sum_probs=203.1
Q ss_pred cCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEe
Q 003296 557 ANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYE 635 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 635 (833)
|+..+.||+|++|.||+|... +|+.+|+|++.... ........+.+|++++++++||||+++++++..++..++|||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 78 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRF--ESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFE 78 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEecccc--ccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEe
Confidence 456678999999999999974 78999999984322 122345678999999999999999999999999999999999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCC
Q 003296 636 YAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715 (833)
Q Consensus 636 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~ 715 (833)
|+++ ++.+++... ...+++.++..++.|+++||+||| ..+|+|+||||+||+++.++.+|++|||.+........
T Consensus 79 ~~~~-~l~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~ 153 (283)
T cd05118 79 FMDT-DLYKLIKDR-QRGLPESLIKSYLYQLLQGLAFCH---SHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVR 153 (283)
T ss_pred ccCC-CHHHHHHhh-cccCCHHHHHHHHHHHHHHHHHHH---HCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcc
Confidence 9975 898888753 246899999999999999999999 78899999999999999999999999999987654321
Q ss_pred CCccccccccccccccccccCC-cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccc----ccccccc---
Q 003296 716 TGSLSTVAGSVGYIPPEYAYTM-RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQD----KLDHILD--- 787 (833)
Q Consensus 716 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~--- 787 (833)
......++..|+|||.+.+. .++.++||||+||++|||+||+.||.................. ......+
T Consensus 154 --~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd05118 154 --PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLAR 231 (283)
T ss_pred --cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhh
Confidence 12335688899999998776 6899999999999999999999999765543332211110000 0000000
Q ss_pred --------ccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 788 --------FNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 788 --------~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
...............++.+++.+||+.||.+||+++|++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 232 NYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred hhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 00000011122345688999999999999999999999875
No 345
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=1e-35 Score=315.65 Aligned_cols=262 Identities=19% Similarity=0.253 Sum_probs=198.2
Q ss_pred cCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCC-CCCcccceEEEecCCceEEEE
Q 003296 557 ANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLS-NSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~~~~lv~ 634 (833)
|...+.||+|+||.||+|+.. +++.||||++..... ........+|+..+++++ ||||+++++++..++..++||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 77 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFY---SWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVF 77 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhcc---chhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEE
Confidence 456788999999999999985 688999999842211 112334567999999999 999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
||+ +|+|.+++.......++|.++..++.|+++||.||| +.+++|+||||+||++++++.++++|||+++......
T Consensus 78 e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (283)
T cd07830 78 EYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIH---KHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP 153 (283)
T ss_pred ecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCCEEEeecccceeccCCC
Confidence 999 889999998654457899999999999999999999 7899999999999999999999999999998764322
Q ss_pred CCCcccccccccccccccccc-CCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhh--cc--------ccccc
Q 003296 715 STGSLSTVAGSVGYIPPEYAY-TMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNS--AQ--------QDKLD 783 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~--~~--------~~~~~ 783 (833)
. .....|+..|+|||++. ...++.++|||||||++|||++|+.||.............. .. .....
T Consensus 154 ~---~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd07830 154 P---YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLA 230 (283)
T ss_pred C---cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhh
Confidence 1 13456889999999875 44578999999999999999999999975433222111000 00 00000
Q ss_pred ccccccccCCc-----hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 784 HILDFNVSRTS-----LAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 784 ~~~~~~~~~~~-----~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
...+....... .........+.+++.+||+.||++|||++|++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 231 SKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred ccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 00010100000 0001123578899999999999999999999864
No 346
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=1.5e-35 Score=309.68 Aligned_cols=253 Identities=19% Similarity=0.271 Sum_probs=205.0
Q ss_pred cCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecC--CceEEE
Q 003296 557 ANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS--DSAYLF 633 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~--~~~~lv 633 (833)
|...+.||+|++|.||+|+.. +|+.|++|++..... .....+.+.+|++++++++||||+++++++... +..++|
T Consensus 2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGD--SEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIF 79 (260)
T ss_pred ceeeeEeeecCceEEEEEEECCCCcEEEEEEeecccc--chHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEE
Confidence 566789999999999999976 799999999853221 123457899999999999999999999999988 889999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
|||+++++|.+++... ..++|..+..++.|++.|++||| +.+++|+|++|+||+++.++.+|++|||.+......
T Consensus 80 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh---~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 154 (260)
T cd06606 80 LEYVSGGSLSSLLKKF--GKLPEPVIRKYTRQILEGLAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDI 154 (260)
T ss_pred EEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEcccccEEecccc
Confidence 9999999999999863 37999999999999999999999 789999999999999999999999999999877544
Q ss_pred CCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCC
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRT 793 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (833)
..........++..|+|||...+..++.++|||||||++|||++|+.||............... ...... +
T Consensus 155 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~-----~--- 225 (260)
T cd06606 155 ETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGS-SGEPPE-----I--- 225 (260)
T ss_pred cccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccc-cCCCcC-----C---
Confidence 3211123467899999999998888999999999999999999999999765422221111110 000000 0
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 794 SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 794 ~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.......+.+++.+|++.||++||++.|++++
T Consensus 226 ---~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 226 ---PEHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred ---CcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 11224578899999999999999999999875
No 347
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-38 Score=301.08 Aligned_cols=251 Identities=17% Similarity=0.229 Sum_probs=196.2
Q ss_pred ccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEecCCceEEEEeeC
Q 003296 560 LNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVLASDSAYLFYEYA 637 (833)
Q Consensus 560 ~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~ey~ 637 (833)
...||.|+||+|+|... +.|+..|||++.... ...+++++..|.++..+- +.||||++||++..++..|+.||.|
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n---~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM 145 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNN---IEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM 145 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeecc---chHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH
Confidence 45799999999999987 589999999995221 234568899999875554 6899999999999999999999999
Q ss_pred CCCChhhhh---hcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 638 PKGTLFDVL---HGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 638 ~~g~L~~~l---~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
+- |+..+- +...+..+++.-.-.|+.-.+.||.||-. ...|||||+||+|||+|..|.+|++|||++..+..+-
T Consensus 146 d~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~Si 222 (361)
T KOG1006|consen 146 DI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKE--ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSI 222 (361)
T ss_pred hh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHH--HhhhhhccCChhheEEecCCCEeeecccchHhHHHHH
Confidence 65 665543 33334568888888899999999999986 5679999999999999999999999999997664332
Q ss_pred CCCccccccccccccccccccC--CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccC
Q 003296 715 STGSLSTVAGSVGYIPPEYAYT--MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSR 792 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 792 (833)
..+.-+|...|||||.+.. ..|+-+|||||+|++|||+.||+.|+.+.++..+.+........ .++.
T Consensus 223 ---AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdp---p~l~----- 291 (361)
T KOG1006|consen 223 ---AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDP---PILL----- 291 (361)
T ss_pred ---HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCC---Ceec-----
Confidence 1244678999999998863 34999999999999999999999999877665544433332211 1111
Q ss_pred CchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 003296 793 TSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLR 827 (833)
Q Consensus 793 ~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~ 827 (833)
......+....+..++..|+-+|-..||...++.+
T Consensus 292 ~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 292 FDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred CcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 11111235567889999999999999999998765
No 348
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=1.5e-35 Score=318.00 Aligned_cols=251 Identities=22% Similarity=0.287 Sum_probs=196.7
Q ss_pred HHhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEE
Q 003296 554 EAVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYL 632 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 632 (833)
.+.|+..+.+|+|+||.||+|... ++..||+|++..... ......+++.+|++++++++|||++++++++..++..++
T Consensus 14 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 92 (308)
T cd06634 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK-QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWL 92 (308)
T ss_pred HHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccc-cChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEE
Confidence 344666788999999999999974 788999999842211 111234578899999999999999999999999999999
Q ss_pred EEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCC
Q 003296 633 FYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDP 712 (833)
Q Consensus 633 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~ 712 (833)
||||+. |++.+++... ...+++.++..++.|++.|+.||| ..+++||||||+||+++.++.+|++|||++.....
T Consensus 93 v~e~~~-~~l~~~~~~~-~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 167 (308)
T cd06634 93 VMEYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 167 (308)
T ss_pred EEEccC-CCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHhEEECCCCcEEECCcccceeecC
Confidence 999996 6888877643 345899999999999999999999 78899999999999999999999999999876542
Q ss_pred CCCCCcccccccccccccccccc---CCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccccccccc
Q 003296 713 SKSTGSLSTVAGSVGYIPPEYAY---TMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFN 789 (833)
Q Consensus 713 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (833)
. ....|++.|+|||++. ...++.++|||||||++|||++|+.||....... ........ .. +.
T Consensus 168 ~------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~-~~------~~ 233 (308)
T cd06634 168 A------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQN-ES------PA 233 (308)
T ss_pred c------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH-HHHHHhhc-CC------CC
Confidence 2 2456899999999874 3467899999999999999999999986533211 11111100 00 00
Q ss_pred ccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 003296 790 VSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRML 829 (833)
Q Consensus 790 ~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L 829 (833)
. ........+.+++.+||+.+|++||++.+++++-
T Consensus 234 ~-----~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~ 268 (308)
T cd06634 234 L-----QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 268 (308)
T ss_pred c-----CcccccHHHHHHHHHHhhCCcccCCCHHHHhhCc
Confidence 0 0112345678999999999999999999998763
No 349
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.1e-35 Score=317.54 Aligned_cols=253 Identities=16% Similarity=0.240 Sum_probs=195.1
Q ss_pred HhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCC-CCCcccceEEEecCCceEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLS-NSNVMTPLAYVLASDSAYL 632 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~~~~l 632 (833)
++|+..+.||+|+||.||+|... +|+.||||+++.... ....+++.+|++++.+.. ||||++++++|......|+
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~---~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 91 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGN---KEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFI 91 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCC---hHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEE
Confidence 45677899999999999999986 499999999953211 123456778888777775 9999999999999999999
Q ss_pred EEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCC
Q 003296 633 FYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDP 712 (833)
Q Consensus 633 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~ 712 (833)
||||++ +++.++.... ...+++..+..++.|+++|++|||+ ..+|+||||||+||++++++.+||+|||++.....
T Consensus 92 v~e~~~-~~l~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~--~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~ 167 (296)
T cd06618 92 CMELMS-TCLDKLLKRI-QGPIPEDILGKMTVAIVKALHYLKE--KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVD 167 (296)
T ss_pred EeeccC-cCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh--hCCEecCCCcHHHEEEcCCCCEEECccccchhccC
Confidence 999985 4777776543 3478999999999999999999993 25899999999999999999999999999876543
Q ss_pred CCCCCccccccccccccccccccCCc----ccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccc
Q 003296 713 SKSTGSLSTVAGSVGYIPPEYAYTMR----VTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDF 788 (833)
Q Consensus 713 ~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (833)
... .....|+..|+|||++.+.. ++.++|||||||++|||++|+.||.......+........ . ..
T Consensus 168 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-~-~~----- 237 (296)
T cd06618 168 SKA---KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQE-E-PP----- 237 (296)
T ss_pred CCc---ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcC-C-CC-----
Confidence 221 12346888999999987553 7899999999999999999999997533222222111111 0 00
Q ss_pred cccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 789 NVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
..... .....++.+++.+||+.||++||++.+++++
T Consensus 238 ~~~~~----~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 238 SLPPN----EGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred CCCCC----CCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00000 0234568899999999999999999999875
No 350
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9e-37 Score=306.63 Aligned_cols=245 Identities=25% Similarity=0.260 Sum_probs=200.9
Q ss_pred HHhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEecCCceE
Q 003296 554 EAVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVLASDSAY 631 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~ 631 (833)
..+|....+||+|+||.|..|..+ +...+|||+++ ++-..+..+.+--..|-++|+-- +-|.+|+++.+|+.-+.+|
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLk-KDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLy 426 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILK-KDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLY 426 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhc-cceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhhee
Confidence 347888999999999999999875 56889999995 44444444555667788888776 4688999999999999999
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeC
Q 003296 632 LFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711 (833)
Q Consensus 632 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~ 711 (833)
.||||+.||||.-+++. -+.+.++.+..+|.+||-||-||| +.+||.||+|.+|||+|.+|++||+|||+++.--
T Consensus 427 FVMEyvnGGDLMyhiQQ--~GkFKEp~AvFYAaEiaigLFFLh---~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni 501 (683)
T KOG0696|consen 427 FVMEYVNGGDLMYHIQQ--VGKFKEPVAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 501 (683)
T ss_pred eEEEEecCchhhhHHHH--hcccCCchhhhhhHHHHHHhhhhh---cCCeeeeeccccceEeccCCceEeeecccccccc
Confidence 99999999999999886 345777888899999999999999 8999999999999999999999999999998654
Q ss_pred CCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccccccccccc
Q 003296 712 PSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVS 791 (833)
Q Consensus 712 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (833)
.... .+.++||||.|+|||++...+|+.++|+|||||+||||+.|++||+++++.. ... .+.+..+.
T Consensus 502 ~~~~--TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~e-lF~----------aI~ehnvs 568 (683)
T KOG0696|consen 502 FDGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE-LFQ----------AIMEHNVS 568 (683)
T ss_pred cCCc--ceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHH----------HHHHccCc
Confidence 3332 3467999999999999999999999999999999999999999998655422 111 12222222
Q ss_pred CCchhHHHHHHHHHHHHHhccCCCCCCCCC
Q 003296 792 RTSLAVRSQMLTVLKVAVACVSVSPEARPK 821 (833)
Q Consensus 792 ~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps 821 (833)
.+...+.++.+++...+.+.|.+|..
T Consensus 569 ----yPKslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 569 ----YPKSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred ----CcccccHHHHHHHHHHhhcCCccccC
Confidence 12345667888899999999999953
No 351
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=6e-36 Score=325.30 Aligned_cols=264 Identities=18% Similarity=0.204 Sum_probs=198.9
Q ss_pred HhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecC-----C
Q 003296 555 AVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS-----D 628 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~-----~ 628 (833)
+.|...+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|+.++++++||||+++++++... .
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAF--DNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccc--cccchhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence 4578889999999999999996 479999999984221 1222345678999999999999999999988754 3
Q ss_pred ceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeee
Q 003296 629 SAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCK 708 (833)
Q Consensus 629 ~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~ 708 (833)
..|+||||+. ++|.+++.. ...+++..+..++.|++.||.||| ..+++||||||+||+++.++.+|++|||+++
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~ 156 (337)
T cd07858 83 DVYIVYELMD-TDLHQIIRS--SQTLSDDHCQYFLYQLLRGLKYIH---SANVLHRDLKPSNLLLNANCDLKICDFGLAR 156 (337)
T ss_pred cEEEEEeCCC-CCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcCcccc
Confidence 4799999996 689998875 346899999999999999999999 7899999999999999999999999999998
Q ss_pred eeCCCCCCCccccccccccccccccccC-CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccc----cccc
Q 003296 709 VIDPSKSTGSLSTVAGSVGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQ----DKLD 783 (833)
Q Consensus 709 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~----~~~~ 783 (833)
...... .......||..|+|||++.. ..++.++|||||||++|||++|+.||.+..............+ ....
T Consensus 157 ~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (337)
T cd07858 157 TTSEKG--DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLG 234 (337)
T ss_pred ccCCCc--ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhh
Confidence 664322 12234578999999998764 4688999999999999999999999975432211110000000 0000
Q ss_pred ccccccc-------c---CC--chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 784 HILDFNV-------S---RT--SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 784 ~~~~~~~-------~---~~--~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.+.+... . .. .......+.++.+++.+||+.||++|||++|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 235 FIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred hcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 0000000 0 00 00011345678899999999999999999999987
No 352
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=4.1e-36 Score=319.43 Aligned_cols=254 Identities=18% Similarity=0.175 Sum_probs=199.0
Q ss_pred cCCccccccCcccEEEEEEc----CCCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEecCCceE
Q 003296 557 ANPLNVELKTRFSTYYKAVM----PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVLASDSAY 631 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~ 631 (833)
|+..+.||+|+||.||+|+. .++..||||.++...........+.+.+|++++.++ +||||+++++++..++..+
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~ 81 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH 81 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence 56678999999999999985 367899999985322222233456789999999999 5999999999999999999
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeC
Q 003296 632 LFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711 (833)
Q Consensus 632 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~ 711 (833)
+||||+++|+|.+++.. ...+++.....++.|+++||+||| ..+++||||||+||+++.++.++++|||+++...
T Consensus 82 lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lH---~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 156 (288)
T cd05583 82 LILDYVNGGELFTHLYQ--REHFTESEVRVYIAEIVLALDHLH---QLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (288)
T ss_pred EEEecCCCCcHHHHHhh--cCCcCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEEECccccccc
Confidence 99999999999999875 346889999999999999999999 7899999999999999999999999999987654
Q ss_pred CCCCCCccccccccccccccccccCCc--ccccCcchhhHHHHHHHHhCCCcccCCccHH---HHHHHhhcccccccccc
Q 003296 712 PSKSTGSLSTVAGSVGYIPPEYAYTMR--VTMAGNVYSFGVILLELLTGKTAVNQGNELA---KWVLRNSAQQDKLDHIL 786 (833)
Q Consensus 712 ~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~ 786 (833)
..... ......|+..|+|||+..+.. ++.++||||||+++|||++|+.||....... .........
T Consensus 157 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~-------- 227 (288)
T cd05583 157 AEEEE-RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS-------- 227 (288)
T ss_pred ccccc-ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHcc--------
Confidence 33211 123456899999999987655 7889999999999999999999996432211 111111100
Q ss_pred cccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 003296 787 DFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLL 830 (833)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~ 830 (833)
.+..+ ......+.+++.+||+.||++|||+++|.+.|+
T Consensus 228 ~~~~~------~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~ 265 (288)
T cd05583 228 KPPFP------KTMSAEARDFIQKLLEKDPKKRLGANGADEIKN 265 (288)
T ss_pred CCCCC------cccCHHHHHHHHHHhcCCHhhccCcchHHHHhc
Confidence 00011 112346778999999999999999888866654
No 353
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1.7e-35 Score=310.38 Aligned_cols=254 Identities=19% Similarity=0.222 Sum_probs=198.6
Q ss_pred hcCCccccccCcccEEEEEEc-CCCceEEEEEccccch-hhhccChhHHHHHHHHHhcCCCCCcccceEEEecC--CceE
Q 003296 556 VANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDK-IFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS--DSAY 631 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~--~~~~ 631 (833)
+|...+.||+|+||.||+|.. .+|..||+|.+..... .......+.|.+|++++++++||||+++++++.+. ...+
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (264)
T cd06653 3 NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLS 82 (264)
T ss_pred ceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEE
Confidence 577889999999999999997 4799999998742211 11122346789999999999999999999998764 4588
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeC
Q 003296 632 LFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID 711 (833)
Q Consensus 632 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~ 711 (833)
+||||+++++|.+++.. ...+++.....++.|++.||.||| +.+++||||||+||+++.++.++++|||+++...
T Consensus 83 ~v~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 157 (264)
T cd06653 83 IFVEYMPGGSIKDQLKA--YGALTENVTRRYTRQILQGVSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQ 157 (264)
T ss_pred EEEEeCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECccccccccc
Confidence 99999999999999875 345889999999999999999999 7889999999999999999999999999998653
Q ss_pred CCCC-CCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccc
Q 003296 712 PSKS-TGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNV 790 (833)
Q Consensus 712 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (833)
.... ........|+..|+|||++.+..++.++|||||||++|||++|+.||.+......... .... . .... +
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~~-~-~~~~----~ 230 (264)
T cd06653 158 TICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFK-IATQ-P-TKPM----L 230 (264)
T ss_pred cccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHH-HHcC-C-CCCC----C
Confidence 2111 1112345689999999999888899999999999999999999999975433222111 1111 0 0000 1
Q ss_pred cCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 791 SRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 791 ~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
+.....++.+++.+|++ +|.+||++.+++.|
T Consensus 231 ------p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 231 ------PDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred ------CcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 11234567899999999 57999999998875
No 354
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=1.2e-35 Score=311.72 Aligned_cols=248 Identities=21% Similarity=0.251 Sum_probs=196.0
Q ss_pred cccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEeeCCCCC
Q 003296 563 ELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGT 641 (833)
Q Consensus 563 ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey~~~g~ 641 (833)
+|+|+||.||+|+.. +|+.||+|.+... ........+.+.+|++++++++||||+++++.+..++..|+||||+++|+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKA-DMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGD 79 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecch-hhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCc
Confidence 689999999999986 5999999998422 22222345789999999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCC------
Q 003296 642 LFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS------ 715 (833)
Q Consensus 642 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~------ 715 (833)
|.++++.. ..+++..+..++.|+++||+||| ..+++||||+|+||++++++.+|++|||++........
T Consensus 80 L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 154 (265)
T cd05579 80 LASLLENV--GSLDEDVARIYIAEIVLALEYLH---SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDD 154 (265)
T ss_pred HHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccc
Confidence 99999863 36899999999999999999999 78999999999999999999999999999876533211
Q ss_pred CCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCch
Q 003296 716 TGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSL 795 (833)
Q Consensus 716 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (833)
........++..|+|||+.....++.++|||||||++||+++|+.||..... .......... . . . ...
T Consensus 155 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-~~~~~~~~~~-~-~----~--~~~--- 222 (265)
T cd05579 155 EKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP-EEIFQNILNG-K-I----E--WPE--- 222 (265)
T ss_pred cccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHhcC-C-c----C--CCc---
Confidence 0122345688999999999888889999999999999999999999975432 2222111110 0 0 0 000
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 003296 796 AVRSQMLTVLKVAVACVSVSPEARPKMKSVLRML 829 (833)
Q Consensus 796 ~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L 829 (833)
....+..+.+++.+|++.+|++|||+.+|.+.|
T Consensus 223 -~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 223 -DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred -cccCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence 001245778999999999999999994444433
No 355
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=2.8e-35 Score=316.58 Aligned_cols=247 Identities=22% Similarity=0.287 Sum_probs=194.9
Q ss_pred cCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEe
Q 003296 557 ANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYE 635 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 635 (833)
|...+.+|+|+||+||+|+. .+|..||+|++..... ......+.+.+|++++++++|||++++++++.+.+..|+|||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 101 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGK-QTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVME 101 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEecccc-CchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEe
Confidence 55667899999999999997 4789999999853221 111223578899999999999999999999999999999999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCC
Q 003296 636 YAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715 (833)
Q Consensus 636 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~ 715 (833)
|+. |++.+++... ...++|.++..++.|++.|++||| ..+|+||||||+||+++.++.+|++|||++.....
T Consensus 102 ~~~-~~l~~~l~~~-~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~--- 173 (313)
T cd06633 102 YCL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP--- 173 (313)
T ss_pred cCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChhhEEECCCCCEEEeecCCCcccCC---
Confidence 996 5888887643 346899999999999999999999 78899999999999999999999999998864321
Q ss_pred CCcccccccccccccccccc---CCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccC
Q 003296 716 TGSLSTVAGSVGYIPPEYAY---TMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSR 792 (833)
Q Consensus 716 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 792 (833)
.....|+..|+|||++. ...++.++|||||||++|||++|+.||.......... ..... . .... .
T Consensus 174 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~-~~~~~-~-~~~~-----~- 241 (313)
T cd06633 174 ---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY-HIAQN-D-SPTL-----Q- 241 (313)
T ss_pred ---CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHHhc-C-CCCC-----C-
Confidence 13457899999999974 3568899999999999999999999997554322211 11111 0 0000 0
Q ss_pred CchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 793 TSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 793 ~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.......+.+++.+||+.+|.+||++.|++.+
T Consensus 242 ----~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 242 ----SNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred ----ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01122357789999999999999999999875
No 356
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.7e-36 Score=339.75 Aligned_cols=272 Identities=13% Similarity=0.169 Sum_probs=189.1
Q ss_pred HHHHhcCCccccccCcccEEEEEEcC--CCceEEEEEcc-------------ccchhhhccChhHHHHHHHHHhcCCCCC
Q 003296 552 AMEAVANPLNVELKTRFSTYYKAVMP--SGMSYFIKKLN-------------WSDKIFQLGSHHKFDKELEVLGKLSNSN 616 (833)
Q Consensus 552 ~~~~~~~~~~~ig~g~~g~vy~~~~~--~~~~vavK~~~-------------~~~~~~~~~~~~~~~~E~~~l~~l~H~n 616 (833)
...+.|+..+.||+|+||+||+|..+ ++..+++|.+. .+...........|.+|+++|++++|||
T Consensus 145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hpn 224 (501)
T PHA03210 145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHEN 224 (501)
T ss_pred hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCC
Confidence 34578999999999999999998753 23333333110 0000001112456889999999999999
Q ss_pred cccceEEEecCCceEEEEeeCCCCChhhhhhcCC---CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceee
Q 003296 617 VMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCL---ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFL 693 (833)
Q Consensus 617 iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~---~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill 693 (833)
||++++++..++..|+|+||+. ++|.+++.... .......+...|+.|++.||+||| +.+||||||||+|||+
T Consensus 225 Iv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH---~~gIiHrDLKP~NILl 300 (501)
T PHA03210 225 ILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH---DKKLIHRDIKLENIFL 300 (501)
T ss_pred cCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEE
Confidence 9999999999999999999995 58888775421 112334567789999999999999 7899999999999999
Q ss_pred CCCCCceeccceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCc-ccCCc-c-HHH
Q 003296 694 KSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTA-VNQGN-E-LAK 770 (833)
Q Consensus 694 ~~~~~~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p-~~~~~-~-~~~ 770 (833)
+.++.+||+|||+++........ .....+||+.|+|||++.+..++.++|||||||++|||++|..+ +.... . ..+
T Consensus 301 ~~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~ 379 (501)
T PHA03210 301 NCDGKIVLGDFGTAMPFEKEREA-FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQ 379 (501)
T ss_pred CCCCCEEEEeCCCceecCccccc-ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHH
Confidence 99999999999999876533221 22346799999999999998999999999999999999998854 43221 1 111
Q ss_pred HHHHhhcc---ccccc-------ccccc-cccCCchhHH------HHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 771 WVLRNSAQ---QDKLD-------HILDF-NVSRTSLAVR------SQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 771 ~~~~~~~~---~~~~~-------~~~~~-~~~~~~~~~~------~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
........ .+... ..++. .+........ .....+.+++.+|++.||++|||+.|++.+
T Consensus 380 ~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 380 LLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred HHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 11110000 00000 00000 0000000000 112356778999999999999999999875
No 357
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.1e-35 Score=316.70 Aligned_cols=262 Identities=11% Similarity=0.055 Sum_probs=186.5
Q ss_pred HhcCCccccccCcccEEEEEEcCC----CceEEEEEccccchhhh-------ccChhHHHHHHHHHhcCCCCCcccceEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVMPS----GMSYFIKKLNWSDKIFQ-------LGSHHKFDKELEVLGKLSNSNVMTPLAY 623 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~~----~~~vavK~~~~~~~~~~-------~~~~~~~~~E~~~l~~l~H~niv~~~~~ 623 (833)
..|...+.||+|+||.||+|...+ +..+|+|+......... .........+...+..++|+||++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 467888999999999999999753 45666665421111000 0011223445556777899999999998
Q ss_pred EecCC----ceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCc
Q 003296 624 VLASD----SAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEP 699 (833)
Q Consensus 624 ~~~~~----~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ 699 (833)
+.... ..++++|++.. ++.+.+.. ....++..+..|+.|+++||+||| +.+|+||||||+|||++.++.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiHrDiKp~Nill~~~~~~ 165 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLVE-NTKEIFKR--IKCKNKKLIKNIMKDMLTTLEYIH---EHGISHGDIKPENIMVDGNNRG 165 (294)
T ss_pred eeEecCCceEEEEEEehhcc-CHHHHHHh--hccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCcE
Confidence 76543 34788888754 67666654 223578889999999999999999 7899999999999999999999
Q ss_pred eeccceeeeeeCCCCCC-----CccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHH
Q 003296 700 QIGDIELCKVIDPSKST-----GSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLR 774 (833)
Q Consensus 700 ki~dfgl~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~ 774 (833)
|++|||+|+........ .......||+.|+|||+..+..++.++|||||||++|||++|+.||.+.......+..
T Consensus 166 ~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~ 245 (294)
T PHA02882 166 YIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHA 245 (294)
T ss_pred EEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHH
Confidence 99999999876432211 1112357999999999999989999999999999999999999999754322221111
Q ss_pred hhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 003296 775 NSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRML 829 (833)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L 829 (833)
... +....+...... ....+.++.+++..|++.+|++||+++++.+.+
T Consensus 246 ~~~--~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 246 AKC--DFIKRLHEGKIK-----IKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred hHH--HHHHHhhhhhhc-----cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 100 001111111110 012245688999999999999999999999876
No 358
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=3.3e-35 Score=312.40 Aligned_cols=264 Identities=20% Similarity=0.251 Sum_probs=199.6
Q ss_pred cCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecC--CceEEE
Q 003296 557 ANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS--DSAYLF 633 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~--~~~~lv 633 (833)
|+..+.||+|+||.||+|+.. +|+.||||++.... ......+.+.+|++++++++|||++++++++... +..++|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 78 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN--EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMV 78 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc--ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEE
Confidence 456788999999999999975 68999999995322 1223346789999999999999999999999988 889999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
|||+++ +|.+++... ...+++..+..++.|+++||+||| ..+++|+||||+||++++++.+|++|||++......
T Consensus 79 ~e~~~~-~l~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH---~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~ 153 (287)
T cd07840 79 FEYMDH-DLTGLLDSP-EVKFTESQIKCYMKQLLEGLQYLH---SNGILHRDIKGSNILINNDGVLKLADFGLARPYTKR 153 (287)
T ss_pred eccccc-cHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEEcCCCCEEEccccceeeccCC
Confidence 999975 999988753 246899999999999999999999 778999999999999999999999999999876543
Q ss_pred CCCCccccccccccccccccccC-CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhh--cc--ccccccccc-
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNS--AQ--QDKLDHILD- 787 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~--~~--~~~~~~~~~- 787 (833)
... ......++..|+|||.+.+ ..++.++|||||||++|||+||+.||.............. .. ........+
T Consensus 154 ~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07840 154 NSA-DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKL 232 (287)
T ss_pred Ccc-cccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccc
Confidence 211 1233567889999997764 4578999999999999999999999976543322111100 00 000000000
Q ss_pred ---ccccC--C----c-hhHHH-HHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 788 ---FNVSR--T----S-LAVRS-QMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 788 ---~~~~~--~----~-~~~~~-~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
..... . . ..... .+.++.+++.+||+.+|++||+++|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 233 PWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred hhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 00000 0 0 00011 15678899999999999999999999864
No 359
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=3.6e-35 Score=305.98 Aligned_cols=249 Identities=20% Similarity=0.305 Sum_probs=203.1
Q ss_pred cCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEe
Q 003296 557 ANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYE 635 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 635 (833)
|+..+.||+|++|.||+|... +++.||+|.+..... .....+.+.+|++++++++|||++++++++..++..++|||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (254)
T cd06627 2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKI--KEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILE 79 (254)
T ss_pred ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEeccccc--CHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEe
Confidence 667789999999999999875 788999999953321 11235689999999999999999999999999999999999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCC
Q 003296 636 YAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715 (833)
Q Consensus 636 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~ 715 (833)
|+++++|.+++... ..++|..+..++.|++.|+.||| +.+|+||||||+||+++.++.+|++|||++........
T Consensus 80 ~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 154 (254)
T cd06627 80 YAENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLH---EQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK 154 (254)
T ss_pred cCCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcc
Confidence 99999999999763 56899999999999999999999 78999999999999999999999999999987754332
Q ss_pred CCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCch
Q 003296 716 TGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSL 795 (833)
Q Consensus 716 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (833)
. .....|+..|+|||+..+..++.++||||+|+++|||++|+.||................ .. ...
T Consensus 155 ~--~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~---~~-----~~~---- 220 (254)
T cd06627 155 D--DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDD---HP-----PLP---- 220 (254)
T ss_pred c--ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccC---CC-----CCC----
Confidence 1 234578999999999887778999999999999999999999997544332222111100 00 010
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 796 AVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 796 ~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
...+..+.+++.+||+.+|++|||+.|++.+
T Consensus 221 --~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 221 --EGISPELKDFLMQCFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred --CCCCHHHHHHHHHHHhCChhhCcCHHHHhcC
Confidence 1224567799999999999999999999863
No 360
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1e-36 Score=314.72 Aligned_cols=247 Identities=16% Similarity=0.246 Sum_probs=208.7
Q ss_pred ccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEeeCC
Q 003296 560 LNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAP 638 (833)
Q Consensus 560 ~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey~~ 638 (833)
.+++|+|.||+||-|+. ++|+.||||.+. +.+ ...+.....++|++||++++||.||.+...|+..+..+.|||-+
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvId-Klr-Fp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl- 645 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVID-KLR-FPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL- 645 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeee-ccc-CCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh-
Confidence 47999999999999996 589999999994 322 23344578899999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCC---CCceeccceeeeeeCCCCC
Q 003296 639 KGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSL---KEPQIGDIELCKVIDPSKS 715 (833)
Q Consensus 639 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~---~~~ki~dfgl~~~~~~~~~ 715 (833)
+||..+.+-...++.+++...+.++.||+.||.||| ..+|+|+|+||+|||+.+. -++|++|||+|+++.+...
T Consensus 646 ~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH---~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF 722 (888)
T KOG4236|consen 646 HGDMLEMILSSEKGRLPERITKFLVTQILVALRYLH---FKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF 722 (888)
T ss_pred cchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhh---hcceeeccCCchheeeccCCCCCceeeccccceeecchhhh
Confidence 568888776655678999999999999999999999 7899999999999999643 3789999999999875543
Q ss_pred CCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCch
Q 003296 716 TGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSL 795 (833)
Q Consensus 716 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (833)
. .+++|||.|.|||++....|...-|+||.|||+|--++|..||.++.++.+.+. +..+..++.
T Consensus 723 R---rsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQ-------------NAaFMyPp~ 786 (888)
T KOG4236|consen 723 R---RSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQ-------------NAAFMYPPN 786 (888)
T ss_pred h---hhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhh-------------ccccccCCC
Confidence 2 468999999999999999999999999999999999999999987766544332 112223344
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 796 AVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 796 ~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.+.+....++++|...|+..=.+|-|....+.|
T Consensus 787 PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh 819 (888)
T KOG4236|consen 787 PWSEISPEAIDLINNLLQVKMRKRYSVDKSLSH 819 (888)
T ss_pred chhhcCHHHHHHHHHHHHHHHHHhcchHhhccc
Confidence 566778889999999999999999999887654
No 361
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=4.4e-35 Score=307.47 Aligned_cols=242 Identities=19% Similarity=0.257 Sum_probs=189.7
Q ss_pred HHHHhcCCcccc--ccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEecC
Q 003296 552 AMEAVANPLNVE--LKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVLAS 627 (833)
Q Consensus 552 ~~~~~~~~~~~i--g~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~ 627 (833)
...+.|+..+.+ |+|+||.||++.. .+|..+|+|....... ... |+.+...+ +||||++++++|..+
T Consensus 11 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~-------~~~--e~~~~~~~~~h~~iv~~~~~~~~~ 81 (267)
T PHA03390 11 QFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNF-------NAI--EPMVHQLMKDNPNFIKLYYSVTTL 81 (267)
T ss_pred HHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhc-------chh--hHHHHHHhhcCCCEEEEEEEEecC
Confidence 344667777776 9999999999997 4788999999842110 111 22222222 699999999999999
Q ss_pred CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCC-Cceecccee
Q 003296 628 DSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLK-EPQIGDIEL 706 (833)
Q Consensus 628 ~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~-~~ki~dfgl 706 (833)
+..|+||||+++|+|.+++... ..++|.++..++.|+++|+.||| +.+++||||||+||+++.++ .++++|||+
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~l~dfg~ 156 (267)
T PHA03390 82 KGHVLIMDYIKDGDLFDLLKKE--GKLSEAEVKKIIRQLVEALNDLH---KHNIIHNDIKLENVLYDRAKDRIYLCDYGL 156 (267)
T ss_pred CeeEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEeCCCCeEEEecCcc
Confidence 9999999999999999999863 37999999999999999999999 78899999999999999988 999999999
Q ss_pred eeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccH----HHHHHHhhcccccc
Q 003296 707 CKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNEL----AKWVLRNSAQQDKL 782 (833)
Q Consensus 707 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~----~~~~~~~~~~~~~~ 782 (833)
++..... ....|+..|+|||++.+..++.++|||||||++|||++|+.||...... ..+.... ..
T Consensus 157 ~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~-- 225 (267)
T PHA03390 157 CKIIGTP------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ---QK-- 225 (267)
T ss_pred ceecCCC------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh---cc--
Confidence 8865422 2346899999999999888999999999999999999999999743221 1111111 00
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCC-HHHHHHH
Q 003296 783 DHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPK-MKSVLRM 828 (833)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps-~~evl~~ 828 (833)
.. .........+.+++.+||+.||.+||+ ++|+++|
T Consensus 226 ------~~----~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h 262 (267)
T PHA03390 226 ------KL----PFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKH 262 (267)
T ss_pred ------cC----CcccccCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence 00 011134457889999999999999996 6998864
No 362
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=1.4e-35 Score=313.92 Aligned_cols=252 Identities=21% Similarity=0.301 Sum_probs=202.5
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCC-CCCcccceEEEecCCceEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLS-NSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~~~~lv 633 (833)
+|...+.||+|+||.||+|+.. +|+.||+|++... ........+.+.+|++++++++ ||||+++++++...+..++|
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKR-QLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechH-hccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 5677889999999999999975 7999999998432 2222233467899999999999 99999999999999999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
|||+++|+|.+++.+ ...++|..+..++.|++.||+||| +.+++|+||||+||+++.++.++++|||++......
T Consensus 81 ~e~~~~~~L~~~l~~--~~~l~~~~~~~i~~ql~~~l~~Lh---~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~ 155 (280)
T cd05581 81 LEYAPNGELLQYIRK--YGSLDEKCTRFYAAEILLALEYLH---SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPN 155 (280)
T ss_pred EcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEecCCccccccCCc
Confidence 999999999999986 346999999999999999999999 789999999999999999999999999998865432
Q ss_pred CCC------------------CccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHh
Q 003296 714 KST------------------GSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRN 775 (833)
Q Consensus 714 ~~~------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~ 775 (833)
... .......|+..|+|||+.....++.++|||||||++||+++|+.||........ ....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~~ 234 (280)
T cd05581 156 SSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLT-FQKI 234 (280)
T ss_pred cccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHH-HHHH
Confidence 210 112235688999999998888899999999999999999999999975442211 1111
Q ss_pred hcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCH----HHHHHH
Q 003296 776 SAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKM----KSVLRM 828 (833)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~----~evl~~ 828 (833)
... ....+ ......+.+++.+||+.+|++||++ +|++++
T Consensus 235 ~~~--------~~~~~------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 235 LKL--------EYSFP------PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred Hhc--------CCCCC------CccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 100 00000 1124567899999999999999999 888764
No 363
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1.2e-35 Score=323.52 Aligned_cols=260 Identities=18% Similarity=0.188 Sum_probs=194.9
Q ss_pred HHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCC----
Q 003296 554 EAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD---- 628 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~---- 628 (833)
.+.|...+.||+|+||.||+|+. .+|+.||||++.... ......+.+.+|++++++++||||++++++|....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 91 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPF--QSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDE 91 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCcc--ccccchhHHHHHHHHHHhcCCCCccchhheecccccCCC
Confidence 35677889999999999999996 479999999984321 11223456889999999999999999999987543
Q ss_pred --ceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceecccee
Q 003296 629 --SAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIEL 706 (833)
Q Consensus 629 --~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl 706 (833)
..++|+||+.. +|.++.. ..+++..+..++.|+++||+||| ..+|+||||||+||+++.++.+|++|||+
T Consensus 92 ~~~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dlkp~NIll~~~~~~kL~dfg~ 163 (342)
T cd07879 92 FQDFYLVMPYMQT-DLQKIMG----HPLSEDKVQYLVYQMLCGLKYIH---SAGIIHRDLKPGNLAVNEDCELKILDFGL 163 (342)
T ss_pred CceEEEEeccccc-CHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCCC
Confidence 46999999964 7777653 35899999999999999999999 78899999999999999999999999999
Q ss_pred eeeeCCCCCCCccccccccccccccccccC-CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccc---
Q 003296 707 CKVIDPSKSTGSLSTVAGSVGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKL--- 782 (833)
Q Consensus 707 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~--- 782 (833)
++..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+......+.......+...
T Consensus 164 ~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 238 (342)
T cd07879 164 ARHADAE-----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEF 238 (342)
T ss_pred CcCCCCC-----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence 8764321 134578899999999876 4688999999999999999999999986543322211111000000
Q ss_pred ---------ccccc--ccccCCc--hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 783 ---------DHILD--FNVSRTS--LAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 783 ---------~~~~~--~~~~~~~--~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
..... +...... ........++.+++.+||+.||++||+++|++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h 297 (342)
T cd07879 239 VQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEH 297 (342)
T ss_pred HHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000 0000000 0001123467899999999999999999999976
No 364
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=2.8e-35 Score=320.07 Aligned_cols=264 Identities=19% Similarity=0.197 Sum_probs=196.2
Q ss_pred CccccccCcccEEEEEEcC-CCceEEEEEccccchhhh----------ccChhHHHHHHHHHhcCCCCCcccceEEEecC
Q 003296 559 PLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQ----------LGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS 627 (833)
Q Consensus 559 ~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~----------~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~ 627 (833)
..+.||+|+||.||+|+.. +|+.||||++........ ......+.+|++++++++||||+++++++..+
T Consensus 13 ~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 92 (335)
T PTZ00024 13 KGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEG 92 (335)
T ss_pred hhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecC
Confidence 3468999999999999974 799999999843211110 01123578999999999999999999999999
Q ss_pred CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceee
Q 003296 628 DSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELC 707 (833)
Q Consensus 628 ~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~ 707 (833)
+..++||||++ |+|.+++.. ...+++.....++.|++.||+||| ..+|+||||||+||+++.++.+|++|||++
T Consensus 93 ~~~~lv~e~~~-~~l~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH---~~~i~H~dl~~~nill~~~~~~kl~dfg~~ 166 (335)
T PTZ00024 93 DFINLVMDIMA-SDLKKVVDR--KIRLTESQVKCILLQILNGLNVLH---KWYFMHRDLSPANIFINSKGICKIADFGLA 166 (335)
T ss_pred CcEEEEEeccc-cCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHeEECCCCCEEECCccce
Confidence 99999999997 699999875 345889999999999999999999 789999999999999999999999999999
Q ss_pred eeeCCCC------------CCCccccccccccccccccccCC-cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHH
Q 003296 708 KVIDPSK------------STGSLSTVAGSVGYIPPEYAYTM-RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLR 774 (833)
Q Consensus 708 ~~~~~~~------------~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~ 774 (833)
+...... .........+++.|+|||++.+. .++.++|||||||++|||++|+.||............
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i 246 (335)
T PTZ00024 167 RRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRI 246 (335)
T ss_pred eecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 8654111 01112234578899999998764 4789999999999999999999999865543322111
Q ss_pred hhccccccc----ccc--------cccccCC-chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 775 NSAQQDKLD----HIL--------DFNVSRT-SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 775 ~~~~~~~~~----~~~--------~~~~~~~-~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
......... ... ....... .........++.+++.+|++.||++|||++|++.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~ 313 (335)
T PTZ00024 247 FELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKH 313 (335)
T ss_pred HHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence 110000000 000 0000000 00011224568899999999999999999999875
No 365
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=2.2e-35 Score=317.70 Aligned_cols=268 Identities=20% Similarity=0.225 Sum_probs=197.1
Q ss_pred HHhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCC----
Q 003296 554 EAVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD---- 628 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~---- 628 (833)
.++|...+.||+|+||.||+|+.. +|+.||||++.... ........+.+|++++++++||||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 84 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHN--EKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSK 84 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEecc--CCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccc
Confidence 457888899999999999999974 78999999984221 11222346789999999999999999999886543
Q ss_pred ----ceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccc
Q 003296 629 ----SAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDI 704 (833)
Q Consensus 629 ----~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~df 704 (833)
..++||||+++ ++.+.+... ...+++.++..++.|+++||+||| +.+|+||||||+||++++++.+|++||
T Consensus 85 ~~~~~~~lv~~~~~~-~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH---~~~i~H~dl~p~nil~~~~~~~~l~df 159 (311)
T cd07866 85 RKRGSVYMVTPYMDH-DLSGLLENP-SVKLTESQIKCYMLQLLEGINYLH---ENHILHRDIKAANILIDNQGILKIADF 159 (311)
T ss_pred ccCceEEEEEecCCc-CHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECcC
Confidence 46999999975 787777643 346999999999999999999999 789999999999999999999999999
Q ss_pred eeeeeeCCCCCC---------CccccccccccccccccccCC-cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHH
Q 003296 705 ELCKVIDPSKST---------GSLSTVAGSVGYIPPEYAYTM-RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLR 774 (833)
Q Consensus 705 gl~~~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~ 774 (833)
|+++........ .......|++.|+|||++.+. .++.++|||||||++|||++|++||.+..........
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~ 239 (311)
T cd07866 160 GLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLI 239 (311)
T ss_pred ccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 999765432211 111335678999999987654 5889999999999999999999999765443221110
Q ss_pred hh--ccc--------ccccccc----cccccCC-chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 775 NS--AQQ--------DKLDHIL----DFNVSRT-SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 775 ~~--~~~--------~~~~~~~----~~~~~~~-~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.. ... ....... ....... ..........+.+++.+|++.||++|||+.|++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 240 FKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred HHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 00 000 0000000 0000000 00011223568899999999999999999999864
No 366
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=2.6e-35 Score=307.54 Aligned_cols=249 Identities=20% Similarity=0.279 Sum_probs=202.3
Q ss_pred cCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEe
Q 003296 557 ANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYE 635 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 635 (833)
|+..+.||+|+||.||++.. .+|+.+|+|++..... ......++.+|++++++++||||+++++++......++|||
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd08530 2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSM--SQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVME 79 (256)
T ss_pred ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhc--cHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEeh
Confidence 66778999999999999986 4789999999842211 12235678899999999999999999999999999999999
Q ss_pred eCCCCChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 636 YAPKGTLFDVLHGCL--ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 636 y~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
|+++++|.+++.... ...+++..++.++.|++.||+||| +.+++||||||+||+++.++.+|++|||+++.....
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh---~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~ 156 (256)
T cd08530 80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH---EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN 156 (256)
T ss_pred hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEEecCCcEEEeeccchhhhccC
Confidence 999999999987522 246899999999999999999999 789999999999999999999999999999876543
Q ss_pred CCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCC
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRT 793 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (833)
. .....|++.|+|||+..+..++.++|+||+|+++|||++|+.||...... ...... .. ... ...
T Consensus 157 ~----~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~-~~~~~~-~~-~~~--------~~~ 221 (256)
T cd08530 157 M----AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ-DLRYKV-QR-GKY--------PPI 221 (256)
T ss_pred C----cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHH-hc-CCC--------CCC
Confidence 1 12356889999999998888999999999999999999999999754321 111111 00 010 000
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 794 SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 794 ~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
......++.+++.+|++.+|++||++.|++++
T Consensus 222 ---~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 222 ---PPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred ---chhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 11345678899999999999999999999875
No 367
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1.8e-35 Score=319.75 Aligned_cols=263 Identities=17% Similarity=0.222 Sum_probs=198.7
Q ss_pred HHHHhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEec-CCc
Q 003296 552 AMEAVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLA-SDS 629 (833)
Q Consensus 552 ~~~~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~-~~~ 629 (833)
.+++.|...+.||+|+||.||+|... +|..||||++.... ......+.+.+|++++++++|||||+++++|.. ...
T Consensus 7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 84 (328)
T cd07856 7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPF--STPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED 84 (328)
T ss_pred ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccc--cccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence 45677888999999999999999964 89999999984221 122335678899999999999999999999876 467
Q ss_pred eEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeee
Q 003296 630 AYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKV 709 (833)
Q Consensus 630 ~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~ 709 (833)
.++||||+ +++|.++++. ..+++.....++.|+++||+||| ..+|+||||||+||++++++.+|++|||.+..
T Consensus 85 ~~lv~e~~-~~~L~~~~~~---~~~~~~~~~~~~~ql~~aL~~LH---~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~ 157 (328)
T cd07856 85 IYFVTELL-GTDLHRLLTS---RPLEKQFIQYFLYQILRGLKYVH---SAGVVHRDLKPSNILINENCDLKICDFGLARI 157 (328)
T ss_pred EEEEeehh-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEeECCCCCEEeCccccccc
Confidence 89999999 5699988874 35788888899999999999999 78899999999999999999999999999875
Q ss_pred eCCCCCCCccccccccccccccccccC-CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccc----c
Q 003296 710 IDPSKSTGSLSTVAGSVGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLD----H 784 (833)
Q Consensus 710 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----~ 784 (833)
.... .....++..|+|||++.+ ..++.++|||||||++|||+||+.||........+.......+.... .
T Consensus 158 ~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (328)
T cd07856 158 QDPQ-----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINT 232 (328)
T ss_pred cCCC-----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 4322 134567899999998765 56899999999999999999999999754432211110000000000 0
Q ss_pred ccc---------ccccCCch---hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 785 ILD---------FNVSRTSL---AVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 785 ~~~---------~~~~~~~~---~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
..+ .......+ .......++.+++.+|++.+|++|||+.|++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 233 ICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred ccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000 00000000 001124578899999999999999999999875
No 368
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=3.2e-35 Score=319.11 Aligned_cols=264 Identities=21% Similarity=0.233 Sum_probs=201.9
Q ss_pred cCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCC-----ce
Q 003296 557 ANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD-----SA 630 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~-----~~ 630 (833)
|+..+.||+|+||.||+|... +|+.||||++.... ......+.+.+|++++++++||||+++++++...+ ..
T Consensus 2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVF--DDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccc--ccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence 667789999999999999975 59999999985321 11234568999999999999999999999998775 78
Q ss_pred EEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeee
Q 003296 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVI 710 (833)
Q Consensus 631 ~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~ 710 (833)
|+||||++ ++|.++++. ...+++..+..++.|++.||+||| ..+|+||||||+||+++.++.++++|||++...
T Consensus 80 ~lv~e~~~-~~l~~~l~~--~~~l~~~~~~~i~~~l~~~l~~LH---~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~ 153 (330)
T cd07834 80 YIVTELME-TDLHKVIKS--PQPLTDDHIQYFLYQILRGLKYLH---SANVIHRDLKPSNILVNSNCDLKICDFGLARGV 153 (330)
T ss_pred EEEecchh-hhHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccCceEee
Confidence 99999998 589999875 337999999999999999999999 789999999999999999999999999999876
Q ss_pred CCCCCC-CccccccccccccccccccCC-cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccc----
Q 003296 711 DPSKST-GSLSTVAGSVGYIPPEYAYTM-RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDH---- 784 (833)
Q Consensus 711 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---- 784 (833)
...... .......||..|+|||++.+. .++.++|||||||++|||++|+.||.+..............+.....
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 233 (330)
T cd07834 154 DPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKF 233 (330)
T ss_pred cccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhh
Confidence 543210 122345789999999999877 78999999999999999999999997554322111110000000000
Q ss_pred --------cccc-cccCC---chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 785 --------ILDF-NVSRT---SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 785 --------~~~~-~~~~~---~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.+.. ..... ..........+.+++.+||+.||++|||++|++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 289 (330)
T cd07834 234 ITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH 289 (330)
T ss_pred ccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0000 00000 00011234578899999999999999999999985
No 369
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=2.6e-35 Score=321.04 Aligned_cols=263 Identities=17% Similarity=0.220 Sum_probs=197.0
Q ss_pred HHHHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecC---
Q 003296 552 AMEAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS--- 627 (833)
Q Consensus 552 ~~~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~--- 627 (833)
.+++.|...+.||+|+||.||+|.. .+|+.||||++..... .....+.+.+|++++++++|||||++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~ 91 (345)
T cd07877 14 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ--SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSL 91 (345)
T ss_pred hccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcch--hhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccc
Confidence 5667888899999999999999986 5799999999843211 112345788999999999999999999988643
Q ss_pred ---CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccc
Q 003296 628 ---DSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDI 704 (833)
Q Consensus 628 ---~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~df 704 (833)
...|+++|++ +++|.+++.. ..++|..+..++.|+++||+||| +.+|+||||||+||++++++.+|++||
T Consensus 92 ~~~~~~~lv~~~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~df 164 (345)
T cd07877 92 EEFNDVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDF 164 (345)
T ss_pred cccccEEEEehhc-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEcCCCCEEEecc
Confidence 3478888887 7899988864 35899999999999999999999 788999999999999999999999999
Q ss_pred eeeeeeCCCCCCCccccccccccccccccccC-CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccc
Q 003296 705 ELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLD 783 (833)
Q Consensus 705 gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 783 (833)
|+++..... .....||..|+|||++.+ ..++.++|||||||++|||++|+.||.....................
T Consensus 165 g~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 239 (345)
T cd07877 165 GLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 239 (345)
T ss_pred ccccccccc-----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 998764321 134578999999998765 46889999999999999999999999754332211110000000000
Q ss_pred ccc----cc----------cccCCch--hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 784 HIL----DF----------NVSRTSL--AVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 784 ~~~----~~----------~~~~~~~--~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.+. +. ....... .......++.+++.+|++.||++||++.|++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 240 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred HHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 000 00 0000000 000124467899999999999999999999865
No 370
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=5.3e-35 Score=305.38 Aligned_cols=251 Identities=22% Similarity=0.311 Sum_probs=203.7
Q ss_pred cCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEe
Q 003296 557 ANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYE 635 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 635 (833)
|+..+.||+|+||.||++... ++..||+|++.... ......+.+.+|++++++++|||++++++.+...+..++|+|
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e 79 (258)
T cd08215 2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSN--MSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVME 79 (258)
T ss_pred ceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeeccc--CChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEE
Confidence 667789999999999999975 78999999984321 112345678999999999999999999999999999999999
Q ss_pred eCCCCChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 636 YAPKGTLFDVLHGCL--ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 636 y~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
|+++++|.+++.... ...+++.++..++.+++.|++||| ..+++|+||+|+||+++.++.++++|||++......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 156 (258)
T cd08215 80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH---SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSST 156 (258)
T ss_pred ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHHeEEcCCCcEEECCccceeecccC
Confidence 999999999998643 357999999999999999999999 779999999999999999999999999999876433
Q ss_pred CCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCC
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRT 793 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (833)
.. ......|++.|+|||...+..++.++||||+|+++|||++|+.||.... ..+........ .... +.
T Consensus 157 ~~--~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-~~~~~~~~~~~--~~~~-----~~-- 224 (258)
T cd08215 157 VD--LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN-LLELALKILKG--QYPP-----IP-- 224 (258)
T ss_pred cc--eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc-HHHHHHHHhcC--CCCC-----CC--
Confidence 21 2234578999999999888889999999999999999999999997543 22222111111 0110 11
Q ss_pred chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 794 SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 794 ~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.....++.+++.+||..+|++|||+.|++++
T Consensus 225 ----~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 225 ----SQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred ----CCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0223467899999999999999999999864
No 371
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=2.2e-35 Score=321.39 Aligned_cols=262 Identities=19% Similarity=0.179 Sum_probs=197.2
Q ss_pred HHHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCC---
Q 003296 553 MEAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD--- 628 (833)
Q Consensus 553 ~~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~--- 628 (833)
..+.|+..+.||+|+||.||+|.. .+|..||||++.... ......+.+.+|++++++++||||+++++++....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF--QSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLD 90 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc--cchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccc
Confidence 445688889999999999999986 579999999984221 11223457889999999999999999999987654
Q ss_pred ---ceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccce
Q 003296 629 ---SAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIE 705 (833)
Q Consensus 629 ---~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfg 705 (833)
..++||||+ +++|.+++.. ..+++..+..++.|+++||+||| ..+|+||||||+||+++.++.+|++|||
T Consensus 91 ~~~~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH---~~gi~H~dlkp~Nill~~~~~~kl~dfg 163 (343)
T cd07880 91 RFHDFYLVMPFM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIH---AAGIIHRDLKPGNLAVNEDCELKILDFG 163 (343)
T ss_pred ccceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecc
Confidence 358999999 7799988864 35899999999999999999999 7899999999999999999999999999
Q ss_pred eeeeeCCCCCCCccccccccccccccccccC-CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccc--
Q 003296 706 LCKVIDPSKSTGSLSTVAGSVGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKL-- 782 (833)
Q Consensus 706 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~-- 782 (833)
+++...... ....+++.|+|||++.+ ..++.++||||+||++||+++|+.||.+..................
T Consensus 164 ~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 238 (343)
T cd07880 164 LARQTDSEM-----TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKE 238 (343)
T ss_pred cccccccCc-----cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHH
Confidence 988653221 34568899999998875 4588999999999999999999999975543222111100000000
Q ss_pred -ccccc-----------ccccCCc--hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 783 -DHILD-----------FNVSRTS--LAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 783 -~~~~~-----------~~~~~~~--~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
...+. +...... ........++.+++.+|++.||++|||+.|++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~ 298 (343)
T cd07880 239 FVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH 298 (343)
T ss_pred HHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000 0000000 0001223467899999999999999999999854
No 372
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=5.3e-35 Score=306.01 Aligned_cols=252 Identities=21% Similarity=0.213 Sum_probs=196.2
Q ss_pred cCCccccccCcccEEEEEEcC-CCceEEEEEccccch-hhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 557 ANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDK-IFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
|...+.||+|+||.||++... .+..+++|.++.... ........++.+|+.++++++||||+++++++.+++..++||
T Consensus 2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (260)
T cd08222 2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIIT 81 (260)
T ss_pred ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEE
Confidence 567789999999999999874 455566666532111 111223446788999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCC
Q 003296 635 EYAPKGTLFDVLHGC--LENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDP 712 (833)
Q Consensus 635 ey~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~ 712 (833)
||+++++|.+++... ....++|.+++.++.|+++|+.||| +.+++|+|+||+||+++. +.+|++|||+++....
T Consensus 82 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~ 157 (260)
T cd08222 82 EYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMH---QRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMG 157 (260)
T ss_pred EeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHH---HcCccccCCChhheEeec-CCEeecccCceeecCC
Confidence 999999999988742 2346899999999999999999999 789999999999999975 5699999999987643
Q ss_pred CCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccC
Q 003296 713 SKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSR 792 (833)
Q Consensus 713 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 792 (833)
... ......|++.|+|||+..+..++.++|||||||++|||++|+.||.+... .......... . .+..
T Consensus 158 ~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~-~~~~~~~~~~--~-----~~~~-- 225 (260)
T cd08222 158 SCD--LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF-LSVVLRIVEG--P-----TPSL-- 225 (260)
T ss_pred Ccc--cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH-HHHHHHHHcC--C-----CCCC--
Confidence 321 12345689999999998888889999999999999999999999964432 2222111110 0 0000
Q ss_pred CchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 793 TSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 793 ~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
......++.+++.+||..+|++||++.|++++
T Consensus 226 ----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 226 ----PETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred ----cchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 12334578899999999999999999999875
No 373
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=2.6e-35 Score=321.04 Aligned_cols=262 Identities=19% Similarity=0.206 Sum_probs=198.6
Q ss_pred HHHhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCc--
Q 003296 553 MEAVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDS-- 629 (833)
Q Consensus 553 ~~~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~-- 629 (833)
..++|.....||+|+||.||+|... +++.||||++.... ......+.+.+|++++++++||||+++++++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPF--QSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLE 90 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEeccccc--chhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccc
Confidence 3456888899999999999999975 68999999984221 111234567889999999999999999998876654
Q ss_pred ----eEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccce
Q 003296 630 ----AYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIE 705 (833)
Q Consensus 630 ----~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfg 705 (833)
.++|+||+ +++|.+++.. ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+|++|||
T Consensus 91 ~~~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nill~~~~~~kL~dfg 163 (343)
T cd07851 91 DFQDVYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIH---SAGIIHRDLKPSNIAVNEDCELKILDFG 163 (343)
T ss_pred ccccEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEcccc
Confidence 89999999 6699999874 35899999999999999999999 7899999999999999999999999999
Q ss_pred eeeeeCCCCCCCccccccccccccccccccC-CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccc
Q 003296 706 LCKVIDPSKSTGSLSTVAGSVGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDH 784 (833)
Q Consensus 706 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 784 (833)
++...... .....+|..|+|||++.+ ..++.++|||||||++|||++|+.||.+..............+...+.
T Consensus 164 ~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~ 238 (343)
T cd07851 164 LARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEE 238 (343)
T ss_pred cccccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHH
Confidence 99865322 234578899999998765 367899999999999999999999997554332211110000000000
Q ss_pred ccc------------c-cccCC---chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 785 ILD------------F-NVSRT---SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 785 ~~~------------~-~~~~~---~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
+.. . ..... .........++.+++.+|++.||++|||+.||+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 239 LLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred HHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 000 0 00000 00011235678899999999999999999999864
No 374
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-35 Score=322.64 Aligned_cols=253 Identities=19% Similarity=0.268 Sum_probs=209.1
Q ss_pred HHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEec-----
Q 003296 554 EAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVLA----- 626 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~----- 626 (833)
++.|++.++||.|.+|.|||++. ++|+.+|||++... ....++...|.++++.. .|||++.++|+|..
T Consensus 18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~-----~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~ 92 (953)
T KOG0587|consen 18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPT-----EDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGN 92 (953)
T ss_pred CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCC-----ccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCC
Confidence 45577889999999999999995 68999999998422 22346788899999887 59999999999974
Q ss_pred CCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceecccee
Q 003296 627 SDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIEL 706 (833)
Q Consensus 627 ~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl 706 (833)
++++|||||||.+||.-|++++..+..+.|..+..|+++++.|+.||| ...++|||||-.|||+++++.+|+.|||+
T Consensus 93 ~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH---~nkviHRDikG~NiLLT~e~~VKLvDFGv 169 (953)
T KOG0587|consen 93 GDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLH---NNKVIHRDIKGQNVLLTENAEVKLVDFGV 169 (953)
T ss_pred CCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHh---hcceeeecccCceEEEeccCcEEEeeeee
Confidence 578999999999999999999877778999999999999999999999 88999999999999999999999999999
Q ss_pred eeeeCCCCCCCccccccccccccccccccCC-----cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccc
Q 003296 707 CKVIDPSKSTGSLSTVAGSVGYIPPEYAYTM-----RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDK 781 (833)
Q Consensus 707 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 781 (833)
+...+... ....+.+|||.|||||++.+. .|+..+|+||+|++..||.-|.+|+.+...+...+....
T Consensus 170 SaQldsT~--grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpR----- 242 (953)
T KOG0587|consen 170 SAQLDSTV--GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR----- 242 (953)
T ss_pred eeeeeccc--ccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCC-----
Confidence 98775433 234678999999999998753 378899999999999999999999975544433322111
Q ss_pred ccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 782 LDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
..++....+.....++.++|..|+.+|-++||++.+.++|
T Consensus 243 -------NPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 243 -------NPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred -------CCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 1111111234567789999999999999999999998865
No 375
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=4e-35 Score=319.35 Aligned_cols=263 Identities=22% Similarity=0.247 Sum_probs=194.2
Q ss_pred HhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecC------
Q 003296 555 AVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS------ 627 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~------ 627 (833)
..|...+.||.|+||.||+|.. .+|+.||+|++.... ....+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~----~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTD----PQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTE 80 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCC----CchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccc
Confidence 4677889999999999999997 478999999984322 23456789999999999999999999876654
Q ss_pred --------CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCC-CCC
Q 003296 628 --------DSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKS-LKE 698 (833)
Q Consensus 628 --------~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~-~~~ 698 (833)
...|+||||++ ++|.+++.. ..+++..+..++.|+++||.||| ..+|+||||||+||+++. ++.
T Consensus 81 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH---~~givH~dikp~Nili~~~~~~ 153 (342)
T cd07854 81 DVGSLTELNSVYIVQEYME-TDLANVLEQ---GPLSEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANVFINTEDLV 153 (342)
T ss_pred ccccccccceEEEEeeccc-ccHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCce
Confidence 35799999997 599988863 35889999999999999999999 788999999999999984 567
Q ss_pred ceeccceeeeeeCCCCCC-CccccccccccccccccccC-CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhh
Q 003296 699 PQIGDIELCKVIDPSKST-GSLSTVAGSVGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNS 776 (833)
Q Consensus 699 ~ki~dfgl~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 776 (833)
+|++|||.++........ .......|+..|+|||++.+ ..++.++|||||||++|||++|+.||.+............
T Consensus 154 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~ 233 (342)
T cd07854 154 LKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILE 233 (342)
T ss_pred EEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 899999999865432111 11123468899999997654 4578999999999999999999999976544332211110
Q ss_pred cccc----ccc-------cccc--ccccCCc--hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 777 AQQD----KLD-------HILD--FNVSRTS--LAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 777 ~~~~----~~~-------~~~~--~~~~~~~--~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.... ... .... ......+ ........++.+++.+|++.||++|||+.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 234 SVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred hcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 0000 000 0000 0000000 0001234567899999999999999999999864
No 376
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=1e-34 Score=315.00 Aligned_cols=264 Identities=18% Similarity=0.199 Sum_probs=193.7
Q ss_pred cCCccccccCcccEEEEEEcC-C--CceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEecC----C
Q 003296 557 ANPLNVELKTRFSTYYKAVMP-S--GMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVLAS----D 628 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~----~ 628 (833)
|+..+.||+|+||.||+|... + +..||||++... .......+.+.+|+++++++ +|||||++++++... .
T Consensus 2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNV--FSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccc--cccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 566789999999999999974 4 789999998421 11122346788999999999 599999999876432 4
Q ss_pred ceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeee
Q 003296 629 SAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCK 708 (833)
Q Consensus 629 ~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~ 708 (833)
..|+++||+. ++|.+++.. ...+++..+..++.|++.||+||| ..+|+||||||+||++++++.+||+|||+++
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH---~~givH~dlkp~Nili~~~~~~kl~Dfg~a~ 153 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRS--GQPLTDAHFQSFIYQILCGLKYIH---SANVLHRDLKPGNLLVNADCELKICDFGLAR 153 (332)
T ss_pred cEEEEEeccc-CCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHeEEcCCCCEEeCcCCCce
Confidence 5789999986 699999875 446899999999999999999999 7899999999999999999999999999998
Q ss_pred eeCCCCCC--CccccccccccccccccccC-CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccc----cc
Q 003296 709 VIDPSKST--GSLSTVAGSVGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQ----DK 781 (833)
Q Consensus 709 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~----~~ 781 (833)
........ .......||+.|+|||+..+ ..++.++||||+||++|||++|+.||................+ +.
T Consensus 154 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 233 (332)
T cd07857 154 GFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEET 233 (332)
T ss_pred ecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 66432211 11234579999999998765 4689999999999999999999999975543221111000000 00
Q ss_pred cccccccc----------ccCC--chhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 782 LDHILDFN----------VSRT--SLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 782 ~~~~~~~~----------~~~~--~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
...+.++. .... ..........+.+++.+|++.||++|||+.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 234 LSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred HHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00000000 0000 00001123578899999999999999999999764
No 377
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=1e-34 Score=307.78 Aligned_cols=263 Identities=19% Similarity=0.244 Sum_probs=200.4
Q ss_pred cCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEe
Q 003296 557 ANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYE 635 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 635 (833)
|+..+.||+|+||.||+|+.. +++.||+|++.... ......+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e 78 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN--EEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFE 78 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccc--ccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEec
Confidence 445678999999999999975 69999999995322 223345678899999999999999999999999999999999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCC
Q 003296 636 YAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715 (833)
Q Consensus 636 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~ 715 (833)
|++ ++|.+++.... ..+++..+..++.|++.||+||| ..+|+||||||+||++++++.+|++|||.++.......
T Consensus 79 ~~~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 153 (282)
T cd07829 79 YCD-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCH---SHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR 153 (282)
T ss_pred CcC-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc
Confidence 998 59999998632 46899999999999999999999 78899999999999999999999999999987643321
Q ss_pred CCccccccccccccccccccCC-cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHh--hccc--cc---cccc--
Q 003296 716 TGSLSTVAGSVGYIPPEYAYTM-RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRN--SAQQ--DK---LDHI-- 785 (833)
Q Consensus 716 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~--~~~~--~~---~~~~-- 785 (833)
......++..|+|||++.+. .++.++|||||||++|||++|+.||............. .... .. ....
T Consensus 154 --~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (282)
T cd07829 154 --TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPD 231 (282)
T ss_pred --ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccc
Confidence 12334567889999998766 78999999999999999999999997544322211110 0000 00 0000
Q ss_pred ccccccC---Cc--hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 786 LDFNVSR---TS--LAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 786 ~~~~~~~---~~--~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.+..... .. .........+.+++.+||+.||++||++.|++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 232 YKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred ccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 0000000 00 0011224578999999999999999999999864
No 378
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=4.8e-35 Score=342.88 Aligned_cols=148 Identities=18% Similarity=0.220 Sum_probs=130.3
Q ss_pred HhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
+.|...+.||+|+||.||+|+.. +++.||||+++.. ........+.+.+|+++++.++|||||++++++...+..|+|
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~-~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKA-DMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehh-hccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 45777899999999999999975 7899999999422 211222346789999999999999999999999999999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeee
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCK 708 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~ 708 (833)
|||+++|+|.++++. ...+++..++.|+.||+.||+||| ..+||||||||+|||++.++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~~--~~~l~~~~~~~i~~qil~aL~yLH---~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHI--YGYFDEEMAVKYISEVALALDYLH---RHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999999999975 345889999999999999999999 7799999999999999999999999999986
No 379
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-35 Score=264.48 Aligned_cols=263 Identities=17% Similarity=0.231 Sum_probs=200.2
Q ss_pred hcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
.|+..+.||+|.||+||||+. .+++.||.|+++-.+ .+++......+||.+++.++|.|||++++....+...-+|+
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrldd--ddegvpssalreicllkelkhknivrl~dvlhsdkkltlvf 80 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDD--DDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccC--CCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeH
Confidence 355567899999999999996 578999999984322 23455678899999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
|||.. +|..+.... .+.++......++.|+.+||.|+| ++.+.|||+||.|.|++.+|+.|++|||+++...-.-
T Consensus 81 e~cdq-dlkkyfdsl-ng~~d~~~~rsfmlqllrgl~fch---shnvlhrdlkpqnllin~ngelkladfglarafgipv 155 (292)
T KOG0662|consen 81 EFCDQ-DLKKYFDSL-NGDLDPEIVRSFMLQLLRGLGFCH---SHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV 155 (292)
T ss_pred HHhhH-HHHHHHHhc-CCcCCHHHHHHHHHHHHhhhhhhh---hhhhhhccCCcceEEeccCCcEEecccchhhhcCCce
Confidence 99975 888887754 456899999999999999999999 7889999999999999999999999999998764322
Q ss_pred CCCccccccccccccccccccCCc-ccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccc--------cccc
Q 003296 715 STGSLSTVAGSVGYIPPEYAYTMR-VTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQD--------KLDH 784 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~--------~~~~ 784 (833)
...+..+-|..|.+|.++.+.+ |++..|+||-||++.|+.. |++.|.+ .+......+....-+ .+..
T Consensus 156 --rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg-~dvddqlkrif~~lg~p~ed~wps~t~ 232 (292)
T KOG0662|consen 156 --RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG-NDVDDQLKRIFRLLGTPTEDQWPSMTK 232 (292)
T ss_pred --EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCC-CcHHHHHHHHHHHhCCCccccCCcccc
Confidence 1234456799999999998765 8999999999999999986 5555554 443332222211111 1112
Q ss_pred ccccccc---CCchhHHH----HHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 785 ILDFNVS---RTSLAVRS----QMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 785 ~~~~~~~---~~~~~~~~----~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.-|.... .....+.. ....-.++..+.+.-+|.+|.++++.+++
T Consensus 233 lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 233 LPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred CCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 2221111 11111222 22345678888899999999999998875
No 380
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.2e-36 Score=285.74 Aligned_cols=265 Identities=17% Similarity=0.233 Sum_probs=200.7
Q ss_pred hcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecC-------
Q 003296 556 VANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS------- 627 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~------- 627 (833)
.|+....||+|.||.||+|+.+ +|+.||+|++-. .....+......+|+++|..++|+|++.+++.|...
T Consensus 18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlm--eneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLM--ENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHH--hccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 4555678999999999999975 688899988732 112234456678999999999999999999988642
Q ss_pred -CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceecccee
Q 003296 628 -DSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIEL 706 (833)
Q Consensus 628 -~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl 706 (833)
..+|+|+++|+. ||+.+|... ...++..++.+++.++..||.|+| +..|+|||+||+|+||+.++..|++|||+
T Consensus 96 r~t~ylVf~~ceh-DLaGlLsn~-~vr~sls~Ikk~Mk~Lm~GL~~iH---r~kilHRDmKaaNvLIt~dgilklADFGl 170 (376)
T KOG0669|consen 96 RATFYLVFDFCEH-DLAGLLSNR-KVRFSLSEIKKVMKGLMNGLYYIH---RNKILHRDMKAANVLITKDGILKLADFGL 170 (376)
T ss_pred cceeeeeHHHhhh-hHHHHhcCc-cccccHHHHHHHHHHHHHHHHHHH---HhhHHhhcccHhhEEEcCCceEEeecccc
Confidence 358999999987 999998764 346888999999999999999999 88999999999999999999999999999
Q ss_pred eeeeCCCCC--CCccccccccccccccccccCC-cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccc
Q 003296 707 CKVIDPSKS--TGSLSTVAGSVGYIPPEYAYTM-RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLD 783 (833)
Q Consensus 707 ~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 783 (833)
++.+..... ....+..+-|..|.+||.+.+. .|+++.|||.-|||+.||.||.+-+.+..+..+........+. ..
T Consensus 171 ar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs-~t 249 (376)
T KOG0669|consen 171 ARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGS-IT 249 (376)
T ss_pred ccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhcc-CC
Confidence 987643322 1122344569999999998865 5999999999999999999999998866655443322222111 11
Q ss_pred cccccc--------------cc-CCchhHHHHH------HHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 784 HILDFN--------------VS-RTSLAVRSQM------LTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 784 ~~~~~~--------------~~-~~~~~~~~~~------~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.-+.|. ++ .......+.. .+.++++.+++..||.+||++.|++.|
T Consensus 250 kevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 250 KEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred cccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 111111 00 0001111222 268899999999999999999999876
No 381
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=2.2e-34 Score=299.43 Aligned_cols=242 Identities=22% Similarity=0.259 Sum_probs=195.1
Q ss_pred cccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEeeCCCCC
Q 003296 563 ELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGT 641 (833)
Q Consensus 563 ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey~~~g~ 641 (833)
||+|+||.||++... +|+.||+|.+... ..........+..|++++++++||||+++++.+..++..++||||+++++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 79 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKK-KIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGE 79 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehh-hhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCc
Confidence 689999999999975 6899999998432 22222245689999999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCcccc
Q 003296 642 LFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLST 721 (833)
Q Consensus 642 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~~~~ 721 (833)
|.+++.. ...+++.....++.|+++|+.|+| ..+++|+||||+||+++.++.++++|||.+........ ....
T Consensus 80 L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lh---~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~--~~~~ 152 (250)
T cd05123 80 LFSHLSK--EGRFSEERARFYAAEIVLALEYLH---SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS--RTNT 152 (250)
T ss_pred HHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcceEEEcCCCcEEEeecCcceecccCCC--cccC
Confidence 9999976 336899999999999999999999 78999999999999999999999999999887643321 2245
Q ss_pred ccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchhHHHHH
Q 003296 722 VAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQM 801 (833)
Q Consensus 722 ~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 (833)
..|+..|+|||...+...+.++|+||||+++||+++|+.||..... ............ .++. ...
T Consensus 153 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-~~~~~~~~~~~~--------~~~~------~~~ 217 (250)
T cd05123 153 FCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-KEIYEKILKDPL--------RFPE------FLS 217 (250)
T ss_pred CcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHhcCCC--------CCCC------CCC
Confidence 6789999999999888889999999999999999999999975432 222211111100 0110 113
Q ss_pred HHHHHHHHhccCCCCCCCCCH---HHHHH
Q 003296 802 LTVLKVAVACVSVSPEARPKM---KSVLR 827 (833)
Q Consensus 802 ~~~~~l~~~cl~~dP~~Rps~---~evl~ 827 (833)
.++.+++.+||..||++||++ ++++.
T Consensus 218 ~~l~~~i~~~l~~~p~~R~~~~~~~~l~~ 246 (250)
T cd05123 218 PEARDLISGLLQKDPTKRLGSGGAEEIKA 246 (250)
T ss_pred HHHHHHHHHHhcCCHhhCCCcccHHHHHh
Confidence 467789999999999999999 56554
No 382
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=1.2e-38 Score=319.82 Aligned_cols=419 Identities=31% Similarity=0.433 Sum_probs=261.9
Q ss_pred CCEEECCCCCCCCc-ccccCCCCCCEEECCCCCCCCcccccccCCCCCCEEeCcCCcCCCCCCcccCCCCCCCEEEccCC
Q 003296 10 LKLLNFSKNELVSL-PTFNGFAGLEVLDFSSNNLNGNINLQFDELVSLKSLNLSKNKFNGFLPINLGKTKALEELVLSGN 88 (833)
Q Consensus 10 L~~L~ls~N~l~~i-~~f~~l~~L~~L~Ls~N~l~~~~~~~f~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 88 (833)
++.|.+++|.+..+ +....+..|++|++.+|++... |.+++.+..++.|+.|+|+++ .+|..++.+.+|..|+.++|
T Consensus 47 l~~lils~N~l~~l~~dl~nL~~l~vl~~~~n~l~~l-p~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n 124 (565)
T KOG0472|consen 47 LQKLILSHNDLEVLREDLKNLACLTVLNVHDNKLSQL-PAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSN 124 (565)
T ss_pred hhhhhhccCchhhccHhhhcccceeEEEeccchhhhC-CHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccc
Confidence 45566666666654 4455666666666666666533 335566666666666666665 35556666666666666666
Q ss_pred cCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCcEEECcCCcCCCCCCcccccCCccCccccccccccccCCh
Q 003296 89 AFHGEIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQNKFSGSVPG 168 (833)
Q Consensus 89 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~ 168 (833)
.+. .+|++++.+..|..|+..+|+++ ..|+++.++.+|..|++.+|+++...|..+. ++.|+++++..|-+. .+|.
T Consensus 125 ~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tlP~ 200 (565)
T KOG0472|consen 125 ELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TLPP 200 (565)
T ss_pred cee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cCCh
Confidence 665 45555666666666666666665 3455566666666666666666644444444 666666666666554 3444
Q ss_pred hh--hhcCCEEecccccccccCCccCCCCCCCCEEecccccCcccCCCCCC---cCCcEEEcCCccccCCCCccccCCCC
Q 003296 169 GI--TRFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMS---PNLVRLRLGTNLLIGEIPSATFTSLE 243 (833)
Q Consensus 169 ~~--~~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~---~~L~~L~l~~n~l~~~~~~~~f~~l~ 243 (833)
.+ +..|.-|+|..|++.. .| .|..+..|..|.++.|++. .+|.... +++..|++.+|++.. +|. ...-+.
T Consensus 201 ~lg~l~~L~~LyL~~Nki~~-lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklke-~Pd-e~clLr 275 (565)
T KOG0472|consen 201 ELGGLESLELLYLRRNKIRF-LP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLKE-VPD-EICLLR 275 (565)
T ss_pred hhcchhhhHHHHhhhccccc-CC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeecccccccc-Cch-HHHHhh
Confidence 33 3445556666666653 33 5555666666666666654 3444333 455556666666542 332 344556
Q ss_pred CCCEEECCCCCCCCCCCccccCCCCCcEEEccCCccCC------------------------------------------
Q 003296 244 KLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNG------------------------------------------ 281 (833)
Q Consensus 244 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~------------------------------------------ 281 (833)
+|++||+|+|.|++ .|.+++++ .|+.|-+.+|.+..
T Consensus 276 sL~rLDlSNN~is~-Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~ 353 (565)
T KOG0472|consen 276 SLERLDLSNNDISS-LPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSE 353 (565)
T ss_pred hhhhhcccCCcccc-CCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCC
Confidence 66666666666663 34456666 56666666665420
Q ss_pred ----------------------CChhhhCCCC---CCcEEEccCCcCCCcCchhhcCCCcCcee-eccCCcCcccCcccc
Q 003296 282 ----------------------SLPIQLGSLG---ILQVMNLQLNKLSGEIPSQFSQLKLLSTM-NISWNSLSGSIPSFL 335 (833)
Q Consensus 282 ----------------------~~p~~~~~l~---~L~~L~L~~N~l~~~~p~~~~~l~~L~~L-~Ls~N~l~~~~~~~~ 335 (833)
.+|....... -....+++.|++. .+|..+..++.+.+. .+++|.+ +.+|..+
T Consensus 354 ~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~i-sfv~~~l 431 (565)
T KOG0472|consen 354 SFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKI-SFVPLEL 431 (565)
T ss_pred cccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCcc-ccchHHH
Confidence 1111111111 1344555555554 345444444444333 3344444 4677888
Q ss_pred ccCCCCCEEEccCCccccccCccccCCCCCCEEEccCCcCCccCCCCccccc--ceeeccccccccchhhhhccCCCCCE
Q 003296 336 SNLTNLVNLNLRQNNLNGSIPNSITNMRSLIELQLGGNQLSGTIPMMPPRLQ--IALNLSSNLFEGPIPTTFARLNGLEV 413 (833)
Q Consensus 336 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~--~~L~Ls~N~l~~~~p~~~~~l~~L~~ 413 (833)
+.+++|..|+|++|-+. .+|..++.+..|+.|+++.|+|. .+|......+ ..+-.+.|++....|..+.++.+|+.
T Consensus 432 ~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~t 509 (565)
T KOG0472|consen 432 SQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTT 509 (565)
T ss_pred Hhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcce
Confidence 89999999999999987 78999999999999999999876 3343322222 33445568888777778999999999
Q ss_pred EecccCcCccccchhccCCCCCCeeeCcCCccc
Q 003296 414 LDLSNNRFSGEIPQLLAQMPTLTQLLLTNNQLS 446 (833)
Q Consensus 414 L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 446 (833)
|||.+|.+. .+|..+++|.+|+.|++++|+|+
T Consensus 510 LDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 510 LDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred eccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 999999997 67788999999999999999998
No 383
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=2.6e-34 Score=296.06 Aligned_cols=219 Identities=21% Similarity=0.202 Sum_probs=177.2
Q ss_pred CcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEeeCCCCChhh
Q 003296 566 TRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFD 644 (833)
Q Consensus 566 g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey~~~g~L~~ 644 (833)
|.||.||++++ .+|+.||+|++... ..+.+|...+....||||+++++++...+..++||||+++|+|.+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~---------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKS---------SEYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWS 74 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecch---------hhhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHH
Confidence 88999999997 47899999999421 134456666666779999999999999999999999999999999
Q ss_pred hhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCccccccc
Q 003296 645 VLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAG 724 (833)
Q Consensus 645 ~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~~~~~~g 724 (833)
++.. ...+++..+..++.|+++||+||| +.+|+||||||+||+++.++.++++|||.+...... .....+
T Consensus 75 ~l~~--~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~-----~~~~~~ 144 (237)
T cd05576 75 HISK--FLNIPEECVKRWAAEMVVALDALH---REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS-----CDGEAV 144 (237)
T ss_pred HHHH--hcCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEecccchhccccc-----cccCCc
Confidence 9875 345899999999999999999999 789999999999999999999999999987655322 123456
Q ss_pred cccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchhHHHHHHHH
Q 003296 725 SVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTV 804 (833)
Q Consensus 725 t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (833)
+..|+|||+..+..++.++||||+||++|||++|+.|+....... .......++ .....++
T Consensus 145 ~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~-------------~~~~~~~~~------~~~~~~~ 205 (237)
T cd05576 145 ENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI-------------NTHTTLNIP------EWVSEEA 205 (237)
T ss_pred CccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc-------------ccccccCCc------ccCCHHH
Confidence 788999999988889999999999999999999998875321100 000000111 1223567
Q ss_pred HHHHHhccCCCCCCCCCH
Q 003296 805 LKVAVACVSVSPEARPKM 822 (833)
Q Consensus 805 ~~l~~~cl~~dP~~Rps~ 822 (833)
.+++.+|++.||++||++
T Consensus 206 ~~li~~~l~~dp~~R~~~ 223 (237)
T cd05576 206 RSLLQQLLQFNPTERLGA 223 (237)
T ss_pred HHHHHHHccCCHHHhcCC
Confidence 889999999999999997
No 384
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-34 Score=326.65 Aligned_cols=256 Identities=22% Similarity=0.318 Sum_probs=201.7
Q ss_pred hcCCccccccCcccEEEEEEcC----C----CceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEec
Q 003296 556 VANPLNVELKTRFSTYYKAVMP----S----GMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVLA 626 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~----~----~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~ 626 (833)
+.+..+.+|+|.||.|++|... . ...||||.++... ...+.+.+..|+++|+.+ +|||||.++|+|..
T Consensus 297 ~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~---~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~ 373 (609)
T KOG0200|consen 297 NLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENA---SSSEKKDLMSELNVLKELGKHPNIVNLLGACTQ 373 (609)
T ss_pred hccccceeecccccceEeEEEeecccccccceEEEEEEeccccc---CcHHHHHHHHHHHHHHHhcCCcchhhheeeecc
Confidence 3345569999999999999842 2 4679999995222 224568899999999999 59999999999999
Q ss_pred CCceEEEEeeCCCCChhhhhhcCC-------C-------CCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCcccee
Q 003296 627 SDSAYLFYEYAPKGTLFDVLHGCL-------E-------NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIF 692 (833)
Q Consensus 627 ~~~~~lv~ey~~~g~L~~~l~~~~-------~-------~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nil 692 (833)
++..++|+||+..|+|.++++..+ . ..++....+.++.|||.|++||+ +.++||||+-.+|||
T Consensus 374 ~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~---~~~~vHRDLAaRNVL 450 (609)
T KOG0200|consen 374 DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLA---SVPCVHRDLAARNVL 450 (609)
T ss_pred CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHh---hCCccchhhhhhhEE
Confidence 999999999999999999998754 0 13888899999999999999999 788999999999999
Q ss_pred eCCCCCceeccceeeeeeCCCCCCCccccccc--cccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHH
Q 003296 693 LKSLKEPQIGDIELCKVIDPSKSTGSLSTVAG--SVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELA 769 (833)
Q Consensus 693 l~~~~~~ki~dfgl~~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~ 769 (833)
+.++..+||+|||+|+......... .....| ...|||||.+....|+.|+|||||||+|||++| |..||.+-....
T Consensus 451 i~~~~~~kIaDFGlar~~~~~~~y~-~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~ 529 (609)
T KOG0200|consen 451 ITKNKVIKIADFGLARDHYNKDYYR-TKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTE 529 (609)
T ss_pred ecCCCEEEEccccceeccCCCCceE-ecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHH
Confidence 9999999999999999654433221 111222 235999999999999999999999999999998 788887522122
Q ss_pred HHHHHhhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 003296 770 KWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831 (833)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~ 831 (833)
.. ......+.+++. +..+..++.+++..||+.+|++||+..|+++.++.
T Consensus 530 ~l-~~~l~~G~r~~~------------P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~ 578 (609)
T KOG0200|consen 530 EL-LEFLKEGNRMEQ------------PEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEK 578 (609)
T ss_pred HH-HHHHhcCCCCCC------------CCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHH
Confidence 22 222223222111 11235577899999999999999999999998875
No 385
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-34 Score=309.28 Aligned_cols=241 Identities=17% Similarity=0.148 Sum_probs=194.5
Q ss_pred HHHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEecCCce
Q 003296 553 MEAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVLASDSA 630 (833)
Q Consensus 553 ~~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~ 630 (833)
+++.|+....+|.|+|+.|-++.. ++++..|||++... ..+-.+|+.++.+. +|||||++.+.|.+..+.
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~--------~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~ 391 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR--------ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEI 391 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheecccc--------ccccccccchhhhhcCCCcceeecceecCCcee
Confidence 456777888899999999999986 68999999999422 12345688777766 599999999999999999
Q ss_pred EEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceee-CCCCCceeccceeeee
Q 003296 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFL-KSLKEPQIGDIELCKV 709 (833)
Q Consensus 631 ~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill-~~~~~~ki~dfgl~~~ 709 (833)
|+|||++.+|-+.+.+... .....++..|+.+++.|+.||| ..+|||||+||+|||+ ++.++++++|||.++.
T Consensus 392 ~~v~e~l~g~ell~ri~~~---~~~~~e~~~w~~~lv~Av~~LH---~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~ 465 (612)
T KOG0603|consen 392 YLVMELLDGGELLRRIRSK---PEFCSEASQWAAELVSAVDYLH---EQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSE 465 (612)
T ss_pred eeeehhccccHHHHHHHhc---chhHHHHHHHHHHHHHHHHHHH---hcCeeecCCChhheeecCCCCcEEEEEechhhh
Confidence 9999999999888877642 2222677789999999999999 7899999999999999 5889999999999987
Q ss_pred eCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccccccccc
Q 003296 710 IDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFN 789 (833)
Q Consensus 710 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (833)
.... ..+.+=|..|.|||+.....|++++|||||||+||||++|+.||.....-.+.... .. .+.
T Consensus 466 ~~~~-----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~-i~---------~~~ 530 (612)
T KOG0603|consen 466 LERS-----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTR-IQ---------MPK 530 (612)
T ss_pred Cchh-----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHh-hc---------CCc
Confidence 6543 23456688999999999999999999999999999999999999854332111111 11 111
Q ss_pred ccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 790 VSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 790 ~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
. ....+..+.+|+..||+.||.+||+|.|+..+
T Consensus 531 ~------s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 531 F------SECVSDEAKDLLQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred c------ccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence 1 13456678899999999999999999998754
No 386
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=293.74 Aligned_cols=260 Identities=20% Similarity=0.259 Sum_probs=198.1
Q ss_pred HhcCCccccccCcccEEEEEEc-CCCceEEEEEcc----ccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEe-cCC
Q 003296 555 AVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLN----WSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVL-ASD 628 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~----~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~-~~~ 628 (833)
+.|-..+++|+|+|+.||||.+ ...+-||||+-. |++ .......+...+|.+|.+.++||.||++|+||. +.+
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~Wrd-EKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd 541 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRD-EKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD 541 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhh-HhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence 3444568999999999999996 456778888642 221 122334567899999999999999999999996 567
Q ss_pred ceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeC---CCCCceeccce
Q 003296 629 SAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLK---SLKEPQIGDIE 705 (833)
Q Consensus 629 ~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~---~~~~~ki~dfg 705 (833)
.+|-|+|||+|.||.-+|+. ...+++.++..|+.||+.||.||.+- ++||||-|+||.|||+. ..|.+||.|||
T Consensus 542 sFCTVLEYceGNDLDFYLKQ--hklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFG 618 (775)
T KOG1151|consen 542 SFCTVLEYCEGNDLDFYLKQ--HKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFG 618 (775)
T ss_pred cceeeeeecCCCchhHHHHh--hhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecc
Confidence 89999999999999999986 44689999999999999999999865 68999999999999995 45789999999
Q ss_pred eeeeeCCCCCC-----CccccccccccccccccccCC----cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhh
Q 003296 706 LCKVIDPSKST-----GSLSTVAGSVGYIPPEYAYTM----RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNS 776 (833)
Q Consensus 706 l~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 776 (833)
++++++..... ..++..+||.+|++||.+.-+ +.+.|+||||.|||+|..+.|+.||.....-......
T Consensus 619 LSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqe-- 696 (775)
T KOG1151|consen 619 LSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQE-- 696 (775)
T ss_pred hhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhh--
Confidence 99998754332 123457899999999987533 4789999999999999999999999744332221111
Q ss_pred cccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 003296 777 AQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLR 827 (833)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~ 827 (833)
..+-..-...++. .+....++.++|.+||+..-++|....|+..
T Consensus 697 ---NTIlkAtEVqFP~----KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 697 ---NTILKATEVQFPP----KPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred ---hchhcceeccCCC----CCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 1111110111111 1234557788999999999888888777653
No 387
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-35 Score=291.73 Aligned_cols=263 Identities=16% Similarity=0.172 Sum_probs=204.7
Q ss_pred HHHHhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCC--C----CcccceEEE
Q 003296 552 AMEAVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSN--S----NVMTPLAYV 624 (833)
Q Consensus 552 ~~~~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H--~----niv~~~~~~ 624 (833)
..++.|.....+|+|.||.|-++.+. .+..||||+++... ..++...-|++++.++.+ | -+|++.+||
T Consensus 86 ~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-----kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wF 160 (415)
T KOG0671|consen 86 ILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-----KYREAALIEIEVLQKINESDPNGKFRCVQMRDWF 160 (415)
T ss_pred ccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-----HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhh
Confidence 34677888899999999999999974 68999999995222 245677889999999942 3 378899999
Q ss_pred ecCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCC--------
Q 003296 625 LASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSL-------- 696 (833)
Q Consensus 625 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~-------- 696 (833)
.-.++.|+|+|.+ |-|+++++.+....+.+...+..|+.|++++++||| +.+++|-|+||+|||+.+.
T Consensus 161 dyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh---~~kl~HTDLKPENILfvss~~~~~~~~ 236 (415)
T KOG0671|consen 161 DYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLH---DLKLTHTDLKPENILFVSSEYFKTYNP 236 (415)
T ss_pred hccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHH---hcceeecCCChheEEEeccceEEEecc
Confidence 9999999999988 559999999866668899999999999999999999 8899999999999998322
Q ss_pred ------------CCceeccceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccC
Q 003296 697 ------------KEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQ 764 (833)
Q Consensus 697 ------------~~~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~ 764 (833)
..+||.|||-|....... ++++.|..|.|||++.+-.++.++||||+||||+|+.||...|..
T Consensus 237 k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h-----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqt 311 (415)
T KOG0671|consen 237 KKKVCFIRPLKSTAIKVIDFGSATFDHEHH-----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQT 311 (415)
T ss_pred CCccceeccCCCcceEEEecCCcceeccCc-----ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceeccc
Confidence 247899999998754332 567899999999999999999999999999999999999999986
Q ss_pred CccHHHHHHHhhccccccccccccc------------------------ccCCchh-------HHHHHHHHHHHHHhccC
Q 003296 765 GNELAKWVLRNSAQQDKLDHILDFN------------------------VSRTSLA-------VRSQMLTVLKVAVACVS 813 (833)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~-------~~~~~~~~~~l~~~cl~ 813 (833)
..+....++...--++....++... ....+.. ...+..++++|+.+||.
T Consensus 312 Hen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~ 391 (415)
T KOG0671|consen 312 HENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLE 391 (415)
T ss_pred CCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHc
Confidence 6554433222111111111111111 0000111 11234579999999999
Q ss_pred CCCCCCCCHHHHHHH
Q 003296 814 VSPEARPKMKSVLRM 828 (833)
Q Consensus 814 ~dP~~Rps~~evl~~ 828 (833)
.||.+|+|++|+++|
T Consensus 392 fDP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 392 FDPARRITLREALSH 406 (415)
T ss_pred cCccccccHHHHhcC
Confidence 999999999999875
No 388
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-34 Score=281.07 Aligned_cols=246 Identities=17% Similarity=0.246 Sum_probs=198.5
Q ss_pred HhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEecCCceEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVLASDSAYL 632 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~l 632 (833)
++|+...+||+|+|++|..+.+ ++.+.+|+|+++ +.-..+..+..-...|-.+..+. +||.+|.++.+|+.+..++.
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvk-kel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVK-KELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHH-HHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 4678889999999999999997 478999999994 33333344555677788888776 69999999999999999999
Q ss_pred EEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCC
Q 003296 633 FYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDP 712 (833)
Q Consensus 633 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~ 712 (833)
|.||++||+|.-+++. .+.+++..+..+..+|+-||.||| +.+||.||+|..|||+|..|++|+.|+|+++.--.
T Consensus 329 vieyv~ggdlmfhmqr--qrklpeeharfys~ei~lal~flh---~rgiiyrdlkldnvlldaeghikltdygmcke~l~ 403 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEICLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLG 403 (593)
T ss_pred EEEEecCcceeeehhh--hhcCcHHHhhhhhHHHHHHHHHHh---hcCeeeeeccccceEEccCCceeecccchhhcCCC
Confidence 9999999999988876 567999999999999999999999 88999999999999999999999999999986533
Q ss_pred CCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCccc--CC----ccHHHHHHHhhcccccccccc
Q 003296 713 SKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVN--QG----NELAKWVLRNSAQQDKLDHIL 786 (833)
Q Consensus 713 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~--~~----~~~~~~~~~~~~~~~~~~~~~ 786 (833)
.. ..++++||||.|.|||++.+..|...+|+|++||+++||+.|+.||+ +. ..-..+.... ++
T Consensus 404 ~g--d~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqv---------il 472 (593)
T KOG0695|consen 404 PG--DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQV---------IL 472 (593)
T ss_pred CC--cccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHH---------Hh
Confidence 22 24478999999999999999999999999999999999999999997 11 1112222111 12
Q ss_pred cccccCCchhHHHHHHHHHHHHHhccCCCCCCCCC
Q 003296 787 DFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPK 821 (833)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps 821 (833)
...++. ++..+.++..++..-+.+||.+|..
T Consensus 473 ekqiri----prslsvkas~vlkgflnkdp~erlg 503 (593)
T KOG0695|consen 473 EKQIRI----PRSLSVKASHVLKGFLNKDPKERLG 503 (593)
T ss_pred hhcccc----cceeehhhHHHHHHhhcCCcHHhcC
Confidence 222221 1233445567778889999999953
No 389
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-35 Score=300.00 Aligned_cols=251 Identities=17% Similarity=0.229 Sum_probs=209.9
Q ss_pred hcCCccccccCcccEEEEEEcCC-CceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMPS-GMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
+++....+|-|+||.|=.+.... ...+|+|+++ +....+....+....|-.||...+.|.||++|-.|.++..+|+.|
T Consensus 421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilk-K~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILK-KKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhcccCccceEEEEEecccchHHHHHHHh-HhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 44556779999999998888643 3459999994 445555666788999999999999999999999999999999999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
|-|-||.+...|++ .+.++..+...++..+.+|++||| +.+||.||+||+|.++|.+|.+|+.|||+|+.+..+.
T Consensus 500 EaClGGElWTiLrd--Rg~Fdd~tarF~~acv~EAfeYLH---~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~ 574 (732)
T KOG0614|consen 500 EACLGGELWTILRD--RGSFDDYTARFYVACVLEAFEYLH---RKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR 574 (732)
T ss_pred HhhcCchhhhhhhh--cCCcccchhhhhHHHHHHHHHHHH---hcCceeccCChhheeeccCCceEEeehhhHHHhccCC
Confidence 99999999999987 456888899999999999999999 8999999999999999999999999999999987666
Q ss_pred CCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCc
Q 003296 715 STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTS 794 (833)
Q Consensus 715 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (833)
. +.++||||.|.|||++.....+.++|.||+|+++||+++|.+||.+.+.+..+-..... ++.+-
T Consensus 575 K---TwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkG----id~i~-------- 639 (732)
T KOG0614|consen 575 K---TWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKG----IDKIE-------- 639 (732)
T ss_pred c---eeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhh----hhhhh--------
Confidence 4 36899999999999999999999999999999999999999999987776655433221 11110
Q ss_pred hhHHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHH
Q 003296 795 LAVRSQMLTVLKVAVACVSVSPEARPK-----MKSVLRM 828 (833)
Q Consensus 795 ~~~~~~~~~~~~l~~~cl~~dP~~Rps-----~~evl~~ 828 (833)
.++.......+++.+.+..+|.+|.. +.||-+|
T Consensus 640 -~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH 677 (732)
T KOG0614|consen 640 -FPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKH 677 (732)
T ss_pred -cccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhh
Confidence 11234456778999999999999975 5565544
No 390
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.6e-34 Score=300.99 Aligned_cols=204 Identities=17% Similarity=0.225 Sum_probs=174.1
Q ss_pred cCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEe
Q 003296 557 ANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYE 635 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 635 (833)
|...+.||-|+||.|..+.. ++...||+|.+.++ .............|-.||+..+.+.||++|-.|++.+.+|+|||
T Consensus 631 Fvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKa-DVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMd 709 (1034)
T KOG0608|consen 631 FVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKA-DVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 709 (1034)
T ss_pred eEEEeeecccccceeEEEeecchhhHHHHhhhHHH-HHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEe
Confidence 55678899999999999874 67889999999533 33334445678899999999999999999999999999999999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeC----
Q 003296 636 YAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID---- 711 (833)
Q Consensus 636 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~---- 711 (833)
|++|||+..+|-+ .+.+++..+..++.+++.|+++.| .+++|||||||+|||||.+|++|+.|||+|.-+.
T Consensus 710 YIPGGDmMSLLIr--mgIFeE~LARFYIAEltcAiesVH---kmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHd 784 (1034)
T KOG0608|consen 710 YIPGGDMMSLLIR--MGIFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 784 (1034)
T ss_pred ccCCccHHHHHHH--hccCHHHHHHHHHHHHHHHHHHHH---hccceecccCccceEEccCCceeeeeccccccceeccc
Confidence 9999999999876 567888889999999999999999 9999999999999999999999999999985321
Q ss_pred -----CCCC-----------------------------C--CccccccccccccccccccCCcccccCcchhhHHHHHHH
Q 003296 712 -----PSKS-----------------------------T--GSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLEL 755 (833)
Q Consensus 712 -----~~~~-----------------------------~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el 755 (833)
.+.. . -.....+||+.|+|||++....|+..+|+||.|||||||
T Consensus 785 skYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em 864 (1034)
T KOG0608|consen 785 SKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEM 864 (1034)
T ss_pred cccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHH
Confidence 0000 0 001135799999999999999999999999999999999
Q ss_pred HhCCCcccCCc
Q 003296 756 LTGKTAVNQGN 766 (833)
Q Consensus 756 ltg~~p~~~~~ 766 (833)
+.|+.||.+..
T Consensus 865 ~~g~~pf~~~t 875 (1034)
T KOG0608|consen 865 LVGQPPFLADT 875 (1034)
T ss_pred hhCCCCccCCC
Confidence 99999997543
No 391
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=3.1e-33 Score=310.33 Aligned_cols=269 Identities=15% Similarity=0.113 Sum_probs=184.6
Q ss_pred HHhcCCccccccCcccEEEEEEc-----------------CCCceEEEEEccccchhh----------hccChhHHHHHH
Q 003296 554 EAVANPLNVELKTRFSTYYKAVM-----------------PSGMSYFIKKLNWSDKIF----------QLGSHHKFDKEL 606 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~-----------------~~~~~vavK~~~~~~~~~----------~~~~~~~~~~E~ 606 (833)
.++|+..+.||+|+||.||+|.. .+++.||||++....... .....+.+..|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 45788899999999999999964 245789999985321110 011234466788
Q ss_pred HHHhcCCCCCc-----ccceEEEec--------CCceEEEEeeCCCCChhhhhhcCC----------------------C
Q 003296 607 EVLGKLSNSNV-----MTPLAYVLA--------SDSAYLFYEYAPKGTLFDVLHGCL----------------------E 651 (833)
Q Consensus 607 ~~l~~l~H~ni-----v~~~~~~~~--------~~~~~lv~ey~~~g~L~~~l~~~~----------------------~ 651 (833)
.++.+++|.++ +++++||.. ++..+|||||+++|+|.++++... .
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 88888877665 677888764 356899999999999999997421 1
Q ss_pred CCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCcccccccccccccc
Q 003296 652 NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPP 731 (833)
Q Consensus 652 ~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aP 731 (833)
..++|..+..++.|+++||+|+| ..+|+||||||+||+++.++.+|++|||+++........ ......+|+.|+||
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH---~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~g~~tp~Y~aP 379 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLH---RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINF-NPLYGMLDPRYSPP 379 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCcc-CccccCCCcceeCh
Confidence 13578889999999999999999 778999999999999999999999999999765432211 11223458999999
Q ss_pred ccccCCc--------------------cc--ccCcchhhHHHHHHHHhCCC-cccCCccHHHHHHHhhcccccccccccc
Q 003296 732 EYAYTMR--------------------VT--MAGNVYSFGVILLELLTGKT-AVNQGNELAKWVLRNSAQQDKLDHILDF 788 (833)
Q Consensus 732 E~~~~~~--------------------~~--~~~Dv~S~Gvvl~elltg~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (833)
|.+.... |. .+.||||+||++|||++|.. ||.+........................
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~ 459 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQ 459 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhccc
Confidence 9875322 12 35799999999999999975 6643211111000000000000000000
Q ss_pred cccCCchhHHHHHHHHHHHHHhccCCCC---CCCCCHHHHHHH
Q 003296 789 NVSRTSLAVRSQMLTVLKVAVACVSVSP---EARPKMKSVLRM 828 (833)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~l~~~cl~~dP---~~Rps~~evl~~ 828 (833)
.. .............+++.+++..+| .+|+|++|+++|
T Consensus 460 ~~--~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 460 KY--DFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred CC--CcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 00 001122335678899999999876 689999999976
No 392
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-33 Score=257.74 Aligned_cols=211 Identities=14% Similarity=0.171 Sum_probs=171.1
Q ss_pred HhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhc-CCCCCcccceEEEecCCceEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGK-LSNSNVMTPLAYVLASDSAYL 632 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~-l~H~niv~~~~~~~~~~~~~l 632 (833)
++......||+|+||.|-+-++ .+|+..|||++...- ..+.+++..+|+.+..+ ...|.+|.+||.+..+...++
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tv---n~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwI 122 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV---NSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWI 122 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhc---ChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEE
Confidence 3444567899999999988886 689999999995221 23345778889988655 479999999999999999999
Q ss_pred EEeeCCCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeee
Q 003296 633 FYEYAPKGTLFDVLHGC--LENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVI 710 (833)
Q Consensus 633 v~ey~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~ 710 (833)
.||.|+- ||..+-++. .+..+++...-+||..|.+||.|||+ ...|||||+||+|||++.+|++|+||||++..+
T Consensus 123 cME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L 199 (282)
T KOG0984|consen 123 CMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFGISGYL 199 (282)
T ss_pred eHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEcccccceee
Confidence 9999975 777654431 24578999999999999999999997 668999999999999999999999999999887
Q ss_pred CCCCCCCccccccccccccccccccC----CcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHH
Q 003296 711 DPSKSTGSLSTVAGSVGYIPPEYAYT----MRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLR 774 (833)
Q Consensus 711 ~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~ 774 (833)
..+-. .+..+|.-.|||||.+.. ..|+-|+||||+|+.+.||.+++.||+.+....+...+
T Consensus 200 ~dSiA---kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkq 264 (282)
T KOG0984|consen 200 VDSIA---KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQ 264 (282)
T ss_pred hhhhH---HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHH
Confidence 54321 123568889999998752 36999999999999999999999999866554444433
No 393
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=1e-32 Score=314.91 Aligned_cols=262 Identities=15% Similarity=0.092 Sum_probs=171.1
Q ss_pred HHHhcCCccccccCcccEEEEEEcC-C----CceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEE----
Q 003296 553 MEAVANPLNVELKTRFSTYYKAVMP-S----GMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAY---- 623 (833)
Q Consensus 553 ~~~~~~~~~~ig~g~~g~vy~~~~~-~----~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~---- 623 (833)
..++|+..+.||+|+||.||+|++. + +..||||++.... ..+.+..| .+.+..+.+++.+...
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~------~~e~~~~e--~l~~~~~~~~~~~~~~~~~~ 201 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG------AVEIWMNE--RVRRACPNSCADFVYGFLEP 201 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc------hhHHHHHH--HHHhhchhhHHHHHHhhhcc
Confidence 3457888899999999999999974 5 7899999984211 11112222 1222223333333222
Q ss_pred --EecCCceEEEEeeCCCCChhhhhhcCCCC------------------CCCHHHHHHHHHHHHHHHHhhhcCCCCCeee
Q 003296 624 --VLASDSAYLFYEYAPKGTLFDVLHGCLEN------------------ALDWASRYSIAVGVAQGLAFLHGFTSNPILL 683 (833)
Q Consensus 624 --~~~~~~~~lv~ey~~~g~L~~~l~~~~~~------------------~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiH 683 (833)
+..++..++||||+++|+|.++++..... ...+..+..++.|++.||+||| +.+|+|
T Consensus 202 ~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH---~~gIiH 278 (566)
T PLN03225 202 VSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLH---STGIVH 278 (566)
T ss_pred cccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHH---HCCEEe
Confidence 23456799999999999999998753110 0122345678999999999999 789999
Q ss_pred cCCCccceeeCC-CCCceeccceeeeeeCCCCCCCccccccccccccccccccCC----------------------ccc
Q 003296 684 LDLSTRNIFLKS-LKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTM----------------------RVT 740 (833)
Q Consensus 684 rdlk~~Nill~~-~~~~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~ 740 (833)
|||||+|||++. ++.+||+|||+|+....... .......||+.|||||.+... .++
T Consensus 279 RDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~-~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~ 357 (566)
T PLN03225 279 RDVKPQNIIFSEGSGSFKIIDLGAAADLRVGIN-YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLP 357 (566)
T ss_pred CcCCHHHEEEeCCCCcEEEEeCCCccccccccc-cCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCC
Confidence 999999999985 57899999999986543321 122457899999999965321 244
Q ss_pred ccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccc---ccccccccc----CCchhHHHHHHHHHHHHHhccC
Q 003296 741 MAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKL---DHILDFNVS----RTSLAVRSQMLTVLKVAVACVS 813 (833)
Q Consensus 741 ~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~----~~~~~~~~~~~~~~~l~~~cl~ 813 (833)
.++|||||||++|||+++..|++. ....+........... .....+... ..............+++.+|++
T Consensus 358 ~k~DVwSlGviL~el~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~ 435 (566)
T PLN03225 358 DRFDIYSAGLIFLQMAFPNLRSDS--NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMR 435 (566)
T ss_pred CCcccHHHHHHHHHHHhCcCCCch--HHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHcc
Confidence 577999999999999998766542 2222211111110000 011111100 0000000112345689999999
Q ss_pred CCCCCCCCHHHHHHH
Q 003296 814 VSPEARPKMKSVLRM 828 (833)
Q Consensus 814 ~dP~~Rps~~evl~~ 828 (833)
.||++|||++|+++|
T Consensus 436 ~dP~kR~ta~e~L~H 450 (566)
T PLN03225 436 FKGRQRISAKAALAH 450 (566)
T ss_pred CCcccCCCHHHHhCC
Confidence 999999999999986
No 394
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.98 E-value=1.3e-33 Score=308.79 Aligned_cols=246 Identities=23% Similarity=0.277 Sum_probs=188.8
Q ss_pred cCCccccccCcccE-EEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCC-CCCcccceEEEecCCceEEEE
Q 003296 557 ANPLNVELKTRFST-YYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLS-NSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 557 ~~~~~~ig~g~~g~-vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~~~~lv~ 634 (833)
|...+++|.|+-|+ ||+|.. .|+.||||++-. .......+||..|+.-+ |||||++++.-.+++..||+.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~-------e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIal 582 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLE-------EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIAL 582 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhh-------HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEe
Confidence 55678899998884 699998 688999999931 12234679999999884 999999999999999999999
Q ss_pred eeCCCCChhhhhhcCC-CCC-CCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCC---C--CCceeccceee
Q 003296 635 EYAPKGTLFDVLHGCL-ENA-LDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKS---L--KEPQIGDIELC 707 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~-~~~-l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~---~--~~~ki~dfgl~ 707 (833)
|.|.. +|.+++.... ... ..-.....+..|+++||+||| +.+|||||+||.||||+. + ..++|+|||++
T Consensus 583 ELC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLH---sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfgls 658 (903)
T KOG1027|consen 583 ELCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLH---SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLS 658 (903)
T ss_pred hHhhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHH---hcccccccCCCceEEEEccCCCcceeEEecccccc
Confidence 99966 9999998631 111 111234667899999999999 789999999999999975 3 47899999999
Q ss_pred eeeCCCCCC-CccccccccccccccccccCCcccccCcchhhHHHHHHHHhC-CCcccCCccHHHHHHHhhccccccccc
Q 003296 708 KVIDPSKST-GSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTG-KTAVNQGNELAKWVLRNSAQQDKLDHI 785 (833)
Q Consensus 708 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~ 785 (833)
+.+..+... ....+..||-||+|||++...+-+.++||||+|||+|..++| ..||.+......-+.. ....+..+
T Consensus 659 Kkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~---~~~~L~~L 735 (903)
T KOG1027|consen 659 KKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILT---GNYTLVHL 735 (903)
T ss_pred cccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhc---Cccceeee
Confidence 998765433 234568899999999999988888899999999999999997 8999743322111111 11111111
Q ss_pred ccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 786 LDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
.. ..++ ++.+||.+|+.+||..||++.+|+.|
T Consensus 736 -----~~----~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 736 -----EP----LPDC--EAKDLISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred -----cc----CchH--HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence 00 0111 77899999999999999999999865
No 395
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.98 E-value=6.7e-32 Score=278.96 Aligned_cols=240 Identities=26% Similarity=0.336 Sum_probs=193.7
Q ss_pred cccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEeeCCCCChhhh
Q 003296 567 RFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDV 645 (833)
Q Consensus 567 ~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~ 645 (833)
+||.||+|+.. +|+.+|+|++...... ...+.|.+|++.+++++|+||+++++++......++||||+++++|.++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~ 77 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIK---KKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDL 77 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccc---cHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHH
Confidence 58999999986 5899999999532211 1157899999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCcccccccc
Q 003296 646 LHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGS 725 (833)
Q Consensus 646 l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~~~~~~gt 725 (833)
+... ..+++..+..++.++++|++||| ..+++|+||+|+||++++++.++++|||.+....... ......|+
T Consensus 78 ~~~~--~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~ 149 (244)
T smart00220 78 LKKR--GRLSEDEARFYARQILSALEYLH---SNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---LLTTFVGT 149 (244)
T ss_pred HHhc--cCCCHHHHHHHHHHHHHHHHHHH---HcCeecCCcCHHHeEECCCCcEEEccccceeeecccc---ccccccCC
Confidence 9763 23899999999999999999999 7799999999999999999999999999998775432 22346788
Q ss_pred ccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchhHHHHHHHHH
Q 003296 726 VGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVL 805 (833)
Q Consensus 726 ~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 (833)
..|+|||...+..++.++||||||+++||+++|..||................... ..........++.
T Consensus 150 ~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~ 218 (244)
T smart00220 150 PEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPP-----------FPPPEWKISPEAK 218 (244)
T ss_pred cCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCC-----------CccccccCCHHHH
Confidence 99999999988888999999999999999999999997533333322221111000 0000000345788
Q ss_pred HHHHhccCCCCCCCCCHHHHHHH
Q 003296 806 KVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 806 ~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
+++.+|+..+|++||++.|++++
T Consensus 219 ~~i~~~l~~~p~~Rp~~~~~~~~ 241 (244)
T smart00220 219 DLIRKLLVKDPEKRLTAEEALQH 241 (244)
T ss_pred HHHHHHccCCchhccCHHHHhhC
Confidence 99999999999999999999873
No 396
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.98 E-value=1.1e-36 Score=305.86 Aligned_cols=411 Identities=27% Similarity=0.429 Sum_probs=240.6
Q ss_pred CCCCCCCCEEECCCCCCCCcc-cccCCCCCCEEECCCCCCCCcccccccCCCCCCEEeCcCCcCCCCCCcccCCCCCCCE
Q 003296 4 CGGIDGLKLLNFSKNELVSLP-TFNGFAGLEVLDFSSNNLNGNINLQFDELVSLKSLNLSKNKFNGFLPINLGKTKALEE 82 (833)
Q Consensus 4 ~~~l~~L~~L~ls~N~l~~i~-~f~~l~~L~~L~Ls~N~l~~~~~~~f~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 82 (833)
+.++..|.+|++++|+++++| ++..+..++.|+.++|+++ ..|..+..+.+|+.|+.++|.+.. .|..++.+..|+.
T Consensus 64 l~nL~~l~vl~~~~n~l~~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~e-l~~~i~~~~~l~d 141 (565)
T KOG0472|consen 64 LKNLACLTVLNVHDNKLSQLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELKE-LPDSIGRLLDLED 141 (565)
T ss_pred hhcccceeEEEeccchhhhCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhccccceee-cCchHHHHhhhhh
Confidence 345566666677777666653 4555566666666666665 334455555666666666666552 3444555555555
Q ss_pred EEccCCcCcccCCccccCCCCCCEEeccCCcCCc----------------------cCCccccCCCCCcEEECcCCcCCC
Q 003296 83 LVLSGNAFHGEIPKGIADYRNLTLIDLSANNLSG----------------------SVPDRIGELSKLEVLILSANNLDG 140 (833)
Q Consensus 83 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~----------------------~~~~~~~~l~~L~~L~Ls~N~l~~ 140 (833)
|+..+|+++ ..|.++.++.+|..|++.+|++.. .+|..++.|.+|+.|+|..|+|.
T Consensus 142 l~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~m~~L~~ld~~~N~L~tlP~~lg~l~~L~~LyL~~Nki~- 219 (565)
T KOG0472|consen 142 LDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIAMKRLKHLDCNSNLLETLPPELGGLESLELLYLRRNKIR- 219 (565)
T ss_pred hhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHHHHHHHhcccchhhhhcCChhhcchhhhHHHHhhhcccc-
Confidence 555555555 344444444444444444444443 34444555555555555555554
Q ss_pred CCCcccccCCccCccccccccccccCChhhh---hcCCEEecccccccccCCccCCCCCCCCEEecccccCcccCCCCCC
Q 003296 141 RLPTSLASITTLSRFAANQNKFSGSVPGGIT---RFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMS 217 (833)
Q Consensus 141 ~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~---~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~ 217 (833)
..| +|.++..|.+++++.|.+. .+|.... .++..|||.+|++. ..|+.++-+.+|++||+|+|.+++. |...+
T Consensus 220 ~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is~L-p~sLg 295 (565)
T KOG0472|consen 220 FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDISSL-PYSLG 295 (565)
T ss_pred cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccccC-Ccccc
Confidence 233 4555555555555555443 3444443 23567778888776 4577777777788888888877754 33332
Q ss_pred -cCCcEEEcCCccccC-------------------------------------CCCccccC---CCCCCCEEECCCCCCC
Q 003296 218 -PNLVRLRLGTNLLIG-------------------------------------EIPSATFT---SLEKLTYLELDNNSFT 256 (833)
Q Consensus 218 -~~L~~L~l~~n~l~~-------------------------------------~~~~~~f~---~l~~L~~L~L~~N~l~ 256 (833)
-.|+.|.+.+|.+.. ..++..|. .+.+.+.|+++.-+++
T Consensus 296 nlhL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt 375 (565)
T KOG0472|consen 296 NLHLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLT 375 (565)
T ss_pred cceeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccc
Confidence 356666666665410 00111111 1335566777776666
Q ss_pred CCCCccccCCC--CCcEEEccCCccCCCChhhhCCCCCCcE-EEccCCcCCCcCchhhcCCCcCceeeccCCcCcccCcc
Q 003296 257 GMIPQQLGSCR--SLTLLNLAQNELNGSLPIQLGSLGILQV-MNLQLNKLSGEIPSQFSQLKLLSTMNISWNSLSGSIPS 333 (833)
Q Consensus 257 ~~~~~~~~~l~--~L~~L~L~~N~l~~~~p~~~~~l~~L~~-L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 333 (833)
.++...|..-. -.+..+++.|++. .+|..+..++.++. +.+++|.+ +.+|..++.+++|..|+|++|-+. .+|.
T Consensus 376 ~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~i-sfv~~~l~~l~kLt~L~L~NN~Ln-~LP~ 452 (565)
T KOG0472|consen 376 LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKI-SFVPLELSQLQKLTFLDLSNNLLN-DLPE 452 (565)
T ss_pred cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCcc-ccchHHHHhhhcceeeecccchhh-hcch
Confidence 44333333221 2667777888776 56666666655544 33444443 356666777777777777777776 5666
Q ss_pred ccccCCCCCEEEccCCccccccCccccCCCCCCEEEccCCcCCccCCCCccccc--ceeeccccccccchhhhhccCCCC
Q 003296 334 FLSNLTNLVNLNLRQNNLNGSIPNSITNMRSLIELQLGGNQLSGTIPMMPPRLQ--IALNLSSNLFEGPIPTTFARLNGL 411 (833)
Q Consensus 334 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~--~~L~Ls~N~l~~~~p~~~~~l~~L 411 (833)
.++.+..|+.|+++.|+|. .+|.....+..|+.+-.++|++....|.-...+. ..|||.+|.+. .+|..++++++|
T Consensus 453 e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL 530 (565)
T KOG0472|consen 453 EMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNL 530 (565)
T ss_pred hhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccce
Confidence 6777777777777777775 5666666666666666666777544333222222 46777777776 577889999999
Q ss_pred CEEecccCcCccccchh
Q 003296 412 EVLDLSNNRFSGEIPQL 428 (833)
Q Consensus 412 ~~L~Ls~N~l~~~~p~~ 428 (833)
++|++++|.|. .++..
T Consensus 531 ~hLeL~gNpfr-~Pr~~ 546 (565)
T KOG0472|consen 531 RHLELDGNPFR-QPRHQ 546 (565)
T ss_pred eEEEecCCccC-CCHHH
Confidence 99999999998 44433
No 397
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.97 E-value=5.4e-32 Score=271.10 Aligned_cols=258 Identities=17% Similarity=0.234 Sum_probs=202.8
Q ss_pred HHhcCCccccccCcccEEEEEEcC------CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecC
Q 003296 554 EAVANPLNVELKTRFSTYYKAVMP------SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS 627 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~ 627 (833)
...+....++-+|.||.||+|.+. +.+.|-||.++.... +-....|.+|.-.+..+.|||+.++.+.+.++
T Consensus 283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS---~iQv~~~L~es~lly~~sH~nll~V~~V~ie~ 359 (563)
T KOG1024|consen 283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHAS---QIQVNLLLQESMLLYGASHPNLLSVLGVSIED 359 (563)
T ss_pred hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhccc---HHHHHHHHHHHHHHhcCcCCCccceeEEEeec
Confidence 445667788899999999999763 346677887742221 22346789999999999999999999999765
Q ss_pred -CceEEEEeeCCCCChhhhhhcCC------CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCce
Q 003296 628 -DSAYLFYEYAPKGTLFDVLHGCL------ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQ 700 (833)
Q Consensus 628 -~~~~lv~ey~~~g~L~~~l~~~~------~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~k 700 (833)
+..+.+|.|+.-|+|..+|.-++ .+.++-.+...++.|++.|++||| +.+|||.||..+|++||+..++|
T Consensus 360 ~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh---~~~ViHkDiAaRNCvIdd~LqVk 436 (563)
T KOG1024|consen 360 YATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLH---NHGVIHKDIAARNCVIDDQLQVK 436 (563)
T ss_pred cCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHH---hcCcccchhhhhcceehhheeEE
Confidence 56889999999999999998432 235777788899999999999999 88999999999999999999999
Q ss_pred eccceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhccc
Q 003296 701 IGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQ 779 (833)
Q Consensus 701 i~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 779 (833)
++|-.+++-+-+.+..-.....-....||+||.+....|+.++|||||||++|||+| |+.|+.+-+.. .+.....++
T Consensus 437 ltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPf--Em~~ylkdG 514 (563)
T KOG1024|consen 437 LTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPF--EMEHYLKDG 514 (563)
T ss_pred eccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHH--HHHHHHhcc
Confidence 999999987755443211112334678999999999999999999999999999998 89998754332 122333333
Q ss_pred ccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 003296 780 DKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831 (833)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~ 831 (833)
.++.+ +..++.++..++.-||+.+|++||+.+|++.-|.+
T Consensus 515 yRlaQ------------P~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLse 554 (563)
T KOG1024|consen 515 YRLAQ------------PFNCPDELFTVMACCWALLPEERPSFSQLVICLSE 554 (563)
T ss_pred ceecC------------CCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHH
Confidence 33222 12456688999999999999999999999988865
No 398
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.97 E-value=2.6e-32 Score=267.95 Aligned_cols=258 Identities=19% Similarity=0.184 Sum_probs=201.3
Q ss_pred cCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecC------Cc
Q 003296 557 ANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS------DS 629 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~------~~ 629 (833)
|.....+|.|+- .|.-|.+. .++.||+|++... .......++..+|..++..++|+|||+++.+|... ..
T Consensus 19 y~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~p--f~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 19 YVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRP--FQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeecccCCCCc-eEEecchhhccCceehhhhcCc--cccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 334556777776 55555543 7899999999533 23344567889999999999999999999999754 35
Q ss_pred eEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeee
Q 003296 630 AYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKV 709 (833)
Q Consensus 630 ~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~ 709 (833)
.|+|||||.. +|.+.++- .++-.+...|..|++.|+.|+| +.+|+|||+||+||++..+..+||.|||+|+.
T Consensus 96 ~y~v~e~m~~-nl~~vi~~----elDH~tis~i~yq~~~~ik~lh---s~~IihRdLkPsnivv~~~~~lKi~dfg~ar~ 167 (369)
T KOG0665|consen 96 VYLVMELMDA-NLCQVILM----ELDHETISYILYQMLCGIKHLH---SAGIIHRDLKPSNIVVNSDCTLKILDFGLART 167 (369)
T ss_pred HHHHHHhhhh-HHHHHHHH----hcchHHHHHHHHHHHHHHHHHH---hcceeecccCcccceecchhheeeccchhhcc
Confidence 8999999965 99988873 4788888999999999999999 89999999999999999999999999999986
Q ss_pred eCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccc---
Q 003296 710 IDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHIL--- 786 (833)
Q Consensus 710 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--- 786 (833)
.... ..++..+.|..|.|||++.+..|.+.+||||.||++.||++|+.-|.+...+.+|......-+..-....
T Consensus 168 e~~~---~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL 244 (369)
T KOG0665|consen 168 EDTD---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQL 244 (369)
T ss_pred cCcc---cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHh
Confidence 5433 3557788999999999999988999999999999999999999999988888888654333211111110
Q ss_pred ------------------------cccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 787 ------------------------DFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 787 ------------------------~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
|..+.......+.....+.+++.+||..||++|.+++++++|
T Consensus 245 ~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 245 QPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred hHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 000000001111223457889999999999999999999976
No 399
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.97 E-value=4.5e-34 Score=315.03 Aligned_cols=416 Identities=30% Similarity=0.386 Sum_probs=247.4
Q ss_pred CCEEECCCCCCCCcc--cccCCCCCCEEECCCCCCCCcccccccCCCCCCEEeCcCCcCCCCCCcccCCCCCCCEEEccC
Q 003296 10 LKLLNFSKNELVSLP--TFNGFAGLEVLDFSSNNLNGNINLQFDELVSLKSLNLSKNKFNGFLPINLGKTKALEELVLSG 87 (833)
Q Consensus 10 L~~L~ls~N~l~~i~--~f~~l~~L~~L~Ls~N~l~~~~~~~f~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 87 (833)
++.|+++.|.+...| .....-+|+.|||++|++. ..|..+..+.+|+.|+++.|.|.. .|.+..++.+|++|.|.+
T Consensus 23 ~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~~-vp~s~~~~~~l~~lnL~~ 100 (1081)
T KOG0618|consen 23 LQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIRS-VPSSCSNMRNLQYLNLKN 100 (1081)
T ss_pred HHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHhh-Cchhhhhhhcchhheecc
Confidence 566777777776643 2334444777777777775 456666777777777777777773 556777777777777777
Q ss_pred CcCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCcEEECcCCcCCCCCCcccccCCccCccccccccccccCC
Q 003296 88 NAFHGEIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQNKFSGSVP 167 (833)
Q Consensus 88 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p 167 (833)
|.+. ..|.++..+.+|+.||+|+|++. .+|..+..++.++.+..++|......+. .. .+.+++..|.+.+.++
T Consensus 101 n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~----~~-ik~~~l~~n~l~~~~~ 173 (1081)
T KOG0618|consen 101 NRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQRLGQ----TS-IKKLDLRLNVLGGSFL 173 (1081)
T ss_pred chhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhhhcc----cc-chhhhhhhhhcccchh
Confidence 7776 66777777777777777777775 5666666666666666666621111111 11 4455555555555555
Q ss_pred hhhhhcCCEEecccccccccCCccCCC--------------------CCCCCEEecccccCcccCCCCCCcCCcEEEcCC
Q 003296 168 GGITRFLRNLDLSYNKLLGVIPIDLLS--------------------HPNLQTIDLSVNMLEGSLPQNMSPNLVRLRLGT 227 (833)
Q Consensus 168 ~~~~~~L~~L~Ls~N~l~~~~~~~~~~--------------------~~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~ 227 (833)
.++......|||.+|.+.. .++.+ .++|+.|+.++|.++...+.....++++++++.
T Consensus 174 ~~i~~l~~~ldLr~N~~~~---~dls~~~~l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~~~~~~p~p~nl~~~dis~ 250 (1081)
T KOG0618|consen 174 IDIYNLTHQLDLRYNEMEV---LDLSNLANLEVLHCERNQLSELEISGPSLTALYADHNPLTTLDVHPVPLNLQYLDISH 250 (1081)
T ss_pred cchhhhheeeecccchhhh---hhhhhccchhhhhhhhcccceEEecCcchheeeeccCcceeeccccccccceeeecch
Confidence 4442222245555555541 11222 244555555555555333333334566666666
Q ss_pred ccccCCCCccccCCCCCCCEEECCCCCCCCCCCccccCCCCCcEEEccCCccCCCChhhhCCCCCCcEEEccCCcCCCcC
Q 003296 228 NLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNGSLPIQLGSLGILQVMNLQLNKLSGEI 307 (833)
Q Consensus 228 n~l~~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 307 (833)
|++++ +| .....+.+|+.++..+|+++ .+|..+....+|+.|...+|.++ -+|.....++.|+.|+|..|+|....
T Consensus 251 n~l~~-lp-~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp 326 (1081)
T KOG0618|consen 251 NNLSN-LP-EWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLP 326 (1081)
T ss_pred hhhhc-ch-HHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccccc
Confidence 66654 44 45556666666666666664 33444444455555555555554 34444555666666666666665332
Q ss_pred chhhc-------------------------CCCcCceeeccCCcCcccCccccccCCCCCEEEccCCccccccCccccCC
Q 003296 308 PSQFS-------------------------QLKLLSTMNISWNSLSGSIPSFLSNLTNLVNLNLRQNNLNGSIPNSITNM 362 (833)
Q Consensus 308 p~~~~-------------------------~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 362 (833)
+..|. .++.|+.|.+.+|.++...-..+.+..+|+.|+|++|++.......+.++
T Consensus 327 ~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kl 406 (1081)
T KOG0618|consen 327 DNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKL 406 (1081)
T ss_pred hHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhch
Confidence 22221 23446666666777766555566667777777777777764444456677
Q ss_pred CCCCEEEccCCcCCccCCCCccccc--ceeeccccccccchhhhhccCCCCCEEecccCcCccccchhccCCCCCCeeeC
Q 003296 363 RSLIELQLGGNQLSGTIPMMPPRLQ--IALNLSSNLFEGPIPTTFARLNGLEVLDLSNNRFSGEIPQLLAQMPTLTQLLL 440 (833)
Q Consensus 363 ~~L~~L~L~~N~l~~~~p~~~~~~~--~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 440 (833)
..|++|+||+|+++ .+|.....+. .+|...+|++. ..| .+..++.|+++|+|.|+++...-..-...++|++||+
T Consensus 407 e~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdl 483 (1081)
T KOG0618|consen 407 EELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDL 483 (1081)
T ss_pred HHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeec
Confidence 77777777777776 3443322222 45666677776 455 6777788888888888776543222222367888888
Q ss_pred cCCc
Q 003296 441 TNNQ 444 (833)
Q Consensus 441 s~N~ 444 (833)
++|.
T Consensus 484 SGN~ 487 (1081)
T KOG0618|consen 484 SGNT 487 (1081)
T ss_pred cCCc
Confidence 8876
No 400
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=2.8e-32 Score=254.45 Aligned_cols=256 Identities=15% Similarity=0.181 Sum_probs=196.2
Q ss_pred HhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCC-CCCcccceEEEecC--Cce
Q 003296 555 AVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLS-NSNVMTPLAYVLAS--DSA 630 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~--~~~ 630 (833)
++|+..+.+|+|.|+.||.|.. .+.+.++||.++..+ .+...+|++||..++ |||||++++...++ ...
T Consensus 38 ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk-------kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktp 110 (338)
T KOG0668|consen 38 DDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK-------KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTP 110 (338)
T ss_pred chHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH-------HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCc
Confidence 3566678899999999999984 678999999995332 367899999999998 99999999999876 457
Q ss_pred EEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCC-CCCceeccceeeee
Q 003296 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKS-LKEPQIGDIELCKV 709 (833)
Q Consensus 631 ~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~-~~~~ki~dfgl~~~ 709 (833)
.||+||+.+-|...+-. .++...+..++.++++||.|+| ++||+|||+||.|+++|. ....+++|+|+|.+
T Consensus 111 aLiFE~v~n~Dfk~ly~-----tl~d~dIryY~~elLkALdyCH---S~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEF 182 (338)
T KOG0668|consen 111 SLIFEYVNNTDFKQLYP-----TLTDYDIRYYIYELLKALDYCH---SMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEF 182 (338)
T ss_pred hhHhhhhccccHHHHhh-----hhchhhHHHHHHHHHHHHhHHH---hcCcccccCCcceeeechhhceeeeeecchHhh
Confidence 89999999988776654 3777788889999999999999 899999999999999995 46789999999998
Q ss_pred eCCCCCCCccccccccccccccccccC-CcccccCcchhhHHHHHHHHhCCCccc-CCccHHHHHHHhhcccc-------
Q 003296 710 IDPSKSTGSLSTVAGSVGYIPPEYAYT-MRVTMAGNVYSFGVILLELLTGKTAVN-QGNELAKWVLRNSAQQD------- 780 (833)
Q Consensus 710 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~elltg~~p~~-~~~~~~~~~~~~~~~~~------- 780 (833)
..++... ...+.+..|.-||.+.. ..|+..-|+|||||++.+|+..+.||. +.....+.+.....-+.
T Consensus 183 YHp~~eY---nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl 259 (338)
T KOG0668|consen 183 YHPGKEY---NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYL 259 (338)
T ss_pred cCCCcee---eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHH
Confidence 7665432 44567888999998765 458999999999999999999999986 33444444332211100
Q ss_pred -cccccccccc--------cCCc------hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 781 -KLDHILDFNV--------SRTS------LAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 781 -~~~~~~~~~~--------~~~~------~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
...-.+|+.. +... ....-..+++++++.+.+..|.++|||++|++.|
T Consensus 260 ~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 260 NKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 0000122211 1000 0001124688999999999999999999998865
No 401
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.97 E-value=9.3e-34 Score=298.13 Aligned_cols=341 Identities=25% Similarity=0.374 Sum_probs=195.0
Q ss_pred CCCCCCCCEEECCCCCCCC--ccc-ccCCCCCCEEECCCCCCCCcccccccCCCCCCEEeCcCCcCCCCCCcccCCCCCC
Q 003296 4 CGGIDGLKLLNFSKNELVS--LPT-FNGFAGLEVLDFSSNNLNGNINLQFDELVSLKSLNLSKNKFNGFLPINLGKTKAL 80 (833)
Q Consensus 4 ~~~l~~L~~L~ls~N~l~~--i~~-f~~l~~L~~L~Ls~N~l~~~~~~~f~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 80 (833)
-|-|+-.+-.|+|+|.+++ .|. ...+++++.|-|...++.. .|+.++.|.+|+.|.+++|++.. +-+.++.++.|
T Consensus 3 tgVLpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~~-vPeEL~~lqkLEHLs~~HN~L~~-vhGELs~Lp~L 80 (1255)
T KOG0444|consen 3 TGVLPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLEQ-VPEELSRLQKLEHLSMAHNQLIS-VHGELSDLPRL 80 (1255)
T ss_pred ccccceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhhh-ChHHHHHHhhhhhhhhhhhhhHh-hhhhhccchhh
Confidence 4556777788899999885 563 6678888888888888874 56778888899999999998874 45677888888
Q ss_pred CEEEccCCcCcc-cCCccccCCCCCCEEeccCCcCCccCCccccCCCCCcEEECcCCcCCCCCCcccccCCccCcccccc
Q 003296 81 EELVLSGNAFHG-EIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQ 159 (833)
Q Consensus 81 ~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~ 159 (833)
+.+++..|++.. -+|..+..|..|++||||+|+++ ..|..+..-+++-+|+||+|+|..+...-|.+++.|-.|++++
T Consensus 81 Rsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~ 159 (1255)
T KOG0444|consen 81 RSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSN 159 (1255)
T ss_pred HHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhcccc
Confidence 899998888754 46777888888999999999887 6788888888888899999988866555666776666666665
Q ss_pred ccccccCChhh--hhcCCEEecccccccccCCccCCCCCCCCEEecccccCcccCCCCCCcCCcEEEcCCccccCCCCcc
Q 003296 160 NKFSGSVPGGI--TRFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMSPNLVRLRLGTNLLIGEIPSA 237 (833)
Q Consensus 160 n~l~~~~p~~~--~~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~n~l~~~~~~~ 237 (833)
|++. .+|+.+ +.+|++|+|++|.+....-..+..++.|+.|.+++.+=+- ..+ +.
T Consensus 160 NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl---------------------~N~-Pt 216 (1255)
T KOG0444|consen 160 NRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTL---------------------DNI-PT 216 (1255)
T ss_pred chhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchh---------------------hcC-CC
Confidence 5554 223222 2234444444444332221222223333333333322110 011 12
Q ss_pred ccCCCCCCCEEECCCCCCCCCCCccccCCCCCcEEEccCCccCCCChhhhCCCCCCcEEEccCCcCCCcCchhhcCCCcC
Q 003296 238 TFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNGSLPIQLGSLGILQVMNLQLNKLSGEIPSQFSQLKLL 317 (833)
Q Consensus 238 ~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 317 (833)
++.++.+|..+|||.|.+. ..|..+-++++|+.|+||+|+|+ .+....+.-.+|+.|+||.|+++ ..|+.+..++.|
T Consensus 217 sld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL 293 (1255)
T KOG0444|consen 217 SLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKL 293 (1255)
T ss_pred chhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHH
Confidence 3334444444444444444 33444444444444444444443 22222222334444444444444 334444444444
Q ss_pred ceeeccCCcCc-ccCccccccCCCCCEEEccCCccccccCccccCCCCCCEEEccCCc
Q 003296 318 STMNISWNSLS-GSIPSFLSNLTNLVNLNLRQNNLNGSIPNSITNMRSLIELQLGGNQ 374 (833)
Q Consensus 318 ~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 374 (833)
+.|.+.+|+++ .-+|+.++.+.+|+.+..++|++. ..|+.++.+..|+.|.|+.|+
T Consensus 294 ~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~Nr 350 (1255)
T KOG0444|consen 294 TKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNR 350 (1255)
T ss_pred HHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhcccccc
Confidence 44444444443 123444444444444444444443 344444444444444444443
No 402
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=5.9e-33 Score=265.19 Aligned_cols=262 Identities=19% Similarity=0.256 Sum_probs=199.4
Q ss_pred CccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecC-----CceEE
Q 003296 559 PLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLAS-----DSAYL 632 (833)
Q Consensus 559 ~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~-----~~~~l 632 (833)
..+-||-|+||.||..+++ +|+.||.|++.. -.......+.+.+|+++|.-++|.|+...++..+.. ++.|.
T Consensus 57 PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pn--vfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 57 PDRPIGYGAFGVVWSVTDPRSGKRVALKKMPN--VFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCcccccceeEEEeccCCCCccchhHhhcch--HHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 4578999999999999985 899999999842 222334567899999999999999999999887754 36789
Q ss_pred EEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCC
Q 003296 633 FYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDP 712 (833)
Q Consensus 633 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~ 712 (833)
|.|.|.. ||...+-. ...++-...+-+..||.+||.||| +.+|.||||||.|.|++++...||+|||+|+..+.
T Consensus 135 ~TELmQS-DLHKIIVS--PQ~Ls~DHvKVFlYQILRGLKYLH---sA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 135 LTELMQS-DLHKIIVS--PQALTPDHVKVFVYQILRGLKYLH---TANILHRDIKPGNLLVNSNCILKICDFGLARTWDQ 208 (449)
T ss_pred HHHHHHh-hhhheecc--CCCCCcchhhhhHHHHHhhhHHHh---hcchhhccCCCccEEeccCceEEecccccccccch
Confidence 9999965 88888765 456888888889999999999999 88999999999999999999999999999998765
Q ss_pred CCCCCccccccccccccccccccCC-cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHh--hc----------cc
Q 003296 713 SKSTGSLSTVAGSVGYIPPEYAYTM-RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRN--SA----------QQ 779 (833)
Q Consensus 713 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~--~~----------~~ 779 (833)
.+.. .++..+-|.+|.|||++.+. .|+.+.||||.|||+.|++-++.-|...+.+.+.-... .. .+
T Consensus 209 d~~~-hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACE 287 (449)
T KOG0664|consen 209 RDRL-NMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACE 287 (449)
T ss_pred hhhh-hhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhh
Confidence 5543 45566779999999999875 59999999999999999999988887655544321111 00 00
Q ss_pred ccccccccccccCCch-------hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 003296 780 DKLDHILDFNVSRTSL-------AVRSQMLTVLKVAVACVSVSPEARPKMKSVLRML 829 (833)
Q Consensus 780 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L 829 (833)
+....++....+.+.. .....-.+...+...++..||++|.+..+.+.++
T Consensus 288 GAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 288 GAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred hhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 1111122111111100 0011123566788899999999999999988764
No 403
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.97 E-value=2.4e-33 Score=295.05 Aligned_cols=367 Identities=27% Similarity=0.379 Sum_probs=276.7
Q ss_pred CCCCCEEECCCCCCC-CcccccccCCCCCCEEeCcCCcCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEE
Q 003296 29 FAGLEVLDFSSNNLN-GNINLQFDELVSLKSLNLSKNKFNGFLPINLGKTKALEELVLSGNAFHGEIPKGIADYRNLTLI 107 (833)
Q Consensus 29 l~~L~~L~Ls~N~l~-~~~~~~f~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 107 (833)
++-.+-.|+++|.++ +-.|.....+++++.|.|...++. .+|+.++.+.+|+.|.+++|++. .+...++.|+.|+.+
T Consensus 6 LpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv 83 (1255)
T KOG0444|consen 6 LPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSV 83 (1255)
T ss_pred cceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHH
Confidence 344566889999998 567888888999999999999987 57889999999999999999988 556778889999999
Q ss_pred eccCCcCC-ccCCccccCCCCCcEEECcCCcCCCCCCcccccCCccCccccccccccccCChhhhhc---CCEEeccccc
Q 003296 108 DLSANNLS-GSVPDRIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQNKFSGSVPGGITRF---LRNLDLSYNK 183 (833)
Q Consensus 108 ~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~~---L~~L~Ls~N~ 183 (833)
++.+|++. +-+|..+-.|..|..||||+|+++ ..|..+..-+++-.|++++|+|. .+|..++.+ |-.||||+|+
T Consensus 84 ~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~Nr 161 (1255)
T KOG0444|consen 84 IVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNR 161 (1255)
T ss_pred hhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccch
Confidence 99999985 235666778999999999999998 57777777777777777777765 455555333 4456677776
Q ss_pred ccccCCccCCCCCCCCEEecccccCcccCCCCCCcCCcEEEcCCccccCCCCccccCCCCCCCEEECCCCCCC-CCCCcc
Q 003296 184 LLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMSPNLVRLRLGTNLLIGEIPSATFTSLEKLTYLELDNNSFT-GMIPQQ 262 (833)
Q Consensus 184 l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~n~l~~~~~~~~f~~l~~L~~L~L~~N~l~-~~~~~~ 262 (833)
+.. +|.....+.+|++|+|++|.+.. ..-..+.++++|+.|.+++.+-+ ..+|.+
T Consensus 162 Le~-LPPQ~RRL~~LqtL~Ls~NPL~h-----------------------fQLrQLPsmtsL~vLhms~TqRTl~N~Pts 217 (1255)
T KOG0444|consen 162 LEM-LPPQIRRLSMLQTLKLSNNPLNH-----------------------FQLRQLPSMTSLSVLHMSNTQRTLDNIPTS 217 (1255)
T ss_pred hhh-cCHHHHHHhhhhhhhcCCChhhH-----------------------HHHhcCccchhhhhhhcccccchhhcCCCc
Confidence 653 34455566666677776665531 11112335778888888876643 357888
Q ss_pred ccCCCCCcEEEccCCccCCCChhhhCCCCCCcEEEccCCcCCCcCchhhcCCCcCceeeccCCcCcccCccccccCCCCC
Q 003296 263 LGSCRSLTLLNLAQNELNGSLPIQLGSLGILQVMNLQLNKLSGEIPSQFSQLKLLSTMNISWNSLSGSIPSFLSNLTNLV 342 (833)
Q Consensus 263 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 342 (833)
+.++.+|..+|||.|.+. .+|..+..+.+|+.|+||+|+|+.. ........+|++|+||.|+++ .+|+.+..+++|+
T Consensus 218 ld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~iteL-~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~ 294 (1255)
T KOG0444|consen 218 LDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKITEL-NMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLT 294 (1255)
T ss_pred hhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCceeee-eccHHHHhhhhhhccccchhc-cchHHHhhhHHHH
Confidence 888999999999999987 7888888899999999999998843 344556678889999999988 6888888899999
Q ss_pred EEEccCCcccc-ccCccccCCCCCCEEEccCCcCCccCCCCcccccceeeccccccccchhhhhccCCCCCEEecccCcC
Q 003296 343 NLNLRQNNLNG-SIPNSITNMRSLIELQLGGNQLSGTIPMMPPRLQIALNLSSNLFEGPIPTTFARLNGLEVLDLSNNRF 421 (833)
Q Consensus 343 ~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 421 (833)
.|.+.+|+++- -+|..++.+.+|+.+..++|.+. ..|..+..+..|+.|.|+.|++
T Consensus 295 kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-----------------------lVPEglcRC~kL~kL~L~~NrL 351 (1255)
T KOG0444|consen 295 KLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-----------------------LVPEGLCRCVKLQKLKLDHNRL 351 (1255)
T ss_pred HHHhccCcccccCCccchhhhhhhHHHHhhccccc-----------------------cCchhhhhhHHHHHhcccccce
Confidence 99999988863 46888888888888888888775 4566666777777777777777
Q ss_pred ccccchhccCCCCCCeeeCcCCcccccCC
Q 003296 422 SGEIPQLLAQMPTLTQLLLTNNQLSGVVP 450 (833)
Q Consensus 422 ~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 450 (833)
. ..|+.+--++.|..||+..|+=-..+|
T Consensus 352 i-TLPeaIHlL~~l~vLDlreNpnLVMPP 379 (1255)
T KOG0444|consen 352 I-TLPEAIHLLPDLKVLDLRENPNLVMPP 379 (1255)
T ss_pred e-echhhhhhcCCcceeeccCCcCccCCC
Confidence 5 467777777777777777776443333
No 404
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.96 E-value=3.8e-31 Score=281.92 Aligned_cols=252 Identities=17% Similarity=0.218 Sum_probs=198.9
Q ss_pred HhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEE
Q 003296 555 AVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
++|+....+|.|+||.|||+++ .+|...|||.++ .....+.+-..+|+-+++..+|||||.++|.|...+..|++
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVk----Lep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwic 90 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVK----LEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWIC 90 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeee----ccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEE
Confidence 4566778999999999999997 589999999994 22223445677899999999999999999999999999999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS 713 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~ 713 (833)
||||.+|+|++.-+. .+++++.++..+++...+|++||| +.+-+|||||-.|||+++.|.+|++|||.+..+...
T Consensus 91 MEycgggslQdiy~~--TgplselqiayvcRetl~gl~ylh---s~gk~hRdiKGanilltd~gDvklaDfgvsaqitat 165 (829)
T KOG0576|consen 91 MEYCGGGSLQDIYHV--TGPLSELQIAYVCRETLQGLKYLH---SQGKIHRDIKGANILLTDEGDVKLADFGVSAQITAT 165 (829)
T ss_pred EEecCCCcccceeee--cccchhHHHHHHHhhhhccchhhh---cCCcccccccccceeecccCceeecccCchhhhhhh
Confidence 999999999998876 567999999999999999999999 778899999999999999999999999998765432
Q ss_pred CCCCcccccccccccccccccc---CCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccc
Q 003296 714 KSTGSLSTVAGSVGYIPPEYAY---TMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNV 790 (833)
Q Consensus 714 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (833)
-. ....+.||++|||||+.. .+.|..++|||+.|+...|+-.-++|-.+-..+........ ........-|
T Consensus 166 i~--KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTk-S~~qpp~lkD--- 239 (829)
T KOG0576|consen 166 IA--KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTK-SGFQPPTLKD--- 239 (829)
T ss_pred hh--hhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhc-cCCCCCcccC---
Confidence 21 224688999999999864 45699999999999999999888888543332222221111 1011111111
Q ss_pred cCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 003296 791 SRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLR 827 (833)
Q Consensus 791 ~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~ 827 (833)
.......+-+++..|+-++|++||+++..++
T Consensus 240 ------k~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 240 ------KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred ------CccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 1123445668899999999999999987765
No 405
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.96 E-value=1.8e-32 Score=302.49 Aligned_cols=420 Identities=28% Similarity=0.328 Sum_probs=296.9
Q ss_pred CCCEEECCCCCCCCcc-cccCCCCCCEEECCCCCCCCcccccccCCCCCCEEeCcCCcCCCCCCcccCCCCCCCEEEccC
Q 003296 9 GLKLLNFSKNELVSLP-TFNGFAGLEVLDFSSNNLNGNINLQFDELVSLKSLNLSKNKFNGFLPINLGKTKALEELVLSG 87 (833)
Q Consensus 9 ~L~~L~ls~N~l~~i~-~f~~l~~L~~L~Ls~N~l~~~~~~~f~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 87 (833)
+|+.||+|+|++...| .+..+.+|+.|+++.|.|... |.+..++.+|++|+|.+|.+. ..|..+..+++|+.|++++
T Consensus 46 ~L~~l~lsnn~~~~fp~~it~l~~L~~ln~s~n~i~~v-p~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~ 123 (1081)
T KOG0618|consen 46 KLKSLDLSNNQISSFPIQITLLSHLRQLNLSRNYIRSV-PSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSF 123 (1081)
T ss_pred eeEEeeccccccccCCchhhhHHHHhhcccchhhHhhC-chhhhhhhcchhheeccchhh-cCchhHHhhhcccccccch
Confidence 3999999999999987 478889999999999999854 578899999999999999998 6899999999999999999
Q ss_pred CcCcccCCccccCCCCCCEEeccCC-------------------cCCccCCccccCCCCCcEEECcCCcCCCCCCccccc
Q 003296 88 NAFHGEIPKGIADYRNLTLIDLSAN-------------------NLSGSVPDRIGELSKLEVLILSANNLDGRLPTSLAS 148 (833)
Q Consensus 88 N~l~~~~p~~~~~l~~L~~L~Ls~N-------------------~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 148 (833)
|.+. .+|..+..++.+..++.++| .+.+.++.++..+.. .|+|.+|.+... .+.+
T Consensus 124 N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~~~---dls~ 197 (1081)
T KOG0618|consen 124 NHFG-PIPLVIEVLTAEEELAASNNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEMEVL---DLSN 197 (1081)
T ss_pred hccC-CCchhHHhhhHHHHHhhhcchhhhhhccccchhhhhhhhhcccchhcchhhhhe--eeecccchhhhh---hhhh
Confidence 9997 66766666655555555555 444444444444444 577777776521 2233
Q ss_pred CCccCc--------------------cccccccccccCChhhhhcCCEEecccccccccCCccCCCCCCCCEEecccccC
Q 003296 149 ITTLSR--------------------FAANQNKFSGSVPGGITRFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLSVNML 208 (833)
Q Consensus 149 l~~L~~--------------------l~l~~n~l~~~~p~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l 208 (833)
+.+|+. |+...|.++...+......|+++|+++|++++. |.++..+.+|+.|+..+|++
T Consensus 198 ~~~l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~~~~~~p~p~nl~~~dis~n~l~~l-p~wi~~~~nle~l~~n~N~l 276 (1081)
T KOG0618|consen 198 LANLEVLHCERNQLSELEISGPSLTALYADHNPLTTLDVHPVPLNLQYLDISHNNLSNL-PEWIGACANLEALNANHNRL 276 (1081)
T ss_pred ccchhhhhhhhcccceEEecCcchheeeeccCcceeeccccccccceeeecchhhhhcc-hHHHHhcccceEecccchhH
Confidence 333333 333444444333333334566666666666643 36666666666666666666
Q ss_pred cccCCCCCC--cCCcEEEcCCccccCCCCccccCCCCCCCEEECCCCCCCCCCCccccCCCC-CcEEEccCCccCCCChh
Q 003296 209 EGSLPQNMS--PNLVRLRLGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRS-LTLLNLAQNELNGSLPI 285 (833)
Q Consensus 209 ~~~~p~~~~--~~L~~L~l~~n~l~~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~p~ 285 (833)
+ .+|..+. .+|+.|.+..|.+.- +|+ ....++.|+.|||..|+|....+..|..+.. |+.|+.+.|++......
T Consensus 277 ~-~lp~ri~~~~~L~~l~~~~nel~y-ip~-~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~ 353 (1081)
T KOG0618|consen 277 V-ALPLRISRITSLVSLSAAYNELEY-IPP-FLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSY 353 (1081)
T ss_pred H-hhHHHHhhhhhHHHHHhhhhhhhh-CCC-cccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccc
Confidence 4 3333332 456666666666542 332 3344667777777777776555544444443 66666666766533322
Q ss_pred hhCCCCCCcEEEccCCcCCCcCchhhcCCCcCceeeccCCcCcccCccccccCCCCCEEEccCCccccccCccccCCCCC
Q 003296 286 QLGSLGILQVMNLQLNKLSGEIPSQFSQLKLLSTMNISWNSLSGSIPSFLSNLTNLVNLNLRQNNLNGSIPNSITNMRSL 365 (833)
Q Consensus 286 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 365 (833)
.=.....|+.|++.+|.++...-+.+.+.++|+.|+|++|++.......+.++..|+.|+||+|+++ .+|+++.+++.|
T Consensus 354 ~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L 432 (1081)
T KOG0618|consen 354 EENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRL 432 (1081)
T ss_pred cchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhh
Confidence 2234567899999999999888888999999999999999999665567889999999999999998 788999999999
Q ss_pred CEEEccCCcCCccCCCCc-ccccceeeccccccccch-hhhhccCCCCCEEecccCcCccccchhccCCCCCCeeeCcCC
Q 003296 366 IELQLGGNQLSGTIPMMP-PRLQIALNLSSNLFEGPI-PTTFARLNGLEVLDLSNNRFSGEIPQLLAQMPTLTQLLLTNN 443 (833)
Q Consensus 366 ~~L~L~~N~l~~~~p~~~-~~~~~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N 443 (833)
++|...+|++. .+|... ....+.+|+|.|+++... |... .-++|++|||++|.=....-..|..+.++...+++-|
T Consensus 433 ~tL~ahsN~l~-~fPe~~~l~qL~~lDlS~N~L~~~~l~~~~-p~p~LkyLdlSGN~~l~~d~~~l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 433 HTLRAHSNQLL-SFPELAQLPQLKVLDLSCNNLSEVTLPEAL-PSPNLKYLDLSGNTRLVFDHKTLKVLKSLSQMDITLN 510 (1081)
T ss_pred HHHhhcCCcee-echhhhhcCcceEEecccchhhhhhhhhhC-CCcccceeeccCCcccccchhhhHHhhhhhheecccC
Confidence 99999999997 445322 223378999999998653 3333 3379999999999744345566777777777777766
No 406
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.96 E-value=1.5e-28 Score=247.87 Aligned_cols=212 Identities=29% Similarity=0.414 Sum_probs=183.0
Q ss_pred cccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEeeCCCCC
Q 003296 563 ELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGT 641 (833)
Q Consensus 563 ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey~~~g~ 641 (833)
||+|++|.||++... +|+.+++|+........ ..+.+.+|++.+++++|++|+++++++...+..++||||+++++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~---~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~ 77 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS---LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGS 77 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh---HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCc
Confidence 689999999999985 49999999995322110 24679999999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCC-CCCceeccceeeeeeCCCCCCCccc
Q 003296 642 LFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKS-LKEPQIGDIELCKVIDPSKSTGSLS 720 (833)
Q Consensus 642 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~-~~~~ki~dfgl~~~~~~~~~~~~~~ 720 (833)
|.+++.... ..+++..+..++.+++++++||| ..+++|+||+|.||+++. ++.++++|||.+........ ...
T Consensus 78 l~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh---~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~ 151 (215)
T cd00180 78 LKDLLKENE-GKLSEDEILRILLQILEGLEYLH---SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLK 151 (215)
T ss_pred HHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhh
Confidence 999997532 46899999999999999999999 779999999999999998 89999999999987643321 123
Q ss_pred cccccccccccccccCC-cccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchhHHH
Q 003296 721 TVAGSVGYIPPEYAYTM-RVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRS 799 (833)
Q Consensus 721 ~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (833)
...+...|++||..... .++.++|+|++|++++|+
T Consensus 152 ~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------------- 187 (215)
T cd00180 152 TIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------------- 187 (215)
T ss_pred cccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH--------------------------------------------
Confidence 45678899999998876 788999999999999999
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 003296 800 QMLTVLKVAVACVSVSPEARPKMKSVLRML 829 (833)
Q Consensus 800 ~~~~~~~l~~~cl~~dP~~Rps~~evl~~L 829 (833)
.++.+++.+|++.+|++||++.|+++++
T Consensus 188 --~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 --PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred --HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 3567889999999999999999998764
No 407
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.96 E-value=5e-30 Score=268.87 Aligned_cols=199 Identities=18% Similarity=0.239 Sum_probs=170.2
Q ss_pred HhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhc-----cChhHHHHHHHHHhcCC---CCCcccceEEEe
Q 003296 555 AVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQL-----GSHHKFDKELEVLGKLS---NSNVMTPLAYVL 625 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~-----~~~~~~~~E~~~l~~l~---H~niv~~~~~~~ 625 (833)
.+|.....+|+|+||.|..|.++ +...|+||.+. +.+.... ...-..-.||+||+.++ |+||++++++|+
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~-KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIF-KERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehh-hhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 35778899999999999999985 57889999984 3333211 11123567999999998 999999999999
Q ss_pred cCCceEEEEeeC-CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccc
Q 003296 626 ASDSAYLFYEYA-PKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDI 704 (833)
Q Consensus 626 ~~~~~~lv~ey~-~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~df 704 (833)
+++.+||+||-- ++-||++++.- +..+++.++.-|+.||+.|+++|| +.+|||||||-+||.+|.+|-+|++||
T Consensus 640 ddd~yyl~te~hg~gIDLFd~IE~--kp~m~E~eAk~IFkQV~agi~hlh---~~~ivhrdikdenvivd~~g~~klidf 714 (772)
T KOG1152|consen 640 DDDYYYLETEVHGEGIDLFDFIEF--KPRMDEPEAKLIFKQVVAGIKHLH---DQGIVHRDIKDENVIVDSNGFVKLIDF 714 (772)
T ss_pred cCCeeEEEecCCCCCcchhhhhhc--cCccchHHHHHHHHHHHhcccccc---ccCceecccccccEEEecCCeEEEeec
Confidence 999999999964 46699999986 456999999999999999999999 889999999999999999999999999
Q ss_pred eeeeeeCCCCCCCccccccccccccccccccCCccc-ccCcchhhHHHHHHHHhCCCccc
Q 003296 705 ELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVT-MAGNVYSFGVILLELLTGKTAVN 763 (833)
Q Consensus 705 gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~S~Gvvl~elltg~~p~~ 763 (833)
|-|.....+ ...+++||.+|.|||++.+.+|- ..-|||++||+||.++....||.
T Consensus 715 gsaa~~ksg----pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 715 GSAAYTKSG----PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred cchhhhcCC----CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 988765332 33578999999999999999985 67999999999999999999985
No 408
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.96 E-value=2.2e-29 Score=260.71 Aligned_cols=268 Identities=19% Similarity=0.177 Sum_probs=204.4
Q ss_pred hHHHHHHHhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCC------CCcccc
Q 003296 548 DFTKAMEAVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSN------SNVMTP 620 (833)
Q Consensus 548 ~~~~~~~~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H------~niv~~ 620 (833)
.+.+.....|......|+|-|++|.+|.+. .|+.||||++... .. ..+.=.+|++||++|+. -|++++
T Consensus 425 ~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN-E~----M~KtGl~EleiLkKL~~AD~Edk~Hclrl 499 (752)
T KOG0670|consen 425 RIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN-EV----MHKTGLKELEILKKLNDADPEDKFHCLRL 499 (752)
T ss_pred ehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc-hH----HhhhhhHHHHHHHHhhccCchhhhHHHHH
Confidence 344455677888889999999999999974 6889999999432 21 23445789999999952 489999
Q ss_pred eEEEecCCceEEEEeeCCCCChhhhhhcCCC-CCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCC-C
Q 003296 621 LAYVLASDSAYLFYEYAPKGTLFDVLHGCLE-NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLK-E 698 (833)
Q Consensus 621 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~-~ 698 (833)
+-.|...+++|||+|-+.- +|.++|++.+. ..|.......++.|+.-||..|- ..+|+|.||||.|||+.+.. .
T Consensus 500 ~r~F~hknHLClVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK---~c~vlHaDIKPDNiLVNE~k~i 575 (752)
T KOG0670|consen 500 FRHFKHKNHLCLVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLK---KCGVLHADIKPDNILVNESKNI 575 (752)
T ss_pred HHHhhhcceeEEEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHH---hcCeeecccCccceEeccCcce
Confidence 9999999999999998754 99999987543 36788888999999999999999 88999999999999998654 5
Q ss_pred ceeccceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCcc--HHHHHHHhh
Q 003296 699 PQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNE--LAKWVLRNS 776 (833)
Q Consensus 699 ~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~--~~~~~~~~~ 776 (833)
.|+||||-|......+. +.+.-+..|.|||++.+-+|+...|+||.||.|||+.||+..|.+... +..+.+...
T Consensus 576 LKLCDfGSA~~~~enei----tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~K 651 (752)
T KOG0670|consen 576 LKLCDFGSASFASENEI----TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELK 651 (752)
T ss_pred eeeccCccccccccccc----cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhc
Confidence 79999999987765543 234456789999999999999999999999999999999999985432 222221111
Q ss_pred c--------ccccccccccccc----------------------cC-------------CchhHHHHHHHHHHHHHhccC
Q 003296 777 A--------QQDKLDHILDFNV----------------------SR-------------TSLAVRSQMLTVLKVAVACVS 813 (833)
Q Consensus 777 ~--------~~~~~~~~~~~~~----------------------~~-------------~~~~~~~~~~~~~~l~~~cl~ 813 (833)
. .+...+..+|..+ .+ .+........++.+|+.+|+.
T Consensus 652 Gk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~ 731 (752)
T KOG0670|consen 652 GKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLI 731 (752)
T ss_pred CCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhc
Confidence 0 0111111111110 00 111223456788999999999
Q ss_pred CCCCCCCCHHHHHHH
Q 003296 814 VSPEARPKMKSVLRM 828 (833)
Q Consensus 814 ~dP~~Rps~~evl~~ 828 (833)
.||++|.|..|+++|
T Consensus 732 LdP~KRit~nqAL~H 746 (752)
T KOG0670|consen 732 LDPEKRITVNQALKH 746 (752)
T ss_pred cChhhcCCHHHHhcC
Confidence 999999999999876
No 409
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.95 E-value=1.8e-30 Score=261.16 Aligned_cols=415 Identities=22% Similarity=0.262 Sum_probs=303.2
Q ss_pred CEEECCCCCCCCcccccCCCCCCEEECCCCCCCCcccccccCCCCCCEEeCcCCcCCCCCCcccCCCCCCCEEEccC-Cc
Q 003296 11 KLLNFSKNELVSLPTFNGFAGLEVLDFSSNNLNGNINLQFDELVSLKSLNLSKNKFNGFLPINLGKTKALEELVLSG-NA 89 (833)
Q Consensus 11 ~~L~ls~N~l~~i~~f~~l~~L~~L~Ls~N~l~~~~~~~f~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~-N~ 89 (833)
...++++-.|++||+ .-.+....++|..|+|+.+.+.+|+.+++|+.||||+|+|+.+-|.+|.++++|.+|-+.+ |+
T Consensus 49 ~~VdCr~~GL~eVP~-~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~Nk 127 (498)
T KOG4237|consen 49 GIVDCRGKGLTEVPA-NLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNK 127 (498)
T ss_pred ceEEccCCCcccCcc-cCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCc
Confidence 467999999999996 4456788899999999999999999999999999999999999999999999999888888 99
Q ss_pred CcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCcEEECcCCcCCCCCCcccccCCccCccccccccccccCChh
Q 003296 90 FHGEIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQNKFSGSVPGG 169 (833)
Q Consensus 90 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~ 169 (833)
|+.+..+.|.+|..|+.|.+.-|++.-+..+.|..|++|..|.|..|.+..+.-.+|..+..++.+.+..|.+...
T Consensus 128 I~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icd---- 203 (498)
T KOG4237|consen 128 ITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICD---- 203 (498)
T ss_pred hhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccc----
Confidence 9988888999999999999999999999999999999999999999999987777999999999999988875321
Q ss_pred hhhcCCEE--ecccccccccCCccCCCCCCCCEEecccccCcccCCCCCCcCCcEE---EcCCccccCCCCccccCCCCC
Q 003296 170 ITRFLRNL--DLSYNKLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMSPNLVRL---RLGTNLLIGEIPSATFTSLEK 244 (833)
Q Consensus 170 ~~~~L~~L--~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~L~~L---~l~~n~l~~~~~~~~f~~l~~ 244 (833)
.+|+.+ ++.. .|..+....-..-..+.++++..+-+..+.-.++.+ ..+.......-|...|..+++
T Consensus 204 --CnL~wla~~~a~------~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~ 275 (498)
T KOG4237|consen 204 --CNLPWLADDLAM------NPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPN 275 (498)
T ss_pred --cccchhhhHHhh------chhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhccc
Confidence 112221 1111 122233333333333444444333222222122111 112222344556678999999
Q ss_pred CCEEECCCCCCCCCCCccccCCCCCcEEEccCCccCCCChhhhCCCCCCcEEEccCCcCCCcCchhhcCCCcCceeeccC
Q 003296 245 LTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNGSLPIQLGSLGILQVMNLQLNKLSGEIPSQFSQLKLLSTMNISW 324 (833)
Q Consensus 245 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 324 (833)
|+.|+|++|+|+.+.+.+|.++..++.|.|..|+|...-...|.++..|+.|+|.+|+|+...|..|..+.+|.+|+|-.
T Consensus 276 L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~ 355 (498)
T KOG4237|consen 276 LRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLS 355 (498)
T ss_pred ceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehcc
Confidence 99999999999999999999999999999999999877778899999999999999999999999999999999999988
Q ss_pred CcCccc-----Ccccc-----------ccCCCCCEEEccCCcccc---ccCcccc---------CCCCCCE-EEccCCcC
Q 003296 325 NSLSGS-----IPSFL-----------SNLTNLVNLNLRQNNLNG---SIPNSIT---------NMRSLIE-LQLGGNQL 375 (833)
Q Consensus 325 N~l~~~-----~~~~~-----------~~l~~L~~L~L~~N~l~~---~~p~~~~---------~l~~L~~-L~L~~N~l 375 (833)
|.+.-- +-+++ ..-..++.+.++++.+.. ..|+..+ .++-+.+ ...|++.+
T Consensus 356 Np~~CnC~l~wl~~Wlr~~~~~~~~~Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~l 435 (498)
T KOG4237|consen 356 NPFNCNCRLAWLGEWLRKKSVVGNPRCQSPGFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVRCSNKLL 435 (498)
T ss_pred CcccCccchHHHHHHHhhCCCCCCCCCCCCchhccccchhccccccccCCccccCCCCCCCCCCCcchhhhhHhhcccch
Confidence 876410 00000 111245566666655432 1222221 1112222 22333333
Q ss_pred CccCCCCcccccceeeccccccccchhhhhccCCCCCEEecccCcCccccchhccCCCCCCeeeCcCC
Q 003296 376 SGTIPMMPPRLQIALNLSSNLFEGPIPTTFARLNGLEVLDLSNNRFSGEIPQLLAQMPTLTQLLLTNN 443 (833)
Q Consensus 376 ~~~~p~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N 443 (833)
. .+|.-.+.-...+++.+|.++. +|.. .+.+| .+|+++|+++...-..|.+++.|.+|-+|+|
T Consensus 436 k-~lp~~iP~d~telyl~gn~~~~-vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 436 K-LLPRGIPVDVTELYLDGNAITS-VPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred h-hcCCCCCchhHHHhcccchhcc-cCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 2 3333333333568889999884 4544 55677 8999999998777778888999988888876
No 410
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.95 E-value=2.6e-27 Score=241.71 Aligned_cols=200 Identities=26% Similarity=0.291 Sum_probs=171.0
Q ss_pred cCCccccccCcccEEEEEEcCC-CceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEe
Q 003296 557 ANPLNVELKTRFSTYYKAVMPS-GMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYE 635 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 635 (833)
|+..+.||+|++|.||+|...+ ++.+|+|.+...... ...+.+.+|++.+++++|+|++++++++...+..++|+|
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 77 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE---KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVME 77 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch---HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEe
Confidence 4556789999999999999864 899999999532211 135789999999999999999999999999999999999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCC
Q 003296 636 YAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS 715 (833)
Q Consensus 636 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~ 715 (833)
|+++++|.+++..... .+++.....++.+++.++.|+| ..+++|+|++|+||+++.++.++++|||.+........
T Consensus 78 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~ 153 (225)
T smart00221 78 YCEGGDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLH---SLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA 153 (225)
T ss_pred ccCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc
Confidence 9999999999986322 1899999999999999999999 77999999999999999999999999999987754321
Q ss_pred CCccccccccccccccccc-cCCcccccCcchhhHHHHHHHHhCCCcccC
Q 003296 716 TGSLSTVAGSVGYIPPEYA-YTMRVTMAGNVYSFGVILLELLTGKTAVNQ 764 (833)
Q Consensus 716 ~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~ 764 (833)
.......++..|++||.. ....++.++||||||++++||++|+.||..
T Consensus 154 -~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 154 -ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred -ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 112345788899999998 666788899999999999999999999965
No 411
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.95 E-value=5.5e-28 Score=231.55 Aligned_cols=251 Identities=18% Similarity=0.230 Sum_probs=188.5
Q ss_pred HHHHhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEE-EecCC
Q 003296 552 AMEAVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAY-VLASD 628 (833)
Q Consensus 552 ~~~~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~-~~~~~ 628 (833)
...+.|++.+.+|+|.||.+-.|.++ +.+.+|+|.+... ....++|.+|...--.+ .|.|||.-|+. |+..+
T Consensus 21 ~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-----~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d 95 (378)
T KOG1345|consen 21 DLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-----QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSD 95 (378)
T ss_pred chhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-----hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCc
Confidence 34567888899999999999999974 7889999998422 22467899999876566 48999998755 67778
Q ss_pred ceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeC--CCCCceecccee
Q 003296 629 SAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLK--SLKEPQIGDIEL 706 (833)
Q Consensus 629 ~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~--~~~~~ki~dfgl 706 (833)
.++.++||+|.|||.+-+.. ..+.+...+.++.|+++|+.|+| +..+||||||.+|||+- +...+|++|||.
T Consensus 96 ~YvF~qE~aP~gdL~snv~~---~GigE~~~K~v~~ql~SAi~fMH---sknlVHRdlK~eNiLif~~df~rvKlcDFG~ 169 (378)
T KOG1345|consen 96 AYVFVQEFAPRGDLRSNVEA---AGIGEANTKKVFAQLLSAIEFMH---SKNLVHRDLKAENILIFDADFYRVKLCDFGL 169 (378)
T ss_pred eEEEeeccCccchhhhhcCc---ccccHHHHHHHHHHHHHHHHHhh---ccchhhcccccceEEEecCCccEEEeeeccc
Confidence 89999999999999988764 45888889999999999999999 88999999999999993 345899999998
Q ss_pred eeeeCCCCCCCccccccccccccccccccC---Cc--ccccCcchhhHHHHHHHHhCCCcccCC----ccHHHHHHHhhc
Q 003296 707 CKVIDPSKSTGSLSTVAGSVGYIPPEYAYT---MR--VTMAGNVYSFGVILLELLTGKTAVNQG----NELAKWVLRNSA 777 (833)
Q Consensus 707 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~--~~~~~Dv~S~Gvvl~elltg~~p~~~~----~~~~~~~~~~~~ 777 (833)
.+..+..- ...--+..|-|||.... ++ ..+.+|||.||+++|.++||+.||... .....|......
T Consensus 170 t~k~g~tV-----~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~r 244 (378)
T KOG1345|consen 170 TRKVGTTV-----KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKR 244 (378)
T ss_pred ccccCcee-----hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcc
Confidence 87543211 12234567899997642 33 468899999999999999999999732 233344333222
Q ss_pred ccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 003296 778 QQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRML 829 (833)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L 829 (833)
... ..+..+......++++..+-+.++|++|-...++.++-
T Consensus 245 k~~-----------~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~r 285 (378)
T KOG1345|consen 245 KNP-----------ALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMR 285 (378)
T ss_pred cCc-----------cCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHH
Confidence 211 11112233455677888899999999997766666543
No 412
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.95 E-value=6.6e-28 Score=246.35 Aligned_cols=263 Identities=22% Similarity=0.273 Sum_probs=194.6
Q ss_pred HHHHhcCCccccccCcccEEEEEEcC----CCceEEEEEccccchhhhccChhHHHHHHHHHhcCC-CCCcccceEEEec
Q 003296 552 AMEAVANPLNVELKTRFSTYYKAVMP----SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLS-NSNVMTPLAYVLA 626 (833)
Q Consensus 552 ~~~~~~~~~~~ig~g~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~~~~~~ 626 (833)
...+.|...+.||+|.|++||+|.+. ....||+|.+... ........|++.|..+. |.||+++.+++..
T Consensus 33 ~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t------s~p~ri~~El~~L~~~gG~~ni~~~~~~~rn 106 (418)
T KOG1167|consen 33 FISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT------SSPSRILNELEMLYRLGGSDNIIKLNGCFRN 106 (418)
T ss_pred hhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc------cCchHHHHHHHHHHHhccchhhhcchhhhcc
Confidence 55677889999999999999999963 4688999999422 23467899999999996 8999999999999
Q ss_pred CCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCC-CCCceeccce
Q 003296 627 SDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKS-LKEPQIGDIE 705 (833)
Q Consensus 627 ~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~-~~~~ki~dfg 705 (833)
++..++|+||++.-+..++..+ ++...+..++..+..||+|+| ..+||||||||+|+|.+. .+.-.+.|||
T Consensus 107 nd~v~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h---~~GIvHRDiKpsNFL~n~~t~rg~LvDFg 178 (418)
T KOG1167|consen 107 NDQVAIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLH---KNGIVHRDIKPSNFLYNRRTQRGVLVDFG 178 (418)
T ss_pred CCeeEEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhh---ccCccccCCCccccccccccCCceEEech
Confidence 9999999999999888888764 778888999999999999999 899999999999999984 4567899999
Q ss_pred eeeeeC-----------------C-CC-------------CC-----------CccccccccccccccccccC-Cccccc
Q 003296 706 LCKVID-----------------P-SK-------------ST-----------GSLSTVAGSVGYIPPEYAYT-MRVTMA 742 (833)
Q Consensus 706 l~~~~~-----------------~-~~-------------~~-----------~~~~~~~gt~~y~aPE~~~~-~~~~~~ 742 (833)
+|...+ + .. .. ..-...+||+||.|||++.. ..-+++
T Consensus 179 LA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qtta 258 (418)
T KOG1167|consen 179 LAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTA 258 (418)
T ss_pred hHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCc
Confidence 986211 0 00 00 00012479999999999864 457899
Q ss_pred CcchhhHHHHHHHHhCCCcccCCc----cHHHHHH--------Hhhccccc--ccc------c---------cc-ccccC
Q 003296 743 GNVYSFGVILLELLTGKTAVNQGN----ELAKWVL--------RNSAQQDK--LDH------I---------LD-FNVSR 792 (833)
Q Consensus 743 ~Dv~S~Gvvl~elltg~~p~~~~~----~~~~~~~--------~~~~~~~~--~~~------~---------~~-~~~~~ 792 (833)
+||||.|||++-+++++.||.... .+.+.+. ......+. +.+ + ++ ..+..
T Consensus 259 iDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~ 338 (418)
T KOG1167|consen 259 IDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYK 338 (418)
T ss_pred cceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccc
Confidence 999999999999999999986221 1111111 11111111 000 0 00 00000
Q ss_pred ------CchhHH-HHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 793 ------TSLAVR-SQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 793 ------~~~~~~-~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
...... ..+..+.+++.+|++.||.+|.|++|.++|
T Consensus 339 ~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 339 SRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred ccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 000011 123368899999999999999999999876
No 413
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.95 E-value=2.8e-28 Score=293.35 Aligned_cols=197 Identities=17% Similarity=0.165 Sum_probs=144.6
Q ss_pred cCCC-CCcccceEEE-------ecCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCee
Q 003296 611 KLSN-SNVMTPLAYV-------LASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPIL 682 (833)
Q Consensus 611 ~l~H-~niv~~~~~~-------~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~ii 682 (833)
.++| +||++++++| ...+.++.++||+ +++|+++++.. ...+++.+++.++.||++||+||| +.+||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH---~~gIv 102 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAH---SQGIV 102 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHH---hCCee
Confidence 4456 6888999988 3335678889988 55999999753 346999999999999999999999 78999
Q ss_pred ecCCCccceeeCC-------------------CCCceeccceeeeeeCCCCC--------------CCcccccccccccc
Q 003296 683 LLDLSTRNIFLKS-------------------LKEPQIGDIELCKVIDPSKS--------------TGSLSTVAGSVGYI 729 (833)
Q Consensus 683 Hrdlk~~Nill~~-------------------~~~~ki~dfgl~~~~~~~~~--------------~~~~~~~~gt~~y~ 729 (833)
||||||+|||++. ++.+|++|||+++....... .......+||+.||
T Consensus 103 HrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 182 (793)
T PLN00181 103 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYT 182 (793)
T ss_pred eccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceE
Confidence 9999999999953 45677888888764321000 00012246899999
Q ss_pred ccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchhHHHHHHHHHHHHH
Q 003296 730 PPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAV 809 (833)
Q Consensus 730 aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 809 (833)
|||++.+..|+.++|||||||++|||++|.+|+........... . ....+. ......+..+++.
T Consensus 183 APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~----~-----~~~~~~-------~~~~~~~~~~~~~ 246 (793)
T PLN00181 183 SPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLR----H-----RVLPPQ-------ILLNWPKEASFCL 246 (793)
T ss_pred ChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHH----H-----hhcChh-------hhhcCHHHHHHHH
Confidence 99999999999999999999999999999988753221111000 0 001100 0112234567888
Q ss_pred hccCCCCCCCCCHHHHHHH
Q 003296 810 ACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 810 ~cl~~dP~~Rps~~evl~~ 828 (833)
+||++||.+||+|.||+++
T Consensus 247 ~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 247 WLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred HhCCCChhhCcChHHHhhc
Confidence 9999999999999999875
No 414
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=4.3e-27 Score=242.92 Aligned_cols=132 Identities=19% Similarity=0.156 Sum_probs=112.0
Q ss_pred HhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCC-----C---CCcccceEEEe
Q 003296 555 AVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLS-----N---SNVMTPLAYVL 625 (833)
Q Consensus 555 ~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----H---~niv~~~~~~~ 625 (833)
..|...+.+|-|.|++||.|++ ...+.||+|+.+ ... ...+....||++|++++ | ..||+++++|.
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvK-SAq----hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fk 152 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVK-SAQ----HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFK 152 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEe-hhh----HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccce
Confidence 5567789999999999999997 467889999994 221 23466788999999984 3 36999999998
Q ss_pred cC----CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeC
Q 003296 626 AS----DSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLK 694 (833)
Q Consensus 626 ~~----~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~ 694 (833)
.. .++|+|+||+ |-+|..++.....+.++....++|+.||+.||.|||..| +|||-||||+|||+.
T Consensus 153 hsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 153 HSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLC 222 (590)
T ss_pred ecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeee
Confidence 53 5799999999 669999998876778999999999999999999999854 899999999999984
No 415
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.94 E-value=1.4e-26 Score=226.72 Aligned_cols=166 Identities=18% Similarity=0.149 Sum_probs=127.0
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCcc
Q 003296 640 GTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSL 719 (833)
Q Consensus 640 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~~ 719 (833)
|+|.++++.. +..++|.++..|+.|+++||+||| +.+ ||+||+++.++.+|+ ||+++.....
T Consensus 1 GsL~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~lH---~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~------ 62 (176)
T smart00750 1 VSLADILEVR-GRPLNEEEIWAVCLQCLRALRELH---RQA------KSGNILLTWDGLLKL--DGSVAFKTPE------ 62 (176)
T ss_pred CcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHH---hcC------CcccEeEcCccceee--ccceEeeccc------
Confidence 7999999853 346999999999999999999999 433 999999999999999 9999876432
Q ss_pred ccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchhHHH
Q 003296 720 STVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRS 799 (833)
Q Consensus 720 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (833)
...||+.|||||++.+..|+.++|||||||++|||+||+.||.................... ++... .....
T Consensus 63 -~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~---~~~~~ 134 (176)
T smart00750 63 -QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPAD----DPRDR---SNLES 134 (176)
T ss_pred -cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccC----Ccccc---ccHHH
Confidence 12689999999999999999999999999999999999999975444333222211110000 00000 01112
Q ss_pred HH--HHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 003296 800 QM--LTVLKVAVACVSVSPEARPKMKSVLRMLLN 831 (833)
Q Consensus 800 ~~--~~~~~l~~~cl~~dP~~Rps~~evl~~L~~ 831 (833)
.. .++.+++.+||+.||++||++.|+++++..
T Consensus 135 ~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~ 168 (176)
T smart00750 135 VSAARSFADFMRVCASRLPQRREAANHYLAHCRA 168 (176)
T ss_pred HHhhhhHHHHHHHHHhcccccccCHHHHHHHHHH
Confidence 22 268899999999999999999999999764
No 416
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.93 E-value=4.8e-28 Score=243.76 Aligned_cols=397 Identities=25% Similarity=0.277 Sum_probs=256.2
Q ss_pred CCCEEECCCCCCCCcc--cccCCCCCCEEECCCCCCCCcccccccCCCCCCEEeCcC-CcCCCCCCcccCCCCCCCEEEc
Q 003296 9 GLKLLNFSKNELVSLP--TFNGFAGLEVLDFSSNNLNGNINLQFDELVSLKSLNLSK-NKFNGFLPINLGKTKALEELVL 85 (833)
Q Consensus 9 ~L~~L~ls~N~l~~i~--~f~~l~~L~~L~Ls~N~l~~~~~~~f~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L 85 (833)
+...++|..|+|+.|| +|..+++|+.||||+|+|+.|.|++|.++.+|..|-+-+ |+|+.+....|++|..|+.|.+
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLll 147 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLL 147 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhc
Confidence 4567999999999997 599999999999999999999999999999998887766 9999998999999999999999
Q ss_pred cCCcCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCcEEECcCCcCC------------CCCCcccccCCccC
Q 003296 86 SGNAFHGEIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLD------------GRLPTSLASITTLS 153 (833)
Q Consensus 86 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~------------~~~p~~~~~l~~L~ 153 (833)
.-|++.-+..+.|..+++|..|.|..|.+..+...+|..+..++.+.+..|.+- ...|..++......
T Consensus 148 Nan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~ 227 (498)
T KOG4237|consen 148 NANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVS 227 (498)
T ss_pred ChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecc
Confidence 999999999999999999999999999999777779999999999999999842 22334444444444
Q ss_pred ccccccccccccCChhhhhcCCEE--ec-ccccccccCC-ccCCCCCCCCEEecccccCcccCCCCCC--cCCcEEEcCC
Q 003296 154 RFAANQNKFSGSVPGGITRFLRNL--DL-SYNKLLGVIP-IDLLSHPNLQTIDLSVNMLEGSLPQNMS--PNLVRLRLGT 227 (833)
Q Consensus 154 ~l~l~~n~l~~~~p~~~~~~L~~L--~L-s~N~l~~~~~-~~~~~~~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l~~ 227 (833)
...+.++++...-+..+...++.+ .+ +.+...+..| ..|..+++|+.|+|++|+++++-+.+|. ..++.|.+..
T Consensus 228 p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~ 307 (498)
T KOG4237|consen 228 PYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTR 307 (498)
T ss_pred hHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCc
Confidence 444444444433333332222222 11 1222223333 3367788888888888888765555553 4556666666
Q ss_pred ccccCCCCccccCCCCCCCEEECCCCCCCCCCCccccCCCCCcEEEccCCccCCCChh-hhCCCCCCcEEEccCCcCCCc
Q 003296 228 NLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNGSLPI-QLGSLGILQVMNLQLNKLSGE 306 (833)
Q Consensus 228 n~l~~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~ 306 (833)
|++. .+....|.++..|+.|+|.+|+|+...|.+|..+.+|.+|+|-.|.+.-.-.. +++. .|..+.-.|.
T Consensus 308 N~l~-~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~-------Wlr~~~~~~~ 379 (498)
T KOG4237|consen 308 NKLE-FVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGE-------WLRKKSVVGN 379 (498)
T ss_pred chHH-HHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHH-------HHhhCCCCCC
Confidence 6543 35555666666666666666666666666666666666666666655311000 0000 0111111111
Q ss_pred CchhhcCCCcCceeeccCCcCcc---cCcccc---------ccCCCCCEEEccCCccccccCccccCCCCCCEEEccCCc
Q 003296 307 IPSQFSQLKLLSTMNISWNSLSG---SIPSFL---------SNLTNLVNLNLRQNNLNGSIPNSITNMRSLIELQLGGNQ 374 (833)
Q Consensus 307 ~p~~~~~l~~L~~L~Ls~N~l~~---~~~~~~---------~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 374 (833)
.| ...-..++.+.++++.+.. ..|+.. ..++-+.+..=-.|+....+|..+ ...-.+|++.+|.
T Consensus 380 ~~--Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~lk~lp~~i--P~d~telyl~gn~ 455 (498)
T KOG4237|consen 380 PR--CQSPGFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVRCSNKLLKLLPRGI--PVDVTELYLDGNA 455 (498)
T ss_pred CC--CCCCchhccccchhccccccccCCccccCCCCCCCCCCCcchhhhhHhhcccchhhcCCCC--CchhHHHhcccch
Confidence 11 1122234455555544321 111111 112223322222222222444322 1234578888888
Q ss_pred CCccCCCCcccccceeeccccccccchhhhhccCCCCCEEecccC
Q 003296 375 LSGTIPMMPPRLQIALNLSSNLFEGPIPTTFARLNGLEVLDLSNN 419 (833)
Q Consensus 375 l~~~~p~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 419 (833)
++ .+|....... .+|+|+|.++..--.+|.+++.|.+|-+|+|
T Consensus 456 ~~-~vp~~~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 456 IT-SVPDELLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred hc-ccCHHHHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 86 3444322222 6888999988777788999999999999886
No 417
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.92 E-value=7.9e-26 Score=216.49 Aligned_cols=247 Identities=19% Similarity=0.283 Sum_probs=186.8
Q ss_pred cccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEeeCCCC
Q 003296 561 NVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKG 640 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey~~~g 640 (833)
..+.+...|..|+|++. |..+++|+++... ......++|..|.-.|+-+.||||..++|.|..+....++..|||-|
T Consensus 196 tkl~e~hsgelwrgrwq-gndivakil~vr~--~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~g 272 (448)
T KOG0195|consen 196 TKLAESHSGELWRGRWQ-GNDIVAKILNVRE--VTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFG 272 (448)
T ss_pred hhhccCCCccccccccc-Ccchhhhhhhhhh--cchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccch
Confidence 35667788999999984 4556667774221 12223468999999999999999999999999999999999999999
Q ss_pred ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceec--cceeeeeeCCCCCCCc
Q 003296 641 TLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIG--DIELCKVIDPSKSTGS 718 (833)
Q Consensus 641 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~--dfgl~~~~~~~~~~~~ 718 (833)
+|+.+||+.....++..++.++|.++|+|++|||+.. +-|.---+.+..|++|++.++||+ |-.++- .+
T Consensus 273 slynvlhe~t~vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltarismad~kfsf----qe---- 343 (448)
T KOG0195|consen 273 SLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISMADTKFSF----QE---- 343 (448)
T ss_pred HHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheecccceeee----ec----
Confidence 9999999877777899999999999999999999752 224444788999999999999875 322211 11
Q ss_pred cccccccccccccccccCCccc---ccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCch
Q 003296 719 LSTVAGSVGYIPPEYAYTMRVT---MAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSL 795 (833)
Q Consensus 719 ~~~~~gt~~y~aPE~~~~~~~~---~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (833)
.+..-.|.||+||.+...+-+ .++|+|||.|++||+.|...||.+-..+..=..... +.++.-+.+
T Consensus 344 -~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkial---eglrv~ipp------- 412 (448)
T KOG0195|consen 344 -VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIAL---EGLRVHIPP------- 412 (448)
T ss_pred -cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhh---ccccccCCC-------
Confidence 123447899999998765533 689999999999999999999986544332111111 111111111
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhcC
Q 003296 796 AVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNAR 833 (833)
Q Consensus 796 ~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~r 833 (833)
..+..+.+++.-|...||.+||.+..|+-.|+.++
T Consensus 413 ---gis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 413 ---GISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred ---CccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 23456778889999999999999999999998764
No 418
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.92 E-value=1.8e-23 Score=259.29 Aligned_cols=353 Identities=21% Similarity=0.281 Sum_probs=263.1
Q ss_pred CCCEEECCCCCCCCc----ccccCCCCCCEEECCCCC------CCCcccccccCCC-CCCEEeCcCCcCCCCCCcccCCC
Q 003296 9 GLKLLNFSKNELVSL----PTFNGFAGLEVLDFSSNN------LNGNINLQFDELV-SLKSLNLSKNKFNGFLPINLGKT 77 (833)
Q Consensus 9 ~L~~L~ls~N~l~~i----~~f~~l~~L~~L~Ls~N~------l~~~~~~~f~~l~-~L~~L~Ls~N~l~~~~p~~~~~l 77 (833)
..+-+.+.-..+..+ .+|.++.+|+.|.+..+. +....|..|..++ +|+.|++.+|.++. +|..| ..
T Consensus 533 ~v~~i~l~~~~~~~~~i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~~-lP~~f-~~ 610 (1153)
T PLN03210 533 KVLGITLDIDEIDELHIHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLRC-MPSNF-RP 610 (1153)
T ss_pred eeeEEEeccCccceeeecHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCCC-CCCcC-Cc
Confidence 344444444444443 258899999999997664 3334566777775 69999999999874 56667 46
Q ss_pred CCCCEEEccCCcCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCcEEECcCCcCCCCCCcccccCCccCcccc
Q 003296 78 KALEELVLSGNAFHGEIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAA 157 (833)
Q Consensus 78 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l 157 (833)
.+|++|+|++|++. .++..+..+++|+.|+|++|.....+| .++.+++|++|+|++|.....+|.++..+++|+.|++
T Consensus 611 ~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L 688 (1153)
T PLN03210 611 ENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDM 688 (1153)
T ss_pred cCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeC
Confidence 88999999999988 567888899999999999876544566 4888999999999998777788999999999999999
Q ss_pred ccccccccCChhh-hhcCCEEecccccccccCCccCCCCCCCCEEecccccCcccCCCCCC-cCCcEEEcCCcccc----
Q 003296 158 NQNKFSGSVPGGI-TRFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMS-PNLVRLRLGTNLLI---- 231 (833)
Q Consensus 158 ~~n~l~~~~p~~~-~~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~-~~L~~L~l~~n~l~---- 231 (833)
++|.....+|..+ .+.|+.|+|++|.....+|.. ..+|+.|+|++|.+. .+|..+. ++|..|.+..+...
T Consensus 689 ~~c~~L~~Lp~~i~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~~l~~L~~L~l~~~~~~~l~~ 764 (1153)
T PLN03210 689 SRCENLEILPTGINLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNLRLENLDELILCEMKSEKLWE 764 (1153)
T ss_pred CCCCCcCccCCcCCCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccccccccccccccccchhhccc
Confidence 9876666777654 567899999988766555532 467889999999886 4555443 67777777653211
Q ss_pred --CCCCccccCCCCCCCEEECCCCCCCCCCCccccCCCCCcEEEccCCccCCCChhhhCCCCCCcEEEccCCcCCCcCch
Q 003296 232 --GEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNGSLPIQLGSLGILQVMNLQLNKLSGEIPS 309 (833)
Q Consensus 232 --~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 309 (833)
..+++..+...++|+.|+|++|...+.+|..++++++|+.|+|++|...+.+|..+ .+++|+.|++++|.....+|.
T Consensus 765 ~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~ 843 (1153)
T PLN03210 765 RVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPD 843 (1153)
T ss_pred cccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCccccccc
Confidence 11122223345688889999888777888888889999999998876555677655 678888899888765555554
Q ss_pred hhcCCCcCceeeccCCcCcccCccccccCCCCCEEEccCCccccccCccccCCCCCCEEEccCCc
Q 003296 310 QFSQLKLLSTMNISWNSLSGSIPSFLSNLTNLVNLNLRQNNLNGSIPNSITNMRSLIELQLGGNQ 374 (833)
Q Consensus 310 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 374 (833)
. ..+|+.|+|++|.++ .+|..+..+++|+.|+|++|+--..+|..+..+++|+.+++++|.
T Consensus 844 ~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 844 I---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred c---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCc
Confidence 3 357888889888887 577788888889999988844334567777888888888888885
No 419
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.92 E-value=7.8e-25 Score=233.21 Aligned_cols=170 Identities=16% Similarity=0.093 Sum_probs=130.0
Q ss_pred HHHHhcCCccccccCcccEEEEEEcC--CCceEEEEEccccchh-hhccChhHHHHHHHHHhcCCCCCcccceEEEecCC
Q 003296 552 AMEAVANPLNVELKTRFSTYYKAVMP--SGMSYFIKKLNWSDKI-FQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASD 628 (833)
Q Consensus 552 ~~~~~~~~~~~ig~g~~g~vy~~~~~--~~~~vavK~~~~~~~~-~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~ 628 (833)
.....|...+.||+|+||+||+|... +|+.||||++...... ......+.|.+|+++|++++|+|||+.+.. .+
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~ 91 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TG 91 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cC
Confidence 45567888999999999999999864 6788899987311000 011234679999999999999999963322 24
Q ss_pred ceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCC-CccceeeCCCCCceeccceee
Q 003296 629 SAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDL-STRNIFLKSLKEPQIGDIELC 707 (833)
Q Consensus 629 ~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdl-k~~Nill~~~~~~ki~dfgl~ 707 (833)
..|+|||||++++|... .. .. ...++.|+++||+||| +.+|+|||| ||+|||++.++.+||+|||+|
T Consensus 92 ~~~LVmE~~~G~~L~~~-~~--~~------~~~~~~~i~~aL~~lH---~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA 159 (365)
T PRK09188 92 KDGLVRGWTEGVPLHLA-RP--HG------DPAWFRSAHRALRDLH---RAGITHNDLAKPQNWLMGPDGEAAVIDFQLA 159 (365)
T ss_pred CcEEEEEccCCCCHHHh-Cc--cc------hHHHHHHHHHHHHHHH---HCCCeeCCCCCcceEEEcCCCCEEEEECccc
Confidence 68999999999999732 11 11 1457889999999999 789999999 999999999999999999999
Q ss_pred eeeCCCCCCC------ccccccccccccccccccC
Q 003296 708 KVIDPSKSTG------SLSTVAGSVGYIPPEYAYT 736 (833)
Q Consensus 708 ~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~ 736 (833)
+......... ..+...|++.|+|||++..
T Consensus 160 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 160 SVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred eecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 9775432111 1245778999999998753
No 420
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=8.3e-23 Score=253.30 Aligned_cols=347 Identities=21% Similarity=0.262 Sum_probs=201.3
Q ss_pred cccccccCCCCCCEEeCcCCcC------CCCCCcccCCCC-CCCEEEccCCcCcccCCccccCCCCCCEEeccCCcCCcc
Q 003296 45 NINLQFDELVSLKSLNLSKNKF------NGFLPINLGKTK-ALEELVLSGNAFHGEIPKGIADYRNLTLIDLSANNLSGS 117 (833)
Q Consensus 45 ~~~~~f~~l~~L~~L~Ls~N~l------~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 117 (833)
+.+.+|.++.+|+.|.+.++.+ ...+|..|..++ +|+.|++.+|.++ .+|..| ...+|+.|+|++|++. .
T Consensus 549 i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~ 625 (1153)
T PLN03210 549 IHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-K 625 (1153)
T ss_pred ecHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-c
Confidence 4566788999999999876643 334566666654 5888999888887 567666 4688889999988887 4
Q ss_pred CCccccCCCCCcEEECcCCcCCCCCCcccccCCccCccccccccccccCChhhhhcCCEEecccccccccCCccCCCCCC
Q 003296 118 VPDRIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQNKFSGSVPGGITRFLRNLDLSYNKLLGVIPIDLLSHPN 197 (833)
Q Consensus 118 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~ 197 (833)
++..+..+++|+.|+|++|...+.+|. +..+++| +.|+|++|.....+|..+..+++
T Consensus 626 L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~L----------------------e~L~L~~c~~L~~lp~si~~L~~ 682 (1153)
T PLN03210 626 LWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNL----------------------ETLKLSDCSSLVELPSSIQYLNK 682 (1153)
T ss_pred cccccccCCCCCEEECCCCCCcCcCCc-cccCCcc----------------------cEEEecCCCCccccchhhhccCC
Confidence 667778888899999888764445553 4455554 44455444444445555555556
Q ss_pred CCEEecccccCcccCCCCCC-cCCcEEEcCCccccCCCCccccCCCCCCCEEECCCCCCCCCCCccccCCCCCcEEEccC
Q 003296 198 LQTIDLSVNMLEGSLPQNMS-PNLVRLRLGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQ 276 (833)
Q Consensus 198 L~~L~Ls~N~l~~~~p~~~~-~~L~~L~l~~n~l~~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 276 (833)
|+.|++++|..-..+|..+. ++|+.|++++|...+.+|. ..++|+.|+|++|.+.. +|..+ .+++|+.|++.+
T Consensus 683 L~~L~L~~c~~L~~Lp~~i~l~sL~~L~Lsgc~~L~~~p~----~~~nL~~L~L~~n~i~~-lP~~~-~l~~L~~L~l~~ 756 (1153)
T PLN03210 683 LEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKSFPD----ISTNISWLDLDETAIEE-FPSNL-RLENLDELILCE 756 (1153)
T ss_pred CCEEeCCCCCCcCccCCcCCCCCCCEEeCCCCCCcccccc----ccCCcCeeecCCCcccc-ccccc-cccccccccccc
Confidence 66666655432222332211 2333333333322221211 12344444454444432 22222 234444444433
Q ss_pred CccCCCChhhhCCCCCCcEEEccCCcCCCcCchhhcCCCcCceeeccCCcCcccCccccccCCCCCEEEccCCccccccC
Q 003296 277 NELNGSLPIQLGSLGILQVMNLQLNKLSGEIPSQFSQLKLLSTMNISWNSLSGSIPSFLSNLTNLVNLNLRQNNLNGSIP 356 (833)
Q Consensus 277 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 356 (833)
+.... ++ +.+....+..+...++|+.|+|++|...+.+|..++++++|+.|+|++|...+.+|
T Consensus 757 ~~~~~-l~----------------~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP 819 (1153)
T PLN03210 757 MKSEK-LW----------------ERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLP 819 (1153)
T ss_pred cchhh-cc----------------ccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeC
Confidence 22110 00 01111112222334566677777766666666667777777777777665444555
Q ss_pred ccccCCCCCCEEEccCCcCCccCCCCcccccceeeccccccccchhhhhccCCCCCEEecccC-cCccccchhccCCCCC
Q 003296 357 NSITNMRSLIELQLGGNQLSGTIPMMPPRLQIALNLSSNLFEGPIPTTFARLNGLEVLDLSNN-RFSGEIPQLLAQMPTL 435 (833)
Q Consensus 357 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L 435 (833)
..+ ++++|+.|++++|.....+|..+.. ...|+|++|.++ .+|.++..+++|+.|++++| ++. .+|..+..+++|
T Consensus 820 ~~~-~L~sL~~L~Ls~c~~L~~~p~~~~n-L~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L 895 (1153)
T PLN03210 820 TGI-NLESLESLDLSGCSRLRTFPDISTN-ISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHL 895 (1153)
T ss_pred CCC-CccccCEEECCCCCccccccccccc-cCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCC
Confidence 554 5667777777776554445543322 245677777776 46777888888888888874 444 466667778888
Q ss_pred CeeeCcCCc
Q 003296 436 TQLLLTNNQ 444 (833)
Q Consensus 436 ~~L~ls~N~ 444 (833)
+.++++++.
T Consensus 896 ~~L~l~~C~ 904 (1153)
T PLN03210 896 ETVDFSDCG 904 (1153)
T ss_pred CeeecCCCc
Confidence 888887764
No 421
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.90 E-value=7.6e-23 Score=234.95 Aligned_cols=268 Identities=26% Similarity=0.340 Sum_probs=184.0
Q ss_pred CCCCEEECCCCCCCCcccccCCCCCCEEECCCCCCCCcccccccCCCCCCEEeCcCCcCCCCCCcccCCCCCCCEEEccC
Q 003296 8 DGLKLLNFSKNELVSLPTFNGFAGLEVLDFSSNNLNGNINLQFDELVSLKSLNLSKNKFNGFLPINLGKTKALEELVLSG 87 (833)
Q Consensus 8 ~~L~~L~ls~N~l~~i~~f~~l~~L~~L~Ls~N~l~~~~~~~f~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 87 (833)
.+-..|+|++|.|+++|. .-.++|+.|++++|+|+.+.. ..++|++|+|++|+|+.+ |.. .++|+.|+|++
T Consensus 201 ~~~~~LdLs~~~LtsLP~-~l~~~L~~L~L~~N~Lt~LP~----lp~~Lk~LdLs~N~LtsL-P~l---p~sL~~L~Ls~ 271 (788)
T PRK15387 201 NGNAVLNVGESGLTTLPD-CLPAHITTLVIPDNNLTSLPA----LPPELRTLEVSGNQLTSL-PVL---PPGLLELSIFS 271 (788)
T ss_pred CCCcEEEcCCCCCCcCCc-chhcCCCEEEccCCcCCCCCC----CCCCCcEEEecCCccCcc-cCc---ccccceeeccC
Confidence 557789999999999985 123589999999999997543 258999999999999965 432 46899999999
Q ss_pred CcCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCcEEECcCCcCCCCCCcccccCCccCccccccccccccCC
Q 003296 88 NAFHGEIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQNKFSGSVP 167 (833)
Q Consensus 88 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p 167 (833)
|.|+. +|.. ..+|+.|+|++|+|+. +|. .+++|+.|+|++|+|++. |... ..|..|++++|++++ +|
T Consensus 272 N~L~~-Lp~l---p~~L~~L~Ls~N~Lt~-LP~---~p~~L~~LdLS~N~L~~L-p~lp---~~L~~L~Ls~N~L~~-LP 338 (788)
T PRK15387 272 NPLTH-LPAL---PSGLCKLWIFGNQLTS-LPV---LPPGLQELSVSDNQLASL-PALP---SELCKLWAYNNQLTS-LP 338 (788)
T ss_pred Cchhh-hhhc---hhhcCEEECcCCcccc-ccc---cccccceeECCCCccccC-CCCc---ccccccccccCcccc-cc
Confidence 99884 4443 3568899999999985 443 257899999999999863 3322 234445555555542 33
Q ss_pred hhhhhcCCEEecccccccccCCccCCCCCCCCEEecccccCcccCCCCCCcCCcEEEcCCccccCCCCccccCCCCCCCE
Q 003296 168 GGITRFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMSPNLVRLRLGTNLLIGEIPSATFTSLEKLTY 247 (833)
Q Consensus 168 ~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~n~l~~~~~~~~f~~l~~L~~ 247 (833)
. +.. +|+.|+|++|+|++ +|. ...+|..|++++|.+.. +|. ...+|+.
T Consensus 339 ~-lp~------------------------~Lq~LdLS~N~Ls~-LP~-lp~~L~~L~Ls~N~L~~-LP~----l~~~L~~ 386 (788)
T PRK15387 339 T-LPS------------------------GLQELSVSDNQLAS-LPT-LPSELYKLWAYNNRLTS-LPA----LPSGLKE 386 (788)
T ss_pred c-ccc------------------------ccceEecCCCccCC-CCC-CCcccceehhhcccccc-Ccc----cccccce
Confidence 1 222 44455555555442 221 22345555555555432 332 1346888
Q ss_pred EECCCCCCCCCCCccccCCCCCcEEEccCCccCCCChhhhCCCCCCcEEEccCCcCCCcCchhhcCCCcCceeeccCCcC
Q 003296 248 LELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNGSLPIQLGSLGILQVMNLQLNKLSGEIPSQFSQLKLLSTMNISWNSL 327 (833)
Q Consensus 248 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 327 (833)
|+|++|+|++. |.. .++|+.|++++|++++ +|..+ ..|+.|++++|+|+ .+|..+..+++|+.|+|++|.+
T Consensus 387 LdLs~N~Lt~L-P~l---~s~L~~LdLS~N~Lss-IP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~L 457 (788)
T PRK15387 387 LIVSGNRLTSL-PVL---PSELKELMVSGNRLTS-LPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPL 457 (788)
T ss_pred EEecCCcccCC-CCc---ccCCCEEEccCCcCCC-CCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCC
Confidence 88888888853 432 3578888888888874 55432 45778889999988 5788888899999999999999
Q ss_pred cccCccccccC
Q 003296 328 SGSIPSFLSNL 338 (833)
Q Consensus 328 ~~~~~~~~~~l 338 (833)
++..+..+..+
T Consensus 458 s~~~~~~L~~l 468 (788)
T PRK15387 458 SERTLQALREI 468 (788)
T ss_pred CchHHHHHHHH
Confidence 98877766443
No 422
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.89 E-value=1.7e-22 Score=219.46 Aligned_cols=260 Identities=22% Similarity=0.247 Sum_probs=196.7
Q ss_pred cCCccccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCC-CcccceEEEecCCceEEEEe
Q 003296 557 ANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNS-NVMTPLAYVLASDSAYLFYE 635 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~-niv~~~~~~~~~~~~~lv~e 635 (833)
|.....+|.|+||.||++... ..+|+|.+..... ........|.+|+.+++++.|+ +|+++++++......++++|
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLE-SKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhc-cchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 445678999999999999987 8899999942221 1112467899999999999988 79999999987777899999
Q ss_pred eCCCCChhhhhhcCCC-CCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCC-CceeccceeeeeeCCC
Q 003296 636 YAPKGTLFDVLHGCLE-NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLK-EPQIGDIELCKVIDPS 713 (833)
Q Consensus 636 y~~~g~L~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~-~~ki~dfgl~~~~~~~ 713 (833)
|+.++++.+++..... ..++......++.|++.++.|+| ..+++|||+||+||+++... .++++|||.++.....
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H---~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~ 155 (384)
T COG0515 79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDP 155 (384)
T ss_pred cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCC
Confidence 9999999977765321 26888899999999999999999 77899999999999999888 7999999999866443
Q ss_pred CCCC----ccccccccccccccccccC---CcccccCcchhhHHHHHHHHhCCCcccCCcc---HHHHHHHhhccccc-c
Q 003296 714 KSTG----SLSTVAGSVGYIPPEYAYT---MRVTMAGNVYSFGVILLELLTGKTAVNQGNE---LAKWVLRNSAQQDK-L 782 (833)
Q Consensus 714 ~~~~----~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~---~~~~~~~~~~~~~~-~ 782 (833)
.... ......||..|+|||...+ ..++...|+||+|++++++++|..||..... .............. .
T Consensus 156 ~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (384)
T COG0515 156 GSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSL 235 (384)
T ss_pred CccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCccc
Confidence 3221 2356789999999999887 5788999999999999999999999875443 11111111111100 0
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 003296 783 DHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRM 828 (833)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~ 828 (833)
......... ......+.+++.+|+..+|..|.++.+....
T Consensus 236 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 236 ASPLSPSNP------ELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ccccCcccc------chhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 000000000 1223467789999999999999999877653
No 423
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.89 E-value=2.5e-24 Score=244.67 Aligned_cols=258 Identities=17% Similarity=0.158 Sum_probs=191.1
Q ss_pred CCccccccCcccEEEEEEcC-CCceEEEEEcccc--chhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 558 NPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWS--DKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 558 ~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
...+++|.|++|.|+.+... .....+.|....+ ...........+..|..+-.+++|||++..+..+++....+-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 45689999999988888753 4444555543210 11111111223667888889999999999988888877776679
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCC
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK 714 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~ 714 (833)
|||++ ||+..+.. ...+...++..++.|+..|+.|+| ..+|.|||+|++|++++..+.+||+|||.+.......
T Consensus 401 E~~~~-Dlf~~~~~--~~~~~~~e~~c~fKqL~~Gv~y~h---~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~ 474 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMS--NGKLTPLEADCFFKQLLRGVKYLH---SMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPW 474 (601)
T ss_pred hcccH-HHHHHHhc--ccccchhhhhHHHHHHHHHHHHHH---hcCceeccCccccEEEecCCceEEeecCcceeeccCc
Confidence 99999 99999986 235788888999999999999999 8899999999999999999999999999987764333
Q ss_pred CC--CccccccccccccccccccCCccc-ccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccccccccccc
Q 003296 715 ST--GSLSTVAGSVGYIPPEYAYTMRVT-MAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVS 791 (833)
Q Consensus 715 ~~--~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (833)
.. .....++|+..|+|||++.+..|+ ...||||.||++..|++|+.||........... ... .... . ....
T Consensus 475 e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~--~~~--~~~~-~-~~~~ 548 (601)
T KOG0590|consen 475 EKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFK--TNN--YSDQ-R-NIFE 548 (601)
T ss_pred chhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchh--hhc--cccc-c-cccc
Confidence 22 345678999999999999999998 469999999999999999999973222111000 000 0000 0 0011
Q ss_pred CCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 003296 792 RTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLR 827 (833)
Q Consensus 792 ~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~ 827 (833)
.........+.+...++.++++.||.+|.||++|++
T Consensus 549 ~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 549 GPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred ChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 222234456677889999999999999999999986
No 424
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.88 E-value=3.5e-22 Score=229.56 Aligned_cols=268 Identities=24% Similarity=0.311 Sum_probs=195.5
Q ss_pred CCCCEEECCCCCCCCcccccccCCCCCCEEeCcCCcCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEec
Q 003296 30 AGLEVLDFSSNNLNGNINLQFDELVSLKSLNLSKNKFNGFLPINLGKTKALEELVLSGNAFHGEIPKGIADYRNLTLIDL 109 (833)
Q Consensus 30 ~~L~~L~Ls~N~l~~~~~~~f~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 109 (833)
.+-..|||++|+|+.+ |..+. .+|+.|++++|+|+.+ |. .+++|++|+|++|+|+.+ |.. .++|+.|+|
T Consensus 201 ~~~~~LdLs~~~LtsL-P~~l~--~~L~~L~L~~N~Lt~L-P~---lp~~Lk~LdLs~N~LtsL-P~l---p~sL~~L~L 269 (788)
T PRK15387 201 NGNAVLNVGESGLTTL-PDCLP--AHITTLVIPDNNLTSL-PA---LPPELRTLEVSGNQLTSL-PVL---PPGLLELSI 269 (788)
T ss_pred CCCcEEEcCCCCCCcC-Ccchh--cCCCEEEccCCcCCCC-CC---CCCCCcEEEecCCccCcc-cCc---ccccceeec
Confidence 3456788888888754 44443 3788888888888753 33 246778888888887743 432 356777788
Q ss_pred cCCcCCccCCccccCCCCCcEEECcCCcCCCCCCcccccCCccCccccccccccccCChhhhhcCCEEecccccccccCC
Q 003296 110 SANNLSGSVPDRIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQNKFSGSVPGGITRFLRNLDLSYNKLLGVIP 189 (833)
Q Consensus 110 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~~L~~L~Ls~N~l~~~~~ 189 (833)
++|.|+. +|.. .++|+.|+|++|+|+.. |. ....|+.|+|++|++.++ |
T Consensus 270 s~N~L~~-Lp~l---p~~L~~L~Ls~N~Lt~L-P~-------------------------~p~~L~~LdLS~N~L~~L-p 318 (788)
T PRK15387 270 FSNPLTH-LPAL---PSGLCKLWIFGNQLTSL-PV-------------------------LPPGLQELSVSDNQLASL-P 318 (788)
T ss_pred cCCchhh-hhhc---hhhcCEEECcCCccccc-cc-------------------------cccccceeECCCCccccC-C
Confidence 8877764 3332 24577777777777632 22 123477888888888764 3
Q ss_pred ccCCCCCCCCEEecccccCcccCCCCCCcCCcEEEcCCccccCCCCccccCCCCCCCEEECCCCCCCCCCCccccCCCCC
Q 003296 190 IDLLSHPNLQTIDLSVNMLEGSLPQNMSPNLVRLRLGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSL 269 (833)
Q Consensus 190 ~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~n~l~~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 269 (833)
.. ..+|+.|++++|.+++ +|. +..+|+.|++++|++.. +|.. ..+|+.|++++|+|++ +|.. ..+|
T Consensus 319 ~l---p~~L~~L~Ls~N~L~~-LP~-lp~~Lq~LdLS~N~Ls~-LP~l----p~~L~~L~Ls~N~L~~-LP~l---~~~L 384 (788)
T PRK15387 319 AL---PSELCKLWAYNNQLTS-LPT-LPSGLQELSVSDNQLAS-LPTL----PSELYKLWAYNNRLTS-LPAL---PSGL 384 (788)
T ss_pred CC---cccccccccccCcccc-ccc-cccccceEecCCCccCC-CCCC----Ccccceehhhcccccc-Cccc---cccc
Confidence 22 2468889999999975 553 44689999999999875 5542 3678999999999996 4543 3579
Q ss_pred cEEEccCCccCCCChhhhCCCCCCcEEEccCCcCCCcCchhhcCCCcCceeeccCCcCcccCccccccCCCCCEEEccCC
Q 003296 270 TLLNLAQNELNGSLPIQLGSLGILQVMNLQLNKLSGEIPSQFSQLKLLSTMNISWNSLSGSIPSFLSNLTNLVNLNLRQN 349 (833)
Q Consensus 270 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 349 (833)
+.|+|++|+|++ +|.. .++|+.|++++|++++ +|..+ .+|+.|++++|+|+ .+|..+..+++|+.|+|++|
T Consensus 385 ~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N 455 (788)
T PRK15387 385 KELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGN 455 (788)
T ss_pred ceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCCC
Confidence 999999999985 5543 3579999999999996 56533 46788999999998 68999999999999999999
Q ss_pred ccccccCccccCC
Q 003296 350 NLNGSIPNSITNM 362 (833)
Q Consensus 350 ~l~~~~p~~~~~l 362 (833)
+|++..+..+..+
T Consensus 456 ~Ls~~~~~~L~~l 468 (788)
T PRK15387 456 PLSERTLQALREI 468 (788)
T ss_pred CCCchHHHHHHHH
Confidence 9999888777544
No 425
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=4.3e-21 Score=206.05 Aligned_cols=258 Identities=16% Similarity=0.089 Sum_probs=187.2
Q ss_pred hcCCccccccCcccEEEEEEcCCC--ceEEEEEccccchhhhccChhHHHHHHHHHhcCCC----CCcccceEEE-ecCC
Q 003296 556 VANPLNVELKTRFSTYYKAVMPSG--MSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSN----SNVMTPLAYV-LASD 628 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~~~--~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H----~niv~~~~~~-~~~~ 628 (833)
.|.....||+|+||.||.|..... ..+|+|.-..... .....+..|+.++..+.+ +++..+++.. ..++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~----~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~ 94 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELG----SKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTED 94 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEeccc----CCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCc
Confidence 688899999999999999997543 4788887632111 111268889999999873 5888888888 4777
Q ss_pred ceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCC-----CCceecc
Q 003296 629 SAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSL-----KEPQIGD 703 (833)
Q Consensus 629 ~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~-----~~~ki~d 703 (833)
..|+||+.+ |.+|.++......+.++-.+...|+.|++.+|.++| +.+++||||||+|+++... ..+.+.|
T Consensus 95 ~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH---~~G~iHRDiKp~N~~~g~~~~~~~~~~~llD 170 (322)
T KOG1164|consen 95 FNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLH---SKGFIHRDIKPENFVVGQSSRSEVRTLYLLD 170 (322)
T ss_pred eeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHH---hcCcccCCcCHHHeeecCCCCcccceEEEEe
Confidence 899999987 779999886554567999999999999999999999 8899999999999999854 4589999
Q ss_pred ceeee--eeCCCC----CCCc--cccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHh
Q 003296 704 IELCK--VIDPSK----STGS--LSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRN 775 (833)
Q Consensus 704 fgl~~--~~~~~~----~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~ 775 (833)
||+|+ ...... .... .....||..|+++....+...+.+-|+||++-++.|+..|..||.............
T Consensus 171 fGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~ 250 (322)
T KOG1164|consen 171 FGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFE 250 (322)
T ss_pred cCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHH
Confidence 99998 321111 0111 134669999999999999999999999999999999999999996433221111000
Q ss_pred hcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 003296 776 SAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831 (833)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~ 831 (833)
. ......... .. ...+.++.++...+-+.+..++|....+...+++
T Consensus 251 ~---~~~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~ 296 (322)
T KOG1164|consen 251 K---DPRKLLTDR-FG------DLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKD 296 (322)
T ss_pred H---Hhhhhcccc-cc------CCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHH
Confidence 0 000000000 00 0112334445555555788999999988877654
No 426
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.86 E-value=1e-21 Score=227.53 Aligned_cols=247 Identities=24% Similarity=0.383 Sum_probs=163.6
Q ss_pred CCCCEEECCCCCCCCcccccCCCCCCEEECCCCCCCCcccccccCCCCCCEEeCcCCcCCCCCCcccCCCCCCCEEEccC
Q 003296 8 DGLKLLNFSKNELVSLPTFNGFAGLEVLDFSSNNLNGNINLQFDELVSLKSLNLSKNKFNGFLPINLGKTKALEELVLSG 87 (833)
Q Consensus 8 ~~L~~L~ls~N~l~~i~~f~~l~~L~~L~Ls~N~l~~~~~~~f~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 87 (833)
.+.+.|+++++.++.+|.. -.++|+.|+|++|+|+.+....+ .+|++|+|++|+|+.+ |..+. .+|+.|+|++
T Consensus 178 ~~~~~L~L~~~~LtsLP~~-Ip~~L~~L~Ls~N~LtsLP~~l~---~nL~~L~Ls~N~LtsL-P~~l~--~~L~~L~Ls~ 250 (754)
T PRK15370 178 NNKTELRLKILGLTTIPAC-IPEQITTLILDNNELKSLPENLQ---GNIKTLYANSNQLTSI-PATLP--DTIQEMELSI 250 (754)
T ss_pred cCceEEEeCCCCcCcCCcc-cccCCcEEEecCCCCCcCChhhc---cCCCEEECCCCccccC-Chhhh--ccccEEECcC
Confidence 5678999999999999851 24689999999999997655433 5899999999999864 55443 4799999999
Q ss_pred CcCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCcEEECcCCcCCCCCCcccccCCccCccccccccccccCC
Q 003296 88 NAFHGEIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQNKFSGSVP 167 (833)
Q Consensus 88 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p 167 (833)
|.+. .+|..+. .+|+.|+|++|+|+. +|..+. ++|+.|+|++|+|++ +|..+. .+|+.|++++|+++. +|
T Consensus 251 N~L~-~LP~~l~--s~L~~L~Ls~N~L~~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~-LP 320 (754)
T PRK15370 251 NRIT-ELPERLP--SALQSLDLFHNKISC-LPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTA-LP 320 (754)
T ss_pred CccC-cCChhHh--CCCCEEECcCCccCc-cccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCcccc-CC
Confidence 9998 5566654 479999999999984 566553 589999999999885 344332 345566666666653 34
Q ss_pred hhhhhcCCEEecccccccccCCccCCCCCCCCEEecccccCcccCCCCCCcCCcEEEcCCccccCCCCccccCCCCCCCE
Q 003296 168 GGITRFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMSPNLVRLRLGTNLLIGEIPSATFTSLEKLTY 247 (833)
Q Consensus 168 ~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~n~l~~~~~~~~f~~l~~L~~ 247 (833)
..+...|+.|++++|.+++ +|..+. ++|+.|+|++|+++ .+|. .+ .++|+.
T Consensus 321 ~~l~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-----------------------~LP~-~l--p~~L~~ 371 (754)
T PRK15370 321 ETLPPGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-----------------------VLPE-TL--PPTITT 371 (754)
T ss_pred ccccccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-----------------------cCCh-hh--cCCcCE
Confidence 3344445555555555543 232221 34555555555443 2332 12 246777
Q ss_pred EECCCCCCCCCCCccccCCCCCcEEEccCCccCCCChh----hhCCCCCCcEEEccCCcCC
Q 003296 248 LELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNGSLPI----QLGSLGILQVMNLQLNKLS 304 (833)
Q Consensus 248 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~----~~~~l~~L~~L~L~~N~l~ 304 (833)
|+|++|+++.. |..+. .+|+.|++++|++. .+|. .+..++.+..+++.+|.+.
T Consensus 372 LdLs~N~Lt~L-P~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 372 LDVSRNALTNL-PENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred EECCCCcCCCC-CHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 77777777743 43332 35777778888776 3343 3344567788888888876
No 427
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.86 E-value=1.5e-21 Score=191.70 Aligned_cols=144 Identities=18% Similarity=0.142 Sum_probs=109.7
Q ss_pred ccccccCcccEEEEEEcCCCceEEEEEccccchhhhc-----cChhH-----------------HHHHHHHHhcCCCCCc
Q 003296 560 LNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQL-----GSHHK-----------------FDKELEVLGKLSNSNV 617 (833)
Q Consensus 560 ~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~-----~~~~~-----------------~~~E~~~l~~l~H~ni 617 (833)
...||+|+||.||+|..++|+.||||+++........ ..... ..+|++++.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 3579999999999999889999999999532111000 00112 2459999999998887
Q ss_pred ccceEEEecCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCC
Q 003296 618 MTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLK 697 (833)
Q Consensus 618 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~ 697 (833)
.....+.. ...++||||++++++...... ...+++.+...++.|++.+|.|+|+ ..+|+||||||+||+++ ++
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~l~H--~~giiHrDlkP~NIli~-~~ 154 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLK--DAPLSESKARELYLQVIQIMRILYQ--DCRLVHADLSEYNLLYH-DG 154 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhh--cCCCCHHHHHHHHHHHHHHHHHHHH--hCCcccCCCCHHHEEEE-CC
Confidence 55444332 234899999999877654322 3468899999999999999999932 67899999999999998 47
Q ss_pred Cceeccceeeeee
Q 003296 698 EPQIGDIELCKVI 710 (833)
Q Consensus 698 ~~ki~dfgl~~~~ 710 (833)
.++++|||+|...
T Consensus 155 ~v~LiDFG~a~~~ 167 (190)
T cd05147 155 KLYIIDVSQSVEH 167 (190)
T ss_pred cEEEEEccccccC
Confidence 8999999998754
No 428
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.85 E-value=2.6e-21 Score=209.24 Aligned_cols=213 Identities=22% Similarity=0.363 Sum_probs=159.7
Q ss_pred HhcCCCCCcccceEEEecCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCe-eecCCC
Q 003296 609 LGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPI-LLLDLS 687 (833)
Q Consensus 609 l~~l~H~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~i-iHrdlk 687 (833)
|+.+.|.|+.+++|.+.++...+.|.+||+.|+|.|.+... ...++|.-....+.++++||+|+|+ .+| .|+.++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~-~~~~d~~F~~s~~rdi~~Gl~ylh~---s~i~~hg~l~ 76 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE-DIKLDYFFILSFIRDISKGLAYLHN---SPIGYHGALK 76 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc-ccCccHHHHHHHHHHHHHHHHHHhc---Ccceeeeeec
Confidence 46789999999999999999999999999999999999863 4579999999999999999999994 444 999999
Q ss_pred ccceeeCCCCCceeccceeeeeeCCCCCCCccccccccccccccccccCCc-------ccccCcchhhHHHHHHHHhCCC
Q 003296 688 TRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMR-------VTMAGNVYSFGVILLELLTGKT 760 (833)
Q Consensus 688 ~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-------~~~~~Dv~S~Gvvl~elltg~~ 760 (833)
++|+++|..+.+|++|||+.................-..-|.|||.+.... .+.++||||||++++|+++.+.
T Consensus 77 s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~ 156 (484)
T KOG1023|consen 77 SSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSG 156 (484)
T ss_pred cccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccC
Confidence 999999999999999999987764211111111222345699999887531 4678999999999999999999
Q ss_pred cccCCccH---HHHHHHhhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhc
Q 003296 761 AVNQGNEL---AKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLNA 832 (833)
Q Consensus 761 p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~~ 832 (833)
||+..... .+.+..... .......|.+. ...+...++..++.+||..+|++||++++|-..++.+
T Consensus 157 ~~~~~~~~~~~~eii~~~~~---~~~~~~rP~i~----~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~ 224 (484)
T KOG1023|consen 157 PFDLRNLVEDPDEIILRVKK---GGSNPFRPSIE----LLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTI 224 (484)
T ss_pred ccccccccCChHHHHHHHHh---cCCCCcCcchh----hhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhh
Confidence 99843221 122222111 01111111111 1113334688999999999999999999998877654
No 429
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.85 E-value=1.6e-22 Score=217.63 Aligned_cols=227 Identities=20% Similarity=0.197 Sum_probs=178.2
Q ss_pred ccccCcccEEEEEEc----CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCC-CCCcccceEEEecCCceEEEEee
Q 003296 562 VELKTRFSTYYKAVM----PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLS-NSNVMTPLAYVLASDSAYLFYEY 636 (833)
Q Consensus 562 ~ig~g~~g~vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~~~~lv~ey 636 (833)
++|+|+||.|+.+.- +.|..+|.|..+++..... .......|..++..++ ||.+|++...++.+...+++++|
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~--~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~ 78 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVR--DRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDF 78 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccc--cccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhh
Confidence 478999999987652 4678899999854332222 2226677889999997 99999999999999999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCC
Q 003296 637 APKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKST 716 (833)
Q Consensus 637 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~ 716 (833)
..+|+|...+.. ....+......+...+|-|++++| +.+|+|||+|++||+++.+|++|+.|||+++..-..+
T Consensus 79 ~rgg~lft~l~~--~~~f~~~~~~~~~aelaLald~lh---~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~-- 151 (612)
T KOG0603|consen 79 LRGGDLFTRLSK--EVMFDELDVAFYLAELALALDHLH---KLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK-- 151 (612)
T ss_pred cccchhhhcccc--CCchHHHHHHHHHHHHHHHHhhcc---hhHHHHhcccccceeecccCccccCCchhhhHhHhhh--
Confidence 999999998876 344666677778888999999999 8899999999999999999999999999998764333
Q ss_pred CccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchh
Q 003296 717 GSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLA 796 (833)
Q Consensus 717 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (833)
..|||..|||||++. ....++|+|||||+++||+||..||.. +. ....... . ...
T Consensus 152 ----~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~--~~---~~~Il~~----------~----~~~ 206 (612)
T KOG0603|consen 152 ----IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG--DT---MKRILKA----------E----LEM 206 (612)
T ss_pred ----hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch--HH---HHHHhhh----------c----cCC
Confidence 228999999999988 467899999999999999999999975 11 1111110 0 111
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCH
Q 003296 797 VRSQMLTVLKVAVACVSVSPEARPKM 822 (833)
Q Consensus 797 ~~~~~~~~~~l~~~cl~~dP~~Rps~ 822 (833)
+......+.+++..+...+|..|.-.
T Consensus 207 p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 207 PRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred chhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 22344556677778888888888644
No 430
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.84 E-value=2.3e-21 Score=191.54 Aligned_cols=176 Identities=11% Similarity=0.070 Sum_probs=134.1
Q ss_pred HHHHHhcCCccccccCcccEEEEEEcCCCceEEEEEccccchhhhccCh------hHHHHHHHHHhcCCCCCcccceEEE
Q 003296 551 KAMEAVANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSH------HKFDKELEVLGKLSNSNVMTPLAYV 624 (833)
Q Consensus 551 ~~~~~~~~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~------~~~~~E~~~l~~l~H~niv~~~~~~ 624 (833)
+.....|...+++|.|+||.||.... ++..+|||.+..... ...... +.|.+|++.+.+++||+|..+.+++
T Consensus 27 ~~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~-~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~ 104 (232)
T PRK10359 27 DFLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVK-RTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFY 104 (232)
T ss_pred HHhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcC-chHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEee
Confidence 34567889999999999999999765 677899999953221 111111 2268999999999999999999986
Q ss_pred ecC--------CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCC
Q 003296 625 LAS--------DSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSL 696 (833)
Q Consensus 625 ~~~--------~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~ 696 (833)
... +..++||||++|.+|.++.. ++. ....+++.++..+| ..+++|||+||+||+++.+
T Consensus 105 ~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH---~~gi~H~Dikp~Nili~~~ 171 (232)
T PRK10359 105 LLAERKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLH---QHGMVSGDPHKGNFIVSKN 171 (232)
T ss_pred eecccccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHH---HcCCccCCCChHHEEEeCC
Confidence 643 35899999999999988732 222 24568999999999 8899999999999999988
Q ss_pred CCceeccceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHH
Q 003296 697 KEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELL 756 (833)
Q Consensus 697 ~~~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ell 756 (833)
+ ++++|||..+........ ..++....|..++|+|||||.+.-..
T Consensus 172 g-i~liDfg~~~~~~e~~a~--------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 172 G-LRIIDLSGKRCTAQRKAK--------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred C-EEEEECCCcccccchhhH--------------HHHHHHhHhcccccccceeEeehHHH
Confidence 8 999999987654221100 11444556778999999999876543
No 431
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.83 E-value=1.2e-20 Score=218.70 Aligned_cols=278 Identities=23% Similarity=0.387 Sum_probs=164.4
Q ss_pred CCCEEECCCCCCCCcccccccCCCCCCEEeCcCCcCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEecc
Q 003296 31 GLEVLDFSSNNLNGNINLQFDELVSLKSLNLSKNKFNGFLPINLGKTKALEELVLSGNAFHGEIPKGIADYRNLTLIDLS 110 (833)
Q Consensus 31 ~L~~L~Ls~N~l~~~~~~~f~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 110 (833)
+...|+++++.++.++ ..+ .++|+.|+|++|+|+.+ |..+. ++|++|+|++|+|+. +|..+. .+|+.|+|+
T Consensus 179 ~~~~L~L~~~~LtsLP-~~I--p~~L~~L~Ls~N~LtsL-P~~l~--~nL~~L~Ls~N~Lts-LP~~l~--~~L~~L~Ls 249 (754)
T PRK15370 179 NKTELRLKILGLTTIP-ACI--PEQITTLILDNNELKSL-PENLQ--GNIKTLYANSNQLTS-IPATLP--DTIQEMELS 249 (754)
T ss_pred CceEEEeCCCCcCcCC-ccc--ccCCcEEEecCCCCCcC-Chhhc--cCCCEEECCCCcccc-CChhhh--ccccEEECc
Confidence 3455666666655432 222 13556666666666543 32222 356666666666552 343332 245566666
Q ss_pred CCcCCccCCccccCCCCCcEEECcCCcCCCCCCcccccCCccCccccccccccccCChhhhhcCCEEecccccccccCCc
Q 003296 111 ANNLSGSVPDRIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQNKFSGSVPGGITRFLRNLDLSYNKLLGVIPI 190 (833)
Q Consensus 111 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~~L~~L~Ls~N~l~~~~~~ 190 (833)
+|++. .+|..+. ++|+.|+|++|+|+. +|. .+...|+.|+|++|+++++ |.
T Consensus 250 ~N~L~-~LP~~l~--s~L~~L~Ls~N~L~~-LP~------------------------~l~~sL~~L~Ls~N~Lt~L-P~ 300 (754)
T PRK15370 250 INRIT-ELPERLP--SALQSLDLFHNKISC-LPE------------------------NLPEELRYLSVYDNSIRTL-PA 300 (754)
T ss_pred CCccC-cCChhHh--CCCCEEECcCCccCc-ccc------------------------ccCCCCcEEECCCCccccC-cc
Confidence 66655 3343332 355556665555552 333 3333466666666666542 33
Q ss_pred cCCCCCCCCEEecccccCcccCCCCCCcCCcEEEcCCccccCCCCccccCCCCCCCEEECCCCCCCCCCCccccCCCCCc
Q 003296 191 DLLSHPNLQTIDLSVNMLEGSLPQNMSPNLVRLRLGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLT 270 (833)
Q Consensus 191 ~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~n~l~~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 270 (833)
.+. ++|+.|++++|.++. +|..+.++|+.|++++|.+.+ +|.. + .++|+.|+|++|+|+. +|..+ .++|+
T Consensus 301 ~lp--~sL~~L~Ls~N~Lt~-LP~~l~~sL~~L~Ls~N~Lt~-LP~~-l--~~sL~~L~Ls~N~L~~-LP~~l--p~~L~ 370 (754)
T PRK15370 301 HLP--SGITHLNVQSNSLTA-LPETLPPGLKTLEAGENALTS-LPAS-L--PPELQVLDVSKNQITV-LPETL--PPTIT 370 (754)
T ss_pred cch--hhHHHHHhcCCcccc-CCccccccceeccccCCcccc-CChh-h--cCcccEEECCCCCCCc-CChhh--cCCcC
Confidence 222 356667777777663 454455677777777777654 4432 2 2689999999999984 56555 36899
Q ss_pred EEEccCCccCCCChhhhCCCCCCcEEEccCCcCCCcCch----hhcCCCcCceeeccCCcCcccCccccccCCCCCEEEc
Q 003296 271 LLNLAQNELNGSLPIQLGSLGILQVMNLQLNKLSGEIPS----QFSQLKLLSTMNISWNSLSGSIPSFLSNLTNLVNLNL 346 (833)
Q Consensus 271 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~----~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 346 (833)
.|+|++|+++. +|..+. ..|+.|++++|++.. +|. .+..++.+..|++.+|.++. ..+.+|+.| +
T Consensus 371 ~LdLs~N~Lt~-LP~~l~--~sL~~LdLs~N~L~~-LP~sl~~~~~~~~~l~~L~L~~Npls~------~tl~~L~~L-l 439 (754)
T PRK15370 371 TLDVSRNALTN-LPENLP--AALQIMQASRNNLVR-LPESLPHFRGEGPQPTRIIVEYNPFSE------RTIQNMQRL-M 439 (754)
T ss_pred EEECCCCcCCC-CCHhHH--HHHHHHhhccCCccc-CchhHHHHhhcCCCccEEEeeCCCccH------HHHHHHHHh-h
Confidence 99999999984 555554 368999999999984 444 34456888999999999873 334455555 4
Q ss_pred cCCccccc-cCccccCCCCCCE
Q 003296 347 RQNNLNGS-IPNSITNMRSLIE 367 (833)
Q Consensus 347 ~~N~l~~~-~p~~~~~l~~L~~ 367 (833)
+.+.+.|. ++...+....++.
T Consensus 440 ~s~~~~gp~i~~~~~~~~~l~~ 461 (754)
T PRK15370 440 SSVGYQGPRVLFAMGDFSIVRV 461 (754)
T ss_pred hcccccCCcccccccccccccc
Confidence 45555443 3333344444443
No 432
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.83 E-value=1.8e-20 Score=184.96 Aligned_cols=143 Identities=20% Similarity=0.152 Sum_probs=112.1
Q ss_pred ccccccCcccEEEEEEcCCCceEEEEEccccchhhhc-----------------c-----ChhHHHHHHHHHhcCCCCCc
Q 003296 560 LNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQL-----------------G-----SHHKFDKELEVLGKLSNSNV 617 (833)
Q Consensus 560 ~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~-----------------~-----~~~~~~~E~~~l~~l~H~ni 617 (833)
...||+|+||.||+|...+|+.||||+++........ . ....+.+|.+.+.+++|++|
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4579999999999999889999999998533110000 0 01234689999999999998
Q ss_pred ccceEEEecCCceEEEEeeCCCCChhhh-hhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCC-CCeeecCCCccceeeCC
Q 003296 618 MTPLAYVLASDSAYLFYEYAPKGTLFDV-LHGCLENALDWASRYSIAVGVAQGLAFLHGFTS-NPILLLDLSTRNIFLKS 695 (833)
Q Consensus 618 v~~~~~~~~~~~~~lv~ey~~~g~L~~~-l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~-~~iiHrdlk~~Nill~~ 695 (833)
.....+... ..++||||++++++... +. ...++..+...++.|++.++.|+| . .+|+||||||+||+++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~---~~~~~~~~~~~i~~~l~~~l~~lH---~~~givHrDlkP~NIll~- 152 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLK---DVPLEEEEAEELYEQVVEQMRRLY---QEAGLVHGDLSEYNILYH- 152 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhh---hccCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCChhhEEEE-
Confidence 665555443 24899999998865443 43 235778888999999999999999 6 7999999999999998
Q ss_pred CCCceeccceeeeeeC
Q 003296 696 LKEPQIGDIELCKVID 711 (833)
Q Consensus 696 ~~~~ki~dfgl~~~~~ 711 (833)
++.++++|||+++...
T Consensus 153 ~~~~~liDFG~a~~~~ 168 (190)
T cd05145 153 DGKPYIIDVSQAVELD 168 (190)
T ss_pred CCCEEEEEcccceecC
Confidence 7899999999998764
No 433
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.83 E-value=2e-20 Score=180.39 Aligned_cols=190 Identities=12% Similarity=0.058 Sum_probs=139.5
Q ss_pred CCccccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCC-CCCcccceEEEecCCceEEEEee
Q 003296 558 NPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLS-NSNVMTPLAYVLASDSAYLFYEY 636 (833)
Q Consensus 558 ~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~~~~lv~ey 636 (833)
.....+++|+||+||.+.. .+..++.+.+.....-........|.+|+++|++++ |++|++++++ +..+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 3457899999999997766 788888887742211111111236899999999995 5889999886 457999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCC-CccceeeCCCCCceeccceeeeeeCCCCC
Q 003296 637 APKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDL-STRNIFLKSLKEPQIGDIELCKVIDPSKS 715 (833)
Q Consensus 637 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdl-k~~Nill~~~~~~ki~dfgl~~~~~~~~~ 715 (833)
++|++|.+.+.. ....++.|+++++.|+| ..+|+|||| ||+|||++.++.++|+|||+|........
T Consensus 80 I~G~~L~~~~~~---------~~~~~~~qi~~~L~~lH---~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~ 147 (218)
T PRK12274 80 LAGAAMYQRPPR---------GDLAYFRAARRLLQQLH---RCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRAR 147 (218)
T ss_pred ecCccHHhhhhh---------hhHHHHHHHHHHHHHHH---HCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcch
Confidence 999999765421 11346789999999999 889999999 79999999999999999999986543221
Q ss_pred C----C--c-----cccccccccccccccccCC-ccc-ccCcchhhHHHHHHHHhCCCcccC
Q 003296 716 T----G--S-----LSTVAGSVGYIPPEYAYTM-RVT-MAGNVYSFGVILLELLTGKTAVNQ 764 (833)
Q Consensus 716 ~----~--~-----~~~~~gt~~y~aPE~~~~~-~~~-~~~Dv~S~Gvvl~elltg~~p~~~ 764 (833)
. . . ..-...++.|++|+...-. ..+ ...++++-|.-+|.++||+.++.+
T Consensus 148 ~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 148 WMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 0 0 0 0012367888888754321 223 567888999999999999998753
No 434
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.83 E-value=9e-22 Score=221.53 Aligned_cols=250 Identities=20% Similarity=0.271 Sum_probs=178.8
Q ss_pred hcCCccccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHH--HhcCCCCCcccceEEEecCCceEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEV--LGKLSNSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~--l~~l~H~niv~~~~~~~~~~~~~lv 633 (833)
.+...+.+|.+.|=+|.||+++.|. |+||++-+++.. -..+.|.++++- ..-.+|||.+++..+-..+...|||
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~---~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylv 99 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPT---ISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLV 99 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCC---CCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHH
Confidence 4566789999999999999998888 899998543322 233445443333 5556899999998888888889999
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeC-C
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVID-P 712 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~-~ 712 (833)
=+|..+ +|+|.+.. ..-+...+.+-||.|+..|+.-+| ..+|+|+|||.+|||++.-.-+-++||.--|... +
T Consensus 100 Rqyvkh-nLyDRlST--RPFL~~iEKkWiaFQLL~al~qcH---~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLP 173 (1431)
T KOG1240|consen 100 RQYVKH-NLYDRLST--RPFLVLIEKKWIAFQLLKALSQCH---KLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLP 173 (1431)
T ss_pred HHHHhh-hhhhhhcc--chHHHHHHHHHHHHHHHHHHHHHH---HcCccccccccceEEEeeechhhhhcccccCCccCC
Confidence 999976 99999975 334777888889999999999999 8899999999999999998889999997655432 1
Q ss_pred CCCCCccc----cccccccccccccccCC----------c-ccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhh
Q 003296 713 SKSTGSLS----TVAGSVGYIPPEYAYTM----------R-VTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNS 776 (833)
Q Consensus 713 ~~~~~~~~----~~~gt~~y~aPE~~~~~----------~-~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~ 776 (833)
.+.....+ +...-.+|.|||.+... . .+++.||||.|||+.|+++ |++||. +.+...-..
T Consensus 174 eDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~----LSQL~aYr~ 249 (1431)
T KOG1240|consen 174 EDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT----LSQLLAYRS 249 (1431)
T ss_pred CCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCccc----HHHHHhHhc
Confidence 11111111 11223479999987531 1 5788999999999999977 688885 222211111
Q ss_pred cccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 003296 777 AQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRML 829 (833)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L 829 (833)
......+..+. . -+...+++++..|++.||++|.++++.++.-
T Consensus 250 ~~~~~~e~~Le-~---------Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~y 292 (1431)
T KOG1240|consen 250 GNADDPEQLLE-K---------IEDVSLRNLILSMIQRDPSKRLSAEDYLQKY 292 (1431)
T ss_pred cCccCHHHHHH-h---------CcCccHHHHHHHHHccCchhccCHHHHHHhh
Confidence 10011111100 0 0112467899999999999999999998863
No 435
>PRK10345 hypothetical protein; Provisional
Probab=99.79 E-value=3.3e-19 Score=176.34 Aligned_cols=136 Identities=18% Similarity=0.172 Sum_probs=105.2
Q ss_pred CCccccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhcC-----CCCCcccceEEEecCC---c
Q 003296 558 NPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-----SNSNVMTPLAYVLASD---S 629 (833)
Q Consensus 558 ~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~H~niv~~~~~~~~~~---~ 629 (833)
+....||+|+||.||. .+.....+||++.... ....+.+.+|+++++++ +||||++++|++.++. .
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~----~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~ 78 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRG----DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGY 78 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCeEEEEEeccc----cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeE
Confidence 4567899999999996 5433334799884221 22356799999999999 6799999999999863 4
Q ss_pred -eEEEEee--CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHH-HhhhcCCCCCeeecCCCccceeeCC----CCCcee
Q 003296 630 -AYLFYEY--APKGTLFDVLHGCLENALDWASRYSIAVGVAQGL-AFLHGFTSNPILLLDLSTRNIFLKS----LKEPQI 701 (833)
Q Consensus 630 -~~lv~ey--~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l-~ylH~~~~~~iiHrdlk~~Nill~~----~~~~ki 701 (833)
+.+|+|| +++|+|.+++.+. .+++. ..++.+++.++ +||| +.+||||||||+|||++. +..++|
T Consensus 79 v~~~I~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh---~~~IvhrDlKp~NILl~~~~~~~~~~~L 150 (210)
T PRK10345 79 VYDVIADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLL---DNRIVTMELKPQNILCQRISESEVIPVV 150 (210)
T ss_pred EEEEEecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEeccCCCCCcEEE
Confidence 3479999 6689999999752 35555 35678888888 9999 889999999999999974 347999
Q ss_pred ccceee
Q 003296 702 GDIELC 707 (833)
Q Consensus 702 ~dfgl~ 707 (833)
+||+-+
T Consensus 151 iDg~G~ 156 (210)
T PRK10345 151 CDNIGE 156 (210)
T ss_pred EECCCC
Confidence 995433
No 436
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.79 E-value=3.5e-19 Score=181.51 Aligned_cols=232 Identities=19% Similarity=0.240 Sum_probs=149.4
Q ss_pred CccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCC----------CCcccceEEEec-
Q 003296 559 PLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSN----------SNVMTPLAYVLA- 626 (833)
Q Consensus 559 ~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H----------~niv~~~~~~~~- 626 (833)
..+.||.|+++.||.+++. +|+.+|||+..... .......+++.+|.-....+.+ -.++..++...-
T Consensus 16 ~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~-~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~ 94 (288)
T PF14531_consen 16 RGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPA-DASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIP 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEEEESS-TTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEET
T ss_pred EccccccCCceEEEEEEEccCCceEEEEEEeccc-ccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEc
Confidence 4578999999999999984 79999999985333 2333456778888766655433 122222332221
Q ss_pred --------CC--------ceEEEEeeCCCCChhhhhhc---CCC--CCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecC
Q 003296 627 --------SD--------SAYLFYEYAPKGTLFDVLHG---CLE--NALDWASRYSIAVGVAQGLAFLHGFTSNPILLLD 685 (833)
Q Consensus 627 --------~~--------~~~lv~ey~~~g~L~~~l~~---~~~--~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrd 685 (833)
.. ..+++|+-+ .+||.+++.. ... ..+....++.+..|+++.+++|| ..++||+|
T Consensus 95 ~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh---~~GlVHgd 170 (288)
T PF14531_consen 95 GKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLH---SYGLVHGD 170 (288)
T ss_dssp TS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEEEST
T ss_pred CCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHh---hcceEecc
Confidence 11 236778877 4599887642 111 23456667888899999999999 78899999
Q ss_pred CCccceeeCCCCCceeccceeeeeeCCCCCCCccccccccccccccccccC--------CcccccCcchhhHHHHHHHHh
Q 003296 686 LSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYT--------MRVTMAGNVYSFGVILLELLT 757 (833)
Q Consensus 686 lk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Dv~S~Gvvl~ellt 757 (833)
|||+|++++.+|.+.++||+-........ .....+..|.|||.... -.++.+.|.|++|+++|.|.+
T Consensus 171 i~~~nfll~~~G~v~Lg~F~~~~r~g~~~-----~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC 245 (288)
T PF14531_consen 171 IKPENFLLDQDGGVFLGDFSSLVRAGTRY-----RCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWC 245 (288)
T ss_dssp -SGGGEEE-TTS-EEE--GGGEEETTEEE-----EGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHH
T ss_pred cceeeEEEcCCCCEEEcChHHHeecCcee-----eccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHH
Confidence 99999999999999999998776543211 11344578999997643 257899999999999999999
Q ss_pred CCCcccCCccHHHHHHHhhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCC
Q 003296 758 GKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEAR 819 (833)
Q Consensus 758 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~R 819 (833)
|+.||+...... .. +..+.. +. +.+..+.+++..+|+.+|.+|
T Consensus 246 ~~lPf~~~~~~~------------~~---~~~f~~-C~---~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 246 GRLPFGLSSPEA------------DP---EWDFSR-CR---DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp SS-STCCCGGGS------------TS---GGGGTT-SS------HHHHHHHHHHT-SSGGGS
T ss_pred ccCCCCCCCccc------------cc---cccchh-cC---CcCHHHHHHHHHHccCCcccC
Confidence 999997432110 00 001111 11 455678899999999999988
No 437
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.79 E-value=1.4e-19 Score=171.18 Aligned_cols=200 Identities=15% Similarity=0.149 Sum_probs=161.4
Q ss_pred HHhcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCC-CCcccceEEEecCCceE
Q 003296 554 EAVANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSN-SNVMTPLAYVLASDSAY 631 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~~~~~~~~~~~~~ 631 (833)
...|...+.||.|+||.+|.|.. .+|..||||.=..+. .......|.++.+.++| ..|-.+..|..+...-.
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a------~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynv 87 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA------KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNV 87 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC------CCcchhHHHHHHHHhccCCCCchhhhhccccccce
Confidence 45678889999999999999994 789999999863221 23467789999999986 45666667777888899
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCC---CCceeccceeee
Q 003296 632 LFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSL---KEPQIGDIELCK 708 (833)
Q Consensus 632 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~---~~~ki~dfgl~~ 708 (833)
+|||.. |.+|.++..-+ .+.++..+.+-.|-|++.-++|+| ..+.|||||||+|.|..-. ..+.++|||+|+
T Consensus 88 lVMdLL-GPsLEdLfnfC-~R~ftmkTvLMLaDQml~RiEyvH---~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaK 162 (341)
T KOG1163|consen 88 LVMDLL-GPSLEDLFNFC-SRRFTMKTVLMLADQMLSRIEYVH---LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAK 162 (341)
T ss_pred eeeecc-CccHHHHHHHH-hhhhhHHhHHHHHHHHHHHHHHHH---hhccccccCCccceeeccccccceEEEEeccchh
Confidence 999988 88999988754 345888899999999999999999 7889999999999998643 456799999998
Q ss_pred eeCCCCCCC-----ccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccC
Q 003296 709 VIDPSKSTG-----SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQ 764 (833)
Q Consensus 709 ~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~ 764 (833)
...+..... ......||..|.+--...+..-+.+-|+=|+|-++...--|..||.+
T Consensus 163 ky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQg 223 (341)
T KOG1163|consen 163 KYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQG 223 (341)
T ss_pred hhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccc
Confidence 775432211 11346799999887766666677889999999999999999999975
No 438
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.75 E-value=5e-19 Score=187.28 Aligned_cols=176 Identities=23% Similarity=0.282 Sum_probs=132.2
Q ss_pred ceEEEEeeCCCCChhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceee
Q 003296 629 SAYLFYEYAPKGTLFDVLHGC-LENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELC 707 (833)
Q Consensus 629 ~~~lv~ey~~~g~L~~~l~~~-~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~ 707 (833)
..|+.|++|...+|.+|+.+. .....+|...+.++.|++.|+.| .+.+|||+||.||....+..+||+|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhhhe
Confidence 578999999999999999743 34468899999999999999999 46899999999999999999999999998
Q ss_pred eeeCCCC----CCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh-CCCcccCCccHHHHHHHhhcccccc
Q 003296 708 KVIDPSK----STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT-GKTAVNQGNELAKWVLRNSAQQDKL 782 (833)
Q Consensus 708 ~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 782 (833)
....... .....+.-+||..||+||.+.+..|+.|+||||+|++++|+++ -..+++.. ...
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~--------------~t~ 469 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERI--------------ATL 469 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHH--------------Hhh
Confidence 7665433 1223456789999999999999999999999999999999997 34443211 011
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 003296 783 DHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLR 827 (833)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~ 827 (833)
..+-|..+++. .. ...++-..++.+++.+.|.+||++.++..
T Consensus 470 ~d~r~g~ip~~--~~-~d~p~e~~ll~~lls~~p~~RP~~~~~~~ 511 (516)
T KOG1033|consen 470 TDIRDGIIPPE--FL-QDYPEEYTLLQQLLSPSPEERPSAIEVAL 511 (516)
T ss_pred hhhhcCCCChH--Hh-hcCcHHHHHHHHhcCCCcccCchHHHHhh
Confidence 11111112111 11 11223347888999999999996665543
No 439
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.74 E-value=6.5e-18 Score=167.39 Aligned_cols=198 Identities=12% Similarity=0.131 Sum_probs=161.6
Q ss_pred hcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCC-CCCcccceEEEecCCceEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLS-NSNVMTPLAYVLASDSAYLF 633 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~~~~lv 633 (833)
.|...+.||+|+||..+.|+. -+++.||||.=..+. ...+..-|.+..+.+. .+.|-..|-+..+.-+-.||
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS------~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLV 102 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS------EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILV 102 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccC------CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhh
Confidence 577889999999999999984 689999999763222 2234566777666664 58888887777777778899
Q ss_pred EeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCC-----Cceeccceeee
Q 003296 634 YEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLK-----EPQIGDIELCK 708 (833)
Q Consensus 634 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~-----~~ki~dfgl~~ 708 (833)
+|.+ |.||+|+..-+ ++.++..+..-||.|++.-++|+| ....|.|||||+|.||..-+ .+.+.|||+|+
T Consensus 103 idLL-GPSLEDLFD~C-gR~FSvKTV~miA~Qmi~rie~vH---~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK 177 (449)
T KOG1165|consen 103 IDLL-GPSLEDLFDLC-GRRFSVKTVAMIAKQMITRIEYVH---EKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAK 177 (449)
T ss_pred hhhh-CcCHHHHHHHh-cCcccHHhHHHHHHHHHHHHHHHH---hcceeecccCccceeecCCCCCCCceEEEEeccchh
Confidence 9988 78999988765 456899999999999999999999 78899999999999997443 46899999999
Q ss_pred eeCCCCCCC-----ccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccC
Q 003296 709 VIDPSKSTG-----SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQ 764 (833)
Q Consensus 709 ~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~ 764 (833)
...+..... ......||.+||+--...+..-+.+-|.=|+|-|++..+-|..||.+
T Consensus 178 ~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQG 238 (449)
T KOG1165|consen 178 EYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQG 238 (449)
T ss_pred hhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccc
Confidence 875443221 11346799999999888888889999999999999999999999974
No 440
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.74 E-value=6.5e-19 Score=198.89 Aligned_cols=211 Identities=18% Similarity=0.195 Sum_probs=148.1
Q ss_pred HHHHhcCCccccccCcccEEEEEEcC-CCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCce
Q 003296 552 AMEAVANPLNVELKTRFSTYYKAVMP-SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSA 630 (833)
Q Consensus 552 ~~~~~~~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~ 630 (833)
....+|+..+.|-.|+||.||...++ +.+.+|+ +++++.. +.|- ++.....|.+|
T Consensus 80 p~e~df~~IklisngAygavylvrh~~trqrfa~-kiNkq~l---------ilRn--ilt~a~npfvv------------ 135 (1205)
T KOG0606|consen 80 PSESDFNTIKLISNGAYGAVYLVRHKETRQRFAM-KINKQNL---------ILRN--ILTFAGNPFVV------------ 135 (1205)
T ss_pred CCccccceeEeeccCCCCceeeeeccccccchhh-cccccch---------hhhc--cccccCCccee------------
Confidence 34567888999999999999999875 6788888 4432211 1111 44444455554
Q ss_pred EEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeee
Q 003296 631 YLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVI 710 (833)
Q Consensus 631 ~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~ 710 (833)
||=.+.++.. +.++-. .+.+++|+| ..+|+|||+||+|.+|+.-|++|+.|||+.+..
T Consensus 136 ---------gDc~tllk~~--g~lPvd--------mvla~Eylh---~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~G 193 (1205)
T KOG0606|consen 136 ---------GDCATLLKNI--GPLPVD--------MVLAVEYLH---SYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKG 193 (1205)
T ss_pred ---------chhhhhcccC--CCCcch--------hhHHhHhhc---cCCeecCCCCCCcceeeecccccccchhhhhhh
Confidence 5666666642 233322 277899999 889999999999999999999999999998754
Q ss_pred CCCCCC-------------CccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhc
Q 003296 711 DPSKST-------------GSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSA 777 (833)
Q Consensus 711 ~~~~~~-------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 777 (833)
.....+ .....++||+.|.||||+....|...+|+|++|+|+||.+.|+.||.++.. .+.+.....
T Consensus 194 Lms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtp-eelfg~vis 272 (1205)
T KOG0606|consen 194 LMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP-EELFGQVIS 272 (1205)
T ss_pred hhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCH-HHHHhhhhh
Confidence 221110 112357999999999999999999999999999999999999999986532 222222222
Q ss_pred ccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCC
Q 003296 778 QQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARP 820 (833)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp 820 (833)
+.....+ .......++.+++.+.++.+|..|-
T Consensus 273 d~i~wpE-----------~dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 273 DDIEWPE-----------EDEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred hhccccc-----------cCcCCCHHHHHHHHHHHHhChHhhc
Confidence 1111111 0112345778999999999999994
No 441
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.74 E-value=4.4e-18 Score=172.15 Aligned_cols=197 Identities=16% Similarity=0.202 Sum_probs=136.1
Q ss_pred CCCCcccceEEEecC---------------------------CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHH
Q 003296 613 SNSNVMTPLAYVLAS---------------------------DSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVG 665 (833)
Q Consensus 613 ~H~niv~~~~~~~~~---------------------------~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ 665 (833)
+|||||++.++|.+. ...|+||.-.+. +|.+++.. ...+...+.-+..|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~---~~~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWT---RHRSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhc---CCCchHHHHHHHHH
Confidence 699999999888652 147999988766 99999975 23455556668899
Q ss_pred HHHHHHhhhcCCCCCeeecCCCccceeeC--CCC--CceeccceeeeeeCCCCC---CC-ccccccccccccccccccCC
Q 003296 666 VAQGLAFLHGFTSNPILLLDLSTRNIFLK--SLK--EPQIGDIELCKVIDPSKS---TG-SLSTVAGSVGYIPPEYAYTM 737 (833)
Q Consensus 666 i~~~l~ylH~~~~~~iiHrdlk~~Nill~--~~~--~~ki~dfgl~~~~~~~~~---~~-~~~~~~gt~~y~aPE~~~~~ 737 (833)
+.+|+.||| .++|.|||+|++|||+. +|. ...|+|||.|-.-+...- .. ..-...|...-||||+....
T Consensus 350 lLEav~hL~---~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~ 426 (598)
T KOG4158|consen 350 LLEAVTHLH---KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAV 426 (598)
T ss_pred HHHHHHHHH---HccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcC
Confidence 999999999 88999999999999984 444 357999998743221100 00 01124577789999987633
Q ss_pred c-----cc-ccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccccccccCCchhHHHHHHHHHHHHHhc
Q 003296 738 R-----VT-MAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVAC 811 (833)
Q Consensus 738 ~-----~~-~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c 811 (833)
+ .+ .|+|.|+.|.+.||+++...||....++.--... . ++..+.. -...++..+.+++...
T Consensus 427 PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~-Y-qe~qLPa-----------lp~~vpp~~rqlV~~l 493 (598)
T KOG4158|consen 427 PGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRT-Y-QESQLPA-----------LPSRVPPVARQLVFDL 493 (598)
T ss_pred CCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhh-h-hhhhCCC-----------CcccCChHHHHHHHHH
Confidence 2 22 6899999999999999999999863332110110 0 1011111 1123445677899999
Q ss_pred cCCCCCCCCCHHHHHHHH
Q 003296 812 VSVSPEARPKMKSVLRML 829 (833)
Q Consensus 812 l~~dP~~Rps~~evl~~L 829 (833)
++.||++||+..-....|
T Consensus 494 L~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 494 LKRDPSKRVSPNIAANVL 511 (598)
T ss_pred hcCCccccCCccHHHhHH
Confidence 999999999876554433
No 442
>smart00090 RIO RIO-like kinase.
Probab=99.74 E-value=7.2e-18 Score=171.30 Aligned_cols=146 Identities=14% Similarity=0.052 Sum_probs=109.2
Q ss_pred cCCccccccCcccEEEEEE--cCCCceEEEEEccccchhhhc--------------------cChhHHHHHHHHHhcCCC
Q 003296 557 ANPLNVELKTRFSTYYKAV--MPSGMSYFIKKLNWSDKIFQL--------------------GSHHKFDKELEVLGKLSN 614 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~--~~~~~~vavK~~~~~~~~~~~--------------------~~~~~~~~E~~~l~~l~H 614 (833)
|+..+.||+|+||.||+|. ..+|+.||||+++........ .....+.+|++++.++.|
T Consensus 30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~ 109 (237)
T smart00090 30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE 109 (237)
T ss_pred HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 5677899999999999998 568999999998532110000 011246789999999976
Q ss_pred CCcccceEEEecCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCC-eeecCCCccceee
Q 003296 615 SNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNP-ILLLDLSTRNIFL 693 (833)
Q Consensus 615 ~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~-iiHrdlk~~Nill 693 (833)
.. +.....+.. ...++||||+++++|...... .......+...++.|++.+++||| ..+ |+||||||+||++
T Consensus 110 ~~-i~~p~~~~~-~~~~lV~E~~~g~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH---~~g~iiH~Dikp~NIli 182 (237)
T smart00090 110 AG-VPVPKPIAW-RRNVLVMEFIGGDGLPAPRLK--DVEPEEEEEFELYDDILEEMRKLY---KEGELVHGDLSEYNILV 182 (237)
T ss_pred cC-CCCCeeeEe-cCceEEEEEecCCcccccccc--cCCcchHHHHHHHHHHHHHHHHHH---hcCCEEeCCCChhhEEE
Confidence 43 222222222 245899999999888776532 223555667789999999999999 778 9999999999999
Q ss_pred CCCCCceeccceeeeee
Q 003296 694 KSLKEPQIGDIELCKVI 710 (833)
Q Consensus 694 ~~~~~~ki~dfgl~~~~ 710 (833)
+ ++.++++|||.+...
T Consensus 183 ~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 183 H-DGKVVIIDVSQSVEL 198 (237)
T ss_pred E-CCCEEEEEChhhhcc
Confidence 9 889999999988754
No 443
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.74 E-value=9.5e-18 Score=169.32 Aligned_cols=138 Identities=17% Similarity=0.197 Sum_probs=115.5
Q ss_pred cccccCcccEEEEEEcCCCceEEEEEccccch----hhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEee
Q 003296 561 NVELKTRFSTYYKAVMPSGMSYFIKKLNWSDK----IFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEY 636 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey 636 (833)
+.||+|++|.||+|.. .|..|+||+...... .........+.+|++++.+++|++|.....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5789999999999987 778899998642211 01111235688999999999999999888888888889999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeee
Q 003296 637 APKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKV 709 (833)
Q Consensus 637 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~ 709 (833)
++|++|.+++... .+ ++..++.+++.+|.++| ..+++|||++|+||+++ ++.++++|||.++.
T Consensus 81 ~~G~~L~~~~~~~-----~~-~~~~i~~~i~~~l~~lH---~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSN-----GM-EELELSREIGRLVGKLH---SAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhc-----cH-HHHHHHHHHHHHHHHHH---hCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999998742 22 78899999999999999 78999999999999999 78899999998764
No 444
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.72 E-value=3e-19 Score=192.80 Aligned_cols=128 Identities=27% Similarity=0.287 Sum_probs=63.8
Q ss_pred EEECCCCCCCC--c-ccccCCCCCCEEECCCCCCCCc----ccccccCCCCCCEEeCcCCcCCC------CCCcccCCCC
Q 003296 12 LLNFSKNELVS--L-PTFNGFAGLEVLDFSSNNLNGN----INLQFDELVSLKSLNLSKNKFNG------FLPINLGKTK 78 (833)
Q Consensus 12 ~L~ls~N~l~~--i-~~f~~l~~L~~L~Ls~N~l~~~----~~~~f~~l~~L~~L~Ls~N~l~~------~~p~~~~~l~ 78 (833)
.|+|+.+.++. . ..|..+.+|+.|+++++.++.. ++..+...++|+.|++++|.+.+ .++..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 45666666653 2 2345566677777777776432 23334455666777777666652 1122344455
Q ss_pred CCCEEEccCCcCcccCCccccCCCC---CCEEeccCCcCCc----cCCccccCC-CCCcEEECcCCcCC
Q 003296 79 ALEELVLSGNAFHGEIPKGIADYRN---LTLIDLSANNLSG----SVPDRIGEL-SKLEVLILSANNLD 139 (833)
Q Consensus 79 ~L~~L~L~~N~l~~~~p~~~~~l~~---L~~L~Ls~N~l~~----~~~~~~~~l-~~L~~L~Ls~N~l~ 139 (833)
+|+.|+|++|.+....+..+..+.+ |+.|++++|+++. .+...+..+ ++|+.|+|++|.++
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~ 150 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLE 150 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCC
Confidence 5555555555554433333333333 5555555555441 112223333 44555555555444
No 445
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.72 E-value=1.9e-17 Score=165.44 Aligned_cols=134 Identities=21% Similarity=0.197 Sum_probs=109.7
Q ss_pred ccccCcccEEEEEEcCCCceEEEEEccccchh----hhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEeeC
Q 003296 562 VELKTRFSTYYKAVMPSGMSYFIKKLNWSDKI----FQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYA 637 (833)
Q Consensus 562 ~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey~ 637 (833)
.||+|+||.||+|.. +|..|+||+....... .......++.+|++++++++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 489999999999985 6788999986322110 01112356889999999999998877777777778889999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeee
Q 003296 638 PKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKV 709 (833)
Q Consensus 638 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~ 709 (833)
+|++|.+++.... . .++.+++++|.++| ..+++|||+||.||+++ ++.+++.|||.++.
T Consensus 80 ~g~~l~~~~~~~~--~-------~~~~~i~~~l~~lH---~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGN--D-------ELLREIGRLVGKLH---KAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcH--H-------HHHHHHHHHHHHHH---HCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 9999999876421 1 78999999999999 88999999999999999 78999999998865
No 446
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.72 E-value=4e-19 Score=191.80 Aligned_cols=106 Identities=26% Similarity=0.282 Sum_probs=55.6
Q ss_pred EEECCCCCCC-CcccccccCCCCCCEEeCcCCcCCCC----CCcccCCCCCCCEEEccCCcCcc------cCCccccCCC
Q 003296 34 VLDFSSNNLN-GNINLQFDELVSLKSLNLSKNKFNGF----LPINLGKTKALEELVLSGNAFHG------EIPKGIADYR 102 (833)
Q Consensus 34 ~L~Ls~N~l~-~~~~~~f~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~------~~p~~~~~l~ 102 (833)
.|+|..+.++ .-....|..+.+|+.|+++++.++.. ++..+...++|++|++++|.+.+ .++..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 4667777776 23334456666777777777776432 23344455566666666665542 1223344445
Q ss_pred CCCEEeccCCcCCccCCccccCCCC---CcEEECcCCcCC
Q 003296 103 NLTLIDLSANNLSGSVPDRIGELSK---LEVLILSANNLD 139 (833)
Q Consensus 103 ~L~~L~Ls~N~l~~~~~~~~~~l~~---L~~L~Ls~N~l~ 139 (833)
+|+.|++++|.+.+..+..|..+.+ |++|++++|+++
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~ 121 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLG 121 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccc
Confidence 5555555555554333333333333 555555554443
No 447
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.71 E-value=2.5e-17 Score=189.07 Aligned_cols=140 Identities=21% Similarity=0.138 Sum_probs=112.6
Q ss_pred hcCCccccccCcccEEEEEEcCCCceEEEEEccccc-h---hhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceE
Q 003296 556 VANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSD-K---IFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAY 631 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~-~---~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~ 631 (833)
.|...+.||+|+||+||+|...... +++|+...+. + .......+++.+|++++++++|++++....++..++..+
T Consensus 334 ~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~ 412 (535)
T PRK09605 334 RKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKT 412 (535)
T ss_pred ccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCE
Confidence 3456789999999999999875443 4444321111 1 011112357899999999999999999888888888899
Q ss_pred EEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeee
Q 003296 632 LFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVI 710 (833)
Q Consensus 632 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~ 710 (833)
+||||+++++|.+++. .+..++.+++++|.||| ..+|+|||+||+|||+ +++.++++|||+++..
T Consensus 413 lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH---~~giiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 413 IVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLH---KAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred EEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHH---hCCCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 9999999999998875 35678999999999999 7899999999999999 5788999999999764
No 448
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.71 E-value=2.8e-17 Score=163.77 Aligned_cols=140 Identities=20% Similarity=0.114 Sum_probs=108.7
Q ss_pred cCCccccccCcccEEEEEEcCCCceEEEEEccccchhhh------------------ccChhHHHHHHHHHhcCCCCC--
Q 003296 557 ANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQ------------------LGSHHKFDKELEVLGKLSNSN-- 616 (833)
Q Consensus 557 ~~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~------------------~~~~~~~~~E~~~l~~l~H~n-- 616 (833)
|...+.||+|+||.||+|..++|+.||||++........ ......+.+|+.++.++.|++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 96 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP 96 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 566789999999999999998999999998742210000 001224778999999998874
Q ss_pred cccceEEEecCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCC
Q 003296 617 VMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSL 696 (833)
Q Consensus 617 iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~ 696 (833)
+.+.++ ....++||||+++++|.+.... .....++.++++++.++| ..+|+||||||+||+++++
T Consensus 97 v~~~~~----~~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh---~~gi~H~Dl~p~Nill~~~ 161 (198)
T cd05144 97 VPKPID----WNRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAY---KHGIIHGDLSEFNILVDDD 161 (198)
T ss_pred CCceee----cCCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHH---HCCCCcCCCCcccEEEcCC
Confidence 444433 3456999999999999775431 234568899999999999 7899999999999999999
Q ss_pred CCceeccceeeeeeC
Q 003296 697 KEPQIGDIELCKVID 711 (833)
Q Consensus 697 ~~~ki~dfgl~~~~~ 711 (833)
+.++++|||.+....
T Consensus 162 ~~~~liDfg~~~~~~ 176 (198)
T cd05144 162 EKIYIIDWPQMVSTD 176 (198)
T ss_pred CcEEEEECCccccCC
Confidence 999999999986554
No 449
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.71 E-value=2.7e-17 Score=190.37 Aligned_cols=196 Identities=16% Similarity=0.115 Sum_probs=160.2
Q ss_pred HHHhcCCccccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCC---CCCcccceEEEecCCc
Q 003296 553 MEAVANPLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLS---NSNVMTPLAYVLASDS 629 (833)
Q Consensus 553 ~~~~~~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~~~~~~~~~~~ 629 (833)
-...|.+...+|+|+||.||+|...+|+.||+|+=+... .=+|.-=.+++.||+ -+-|..+..++...+.
T Consensus 696 ~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~-------~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~ 768 (974)
T KOG1166|consen 696 GGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPN-------PWEFYICLQVMERLKPQMLPSIMHISSAHVFQNA 768 (974)
T ss_pred cceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCC-------ceeeeehHHHHHhhchhhhcchHHHHHHHccCCc
Confidence 345677889999999999999998889999999874221 112433445566665 2456677777778899
Q ss_pred eEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCC-------CCCceec
Q 003296 630 AYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKS-------LKEPQIG 702 (833)
Q Consensus 630 ~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~-------~~~~ki~ 702 (833)
-++|+||.+.|+|.+++.. ...++|...+.++.|+++-+++|| ..+|||+||||+|.||.. ...++|+
T Consensus 769 S~lv~ey~~~Gtlld~~N~--~~~m~e~lv~~~~~qml~ive~lH---~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lI 843 (974)
T KOG1166|consen 769 SVLVSEYSPYGTLLDLINT--NKVMDEYLVMFFSCQMLRIVEHLH---AMGIIHGDIKPDNFLLRREICADSDSKGLYLI 843 (974)
T ss_pred ceeeeeccccccHHHhhcc--CCCCCchhhhHHHHHHHHHHHHHH---hcceecccCCcceeEeecccCCCCcccceEEE
Confidence 9999999999999999984 567999999999999999999999 889999999999999942 2457999
Q ss_pred cceeeeeeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCC
Q 003296 703 DIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKT 760 (833)
Q Consensus 703 dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~ 760 (833)
|||-+--+.--.........++|-++-.+|+..+..++..+|-|.+.-+++-|+.|+.
T Consensus 844 DfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 844 DFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred ecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 9998865542222234467889999999999999999999999999999999999975
No 450
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.70 E-value=3.6e-19 Score=159.75 Aligned_cols=157 Identities=29% Similarity=0.446 Sum_probs=85.1
Q ss_pred ccccCCCCCCEEECCCCCCCCcccccccCCCCCCEEeCcCCcCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCC
Q 003296 24 PTFNGFAGLEVLDFSSNNLNGNINLQFDELVSLKSLNLSKNKFNGFLPINLGKTKALEELVLSGNAFHGEIPKGIADYRN 103 (833)
Q Consensus 24 ~~f~~l~~L~~L~Ls~N~l~~~~~~~f~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 103 (833)
|.+..+++++.|.||+|+++.+. ..++.+.+|+.|++++|+|+ ..|..++.++.|+.|+++-|++. +.|..|+.++.
T Consensus 27 ~gLf~~s~ITrLtLSHNKl~~vp-pnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~ 103 (264)
T KOG0617|consen 27 PGLFNMSNITRLTLSHNKLTVVP-PNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPA 103 (264)
T ss_pred ccccchhhhhhhhcccCceeecC-CcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCch
Confidence 33344455555555555555332 24555555555555555555 24555555555555555555554 55555555555
Q ss_pred CCEEeccCCcCCc-cCCccccCCCCCcEEECcCCcCCCCCCcccccCCccCccccccccccccCChhh--hhcCCEEecc
Q 003296 104 LTLIDLSANNLSG-SVPDRIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQNKFSGSVPGGI--TRFLRNLDLS 180 (833)
Q Consensus 104 L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~--~~~L~~L~Ls 180 (833)
|+.|||++|++.. .+|+.|-.|+.|+-|+|++|.+. .+|..++.+++|+.|.+..|.+. .+|..+ +..|+.|.+.
T Consensus 104 levldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiq 181 (264)
T KOG0617|consen 104 LEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQ 181 (264)
T ss_pred hhhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcc
Confidence 5555555555542 44555555555555555555554 45555555555555555555554 344433 3345555666
Q ss_pred ccccc
Q 003296 181 YNKLL 185 (833)
Q Consensus 181 ~N~l~ 185 (833)
+|+++
T Consensus 182 gnrl~ 186 (264)
T KOG0617|consen 182 GNRLT 186 (264)
T ss_pred cceee
Confidence 66655
No 451
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.66 E-value=2.1e-18 Score=154.89 Aligned_cols=154 Identities=28% Similarity=0.492 Sum_probs=97.8
Q ss_pred CCCCCCEEECCCCCCCCc-ccccCCCCCCEEECCCCCCCCcccccccCCCCCCEEeCcCCcCCCCCCcccCCCCCCCEEE
Q 003296 6 GIDGLKLLNFSKNELVSL-PTFNGFAGLEVLDFSSNNLNGNINLQFDELVSLKSLNLSKNKFNGFLPINLGKTKALEELV 84 (833)
Q Consensus 6 ~l~~L~~L~ls~N~l~~i-~~f~~l~~L~~L~Ls~N~l~~~~~~~f~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 84 (833)
++++++.|.||+|+++.+ |.+..+.+|++|++++|+|+. .|.++++++.|+.|+++-|++. +.|..|+.++.|+.||
T Consensus 31 ~~s~ITrLtLSHNKl~~vppnia~l~nlevln~~nnqie~-lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levld 108 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLTVVPPNIAELKNLEVLNLSNNQIEE-LPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLD 108 (264)
T ss_pred chhhhhhhhcccCceeecCCcHHHhhhhhhhhcccchhhh-cChhhhhchhhhheecchhhhh-cCccccCCCchhhhhh
Confidence 445556666666666665 345666666666666666653 3445666666666666666665 4566666666666666
Q ss_pred ccCCcCcc-cCCccccCCCCCCEEeccCCcCCccCCccccCCCCCcEEECcCCcCCCCCCcccccCCccCcccccccccc
Q 003296 85 LSGNAFHG-EIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQNKFS 163 (833)
Q Consensus 85 L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~ 163 (833)
|.+|++.. .+|..|..++-|+-|+|+.|.+. ++|.+++++++|+.|.+..|.+- .+|..++.++.|+.|.+.+|+++
T Consensus 109 ltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~ 186 (264)
T KOG0617|consen 109 LTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLT 186 (264)
T ss_pred ccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceee
Confidence 66666643 45666666666666666666665 55666666666666666666665 45666666666666666666665
No 452
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.64 E-value=3.3e-17 Score=186.68 Aligned_cols=257 Identities=20% Similarity=0.173 Sum_probs=188.0
Q ss_pred hcCCccccccCcccEEEEEEcC--CCceEEEEEccccchhhhccChhHHHHHHHHHhcCC-CCCcccceEEEecCCceEE
Q 003296 556 VANPLNVELKTRFSTYYKAVMP--SGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLS-NSNVMTPLAYVLASDSAYL 632 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~~~~l 632 (833)
.|...+-||+|+|+.|-..... ....+|+|.+.... ...........|..+-..+. |+|++++++.....+..++
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~--~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP--KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCC--CccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 3555667999999999888764 45567777774332 11122334455888777777 9999999999999999999
Q ss_pred EEeeCCCCChhhhh-hcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCC-Cceeccceeeeee
Q 003296 633 FYEYAPKGTLFDVL-HGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLK-EPQIGDIELCKVI 710 (833)
Q Consensus 633 v~ey~~~g~L~~~l-~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~-~~ki~dfgl~~~~ 710 (833)
++||.++|++++.+ +... ...+......+..|+..|+.|+|. ..++.|||+||+|.+++..+ ..|++|||+|...
T Consensus 99 ~~~~s~g~~~f~~i~~~~~-~~~~~~~~~~~~~ql~s~l~~~H~--~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~ 175 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDS-TGTSSSSASRYLPQLNSGLSYLHP--ENGVTHRDIKPSNSLLDESGSALKIADFGLATAY 175 (601)
T ss_pred ccCcccccccccccccCCc-cCCCCcchhhhhhhhccCccccCc--ccccccCCCCCccchhccCCCcccCCCchhhccc
Confidence 99999999999998 5421 134555666789999999999995 45799999999999999999 9999999999877
Q ss_pred CC-CCCCCccccccc-cccccccccccCCcc-cccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccccccccccc
Q 003296 711 DP-SKSTGSLSTVAG-SVGYIPPEYAYTMRV-TMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHILD 787 (833)
Q Consensus 711 ~~-~~~~~~~~~~~g-t~~y~aPE~~~~~~~-~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (833)
.. ..........+| ++.|+|||...+..| ....|+||.|+++.-+++|..|+....... ........
T Consensus 176 ~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~----------~~~~~~~~ 245 (601)
T KOG0590|consen 176 RNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD----------GRYSSWKS 245 (601)
T ss_pred cccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc----------ccceeecc
Confidence 65 333333455788 999999999887544 578999999999999999999987332211 01111111
Q ss_pred ccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 003296 788 FNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLR 827 (833)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~ 827 (833)
.........+........++..+++..+|..|.+.+++..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 246 NKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred cccccccCccccCChhhhhcccccccCCchhccccccccc
Confidence 1101011112234456678888999999999999888643
No 453
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.64 E-value=6.3e-16 Score=147.02 Aligned_cols=135 Identities=23% Similarity=0.139 Sum_probs=114.1
Q ss_pred ccccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCC--CCcccceEEEecCCceEEEEeeC
Q 003296 560 LNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSN--SNVMTPLAYVLASDSAYLFYEYA 637 (833)
Q Consensus 560 ~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~~~~~~~~~~~~~lv~ey~ 637 (833)
.+.+|+|.++.||++...+ ..++||....... ...+.+|+.++++++| +++.++++++..++..+++|||+
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~------~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~ 75 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK------GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWI 75 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCCCc------hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEec
Confidence 4679999999999999854 7899999842211 4579999999999987 58999999888888999999999
Q ss_pred CCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeee
Q 003296 638 PKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVI 710 (833)
Q Consensus 638 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~ 710 (833)
+++.+..+ ++.....++.+++++++++|.....+++|+|+||+||++++.+.+++.|||.++..
T Consensus 76 ~g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 76 EGETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred CCeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence 98877643 56677788999999999999654468999999999999999899999999988753
No 454
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.62 E-value=1.4e-15 Score=150.29 Aligned_cols=140 Identities=18% Similarity=0.108 Sum_probs=98.8
Q ss_pred ccccccCcccEEEEEEcCCCceEEEEEccccchhhhccC--------------------hhHHHHHHHHHhcCCCCC--c
Q 003296 560 LNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGS--------------------HHKFDKELEVLGKLSNSN--V 617 (833)
Q Consensus 560 ~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~--------------------~~~~~~E~~~l~~l~H~n--i 617 (833)
.+.||+|+||.||+|...+|+.||||++........... ......|.+.+.++++.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 367999999999999988899999998843211110000 001145677777775543 3
Q ss_pred ccceEEEecCCceEEEEeeCCCCChhh-hhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCC-CCeeecCCCccceeeCC
Q 003296 618 MTPLAYVLASDSAYLFYEYAPKGTLFD-VLHGCLENALDWASRYSIAVGVAQGLAFLHGFTS-NPILLLDLSTRNIFLKS 695 (833)
Q Consensus 618 v~~~~~~~~~~~~~lv~ey~~~g~L~~-~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~-~~iiHrdlk~~Nill~~ 695 (833)
.+.+++ ...++||||+++|++.. .+... ... .+...++.+++.++.++| . .+|+|||+||+||+++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~---~~~-~~~~~~~~~~~~~l~~lh---~~~~ivH~Dl~p~Nili~- 149 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDV---RLL-EDPEELYDQILELMRKLY---REAGLVHGDLSEYNILVD- 149 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhh---hhc-ccHHHHHHHHHHHHHHHh---hccCcCcCCCChhhEEEE-
Confidence 333332 34699999999965432 12211 011 556788999999999999 6 8899999999999999
Q ss_pred CCCceeccceeeeeeC
Q 003296 696 LKEPQIGDIELCKVID 711 (833)
Q Consensus 696 ~~~~ki~dfgl~~~~~ 711 (833)
++.++++|||.+....
T Consensus 150 ~~~~~liDfg~a~~~~ 165 (187)
T cd05119 150 DGKVYIIDVPQAVEID 165 (187)
T ss_pred CCcEEEEECccccccc
Confidence 8999999999987553
No 455
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.58 E-value=6.5e-15 Score=150.05 Aligned_cols=140 Identities=16% Similarity=0.159 Sum_probs=107.7
Q ss_pred ccccc-cCcccEEEEEEcCCCceEEEEEccccch---hh------hccChhHHHHHHHHHhcCCCCCc--ccceEEEecC
Q 003296 560 LNVEL-KTRFSTYYKAVMPSGMSYFIKKLNWSDK---IF------QLGSHHKFDKELEVLGKLSNSNV--MTPLAYVLAS 627 (833)
Q Consensus 560 ~~~ig-~g~~g~vy~~~~~~~~~vavK~~~~~~~---~~------~~~~~~~~~~E~~~l~~l~H~ni--v~~~~~~~~~ 627 (833)
..++| .|+.|+||++... |..+|||+...... .. .......+.+|++++.+++|++| ++.+++...+
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 46788 8999999999884 77899998843211 00 11234578999999999998885 6677775543
Q ss_pred Cc----eEEEEeeCCC-CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceec
Q 003296 628 DS----AYLFYEYAPK-GTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIG 702 (833)
Q Consensus 628 ~~----~~lv~ey~~~-g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~ 702 (833)
.. .++||||+++ ++|.+++.. ..++.. .+.+++.++.++| ..+|+||||||+|||++.++.++++
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~---~~l~~~----~~~~i~~~l~~lH---~~GI~HrDlkp~NILv~~~~~v~LI 184 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQE---APLSEE----QWQAIGQLIARFH---DAGVYHADLNAHNILLDPDGKFWLI 184 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhc---CCCCHH----HHHHHHHHHHHHH---HCCCCCCCCCchhEEEcCCCCEEEE
Confidence 22 3599999997 699998864 234443 3578999999999 8899999999999999988899999
Q ss_pred cceeeeee
Q 003296 703 DIELCKVI 710 (833)
Q Consensus 703 dfgl~~~~ 710 (833)
|||.+...
T Consensus 185 Dfg~~~~~ 192 (239)
T PRK01723 185 DFDRGELR 192 (239)
T ss_pred ECCCcccC
Confidence 99988653
No 456
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.52 E-value=2.4e-15 Score=149.18 Aligned_cols=204 Identities=19% Similarity=0.258 Sum_probs=140.8
Q ss_pred HHHhcCCCCCcccceEEEecC-----CceEEEEeeCCCCChhhhhhcCCC--CCCCHHHHHHHHHHHHHHHHhhhcCCCC
Q 003296 607 EVLGKLSNSNVMTPLAYVLAS-----DSAYLFYEYAPKGTLFDVLHGCLE--NALDWASRYSIAVGVAQGLAFLHGFTSN 679 (833)
Q Consensus 607 ~~l~~l~H~niv~~~~~~~~~-----~~~~lv~ey~~~g~L~~~l~~~~~--~~l~~~~~~~i~~~i~~~l~ylH~~~~~ 679 (833)
.-+-++-|.|||+++.|+.+. .+..++.|||+.|++.++|++... ..+....-.+|+.||..||.|||+. .+
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~P 197 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DP 197 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CC
Confidence 345556799999999998753 457899999999999999986433 2466666678999999999999975 78
Q ss_pred CeeecCCCccceeeCCCCCceeccceeeeeeCCCC--CCCccccccccccccccccccCCcccccCcchhhHHHHHHHHh
Q 003296 680 PILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSK--STGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLT 757 (833)
Q Consensus 680 ~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~ellt 757 (833)
+|+|+++...-|.+..++-+|++---......... .+.......|-++|.|||+-.....+.++|||+||...+||..
T Consensus 198 piihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemai 277 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAI 277 (458)
T ss_pred ccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHH
Confidence 99999999999999999888875321111000000 0011123457889999999887788899999999999999998
Q ss_pred CCCccc-CCccHHHHHHHhhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 003296 758 GKTAVN-QGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRML 829 (833)
Q Consensus 758 g~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L 829 (833)
|..--. ........ ..+...+ +. ... ..=++.+.+|++..|..||+|++.+.|.
T Consensus 278 lEiq~tnseS~~~~e--------e~ia~~i---~~-len------~lqr~~i~kcl~~eP~~rp~ar~llfHp 332 (458)
T KOG1266|consen 278 LEIQSTNSESKVEVE--------ENIANVI---IG-LEN------GLQRGSITKCLEGEPNGRPDARLLLFHP 332 (458)
T ss_pred heeccCCCcceeehh--------hhhhhhe---ee-ccC------ccccCcCcccccCCCCCCcchhhhhcCc
Confidence 865322 11111000 0000000 00 000 0113567799999999999999988764
No 457
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.48 E-value=1.4e-13 Score=152.51 Aligned_cols=146 Identities=16% Similarity=0.094 Sum_probs=103.9
Q ss_pred ccccccCcccEEEEEEcCCCceEEEEEccccchhhhc------------------------------------cChhHHH
Q 003296 560 LNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQL------------------------------------GSHHKFD 603 (833)
Q Consensus 560 ~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~------------------------------------~~~~~~~ 603 (833)
.+.+|.|++|.||+|++.+|+.||||+.+..-...-. ..+-+|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 3679999999999999999999999998532100000 0011477
Q ss_pred HHHHHHhcCC-----CCCcccceEEEecCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHH-HHHhhhcCC
Q 003296 604 KELEVLGKLS-----NSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQ-GLAFLHGFT 677 (833)
Q Consensus 604 ~E~~~l~~l~-----H~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~-~l~ylH~~~ 677 (833)
+|++.+.+++ +++|.-..-|.......+|||||++|++|.++...... .. .+..++..++. .+..+|
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~-~~---~~~~ia~~~~~~~l~ql~--- 274 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA-GL---DRKALAENLARSFLNQVL--- 274 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc-CC---CHHHHHHHHHHHHHHHHH---
Confidence 7887777763 34443333333334567999999999999987653211 12 23456666665 467788
Q ss_pred CCCeeecCCCccceeeCCCCCceeccceeeeeeCC
Q 003296 678 SNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDP 712 (833)
Q Consensus 678 ~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~ 712 (833)
..+++|+|+||.||+++.++.+++.|||++..+.+
T Consensus 275 ~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 275 RDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred hCCceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 77899999999999999999999999999987753
No 458
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.39 E-value=7e-15 Score=155.87 Aligned_cols=195 Identities=30% Similarity=0.436 Sum_probs=138.9
Q ss_pred EEECCCCCCCCcc--cc-cCCCCCCEEECCCCCCCCcccccccCCCCCCEEeCcCCcCCCCCCcccCCCCCCCEEEccCC
Q 003296 12 LLNFSKNELVSLP--TF-NGFAGLEVLDFSSNNLNGNINLQFDELVSLKSLNLSKNKFNGFLPINLGKTKALEELVLSGN 88 (833)
Q Consensus 12 ~L~ls~N~l~~i~--~f-~~l~~L~~L~Ls~N~l~~~~~~~f~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 88 (833)
.|.|++.++...| ++ -++..-...||+.|++. ..|..+..+..|..|.|.+|.|. .+|..+.++..|.+|||+.|
T Consensus 54 ~l~Ls~rrlk~fpr~a~~~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~N 131 (722)
T KOG0532|consen 54 RLLLSGRRLKEFPRGAASYDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSN 131 (722)
T ss_pred ccccccchhhcCCCccccccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccc
Confidence 3556666666653 22 23555566777777776 34556666677777777777776 46677777777777777777
Q ss_pred cCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCcEEECcCCcCCCCCCcccccCCccCccccccccccccCCh
Q 003296 89 AFHGEIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQNKFSGSVPG 168 (833)
Q Consensus 89 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~ 168 (833)
+++ .+|..+..|+ |+.|-+++|+++ .+|..++.+..|..||.+.|.+. .+|..++.+.+|+.|.+..|++.. +|.
T Consensus 132 qlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~~-lp~ 206 (722)
T KOG0532|consen 132 QLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLED-LPE 206 (722)
T ss_pred hhh-cCChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhhh-CCH
Confidence 776 5666666665 777777777776 56666777777777777777776 466677777777777777777763 444
Q ss_pred hhh-hcCCEEecccccccccCCccCCCCCCCCEEecccccCcccCCCC
Q 003296 169 GIT-RFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQN 215 (833)
Q Consensus 169 ~~~-~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~ 215 (833)
.+. --|..||+|.|++. .+|..|..|.+|++|.|.+|.++. .|..
T Consensus 207 El~~LpLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLqS-PPAq 252 (722)
T KOG0532|consen 207 ELCSLPLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQS-PPAQ 252 (722)
T ss_pred HHhCCceeeeecccCcee-ecchhhhhhhhheeeeeccCCCCC-ChHH
Confidence 443 22889999999998 679999999999999999999983 4443
No 459
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.37 E-value=1.1e-12 Score=142.39 Aligned_cols=252 Identities=17% Similarity=0.120 Sum_probs=180.5
Q ss_pred HHhcCCcccccc--CcccEEEEEEc---CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCC-CCCcccceEEEecC
Q 003296 554 EAVANPLNVELK--TRFSTYYKAVM---PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLS-NSNVMTPLAYVLAS 627 (833)
Q Consensus 554 ~~~~~~~~~ig~--g~~g~vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~ 627 (833)
...|....-+|. |.+|.||++.. .++..+|+|+-+... ........=.+|+....+++ |+|.|+.+..+.+.
T Consensus 113 ~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~--s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~ 190 (524)
T KOG0601|consen 113 DQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPF--SPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGS 190 (524)
T ss_pred hhhcccccccccCCCCCceeecccCCcccCCcccccccccCCC--CCccccccccchhhcccccCccccccccCcccccC
Confidence 345667788999 99999999987 378999999853211 11122233456777777775 99999999999999
Q ss_pred CceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHH----HHHhhhcCCCCCeeecCCCccceeeCCC-CCceec
Q 003296 628 DSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQ----GLAFLHGFTSNPILLLDLSTRNIFLKSL-KEPQIG 702 (833)
Q Consensus 628 ~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~----~l~ylH~~~~~~iiHrdlk~~Nill~~~-~~~ki~ 702 (833)
+..++-+|+|. .+|.++.+.. ...++....+.+..+..+ |+.++| ...++|-|+||+||.+..+ ...+.+
T Consensus 191 ~~lfiqtE~~~-~sl~~~~~~~-~~~~p~~~l~~~~~~~~~~~~~al~~~h---s~~~~~~~~kp~~i~~~~~~~s~~~~ 265 (524)
T KOG0601|consen 191 GILFIQTELCG-ESLQSYCHTP-CNFLPDNLLWNSLRDWLSRDVTALSHLH---SNNIVHDDLKPANIFTTSDWTSCKLT 265 (524)
T ss_pred Ccceeeecccc-chhHHhhhcc-cccCCchhhhhHHhhhhhcccccccccC---CCcccccccchhheecccccceeecC
Confidence 99999999995 6888888753 223566666677777777 999999 8899999999999999998 889999
Q ss_pred cceeeeeeCCCCCCCc---cccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhccc
Q 003296 703 DIELCKVIDPSKSTGS---LSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQ 779 (833)
Q Consensus 703 dfgl~~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 779 (833)
|||+...+........ ....-|...|++||... ..++.+.|+||+|.+..|..++..+...+.. ..|..
T Consensus 266 df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~-~~W~~------ 337 (524)
T KOG0601|consen 266 DFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKN-SSWSQ------ 337 (524)
T ss_pred CcceeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCC-CCccc------
Confidence 9999988765432111 11125677899999765 4688999999999999999999877653311 11211
Q ss_pred ccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 003296 780 DKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLR 827 (833)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~ 827 (833)
.+....+ .+.......++...+..+++.+|..|++.+++..
T Consensus 338 --~r~~~ip-----~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 338 --LRQGYIP-----LEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred --cccccCc-----hhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 1111100 0111112234445788999999999999988754
No 460
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.32 E-value=4.4e-12 Score=141.85 Aligned_cols=148 Identities=12% Similarity=0.010 Sum_probs=95.6
Q ss_pred HHhcCCccccccCcccEEEEEEcCC-CceEEEEEccccchhh-------------------hc-----------c-----
Q 003296 554 EAVANPLNVELKTRFSTYYKAVMPS-GMSYFIKKLNWSDKIF-------------------QL-----------G----- 597 (833)
Q Consensus 554 ~~~~~~~~~ig~g~~g~vy~~~~~~-~~~vavK~~~~~~~~~-------------------~~-----------~----- 597 (833)
-+.|+. +.+|+|++|.||+|++++ |+.||||++.+.-... .. .
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 345666 789999999999999976 9999999995321100 00 0
Q ss_pred -ChhHHHHHHHHHhcCC----CCCcccceEEEec-CCceEEEEeeCCCCChhhh--hhcCCCC--CCCHHHHHHHHHHHH
Q 003296 598 -SHHKFDKELEVLGKLS----NSNVMTPLAYVLA-SDSAYLFYEYAPKGTLFDV--LHGCLEN--ALDWASRYSIAVGVA 667 (833)
Q Consensus 598 -~~~~~~~E~~~l~~l~----H~niv~~~~~~~~-~~~~~lv~ey~~~g~L~~~--l~~~~~~--~l~~~~~~~i~~~i~ 667 (833)
.+-+|.+|++.+.+++ +.+.|.+-.+|.+ ....+|||||++|+++.++ +...... .+.......++.|+
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi- 276 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV- 276 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-
Confidence 0123555665555553 3333443333333 4567899999999999874 2221100 12222222223333
Q ss_pred HHHHhhhcCCCCCeeecCCCccceeeCCCC----CceeccceeeeeeCC
Q 003296 668 QGLAFLHGFTSNPILLLDLSTRNIFLKSLK----EPQIGDIELCKVIDP 712 (833)
Q Consensus 668 ~~l~ylH~~~~~~iiHrdlk~~Nill~~~~----~~ki~dfgl~~~~~~ 712 (833)
+ ..+++|+|+||.||+++.++ .+++.|||++..++.
T Consensus 277 ------f---~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 277 ------F---RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred ------H---hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 2 46899999999999999888 899999999988754
No 461
>PLN03150 hypothetical protein; Provisional
Probab=99.31 E-value=7.3e-12 Score=145.50 Aligned_cols=90 Identities=37% Similarity=0.662 Sum_probs=43.1
Q ss_pred CCEEEccCCccccccCccccCCCCCCEEEccCCcCCccCCCCccccc--ceeeccccccccchhhhhccCCCCCEEeccc
Q 003296 341 LVNLNLRQNNLNGSIPNSITNMRSLIELQLGGNQLSGTIPMMPPRLQ--IALNLSSNLFEGPIPTTFARLNGLEVLDLSN 418 (833)
Q Consensus 341 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~--~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 418 (833)
++.|+|++|.++|.+|..+..+++|+.|+|++|.+.|.+|.....+. +.|+|++|.++|.+|..++.+++|+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 45566666666666666666666666666665555544332111111 1222222223333344444455555555555
Q ss_pred CcCccccchhcc
Q 003296 419 NRFSGEIPQLLA 430 (833)
Q Consensus 419 N~l~~~~p~~~~ 430 (833)
|+++|.+|..+.
T Consensus 500 N~l~g~iP~~l~ 511 (623)
T PLN03150 500 NSLSGRVPAALG 511 (623)
T ss_pred CcccccCChHHh
Confidence 555555554443
No 462
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.30 E-value=1e-12 Score=124.82 Aligned_cols=122 Identities=26% Similarity=0.344 Sum_probs=41.6
Q ss_pred ECCCCCCCCcccccCCCCCCEEECCCCCCCCccccccc-CCCCCCEEeCcCCcCCCCCCcccCCCCCCCEEEccCCcCcc
Q 003296 14 NFSKNELVSLPTFNGFAGLEVLDFSSNNLNGNINLQFD-ELVSLKSLNLSKNKFNGFLPINLGKTKALEELVLSGNAFHG 92 (833)
Q Consensus 14 ~ls~N~l~~i~~f~~l~~L~~L~Ls~N~l~~~~~~~f~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 92 (833)
.|+.+.|..++.+.+..+++.|+|++|.|+.+.. ++ .+.+|+.||||+|.|+.+. .+..++.|++|+|++|+|+.
T Consensus 3 ~lt~~~i~~~~~~~n~~~~~~L~L~~n~I~~Ie~--L~~~l~~L~~L~Ls~N~I~~l~--~l~~L~~L~~L~L~~N~I~~ 78 (175)
T PF14580_consen 3 RLTANMIEQIAQYNNPVKLRELNLRGNQISTIEN--LGATLDKLEVLDLSNNQITKLE--GLPGLPRLKTLDLSNNRISS 78 (175)
T ss_dssp ---------------------------------S----TT-TT--EEE-TTS--S--T--T----TT--EEE--SS---S
T ss_pred cccccccccccccccccccccccccccccccccc--hhhhhcCCCEEECCCCCCcccc--CccChhhhhhcccCCCCCCc
Confidence 4567777888888888899999999999987653 44 5789999999999998653 57789999999999999985
Q ss_pred cCCccc-cCCCCCCEEeccCCcCCccCC-ccccCCCCCcEEECcCCcCCC
Q 003296 93 EIPKGI-ADYRNLTLIDLSANNLSGSVP-DRIGELSKLEVLILSANNLDG 140 (833)
Q Consensus 93 ~~p~~~-~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~ 140 (833)
+ +..+ ..+++|+.|+|++|+|..... ..+..+++|++|+|.+|.++.
T Consensus 79 i-~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~ 127 (175)
T PF14580_consen 79 I-SEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCE 127 (175)
T ss_dssp --CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGG
T ss_pred c-ccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccc
Confidence 4 3344 468999999999999975322 356778999999999998863
No 463
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.29 E-value=4e-12 Score=141.32 Aligned_cols=195 Identities=35% Similarity=0.454 Sum_probs=103.4
Q ss_pred EEECCCCCCC-CcccccCCCCCCEEECCCCCCCCcccccccCCC-CCCEEeCcCCcCCCCCCcccCCCCCCCEEEccCCc
Q 003296 12 LLNFSKNELV-SLPTFNGFAGLEVLDFSSNNLNGNINLQFDELV-SLKSLNLSKNKFNGFLPINLGKTKALEELVLSGNA 89 (833)
Q Consensus 12 ~L~ls~N~l~-~i~~f~~l~~L~~L~Ls~N~l~~~~~~~f~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 89 (833)
.++++.|.+. .+.....++.++.|++.+|+++.+.+. ...+. +|+.|++++|++.. +|..+..+++|+.|++++|+
T Consensus 97 ~l~~~~~~~~~~~~~~~~~~~l~~L~l~~n~i~~i~~~-~~~~~~nL~~L~l~~N~i~~-l~~~~~~l~~L~~L~l~~N~ 174 (394)
T COG4886 97 SLDLNLNRLRSNISELLELTNLTSLDLDNNNITDIPPL-IGLLKSNLKELDLSDNKIES-LPSPLRNLPNLKNLDLSFND 174 (394)
T ss_pred eeeccccccccCchhhhcccceeEEecCCcccccCccc-cccchhhcccccccccchhh-hhhhhhccccccccccCCch
Confidence 3555566552 233344445666666666666644432 23332 66666666666653 33455566666666666666
Q ss_pred CcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCcEEECcCCcCCCCCCcccccCCccCccccccccccc-cCCh
Q 003296 90 FHGEIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQNKFSG-SVPG 168 (833)
Q Consensus 90 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~-~~p~ 168 (833)
++ .+|...+.+++|+.|++++|+++ .+|.....+..|++|.+++|++. ..+..+.++.++..+.+..|++.. ..+.
T Consensus 175 l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~~~~~~ 251 (394)
T COG4886 175 LS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLEDLPESI 251 (394)
T ss_pred hh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeeeccchh
Confidence 65 34444445666666666666665 34444444455666666666432 344455555555555555555543 1111
Q ss_pred hhhhcCCEEecccccccccCCccCCCCCCCCEEecccccCcccCC
Q 003296 169 GITRFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLSVNMLEGSLP 213 (833)
Q Consensus 169 ~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p 213 (833)
.....+++|++++|+++...+ +....+++.|++++|.+...+|
T Consensus 252 ~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~ 294 (394)
T COG4886 252 GNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALP 294 (394)
T ss_pred ccccccceecccccccccccc--ccccCccCEEeccCccccccch
Confidence 122335556666665554333 5555556666666655554433
No 464
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.28 E-value=7.6e-12 Score=139.10 Aligned_cols=178 Identities=34% Similarity=0.490 Sum_probs=88.2
Q ss_pred CCCCEEEccCCcCcccCCccccCCC-CCCEEeccCCcCCccCCccccCCCCCcEEECcCCcCCCCCCcccccCCccCccc
Q 003296 78 KALEELVLSGNAFHGEIPKGIADYR-NLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLDGRLPTSLASITTLSRFA 156 (833)
Q Consensus 78 ~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ 156 (833)
+.++.|++.+|.++ .+|.....+. +|+.|++++|++. .+|..++.+++|+.|++++|+++ .+|.....++.|+.|+
T Consensus 116 ~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ 192 (394)
T COG4886 116 TNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLD 192 (394)
T ss_pred cceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhhee
Confidence 44444444444444 2333333332 4444444444444 22233444444444444444444 2222222344444444
Q ss_pred cccccccccCChh--hhhcCCEEecccccccccCCccCCCCCCCCEEecccccCcccCCCCCCcCCcEEEcCCccccCCC
Q 003296 157 ANQNKFSGSVPGG--ITRFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMSPNLVRLRLGTNLLIGEI 234 (833)
Q Consensus 157 l~~n~l~~~~p~~--~~~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~n~l~~~~ 234 (833)
+++|+++ .+|.. ....|+.|++++|.+. ..+..+..+.++..+.+++|++...
T Consensus 193 ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~~----------------------- 247 (394)
T COG4886 193 LSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLEDL----------------------- 247 (394)
T ss_pred ccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeeec-----------------------
Confidence 4444444 22322 3344666777776432 2344556666777777777765421
Q ss_pred CccccCCCCCCCEEECCCCCCCCCCCccccCCCCCcEEEccCCccCCCChhh
Q 003296 235 PSATFTSLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNGSLPIQ 286 (833)
Q Consensus 235 ~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~ 286 (833)
...+..+++++.|++++|.++.... ++.+.+|+.|++++|.+....|..
T Consensus 248 -~~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~ 296 (394)
T COG4886 248 -PESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLI 296 (394)
T ss_pred -cchhccccccceecccccccccccc--ccccCccCEEeccCccccccchhh
Confidence 1223445556666666666664433 666666677777666666554443
No 465
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.27 E-value=1.3e-12 Score=124.03 Aligned_cols=127 Identities=25% Similarity=0.266 Sum_probs=53.6
Q ss_pred CCCCCCCEEECCCCCCCCccccc-CCCCCCEEECCCCCCCCcccccccCCCCCCEEeCcCCcCCCCCCcccCCCCCCCEE
Q 003296 5 GGIDGLKLLNFSKNELVSLPTFN-GFAGLEVLDFSSNNLNGNINLQFDELVSLKSLNLSKNKFNGFLPINLGKTKALEEL 83 (833)
Q Consensus 5 ~~l~~L~~L~ls~N~l~~i~~f~-~l~~L~~L~Ls~N~l~~~~~~~f~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 83 (833)
.+..+++.|+|++|.|+.|..++ .+.+|+.|||++|.|+.+. .|..+++|++|+|++|+|+.+.+.....+++|++|
T Consensus 16 ~n~~~~~~L~L~~n~I~~Ie~L~~~l~~L~~L~Ls~N~I~~l~--~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L 93 (175)
T PF14580_consen 16 NNPVKLRELNLRGNQISTIENLGATLDKLEVLDLSNNQITKLE--GLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQEL 93 (175)
T ss_dssp --------------------S--TT-TT--EEE-TTS--S--T--T----TT--EEE--SS---S-CHHHHHH-TT--EE
T ss_pred ccccccccccccccccccccchhhhhcCCCEEECCCCCCcccc--CccChhhhhhcccCCCCCCccccchHHhCCcCCEE
Confidence 35567899999999999997776 5899999999999999765 48889999999999999997543323468999999
Q ss_pred EccCCcCcccCC-ccccCCCCCCEEeccCCcCCccC---CccccCCCCCcEEEC
Q 003296 84 VLSGNAFHGEIP-KGIADYRNLTLIDLSANNLSGSV---PDRIGELSKLEVLIL 133 (833)
Q Consensus 84 ~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~---~~~~~~l~~L~~L~L 133 (833)
+|++|+|..... ..+..+++|+.|+|.+|.++... ...+..+|+|+.||-
T Consensus 94 ~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 94 YLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp E-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETT
T ss_pred ECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCC
Confidence 999999986432 45778999999999999997432 124567889998864
No 466
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.27 E-value=2.5e-12 Score=139.81 Aligned_cols=249 Identities=14% Similarity=0.066 Sum_probs=174.3
Q ss_pred HHHhcCCccccccCcccEEEEEEc--CCCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEecCCc
Q 003296 553 MEAVANPLNVELKTRFSTYYKAVM--PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVLASDS 629 (833)
Q Consensus 553 ~~~~~~~~~~ig~g~~g~vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~ 629 (833)
...+|.....||.|.|+.||+... .++..||+|.+.... ... .+...-..|+-+...+ .|.++|+.+..|..-+.
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l-~~~-~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~ 340 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGL-ATF-ASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQ 340 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccc-cch-HhhhcchhhhhHhhHhhcccccCCCCCCcccccc
Confidence 345677788999999999999874 478999999884221 111 1111223455555555 48899998888887788
Q ss_pred eEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCC-CCceeccceeee
Q 003296 630 AYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSL-KEPQIGDIELCK 708 (833)
Q Consensus 630 ~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~-~~~ki~dfgl~~ 708 (833)
.|+=-|||+++++.....- ...++...++++..|++.|+.++| ++.++|+|+||+||++..+ +..+++|||.+.
T Consensus 341 ~~ip~e~~~~~s~~l~~~~--~~~~d~~~~~~~~~q~~~~l~~i~---s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t 415 (524)
T KOG0601|consen 341 GYIPLEFCEGGSSSLRSVT--SQMLDEDPRLRLTAQILTALNVIH---SKLFVHLDVKPSNILISNDGFFSKLGDFGCWT 415 (524)
T ss_pred ccCchhhhcCcchhhhhHH--HHhcCcchhhhhHHHHHhcccccc---chhhhcccccccceeeccchhhhhcccccccc
Confidence 8899999999988776522 335778888999999999999999 8899999999999999876 788999999886
Q ss_pred eeCCCCCCCcccccccccccc--ccccccCCcccccCcchhhHHHHHHHHhCCCcccCCccHHHHHHHhhcccccccccc
Q 003296 709 VIDPSKSTGSLSTVAGSVGYI--PPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQGNELAKWVLRNSAQQDKLDHIL 786 (833)
Q Consensus 709 ~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (833)
.+.... ....++-+++ +|+......+-.++|+||||.-+.|.++|..--..+. +|.....
T Consensus 416 ~~~~~~-----~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~---~~~~i~~---------- 477 (524)
T KOG0601|consen 416 RLAFSS-----GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV---QSLTIRS---------- 477 (524)
T ss_pred ccceec-----ccccccccccccchhhccccccccccccccccccccccccCcccCcccc---cceeeec----------
Confidence 432221 2233344455 4444456667899999999999999999875433221 1211110
Q ss_pred cccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 003296 787 DFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMKSVLRMLLN 831 (833)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~evl~~L~~ 831 (833)
...... .....++..++..+..+|+..||.+.+...+.+-
T Consensus 478 -~~~p~~----~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~ 517 (524)
T KOG0601|consen 478 -GDTPNL----PGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEF 517 (524)
T ss_pred -ccccCC----CchHHhhhhhhhhhcCCccccchhhhhhcccchh
Confidence 001111 1112455667778889999999999988766543
No 467
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.26 E-value=1.4e-11 Score=119.60 Aligned_cols=131 Identities=15% Similarity=0.078 Sum_probs=95.4
Q ss_pred cccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEeeCCCC
Q 003296 561 NVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKG 640 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey~~~g 640 (833)
+.++.|.++.||++..+ |..|++|...... .....+.+|+++++.+.+.++++-+-++ ..+..++||||++|.
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~P~~~~~-~~~~~~lv~e~i~G~ 76 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGT-----ELLINRENEAENSKLAAEAGIGPKLYYF-DPETGVLITEFIEGS 76 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCc-----ccccCHHHHHHHHHHHHHhCCCCceEEE-eCCCCeEEEEecCCC
Confidence 46788999999999874 7889999974221 1124578999999999776665433222 334468999999998
Q ss_pred ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCC--CCCeeecCCCccceeeCCCCCceeccceeeee
Q 003296 641 TLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFT--SNPILLLDLSTRNIFLKSLKEPQIGDIELCKV 709 (833)
Q Consensus 641 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~--~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~ 709 (833)
++.+. . . ....++.+++++++.||... ...++|+|+||.||+++ ++.+++.|||.+..
T Consensus 77 ~l~~~-~------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 77 ELLTE-D------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred ccccc-c------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 87643 0 0 11235678999999999532 22369999999999998 66899999998753
No 468
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.22 E-value=3.6e-12 Score=145.12 Aligned_cols=250 Identities=18% Similarity=0.145 Sum_probs=169.0
Q ss_pred hcCCccccccCcccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 556 VANPLNVELKTRFSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 556 ~~~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
++...+-+-+|+++.++-+.- ..|...++|......+... ...+...++-.++-..+||-+|....-+......+||+
T Consensus 805 ~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~-~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~ 883 (1205)
T KOG0606|consen 805 GFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRT-NDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVG 883 (1205)
T ss_pred cceecccccCCCCcccccCCccccccccchhhhccchhhcc-ccccccCCccCccccCCCCceecccCCCCCCCCcchhh
Confidence 344455667888998887764 3455555555532222211 12233444444444456677776665566678899999
Q ss_pred eeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCC-
Q 003296 635 EYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPS- 713 (833)
Q Consensus 635 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~- 713 (833)
+|..+|+|...++... ..+..-.......+..+++||| ...++|||+||.|++...++..+++|||........
T Consensus 884 ~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~---s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~ 958 (1205)
T KOG0606|consen 884 HYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLH---SSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIP 958 (1205)
T ss_pred HHhccCCchhhhhcCC--CcccccccchhHHHHhhhhccc---cchhhcccccccchhhcccCCcccCcccccccccccc
Confidence 9999999999998743 3444444455666788999999 666999999999999999999999999844322100
Q ss_pred --------------------CC-----C---CccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCcccCC
Q 003296 714 --------------------KS-----T---GSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVNQG 765 (833)
Q Consensus 714 --------------------~~-----~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~~~ 765 (833)
.. . ..-....||+.|.|||...+......+|+|++|++++|.++|.+||...
T Consensus 959 p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~ 1038 (1205)
T KOG0606|consen 959 PTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAE 1038 (1205)
T ss_pred CcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCc
Confidence 00 0 0012357999999999999999999999999999999999999999754
Q ss_pred ccHHHHHHHhhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCCCCCCCCHH
Q 003296 766 NELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVSPEARPKMK 823 (833)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rps~~ 823 (833)
..- ..++.+....++ ++........++.+++.+.+..+|.+|-.|.
T Consensus 1039 tpq-----------~~f~ni~~~~~~-~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1039 TPQ-----------QIFENILNRDIP-WPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred chh-----------hhhhccccCCCC-CCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 321 111222222221 1222234455677888889999999997665
No 469
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.21 E-value=5e-13 Score=141.99 Aligned_cols=182 Identities=27% Similarity=0.447 Sum_probs=136.0
Q ss_pred CCCCCCEEECCCCCCCCCCCccccCCCCCcEEEccCCccCCCChhhhCCCCCCcEEEccCCcCCCcCchhhcCCCcCcee
Q 003296 241 SLEKLTYLELDNNSFTGMIPQQLGSCRSLTLLNLAQNELNGSLPIQLGSLGILQVMNLQLNKLSGEIPSQFSQLKLLSTM 320 (833)
Q Consensus 241 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 320 (833)
.+.--...||+.|++. .+|..+..+..|+.+.|.+|.+. .+|..+.++..|+++||+.|+++ ..|..+..|+ |+.|
T Consensus 73 ~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvl 148 (722)
T KOG0532|consen 73 DLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVL 148 (722)
T ss_pred cccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeE
Confidence 3444566888888888 56777888888888889998887 77888888888899999999888 5566666665 7888
Q ss_pred eccCCcCcccCccccccCCCCCEEEccCCccccccCccccCCCCCCEEEccCCcCCccCCCCcccccceeeccccccccc
Q 003296 321 NISWNSLSGSIPSFLSNLTNLVNLNLRQNNLNGSIPNSITNMRSLIELQLGGNQLSGTIPMMPPRLQIALNLSSNLFEGP 400 (833)
Q Consensus 321 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~Ls~N~l~~~ 400 (833)
-+++|+++ .+|..++.+..|..||.+.|.+. .+|..++++.+|+.|.+..|++....+....-....||+|.|+++ .
T Consensus 149 i~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~~lp~El~~LpLi~lDfScNkis-~ 225 (722)
T KOG0532|consen 149 IVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLEDLPEELCSLPLIRLDFSCNKIS-Y 225 (722)
T ss_pred EEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhhhCCHHHhCCceeeeecccCcee-e
Confidence 88998887 67777888888888999999887 677788888888888888888874433322111255677777766 5
Q ss_pred hhhhhccCCCCCEEecccCcCccccchhcc
Q 003296 401 IPTTFARLNGLEVLDLSNNRFSGEIPQLLA 430 (833)
Q Consensus 401 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 430 (833)
+|-.|..++.|++|-|.+|.+. ..|..+.
T Consensus 226 iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC 254 (722)
T KOG0532|consen 226 LPVDFRKMRHLQVLQLENNPLQ-SPPAQIC 254 (722)
T ss_pred cchhhhhhhhheeeeeccCCCC-CChHHHH
Confidence 6677777777777777777775 3444443
No 470
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.19 E-value=2.7e-12 Score=142.76 Aligned_cols=244 Identities=29% Similarity=0.334 Sum_probs=142.4
Q ss_pred CCCCCEEECCCCCCCCc-ccccCCCCCCEEECCCCCCCCcccccccCCCCCCEEeCcCCcCCCCCCcccCCCCCCCEEEc
Q 003296 7 IDGLKLLNFSKNELVSL-PTFNGFAGLEVLDFSSNNLNGNINLQFDELVSLKSLNLSKNKFNGFLPINLGKTKALEELVL 85 (833)
Q Consensus 7 l~~L~~L~ls~N~l~~i-~~f~~l~~L~~L~Ls~N~l~~~~~~~f~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 85 (833)
+..++.+++..|.+..+ .....+.+|+.|++.+|+|..+... +..+++|++|+|++|.|+.+.+ +..++.|+.|++
T Consensus 71 l~~l~~l~l~~n~i~~~~~~l~~~~~l~~l~l~~n~i~~i~~~-l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L~l 147 (414)
T KOG0531|consen 71 LTSLKELNLRQNLIAKILNHLSKLKSLEALDLYDNKIEKIENL-LSSLVNLQVLDLSFNKITKLEG--LSTLTLLKELNL 147 (414)
T ss_pred hHhHHhhccchhhhhhhhcccccccceeeeeccccchhhcccc-hhhhhcchheeccccccccccc--hhhccchhhhee
Confidence 45566666777777763 4466777777777777777765442 5667777777777777776543 444555777777
Q ss_pred cCCcCcccCCccccCCCCCCEEeccCCcCCccCC-ccccCCCCCcEEECcCCcCCCCCCcccccCCccCccccccccccc
Q 003296 86 SGNAFHGEIPKGIADYRNLTLIDLSANNLSGSVP-DRIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQNKFSG 164 (833)
Q Consensus 86 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~ 164 (833)
++|.|+.+ ..+..+.+|+.+++++|++..+.+ . ...+.+|+.+++++|.+... ..+..+..+..+++..|.++.
T Consensus 148 ~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i--~~~~~~~~l~~~~l~~n~i~~ 222 (414)
T KOG0531|consen 148 SGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREI--EGLDLLKKLVLLSLLDNKISK 222 (414)
T ss_pred ccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcc--cchHHHHHHHHhhccccccee
Confidence 77777643 345557777777777777765444 2 46677777777777776532 233334444444555566554
Q ss_pred cCChhhhh--cCCEEecccccccccCCccCCCCCCCCEEecccccCcccCCCCCCcCCcEEEcCCccccCCCCccccCCC
Q 003296 165 SVPGGITR--FLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLSVNMLEGSLPQNMSPNLVRLRLGTNLLIGEIPSATFTSL 242 (833)
Q Consensus 165 ~~p~~~~~--~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~n~l~~~~~~~~f~~l 242 (833)
..+..... +|+.+++++|.+... +..+..+.++..|++..|.+...- .+...
T Consensus 223 ~~~l~~~~~~~L~~l~l~~n~i~~~-~~~~~~~~~l~~l~~~~n~~~~~~-------------------------~~~~~ 276 (414)
T KOG0531|consen 223 LEGLNELVMLHLRELYLSGNRISRS-PEGLENLKNLPVLDLSSNRISNLE-------------------------GLERL 276 (414)
T ss_pred ccCcccchhHHHHHHhcccCccccc-cccccccccccccchhhccccccc-------------------------ccccc
Confidence 33322222 255666666655432 133444555555666655554221 12234
Q ss_pred CCCCEEECCCCCCCCC---CCc-cccCCCCCcEEEccCCccCCCCh
Q 003296 243 EKLTYLELDNNSFTGM---IPQ-QLGSCRSLTLLNLAQNELNGSLP 284 (833)
Q Consensus 243 ~~L~~L~L~~N~l~~~---~~~-~~~~l~~L~~L~L~~N~l~~~~p 284 (833)
..+..+.+..|.+... ... .....++++...+..|.+....+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 277 PKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKISS 322 (414)
T ss_pred chHHHhccCcchhcchhhhhccccccccccccccccccCccccccc
Confidence 4555555666655421 111 14556777788888887765444
No 471
>PLN03150 hypothetical protein; Provisional
Probab=99.18 E-value=3.7e-11 Score=139.66 Aligned_cols=108 Identities=32% Similarity=0.633 Sum_probs=70.6
Q ss_pred CCEEeCcCCcCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCcEEECcC
Q 003296 56 LKSLNLSKNKFNGFLPINLGKTKALEELVLSGNAFHGEIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSA 135 (833)
Q Consensus 56 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 135 (833)
++.|+|++|.+++.+|..++.+++|+.|+|++|.+++.+|..++.+++|+.|+|++|++++.+|..++++++|++|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 56666666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred CcCCCCCCcccccC-CccCcccccccccc
Q 003296 136 NNLDGRLPTSLASI-TTLSRFAANQNKFS 163 (833)
Q Consensus 136 N~l~~~~p~~~~~l-~~L~~l~l~~n~l~ 163 (833)
|+++|.+|..+..+ .++..+++.+|...
T Consensus 500 N~l~g~iP~~l~~~~~~~~~l~~~~N~~l 528 (623)
T PLN03150 500 NSLSGRVPAALGGRLLHRASFNFTDNAGL 528 (623)
T ss_pred CcccccCChHHhhccccCceEEecCCccc
Confidence 66666666666543 34445555555543
No 472
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.14 E-value=3.5e-10 Score=109.81 Aligned_cols=139 Identities=14% Similarity=0.027 Sum_probs=98.0
Q ss_pred cccccCcccEEEEEEcCC-------CceEEEEEccccc-----hhh----h---------ccChhHHH----HHHHHHhc
Q 003296 561 NVELKTRFSTYYKAVMPS-------GMSYFIKKLNWSD-----KIF----Q---------LGSHHKFD----KELEVLGK 611 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~~~-------~~~vavK~~~~~~-----~~~----~---------~~~~~~~~----~E~~~l~~ 611 (833)
..||.|.=+.||.|...+ +..+|||..+... +.. + ....+.+. +|.+.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 478999999999998653 5799999764211 000 0 01122344 89999999
Q ss_pred CCC--CCcccceEEEecCCceEEEEeeCCCCChhh-hhhcCCCCCCCHHHHHHHHHHHHHHHHhh-hcCCCCCeeecCCC
Q 003296 612 LSN--SNVMTPLAYVLASDSAYLFYEYAPKGTLFD-VLHGCLENALDWASRYSIAVGVAQGLAFL-HGFTSNPILLLDLS 687 (833)
Q Consensus 612 l~H--~niv~~~~~~~~~~~~~lv~ey~~~g~L~~-~l~~~~~~~l~~~~~~~i~~~i~~~l~yl-H~~~~~~iiHrdlk 687 (833)
+.. -++-+.+++ ..-++||||+.++.+.. .+++ ..++..+...+..+++.++.++ | ..+|||+|++
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd---~~~~~~~~~~i~~~i~~~l~~l~H---~~glVHGDLs 152 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD---AKLNDEEMKNAYYQVLSMMKQLYK---ECNLVHADLS 152 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc---cccCHHHHHHHHHHHHHHHHHHHH---hCCeecCCCC
Confidence 864 345555543 56789999997654422 2322 2344455667789999999999 7 7799999999
Q ss_pred ccceeeCCCCCceeccceeeeee
Q 003296 688 TRNIFLKSLKEPQIGDIELCKVI 710 (833)
Q Consensus 688 ~~Nill~~~~~~ki~dfgl~~~~ 710 (833)
+.||+++ ++.+.++|||.+...
T Consensus 153 ~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 153 EYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred HHHEEEE-CCcEEEEECCCceeC
Confidence 9999996 467999999987654
No 473
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.13 E-value=4.2e-12 Score=124.55 Aligned_cols=129 Identities=28% Similarity=0.286 Sum_probs=77.7
Q ss_pred CCCCCEEECCCCCCCCcc-cccCCCCCCEEECCCCCCCCcccccccCCCCCCEEeCcCCcCCCCCCcccCCCCCCCEEEc
Q 003296 7 IDGLKLLNFSKNELVSLP-TFNGFAGLEVLDFSSNNLNGNINLQFDELVSLKSLNLSKNKFNGFLPINLGKTKALEELVL 85 (833)
Q Consensus 7 l~~L~~L~ls~N~l~~i~-~f~~l~~L~~L~Ls~N~l~~~~~~~f~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 85 (833)
+..|+.+|||+|.|+.+. +..-.+.++.|++|+|.|..+.. +..|++|+.||||+|.++. +.++-..+.+.++|.|
T Consensus 283 Wq~LtelDLS~N~I~~iDESvKL~Pkir~L~lS~N~i~~v~n--La~L~~L~~LDLS~N~Ls~-~~Gwh~KLGNIKtL~L 359 (490)
T KOG1259|consen 283 WQELTELDLSGNLITQIDESVKLAPKLRRLILSQNRIRTVQN--LAELPQLQLLDLSGNLLAE-CVGWHLKLGNIKTLKL 359 (490)
T ss_pred HhhhhhccccccchhhhhhhhhhccceeEEeccccceeeehh--hhhcccceEeecccchhHh-hhhhHhhhcCEeeeeh
Confidence 345666677777776663 34556667777777776665443 5556677777777776663 3444455666666777
Q ss_pred cCCcCcccCCccccCCCCCCEEeccCCcCCccC-CccccCCCCCcEEECcCCcCCC
Q 003296 86 SGNAFHGEIPKGIADYRNLTLIDLSANNLSGSV-PDRIGELSKLEVLILSANNLDG 140 (833)
Q Consensus 86 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~ 140 (833)
++|.|... ..++.+-+|..||+++|+|.... -..+++|+-|++|.|.+|.+.+
T Consensus 360 a~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 360 AQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred hhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 76666532 34555556666666666665321 1345666666666666666653
No 474
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.13 E-value=8e-12 Score=139.02 Aligned_cols=220 Identities=25% Similarity=0.261 Sum_probs=116.0
Q ss_pred CCCCCCEEECCCCCCCCcccccccCCCCCCEEeCcCCcCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEE
Q 003296 28 GFAGLEVLDFSSNNLNGNINLQFDELVSLKSLNLSKNKFNGFLPINLGKTKALEELVLSGNAFHGEIPKGIADYRNLTLI 107 (833)
Q Consensus 28 ~l~~L~~L~Ls~N~l~~~~~~~f~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 107 (833)
.+..++.+++..|.|.. .......+++|..|+|.+|+|..+.. .+..+++|++|+|++|.|+.+ ..+..++.|+.|
T Consensus 70 ~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i~~-~l~~~~~L~~L~ls~N~I~~i--~~l~~l~~L~~L 145 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKIEN-LLSSLVNLQVLDLSFNKITKL--EGLSTLTLLKEL 145 (414)
T ss_pred HhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhccc-chhhhhcchheeccccccccc--cchhhccchhhh
Confidence 45566666677777664 22235566777777777777765332 255667777777777777644 234555567777
Q ss_pred eccCCcCCccCCccccCCCCCcEEECcCCcCCCCCC-cccccCCccCccccccccccccCChhhhhcCCEEecccccccc
Q 003296 108 DLSANNLSGSVPDRIGELSKLEVLILSANNLDGRLP-TSLASITTLSRFAANQNKFSGSVPGGITRFLRNLDLSYNKLLG 186 (833)
Q Consensus 108 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~l~l~~n~l~~~~p~~~~~~L~~L~Ls~N~l~~ 186 (833)
++++|.|+.+ ..|..+++|+.+++++|.++...+ . ...+.+++.+++..|.+...........+..+++..|.++.
T Consensus 146 ~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i~~~~~~~~l~~~~l~~n~i~~ 222 (414)
T KOG0531|consen 146 NLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREIEGLDLLKKLVLLSLLDNKISK 222 (414)
T ss_pred eeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcccchHHHHHHHHhhccccccee
Confidence 7777777632 345556677777777777665444 2 34555555666666655433332223333334555554443
Q ss_pred cCCccCCCCCCCCEEecccccCcccCCCCCCcCCcEEEcCCccccCCCCccccCCCCCCCEEECCCCCCCCCCCccccCC
Q 003296 187 VIPIDLLSHPNLQTIDLSVNMLEGSLPQNMSPNLVRLRLGTNLLIGEIPSATFTSLEKLTYLELDNNSFTGMIPQQLGSC 266 (833)
Q Consensus 187 ~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~n~l~~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l 266 (833)
..+.....+.+|+.+++++|.+.. ++ ..+..+.++..|++.+|++.... .+...
T Consensus 223 ~~~l~~~~~~~L~~l~l~~n~i~~-----------------------~~-~~~~~~~~l~~l~~~~n~~~~~~--~~~~~ 276 (414)
T KOG0531|consen 223 LEGLNELVMLHLRELYLSGNRISR-----------------------SP-EGLENLKNLPVLDLSSNRISNLE--GLERL 276 (414)
T ss_pred ccCcccchhHHHHHHhcccCcccc-----------------------cc-ccccccccccccchhhccccccc--ccccc
Confidence 322111111124444444444331 10 12334556666666666665432 23334
Q ss_pred CCCcEEEccCCccC
Q 003296 267 RSLTLLNLAQNELN 280 (833)
Q Consensus 267 ~~L~~L~L~~N~l~ 280 (833)
+.+..+.+..|.+.
T Consensus 277 ~~~~~~~~~~~~~~ 290 (414)
T KOG0531|consen 277 PKLSELWLNDNKLA 290 (414)
T ss_pred chHHHhccCcchhc
Confidence 44555555555543
No 475
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.12 E-value=4.2e-10 Score=114.42 Aligned_cols=143 Identities=20% Similarity=0.186 Sum_probs=111.1
Q ss_pred cccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCC--CcccceEEEecC---CceEEEEe
Q 003296 561 NVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNS--NVMTPLAYVLAS---DSAYLFYE 635 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~--niv~~~~~~~~~---~~~~lv~e 635 (833)
+.++.|.++.||++...+|..+++|....... ......+.+|+++++.+++. .+.+++.++... +..++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~---~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGAL---LPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCccc---CcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence 56889999999999987778999999842211 11345789999999999764 456677776654 36789999
Q ss_pred eCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCC--------------------------------------
Q 003296 636 YAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFT-------------------------------------- 677 (833)
Q Consensus 636 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~-------------------------------------- 677 (833)
|++|+++.+.+.. ..++..++..++.+++++|++||+..
T Consensus 81 ~i~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 81 RVDGRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred EeCCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 9999988876542 34778888888999999999998531
Q ss_pred ---------------CCCeeecCCCccceeeCC--CCCceeccceeeee
Q 003296 678 ---------------SNPILLLDLSTRNIFLKS--LKEPQIGDIELCKV 709 (833)
Q Consensus 678 ---------------~~~iiHrdlk~~Nill~~--~~~~ki~dfgl~~~ 709 (833)
...++|+|+.|.||+++. ++.+.+.||+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 245799999999999998 56678999987764
No 476
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.03 E-value=1.6e-09 Score=118.95 Aligned_cols=166 Identities=16% Similarity=0.180 Sum_probs=122.3
Q ss_pred cCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEeeCCCCChhhhhhcCCCCCCC
Q 003296 576 MPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALD 655 (833)
Q Consensus 576 ~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~ 655 (833)
..+|.+|.|...++... .......+-++.|+.+|||||++++..++.++..|||+|-+. -|..++++. .
T Consensus 34 k~~~~~vsVF~~~~~~~----~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l-----~ 102 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNG----EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKEL-----G 102 (690)
T ss_pred eccCCceEEEEEeCCCc----hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHh-----H
Confidence 35788999988853322 223456778889999999999999999999999999999875 677777753 2
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCCcccccccccccccccccc
Q 003296 656 WASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTGSLSTVAGSVGYIPPEYAY 735 (833)
Q Consensus 656 ~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 735 (833)
.....-.+.||+.||.|||+ ..+++|++|--+.|+++..|+-|+++|-++......... .....--..|..|+.+.
T Consensus 103 ~~~v~~Gl~qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~--~~~~~~~~s~~~P~~~~ 178 (690)
T KOG1243|consen 103 KEEVCLGLFQILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAP--AKSLYLIESFDDPEEID 178 (690)
T ss_pred HHHHHHHHHHHHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcc--cccchhhhcccChhhcC
Confidence 33344457899999999997 457999999999999999999999999887654322110 00111112355666443
Q ss_pred CCcccccCcchhhHHHHHHHHhC
Q 003296 736 TMRVTMAGNVYSFGVILLELLTG 758 (833)
Q Consensus 736 ~~~~~~~~Dv~S~Gvvl~elltg 758 (833)
... ...|.|-|||+++|++.|
T Consensus 179 ~s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 179 PSE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred ccc--cchhhhhHHHHHHHHhCc
Confidence 222 456999999999999999
No 477
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=99.00 E-value=2e-10 Score=89.76 Aligned_cols=59 Identities=34% Similarity=0.419 Sum_probs=33.0
Q ss_pred CCCEEECCCCCCCCcccccccCCCCCCEEeCcCCcCCCCCCcccCCCCCCCEEEccCCc
Q 003296 31 GLEVLDFSSNNLNGNINLQFDELVSLKSLNLSKNKFNGFLPINLGKTKALEELVLSGNA 89 (833)
Q Consensus 31 ~L~~L~Ls~N~l~~~~~~~f~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 89 (833)
+|++|++++|+|+.+.+..|.++++|++|++++|+|+.+.|..|.++++|++|+|++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 45555555555555555555555555555555555555555555555555555555554
No 478
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.96 E-value=3.6e-09 Score=98.64 Aligned_cols=135 Identities=21% Similarity=0.230 Sum_probs=101.9
Q ss_pred cccccCcccEEEEEEcCCCceEEEEEccccc----hhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEEee
Q 003296 561 NVELKTRFSTYYKAVMPSGMSYFIKKLNWSD----KIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFYEY 636 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ey 636 (833)
..+++|+=+.+|.+.+ -|..+++|.-.++. .....-...+-.+|++++++++--.|-..+=|..+++...|+|||
T Consensus 2 ~~i~~GAEa~i~~~~~-~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDF-LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeec-cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 3578899999999976 34456666432221 111111235678899999999766776667778888999999999
Q ss_pred CCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeee
Q 003296 637 APKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKV 709 (833)
Q Consensus 637 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~ 709 (833)
.+|-.|.+.+... +..++..+-.-+.-|| ..+|||+|+.++||.+..+. +.++|||++..
T Consensus 81 I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH---~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA---------RPDLLREVGRLVGKLH---KAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc---------chHHHHHHHHHHHHHH---hcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9999999888752 2456666777778899 88999999999999997654 88999999874
No 479
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.95 E-value=4.7e-10 Score=87.71 Aligned_cols=59 Identities=37% Similarity=0.513 Sum_probs=31.2
Q ss_pred CCCEEeCcCCcCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEeccCCc
Q 003296 55 SLKSLNLSKNKFNGFLPINLGKTKALEELVLSGNAFHGEIPKGIADYRNLTLIDLSANN 113 (833)
Q Consensus 55 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 113 (833)
+|++|++++|+|+.+.+..|.++++|++|+|++|.++.+.|.+|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 45555555555555544555555555555555555555545555555555555555554
No 480
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.95 E-value=9.3e-11 Score=115.26 Aligned_cols=130 Identities=25% Similarity=0.274 Sum_probs=94.1
Q ss_pred CCCCEEECCCCCCCCcccccccCCCCCCEEeCcCCcCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEec
Q 003296 30 AGLEVLDFSSNNLNGNINLQFDELVSLKSLNLSKNKFNGFLPINLGKTKALEELVLSGNAFHGEIPKGIADYRNLTLIDL 109 (833)
Q Consensus 30 ~~L~~L~Ls~N~l~~~~~~~f~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 109 (833)
..|+.||||+|.|+.+ ..+..-++.++.|++|+|.|..+. .+..+++|+.||||+|.++ .+...=..+.|.+.|.|
T Consensus 284 q~LtelDLS~N~I~~i-DESvKL~Pkir~L~lS~N~i~~v~--nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~L 359 (490)
T KOG1259|consen 284 QELTELDLSGNLITQI-DESVKLAPKLRRLILSQNRIRTVQ--NLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKL 359 (490)
T ss_pred hhhhhccccccchhhh-hhhhhhccceeEEeccccceeeeh--hhhhcccceEeecccchhH-hhhhhHhhhcCEeeeeh
Confidence 4578888888888754 345666788888888888887543 3777888888888888877 44445556778888888
Q ss_pred cCCcCCccCCccccCCCCCcEEECcCCcCCCCC-CcccccCCccCcccccccccccc
Q 003296 110 SANNLSGSVPDRIGELSKLEVLILSANNLDGRL-PTSLASITTLSRFAANQNKFSGS 165 (833)
Q Consensus 110 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~l~l~~n~l~~~ 165 (833)
+.|.|... ..++.|-+|..||+++|+|.... -..+++++.|+.+.+.+|.+.+.
T Consensus 360 a~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~ 414 (490)
T KOG1259|consen 360 AQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGS 414 (490)
T ss_pred hhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcccc
Confidence 88887633 34677778888888888886432 24677777777777777777643
No 481
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.93 E-value=7.8e-09 Score=95.72 Aligned_cols=147 Identities=20% Similarity=0.226 Sum_probs=108.2
Q ss_pred CccccccCcccEEEEEEcCCCceEEEEEccccc----hhhhccChhHHHHHHHHHhcCCCCCcccceEEEecCCceEEEE
Q 003296 559 PLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSD----KIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLASDSAYLFY 634 (833)
Q Consensus 559 ~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 634 (833)
...++-+|+-+.|+++.. .|+...||.-..+. .....-..++-.+|++++.+++--.|....-++.+...-.|+|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 456788999999999987 67777777542221 1111223567889999999997666666666777777788999
Q ss_pred eeCCC-CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCC---Cceeccceeeee
Q 003296 635 EYAPK-GTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLK---EPQIGDIELCKV 709 (833)
Q Consensus 635 ey~~~-g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~---~~ki~dfgl~~~ 709 (833)
||.++ .++.+++................+..+-+.+.-|| ...|||+|+..+||++..++ .+.+.|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH---~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLH---DNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhh---hCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 99977 47888876543332333333667888888899999 88999999999999997654 347899998754
No 482
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.93 E-value=5e-10 Score=132.80 Aligned_cols=202 Identities=20% Similarity=0.221 Sum_probs=141.2
Q ss_pred CCCCCCEEECCCCCCCCcccccCCCCCCEEECCCCC--CCCcccccccCCCCCCEEeCcCCcCCCCCCcccCCCCCCCEE
Q 003296 6 GIDGLKLLNFSKNELVSLPTFNGFAGLEVLDFSSNN--LNGNINLQFDELVSLKSLNLSKNKFNGFLPINLGKTKALEEL 83 (833)
Q Consensus 6 ~l~~L~~L~ls~N~l~~i~~f~~l~~L~~L~Ls~N~--l~~~~~~~f~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 83 (833)
+....+.+.+-+|.+..++.-...+.|+.|-+..|. +..+....|..++.|++||||+|.=-+.+|..++.+-+|++|
T Consensus 521 ~~~~~rr~s~~~~~~~~~~~~~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL 600 (889)
T KOG4658|consen 521 SWNSVRRMSLMNNKIEHIAGSSENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYL 600 (889)
T ss_pred chhheeEEEEeccchhhccCCCCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcc
Confidence 345667888888888887654566689999999996 666667779999999999999987556789999999999999
Q ss_pred EccCCcCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCcEEECcCCc--CCCCCCcccccCCccCcccccccc
Q 003296 84 VLSGNAFHGEIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANN--LDGRLPTSLASITTLSRFAANQNK 161 (833)
Q Consensus 84 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~--l~~~~p~~~~~l~~L~~l~l~~n~ 161 (833)
+|++..++ .+|..+.+|..|.+||+..+.-...+|.....|++|++|.+-... .+...-..+..+.+|+.+......
T Consensus 601 ~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s 679 (889)
T KOG4658|consen 601 DLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISS 679 (889)
T ss_pred cccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecch
Confidence 99999998 889999999999999999988666678888889999999986654 222333344455555555443222
Q ss_pred ccccCChh----hhhcCCEEecccccccccCCccCCCCCCCCEEecccccCc
Q 003296 162 FSGSVPGG----ITRFLRNLDLSYNKLLGVIPIDLLSHPNLQTIDLSVNMLE 209 (833)
Q Consensus 162 l~~~~p~~----~~~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~ 209 (833)
.....+-. +....+.+.+..+... ..+..+..+.+|+.|.+.++.+.
T Consensus 680 ~~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~ 730 (889)
T KOG4658|consen 680 VLLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGIS 730 (889)
T ss_pred hHhHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCc
Confidence 20000100 0111223333222222 23345666778888888887765
No 483
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.90 E-value=1.7e-10 Score=119.64 Aligned_cols=210 Identities=23% Similarity=0.254 Sum_probs=114.2
Q ss_pred cCCCCCCEEECCCCCCCCccc-ccccCCCCCCEEeCcCCcCCCCCCc--ccCCCCCCCEEEccCCcCcccCCcc-ccCCC
Q 003296 27 NGFAGLEVLDFSSNNLNGNIN-LQFDELVSLKSLNLSKNKFNGFLPI--NLGKTKALEELVLSGNAFHGEIPKG-IADYR 102 (833)
Q Consensus 27 ~~l~~L~~L~Ls~N~l~~~~~-~~f~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~ 102 (833)
.++.+|+...|.+..+..... .....|++++.||||+|-|..+.|. ....+++|+.|+|+.|++....... -..++
T Consensus 118 sn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 356667777777766653221 3455677777777777776654432 2456777777777777765332221 12455
Q ss_pred CCCEEeccCCcCCc-cCCccccCCCCCcEEECcCCcCCCCCCcccccCCccCccccccccccccCChhhhhcCCEEeccc
Q 003296 103 NLTLIDLSANNLSG-SVPDRIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQNKFSGSVPGGITRFLRNLDLSY 181 (833)
Q Consensus 103 ~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~~L~~L~Ls~ 181 (833)
.|+.|.|+.|.++. .+-.....+++|+.|+|..|....... .+..++..|+.|||++
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~----------------------~~~~i~~~L~~LdLs~ 255 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKA----------------------TSTKILQTLQELDLSN 255 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceec----------------------chhhhhhHHhhccccC
Confidence 66666666666652 111223345666666666664222222 2233344455666666
Q ss_pred ccccccCC-ccCCCCCCCCEEecccccCccc-CCC-------CCCcCCcEEEcCCccccCCCCccccCCCCCCCEEECCC
Q 003296 182 NKLLGVIP-IDLLSHPNLQTIDLSVNMLEGS-LPQ-------NMSPNLVRLRLGTNLLIGEIPSATFTSLEKLTYLELDN 252 (833)
Q Consensus 182 N~l~~~~~-~~~~~~~~L~~L~Ls~N~l~~~-~p~-------~~~~~L~~L~l~~n~l~~~~~~~~f~~l~~L~~L~L~~ 252 (833)
|++..... ...+.++.|+.|.++.+.+... .|. ...+.|+.|++..|++...-.-.....+++|+.|.+..
T Consensus 256 N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~ 335 (505)
T KOG3207|consen 256 NNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITL 335 (505)
T ss_pred CcccccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccc
Confidence 65543221 2234556666666666666532 111 12256777777777652211112334467788888888
Q ss_pred CCCCCC
Q 003296 253 NSFTGM 258 (833)
Q Consensus 253 N~l~~~ 258 (833)
|.++..
T Consensus 336 n~ln~e 341 (505)
T KOG3207|consen 336 NYLNKE 341 (505)
T ss_pred cccccc
Confidence 888643
No 484
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.89 E-value=2.2e-10 Score=118.75 Aligned_cols=159 Identities=20% Similarity=0.223 Sum_probs=111.3
Q ss_pred CCCCCCCEEECCCCCCCCcc---cccCCCCCCEEECCCCCCCCccc--ccccCCCCCCEEeCcCCcCCCCCCcc-cCCCC
Q 003296 5 GGIDGLKLLNFSKNELVSLP---TFNGFAGLEVLDFSSNNLNGNIN--LQFDELVSLKSLNLSKNKFNGFLPIN-LGKTK 78 (833)
Q Consensus 5 ~~l~~L~~L~ls~N~l~~i~---~f~~l~~L~~L~Ls~N~l~~~~~--~~f~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~ 78 (833)
.++.+|+.+.|.+......+ ....|++++.||||.|-+....+ .-...|++|+.|+||.|++....... -..++
T Consensus 118 sn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 35778888888888777654 35678899999999998875433 23567899999999999987433322 23678
Q ss_pred CCCEEEccCCcCccc-CCccccCCCCCCEEeccCCcCCccCCccccCCCCCcEEECcCCcCCCCCC-cccccCCccCccc
Q 003296 79 ALEELVLSGNAFHGE-IPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLDGRLP-TSLASITTLSRFA 156 (833)
Q Consensus 79 ~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~l~ 156 (833)
+|+.|.|+.|.++.- +-.....+++|+.|+|..|....+-......+..|+.|||++|++-.... ...+.++.|..|.
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Ln 277 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLN 277 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhh
Confidence 899999999988731 22234567899999999996444555566778889999999998864321 2344555555555
Q ss_pred ccccccc
Q 003296 157 ANQNKFS 163 (833)
Q Consensus 157 l~~n~l~ 163 (833)
++.+.+.
T Consensus 278 ls~tgi~ 284 (505)
T KOG3207|consen 278 LSSTGIA 284 (505)
T ss_pred ccccCcc
Confidence 5555543
No 485
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.82 E-value=3.3e-10 Score=114.43 Aligned_cols=41 Identities=27% Similarity=0.207 Sum_probs=22.2
Q ss_pred ccCCCCCcEEECcCCcCCCCCCccc----ccCCccCccccccccc
Q 003296 122 IGELSKLEVLILSANNLDGRLPTSL----ASITTLSRFAANQNKF 162 (833)
Q Consensus 122 ~~~l~~L~~L~Ls~N~l~~~~p~~~----~~l~~L~~l~l~~n~l 162 (833)
+-..++|++|+||.|.|.-.-+..| .+++.|++|.+.+|-+
T Consensus 88 L~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Gl 132 (382)
T KOG1909|consen 88 LLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGL 132 (382)
T ss_pred HhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCC
Confidence 3345567777777776654333322 3345555555555544
No 486
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.79 E-value=1.5e-07 Score=100.44 Aligned_cols=167 Identities=23% Similarity=0.289 Sum_probs=125.9
Q ss_pred ccEEEEEEc-CCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCCcccceEEEec----CCceEEEEeeCCC-CC
Q 003296 568 FSTYYKAVM-PSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSNVMTPLAYVLA----SDSAYLFYEYAPK-GT 641 (833)
Q Consensus 568 ~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~----~~~~~lv~ey~~~-g~ 641 (833)
-.+.||+.. .||..|+.||++ ..+.... ..-..=++.++++.|+|||++.+++.. +..+++||+|.|+ ++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlh-g~r~~~~---nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~T 364 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLH-GDRDQST---NKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPT 364 (655)
T ss_pred cceeEeeeeccCCceeeeeeec-cccccCc---ccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCch
Confidence 457899986 589999999993 3222221 122345788999999999999998873 4568999999985 68
Q ss_pred hhhhhhcCC-------------CCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeee
Q 003296 642 LFDVLHGCL-------------ENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCK 708 (833)
Q Consensus 642 L~~~l~~~~-------------~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~ 708 (833)
|.++-.... ....++...+.++.|++.||.++| +.|..-+-+.|.+|+++.+.+++|+..|+..
T Consensus 365 L~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIH---ssGLAck~L~~~kIlv~G~~RIriS~C~i~D 441 (655)
T KOG3741|consen 365 LYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIH---SSGLACKTLDLKKILVTGKMRIRISGCGIMD 441 (655)
T ss_pred HHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHH---hcCceeecccHhHeEeeCcceEEEeccccee
Confidence 887643211 124778899999999999999999 6788889999999999999899998888777
Q ss_pred eeCCCCCCCccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCC
Q 003296 709 VIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKT 760 (833)
Q Consensus 709 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~ 760 (833)
...++. + |-+.+ -.+-|.=.||.+++.+.||..
T Consensus 442 vl~~d~---------~-------~~le~---~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 442 VLQEDP---------T-------EPLES---QQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred eecCCC---------C-------cchhH---HhhhhHHHHHHHHHHHhhccc
Confidence 664332 0 11111 235688889999999999964
No 487
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.78 E-value=5.1e-08 Score=100.44 Aligned_cols=145 Identities=17% Similarity=0.110 Sum_probs=101.2
Q ss_pred cccccCcccEEEEEEcCCCceEEEEEccccchh--hhc-----cChhHHHHHHHHHhcCCCCC--cccceEEEec-----
Q 003296 561 NVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKI--FQL-----GSHHKFDKELEVLGKLSNSN--VMTPLAYVLA----- 626 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~--~~~-----~~~~~~~~E~~~l~~l~H~n--iv~~~~~~~~----- 626 (833)
+++-......|++... +|+.|.||+....... ... .....+.+|.+.+.++..-+ +.+.+++...
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 3333344455777766 6788999977322110 000 11225889999998885433 3444566543
Q ss_pred CCceEEEEeeCCCC-ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCC-------CCC
Q 003296 627 SDSAYLFYEYAPKG-TLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKS-------LKE 698 (833)
Q Consensus 627 ~~~~~lv~ey~~~g-~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~-------~~~ 698 (833)
...-++||||+++- +|.+++........+...+..++.+++..++-|| ..+|+|+|++++|||++. ++.
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH---~~Gi~HgDL~~~NiLl~~~~~~~~~~~~ 183 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMH---AAGINHRDCYICHFLLHLPFPGREEDLK 183 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCccCCCChhhEEEeccccCCCCCce
Confidence 23478999999876 8999886422234556677789999999999999 889999999999999985 467
Q ss_pred ceeccceeeee
Q 003296 699 PQIGDIELCKV 709 (833)
Q Consensus 699 ~ki~dfgl~~~ 709 (833)
+.++||+.++.
T Consensus 184 ~~LIDl~r~~~ 194 (268)
T PRK15123 184 LSVIDLHRAQI 194 (268)
T ss_pred EEEEECCcccc
Confidence 88999997753
No 488
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.78 E-value=1.1e-09 Score=110.72 Aligned_cols=191 Identities=25% Similarity=0.338 Sum_probs=130.3
Q ss_pred ccCCCCCCCEEECCCCCCCCCCCcc----ccCCCCCcEEEccCCccCCCCh-------------hhhCCCCCCcEEEccC
Q 003296 238 TFTSLEKLTYLELDNNSFTGMIPQQ----LGSCRSLTLLNLAQNELNGSLP-------------IQLGSLGILQVMNLQL 300 (833)
Q Consensus 238 ~f~~l~~L~~L~L~~N~l~~~~~~~----~~~l~~L~~L~L~~N~l~~~~p-------------~~~~~l~~L~~L~L~~ 300 (833)
.+...++|++||||.|-+...-+.. +.++..|++|+|.+|.+...-- ...++-+.|+++...+
T Consensus 87 aL~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~r 166 (382)
T KOG1909|consen 87 ALLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGR 166 (382)
T ss_pred HHhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeec
Confidence 3445678888888888876443333 4567888888888887752211 1234456788888888
Q ss_pred CcCCCc----CchhhcCCCcCceeeccCCcCccc----CccccccCCCCCEEEccCCcccc----ccCccccCCCCCCEE
Q 003296 301 NKLSGE----IPSQFSQLKLLSTMNISWNSLSGS----IPSFLSNLTNLVNLNLRQNNLNG----SIPNSITNMRSLIEL 368 (833)
Q Consensus 301 N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L 368 (833)
|++... +...|...+.|+.+.++.|.|... +...|..+++|+.|||.+|-++. .+...+..+++|++|
T Consensus 167 Nrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El 246 (382)
T KOG1909|consen 167 NRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLREL 246 (382)
T ss_pred cccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheee
Confidence 887643 234566778888888888887521 23456778889999999988863 234566778888888
Q ss_pred EccCCcCCccCCCCcccccceeeccccccccchhhhh-ccCCCCCEEecccCcCccc----cchhccCCCCCCeeeCcCC
Q 003296 369 QLGGNQLSGTIPMMPPRLQIALNLSSNLFEGPIPTTF-ARLNGLEVLDLSNNRFSGE----IPQLLAQMPTLTQLLLTNN 443 (833)
Q Consensus 369 ~L~~N~l~~~~p~~~~~~~~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~ls~N 443 (833)
++++|.+...-.. .+-..| ...++|++|.+.+|.|+.. +..+....+.|..|+|++|
T Consensus 247 ~l~dcll~~~Ga~------------------a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN 308 (382)
T KOG1909|consen 247 NLGDCLLENEGAI------------------AFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGN 308 (382)
T ss_pred cccccccccccHH------------------HHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcc
Confidence 8888877522100 011122 2357899999999998743 3344567889999999999
Q ss_pred ccc
Q 003296 444 QLS 446 (833)
Q Consensus 444 ~l~ 446 (833)
.+.
T Consensus 309 ~l~ 311 (382)
T KOG1909|consen 309 RLG 311 (382)
T ss_pred ccc
Confidence 884
No 489
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.70 E-value=5.5e-08 Score=94.30 Aligned_cols=129 Identities=22% Similarity=0.206 Sum_probs=81.4
Q ss_pred EEEEEEcCCCceEEEEEccccchhh----------------------hccChhHHHHHHHHHhcCCCCC--cccceEEEe
Q 003296 570 TYYKAVMPSGMSYFIKKLNWSDKIF----------------------QLGSHHKFDKELEVLGKLSNSN--VMTPLAYVL 625 (833)
Q Consensus 570 ~vy~~~~~~~~~vavK~~~~~~~~~----------------------~~~~~~~~~~E~~~l~~l~H~n--iv~~~~~~~ 625 (833)
.||.|..++|..+|||.-+...... .........+|.+.|.++..-. +-+.+++
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~-- 78 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY-- 78 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE--
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE--
Confidence 4999999999999999764211000 0001245778999999998664 4444433
Q ss_pred cCCceEEEEeeCC--CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHh-hhcCCCCCeeecCCCccceeeCCCCCceec
Q 003296 626 ASDSAYLFYEYAP--KGTLFDVLHGCLENALDWASRYSIAVGVAQGLAF-LHGFTSNPILLLDLSTRNIFLKSLKEPQIG 702 (833)
Q Consensus 626 ~~~~~~lv~ey~~--~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~y-lH~~~~~~iiHrdlk~~Nill~~~~~~ki~ 702 (833)
+.-+|||||++ |..+.. +... .++......++.+++..+.. +| ..+|||+|+.+.||+++++ .+.++
T Consensus 79 --~~~~ivME~I~~~G~~~~~-l~~~---~~~~~~~~~~~~~il~~~~~~~~---~~givHGDLs~~NIlv~~~-~~~iI 148 (188)
T PF01163_consen 79 --NRNVIVMEYIGEDGVPLPR-LKDV---DLSPEEPKELLEEILEEIIKMLH---KAGIVHGDLSEYNILVDDG-KVYII 148 (188)
T ss_dssp --ETTEEEEE--EETTEEGGC-HHHC---GGGGSTHHHHHHHHHHHHHHHHH---CTTEEESS-STTSEEEETT-CEEE-
T ss_pred --eCCEEEEEecCCCccchhh-HHhc---cccchhHHHHHHHHHHHHHHHHH---hcCceecCCChhhEEeecc-eEEEE
Confidence 24589999998 544443 3321 11133445567777776655 46 7799999999999999877 89999
Q ss_pred cceeeeee
Q 003296 703 DIELCKVI 710 (833)
Q Consensus 703 dfgl~~~~ 710 (833)
|||-+...
T Consensus 149 Df~qav~~ 156 (188)
T PF01163_consen 149 DFGQAVDS 156 (188)
T ss_dssp -GTTEEET
T ss_pred ecCcceec
Confidence 99987654
No 490
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.70 E-value=3.9e-09 Score=114.88 Aligned_cols=183 Identities=17% Similarity=0.074 Sum_probs=136.9
Q ss_pred ccccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhcCCCCC-cccceEEEecCCceEEEEeeCC
Q 003296 560 LNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKLSNSN-VMTPLAYVLASDSAYLFYEYAP 638 (833)
Q Consensus 560 ~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n-iv~~~~~~~~~~~~~lv~ey~~ 638 (833)
.+-.++|+++++||.+-...+...++.+.. .....-++++|.+++||| .|..++-+..++..+++|+|+.
T Consensus 247 fh~fvK~altknpKkRptaeklL~h~fvs~---------~l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s 317 (829)
T KOG0576|consen 247 FHNFVKGALTKNPKKRPTAEKLLQHPFVSQ---------TLSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICS 317 (829)
T ss_pred HHHHHHHHhcCCCccCCChhhheeceeecc---------chhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhc
Confidence 355678999999999864444444666621 134556899999999999 8888888888899999999999
Q ss_pred CC-ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCCCC
Q 003296 639 KG-TLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKSTG 717 (833)
Q Consensus 639 ~g-~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~~~ 717 (833)
+| +-..-... ....+...+...+...-+++++|+| +-.=+||| ||+..+ ...|.+||+....+....
T Consensus 318 ~~rs~~~~~~~-se~~~~~~~~~~~~r~et~~l~~l~---~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~--- 385 (829)
T KOG0576|consen 318 TGRSSALEMTV-SEIALEQYQFAYPLRKETRPLAELH---SSYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM--- 385 (829)
T ss_pred CCccccccCCh-hhHhhhhhhhhhhhhhhcccccccc---cccccCcc----cccccc-cccccccccCCcccCccc---
Confidence 87 32222111 1123444555566777889999999 43358998 887754 778999999887765443
Q ss_pred ccccccccccccccccccCCcccccCcchhhHHHHHHHHhCCCccc
Q 003296 718 SLSTVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKTAVN 763 (833)
Q Consensus 718 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~elltg~~p~~ 763 (833)
...+..+|+.++|||+.....+..+.|+||.|+-..+|.-|-+|-.
T Consensus 386 ~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~ 431 (829)
T KOG0576|consen 386 KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS 431 (829)
T ss_pred ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence 2356789999999999999999999999999998888888877653
No 491
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.66 E-value=2.2e-08 Score=118.94 Aligned_cols=138 Identities=22% Similarity=0.319 Sum_probs=106.9
Q ss_pred CCCcccccCCCCCCEEECCCCCCCCcccccccCCCCCCEEeCcCCc--CCCCCCcccCCCCCCCEEEccCCcCcccCCcc
Q 003296 20 LVSLPTFNGFAGLEVLDFSSNNLNGNINLQFDELVSLKSLNLSKNK--FNGFLPINLGKTKALEELVLSGNAFHGEIPKG 97 (833)
Q Consensus 20 l~~i~~f~~l~~L~~L~Ls~N~l~~~~~~~f~~l~~L~~L~Ls~N~--l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 97 (833)
+..+|........+...+-+|.+..+... . ..+.|++|-+..|. +..+.++.|..++.|..|||++|.=-+.+|..
T Consensus 513 ~~~~~~~~~~~~~rr~s~~~~~~~~~~~~-~-~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~ 590 (889)
T KOG4658|consen 513 LSEIPQVKSWNSVRRMSLMNNKIEHIAGS-S-ENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSS 590 (889)
T ss_pred ccccccccchhheeEEEEeccchhhccCC-C-CCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChH
Confidence 33455556667788888888888754432 2 34479999999986 55555666888999999999988766788999
Q ss_pred ccCCCCCCEEeccCCcCCccCCccccCCCCCcEEECcCCcCCCCCCcccccCCccCccccccc
Q 003296 98 IADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLDGRLPTSLASITTLSRFAANQN 160 (833)
Q Consensus 98 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~n 160 (833)
++.|-+|++|+|++..++ .+|..+++|.+|.+|++..+.-...+|.....+++|+.|.+..-
T Consensus 591 I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s 652 (889)
T KOG4658|consen 591 IGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRS 652 (889)
T ss_pred HhhhhhhhcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeecc
Confidence 999999999999999988 68888999999999999887765556777777888777766543
No 492
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.64 E-value=1e-08 Score=113.27 Aligned_cols=151 Identities=19% Similarity=0.310 Sum_probs=102.9
Q ss_pred HHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccceeeeeeCCCCC------CCcc-ccccccccccccccccC
Q 003296 664 VGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIELCKVIDPSKS------TGSL-STVAGSVGYIPPEYAYT 736 (833)
Q Consensus 664 ~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~~~~------~~~~-~~~~gt~~y~aPE~~~~ 736 (833)
.+++.|+.|+|. +.++||++|.|++|.++..+..|++.|+++........ .... ....-...|.|||++..
T Consensus 106 ~~v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 455699999997 67899999999999999999999999998865543110 0000 11234567999999998
Q ss_pred CcccccCcchhhHHHHHHHH-hCCCcccCCccHHHHHHHhhcccccccccccccccCCchhHHHHHHHHHHHHHhccCCC
Q 003296 737 MRVTMAGNVYSFGVILLELL-TGKTAVNQGNELAKWVLRNSAQQDKLDHILDFNVSRTSLAVRSQMLTVLKVAVACVSVS 815 (833)
Q Consensus 737 ~~~~~~~Dv~S~Gvvl~ell-tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~d 815 (833)
...+.++|+||+||++|-+. .|+.-+...+............ +....... ...+.++.+-+.+.+..+
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~--------~~~~~~~s---~~~p~el~~~l~k~l~~~ 252 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLL--------NAGAFGYS---NNLPSELRESLKKLLNGD 252 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhccc--------cccccccc---ccCcHHHHHHHHHHhcCC
Confidence 88889999999999999998 5555555433222211111111 00000000 234456777788999999
Q ss_pred CCCCCCHHHHHH
Q 003296 816 PEARPKMKSVLR 827 (833)
Q Consensus 816 P~~Rps~~evl~ 827 (833)
+..||++.++..
T Consensus 253 ~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 253 SAVRPTLDLLLS 264 (700)
T ss_pred cccCcchhhhhc
Confidence 999998887653
No 493
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.61 E-value=5.6e-10 Score=122.11 Aligned_cols=128 Identities=32% Similarity=0.351 Sum_probs=104.1
Q ss_pred CCCCCEEECCCCCCCCcc-cccCCCCCCEEECCCCCCCCcccccccCCCCCCEEeCcCCcCCCCCCcccCCCCCCCEEEc
Q 003296 7 IDGLKLLNFSKNELVSLP-TFNGFAGLEVLDFSSNNLNGNINLQFDELVSLKSLNLSKNKFNGFLPINLGKTKALEELVL 85 (833)
Q Consensus 7 l~~L~~L~ls~N~l~~i~-~f~~l~~L~~L~Ls~N~l~~~~~~~f~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 85 (833)
+..|...++++|.|+.+. ++.-++.|+.|||++|+++... .+..|++|++|||++|.++.++--...++. |+.|.|
T Consensus 163 Wn~L~~a~fsyN~L~~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~l 239 (1096)
T KOG1859|consen 163 WNKLATASFSYNRLVLMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNL 239 (1096)
T ss_pred hhhHhhhhcchhhHHhHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhccccccchhhhh-heeeee
Confidence 356888999999999884 5788899999999999998654 788999999999999999866555555666 999999
Q ss_pred cCCcCcccCCccccCCCCCCEEeccCCcCCccCC-ccccCCCCCcEEECcCCcCC
Q 003296 86 SGNAFHGEIPKGIADYRNLTLIDLSANNLSGSVP-DRIGELSKLEVLILSANNLD 139 (833)
Q Consensus 86 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~ 139 (833)
++|.++.. ..+.+|.+|+.|||++|-|.+.-. .-++.|..|+.|+|.+|.+-
T Consensus 240 rnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 240 RNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred cccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 99998754 467889999999999998875322 22566788899999999874
No 494
>PRK09902 hypothetical protein; Provisional
Probab=98.52 E-value=8.6e-07 Score=86.25 Aligned_cols=141 Identities=15% Similarity=0.075 Sum_probs=103.5
Q ss_pred ccCcccEEEEEEcCCCceEEEEEcc-ccchhhh-ccChhHHHHHHHHHhcCCCCC--cccceEEEe-cC----CceEEEE
Q 003296 564 LKTRFSTYYKAVMPSGMSYFIKKLN-WSDKIFQ-LGSHHKFDKELEVLGKLSNSN--VMTPLAYVL-AS----DSAYLFY 634 (833)
Q Consensus 564 g~g~~g~vy~~~~~~~~~vavK~~~-~~~~~~~-~~~~~~~~~E~~~l~~l~H~n--iv~~~~~~~-~~----~~~~lv~ 634 (833)
|+||-+-||+-.. +|+.+-+|+-. .-..... .-.+..|.+|...+.++..-+ +.+.. ++. .. -.-+||+
T Consensus 27 ~rgG~SgV~r~~~-~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 27 RRNGMSGVQCVER-NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLVT 104 (216)
T ss_pred CCCCcceEEEEEe-CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEEE
Confidence 5688889999876 44479999874 1111111 346788999999999986432 44444 332 21 2368999
Q ss_pred eeCCC-CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCC--ceeccceeeee
Q 003296 635 EYAPK-GTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKE--PQIGDIELCKV 709 (833)
Q Consensus 635 ey~~~-g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~--~ki~dfgl~~~ 709 (833)
|-+++ -||.+++.+......+...+..+..++++.++-|| ..++.|+|+-+.||+++.++. ++++||.-++.
T Consensus 105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH---~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMH---SVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 97764 49999987543345677888899999999999999 889999999999999986666 88888876543
No 495
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.46 E-value=6.4e-07 Score=88.93 Aligned_cols=134 Identities=19% Similarity=0.136 Sum_probs=89.9
Q ss_pred CccccccCcccEEEEEEcCCCceEEEEEccccc---------hhh---------hccChhHHHHHHHHHhcCCCC--Ccc
Q 003296 559 PLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSD---------KIF---------QLGSHHKFDKELEVLGKLSNS--NVM 618 (833)
Q Consensus 559 ~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~---------~~~---------~~~~~~~~~~E~~~l~~l~H~--niv 618 (833)
..+.||.|.=+.||.|..++|.++|||.=+... +.. ....+....+|.++|.++.-. .|-
T Consensus 95 iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~VP 174 (304)
T COG0478 95 IGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKVP 174 (304)
T ss_pred hccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCCC
Confidence 458899999999999999999999999432100 000 011234678899999999533 454
Q ss_pred cceEEEecCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHH-HHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCC
Q 003296 619 TPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRY-SIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLK 697 (833)
Q Consensus 619 ~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~-~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~ 697 (833)
+.++ .+.-++||||.+|-.|...=- ..-.....+ .|+..+..+. ..+|||+|+.+=||+++++|
T Consensus 175 ~P~~----~nRHaVvMe~ieG~eL~~~r~----~~en~~~il~~il~~~~~~~-------~~GiVHGDlSefNIlV~~dg 239 (304)
T COG0478 175 KPIA----WNRHAVVMEYIEGVELYRLRL----DVENPDEILDKILEEVRKAY-------RRGIVHGDLSEFNILVTEDG 239 (304)
T ss_pred Cccc----cccceeeeehcccceeecccC----cccCHHHHHHHHHHHHHHHH-------HcCccccCCchheEEEecCC
Confidence 4444 356789999999866654310 011222332 2333333322 35799999999999999999
Q ss_pred Cceeccceee
Q 003296 698 EPQIGDIELC 707 (833)
Q Consensus 698 ~~ki~dfgl~ 707 (833)
.+.++||--+
T Consensus 240 ~~~vIDwPQ~ 249 (304)
T COG0478 240 DIVVIDWPQA 249 (304)
T ss_pred CEEEEeCccc
Confidence 9999998544
No 496
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.38 E-value=5.3e-08 Score=96.29 Aligned_cols=188 Identities=25% Similarity=0.292 Sum_probs=91.2
Q ss_pred CCCCCEEEccCCcCcc--cCCccccCCCCCCEEeccCCcCCccCCccccCCCCCcEEECcCCcCCCCC-CcccccCCccC
Q 003296 77 TKALEELVLSGNAFHG--EIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLDGRL-PTSLASITTLS 153 (833)
Q Consensus 77 l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~ 153 (833)
.+.+++|||.+|.|+. .+-.-+.+|+.|++|+|+.|.+...+...-..+.+|++|-|.+..+.-.. ...+..++.++
T Consensus 70 ~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vt 149 (418)
T KOG2982|consen 70 VTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVT 149 (418)
T ss_pred hhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhh
Confidence 3445555555555542 12222445556666666666555332221133455666666555443222 12334455555
Q ss_pred ccccccccccccCChhhhhcCCEEecccccccccCCc--cCCCCCCCCEEecccccCcccCCCCCCcCCcEEEcCCcccc
Q 003296 154 RFAANQNKFSGSVPGGITRFLRNLDLSYNKLLGVIPI--DLLSHPNLQTIDLSVNMLEGSLPQNMSPNLVRLRLGTNLLI 231 (833)
Q Consensus 154 ~l~l~~n~l~~~~p~~~~~~L~~L~Ls~N~l~~~~~~--~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~l~~n~l~ 231 (833)
.|.++.|. ++.+++..|.+....|. ++...+.+..++++-|++... .|++..+.+..|.+.
T Consensus 150 elHmS~N~------------~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~-----Fpnv~sv~v~e~PlK 212 (418)
T KOG2982|consen 150 ELHMSDNS------------LRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRI-----FPNVNSVFVCEGPLK 212 (418)
T ss_pred hhhhccch------------hhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhh-----cccchheeeecCccc
Confidence 55555543 23344444443321110 111123333334444444322 234555555555444
Q ss_pred CCCCccccCCCCCCCEEECCCCCCCCC-CCccccCCCCCcEEEccCCccCC
Q 003296 232 GEIPSATFTSLEKLTYLELDNNSFTGM-IPQQLGSCRSLTLLNLAQNELNG 281 (833)
Q Consensus 232 ~~~~~~~f~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~ 281 (833)
..-....+..++.+..|+|+.|+|..- .-+++.++++|..|.+++|.+..
T Consensus 213 ~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d 263 (418)
T KOG2982|consen 213 TESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSD 263 (418)
T ss_pred chhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccc
Confidence 333334455566667777877777532 12356677777777777777653
No 497
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.35 E-value=2.4e-06 Score=85.29 Aligned_cols=128 Identities=24% Similarity=0.273 Sum_probs=92.5
Q ss_pred CCceEEEEEcccc---chhhhccChhHHHHHHHHHhcCCCC--CcccceEEEecCC----ceEEEEeeCCCC-Chhhhhh
Q 003296 578 SGMSYFIKKLNWS---DKIFQLGSHHKFDKELEVLGKLSNS--NVMTPLAYVLASD----SAYLFYEYAPKG-TLFDVLH 647 (833)
Q Consensus 578 ~~~~vavK~~~~~---~~~~~~~~~~~~~~E~~~l~~l~H~--niv~~~~~~~~~~----~~~lv~ey~~~g-~L~~~l~ 647 (833)
.++.+.+|..... ......-....+.+|...+.++..- .+.+.+++.+... ..++|+|++++- +|.+++.
T Consensus 31 ~~~~y~~k~~~~~~~~~~~~~~~~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~ 110 (206)
T PF06293_consen 31 VGRRYYRKRLWNKLRRDRLRFPLRRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQ 110 (206)
T ss_pred cceEEEECCeechhccchhhhcccchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHH
Confidence 4566666654211 1011112345788999988888543 3455666666532 358999999984 8999987
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCC---Cceeccceeeeee
Q 003296 648 GCLENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLK---EPQIGDIELCKVI 710 (833)
Q Consensus 648 ~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~---~~ki~dfgl~~~~ 710 (833)
... ..+...+..++.++++.++-|| ..+|+|+|+++.|||++.+. .+.++||+-++..
T Consensus 111 ~~~--~~~~~~~~~ll~~l~~~i~~lH---~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 111 QWE--QLDPSQRRELLRALARLIAKLH---DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred hhc--ccchhhHHHHHHHHHHHHHHHH---HCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 522 2566677889999999999999 88999999999999999876 7889999877654
No 498
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.34 E-value=5e-06 Score=86.70 Aligned_cols=254 Identities=13% Similarity=0.101 Sum_probs=145.8
Q ss_pred CccccccCcccEEEEEEcCCCceEEEEEccccchhhhccChhHHHHHHHHHhcC-CCCCcccceEEEe------cCCc-e
Q 003296 559 PLNVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIFQLGSHHKFDKELEVLGKL-SNSNVMTPLAYVL------ASDS-A 630 (833)
Q Consensus 559 ~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~------~~~~-~ 630 (833)
...-+|+|+-+.+|-.-- -...+.|+...... ..-.+-++.|.+. .||-+-.=+.|=. +++. .
T Consensus 15 ~gr~LgqGgea~ly~l~e--~~d~VAKIYh~Ppp-------a~~aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~i 85 (637)
T COG4248 15 PGRPLGQGGEADLYTLGE--VRDQVAKIYHAPPP-------AAQAQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVI 85 (637)
T ss_pred CCccccCCccceeeecch--hhchhheeecCCCc-------hHHHHHHHHhccCCCCcchhhhhcccHHHhhCCCcccee
Confidence 346789999999996432 11223454421111 1112233344444 4664432122211 1222 4
Q ss_pred EEEEeeCCCC-ChhhhhhcC----CCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCeeecCCCccceeeCCCCCceeccce
Q 003296 631 YLFYEYAPKG-TLFDVLHGC----LENALDWASRYSIAVGVAQGLAFLHGFTSNPILLLDLSTRNIFLKSLKEPQIGDIE 705 (833)
Q Consensus 631 ~lv~ey~~~g-~L~~~l~~~----~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~Nill~~~~~~ki~dfg 705 (833)
-+.|..+++. -..+++... .-...+|.-.++.++.+|.+.+-|| ..+-+-+|+.++|+|+.+++.+.+.|-.
T Consensus 86 GflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH---~~Gh~vGDVn~~~~lVsd~~~V~LVdsD 162 (637)
T COG4248 86 GFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLH---EHGHVVGDVNQNSFLVSDDSKVVLVDSD 162 (637)
T ss_pred EEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHH---hcCCcccccCccceeeecCceEEEEccc
Confidence 5666666653 222232211 1125789999999999999999999 6677789999999999999999888743
Q ss_pred eeeeeCCCCCCCcccccccccccccccccc-----CCcccccCcchhhHHHHHHHHhC-CCcccCC-------ccHHHHH
Q 003296 706 LCKVIDPSKSTGSLSTVAGSVGYIPPEYAY-----TMRVTMAGNVYSFGVILLELLTG-KTAVNQG-------NELAKWV 772 (833)
Q Consensus 706 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~S~Gvvl~elltg-~~p~~~~-------~~~~~~~ 772 (833)
--..-..+. .....+|...|.+||.-. +..-+...|-|.+||++++++.| +.||.+- +....-+
T Consensus 163 sfqi~~ng~---~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~I 239 (637)
T COG4248 163 SFQINANGT---LHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDI 239 (637)
T ss_pred ceeeccCCc---eEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhh
Confidence 222211111 123467899999999654 33456789999999999999887 9999731 1111111
Q ss_pred HHhhcccccccccccc--ccc--CCchhHHHHHHHHHHHHHhccCCC--CCCCCCHHHHHHHHHhc
Q 003296 773 LRNSAQQDKLDHILDF--NVS--RTSLAVRSQMLTVLKVAVACVSVS--PEARPKMKSVLRMLLNA 832 (833)
Q Consensus 773 ~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~l~~~cl~~d--P~~Rps~~evl~~L~~~ 832 (833)
... .....-+. ... +....+.-....+..+..+|+... |.-|||++.-+..|.++
T Consensus 240 a~g-----~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al 300 (637)
T COG4248 240 AHG-----RFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDAL 300 (637)
T ss_pred hcc-----eeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHH
Confidence 000 00000000 000 011112223445666777887654 56899999888877654
No 499
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.31 E-value=1.8e-06 Score=96.38 Aligned_cols=146 Identities=15% Similarity=0.143 Sum_probs=97.1
Q ss_pred cccccCcccEEEEEEcCCCceEEEEEccccchhh------------------hc------------------cChhHHHH
Q 003296 561 NVELKTRFSTYYKAVMPSGMSYFIKKLNWSDKIF------------------QL------------------GSHHKFDK 604 (833)
Q Consensus 561 ~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~------------------~~------------------~~~~~~~~ 604 (833)
+-++.++-|.||+|++++|+.||||+..+.-+.. .. ..+-+|.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 5789999999999999999999999885321100 00 00123667
Q ss_pred HHHHHhcCC-----CCCcccceEEEecCCceEEEEeeCCCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCC
Q 003296 605 ELEVLGKLS-----NSNVMTPLAYVLASDSAYLFYEYAPKGTLFDVLHGCLENALDWASRYSIAVGVAQGLAFLHGFTSN 679 (833)
Q Consensus 605 E~~~l~~l~-----H~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ylH~~~~~ 679 (833)
|..-+.+++ .|+|.-..=|+.-.....|+|||++|-.+.+...-. ....+- ..++..++++. +-+.-..
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~-~~g~d~---k~ia~~~~~~f--~~q~~~d 284 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALK-SAGIDR---KELAELLVRAF--LRQLLRD 284 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHH-hcCCCH---HHHHHHHHHHH--HHHHHhc
Confidence 777776663 455544444444457789999999998888874321 123442 22333333221 1111134
Q ss_pred CeeecCCCccceeeCCCCCceeccceeeeeeCC
Q 003296 680 PILLLDLSTRNIFLKSLKEPQIGDIELCKVIDP 712 (833)
Q Consensus 680 ~iiHrdlk~~Nill~~~~~~ki~dfgl~~~~~~ 712 (833)
+++|.|..|.||+++.++..-..|||+.....+
T Consensus 285 gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 285 GFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred CccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 799999999999999999999999999887654
No 500
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.30 E-value=1.7e-08 Score=110.88 Aligned_cols=57 Identities=26% Similarity=0.245 Sum_probs=24.6
Q ss_pred CCEEEccCCcCcccCCccccCCCCCCEEeccCCcCCccCCccccCCCCCcEEECcCCcCC
Q 003296 80 LEELVLSGNAFHGEIPKGIADYRNLTLIDLSANNLSGSVPDRIGELSKLEVLILSANNLD 139 (833)
Q Consensus 80 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 139 (833)
|.+.+.++|.++ ....++.-++.|++|||++|+++... .+..+++|++|||++|.++
T Consensus 166 L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~ 222 (1096)
T KOG1859|consen 166 LATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLR 222 (1096)
T ss_pred HhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhc
Confidence 334444444443 33333444444444444444444221 3444444444444444444
Done!