BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003302
(832 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255543715|ref|XP_002512920.1| ribosomal RNA methyltransferase, putative [Ricinus communis]
gi|223547931|gb|EEF49423.1| ribosomal RNA methyltransferase, putative [Ricinus communis]
Length = 828
Score = 1204 bits (3116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/825 (73%), Positives = 692/825 (83%), Gaps = 11/825 (1%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGKVKGKHRLDK+YRLAKEHGYRSRASWKLVQLDSKF FL SS AVLDLCAAPGGWMQVA
Sbjct: 1 MGKVKGKHRLDKFYRLAKEHGYRSRASWKLVQLDSKFQFLHSSRAVLDLCAAPGGWMQVA 60
Query: 61 VQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
VQRVPVGSLVLG+DLV IAPIRGA S+EQDITKPEC+ARVKK+M EHGV+AFDLVLHDGS
Sbjct: 61 VQRVPVGSLVLGIDLVKIAPIRGATSIEQDITKPECKARVKKIMGEHGVKAFDLVLHDGS 120
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
PN+GGAWAQEAMSQNALVID+V+LATQFLAPKGTFVTKVFRSQDY+SV+YCL QLFEKVE
Sbjct: 121 PNIGGAWAQEAMSQNALVIDAVRLATQFLAPKGTFVTKVFRSQDYNSVIYCLNQLFEKVE 180
Query: 181 VDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEP-RKVVDVLRGTKQKRH 239
VDKPAASRSASAEI++LG+KYKAPAKIDPRLLDVK+LFQGSVEP RKV+DVLRG+KQKRH
Sbjct: 181 VDKPAASRSASAEIFVLGLKYKAPAKIDPRLLDVKHLFQGSVEPQRKVIDVLRGSKQKRH 240
Query: 240 RDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALC 299
RDGYEDG++ +RKVS A DF+WS+ PLEILGSVTSI F DPA ++DH LTTEEVKALC
Sbjct: 241 RDGYEDGESIIRKVSSAADFVWSDTPLEILGSVTSIAFEDPASLPLRDHALTTEEVKALC 300
Query: 300 DDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEEL 359
DDLRVLGKQDFKHLLKWRM I+KA S ++KAT ++ S E +N ED D+++LNEMEEL
Sbjct: 301 DDLRVLGKQDFKHLLKWRMHIRKALSPSQKAT--STTSTDGEEKNVEDEDDKLLNEMEEL 358
Query: 360 KYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSIKGKKDLAAVE 419
YA++++KK+ KK AK+RAKDKARK G+QID ++D Y DHELFSLSSIKGKKDL AV
Sbjct: 359 TYAVERKKKQAKKRDAKRRAKDKARKTKGVQIDALEDGYVDHELFSLSSIKGKKDLVAVN 418
Query: 420 YDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENYVAKRGG 479
++D N DSE+E P+ EH SSD+DSDEERR+YD LEE LDQ YE +V KR G
Sbjct: 419 SAENDENGELGDSENEEPHDQADEHTSSDLDSDEERRRYDAHLEEFLDQVYERFVTKREG 478
Query: 480 STMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDANPLMVPLDDGIRPTQEE 539
ST QRKRAKKAY+ +L EGD+++D M + YDSDKDQGD + NPLMVP +DG PTQEE
Sbjct: 479 STKQRKRAKKAYS---ELMEGDDNDDAMQSDYDSDKDQGDEEVNPLMVPFNDGEVPTQEE 535
Query: 540 ITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKMANDAAGPKSTHN 599
ITNKWF+Q++FA+AV++GDL K SED+ QVD Q K + P + A DA G K T +
Sbjct: 536 ITNKWFTQDVFAKAVEDGDLEKYDSEDQMQVDMQEGKVASP----KNKAKDAIGHKHTQH 591
Query: 600 QVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQREQILDDAY 659
Q S+ E DFEIVPAP A S D SS + DE+V+ KAEILA AKKMLRKKQRE++LDDAY
Sbjct: 592 QTSKGEEDFEIVPAP-AMDSSDDSSSDDSDEDVEAKAEILAYAKKMLRKKQREEMLDDAY 650
Query: 660 NRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKR 719
N+YMFDD+GLP WF+EEERRHRQ I+PVTKEEI AM+AQFKEI+ARPAKKVAEAKARKKR
Sbjct: 651 NKYMFDDEGLPGWFVEEERRHRQPIKPVTKEEIVAMRAQFKEINARPAKKVAEAKARKKR 710
Query: 720 VAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKEYVVAKKGVQVRAGK 779
+AM++LEKVRKKAN ISDQA+ISDRSKRK IEQLYK A PKRPKKEYVVAKKGV +AGK
Sbjct: 711 IAMKRLEKVRKKANTISDQAEISDRSKRKMIEQLYKKAQPKRPKKEYVVAKKGVANKAGK 770
Query: 780 GKVLVDPRMKKDSRTHGSGKARKGGSKKGNIGKARKGKGSVKASS 824
GKVLVD RMKKD+R HG K KG SK G K +K KG S+
Sbjct: 771 GKVLVDRRMKKDARVHGMSKRGKGNSKGGKNAKGQKSKGPRNVSA 815
>gi|225428430|ref|XP_002280414.1| PREDICTED: adoMet-dependent rRNA methyltransferase spb1 [Vitis
vinifera]
Length = 842
Score = 1151 bits (2977), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 606/841 (72%), Positives = 699/841 (83%), Gaps = 16/841 (1%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGKVKGKHRLDK+Y LAKEHGYRSRA+WKLVQLDSK++FLRSS AVLDLCAAPGGWMQ A
Sbjct: 1 MGKVKGKHRLDKFYHLAKEHGYRSRAAWKLVQLDSKYNFLRSSRAVLDLCAAPGGWMQAA 60
Query: 61 VQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
V+RVPVGS +LG+DL PIAP+RGA+S+E+DITKP C+ARVKK+M E+G AFD+VLHDGS
Sbjct: 61 VERVPVGSFILGVDLNPIAPVRGAISIEEDITKPACKARVKKLMSEYGCAAFDIVLHDGS 120
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
PN+GGAW QEA +QNALVID+++LATQFLAPKG FVTKVFRSQDY+SVLYCLKQLFEKVE
Sbjct: 121 PNIGGAWTQEATAQNALVIDALRLATQFLAPKGAFVTKVFRSQDYNSVLYCLKQLFEKVE 180
Query: 181 VDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRHR 240
VDKPAASRS SAEI++LG+KYKAPAKIDPRLLDVK+LFQG++EPRKVVDVLRGTKQKRHR
Sbjct: 181 VDKPAASRSTSAEIFVLGLKYKAPAKIDPRLLDVKHLFQGTIEPRKVVDVLRGTKQKRHR 240
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
DGYEDGDTTLRKVS AT+FIWS+ PLEILGSVTSI+F DPA IKDH LTTEEVK LCD
Sbjct: 241 DGYEDGDTTLRKVSSATNFIWSDTPLEILGSVTSISFDDPASLPIKDHALTTEEVKTLCD 300
Query: 301 DLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEELK 360
DLRVLGKQDFKHLLKWRM ++KA S +KAT S +A + E D D R+LNEMEEL
Sbjct: 301 DLRVLGKQDFKHLLKWRMHVRKALSPVQKAT---STAAEDDHEKVVDEDERMLNEMEELT 357
Query: 361 YAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSIKGKKDLAAV-- 418
YAM+++KKR KKLLAK++AKDKARK TGMQ+D +++ YTDHELFSLSSIK KKDL AV
Sbjct: 358 YAMERKKKRTKKLLAKRQAKDKARKVTGMQVDALEEGYTDHELFSLSSIKAKKDLLAVNS 417
Query: 419 -EYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENYVAKR 477
EYD+ D DSEDER +TQEH +SD+DSDEERR+YDEQ+EE+LDQ YE +VA+R
Sbjct: 418 TEYDEGD---GVVDSEDERTREETQEHSASDMDSDEERRRYDEQMEEMLDQVYEQFVARR 474
Query: 478 GGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDANPLMVPLDDGIRPTQ 537
GST QRKRA+K ++++D L +GD+D D+D +Q DL+ANPLMVPL PTQ
Sbjct: 475 EGSTKQRKRARKKHSEDDLLEDGDDDIIHSDHDSDND-NQADLEANPLMVPLHGEEMPTQ 533
Query: 538 EEITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKMANDAAGPKST 597
EIT+KWFSQ+IFAEA + GDLGK SEDE +VD+Q + SIP+KAK+ A +
Sbjct: 534 REITDKWFSQDIFAEAAEEGDLGKHESEDEMEVDRQEKTLSIPKKAKENKARKPSEINPP 593
Query: 598 HNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQREQILDD 657
+ S+ E DFEIVPAP DSSDDSSSDES+DE++ KAEILACAKKMLRKK+RE+ILDD
Sbjct: 594 QIEASKAEEDFEIVPAPSTDSSDDSSSDESDDEDIHAKAEILACAKKMLRKKERERILDD 653
Query: 658 AYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARK 717
AYN+YMF D GLP WF +EE RH Q I+PVTKEEIAAM+AQFKEIDARPAKKVAEAKARK
Sbjct: 654 AYNKYMFHDKGLPQWFADEEARHCQTIKPVTKEEIAAMRAQFKEIDARPAKKVAEAKARK 713
Query: 718 KRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKEYVVAKKGVQVRA 777
KR AMRKLEKVRKKAN ISDQ DISDRSK + IEQLYK A PKRP+KEYVVAKKGVQVRA
Sbjct: 714 KRAAMRKLEKVRKKANTISDQTDISDRSKGRLIEQLYKKAAPKRPQKEYVVAKKGVQVRA 773
Query: 778 GKGKVLVDPRMKKDSRT-----HGSGKARKGGSKKGNIGKARKG-KGSVKASSKKGKKGN 831
GKGKVLVD RMKKD+R+ G G ++KGG +KG +KG KGS KAS+K GK G
Sbjct: 774 GKGKVLVDRRMKKDARSRGMSKQGKGPSKKGGFRKGKNANGQKGNKGSAKASAKSGKGGR 833
Query: 832 K 832
K
Sbjct: 834 K 834
>gi|449462216|ref|XP_004148837.1| PREDICTED: adoMet-dependent rRNA methyltransferase spb1-like
[Cucumis sativus]
Length = 854
Score = 1122 bits (2903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 599/860 (69%), Positives = 711/860 (82%), Gaps = 34/860 (3%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGKVKGKHRLDKYYRLAKEHGYRSRASWKL QLDSK++FLRSSHAVLDLCAAPGGWMQVA
Sbjct: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLAQLDSKYNFLRSSHAVLDLCAAPGGWMQVA 60
Query: 61 VQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
V+RVPVGSLV+G+DLVPIAP+RGAV+ EQDITKPEC+AR+KK+M E G AFDL+LHDGS
Sbjct: 61 VERVPVGSLVVGVDLVPIAPVRGAVAFEQDITKPECKARLKKIMSEKGCAAFDLILHDGS 120
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
PNVGGAWAQEAM+QN+LVIDSV+LATQ LAPKGTFVTKVFRSQDYSSVLYC+KQLFEKVE
Sbjct: 121 PNVGGAWAQEAMAQNSLVIDSVRLATQLLAPKGTFVTKVFRSQDYSSVLYCMKQLFEKVE 180
Query: 181 VDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEP-RKVVDVLRGTKQKRH 239
VDKPAASRSASAEIY+LGI+YKAPAKIDPRLLDVKYLFQGS+EP +KVVDVLRGTKQKRH
Sbjct: 181 VDKPAASRSASAEIYVLGIRYKAPAKIDPRLLDVKYLFQGSIEPQQKVVDVLRGTKQKRH 240
Query: 240 RDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALC 299
RDGYEDG TTLRKVS A++FIWS++PLE+LG+VT I F DP IKDH+LTTEEVKALC
Sbjct: 241 RDGYEDGATTLRKVSSASNFIWSDSPLEVLGTVTCIAFDDPDSLPIKDHDLTTEEVKALC 300
Query: 300 DDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEEL 359
DDLRVLGKQDFKHLLKWR+ I+KA S +K T +++ E E ++D D+++LNEMEEL
Sbjct: 301 DDLRVLGKQDFKHLLKWRLHIRKALSPDQKPT--STSVKDAENEVKQDEDDKLLNEMEEL 358
Query: 360 KYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSIKGKKDLAAV- 418
YAM+++KKR KKLLAK++AKDKARKA G Q+DVM++ Y DHELFSLS+IKGK DL AV
Sbjct: 359 AYAMERKKKRAKKLLAKRKAKDKARKAMGTQLDVMEEGYVDHELFSLSNIKGKNDLRAVD 418
Query: 419 --EYDDDDVNAAAEDSEDER-PNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENYVA 475
EYDDD+V +++ + NR + +SDIDSDEERR+YDE +EE+LDQAYE++V+
Sbjct: 419 STEYDDDNVELGEHENDVTKDKNRGSS---ASDIDSDEERRRYDEHMEELLDQAYESFVS 475
Query: 476 KRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDANPLMVPLDDGIRP 535
++ GS +RKR K AY+ +L E + D + + YDSD++ D D NPLMV LDDG P
Sbjct: 476 RKEGSAKRRKRVKNAYSDNAELLEDENGGDGIQSDYDSDENIVDADKNPLMVSLDDGAEP 535
Query: 536 TQEEITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKMANDAAGPK 595
TQEEI +KWFSQ+IFAEA + GDL +L S+D+ +VD E ++ +KAK ++ + AG K
Sbjct: 536 TQEEIASKWFSQDIFAEAAEEGDLKRLDSDDDMEVDGPKETLAVSKKAKSNISQN-AGEK 594
Query: 596 S----THNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQR 651
S + ++V+ FE+VPAP DSSD SSS+ES+DE+ DT+AEILACAKKMLRKKQR
Sbjct: 595 SKISTNARESNKVDDGFEVVPAPATDSSDSSSSEESDDEDPDTRAEILACAKKMLRKKQR 654
Query: 652 EQILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVA 711
EQILDD+YN+YMFDD GLP WFL+EE+RHRQ I+P+TKEE+AA++AQFKEIDARPAKKVA
Sbjct: 655 EQILDDSYNKYMFDDSGLPKWFLDEEQRHRQPIKPITKEEVAAIRAQFKEIDARPAKKVA 714
Query: 712 EAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKEYVVAKK 771
EAKARKKR+AM+KLEKVRKKANVISDQADISDRSKRK I+QLYK AVP++PKKE VVAKK
Sbjct: 715 EAKARKKRIAMKKLEKVRKKANVISDQADISDRSKRKMIDQLYKKAVPQKPKKELVVAKK 774
Query: 772 GVQVRAGKGKVLVDPRMKKDSRTHG---------------SGKARKGGSKKGNI--GKA- 813
GVQVR GKGKVLVD RMKKD+R HG + +A+ G +K N GKA
Sbjct: 775 GVQVRVGKGKVLVDRRMKKDARKHGMNKQGKGSKKGKNSKAPRAKGGPAKDSNTPGGKAG 834
Query: 814 RKGK-GSVKASSKKGKKGNK 832
R GK G KAS KKG++GNK
Sbjct: 835 RAGKAGFTKASGKKGRRGNK 854
>gi|356538763|ref|XP_003537870.1| PREDICTED: adoMet-dependent rRNA methyltransferase spb1-like
[Glycine max]
Length = 829
Score = 1121 bits (2899), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/838 (71%), Positives = 696/838 (83%), Gaps = 15/838 (1%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK KGKHRLDKYY LAKEHGYRSRASWKLVQL++KF FL S+ AVLDLCAAPGGWMQVA
Sbjct: 1 MGKAKGKHRLDKYYHLAKEHGYRSRASWKLVQLNNKFHFLESARAVLDLCAAPGGWMQVA 60
Query: 61 VQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
V+ +PV LV+G+DL PIAP+RGA+++++DIT+PEC++R+KK+M +HG RAFD++LHDGS
Sbjct: 61 VKSMPVNHLVIGVDLSPIAPVRGAIAIQEDITRPECKSRIKKLMNDHGCRAFDVILHDGS 120
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
PNVGGAWAQEA SQNALVID+VKLATQFLAPKG FVTK+FRSQDYSSV+YCLKQLFEKVE
Sbjct: 121 PNVGGAWAQEATSQNALVIDAVKLATQFLAPKGIFVTKIFRSQDYSSVVYCLKQLFEKVE 180
Query: 181 VDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPR-KVVDVLRGTKQKRH 239
VDKPAASRS SAEIY+LG+KYKAPAKIDPRLLDVK+LFQGSVEP+ KVVDVLR +KQKRH
Sbjct: 181 VDKPAASRSESAEIYVLGLKYKAPAKIDPRLLDVKHLFQGSVEPQPKVVDVLRDSKQKRH 240
Query: 240 RDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALC 299
RDGYEDGDTTLRK+S A +FIWSN+PLEILGSVTSITF DPA S IKDH+LTTEEVK+LC
Sbjct: 241 RDGYEDGDTTLRKLSSAANFIWSNSPLEILGSVTSITFTDPADSPIKDHDLTTEEVKSLC 300
Query: 300 DDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEG-ENEEDADNRVLNEMEE 358
DDLRVLGKQDFKHLLKWR+QI+KA S +K P S + G E + D ++R+LNEMEE
Sbjct: 301 DDLRVLGKQDFKHLLKWRIQIRKALSPTQK---PDSTTTEQMGNEPKVDEEDRILNEMEE 357
Query: 359 LKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSIKGKKDLAAV 418
L Y MD++KKR KKLLAK+RAKDKARKATGMQ+D + D Y D ELF+LSSIKGKKDL AV
Sbjct: 358 LTYVMDRKKKRAKKLLAKRRAKDKARKATGMQMDAIDDGYVDQELFALSSIKGKKDLVAV 417
Query: 419 ---EYDDDDVNAAAEDSEDERPNRDTQEHVSSDI-DSDEERRKYDEQLEEVLDQAYENYV 474
EY+ D+ EDSE+E ++ EH S D+ DSDEER++Y+EQ+E+++D+AYE +V
Sbjct: 418 DNTEYEGDE--GELEDSENEE-THESPEHSSGDLEDSDEERKRYNEQMEDLMDKAYERFV 474
Query: 475 AKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDANPLMVPLDDGIR 534
++ GS QRKR KK+Y +DQL EG ED+D + + YDSD+DQGD +ANPLMVPL+DG
Sbjct: 475 IRKEGSAKQRKRIKKSYDAKDQLLEGGEDDDIVQSKYDSDEDQGDQEANPLMVPLNDGAE 534
Query: 535 PTQEEITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKMANDAAGP 594
TQEE+ NKWFSQ++FAEA + GD K S+DE +D+ EK SI +K K+ A
Sbjct: 535 LTQEEVMNKWFSQDVFAEAAEEGDFEKDESKDEMDIDEPKEKISIAKKVKENKTAAPAVV 594
Query: 595 KSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQREQI 654
Q S+ DFEIVPAP S D SS + +E+ + KAEILA AKKM+RKKQREQ+
Sbjct: 595 AHPQPQPSKAADDFEIVPAPDT-DSSDDSSSDEWEEDTEAKAEILAYAKKMMRKKQREQM 653
Query: 655 LDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAK 714
LDDAYN+YMFDD+GLP WFL+EERRHRQ I+P+TKEEIAAMKAQFKEIDARPAKKVAEAK
Sbjct: 654 LDDAYNKYMFDDEGLPKWFLDEERRHRQPIKPITKEEIAAMKAQFKEIDARPAKKVAEAK 713
Query: 715 ARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKEYVVAKKGVQ 774
ARKKRVAMRKLEKVRKKAN ISDQ +ISD SKRKQIEQLYK AVPKRPKKEYVVAKKGVQ
Sbjct: 714 ARKKRVAMRKLEKVRKKANAISDQTEISDSSKRKQIEQLYKRAVPKRPKKEYVVAKKGVQ 773
Query: 775 VRAGKGKVLVDPRMKKDSRTHGSGKARKGGSKKGNIGKARKGKGSVKASSKKGKKGNK 832
VRAGKGKVLVD RMKKD+R HG GKA KGGSK KA KGKGS KAS+KKGK+ K
Sbjct: 774 VRAGKGKVLVDRRMKKDARKHGMGKAGKGGSKTKG--KAPKGKGSSKASAKKGKQRTK 829
>gi|356544480|ref|XP_003540678.1| PREDICTED: adoMet-dependent rRNA methyltransferase spb1-like
[Glycine max]
Length = 834
Score = 1112 bits (2877), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 580/805 (72%), Positives = 672/805 (83%), Gaps = 23/805 (2%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK KGKHRLDKYY LAKEHGYRSRASWKLVQL+SKF FL S+ AVLDLCAAPGGWMQV
Sbjct: 1 MGKAKGKHRLDKYYHLAKEHGYRSRASWKLVQLNSKFGFLESARAVLDLCAAPGGWMQVV 60
Query: 61 VQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
VQRVPV LV+G+DL PIAP+RGA+++++DIT+PEC++R+KK+M +HG RAFD++LHDGS
Sbjct: 61 VQRVPVDHLVIGVDLAPIAPVRGAIAIQEDITRPECKSRIKKLMNDHGCRAFDVILHDGS 120
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
PNVGGAWAQEAMSQNALVID+VKLATQFLAPKG FVTK+FRSQDYSSV+YCLKQLFEKVE
Sbjct: 121 PNVGGAWAQEAMSQNALVIDAVKLATQFLAPKGKFVTKIFRSQDYSSVVYCLKQLFEKVE 180
Query: 181 VDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPR-KVVDVLRGTKQKRH 239
VDKPAASRS SAEIY+LG+ YKAPAKIDPRLLDVK+LFQGSVEP+ KVVDVLR TKQKRH
Sbjct: 181 VDKPAASRSESAEIYVLGLGYKAPAKIDPRLLDVKHLFQGSVEPQPKVVDVLRDTKQKRH 240
Query: 240 RDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALC 299
RDGYEDG+TTLRKVS A +FIWSN+PLEILGSVTSITF DPA S IKDH+LT+EEVK+LC
Sbjct: 241 RDGYEDGNTTLRKVSSAANFIWSNSPLEILGSVTSITFTDPADSLIKDHDLTSEEVKSLC 300
Query: 300 DDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEE----DADNRVLNE 355
DDLRVLGKQDFKHLLKWR+Q++KA S +K S TE + E D ++R+LNE
Sbjct: 301 DDLRVLGKQDFKHLLKWRIQVRKALSPTQKPD-----STTTELMDNEPKVVDEEDRILNE 355
Query: 356 MEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSIKGKKDL 415
MEEL Y MD++KKR KKLLAK+RAKDKARKATGMQ+D + D Y D ELF+LSSIKGKKDL
Sbjct: 356 MEELTYVMDRKKKRAKKLLAKRRAKDKARKATGMQMDAIDDGYVDQELFALSSIKGKKDL 415
Query: 416 AAV---EYDDDDVNAAAEDSEDERPNRDTQEHVSSDI-DSDEERRKYDEQLEEVLDQAYE 471
AV EY+ D+ EDSE+E + EH SSD+ DSDEER++Y+EQ+E+++DQAYE
Sbjct: 416 VAVDNTEYEGDE--GEVEDSENEETHEGRPEHSSSDLEDSDEERKRYNEQMEDLMDQAYE 473
Query: 472 NYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDANPLMVPLDD 531
+V ++ GS QRKR KK+Y + QL EG ED+D + + YDSD+DQGD +ANPLMVPL+D
Sbjct: 474 RFVIRKEGSAKQRKRIKKSYDAKAQLLEGGEDDDIVQSKYDSDEDQGDQEANPLMVPLND 533
Query: 532 GIRPTQEEITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKMANDA 591
TQEEI NKWFSQ++FAEA + GD K S+DE +D+ EK SI +K K+ N
Sbjct: 534 EAELTQEEIMNKWFSQDVFAEAAEEGDFKKDESKDEMDIDEPKEKISIAKKVKE---NKT 590
Query: 592 AGPK-STH--NQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRK 648
A P +TH Q S+ DFEIVPAP S D SS + +E+++ KAEILA AKKM+RK
Sbjct: 591 AAPAVATHPQPQPSKAGDDFEIVPAPDT-DSSDDSSSDEWEEDIEAKAEILAYAKKMMRK 649
Query: 649 KQREQILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAK 708
KQRE +LDDAYN+YMFDD+GLP WFL+EERRHRQ I+P+TKEEIAAMKAQFKEIDARPAK
Sbjct: 650 KQREHLLDDAYNKYMFDDEGLPKWFLDEERRHRQPIKPITKEEIAAMKAQFKEIDARPAK 709
Query: 709 KVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKEYVV 768
KVAEAKARKKRVAMRKLEKVRKKAN ISDQ +ISDRSKRKQIEQLYK AVPKRPKKEYVV
Sbjct: 710 KVAEAKARKKRVAMRKLEKVRKKANAISDQTEISDRSKRKQIEQLYKRAVPKRPKKEYVV 769
Query: 769 AKKGVQVRAGKGKVLVDPRMKKDSR 793
AKKGVQVRAGKGKVLVD RMKKD+R
Sbjct: 770 AKKGVQVRAGKGKVLVDRRMKKDAR 794
>gi|224103395|ref|XP_002313039.1| predicted protein [Populus trichocarpa]
gi|222849447|gb|EEE86994.1| predicted protein [Populus trichocarpa]
Length = 840
Score = 1093 bits (2827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 592/804 (73%), Positives = 679/804 (84%), Gaps = 19/804 (2%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGKVKGKHRLDK+Y+LAKEHGYRSRASWKL+QLD+KF FL+SS AVLDLCAAPGGWMQVA
Sbjct: 1 MGKVKGKHRLDKFYKLAKEHGYRSRASWKLIQLDTKFKFLQSSRAVLDLCAAPGGWMQVA 60
Query: 61 VQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
VQRVPV SLVLG+DLV IAP+RGAVS+EQDITKPECRA++KK+M EHGVRAFDLVLHDGS
Sbjct: 61 VQRVPVRSLVLGIDLVKIAPLRGAVSIEQDITKPECRAKIKKIMGEHGVRAFDLVLHDGS 120
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
PN+GGAW+QEAM+QN+LVIDSV+LATQFLAPKGTFVTKVFRSQDYSSV+YCL QLFEKVE
Sbjct: 121 PNIGGAWSQEAMAQNSLVIDSVRLATQFLAPKGTFVTKVFRSQDYSSVIYCLNQLFEKVE 180
Query: 181 VDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEP-RKVVDVLRGTKQKRH 239
VDKPAASRSASAEI++LG++YKAPAKIDPRLLD+K+LFQGS EP RKVVDVLRGTKQKRH
Sbjct: 181 VDKPAASRSASAEIFVLGLRYKAPAKIDPRLLDIKHLFQGSDEPQRKVVDVLRGTKQKRH 240
Query: 240 RDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALC 299
RDGYEDG++ +RKVS A DFIWS++PLEILGSVTSI F D ++DH+LTTEEVK LC
Sbjct: 241 RDGYEDGESIVRKVSSAADFIWSDSPLEILGSVTSIAFDDEVSLPLRDHDLTTEEVKHLC 300
Query: 300 DDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEEL 359
DDLRVLGKQDFKHLLKWRMQI+KA SS++KA+ S E E EED D+R+LNEME+L
Sbjct: 301 DDLRVLGKQDFKHLLKWRMQIRKALSSSQKAS--PSIGKGGEDEKEEDEDDRLLNEMEDL 358
Query: 360 KYAMDQRKKREKKLLAKKRAKDKARKAT-GMQIDVMQDDYTDHELFSLSSIKGKKDLAAV 418
AM+++KKREKKLLAK+RAKDK RKAT GMQID D YTD ELFSLSSIKGKKDL AV
Sbjct: 359 TNAMERKKKREKKLLAKRRAKDKVRKATGGMQIDATADGYTDLELFSLSSIKGKKDLVAV 418
Query: 419 EYDD-DDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENYVAKR 477
+ D D N D E+E + + QEH SD+DSDEERR++DEQ+EE+LDQAYE +V KR
Sbjct: 419 DAADYDHENGGLRDGENEETDEENQEHSPSDVDSDEERRRFDEQMEEILDQAYERFVTKR 478
Query: 478 GGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDANPLMVPLDDGIRPTQ 537
GST QRKRAK+AYA+ QL EGD D D +H+ YDSDK+ GD +ANPLMVP +DG PT+
Sbjct: 479 EGSTKQRKRAKQAYAE--QLLEGDGDNDIVHSDYDSDKETGDHEANPLMVPFNDGEVPTE 536
Query: 538 EEITNKWFSQEIFAEAVQNGD--------LGKLGSEDETQVDKQAEKHSIPEKAKQKMAN 589
EEIT KWF Q+IFA+A ++GD L K SEDE VD Q ++ + P+K+ A
Sbjct: 537 EEITRKWFDQDIFAKAAEDGDLETAEARNLEKYESEDEMLVDGQEKEIATPKKS----AK 592
Query: 590 DAAGPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRKK 649
+AAG T S E DFEIVPAP DSSDDSSSDESED++VD+KAEILACAKKMLRKK
Sbjct: 593 NAAGSDRTQPPSSTAENDFEIVPAPATDSSDDSSSDESEDDDVDSKAEILACAKKMLRKK 652
Query: 650 QREQILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKK 709
+REQ+LDD+YN+YMFDD+GLP WF+EEE+RH Q I+PVTKEEIAAM+AQFKEI+ARPAKK
Sbjct: 653 RREQMLDDSYNKYMFDDEGLPGWFVEEEKRHCQPIKPVTKEEIAAMRAQFKEINARPAKK 712
Query: 710 VAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKEYVVA 769
VAEAKARKKRVA RKLEKVRKKAN IS Q +ISD SK + IEQLYK A PKRPKKEYVVA
Sbjct: 713 VAEAKARKKRVAARKLEKVRKKANDISKQTEISDHSKGRLIEQLYKKAAPKRPKKEYVVA 772
Query: 770 KKGVQVRAGKGKVLVDPRMKKDSR 793
KKGV V+ GKGKVLVD RMKKD+R
Sbjct: 773 KKGVTVKVGKGKVLVDRRMKKDAR 796
>gi|357474413|ref|XP_003607491.1| AdoMet-dependent rRNA methyltransferase spb1 [Medicago truncatula]
gi|355508546|gb|AES89688.1| AdoMet-dependent rRNA methyltransferase spb1 [Medicago truncatula]
Length = 868
Score = 1085 bits (2806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 561/873 (64%), Positives = 671/873 (76%), Gaps = 53/873 (6%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
K KGKHRLDKYY LAKEHGY SRASWKLVQ++SKF FL SS +VLDLCAAPGGWMQVAV
Sbjct: 4 AKAKGKHRLDKYYYLAKEHGYCSRASWKLVQINSKFHFLESSRSVLDLCAAPGGWMQVAV 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
QRVPV LV+G+DL PI PIRGA+++++DIT+PEC++RV+K+M E+G RAFD++LHDGSP
Sbjct: 64 QRVPVDHLVIGVDLTPIKPIRGAIAIQEDITRPECKSRVRKIMNENGYRAFDVILHDGSP 123
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVGGAWAQEA SQN+LVID++KLATQFLAPKGTFVTKVFRSQDY+SV++C+K+LFEKVEV
Sbjct: 124 NVGGAWAQEATSQNSLVIDAIKLATQFLAPKGTFVTKVFRSQDYNSVVWCMKKLFEKVEV 183
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEP-RKVVDVLRGTKQKRHR 240
+KP ASRS SAEIY+LGIKY APAKIDPR+LD+K+LF+ S +P K+VDVL KQKRHR
Sbjct: 184 EKPPASRSESAEIYILGIKYLAPAKIDPRILDIKHLFEASAQPIAKMVDVLGNNKQKRHR 243
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
DGYEDG+TTLRKVS A +F+W++ PLEILGSVTSI+F DPA IKDH+LTTEEVK+LC+
Sbjct: 244 DGYEDGNTTLRKVSSAANFVWTDAPLEILGSVTSISFTDPADIPIKDHDLTTEEVKSLCE 303
Query: 301 DLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDA---DNRVLNEME 357
DLRVLGKQDFKHLLKWR+ I+KA S A+K T PA+ + E ENE D D+R+LNEME
Sbjct: 304 DLRVLGKQDFKHLLKWRINIRKALSPAKK-TEPATTA---EVENEHDVVDEDDRLLNEME 359
Query: 358 ELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSIKGKKDLAA 417
EL AMD++KKREKK+L+K+RAKDKARKATGMQ+D ++ DY DHELFSL+S+KGKKDL A
Sbjct: 360 ELTNAMDRKKKREKKILSKRRAKDKARKATGMQVDAVE-DYVDHELFSLASMKGKKDLVA 418
Query: 418 VEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENYVAKR 477
V+ D + D + N+ EH SSD+DSDEERR+YDEQ+E++L+QAYE +V K+
Sbjct: 419 VDTTDYEGGEGEVDDSENDENKGGSEHSSSDLDSDEERRRYDEQMEDLLEQAYERFVIKK 478
Query: 478 GGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDANPLMVPLDDGIRPTQ 537
G+ QRKR KK+Y + QL E ED+D + + YDSD DQ +ANPLMVPL DG PTQ
Sbjct: 479 EGTAQQRKRIKKSYDADSQLLEAGEDDDIVPSKYDSDDDQDVQEANPLMVPLTDGTGPTQ 538
Query: 538 EEITNKWFSQEIFAEAVQNGDLGKLGSEDETQVD--------------------KQAEKH 577
EEITN WFSQ++FAEAV+ G K SE+E +D K E
Sbjct: 539 EEITNMWFSQDVFAEAVEEGGFEKDDSENEMDIDGLKEKPFVAEKIKENKPVAEKIKENK 598
Query: 578 SIPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAE 637
S+ EK K+ + T +QVS E DFEIVPAP + D SS + +++V KAE
Sbjct: 599 SVAEKIKENKMTTSVEADRTQSQVSN-EMDFEIVPAPA--TDSDDSSSDESEDDVGKKAE 655
Query: 638 ILACAKKMLRKKQREQILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKA 697
ILA AKKMLRKKQREQ+LDDAYN+YMFDD GLP WFL+EER+HR ++PVTKEE+AAMKA
Sbjct: 656 ILAYAKKMLRKKQREQMLDDAYNKYMFDDQGLPKWFLDEERKHRVPVKPVTKEEVAAMKA 715
Query: 698 QFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSA 757
QFK ID RPAKKVAEAKARKKRVAMRK+EKVRKKAN ISDQ DISDRSK KQI++LYK+A
Sbjct: 716 QFKAIDTRPAKKVAEAKARKKRVAMRKIEKVRKKANAISDQPDISDRSKSKQIDRLYKNA 775
Query: 758 VPKRPKKEYVVAKKGVQVRAGKGKVLVDPRMKKDSRTHGSGKARKGGSK----------- 806
VPKRP+KEYV AKKGVQV+AGKGKVLVD RMK D+R G GK K GSK
Sbjct: 776 VPKRPQKEYVTAKKGVQVKAGKGKVLVDRRMKSDARKSGMGKGGKRGSKAKGGKAPKGGK 835
Query: 807 ----------KGNIGKARKGKGSVKASSKKGKK 829
K +G + KGS S KKG+K
Sbjct: 836 APKGGRAPSGKAPMGGGKAPKGSRAPSGKKGRK 868
>gi|17381234|gb|AAL36036.1| AT4g25730/F14M19_10 [Arabidopsis thaliana]
Length = 821
Score = 978 bits (2529), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/825 (63%), Positives = 657/825 (79%), Gaps = 19/825 (2%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGKVKGKHRLDKYYRLAKE G+RSRAS+KL+QLD+K+S L S+HAVLDLCAAPGGWMQVA
Sbjct: 1 MGKVKGKHRLDKYYRLAKERGFRSRASYKLLQLDAKYSLLHSAHAVLDLCAAPGGWMQVA 60
Query: 61 VQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
V++VPVGSLVLG+DLVPI P+RG V++ QDIT+ EC++++K+VME+HGV AF+LVLHDGS
Sbjct: 61 VEKVPVGSLVLGIDLVPILPVRGCVTMTQDITRTECKSKIKQVMEQHGVSAFNLVLHDGS 120
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
PNVGGAWAQEAMSQNALVIDSV+LAT+FLA G VTKVFRS+DY+SVLYCL +LFEKVE
Sbjct: 121 PNVGGAWAQEAMSQNALVIDSVRLATEFLARNGNLVTKVFRSRDYNSVLYCLGRLFEKVE 180
Query: 181 VDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEP-RKVVDVLRGTKQKRH 239
V KP ASRSASAE YL+G+KY APAKIDPRLLD ++LF+ S EP RKVVDVL G+KQKR+
Sbjct: 181 VFKPPASRSASAETYLVGLKYLAPAKIDPRLLDYRHLFKESAEPTRKVVDVLGGSKQKRN 240
Query: 240 RDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALC 299
RDGYEDG++ LR+V+ A DFIWS NPL++LG+ TSI+F D A +K+H+LTTEE+K LC
Sbjct: 241 RDGYEDGESILRRVASAADFIWSENPLDVLGTTTSISFDDQASLPLKEHDLTTEEIKILC 300
Query: 300 DDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEG-ENEEDADNRVLNEMEE 358
DDL VLGK DFKH+LKWRMQI+KA + +K + P G E+EE+ D+++LNE+EE
Sbjct: 301 DDLPVLGKNDFKHILKWRMQIRKALTPEKKEV---AKPEPDVGKEDEENEDDKLLNELEE 357
Query: 359 LKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSIKGKKDLAAV 418
L +D++KK+ KK+LAK+RAKDKARKATG Q+DV++D + D+ELFSL++IKGKKDL AV
Sbjct: 358 LTNTVDRKKKQAKKILAKRRAKDKARKATGPQMDVLEDGFVDNELFSLNAIKGKKDLMAV 417
Query: 419 EYDDDDVNAAAEDSEDERPNRDT-QEHVSSDIDSDEERRKYDEQLEEVLDQAYENYVAKR 477
+ D+DD N A DSE+E + SD DSDEER+KY EQ+EE+ +QAYE Y+ K+
Sbjct: 418 DNDEDD-NGNAVDSENEDHGEGASDDSKDSDRDSDEERQKYTEQMEEIFEQAYERYMVKK 476
Query: 478 GGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDANPLMVPLDDGIRPTQ 537
GS QRKRA++A+A+ +L EGD DE+ M YDSD ++ +ANPL+VPLDDG+ T+
Sbjct: 477 EGSAKQRKRARQAHAE--KLEEGDGDEE-MKIDYDSDMNEEKDEANPLVVPLDDGVVQTK 533
Query: 538 EEITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKMANDAAGPKST 597
EEI+N+WFSQ IFAEAV+ GDLGK SEDE K+++ S P+K+KQK + + +
Sbjct: 534 EEISNQWFSQNIFAEAVEEGDLGKDDSEDEIANKKKSKNLSKPDKSKQKASKASVLSDQS 593
Query: 598 HNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQREQILDD 657
S+ E +FE+VPAP DS DSSS++ V TKAEILACAKKMLRKKQREQ+LDD
Sbjct: 594 LPNSSKKEDEFEVVPAPATDSDSDSSSEDD----VHTKAEILACAKKMLRKKQREQMLDD 649
Query: 658 AYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARK 717
AYN++MF D+GLP WF+++E++HRQ ++PVTK+E+ AMKAQFKEI+ARPAKKVAEAKARK
Sbjct: 650 AYNKHMFVDEGLPKWFVDDEKQHRQPMKPVTKDEVNAMKAQFKEINARPAKKVAEAKARK 709
Query: 718 KRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAV-PKRPKKEYVVAKKGVQVR 776
KR A ++LEKVRKKAN ISD ADISDRSK K I++LYK A P++P+KE VV+KKGV V+
Sbjct: 710 KRAAQKRLEKVRKKANTISDTADISDRSKDKMIDKLYKKAAEPRKPRKELVVSKKGVGVK 769
Query: 777 AGKGKVLVDPRMKKDSRTHGSGK----ARKGGSKKGNIGKARKGK 817
GKG+ VD RMK D R G GK +KG K G GK GK
Sbjct: 770 VGKGQKRVDRRMKSDDRKRGRGKPGRNGQKGTGKAGQKGKRPAGK 814
>gi|22328933|ref|NP_194303.2| FtsJ-like methyltransferase family protein [Arabidopsis thaliana]
gi|332659706|gb|AEE85106.1| FtsJ-like methyltransferase family protein [Arabidopsis thaliana]
Length = 821
Score = 978 bits (2529), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/825 (63%), Positives = 657/825 (79%), Gaps = 19/825 (2%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGKVKGKHRLDKYYRLAKE G+RSRAS+KL+QLD+K+S L S+HAVLDLCAAPGGWMQVA
Sbjct: 1 MGKVKGKHRLDKYYRLAKERGFRSRASYKLLQLDAKYSLLHSAHAVLDLCAAPGGWMQVA 60
Query: 61 VQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
V++VPVGSLVLG+DLVPI P+RG V++ QDIT+ EC++++K+VME+HGV AF+LVLHDGS
Sbjct: 61 VEKVPVGSLVLGIDLVPILPVRGCVTMTQDITRTECKSKIKQVMEQHGVSAFNLVLHDGS 120
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
PNVGGAWAQEAMSQNALVIDSV+LAT+FLA G VTKVFRS+DY+SVLYCL +LFEKVE
Sbjct: 121 PNVGGAWAQEAMSQNALVIDSVRLATEFLARNGNLVTKVFRSRDYNSVLYCLGRLFEKVE 180
Query: 181 VDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEP-RKVVDVLRGTKQKRH 239
V KP ASRSASAE YL+G+KY APAKIDPRLLD ++LF+ S EP RKVVDVL G+KQKR+
Sbjct: 181 VFKPPASRSASAETYLVGLKYLAPAKIDPRLLDYRHLFKESAEPTRKVVDVLGGSKQKRN 240
Query: 240 RDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALC 299
RDGYEDG++ LR+V+ A DFIWS NPL++LG+ TSI+F D A +K+H+LTTEE+K LC
Sbjct: 241 RDGYEDGESILRRVASAADFIWSENPLDVLGTTTSISFDDQASLPLKEHDLTTEEIKILC 300
Query: 300 DDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEG-ENEEDADNRVLNEMEE 358
DDL VLGK DFKH+LKWRMQI+KA + +K + P G E+EE+ D+++LNE+EE
Sbjct: 301 DDLPVLGKNDFKHILKWRMQIRKALTPEKKEV---AKPEPDVGKEDEENEDDKLLNELEE 357
Query: 359 LKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSIKGKKDLAAV 418
L +D++KK+ KK+LAK+RAKDKARKATG Q+DV++D + D+ELFSL++IKGKKDL AV
Sbjct: 358 LTNTVDRKKKQAKKILAKRRAKDKARKATGPQMDVLEDGFVDNELFSLNAIKGKKDLMAV 417
Query: 419 EYDDDDVNAAAEDSEDERPNRDT-QEHVSSDIDSDEERRKYDEQLEEVLDQAYENYVAKR 477
+ D+DD N A DSE+E + SD DSDEER+KY EQ+EE+ +QAYE Y+ K+
Sbjct: 418 DNDEDD-NGNAVDSENEDHGEGASDDSKDSDRDSDEERQKYTEQMEEIFEQAYERYMVKK 476
Query: 478 GGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDANPLMVPLDDGIRPTQ 537
GS QRKRA++A+A+ +L EGD DE+ M YDSD ++ +ANPL+VPLDDG+ T+
Sbjct: 477 EGSAKQRKRARQAHAE--KLEEGDGDEE-MKIDYDSDMNEEKDEANPLVVPLDDGVVQTK 533
Query: 538 EEITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKMANDAAGPKST 597
EEI+N+WFSQ IFAEAV+ GDLGK SEDE K+++ S P+K+KQK + + +
Sbjct: 534 EEISNQWFSQNIFAEAVEEGDLGKDDSEDEIANKKKSKNLSKPDKSKQKASKASVLSDQS 593
Query: 598 HNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQREQILDD 657
S+ E +FE+VPAP DS DSSS++ V TKAEILACAKKMLRKKQREQ+LDD
Sbjct: 594 LPNSSKKEDEFEVVPAPATDSDSDSSSEDD----VHTKAEILACAKKMLRKKQREQMLDD 649
Query: 658 AYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARK 717
AYN++MF D+GLP WF+++E++HRQ ++PVTK+E+ AMKAQFKEI+ARPAKKVAEAKARK
Sbjct: 650 AYNKHMFVDEGLPKWFVDDEKQHRQPMKPVTKDEVNAMKAQFKEINARPAKKVAEAKARK 709
Query: 718 KRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAV-PKRPKKEYVVAKKGVQVR 776
KR A ++LEKVRKKAN ISD ADISDRSK K I++LYK A P++P+KE VV+KKGV V+
Sbjct: 710 KRAAQKRLEKVRKKANTISDTADISDRSKDKMIDKLYKKAAEPRKPRKELVVSKKGVGVK 769
Query: 777 AGKGKVLVDPRMKKDSRTHGSGK----ARKGGSKKGNIGKARKGK 817
GKG+ VD RMK D R G GK +KG K G GK GK
Sbjct: 770 VGKGQKRVDRRMKSDDRKRGGGKPGRNGQKGTGKAGQKGKRPAGK 814
>gi|297799420|ref|XP_002867594.1| AT4g25730/F14M19_10 [Arabidopsis lyrata subsp. lyrata]
gi|297313430|gb|EFH43853.1| AT4g25730/F14M19_10 [Arabidopsis lyrata subsp. lyrata]
Length = 821
Score = 976 bits (2522), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/824 (63%), Positives = 658/824 (79%), Gaps = 17/824 (2%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGKVKGKHRLDKYYRLAKE G+RSRAS+KL+QLD+K+S L SSHAVLDLCAAPGGWMQVA
Sbjct: 1 MGKVKGKHRLDKYYRLAKERGFRSRASYKLLQLDAKYSLLHSSHAVLDLCAAPGGWMQVA 60
Query: 61 VQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
V++VPVGSLVLG+DLVPI P+RG V++ QDIT+ EC++++K+VME+HGV AF+LVLHDGS
Sbjct: 61 VEKVPVGSLVLGIDLVPILPVRGCVTMTQDITRSECKSKIKQVMEQHGVSAFNLVLHDGS 120
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
PNVGGAWAQEAMSQNALVIDSV+LAT+FLA G +TKVFRS+DY++VLYCL +LFEKVE
Sbjct: 121 PNVGGAWAQEAMSQNALVIDSVRLATEFLARNGNLITKVFRSRDYNAVLYCLGRLFEKVE 180
Query: 181 VDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEP-RKVVDVLRGTKQKRH 239
V KP ASRSASAE YL+G+KY APAKIDPRLLD ++LF+ + EP RKVVDVL G+KQKR+
Sbjct: 181 VFKPPASRSASAETYLVGLKYLAPAKIDPRLLDYRHLFKEAAEPTRKVVDVLGGSKQKRN 240
Query: 240 RDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALC 299
RDGYEDG++ LR+V+ A DFIWS NPLE+LG+VTSI+F D A +K+H+LTTEE+K LC
Sbjct: 241 RDGYEDGESILRRVASAADFIWSENPLEVLGTVTSISFDDQASLPLKEHDLTTEEIKILC 300
Query: 300 DDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEG-ENEEDADNRVLNEMEE 358
DDL VLGK DFKH+LKWRMQI+KA + +K + P G E+EE+ D+++LNE+EE
Sbjct: 301 DDLPVLGKNDFKHILKWRMQIRKALTPEKKEV---AKPEPDVGKEDEENEDDKLLNELEE 357
Query: 359 LKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSIKGKKDLAAV 418
L +D++KK+ KK+LAK+RAKDK RKAT Q+DV++D Y D+ELFSL++IKGKKDL AV
Sbjct: 358 LTNTVDRKKKQAKKILAKRRAKDKTRKATNPQMDVLEDGYVDNELFSLAAIKGKKDLMAV 417
Query: 419 EYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENYVAKRG 478
+ DDDD A + ++R + + SDIDSDEER+KY EQ+EE+ D+AYE Y+ K+
Sbjct: 418 DNDDDDDGNADDSENEDRGEGASDDSKDSDIDSDEERQKYTEQMEEIFDEAYERYMVKKE 477
Query: 479 GSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDANPLMVPLDDGIRPTQE 538
GS QRKRA++A+A+ +L EGD DE+ M YDSD ++ +ANPL+VPLDDG T+E
Sbjct: 478 GSAKQRKRARQAHAE--KLEEGDGDEE-MKIDYDSDLNEEKDEANPLVVPLDDGEVQTKE 534
Query: 539 EITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKMANDAAGPKSTH 598
EI+N+WFSQ IFAEAV+ GDLGK EDET ++K+++ S P+K+KQK + + +
Sbjct: 535 EISNQWFSQNIFAEAVEEGDLGKDDGEDETPIEKKSKNLSKPDKSKQKASKASLLSDQSL 594
Query: 599 NQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQREQILDDA 658
S+ E DFE+VPAP DS DSSSD+ V TKAEILACAKKMLRKKQREQ+LDDA
Sbjct: 595 PNSSKKEEDFEVVPAPATDSDSDSSSDDD----VHTKAEILACAKKMLRKKQREQMLDDA 650
Query: 659 YNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKK 718
YN++MF D+GLP WF+++E++HRQ ++P+TKEE+ AMKAQFKEI+ARPAKKVAEAKARKK
Sbjct: 651 YNKHMFVDEGLPKWFVDDEKQHRQPMKPITKEEVNAMKAQFKEINARPAKKVAEAKARKK 710
Query: 719 RVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAV-PKRPKKEYVVAKKGVQVRA 777
R A ++LEKVRKKAN ISD ADISDRSK K I++LYK A P++P+KE VV+KKGV V+
Sbjct: 711 RAAQKRLEKVRKKANTISDTADISDRSKDKMIDKLYKKAAEPRKPRKELVVSKKGVGVKV 770
Query: 778 GKGKVLVDPRMKKDSRTHGSGK----ARKGGSKKGNIGKARKGK 817
GKG+ VD RMK D+R G GK +KG K G GK GK
Sbjct: 771 GKGQKRVDRRMKSDARKRGGGKPGRNGQKGTGKAGQKGKRPAGK 814
>gi|357473309|ref|XP_003606939.1| AdoMet-dependent rRNA methyltransferase spb1 [Medicago truncatula]
gi|355507994|gb|AES89136.1| AdoMet-dependent rRNA methyltransferase spb1 [Medicago truncatula]
Length = 780
Score = 954 bits (2467), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/837 (60%), Positives = 618/837 (73%), Gaps = 71/837 (8%)
Query: 3 KVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQ 62
K KGKHRL K+Y LAKEHGYR RASWKL+QL+SKF FL SS AVL+LCAAPGGW QVAVQ
Sbjct: 5 KAKGKHRLHKFYFLAKEHGYRCRASWKLIQLNSKFHFLESSCAVLNLCAAPGGWTQVAVQ 64
Query: 63 RVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPN 122
RVPV LV+G+DL P+ PIRG +S+++DIT+PECR+RV+K+M E+G AFD++LHDGSPN
Sbjct: 65 RVPVDHLVIGVDLAPMKPIRGVISIQEDITRPECRSRVRKIMNENGYSAFDVILHDGSPN 124
Query: 123 VGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVD 182
VGGAWAQEA +QN+LVID+VKLATQFLAPKGTFVTKVFRSQDY+SV++CLK+LFEKVEV+
Sbjct: 125 VGGAWAQEATTQNSLVIDAVKLATQFLAPKGTFVTKVFRSQDYNSVVWCLKKLFEKVEVE 184
Query: 183 KPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEP-RKVVDVLRGTKQKRHRD 241
KP ASRS SAEIYLLGIKY APA+IDPR+LD+K+LF+ S +P KVVDVLR T
Sbjct: 185 KPPASRSESAEIYLLGIKYLAPARIDPRILDIKHLFEASAQPLAKVVDVLRDT------- 237
Query: 242 GYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDD 301
T+F+W++ PLEILGSVTSI F DPA IKDH+LTTEE
Sbjct: 238 ---------------TNFVWADAPLEILGSVTSICFTDPADLPIKDHDLTTEE------- 275
Query: 302 LRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEELKY 361
VLGKQDFKHLLKWR+ I+KA S A+K T PA+ +A ++E D ++R+LNEMEEL
Sbjct: 276 --VLGKQDFKHLLKWRINIRKALSPAKK-TEPAT-TAEVGNDHEGDENDRILNEMEELTN 331
Query: 362 AMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSIKGKKDLAAVEYD 421
AMD++KKREKK+LAK+RAKDKARKATGMQ+DV++D Y DHELFSL+S+KGKKDL AV+
Sbjct: 332 AMDRKKKREKKILAKRRAKDKARKATGMQMDVVEDGYVDHELFSLASMKGKKDLVAVDTT 391
Query: 422 DDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENYVAKRGGST 481
D + D + N+ EH SSD+DSDEERR+YDEQ+E++L+QAYE +V K+ G+
Sbjct: 392 DYEGGEGEVDDSENEENKGGLEHSSSDLDSDEERRRYDEQMEDLLEQAYERFVIKKEGTA 451
Query: 482 MQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDANPLMVPLDDGIRPTQEEIT 541
QRKR KK Y D D + + YDS +D +AN L+VPL DG PTQEEIT
Sbjct: 452 KQRKRIKKFY---------DADSLLLESKYDSVEDDVQ-EANSLLVPLTDGTGPTQEEIT 501
Query: 542 NKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKMANDAAGPKSTHNQV 601
N WFSQ++FAEAV+ G K E E +D EK + EK + + T +Q
Sbjct: 502 NMWFSQDVFAEAVEEGGFEKDDGESEMDIDGIKEKTPVAEKINENKTAASVEIDRTRSQA 561
Query: 602 SEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQREQILDDAYNR 661
S+ E DFEIVPAP A + D SS + +++V KAEILA A+KMLRKKQRE +LDDAYN+
Sbjct: 562 SK-EMDFEIVPAPAA-TDSDDSSSDESEDDVAKKAEILAYAQKMLRKKQREYMLDDAYNK 619
Query: 662 YMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVA 721
Y+FDD GLP WFL+EER+HR ++P+TKE++A VAEAKARKKRVA
Sbjct: 620 YVFDDQGLPKWFLDEERKHRVPVKPITKEQVA----------------VAEAKARKKRVA 663
Query: 722 MRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKEYVVAKKGVQVRAGKGK 781
MRK+EK+RKKAN ISDQ+DISDRSK KQI++LYK +VPKRP+KEYVVAKKGVQV+ G+GK
Sbjct: 664 MRKIEKIRKKANAISDQSDISDRSKSKQIDRLYKKSVPKRPQKEYVVAKKGVQVKTGRGK 723
Query: 782 VLVDPRMKKDSRTHGSGKARKGGSK---------KGNIGKARKGKGSVKASSKKGKK 829
VLVD RMKK+ R +G GKA K GS + IGK GKGS KAS+KKG+K
Sbjct: 724 VLVDRRMKKNMRKNGIGKAGKRGSNAKGKAPKGGRAPIGKIPMGKGSSKASAKKGRK 780
>gi|4539291|emb|CAB39594.1| putative protein [Arabidopsis thaliana]
gi|7269423|emb|CAB81383.1| putative protein [Arabidopsis thaliana]
Length = 821
Score = 952 bits (2461), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/833 (62%), Positives = 654/833 (78%), Gaps = 18/833 (2%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGKVKGKHRLDKYYRLAKE G+RSRAS+KL+QLD+K+S L S+HAVLDLCAAPGGWMQVA
Sbjct: 1 MGKVKGKHRLDKYYRLAKERGFRSRASYKLLQLDAKYSLLHSAHAVLDLCAAPGGWMQVA 60
Query: 61 VQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
V++VPVGSLVLG+DLVPI P+RG V++ QDIT+ EC++++K+VME+HGV AF+LVLHDGS
Sbjct: 61 VEKVPVGSLVLGIDLVPILPVRGCVTMTQDITRTECKSKIKQVMEQHGVSAFNLVLHDGS 120
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
PNVGGAWAQEAMSQNALVIDSV+LAT+FLA G VTK+ + + + + L QLFEKVE
Sbjct: 121 PNVGGAWAQEAMSQNALVIDSVRLATEFLARNGNLVTKMCVPEPFFLLAFLLVQLFEKVE 180
Query: 181 VDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEP-RKVVDVLRGTKQKRH 239
V KP ASRSASAE YL+G+KY APAKIDPRLLD ++LF+ S EP RKVVDVL G+KQKR+
Sbjct: 181 VFKPPASRSASAETYLVGLKYLAPAKIDPRLLDYRHLFKESAEPTRKVVDVLGGSKQKRN 240
Query: 240 RDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALC 299
RDGYEDG++ LR+V+ A DFIWS NPL++LG+ TSI+F D A +K+H+LTTEE+K LC
Sbjct: 241 RDGYEDGESILRRVASAADFIWSENPLDVLGTTTSISFDDQASLPLKEHDLTTEEIKILC 300
Query: 300 DDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEG-ENEEDADNRVLNEMEE 358
DDL VLGK DFKH+LKWRMQI+KA + +K + P G E+EE+ D+++LNE+EE
Sbjct: 301 DDLPVLGKNDFKHILKWRMQIRKALTPEKKEV---AKPEPDVGKEDEENEDDKLLNELEE 357
Query: 359 LKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSIKGKKDLAAV 418
L +D++KK+ KK+LAK+RAKDKARKATG Q+DV++D + D+ELFSL++IKGKKDL AV
Sbjct: 358 LTNTVDRKKKQAKKILAKRRAKDKARKATGPQMDVLEDGFVDNELFSLNAIKGKKDLMAV 417
Query: 419 EYDDDDVNAAAEDSEDERPNRDT-QEHVSSDIDSDEERRKYDEQLEEVLDQAYENYVAKR 477
+ D+DD N A DSE+E + SD DSDEER+KY EQ+EE+ +QAYE Y+ K+
Sbjct: 418 DNDEDD-NGNAVDSENEDHGEGASDDSKDSDRDSDEERQKYTEQMEEIFEQAYERYMVKK 476
Query: 478 GGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDANPLMVPLDDGIRPTQ 537
GS QRKRA++A+A+ +L EGD DE+ M YDSD ++ +ANPL+VPLDDG+ T+
Sbjct: 477 EGSAKQRKRARQAHAE--KLEEGDGDEE-MKIDYDSDMNEEKDEANPLVVPLDDGVVQTK 533
Query: 538 EEITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKMANDAAGPKST 597
EEI+N+WFSQ IFAEAV+ GDLGK SEDE K+++ S P+K+KQK + + +
Sbjct: 534 EEISNQWFSQNIFAEAVEEGDLGKDDSEDEIANKKKSKNLSKPDKSKQKASKASVLSDQS 593
Query: 598 HNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQREQILDD 657
S+ E +FE+VPAP DS DSSS++ V TKAEILACAKKMLRKKQREQ+LDD
Sbjct: 594 LPNSSKKEDEFEVVPAPATDSDSDSSSEDD----VHTKAEILACAKKMLRKKQREQMLDD 649
Query: 658 AYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARK 717
AYN++MF D+GLP WF+++E++HRQ ++PVTK+E+ AMKAQFKEI+ARPAKKVAEAKARK
Sbjct: 650 AYNKHMFVDEGLPKWFVDDEKQHRQPMKPVTKDEVNAMKAQFKEINARPAKKVAEAKARK 709
Query: 718 KRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAV-PKRPKKEYVVAKKGVQVR 776
KR A ++LEKVRKKAN ISD ADISDRSK K I++LYK A P++P+KE VV+KKGV V+
Sbjct: 710 KRAAQKRLEKVRKKANTISDTADISDRSKDKMIDKLYKKAAEPRKPRKELVVSKKGVGVK 769
Query: 777 AGKGKVLVDPRMKKDSRTHGSGKARKGGSKKGNIGKARKGKGSVKASSKKGKK 829
GKG+ VD RMK D R G GK + G K GKA + KG A +G+K
Sbjct: 770 VGKGQKRVDRRMKSDDRKRGGGKPGRNGQK--GTGKAGQ-KGKRPAGKPRGRK 819
>gi|297809739|ref|XP_002872753.1| hypothetical protein ARALYDRAFT_911801 [Arabidopsis lyrata subsp.
lyrata]
gi|297318590|gb|EFH49012.1| hypothetical protein ARALYDRAFT_911801 [Arabidopsis lyrata subsp.
lyrata]
Length = 804
Score = 917 bits (2370), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/815 (62%), Positives = 629/815 (77%), Gaps = 25/815 (3%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGKVKGKHRLD YYRLAKE G RSRAS+KL+QLD+KF+FL SS VLDLCAAPGGWMQVA
Sbjct: 1 MGKVKGKHRLDTYYRLAKESGLRSRASYKLLQLDAKFNFLHSSRTVLDLCAAPGGWMQVA 60
Query: 61 VQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKP-ECRARVKKVMEEHGV-RAFDLVLHD 118
VQ+VPVGSLVLG+DLV IAP+RG V+++QDIT+ EC+A++KK +++HG + FDLVLHD
Sbjct: 61 VQKVPVGSLVLGIDLVKIAPVRGCVTIQQDITRTTECKAKIKKALKKHGTDKTFDLVLHD 120
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
GSPNVGGAW+QEAMSQNALVIDS+KLAT+FLAP G F+TK+FRS+DY SV+YCL +LFE
Sbjct: 121 GSPNVGGAWSQEAMSQNALVIDSLKLATEFLAPHGNFITKIFRSRDYDSVVYCLGELFEN 180
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEP-RKVVDVLRGTKQK 237
VEV KP ASRS SAE YLLG+ YKAP KI+P LLD + LF+ EP +KV DVL G+KQK
Sbjct: 181 VEVFKPMASRSTSAETYLLGLNYKAPDKINPNLLDYRQLFKVVAEPTKKVKDVLGGSKQK 240
Query: 238 RHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKA 297
R+RDGYEDG++ LRKV+ A DFIWS NPLEILG+VT I+F D A +K+H LTTEEVK
Sbjct: 241 RNRDGYEDGESILRKVASAADFIWSENPLEILGTVTCISFDDQASLPLKEHNLTTEEVKT 300
Query: 298 LCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEME 357
LCDDL VLGK DFKH+LKWRMQI+KA S +K E+EE+ D+++LNE+E
Sbjct: 301 LCDDLPVLGKNDFKHILKWRMQIRKALSPEKKEGTKKELDVGK--EDEENEDDKLLNELE 358
Query: 358 ELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSIKGKKDLAA 417
EL D++ KR KKLLAK+RAKD RKA G QI ++D Y DHELFSLS +KGKKDL
Sbjct: 359 ELTNTADRKNKRAKKLLAKRRAKDMTRKAIGPQIGALEDGYVDHELFSLSVMKGKKDLMT 418
Query: 418 V-EYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENYVAK 476
V +DD+ N +DSE+E D + S IDSDEER++Y+EQ+EE+ D+AY+ Y+ K
Sbjct: 419 VDNDEDDNDNGNVDDSENEEGASDDSK--DSVIDSDEERQRYNEQMEEIFDEAYDRYMVK 476
Query: 477 RGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDANPLMVPLDDGIRPT 536
+ GS QRKRA+ A+A+ +L +GD D M YDSD ++ + +ANPL+VPLDDG T
Sbjct: 477 KEGSAKQRKRARHAHAE--KLEDGDGDV-AMKLDYDSDMNEENDEANPLVVPLDDGEAQT 533
Query: 537 QEEITNKWFSQEIFAEAVQNGDLGKLG-SEDETQVDKQAEKHSIPEKAKQK--MANDAAG 593
+EEI+N+WFS++IFAEA ++GDLGK SEDE KQ++ S P K+KQK + D +
Sbjct: 534 KEEISNQWFSRDIFAEATEDGDLGKDDHSEDEMSTKKQSKNLSKPYKSKQKASVLFDQSF 593
Query: 594 PKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQREQ 653
P S++ E DF+IVPAP S DSSSD+ V KAEILACAKKMLRKKQRE+
Sbjct: 594 PNSSNK-----EDDFDIVPAPALGSDSDSSSDDD----VHAKAEILACAKKMLRKKQREE 644
Query: 654 ILD-DAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAE 712
+LD DAYN+YMF+D+GLP WFL++E++HRQ ++PVTKEE+ AMKAQFKEI+ARPAKKVAE
Sbjct: 645 MLDGDAYNKYMFEDEGLPKWFLDDEKQHRQPMKPVTKEEVNAMKAQFKEINARPAKKVAE 704
Query: 713 AKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAV-PKRPKKEYVVAKK 771
AKARKKR AM++LEKVRKKAN ISD ADIS+RSK K I++LYK A P++PKKE VV+KK
Sbjct: 705 AKARKKRAAMKRLEKVRKKANTISDTADISNRSKDKMIDKLYKKAAEPRKPKKELVVSKK 764
Query: 772 GVQVRAGKGKVLVDPRMKKDSRTHGSGKARKGGSK 806
GV V+ GKG+ VD RMK D+R G GK + G K
Sbjct: 765 GVGVKVGKGQKRVDRRMKSDARKRGGGKPSRNGKK 799
>gi|102139739|gb|ABF69946.1| FtsJ-like methyltransferase family protein [Musa acuminata]
Length = 847
Score = 907 bits (2344), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/850 (59%), Positives = 649/850 (76%), Gaps = 36/850 (4%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK+KGK R DK+Y LAKE GYRSRA++KL+QLD+K+ FL S+ ++LDLCAAPGGW+QVA
Sbjct: 1 MGKIKGKQRQDKFYYLAKEQGYRSRAAFKLLQLDAKYRFLPSARSILDLCAAPGGWLQVA 60
Query: 61 VQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
V+ PVGS V+G+DL PI P+RGA +L +DIT P CRA +K++M+ +G AFD+VLHDGS
Sbjct: 61 VRHAPVGSFVIGVDLFPIRPVRGAHALVEDITTPRCRAAIKRLMDSNGCSAFDVVLHDGS 120
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
PNVGGAWAQEA SQ++LV+DSV+LAT FLAPKGTFVTKVFRSQDYS+++YCLKQLFEKVE
Sbjct: 121 PNVGGAWAQEATSQSSLVVDSVRLATNFLAPKGTFVTKVFRSQDYSAIIYCLKQLFEKVE 180
Query: 181 VDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRHR 240
V KP ASRS SAEIY++G++YKAPAKIDPRLLD+K+LFQG++E KVVDVLRG+KQKR+R
Sbjct: 181 VTKPVASRSTSAEIYVIGLRYKAPAKIDPRLLDMKHLFQGAIEHPKVVDVLRGSKQKRNR 240
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
+GYE+G+TTL KV L +DF+WS PLE LGSV +++F DPAC I+DHE TT+EVK+LC+
Sbjct: 241 EGYEEGNTTLWKVGLVSDFVWSEAPLEFLGSVNALSFDDPACLPIRDHEFTTDEVKSLCE 300
Query: 301 DLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDA----DNRVLNEM 356
DL VL K FKHLLKWRM IKKA +SA+KA AP + E+D D+ +LNEM
Sbjct: 301 DLYVLDKSSFKHLLKWRMHIKKALASADKAVPKVDEDAPKVDDAEDDTKGNDDDSLLNEM 360
Query: 357 EELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSIKGKKDLA 416
EEL + +D++KK+ KKLL+K+RAK+KAR+A GMQID +D Y D +LFSLS+IKGKK+L+
Sbjct: 361 EELAHLLDRKKKKAKKLLSKRRAKEKARRAMGMQIDATEDSYFDRDLFSLSAIKGKKELS 420
Query: 417 AV---EYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENY 473
A+ E DD+ A DSEDE + SS++DSDEE+++YD QLEE+LD+AYE Y
Sbjct: 421 AIDSAELDDEYSKGDAADSEDETQTAMLHDDSSSEMDSDEEQKRYDAQLEEMLDEAYERY 480
Query: 474 VAKRGGSTMQRKRAKKAYAQED-QLSEGD------EDEDTMHTSYDSDKDQGDLDANPLM 526
V ++GG+T ++KRAK+ A D + EGD +DE H S ++NPL+
Sbjct: 481 VIRKGGNTKKQKRAKRDKASNDVDILEGDNGDGLVDDEIDQHLSAK--------ESNPLV 532
Query: 527 VPLDDGIRPTQEEITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKA--K 584
VPLD+ +PT E++ +WFSQ++F EA + K SEDE K+ + +P K+
Sbjct: 533 VPLDEDEQPTTEQLVERWFSQDVFTEAPTDDAFEKSDSEDE----KEEKFVKVPAKSVGN 588
Query: 585 QKMANDAAGPKSTHNQVSEVEGDFEIVPAPGADS--SDDSSSDESEDEEVDTKAEILACA 642
K + D P S + E DFEIVPA ++ SSSDESE+ + D+KAEILA A
Sbjct: 589 MKQSKDLTLPISKKPE----EEDFEIVPAERMETSDDSSSSSDESEEMDDDSKAEILAYA 644
Query: 643 KKMLRKKQREQILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEI 702
KKMLRKKQREQILDDAYN+YMFDD+GLP WF +EE++H Q +P+T+EE+AAMKAQF+EI
Sbjct: 645 KKMLRKKQREQILDDAYNKYMFDDEGLPKWFADEEKQHCQPTKPITREEVAAMKAQFREI 704
Query: 703 DARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRP 762
DARPAKKVAEAKARKKR AMRKLEKVR+KAN I+DQ DIS+RSK K I++LYK A+PK+P
Sbjct: 705 DARPAKKVAEAKARKKRAAMRKLEKVRQKANTIADQTDISERSKGKMIDRLYKKAMPKKP 764
Query: 763 KKEYVVAKKGVQVRAGKGKVLVDPRMKKDSRTHGSGKARKGGSKKGNIGKARKGKGSVKA 822
KKEYVVAKKGV+++ GKGKVLVD RMKKD+R+ G+G+ KGG KKG +KG+ KA
Sbjct: 765 KKEYVVAKKGVRMKVGKGKVLVDRRMKKDARSRGTGRPGKGGLKKGKGANGQKGQKGQKA 824
Query: 823 --SSKKGKKG 830
S+K +KG
Sbjct: 825 KQSAKSPRKG 834
>gi|242088869|ref|XP_002440267.1| hypothetical protein SORBIDRAFT_09g028780 [Sorghum bicolor]
gi|241945552|gb|EES18697.1| hypothetical protein SORBIDRAFT_09g028780 [Sorghum bicolor]
Length = 819
Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/806 (57%), Positives = 595/806 (73%), Gaps = 37/806 (4%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK KGK R DK+Y LAKE GYRSRA++KL+QLD++F FL ++ +VLDLCAAPGGW+QVA
Sbjct: 1 MGKAKGKQRQDKFYHLAKEQGYRSRAAFKLLQLDARFRFLPTARSVLDLCAAPGGWVQVA 60
Query: 61 VQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
V PVG+ V+G+DLVPI PIRGA SL +DIT +CRA V+++M+ +GV AFD+VLHDGS
Sbjct: 61 VNHAPVGAFVVGVDLVPIRPIRGAHSLTEDITTTKCRAAVRRLMDSNGVSAFDVVLHDGS 120
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
PNVGGAWAQEA SQ+ALVID+++LAT FLAPKG F+TKVFRSQDY++++YCLKQ FEKVE
Sbjct: 121 PNVGGAWAQEATSQSALVIDALRLATMFLAPKGAFITKVFRSQDYNAIMYCLKQFFEKVE 180
Query: 181 VDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRHR 240
KP+ASRS SAEIY++ KYKAPAKI P LLD+K+LF E K DV+ G K KRHR
Sbjct: 181 ATKPSASRSTSAEIYIICQKYKAPAKIQPELLDIKHLFSVVPEQTKSRDVMDGRK-KRHR 239
Query: 241 DGYEDGDTTLRKVSLATDFIWSN--NPLEILGSVTSITFGDPACSAIKDHELTTEEVKAL 298
DGYE+G+TTLRKV LA+DF+WS+ PLE LGS +I+F +P IK+HELTT+++K
Sbjct: 240 DGYEEGNTTLRKVGLASDFVWSDAQAPLEFLGSYNAISFDNPESLPIKNHELTTDDIKNF 299
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRV-LNEME 357
C+DL +L K FKH+LKWR++++K+ S++ + T + + EN + D+ V L EME
Sbjct: 300 CEDLLLLDKNSFKHILKWRIRLRKSLSASSQVTPKVNDAV----ENTKVTDDDVLLQEME 355
Query: 358 ELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSIKGKKDLAA 417
EL +D+ KKREKK L+K+RAKDKARKATGMQID DDY D +LFS+S IKG K L A
Sbjct: 356 ELTSVIDRNKKREKKRLSKRRAKDKARKATGMQIDATGDDYGDPDLFSISVIKGGKQLEA 415
Query: 418 VEYDDDDVNAAAEDSEDERPNRDTQEHVSSD--IDSDEERRKYDEQLEEVLDQAYENYVA 475
VE + +V DSE+E DTQ SD IDSDEE+++YD QLEE+LD+AYE +V
Sbjct: 416 VESAELNVEDEIGDSENE----DTQALEDSDEEIDSDEEQQRYDAQLEEMLDEAYERFVT 471
Query: 476 KRGGSTMQ-RKRAKKAYAQED-QLSEGDEDEDTMHTSYDSDKDQGDLDANPLMVPLDDGI 533
K+GG Q RKRAK+ D L EG ED+ + + D + NPL++ LD+
Sbjct: 472 KKGGEIKQERKRAKRINPDADADLLEGGEDDGDVEMDQ-DFDEDQDQETNPLLLSLDEQ- 529
Query: 534 RPTQEEITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKMANDAAG 593
RPT+E+I +W+SQ++F EAV Q D + E+ S+ K
Sbjct: 530 RPTKEQIVKQWYSQDVFTEAVTGV---------TEQSDTEDERESLQRNKKMDTGKKEKV 580
Query: 594 PKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDT------KAEILACAKKMLR 647
K+ Q + DFEIVPA + +DSSS E ++ + KAE+LA AKKMLR
Sbjct: 581 AKAQRLQ----QEDFEIVPAEPVRNEEDSSSSSDESDQSEDDLDDYRKAEVLAYAKKMLR 636
Query: 648 KKQREQILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPA 707
KKQREQILDDAYN++MFDD+GLP+WF+E+E+RHRQ ++PVT+EE+AAM+AQFKEIDARP+
Sbjct: 637 KKQREQILDDAYNKHMFDDEGLPNWFVEDEKRHRQPMKPVTREEVAAMRAQFKEIDARPS 696
Query: 708 KKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKEYV 767
KKVAEAKARKKRVAM+KL+K R+KA+ I+DQ DI++RSKRK I+Q+Y+ A+PKRP+KEYV
Sbjct: 697 KKVAEAKARKKRVAMKKLDKARQKADAIADQNDINERSKRKMIDQIYRKAMPKRPQKEYV 756
Query: 768 VAKKGVQVRAGKGKVLVDPRMKKDSR 793
VAKKGVQVRAGKGKVLVDPRMKKD R
Sbjct: 757 VAKKGVQVRAGKGKVLVDPRMKKDKR 782
>gi|115465501|ref|NP_001056350.1| Os05g0567400 [Oryza sativa Japonica Group]
gi|113579901|dbj|BAF18264.1| Os05g0567400 [Oryza sativa Japonica Group]
Length = 819
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/804 (59%), Positives = 611/804 (75%), Gaps = 30/804 (3%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK KGK R DK+Y LAKE GYRSRA++KL+QLD++F FL ++ AVLDLCAAPGGW+QVA
Sbjct: 1 MGKTKGKQRQDKFYHLAKEQGYRSRAAFKLLQLDARFRFLPTARAVLDLCAAPGGWVQVA 60
Query: 61 VQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
V PVG+ V+G+DLVPI PIRGA SL +DIT +CRA V+++M+ +GV AFD+VLHDGS
Sbjct: 61 VNHAPVGAFVVGVDLVPIRPIRGAHSLTEDITTTKCRAAVRRLMDSNGVAAFDVVLHDGS 120
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
PNVGGAWAQEA +Q++LVID+V+LAT FLAPKG F+TKVFRSQDY++++YCLKQLFEKVE
Sbjct: 121 PNVGGAWAQEATAQSSLVIDAVRLATMFLAPKGAFITKVFRSQDYNAIMYCLKQLFEKVE 180
Query: 181 VDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRHR 240
V KP ASRS SAEIY++ ++YKAPAKI P LLD+K+LF +P+KV D L+ +QKR+R
Sbjct: 181 VTKPTASRSTSAEIYIICLRYKAPAKIQPELLDIKHLFSVDPDPKKVRDPLKPDRQKRNR 240
Query: 241 DGYEDGDTTLRKVSLATDFIWS--NNPLEILGSVTSITFGDPACSAIKDHELTTEEVKAL 298
DGYE+G+TTLRKV LA+DFIWS PLE LGS +I+F DPA IK+HELTT+E+KAL
Sbjct: 241 DGYEEGNTTLRKVGLASDFIWSEGQTPLEFLGSFNAISFDDPASLPIKNHELTTDEIKAL 300
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEE 358
C+DL VL K FKH+LKWR++I+KA SS+E + T E D+++L EMEE
Sbjct: 301 CEDLYVLDKNSFKHILKWRIRIRKALSSSE----VTKKTDDTAVEVNVKDDDQLLQEMEE 356
Query: 359 LKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSIKGKKDLAAV 418
L +D++KKREKK +K+RAKDKARKATGMQID D+Y D +LFS+S+IKG K+L A+
Sbjct: 357 LTSVIDRKKKREKKRQSKRRAKDKARKATGMQIDATGDNYGDPDLFSISAIKGGKELQAI 416
Query: 419 EYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENYVAKRG 478
E + +V A DSE+E + T+E+ ++DSDEE+++YD QLEE+LD+AYE YV K+G
Sbjct: 417 ESAELNVEDAQGDSENE--DIQTREYSDEEMDSDEEQQRYDAQLEEMLDEAYERYVTKKG 474
Query: 479 GSTMQ-RKRAKKAY--AQEDQLSEGDEDEDTMHTSYDSDKDQGDLDANPLMVPLDDGIRP 535
G Q RKRAK+ A E+ L G++D D + SD++Q D + NPL++ L D +P
Sbjct: 475 GEVKQERKRAKRVNTDADEELLEGGEDDGDDVDMDQGSDEEQ-DQETNPLLLSL-DAEKP 532
Query: 536 TQEEITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKMANDAAGPK 595
T+E++ +WFSQ++F EA G + + SEDE + + K K+K A K
Sbjct: 533 TKEQMMEQWFSQDVFTEA-GTGVVEQSDSEDEREQLTRIAKKKADSGKKEKSA------K 585
Query: 596 STHNQVSEVEGDFEIVPAPGADS------SDDSSSDESEDEEVDTKAEILACAKKMLRKK 649
+ H Q + DFEIVPA + S D S + ED + DTKAE+LA A+KMLRKK
Sbjct: 586 AKHLQ----QDDFEIVPAEPVRTEDDSSSSSDESDELDEDLDDDTKAEVLAYARKMLRKK 641
Query: 650 QREQILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKK 709
QREQILDDAYN+YMFDD+GLP WF E+E+RH Q ++PVTKEE+AAM+AQFKEIDARPAKK
Sbjct: 642 QREQILDDAYNKYMFDDEGLPKWFAEDEKRHNQPMKPVTKEEVAAMRAQFKEIDARPAKK 701
Query: 710 VAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKEYVVA 769
VAEAKARKKRVAM+KL+K R+KA+ I+DQ DI+++SKRK I+++YK A+PK+P+KEYVVA
Sbjct: 702 VAEAKARKKRVAMKKLDKARQKADAIADQNDINEQSKRKMIDRIYKKAIPKKPQKEYVVA 761
Query: 770 KKGVQVRAGKGKVLVDPRMKKDSR 793
KKGVQVRAGKGK+LVD RMKKD R
Sbjct: 762 KKGVQVRAGKGKILVDKRMKKDKR 785
>gi|413948516|gb|AFW81165.1| hypothetical protein ZEAMMB73_695440 [Zea mays]
Length = 810
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/816 (57%), Positives = 597/816 (73%), Gaps = 58/816 (7%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK KGK R DK+Y LAKE GYRSRA++KL+QLD++F FL ++H+VLDLCAAPGGW+QVA
Sbjct: 1 MGKAKGKQRQDKFYHLAKEQGYRSRAAFKLLQLDARFRFLLTAHSVLDLCAAPGGWVQVA 60
Query: 61 VQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
V PVG+ V+G+DLVPI PIRGA SL +DIT +CRA V+++M+ +GV AFD+VLHDGS
Sbjct: 61 VNHAPVGAFVVGVDLVPIRPIRGAHSLTEDITTTKCRAAVRRLMDSNGVSAFDVVLHDGS 120
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
PNVGGAWAQEA SQ+ALVID+++LAT FLAPKG F+TKVFRSQDY++++YCLKQLFEKVE
Sbjct: 121 PNVGGAWAQEATSQSALVIDALRLATMFLAPKGAFITKVFRSQDYNAIMYCLKQLFEKVE 180
Query: 181 VDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRHR 240
KP ASRS SAEIY++ +KYKAPAKI P LLD+K+LF E K DV+ G K KRHR
Sbjct: 181 ATKPTASRSTSAEIYIICLKYKAPAKIQPELLDIKHLFSVVPEQTKSRDVMDGRK-KRHR 239
Query: 241 DGYEDGDTTLRKVSLATDFIWSN--NPLEILGSVTSITFGDPACSAIKDHELTTEEVKAL 298
DGYE+G+TTLRKV LA+DFIWS+ PLE LGS +I+F +P IK+HELTT+++K
Sbjct: 240 DGYEEGNTTLRKVGLASDFIWSDAQAPLEFLGSYNAISFDNPESLPIKNHELTTDDIKNF 299
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRV-LNEME 357
C+DL +L K FKH+LKWR++++KA S + + T+ A+ + EN + D+ V L EME
Sbjct: 300 CEDLLLLDKNSFKHILKWRIRLRKALSVSSQVTLKANDAV----ENTKVMDDDVLLQEME 355
Query: 358 ELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSIKGKKDLAA 417
EL +D++KKREKK L+K+RAKDKARKATGMQID DDY D +LFS+S IKG K+L A
Sbjct: 356 ELTSVIDRKKKREKKRLSKRRAKDKARKATGMQIDATGDDYGDPDLFSISVIKGGKELEA 415
Query: 418 VEYDDDDVNAAAEDSEDERPNRDTQ--EHVSSDIDSDEERRKYDEQLEEVLDQAYENYVA 475
VE + DV DSE N DTQ EH ++DSDEE+++YD QLEE+LD+AYE +V
Sbjct: 416 VESAEVDVQNEIGDSE----NEDTQAREHSDEEMDSDEEQQRYDAQLEEMLDEAYERFVT 471
Query: 476 KRGGSTMQ-RKRAKKAYAQED-QLSEGDEDEDTMHTSYDSDKDQGDLD------ANPLMV 527
++GG Q RKRAK+ D L EG ED+ D D+DQ DLD NPL++
Sbjct: 472 RKGGEIKQERKRAKRINPDADADLLEGGEDDGVAEMDQDFDEDQ-DLDEHQDQETNPLLL 530
Query: 528 PLDDGIRPTQEEITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKM 587
LD+ RPT+E+I + E E++Q ++ K+ + +V K Q++
Sbjct: 531 ALDEQ-RPTKEQIVKQMSDTEDERESLQR-NMKKMVTGKTEKVAK-----------AQRL 577
Query: 588 ANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDDS-----SSDESEDEEVDT-KAEILAC 641
D D EIVPA +D+ SD SEDE D KAE+LA
Sbjct: 578 QRD----------------DIEIVPAEPVRDEEDTSSSSGESDVSEDELDDYRKAEVLAY 621
Query: 642 AKKMLRKKQREQILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKE 701
AKKMLRKKQREQILDDAYN+YMFDD+GLP+WF+E+E+RHRQ ++PVT+EE+AAM+AQFKE
Sbjct: 622 AKKMLRKKQREQILDDAYNKYMFDDEGLPNWFVEDEKRHRQPMKPVTREEVAAMRAQFKE 681
Query: 702 IDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKR 761
IDARP+KKVAEAKARKKRVAM+KL+K R+KA+ I+DQ DI++ SKRK I+++Y+ A+P +
Sbjct: 682 IDARPSKKVAEAKARKKRVAMKKLDKARQKADAIADQNDINELSKRKMIDRIYRKAMPTK 741
Query: 762 PKKEYVVAKKGVQVRAGKGKVLVDPRMKKDSRTHGS 797
P+KEYVVAKKGVQ+R GKGKVLVDPRMKKD R G+
Sbjct: 742 PQKEYVVAKKGVQLRTGKGKVLVDPRMKKDKRASGT 777
>gi|343171936|gb|AEL98672.1| FtsJ-like methyltransferase family protein, partial [Silene
latifolia]
Length = 775
Score = 833 bits (2152), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/779 (58%), Positives = 580/779 (74%), Gaps = 53/779 (6%)
Query: 3 KVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQ 62
KV GK+RLDK+Y LAKE GYRSRAS+K++Q+D+KF L SS ++LDLCAAPGGWMQVAVQ
Sbjct: 1 KVTGKNRLDKFYHLAKEQGYRSRASFKIIQIDAKFGLLNSSRSILDLCAAPGGWMQVAVQ 60
Query: 63 RVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPN 122
R PVG+LV+G+DLV I+PIRGAVS+++DIT+P+CRA VKK++ ++G +AFD+VLHDGSPN
Sbjct: 61 RAPVGALVVGIDLVSISPIRGAVSVQEDITQPKCRATVKKLLSDNGFKAFDVVLHDGSPN 120
Query: 123 VGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVD 182
VGGAWAQEA SQN+LVIDS+KLAT FLAP+G FVTKVFRSQDY++V+YCL++ F+KVEV
Sbjct: 121 VGGAWAQEATSQNSLVIDSLKLATDFLAPRGHFVTKVFRSQDYNAVVYCLRKFFDKVEVY 180
Query: 183 KPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRHRDG 242
KP ASR +SAEIY++G+KYKAPAKIDPR+LD+KYLF+G+ EP+KV+DVL G KQKRHRDG
Sbjct: 181 KPIASRLSSAEIYVIGLKYKAPAKIDPRMLDIKYLFEGAAEPQKVIDVLDGNKQKRHRDG 240
Query: 243 YEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDL 302
YEDG T +RK+ A+DF+WS++P+E+LG+ TSI+F D A +K+H LTTEEV LCDDL
Sbjct: 241 YEDGLTLVRKIHPASDFVWSDSPVEMLGTTTSISFNDAASLPLKEHALTTEEVITLCDDL 300
Query: 303 RVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEG--ENEEDADNRVLNEMEELK 360
VLGKQDFKHLLKWR+ I+KA +S K T A +G E E+D D ++L+EMEEL
Sbjct: 301 SVLGKQDFKHLLKWRINIRKAINSTTKTTTTVEAVKENDGVDEEEKDEDEKLLDEMEELT 360
Query: 361 YAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSIKGKKDLAAVEY 420
+A+++++KREKK+ AK+ AKDKARKATGMQID MQD Y D+ELFSL SIKGK DLA V+
Sbjct: 361 HAVERKQKREKKIQAKRLAKDKARKATGMQIDAMQDGYGDNELFSLGSIKGKDDLATVDE 420
Query: 421 DDDDVNAAAEDSEDERPNRDTQEH-VSSDIDSDEERRKYDEQLEEVLDQAYENYVAKRGG 479
DD + DS+D+ N + EH SSD+DSDEER KYDE+LE++LD+AYE YV ++ G
Sbjct: 421 PDDVDLSELPDSDDDVNNNEVVEHGESSDLDSDEEREKYDEKLEKILDEAYERYVTRKDG 480
Query: 480 STMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDANPLMVPLDDGIRPTQEE 539
ST QRKRAKKAYA D L E ED D + YDSDK + D +ANPL+VP+D PTQEE
Sbjct: 481 STKQRKRAKKAYA--DDLLEDTEDVD-IAEPYDSDKVEADQEANPLVVPIDKETDPTQEE 537
Query: 540 ITNKWFSQEIFAEAVQNGDLG-----------------------------KLGSEDETQV 570
+ +WFS IF EAV+ GDLG KL ++ T+
Sbjct: 538 LRLRWFSDNIFVEAVEEGDLGRDESDDDDDDDMVVDVPKQNVSPQMKSNKKLKNQSGTKS 597
Query: 571 DK----QAEKHSIPEKAKQKMAND---------AAGPKSTHNQVSEVEGD-FEIVPAPGA 616
K +AE S P+ ++ + +D A+ T +V+ V GD E+VPAPG
Sbjct: 598 PKKSSTKAENQSGPDPKEKDLDDDVQRVIADHKASRSSKTSKKVANVVGDELEVVPAPG- 656
Query: 617 DSSDDSSSDESEDEEVDTKAEILACAKKML-RKKQREQILDDAYNRYMFDDDG--LPDWF 673
+SSD SSSD+ D + DTKAE+ A KKML K++R+++ D AYN+ MFDDD LP+WF
Sbjct: 657 NSSDSSSSDDDSDYDSDTKAELRALGKKMLGGKRKRQEMEDMAYNKRMFDDDHRVLPEWF 716
Query: 674 LEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKA 732
++ E+ H Q + VTKEE A KA+F EI+ARPAKKVAEAKARKKRVAMR LEKVRKKA
Sbjct: 717 VDYEKTHNQPPKLVTKEERLAEKARFNEINARPAKKVAEAKARKKRVAMRNLEKVRKKA 775
>gi|343171934|gb|AEL98671.1| FtsJ-like methyltransferase family protein, partial [Silene
latifolia]
Length = 775
Score = 831 bits (2147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/779 (58%), Positives = 577/779 (74%), Gaps = 53/779 (6%)
Query: 3 KVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQ 62
KV GK+RLDK+Y LAKE GYRSRAS+K++Q+D+KF L SS ++LDLCAAPGGWMQVAVQ
Sbjct: 1 KVTGKNRLDKFYHLAKEQGYRSRASFKIIQIDAKFGLLNSSRSILDLCAAPGGWMQVAVQ 60
Query: 63 RVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPN 122
R PVG+LV+G+DLV I+PIRGAVS+++DIT+P+CRA VKK++ ++G +AFDLVLHDGSPN
Sbjct: 61 RAPVGALVVGIDLVSISPIRGAVSVQEDITQPKCRATVKKLLSDNGFKAFDLVLHDGSPN 120
Query: 123 VGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVD 182
VGGAWAQEA SQN+LVIDS+KLAT FLAP+G FVTKVFRSQDY++V+YCL++ F+KVEV
Sbjct: 121 VGGAWAQEATSQNSLVIDSLKLATDFLAPRGHFVTKVFRSQDYNAVVYCLRKFFDKVEVY 180
Query: 183 KPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRHRDG 242
KP ASR +SAEIY++G+KYKAPAKIDPR+LD+KYLF+G+ EP+KV+DVL G KQKRHRDG
Sbjct: 181 KPIASRLSSAEIYVIGLKYKAPAKIDPRMLDIKYLFEGAAEPQKVIDVLDGNKQKRHRDG 240
Query: 243 YEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDL 302
YEDG T +RK+ A+DF+WS++P+E+LG+ TSI+F D A +K+H LTTEEV LCDDL
Sbjct: 241 YEDGLTLVRKIRPASDFVWSDSPVEMLGTTTSISFNDAASLPLKEHALTTEEVITLCDDL 300
Query: 303 RVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEG--ENEEDADNRVLNEMEELK 360
VLGKQDFKHLLKWR+ I+KA +S K T A +G E E+D D ++L+EMEEL
Sbjct: 301 SVLGKQDFKHLLKWRINIRKAINSTTKTTTTVEAVKENDGVDEEEKDEDEKLLDEMEELT 360
Query: 361 YAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSIKGKKDLAAVEY 420
+A+++++KREKK+ AK+ AKDKARK TGMQID MQD Y D+ELFSL SIKGK DLA V+
Sbjct: 361 HAVERKQKREKKIQAKRLAKDKARKTTGMQIDAMQDGYGDNELFSLGSIKGKDDLATVDE 420
Query: 421 DDDDVNAAAEDSEDERPNRDTQEH-VSSDIDSDEERRKYDEQLEEVLDQAYENYVAKRGG 479
DD + DS+D+ N + EH SSD+DSDEER KYDE+LE++LD+AYE YV ++ G
Sbjct: 421 PDDVDLSELPDSDDDVNNNEVVEHGESSDLDSDEEREKYDEKLEKILDEAYERYVTRKDG 480
Query: 480 STMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDANPLMVPLDDGIRPTQEE 539
ST QRKRAKKAYA D L E ED D + YDSDKD+ +ANPL+VP+D PTQEE
Sbjct: 481 STKQRKRAKKAYA--DDLLEDTEDVD-IAEPYDSDKDEAVQEANPLVVPIDKETDPTQEE 537
Query: 540 ITNKWFSQEIFAEAVQNGDLGK---------------------------------LGSED 566
+ +WFS IF EAV+ GDLG+ G++
Sbjct: 538 LRLRWFSDNIFVEAVEEGDLGRDESDDDDDDDMAVDVPKQNVSPQMKSNKNLKNQSGTKS 597
Query: 567 ETQVDKQAEKHSIPEKAKQKMAND---------AAGPKSTHNQVSEVEGD-FEIVPAPGA 616
+ +AE S P+ ++ + +D A+ T +V+ V GD E+VPAPG+
Sbjct: 598 PKKSSTKAENQSGPDPKEKDLDDDVQRVIADHKASRSSKTSKKVANVVGDELEVVPAPGS 657
Query: 617 DSSDDSSSDESEDEEVDTKAEILACAKKML-RKKQREQILDDAYNRYMFDDDG--LPDWF 673
SSD SSSD+ D + DTKAE+ A KKML K++R+++ D AYN+ MFDDD LP+WF
Sbjct: 658 -SSDSSSSDDDSDYDSDTKAELRALGKKMLGGKRKRQEMEDMAYNKRMFDDDHRVLPEWF 716
Query: 674 LEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKA 732
++ E+ H Q + VTKEE A KA+F EI+ARPAKKVAEAKARKKRVAMR LEKVRKKA
Sbjct: 717 VDYEKTHNQPPKLVTKEERLAEKARFNEINARPAKKVAEAKARKKRVAMRNLEKVRKKA 775
>gi|413946564|gb|AFW79213.1| hypothetical protein ZEAMMB73_519366 [Zea mays]
gi|413946565|gb|AFW79214.1| hypothetical protein ZEAMMB73_519366 [Zea mays]
Length = 813
Score = 831 bits (2147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/802 (57%), Positives = 603/802 (75%), Gaps = 32/802 (3%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK KGK R DK+Y LAKE GYRSRA++KL+QLD++F FL ++ +VLDLCAAPGGW+QVA
Sbjct: 1 MGKAKGKQRQDKFYHLAKEQGYRSRAAFKLLQLDARFHFLPTARSVLDLCAAPGGWVQVA 60
Query: 61 VQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
V PVG+ V+G+DLVPI PIRGA SL +DIT +CRA V+++M+ +GV AFD+VLHDGS
Sbjct: 61 VNHAPVGAFVVGVDLVPIRPIRGAHSLTEDITATKCRAAVRRLMDSNGVSAFDVVLHDGS 120
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
PNVGGAWAQEA SQ+ALVID+++LAT FLAPKG F+TKVFRSQDY++++YCLKQLFEKVE
Sbjct: 121 PNVGGAWAQEATSQSALVIDALRLATMFLAPKGAFITKVFRSQDYNAIMYCLKQLFEKVE 180
Query: 181 VDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRHR 240
KP ASRS SAEIY++ +KYKAPAKI P LLD+K+LF E K DVL G K KRHR
Sbjct: 181 ATKPTASRSTSAEIYIICLKYKAPAKIQPELLDIKHLFSVVPEQTKSRDVLDGRK-KRHR 239
Query: 241 DGYEDGDTTLRKVSLATDFIWSNN--PLEILGSVTSITFGDPACSAIKDHELTTEEVKAL 298
DGYE+G+TTLRKV LA+DFIWS+ PLE LGS +I+F +P IK+HELTT+++K
Sbjct: 240 DGYEEGNTTLRKVGLASDFIWSDTQAPLEFLGSYNAISFDNPESLPIKNHELTTDDIKNF 299
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEE 358
C+DL +L K FKH+LKWR++++K+ S++ + T + + + ++D +L EMEE
Sbjct: 300 CEDLLLLDKHSFKHILKWRIRLRKSLSASSQVTPKVNDAVESTKVMDDDV---LLQEMEE 356
Query: 359 LKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSIKGKKDLAAV 418
L +D++KKREKK L+K+RAKDKARKATGMQ+D DDY D +LFS+S IKG K+L AV
Sbjct: 357 LTSVIDRKKKREKKRLSKRRAKDKARKATGMQVDATGDDYGDPDLFSISVIKGGKELEAV 416
Query: 419 EYDDDDVNAAAEDSEDERPNRDTQ--EHVSSDIDSDEERRKYDEQLEEVLDQAYENYVAK 476
E + DV ED + N DTQ E ++DSD+E+++YD QLEE+LD+AYE +V K
Sbjct: 417 ESAEIDV----EDEIGDGDNEDTQALEDSDEEMDSDDEQQRYDAQLEEMLDEAYERFVTK 472
Query: 477 RGGSTMQ-RKRAKKAYAQED-QLSEGDEDEDTMHTSYDSDKDQGDLDANPLMVPLDDGIR 534
+GG Q RKRAK+ D +L EG ED+ + D D+DQ +ANPL+ LD+ +
Sbjct: 473 KGGEIKQERKRAKRINPDADAELLEGGEDDGDVEMDQDFDEDQDQ-EANPLLFALDEQ-K 530
Query: 535 PTQEEITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKMANDAAGP 594
PT+E+I +W+SQ++F EA G + +EDE ++ ++ +K ++ K A D
Sbjct: 531 PTKEQIVKQWYSQDVFTEAA-TGVTERSDTEDEREILQRNKKMDTGKREKVAKAQDL--- 586
Query: 595 KSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDT---KAEILACAKKMLRKKQR 651
H+ FEIVPA + +DSSS E E+ KAE+LA AKKMLRKKQR
Sbjct: 587 --QHD-------GFEIVPAEPVQNEEDSSSSSDESEDDIDDYRKAEVLAYAKKMLRKKQR 637
Query: 652 EQILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVA 711
EQILDDAYN++MFDD+GLP+WF+E+E+RHRQ ++PV++EE+AAM+AQFKEIDARP+KKVA
Sbjct: 638 EQILDDAYNKHMFDDEGLPNWFVEDEKRHRQPMKPVSREEVAAMRAQFKEIDARPSKKVA 697
Query: 712 EAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKEYVVAKK 771
EAKARKKRVAM+KL+K R+KA+ I+DQ DI++ SKRK I+++Y+ A+PK+P+KEYVVAKK
Sbjct: 698 EAKARKKRVAMKKLDKARQKADAIADQNDINELSKRKMIDRIYRKAMPKKPQKEYVVAKK 757
Query: 772 GVQVRAGKGKVLVDPRMKKDSR 793
GVQVRAGKGKVLVDPRMKKD R
Sbjct: 758 GVQVRAGKGKVLVDPRMKKDKR 779
>gi|357132494|ref|XP_003567865.1| PREDICTED: adoMet-dependent rRNA methyltransferase spb1-like
[Brachypodium distachyon]
Length = 847
Score = 828 bits (2140), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/815 (56%), Positives = 594/815 (72%), Gaps = 29/815 (3%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK KGK R DK+Y LAKE GYRSRA++KL+QLD+++ FL ++ AVLDLCAAPGGW+QVA
Sbjct: 1 MGKAKGKQRQDKFYHLAKEQGYRSRAAFKLLQLDARYRFLPTARAVLDLCAAPGGWVQVA 60
Query: 61 VQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
V PVG+ V+G+DLVPI PIRGA SL +DIT +CR+ ++K+M+ GV AFD+VLHDGS
Sbjct: 61 VNHAPVGAFVVGVDLVPIRPIRGAHSLTEDITTTKCRSSIRKLMDSKGVGAFDVVLHDGS 120
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
PNVGGAWAQEA +Q+ALVIDSV+LAT FLAPKGTFVTKVFRSQDY+++++CLKQLFEKVE
Sbjct: 121 PNVGGAWAQEATTQSALVIDSVRLATMFLAPKGTFVTKVFRSQDYNAIMFCLKQLFEKVE 180
Query: 181 VDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVV--DVLRGTKQKR 238
KP ASRS SAEIY++ KYKAPAKI P LLD+K+LF SV+ K V D+ K+KR
Sbjct: 181 ATKPTASRSTSAEIYIICQKYKAPAKIQPELLDIKHLF--SVDEEKSVPRDITNPGKKKR 238
Query: 239 HRDGYEDGDTTLRKVSLATDFIWS--NNPLEILGSVTSITFGDPACSAIKDHELTTEEVK 296
R GY +G+T L K LA+DFIWS P+E LGS +I+F DPA IK+HELTTEE+K
Sbjct: 239 ERSGYGEGETVLGKAGLASDFIWSEAQTPIEFLGSFGAISFEDPASLPIKNHELTTEEIK 298
Query: 297 ALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEM 356
LC+DL VL K FKH+LKWR++I+KA S++ + T A T + + D+++L EM
Sbjct: 299 HLCEDLYVLDKNSFKHILKWRIRIRKALSASSQVTPKADG---TTLDAKVKDDDQLLQEM 355
Query: 357 EELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSIKGKKDLA 416
EEL +D++K+REKK L+++RAKDKARKATGMQID +D Y D +LFS+ +IKG K L
Sbjct: 356 EELTSVIDRKKRREKKRLSRRRAKDKARKATGMQIDATEDGYCDPDLFSIDAIKGGKGLQ 415
Query: 417 AVEYDDDDVNAAAEDSEDERPNRDTQEHVSSD--IDSDEERRKYDEQLEEVLDQAYENYV 474
A+E + +V + DSEDE +TQ H SD +DSDEE+++YD QLEE+LD+AYE +V
Sbjct: 416 ALESTELNVEDSIGDSEDE----ETQTHEDSDEEMDSDEEQQRYDAQLEEMLDEAYERFV 471
Query: 475 AKRGGSTMQ-RKRAKKAYAQEDQLSEGDEDEDTMHTSYD---SDKDQGDLDANPLMVPLD 530
K+GG Q RKRAK+ D ++D D + D D NPL++ LD
Sbjct: 472 TKKGGEVKQERKRAKRINTDADAELLEGGEDDGDDVDMDQVSDEDQDQDEDTNPLLLSLD 531
Query: 531 DGIRPTQEEITNKWFSQEIFAEAVQNGDLGKLGSEDETQ-VDKQAEKHSIPEKAKQKMAN 589
+PT+E+I +W+SQ++F EA G + SE+E + K +K ++ + K
Sbjct: 532 TE-KPTKEQIVKQWYSQDVFTEAGAGGLTEQSDSENEREKPRKNLKKMDSGKEMRAKAQM 590
Query: 590 DAAGPKSTHNQVSEVEGDFEIVPAPGADS-------SDDSSSDESEDEEVDTKAEILACA 642
D+ + E +FEIV A + SDDS + ED + DTKAE+LA A
Sbjct: 591 DSGKKEKLAKAQRSQEDEFEIVRAEPVRTEEDSSSSSDDSDDEPEEDLDDDTKAEVLAYA 650
Query: 643 KKMLRKKQREQILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEI 702
KMLRKKQREQILDDAYN+YMFDD GLP WF+E+E+RH Q ++P+T+EE+AAMKAQF+EI
Sbjct: 651 HKMLRKKQREQILDDAYNKYMFDDVGLPKWFVEDEKRHTQPMKPITREEVAAMKAQFREI 710
Query: 703 DARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAV-PKR 761
DARP+KKVAEAKARKKRVAM+KLEK R+KA++++DQ+DI+++SK K I+++YK AV ++
Sbjct: 711 DARPSKKVAEAKARKKRVAMKKLEKARQKADIVADQSDINEKSKAKMIDKIYKKAVTTQK 770
Query: 762 PKKEYVVAKKGVQVRAGKGKVLVDPRMKKDSRTHG 796
PKKEYVVAKKGVQVRAGKGKVLVDPRMKKD RT G
Sbjct: 771 PKKEYVVAKKGVQVRAGKGKVLVDPRMKKDKRTSG 805
>gi|297744408|emb|CBI37670.3| unnamed protein product [Vitis vinifera]
Length = 593
Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/564 (73%), Positives = 481/564 (85%), Gaps = 10/564 (1%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGKVKGKHRLDK+Y LAKEHGYRSRA+WKLVQLDSK++FLRSS AVLDLCAAPGGWMQ A
Sbjct: 1 MGKVKGKHRLDKFYHLAKEHGYRSRAAWKLVQLDSKYNFLRSSRAVLDLCAAPGGWMQAA 60
Query: 61 VQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
V+RVPVGS +LG+DL PIAP+RGA+S+E+DITKP C+ARVKK+M E+G AFD+VLHDGS
Sbjct: 61 VERVPVGSFILGVDLNPIAPVRGAISIEEDITKPACKARVKKLMSEYGCAAFDIVLHDGS 120
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
PN+GGAW QEA +QNALVID+++LATQFLAPKG FVTKVFRSQDY+SVLYCLKQLFEKVE
Sbjct: 121 PNIGGAWTQEATAQNALVIDALRLATQFLAPKGAFVTKVFRSQDYNSVLYCLKQLFEKVE 180
Query: 181 VDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRHR 240
VDKPAASRS SAEI++LG+KYKAPAKIDPRLLDVK+LFQG++EPRKVVDVLRGTKQKRHR
Sbjct: 181 VDKPAASRSTSAEIFVLGLKYKAPAKIDPRLLDVKHLFQGTIEPRKVVDVLRGTKQKRHR 240
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
DGYEDGDTTLRKVS AT+FIWS+ PLEILGSVTSI+F DPA IKDH LTTEEVK LCD
Sbjct: 241 DGYEDGDTTLRKVSSATNFIWSDTPLEILGSVTSISFDDPASLPIKDHALTTEEVKTLCD 300
Query: 301 DLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEELK 360
DLRVLGKQDFKHLLKWRM ++KA S +KAT S +A + E D D R+LNEMEEL
Sbjct: 301 DLRVLGKQDFKHLLKWRMHVRKALSPVQKAT---STAAEDDHEKVVDEDERMLNEMEELT 357
Query: 361 YAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSIKGKKDLAAV-- 418
YAM+++KKR KKLLAK++AKDKARK TGMQ+D +++ YTDHELFSLSSIK KKDL AV
Sbjct: 358 YAMERKKKRTKKLLAKRQAKDKARKVTGMQVDALEEGYTDHELFSLSSIKAKKDLLAVNS 417
Query: 419 -EYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENYVAKR 477
EYD+ D DSEDER +TQEH +SD+DSDEERR+YDEQ+EE+LDQ YE +VA+R
Sbjct: 418 TEYDEGD---GVVDSEDERTREETQEHSASDMDSDEERRRYDEQMEEMLDQVYEQFVARR 474
Query: 478 GGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDANPLMVPLDDGIRPTQ 537
GST QRKRA+K ++++D L +GD+D D+D +Q DL+ANPLMVPL PTQ
Sbjct: 475 EGSTKQRKRARKKHSEDDLLEDGDDDIIHSDHDSDND-NQADLEANPLMVPLHGEEMPTQ 533
Query: 538 EEITNKWFSQEIFAEAVQNGDLGK 561
EIT+KWFSQ+IFAEA + GDLGK
Sbjct: 534 REITDKWFSQDIFAEAAEEGDLGK 557
>gi|51854285|gb|AAU10666.1| unknown protein [Oryza sativa Japonica Group]
Length = 749
Score = 763 bits (1970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/730 (57%), Positives = 544/730 (74%), Gaps = 30/730 (4%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK KGK R DK+Y LAKE GYRSRA++KL+QLD++F FL ++ AVLDLCAAPGGW+QVA
Sbjct: 1 MGKTKGKQRQDKFYHLAKEQGYRSRAAFKLLQLDARFRFLPTARAVLDLCAAPGGWVQVA 60
Query: 61 VQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
V PVG+ V+G+DLVPI PIRGA SL +DIT +CRA V+++M+ +GV AFD+VLHDGS
Sbjct: 61 VNHAPVGAFVVGVDLVPIRPIRGAHSLTEDITTTKCRAAVRRLMDSNGVAAFDVVLHDGS 120
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
PNVGGAWAQEA +Q++LVID+V+LAT FLAPKG F+TKVFRSQDY++++YCLKQLFEKVE
Sbjct: 121 PNVGGAWAQEATAQSSLVIDAVRLATMFLAPKGAFITKVFRSQDYNAIMYCLKQLFEKVE 180
Query: 181 VDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRHR 240
V KP ASRS SAEIY++ ++YKAPAKI P LLD+K+LF +P+KV D L+ +QKR+R
Sbjct: 181 VTKPTASRSTSAEIYIICLRYKAPAKIQPELLDIKHLFSVDPDPKKVRDPLKPDRQKRNR 240
Query: 241 DGYEDGDTTLRKVSLATDFIWS--NNPLEILGSVTSITFGDPACSAIKDHELTTEEVKAL 298
DGYE+G+TTLRKV LA+DFIWS PLE LGS +I+F DPA IK+HELTT+E+KAL
Sbjct: 241 DGYEEGNTTLRKVGLASDFIWSEGQTPLEFLGSFNAISFDDPASLPIKNHELTTDEIKAL 300
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEE 358
C+DL VL K FKH+LKWR++I+KA SS+E + T E D+++L EMEE
Sbjct: 301 CEDLYVLDKNSFKHILKWRIRIRKALSSSE----VTKKTDDTAVEVNVKDDDQLLQEMEE 356
Query: 359 LKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSIKGKKDLAAV 418
L +D++KKREKK +K+RAKDKARKATGMQID D+Y D +LFS+S+IKG K+L A+
Sbjct: 357 LTSVIDRKKKREKKRQSKRRAKDKARKATGMQIDATGDNYGDPDLFSISAIKGGKELQAI 416
Query: 419 EYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENYVAKRG 478
E + +V A DSE+E + T+E+ ++DSDEE+++YD QLEE+LD+AYE YV K+G
Sbjct: 417 ESAELNVEDAQGDSENE--DIQTREYSDEEMDSDEEQQRYDAQLEEMLDEAYERYVTKKG 474
Query: 479 GSTMQ-RKRAKKAY--AQEDQLSEGDEDEDTMHTSYDSDKDQGDLDANPLMVPLDDGIRP 535
G Q RKRAK+ A E+ L G++D D + SD++Q D + NPL++ L D +P
Sbjct: 475 GEVKQERKRAKRVNTDADEELLEGGEDDGDDVDMDQGSDEEQ-DQETNPLLLSL-DAEKP 532
Query: 536 TQEEITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKMANDAAGPK 595
T+E++ +WFSQ++F EA G + + SEDE + + K K+K A K
Sbjct: 533 TKEQMMEQWFSQDVFTEA-GTGVVEQSDSEDEREQLTRIAKKKADSGKKEKSA------K 585
Query: 596 STHNQVSEVEGDFEIVPAPGADS------SDDSSSDESEDEEVDTKAEILACAKKMLRKK 649
+ H Q + DFEIVPA + S D S + ED + DTKAE+LA A+KMLRKK
Sbjct: 586 AKHLQ----QDDFEIVPAEPVRTEDDSSSSSDESDELDEDLDDDTKAEVLAYARKMLRKK 641
Query: 650 QREQILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKK 709
QREQILDDAYN+YMFDD+GLP WF E+E+RH Q ++PVTKEE+AAM+AQFKEIDARPAKK
Sbjct: 642 QREQILDDAYNKYMFDDEGLPKWFAEDEKRHNQPMKPVTKEEVAAMRAQFKEIDARPAKK 701
Query: 710 VAEAKARKKR 719
VAEAKARKKR
Sbjct: 702 VAEAKARKKR 711
>gi|302758118|ref|XP_002962482.1| hypothetical protein SELMODRAFT_141188 [Selaginella moellendorffii]
gi|302758956|ref|XP_002962901.1| hypothetical protein SELMODRAFT_78506 [Selaginella moellendorffii]
gi|300169343|gb|EFJ35945.1| hypothetical protein SELMODRAFT_141188 [Selaginella moellendorffii]
gi|300169762|gb|EFJ36364.1| hypothetical protein SELMODRAFT_78506 [Selaginella moellendorffii]
Length = 830
Score = 760 bits (1963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/809 (53%), Positives = 579/809 (71%), Gaps = 42/809 (5%)
Query: 1 MGKVK-GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQV 59
MGK K GKHRLD++Y LAKE GYRSRA++KLVQLD K+ FL S+H+VLDLCAAPGGWMQV
Sbjct: 1 MGKAKKGKHRLDRFYYLAKEQGYRSRAAFKLVQLDRKYGFLSSAHSVLDLCAAPGGWMQV 60
Query: 60 AVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDG 119
AV+++PV S+V+G+DLVPI P+RGA+SL+ DIT P+C + + K+++++G+R D+VLHDG
Sbjct: 61 AVEKMPVRSVVIGVDLVPIRPVRGALSLQGDITTPKCASDIGKILDQNGLRMVDVVLHDG 120
Query: 120 SPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKV 179
SPNVGGAWA+EAM+Q++LV+DS+KLAT+FLAPKGTFVTKVFRSQDY+++ Y +QLF KV
Sbjct: 121 SPNVGGAWAKEAMTQSSLVLDSLKLATKFLAPKGTFVTKVFRSQDYNALKYAFEQLFAKV 180
Query: 180 EVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRH 239
EV KP ASRS SAEIY++G+KY AP KIDPR LD ++LF+ +P KV+DVLR +KQKRH
Sbjct: 181 EVTKPIASRSTSAEIYVVGLKYLAPVKIDPRNLDPRFLFEEIPQPPKVIDVLRSSKQKRH 240
Query: 240 RDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALC 299
R+GY+D +TT RK A DF+WS PLE+LGS+TSI+F DP S IKDH TT+E+KALC
Sbjct: 241 REGYDDANTTFRKDCTAADFVWSEKPLELLGSITSISFEDPKSSPIKDHAETTDEIKALC 300
Query: 300 DDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNR-------- 351
+DLRVLGK++FK LLKW + ++KA S SAS TEG+ + D+
Sbjct: 301 EDLRVLGKKEFKQLLKWCLHVRKALSKT-------SASEETEGDKAAEKDDDEKEDEDED 353
Query: 352 VLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSIKG 411
+L +MEELK MD + K+ KK AK++ K AR TGMQ+DV+ D Y + +LFSL SIK
Sbjct: 354 MLKKMEELKSLMDSKSKQAKKKAAKRKQKLNARNRTGMQVDVLGDTYGERDLFSLGSIKA 413
Query: 412 KKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDE--ERRKYDEQLEEVLDQA 469
KK L VE DDD+ + ++ +DE +D + D D D ER +Y+++LE LD+A
Sbjct: 414 KKSLDRVEDADDDMLDSDDNVKDETSKQDMERKDDEDNDVDSDVERERYNDELESFLDRA 473
Query: 470 YENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDANPLMVPL 529
YE Y +K +T +RKRA+ A A +++L E D +E+ + +++ + +ANPL+V L
Sbjct: 474 YERYRSKTESNTARRKRARMANAGDEKLWEEDVEENASEEEENEVEEEEEEEANPLVVSL 533
Query: 530 DDGIRPTQEEITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKMAN 589
+ ++E+I +WFSQ+IFA Q E +T DK A K + P ++
Sbjct: 534 PKA-KLSKEQIAQQWFSQDIFAGLDQT-------PETDTNKDKTA-KDAPP-------SD 577
Query: 590 DAAGPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRKK 649
P ++ DFE+V A S DSSSDE ED + D KAEIL AKKMLRKK
Sbjct: 578 VTVAP----GKLKRAREDFEVVAAE-PSGSSDSSSDEEEDYDSDAKAEILTYAKKMLRKK 632
Query: 650 QREQILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKK 709
R++I+DDAYN+YMFDD+GLP+WF ++E+RH + +P TKEE+ AM+AQF+ IDARP KK
Sbjct: 633 DRDRIIDDAYNKYMFDDEGLPEWFADDEKRHCKIQKPFTKEEVQAMRAQFRAIDARPVKK 692
Query: 710 VAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVP---KRPKKEY 766
VAEAKARKKR M+K+E+ R +A I+DQ DIS++SK + ++++YK A KRPK+E
Sbjct: 693 VAEAKARKKRRVMKKMEQARSRAAAIADQPDISNKSKNRMMDKVYKKAAATTNKRPKREL 752
Query: 767 VVAKKGVQVRAGKGKVLVDPRMKKDSRTH 795
VVAKKGV+V+ GKGK++VD RMKKDSR+
Sbjct: 753 VVAKKGVRVKGGKGKLVVDRRMKKDSRSR 781
>gi|168007294|ref|XP_001756343.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692382|gb|EDQ78739.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 844
Score = 754 bits (1948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/873 (49%), Positives = 592/873 (67%), Gaps = 71/873 (8%)
Query: 1 MGKVK--GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQ 58
MGK K GK RLD++Y LAKE G+RSRAS+KLVQLD KF FL S+ +VLDLCAAPGGWMQ
Sbjct: 1 MGKSKTTGKGRLDRFYYLAKEQGFRSRASFKLVQLDRKFQFLSSARSVLDLCAAPGGWMQ 60
Query: 59 VAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
V + +PVGSL++G+DLVPI PIRG V+L++DIT P+CRA +KKV++E +VLHD
Sbjct: 61 VCSKNMPVGSLIIGIDLVPIRPIRGCVTLQEDITTPQCRAAIKKVLKEKKHDMVQVVLHD 120
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
GSPNVGGAW+ E+ +Q ALV+DS+KLAT L P GTFVTK+FRSQDY+++L+ KQLFEK
Sbjct: 121 GSPNVGGAWSSESSAQTALVLDSLKLATDVLCPGGTFVTKIFRSQDYNALLFAFKQLFEK 180
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKR 238
VEV KP ASR+ SAEIY++ KY+APAKIDPRLLD K+LF+ ++E KV+DV++ +KQKR
Sbjct: 181 VEVTKPIASRATSAEIYVICQKYRAPAKIDPRLLDAKHLFKETIEAPKVIDVMKASKQKR 240
Query: 239 HRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKAL 298
HR+GYE+G T LRK A+DF+WS PL++LGS+TS++F DP C IK+H+LTT+E+K L
Sbjct: 241 HREGYEEGTTVLRKEVKASDFVWSEKPLDMLGSITSMSFKDPDCKVIKEHDLTTDEIKIL 300
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEE 358
C+DLRVLGK +FK LLKWR+QI+K + ++ +G +E++ D L MEE
Sbjct: 301 CEDLRVLGKTEFKQLLKWRLQIRKNLEPTPASDKEDDSNEKKKGSDEDNDDEEELATMEE 360
Query: 359 LKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSIKGKKDLAAV 418
LK ++ +K++E+K AK + K KAR ATGMQIDVM+D D ELF++ +IKGKKDLA +
Sbjct: 361 LKEYVESQKRKERKKKAKAKEKAKARSATGMQIDVMEDGVADTELFNIKAIKGKKDLARM 420
Query: 419 EYDDDD---------VNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQA 469
E +DD+ +N + +ED+ SD D +++R++YD++L++ ++A
Sbjct: 421 EVEDDEDDNDSVDEMLNDGPQQAEDD-----------SDFDPEQDRQRYDQELDQYFERA 469
Query: 470 YENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDL-------DA 522
Y Y + GST +R+RAK A GD ED T D + D D+ +A
Sbjct: 470 YSKYCSTTDGSTKRRRRAKLGEA-------GDLWEDNEVTGQDDESDGDDVIENADEDEA 522
Query: 523 NPLMVPLDDGIRPTQEEITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEK 582
NPL+VPL + + + + ++ +WFSQ++F + +L S+DE + K +K K
Sbjct: 523 NPLVVPLAEAPKLSTDHLSKQWFSQDVFDGVGEGEEL----SDDEEAIAKMRKKR----K 574
Query: 583 AKQKMANDAAG-----------PKSTH--NQVSEV-----EGDFEIVPAPGADSSDDSSS 624
A+ DA G P + H N + + +GDFEI P G + SS
Sbjct: 575 AETDAEVDADGDEDMGVGASELPAANHSANGAASLAPAVGKGDFEIAPQEG----NSSSD 630
Query: 625 DESEDEEVDTKAEILACAKKMLRKKQREQILDDAYNRYMFDDDGLPDWFLEEERRHRQAI 684
+S+ E+ + KAEILA AKKML+KK RE ILDDAYNRY F+D+ +P WF ++E++H +
Sbjct: 631 SDSDSEDDNGKAEILAYAKKMLKKKNRESILDDAYNRYTFNDEDMPRWFADDEKKHNRPE 690
Query: 685 RPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDR 744
+P+TKEE+ AMKAQF+EI+ARP KKVAEAKARKKR ++KLE+ R+KA I+DQ DIS++
Sbjct: 691 KPITKEEVEAMKAQFREINARPVKKVAEAKARKKRRVLKKLEQARQKATAIADQEDISNK 750
Query: 745 SKRKQIEQLYKSAV--PKRPKKEYVVAKKGVQVRAGKGKVLVDPRMKKDSR---THGSGK 799
SK+K +E++YK A+ PKR K E VVAKKGV R GKG+++VD R++KDSR T GK
Sbjct: 751 SKQKSMERVYKKALAAPKRGKTEVVVAKKGVGARGGKGRIVVDRRLRKDSRAKNTGKPGK 810
Query: 800 ARKGGSKKGNIGKARKGKGSVKASSKKGKKGNK 832
KG N KA+ KG + KG+K K
Sbjct: 811 GFKGRGGGANGAKAKANKGKGPSRGGKGRKPQK 843
>gi|218197285|gb|EEC79712.1| hypothetical protein OsI_21019 [Oryza sativa Indica Group]
Length = 868
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/804 (52%), Positives = 540/804 (67%), Gaps = 117/804 (14%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK KGK R DK+Y LAKE GYRSRA++KL+QLD++F FL ++ AVLDLCAAPGGW+QVA
Sbjct: 1 MGKTKGKQRQDKFYHLAKEQGYRSRAAFKLLQLDARFRFLPTARAVLDLCAAPGGWVQVA 60
Query: 61 VQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
V PVG+ V+G+DLVPI PIRGA SL +DIT +CRA V+++M+ +GV AFD+VLHDGS
Sbjct: 61 VNHAPVGAFVVGVDLVPIRPIRGAHSLTEDITTTKCRAAVRRLMDSNGVAAFDVVLHDGS 120
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
PNVGGAWAQEA +Q++LVID+V+LAT FLAPKG F+TKVFRSQDY++++YCLK
Sbjct: 121 PNVGGAWAQEATAQSSLVIDAVRLATMFLAPKGAFITKVFRSQDYNAIMYCLK------- 173
Query: 181 VDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRHR 240
+V D L+ +QKR+R
Sbjct: 174 ---------------------------------------------QVRDPLKPDRQKRNR 188
Query: 241 DGYEDGDTTLRKVSLATDFIWS--NNPLEILGSVTSITFGDPACSAIKDHELTTEEVKAL 298
DGYE+G+TTLRK LA+DFIWS PLE LGS +I+F DPA IK+HELTT+E+KAL
Sbjct: 189 DGYEEGNTTLRKAGLASDFIWSEGQTPLEFLGSFNAISFDDPASLPIKNHELTTDEIKAL 248
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEE 358
C+DL VL K FKH+LKWR++I+KA SS+E + T E D+++L EMEE
Sbjct: 249 CEDLYVLDKNSFKHILKWRIRIRKALSSSE----VTKKTDDTAVEVNVKDDDQLLQEMEE 304
Query: 359 LKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSIKGKKDLAAV 418
L +D++KKREKK +K+RAKDKARKATGMQID D+Y D +LFS+S+IKG K+L A+
Sbjct: 305 LTSVIDRKKKREKKRQSKRRAKDKARKATGMQIDATGDNYGDPDLFSISAIKGGKELQAI 364
Query: 419 EYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENYVAKRG 478
E + +V A D+ YE YV K+G
Sbjct: 365 ESAELNVEDAQGDT-------------------------------------YERYVTKKG 387
Query: 479 GSTMQ-RKRAKKAY--AQEDQLSEGDEDEDTMHTSYDSDKDQGDLDANPLMVPLDDGIRP 535
G Q RKRAK+ A E+ L G++D D + SD++Q D + NPL++ LD +P
Sbjct: 388 GEVKQERKRAKRVNTDADEELLEGGEDDGDDVDMDQGSDEEQ-DQETNPLLLSLD-AEKP 445
Query: 536 TQEEITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKMANDAAGPK 595
T+E++ +WFSQ++F EA G+ Q D + E+ + AK+K A+ K
Sbjct: 446 TKEQMMEQWFSQDVFTEA---------GTGVVEQSDSEDEREQLTRIAKKK-ADSGKKEK 495
Query: 596 STHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVD------TKAEILACAKKMLRKK 649
S + + + DFEIVPA + DDSS E +E+D TKAE+LA A+KMLRKK
Sbjct: 496 SAKAKRLQ-QDDFEIVPAEPVRTEDDSSPSSDESDELDEDLDDDTKAEVLAYARKMLRKK 554
Query: 650 QREQILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKK 709
QREQILDDAYN+YMFDD+GLP WF E+E+RH Q ++PVTKEE+AAM+AQFKEIDARPAKK
Sbjct: 555 QREQILDDAYNKYMFDDEGLPKWFAEDEKRHNQPMKPVTKEEVAAMRAQFKEIDARPAKK 614
Query: 710 VAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKEYVVA 769
VAEAKARKKRVAM+KL+K R+KA+ I+DQ DI+++SKRK I+++YK A+PK+P+KEYVVA
Sbjct: 615 VAEAKARKKRVAMKKLDKARQKADAIADQNDINEQSKRKMIDRIYKKAIPKKPQKEYVVA 674
Query: 770 KKGVQVRAGKGKVLVDPRMKKDSR 793
KKGVQVRAGKGK+LVD RMKKD R
Sbjct: 675 KKGVQVRAGKGKILVDKRMKKDKR 698
>gi|302758756|ref|XP_002962801.1| hypothetical protein SELMODRAFT_404107 [Selaginella moellendorffii]
gi|300169662|gb|EFJ36264.1| hypothetical protein SELMODRAFT_404107 [Selaginella moellendorffii]
Length = 814
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/817 (50%), Positives = 554/817 (67%), Gaps = 74/817 (9%)
Query: 1 MGKVK-GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQV 59
MGK K GKHRLD++Y LAKE GYRSRA++KLVQLD K+ FL S+H+VLDLCAAPGGWMQV
Sbjct: 1 MGKAKKGKHRLDRFYYLAKEQGYRSRAAFKLVQLDRKYGFLSSAHSVLDLCAAPGGWMQV 60
Query: 60 AVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDG 119
AV+++PV S+++G+DLVPI P+RGA+SL+ DIT P+C + + K+++++G+R D+VLHDG
Sbjct: 61 AVEKMPVRSVIIGVDLVPIRPVRGALSLQGDITTPKCASDIGKILDQNGLRMVDVVLHDG 120
Query: 120 SPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKV 179
SPNVGGAWA+EAM+Q++LV+DS+KLAT+FLAPKGTFVTKVFRSQDY+++ Y +QLF KV
Sbjct: 121 SPNVGGAWAKEAMTQSSLVLDSLKLATKFLAPKGTFVTKVFRSQDYNALKYAFEQLFAKV 180
Query: 180 EVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKV-------VDVLR 232
EV KP ASRS SAEIY++G+KY AP KIDPR LD ++LF+ +P KV V L+
Sbjct: 181 EVTKPIASRSTSAEIYVVGLKYLAPVKIDPRNLDPRFLFEEIPQPPKVGFGIVNKVLALK 240
Query: 233 GTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTT 292
+K R Y+D +TT RK A DF+WS PLE+LGS+TSI+F DP S IKDH TT
Sbjct: 241 PSKLCR----YDDANTTFRKDCTAADFVWSEKPLELLGSITSISFEDPKSSPIKDHAETT 296
Query: 293 EEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGEN-------- 344
+E+KALC+DLRVLGK++FK LLKW + ++KA S SAS TEG+
Sbjct: 297 DEIKALCEDLRVLGKKEFKQLLKWCLHVRKALSKT-------SASEETEGDRAPEKDDDE 349
Query: 345 -EEDADNRVLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHEL 403
EED D +L +MEELK MD + K+ KK AK++ K AR TGMQ+DV+ D Y + +L
Sbjct: 350 KEEDEDEDMLKKMEELKSLMDSKSKQAKKKAAKRKQKLNARNRTGMQVDVLGDTYGERDL 409
Query: 404 FSLSSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDE--ERRKYDEQ 461
FSL SIK KK L VE DDD+ + ++ +DE +D ++ D D D ER +Y+++
Sbjct: 410 FSLGSIKAKKSLDRVEGADDDMLDSDDNVKDETSKQDMEQKDDEDNDVDSDVERERYNDE 469
Query: 462 LEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLD 521
LE LD+AYE Y +K +T +RKRA+ A A +++L E D +E+ + +++ + +
Sbjct: 470 LESFLDRAYERYRSKTESNTARRKRARMANAGDEKLWEEDVEENASEEEENEVEEEEEEE 529
Query: 522 ANPLMVPLDDGIRPTQEEITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPE 581
ANPL+V L + ++E+I +WFSQ+IFA G + + D + P+
Sbjct: 530 ANPLVVSLPKA-KLSKEQIAQQWFSQDIFA-----------GLDQTPETDTKG-----PK 572
Query: 582 KAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILAC 641
AK +D ++ DFE+V A S DSSSDE ED + D KAEIL
Sbjct: 573 TAKDAPPSDVT---VAPGKLKRAREDFEVVAAE-PSGSSDSSSDEEEDYDSDAKAEILTY 628
Query: 642 AKKMLRKKQREQILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKE 701
AKKMLRKK R++I+DDAYN+YMFDD+GLP+WF ++E+RH RPV
Sbjct: 629 AKKMLRKKDRDRIIDDAYNKYMFDDEGLPEWFADDEKRHSPRKRPV-------------- 674
Query: 702 IDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVP-- 759
KKVAEAKARKKR M+K+E+ R KA I+DQ DIS++SK + ++++YK A
Sbjct: 675 ------KKVAEAKARKKRRVMKKMEQARSKAAAIADQPDISNKSKNRMMDKVYKKAAATT 728
Query: 760 -KRPKKEYVVAKKGVQVRAGKGKVLVDPRMKKDSRTH 795
KRPK+E VVAKKGV+V+ GKGK++VD RMKKDSR+
Sbjct: 729 NKRPKRELVVAKKGVRVKGGKGKLVVDRRMKKDSRSR 765
>gi|449507363|ref|XP_004163010.1| PREDICTED: adoMet-dependent rRNA methyltransferase spb1-like,
partial [Cucumis sativus]
Length = 615
Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/618 (62%), Positives = 474/618 (76%), Gaps = 31/618 (5%)
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
D YEDG TTLRKVS A++FIWS++PLE+LG+VT I F DP IKDH+LTTEEVKALCD
Sbjct: 3 DRYEDGATTLRKVSSASNFIWSDSPLEVLGTVTCIAFDDPDSLPIKDHDLTTEEVKALCD 62
Query: 301 DLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEELK 360
DLRVLGKQDFKHLLKWR+ I+KA S +K T + A E E ++D D+++LNEMEEL
Sbjct: 63 DLRVLGKQDFKHLLKWRLHIRKALSPDQKPTSTSVKDA--ENEVKQDEDDKLLNEMEELA 120
Query: 361 YAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSIKGKKDLAAV-- 418
YAM+++KKR KKLLAK++AKDKARKA G Q+DVM++ Y DHELFSLS+IKGK DL AV
Sbjct: 121 YAMERKKKRAKKLLAKRKAKDKARKAMGTQLDVMEEGYVDHELFSLSNIKGKNDLRAVDS 180
Query: 419 -EYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENYVAKR 477
EYDDD+V + E++ + +SDIDSDEERR+YDE +EE+LDQAYE++V+++
Sbjct: 181 TEYDDDNVELG--EHENDVTKDKNRGSSASDIDSDEERRRYDEHMEELLDQAYESFVSRK 238
Query: 478 GGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDANPLMVPLDDGIRPTQ 537
GS +RKR K AY+ +L E + D + + YDSD++ D D NPLMV LDDG PTQ
Sbjct: 239 EGSAKRRKRVKNAYSDNAELLEDENGGDGIQSDYDSDENIVDADKNPLMVSLDDGAEPTQ 298
Query: 538 EEITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKMANDAAGPKS- 596
EEI +KWFSQ+IFAEA + GDL +L S+D+ +VD E ++ +KAK ++ +A G KS
Sbjct: 299 EEIASKWFSQDIFAEAAEEGDLKRLDSDDDMEVDGPKETLAVSKKAKSNISQNA-GEKSK 357
Query: 597 ---THNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQREQ 653
+ ++V+ FE+VPAP DSSD SSS+ES+DE+ DT+AEILACAKKMLRKKQREQ
Sbjct: 358 ISTNARESNKVDDGFEVVPAPATDSSDSSSSEESDDEDPDTRAEILACAKKMLRKKQREQ 417
Query: 654 ILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEA 713
ILDD+YN+YMFDD GLP WFL+EE+RHRQ I+P+TKEE+AA++AQFKEIDARPAKKVAEA
Sbjct: 418 ILDDSYNKYMFDDSGLPKWFLDEEQRHRQPIKPITKEEVAAIRAQFKEIDARPAKKVAEA 477
Query: 714 KARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKEYVVAKKGV 773
KARKKR+AM+KLEKVRKKANVISDQADISDRSKRK I+QLYK AVP++PKKE VVAKKGV
Sbjct: 478 KARKKRIAMKKLEKVRKKANVISDQADISDRSKRKMIDQLYKKAVPQKPKKELVVAKKGV 537
Query: 774 QVRAGKGKVLVDPRMKKDSRTHG---------------SGKARKGGSKKGNI--GKA-RK 815
QVR GKGKVLVD RMKKD+R HG + +A+ G +K N GKA R
Sbjct: 538 QVRVGKGKVLVDRRMKKDARKHGMNKQGKGSKKGKNSKAPRAKGGPAKDSNTPGGKAGRA 597
Query: 816 GK-GSVKASSKKGKKGNK 832
GK G KAS KKG++GNK
Sbjct: 598 GKAGFTKASGKKGRRGNK 615
>gi|222632590|gb|EEE64722.1| hypothetical protein OsJ_19578 [Oryza sativa Japonica Group]
Length = 719
Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/718 (53%), Positives = 499/718 (69%), Gaps = 82/718 (11%)
Query: 87 LEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLAT 146
L +DIT +CRA V+++M+ +GV AFD+VLHDGSPNVGGAWAQEA +Q++LVID+V+LAT
Sbjct: 33 LTEDITTTKCRAAVRRLMDSNGVAAFDVVLHDGSPNVGGAWAQEATAQSSLVIDAVRLAT 92
Query: 147 QFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAK 206
FLAPKG F+TKVFRSQDY++++YCLKQ
Sbjct: 93 MFLAPKGAFITKVFRSQDYNAIMYCLKQ-------------------------------- 120
Query: 207 IDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWS--NN 264
V D L+ +QKR+RDGYE+G+TTLRKV LA+DFIWS
Sbjct: 121 --------------------VRDPLKPDRQKRNRDGYEEGNTTLRKVGLASDFIWSEGQT 160
Query: 265 PLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAF 324
PLE LGS +I+F DPA IK+HELTT+E+KALC+DL VL K FKH+LKWR++I+KA
Sbjct: 161 PLEFLGSFNAISFDDPASLPIKNHELTTDEIKALCEDLYVLDKNSFKHILKWRIRIRKAL 220
Query: 325 SSAEKATVPASASAPTEGENEEDADNRVLNEMEELKYAMDQRKKREKKLLAKKRAKDKAR 384
SS+E + T E D+++L EMEEL +D++KKREKK +K+RAKDKAR
Sbjct: 221 SSSE----VTKKTDDTAVEVNVKDDDQLLQEMEELTSVIDRKKKREKKRQSKRRAKDKAR 276
Query: 385 KATGMQIDVMQDDYTDHELFSLSSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEH 444
KATGMQID D+Y D +LFS+S+IKG K+L A+E + +V A DSE+E + T+E+
Sbjct: 277 KATGMQIDATGDNYGDPDLFSISAIKGGKELQAIESAELNVEDAQGDSENE--DIQTREY 334
Query: 445 VSSDIDSDEERRKYDEQLEEVLDQAYENYVAKRGGSTMQ-RKRAKKAY--AQEDQLSEGD 501
++DSDEE+++YD QLEE+LD+AYE YV K+GG Q RKRAK+ A E+ L G+
Sbjct: 335 SDEEMDSDEEQQRYDAQLEEMLDEAYERYVTKKGGEVKQERKRAKRVNTDADEELLEGGE 394
Query: 502 EDEDTMHTSYDSDKDQGDLDANPLMVPLDDGIRPTQEEITNKWFSQEIFAEAVQNGDLGK 561
+D D + SD++Q D + NPL++ LD +PT+E++ +WFSQ++F EA G + +
Sbjct: 395 DDGDDVDMDQGSDEEQ-DQETNPLLLSLD-AEKPTKEQMMEQWFSQDVFTEA-GTGVVEQ 451
Query: 562 LGSEDETQVDKQAEKHSIPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDD 621
SEDE + + K K+K A K+ H Q + DFEIVPA + DD
Sbjct: 452 SDSEDEREQLTRIAKKKADSGKKEKSA------KAKHLQ----QDDFEIVPAEPVRTEDD 501
Query: 622 SSSDESEDEEVD------TKAEILACAKKMLRKKQREQILDDAYNRYMFDDDGLPDWFLE 675
SSS E +E+D TKAE+LA A+KMLRKKQREQILDDAYN+YMFDD+GLP WF E
Sbjct: 502 SSSSSDESDELDEDLDDDTKAEVLAYARKMLRKKQREQILDDAYNKYMFDDEGLPKWFAE 561
Query: 676 EERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVI 735
+E+RH Q ++PVTKEE+AAM+AQFKEIDARPAKKVAEAKARKKRVAM+KL+K R+KA+ I
Sbjct: 562 DEKRHNQPMKPVTKEEVAAMRAQFKEIDARPAKKVAEAKARKKRVAMKKLDKARQKADAI 621
Query: 736 SDQADISDRSKRKQIEQLYKSAVPKRPKKEYVVAKKGVQVRAGKGKVLVDPRMKKDSR 793
+DQ DI+++SKRK I+++YK A+PK+P+KEYVVAKKGVQVRAGKGK+LVD RMKKD R
Sbjct: 622 ADQNDINEQSKRKMIDRIYKKAIPKKPQKEYVVAKKGVQVRAGKGKILVDKRMKKDKR 679
>gi|358389904|gb|EHK27496.1| hypothetical protein TRIVIDRAFT_63244 [Trichoderma virens Gv29-8]
Length = 823
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 305/842 (36%), Positives = 479/842 (56%), Gaps = 72/842 (8%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+R+++KLVQL+ K+ FL S +LDLCAAPGGW+QVA + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARSAFKLVQLNKKYGFLEKSKVLLDLCAAPGGWLQVAAETMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V SL++G+DL PI PI ++ + DIT +CRA +++ + D VLHDG+PNVG
Sbjct: 68 VNSLIVGVDLAPIKPIPRVITFQSDITTDKCRATIRQHFKTWKA---DAVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AWAQ++ +Q L + S+KLAT+FLA GTFVTKVFRS+DY+ +L+ L QLF KVE KP
Sbjct: 125 AWAQDSFNQAELALHSLKLATEFLAEGGTFVTKVFRSKDYNPLLWVLNQLFTKVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ YKAP IDPRLLD + +F P V +KR RDGY
Sbjct: 185 SSRNVSAEIFVVCRGYKAPKHIDPRLLDARSVFAELSGATPNNEAKVYNPEVKKRKRDGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
EDG+ K A+ FI +N+P+ ILGS ++F GD A +A+ TT E++
Sbjct: 245 EDGEYIQFKEIAASSFIQTNDPIAILGSYNKLSFAQAPNGDIALAALDKLPETTAEIREC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEE 358
C DL+VLG+++FK LLKWR+++++ F ++K + + + G D + R+ E++
Sbjct: 305 CADLKVLGRKEFKLLLKWRLRVREIFGLSQKKSAATTEAEEVVGVESMDEELRIQEELQA 364
Query: 359 LKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVM---------QDDYTDHELFSLSSI 409
LK + ++KRE+ +K + K ++ MQ+++M + +FSL +I
Sbjct: 365 LKDTENAKRKRER----RKENEQKRKEIIRMQLNMMAPMDIGMEESGPLGEGAMFSLKTI 420
Query: 410 KGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSD-IDSDEERRKYDEQLEEVLDQ 468
+ V+ + E +D +E +S++ ++SD E ++ L+ LD
Sbjct: 421 DKTGGMNRFSRGKMAVSNSKEP-------KDLEEDISTEPVESDSE----EDHLDTELDA 469
Query: 469 AYENYVAKR--GGSTMQRKRAKKAYAQEDQ--LSEGDEDED-----TMHTSYDSDKDQGD 519
YE + ++ + + K+A+K + ++ LS G+E E D + G
Sbjct: 470 MYEQFRERKLEADAKYRAKKARKEHKDDEWEGLSAGEEAESDASELEEDDDSSDDDEDGA 529
Query: 520 LDANPLMVPLDDGIRPTQEEITNK---WFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEK 576
L N + LD ++ ++ K +FSQ+IF E LG+ EDET E
Sbjct: 530 LPTNGFLTDLDGQTGEPKDGLSRKASAFFSQDIFKEITGGSLLGE--EEDET-----TEA 582
Query: 577 HSIPEKAKQKMANDAAGPKSTHNQV---SEVEGDFEIVPAPGADSSDDSS---SDESEDE 630
S ++ Q + AA K++ N+ SE +G FE+V A D+ +D SD D
Sbjct: 583 SSTIARS-QVLPTRAATQKASLNEQEDDSEDDGGFEVVKADDDDNWEDKERRRSDGRPDI 641
Query: 631 EVDTKAEILACAKKMLR-KKQREQILDDAYNRYMF-DDDGLPDWFLEEERRHRQAIRPVT 688
++ T AE + A ++ +K +DD +N+ F D DGLP+WFL++E +H + ++P+T
Sbjct: 642 DIIT-AEAMTLAHQLATGQKTTHDAIDDGFNKRAFRDRDGLPEWFLDDEGKHDKPMKPIT 700
Query: 689 KEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRK 748
K A+K + + +ARP KKV EAKARKK +KLEK++KK+++++ ++++ K +
Sbjct: 701 KAAANAIKEKLRAFNARPIKKVREAKARKKFKTAQKLEKLKKKSDMLAADEGMTEKEKAE 760
Query: 749 QIEQLYKSAVPKRPKK--EYVVAK---KGVQVR--AGKGKV-LVDPRMKKDSRTHGSGKA 800
I +L A ++P++ + VVA+ KG+Q R KG+ +VD RMKK+ R +
Sbjct: 761 SISKLISRANRQKPRQPAKLVVARGLNKGIQGRPKGVKGRYRIVDARMKKELRAQKRIQK 820
Query: 801 RK 802
RK
Sbjct: 821 RK 822
>gi|326515274|dbj|BAK03550.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 486
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 221/366 (60%), Positives = 273/366 (74%), Gaps = 12/366 (3%)
Query: 1 MGKV-KGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQV 59
MGK KGK R D+YY LAKE GYRSRA++KL QLD +F FL ++ AVLDLCAAPGGW+QV
Sbjct: 1 MGKAAKGKQRRDEYYHLAKEQGYRSRAAFKLQQLDDRFRFLPAARAVLDLCAAPGGWVQV 60
Query: 60 AVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDG 119
AV R P G+ V+G+DLVPI P+RGA SL +DIT CR+ V+++M+ GV FD+VLHDG
Sbjct: 61 AVARAPAGAFVVGVDLVPIRPVRGAHSLTEDITTTRCRSAVRRLMDSRGVAVFDVVLHDG 120
Query: 120 SPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKV 179
SPNVGGAWAQEA +Q+ALVID+V+LAT FLAPKG F+TKVFRSQDYS++++CLKQLF+KV
Sbjct: 121 SPNVGGAWAQEATAQSALVIDAVRLATAFLAPKGAFITKVFRSQDYSAIMFCLKQLFDKV 180
Query: 180 EVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKV--VDVLRGTK-- 235
EV KP ASR SAEIY++ +KYKAPAKI P LLD+K+LF SV+P K DVL K
Sbjct: 181 EVTKPRASRGTSAEIYIICLKYKAPAKIQPELLDIKHLF--SVDPEKSTPTDVLDTNKNA 238
Query: 236 QKRHRDGYEDGDTTLRKVSLATDFIWS--NNPLEILGSVTSITFGDPACSAIKDHELTTE 293
+KR R GY G T L KV LA+DFIWS P E LGS T I+F DPA IK+HELTT+
Sbjct: 239 KKRTRGGYAAGVTVLEKVGLASDFIWSEAQKPREFLGSFTKISFDDPASLPIKNHELTTD 298
Query: 294 EVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVL 353
EVK LC+DL+VL K FKH+LKWR +++ A S+ + T A +A + D ++L
Sbjct: 299 EVKCLCEDLQVLDKNSFKHILKWRTRLRNALPSSSQVTPKADGTATN---TKVKGDVQLL 355
Query: 354 NEMEEL 359
EMEE+
Sbjct: 356 QEMEEM 361
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 9/86 (10%)
Query: 448 DIDSDEERRKYDEQLEEVLDQAYENYVAKRGGSTMQ-RKRAKKAYAQEDQ--LSEGDEDE 504
++ SDEE QL+ +LD+AYE YV K+G Q KRAK+ D L G++D
Sbjct: 360 EMGSDEE-----HQLDGMLDEAYERYVTKKGEEVKQEHKRAKRIDPDADAGLLEGGEDDG 414
Query: 505 DTMHTSYDSDKDQGDLDANPLMVPLD 530
+ T S+KDQ D + NPL+ LD
Sbjct: 415 GNVGTDQGSNKDQ-DQETNPLLSCLD 439
>gi|281211427|gb|EFA85591.1| rRNA methyltransferase [Polysphondylium pallidum PN500]
Length = 830
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 312/868 (35%), Positives = 471/868 (54%), Gaps = 109/868 (12%)
Query: 1 MGKVK---GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWM 57
MG+ K K RLDK+Y LAKE GYRSRA++KL+QL+ K++FL S+ A LDLCAAPGGWM
Sbjct: 11 MGQKKKKLAKGRLDKFYYLAKEQGYRSRAAFKLIQLNKKYNFLGSAKACLDLCAAPGGWM 70
Query: 58 QVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117
QVA + +PV SL++G+DL PI PI+ + L++DIT +CR +KK ++ V D+ LH
Sbjct: 71 QVASKYMPVQSLIVGVDLDPIRPIKNCIGLQEDITTQKCRTEIKKSLKTWKV---DICLH 127
Query: 118 DGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFE 177
DG+PN+G +W Q+A Q L + ++KLAT+FL G FVTKVFR DY+++L+ QLF+
Sbjct: 128 DGAPNMGTSWIQDAYQQAELTLHALKLATEFLVAGGWFVTKVFRGPDYNALLWVFHQLFK 187
Query: 178 KVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQK 237
KV+ KP ASR+ASAEI+++ + AP IDP+LLD KY+F+ E K +D L T K
Sbjct: 188 KVDSTKPQASRNASAEIFVVCQGFLAPKHIDPKLLDPKYVFKEIKEAPKHID-LGKTTTK 246
Query: 238 RHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKA 297
R+R GYE+G T + K + DF+ N+ L+IL SV S+ F D DH TT E+K
Sbjct: 247 RNRSGYEEGITEIAKTATVKDFVEGNDHLKILASVNSLQF-DVESKMYFDHPSTTTEIKE 305
Query: 298 LCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEME 357
D++VLGK DFK L+KW+ ++ + S E +A E+ NR+L + E
Sbjct: 306 CFKDIKVLGKFDFKVLIKWKKEMLEYKESLEGKKEEEAAQV------EQPDTNRLLTQ-E 358
Query: 358 ELKYAMDQRKKREKKLLAKKRAKD------------------KARKATGMQI--DVMQDD 397
EL +D KLL + ++K + R M I D + D
Sbjct: 359 ELDENLD-------KLLEENQSKLEKRKKKEKKKQNEKKRVLQQRLQLNMTIPGDSI-DQ 410
Query: 398 YTDHELFSLSSIKGKKDL----AAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDE 453
D+ LF L KGK D A+ + D D++ DSEDE QE +D D +
Sbjct: 411 IDDNNLFDLQ--KGKDDQFEIDASADVDPDEIV----DSEDEM----NQEEYENDEDFEM 460
Query: 454 ERRKYDEQLEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQEDQLSEGD---------EDE 504
+ ++ +E+ LD+ Y Y+ + G + + ++ +D+LS+ ED+
Sbjct: 461 DNEEF---MEQQLDEQYSQYLKRVKGKSGEVDVSR---VTKDKLSDYSGKGMDDLEIEDD 514
Query: 505 DTMHTSYDSDKDQGDLDANPLMVPLDDGIRPTQEEITNKWFSQEIFAEAVQNGDLGKLGS 564
+TM L N + D R T E+ + WF+Q +F V D +
Sbjct: 515 ETMEMK---------LSDNKSSLLYDGKKRATSEKSASMWFNQSLF-RGVTGDDEDTAAA 564
Query: 565 EDETQVDKQAEKHSIPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDDSSS 624
E++ ++D+ + ++K ++ K + S + ++ P D SD+
Sbjct: 565 EEDPELDRPIKLQKTSTESKSTTKKESKKSKKDKSSSSSSK--YQSAPTGQLDDSDEEQE 622
Query: 625 D--ESEDEEVDT-------------------KAEILACAKKMLRKKQREQILDDAYNRYM 663
D + ED + + + + LA MLRKK ++ + DDA+NRY
Sbjct: 623 DAKQGEDNQFEVVPMEQDIEYESSDSEDEDSRIKTLAMGTMMLRKKVKQDMTDDAFNRYA 682
Query: 664 FDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMR 723
F+DD LPDWF ++E RH + P+TKE + +K + +EID+RP KK+AEAKARKK +
Sbjct: 683 FNDDDLPDWFTQDEDRHNKPQTPLTKEMVEEIKREIREIDSRPIKKIAEAKARKKYRTAK 742
Query: 724 KLEKVRKKANVISDQADISDRSKRKQIEQLYKSA--VPKRPKKEYVVAKKGVQVRAGKGK 781
+LEK++ KAN + D ++S+R K + IE+LY+++ +K+ VV K + G G
Sbjct: 743 RLEKLKDKANSVVDNEEMSNREKTRAIEKLYENSNKAGHAKQKKLVVISKKFKTGGGSGS 802
Query: 782 --VLVDPRMKKDSRTHGSGKARKGGSKK 807
+VD RMKK+ R +A+K G++K
Sbjct: 803 KYKVVDKRMKKELRATKRVEAKKKGTRK 830
>gi|19114041|ref|NP_593129.1| rRNA methyltransferase Spb1 (predicted) [Schizosaccharomyces pombe
972h-]
gi|9910811|sp|O42832.2|SPB1_SCHPO RecName: Full=AdoMet-dependent rRNA methyltransferase spb1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|4106665|emb|CAA22605.1| rRNA methyltransferase Spb1 (predicted) [Schizosaccharomyces pombe]
Length = 802
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 307/844 (36%), Positives = 482/844 (57%), Gaps = 80/844 (9%)
Query: 1 MGKVK---GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWM 57
MGK + K RLDK+Y+LAKE GYRSRA++KLVQL+ K+SFL + ++DLCAAPGGW+
Sbjct: 1 MGKSQKKTAKGRLDKWYKLAKEQGYRSRAAFKLVQLNQKYSFLEKAKVIIDLCAAPGGWL 60
Query: 58 QVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117
QVA + GSL++G+DL PI PI + +DIT +CR++++ ++ D+VLH
Sbjct: 61 QVASKTCKPGSLIVGVDLAPIKPIPNCHTFVEDITSDKCRSQLRGYLKTWKA---DVVLH 117
Query: 118 DGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFE 177
DG+PNVG AW Q+A Q LV+ S+KLA +FL GTFVTKVFRS+DY+++L+ KQLF
Sbjct: 118 DGAPNVGSAWLQDAYGQAQLVLMSMKLACEFLVAGGTFVTKVFRSRDYNNLLWVFKQLFN 177
Query: 178 KVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVD--VLRGTK 235
KVE KP +SR+ SAEI+++ YKAP K+DPR D + +F+ EP VD V K
Sbjct: 178 KVEATKPPSSRNVSAEIFVVCRGYKAPKKLDPRFTDPRTVFEEVQEPVTNVDAKVFHPEK 237
Query: 236 QKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF--GDPACSAIKDHELTTE 293
+KR R+GY D D TL K LA++F+ +N+P++ILG+ I F D C + + ++TTE
Sbjct: 238 RKRSREGYADDDYTLHKTVLASEFVTANDPIQILGTSAEIVFPKDDEECQRLYNLDVTTE 297
Query: 294 EVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVL 353
E+ C DL+VLGK++F+ +L+WR++I+ +K V E E D + R+
Sbjct: 298 EILLCCSDLQVLGKKEFRDILRWRLKIRDEMGIGKK--VEDEQKTVVEEIPEMDEEERLD 355
Query: 354 NEMEELKYAMDQRKKREKKLLAKKRAKDKARKATG----MQIDVMQDDYTDHELFSLSSI 409
E+++L A + KRE++ +++ ++ R G M I + + + LF L++
Sbjct: 356 QELQDLSEAERVKLKRERRKANQRKQREIVRMQMGMLAPMDIGLEHEAMGEDSLFGLATA 415
Query: 410 K--GKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLD 467
+ G K+L ++ +S DE + D + + DSD+ER ++LE LD
Sbjct: 416 EKHGLKEL-------ENGTLPVTESVDEEVSTDNE----VEYDSDDER----DRLEADLD 460
Query: 468 QAYENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQ------GDLD 521
Y +Y ++ S + + R KKA D DE+ + + +SD Q D
Sbjct: 461 SMYSDYTKRKAESDV-KYRVKKARGDLD-----DEEWNGIDNGTESDDSQIAETNFATPD 514
Query: 522 ANPLMVP-LDDGIRPTQEEITNK---WFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKH 577
+ L LD G T++ ++ K +F Q+IF + +++ D V+ +
Sbjct: 515 KDRLTTSLLDKG--STKDGLSRKARMFFDQDIF-DGIEDAD---------ADVEIMSMNR 562
Query: 578 SIPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTK-- 635
+ +K + ++A+ S +Q + E+VP A DD + +S+++E + +
Sbjct: 563 AAIKKREAELASQNNDDGSKGDQSEDSNDHIEVVPVASAHDEDDDWNSDSDNDENNVEIV 622
Query: 636 -AEILACAKKML-RKKQREQILDDAYNRYMFDD-DGLPDWFLEEERRHRQAIRPVTKEEI 692
AE + A+ + R+K + ++D+ YNR+ F +GLPDWFL+EE + +P+TKE +
Sbjct: 623 TAEAMTLAQDIASRRKSKADLIDEGYNRWSFQSKEGLPDWFLDEETTVNKPNKPITKEAV 682
Query: 693 AAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQ 752
A++ + K ++ARP KKV EA+ RKK +++L++V KKA IS+ D+++ K K+I +
Sbjct: 683 LALREKMKALNARPIKKVLEAQGRKKMRTIKRLQRVAKKAEGISESGDMTESEKAKEISR 742
Query: 753 LYKSAVPKRPKKE--YVVAK---KGVQVR--AGKGKV-LVDPRMKKDSRTHGSGKARKGG 804
L A +PK + VVAK KG++ R KGK +VD RMKKD R A+K
Sbjct: 743 LVSRATKSKPKAKPTLVVAKGPNKGLKSRPKGVKGKYKMVDSRMKKDLR------AQKRL 796
Query: 805 SKKG 808
+KKG
Sbjct: 797 AKKG 800
>gi|350399407|ref|XP_003485514.1| PREDICTED: putative rRNA methyltransferase 3-like isoform 2 [Bombus
impatiens]
Length = 823
Score = 437 bits (1124), Expect = e-119, Method: Compositional matrix adjust.
Identities = 317/851 (37%), Positives = 477/851 (56%), Gaps = 85/851 (9%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R DK+Y+LAKE GYRSRA++KL+Q++ KF FL+ S +DLCAAPGGWMQ+A Q +P
Sbjct: 9 GKQRKDKFYQLAKETGYRSRAAFKLIQMNRKFEFLQKSRVCIDLCAAPGGWMQIARQNMP 68
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V S+++G+DL PI PI G +SL +DIT +CR + + ++ D+VLHDG+PNVG
Sbjct: 69 VSSVIIGVDLFPIKPIPGCISLVEDITTDKCRVSISRELKTWKA---DVVLHDGAPNVGK 125
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
W +A Q L + ++K+AT FL P G F+TKVFRS+DY+++++ LKQLF KV KP
Sbjct: 126 NWLHDAYQQIVLTLAALKMATYFLRPGGWFITKVFRSKDYNALVWVLKQLFRKVHATKPQ 185
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHRDGYE 244
ASR+ SAEI+++ Y AP K+DP+ LD KY+F + +EP ++V K+K +GY
Sbjct: 186 ASRAESAEIFVVCQYYIAPDKLDPKFLDPKYVFSELEIEPTNKLNVYNPAKKKDKVEGYP 245
Query: 245 DGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLRV 304
+ D TL DFI N +E L + + I F D I +HE TT+E+K C D++V
Sbjct: 246 ENDYTLYHKLSVKDFIAHENAVEALQNASEIVFDD---ETIANHEKTTKEIKECCKDIKV 302
Query: 305 LGKQDFKHLLKWRMQIKKAFSSAEK----ATVPASAS-AP--TEGENEEDADNRVLNEME 357
LGK+D + L+ W +K++ E +P A+ AP ++ E E+ D ++ ++E
Sbjct: 303 LGKKDLRSLINWWKAVKESLKEKEPDENVQNLPDEATKAPPMSQEELEDLEDEQIRKQIE 362
Query: 358 ELKYAMDQRKKREKKLLAKKRAKDKARKATGM-----QIDVMQDDYTDHELFSLSSIKGK 412
EL+ + KR+KK K+R K R M + V++ D ++FSL IK
Sbjct: 363 ELREEEARELKRKKKKANKERQKLNERLKLKMIHKGNEGPVLEGD----DMFSLKDIKTH 418
Query: 413 KDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRK-----YDEQLEEVLD 467
+ LA + D D+ A SD+DSD E+RK Y++ E LD
Sbjct: 419 QQLANIMDQDPDLVA------------------QSDVDSDAEQRKPKKVRYNKD-EGHLD 459
Query: 468 QAYENYVAKRGGSTMQRKRAKKAYAQEDQ-----LSEGDEDEDTMHTSYDSDKDQGDLD- 521
+ N K S + + L+E D D+DT S K + ++D
Sbjct: 460 SS--NLYYKTEDSEPEDSSDASDDDSDSNKSGLGLNESD-DDDTKKVS----KKRKNIDE 512
Query: 522 --ANPLMVPLDDGIRPTQE-EITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHS 578
NPL+ LD + T+ WF ++IF +N ++ K +++ ++DK E++
Sbjct: 513 DPENPLLTDLDHRDKKTKRIHKAELWFEKDIF----KNLEVEK---DEDFELDKMVEEYK 565
Query: 579 IPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKA-- 636
+K + + D++ ++V + + + G +++D +S D D + +
Sbjct: 566 --KKGGRIIGQDSSIDSDKESKVKKSKNIQKKKQGDGENNNDYNSDDTDSDYDKRKRLSE 623
Query: 637 EILACAKKMLR-KKQREQILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAM 695
E LA +++ KK R ++D A+NRY F+D+ LPDWF+++E +H + + PV KE +
Sbjct: 624 EDLALGSLLIQSKKTRRDLVDSAWNRYAFNDEKLPDWFVQDEEKHMKNVMPVPKELVDEY 683
Query: 696 KAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYK 755
K + ++++ RP KKV EAK+RKKR A+RKLEK +KK I D DISDR K KQ++ LYK
Sbjct: 684 KKRVEDLNVRPIKKVIEAKSRKKRRALRKLEKAKKKVETIMDNTDISDREKAKQVQALYK 743
Query: 756 SAVPKRPKKE--YVVAKKGV-QVRAG-----KGKV-LVDPRMKKDSRTHGSGKARKGGSK 806
A K PKK YVV KK + Q +A KG+ LVDPRMKKD R + + KG K
Sbjct: 744 KA-HKEPKKNVTYVVMKKHMAQKKAARPPGVKGRYKLVDPRMKKDLRAAKAKEKTKGRGK 802
Query: 807 KGNIGKARKGK 817
K + GK +GK
Sbjct: 803 KNSGGKPLRGK 813
>gi|340514740|gb|EGR45000.1| hypothetical protein TRIREDRAFT_23327 [Trichoderma reesei QM6a]
Length = 828
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 304/854 (35%), Positives = 468/854 (54%), Gaps = 91/854 (10%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K+ FL S +LDLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAEVMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V SL++G+DL PI PI ++ + DIT +CRA +++ + D VLHDG+PNVG
Sbjct: 68 VNSLIVGVDLAPIKPIPRVITFQSDITTDKCRATIRQHFKTWKA---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AWAQ++ +Q L + S+KLAT+FLA GTFVTKVFRS+DY+ +L+ L QLF KVE KP
Sbjct: 125 AWAQDSFNQAELALQSLKLATEFLAEGGTFVTKVFRSKDYNPLLWVLNQLFTKVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ YKAP IDPR LD + +F P V +KR RDGY
Sbjct: 185 SSRNVSAEIFVVCRGYKAPKHIDPRFLDPRSVFAELAGGTPNNEAKVYNPEVKKRKRDGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD K A+DFI +++P+ ILGS ++F GD A +A+ TT E++
Sbjct: 245 EEGDYIQFKEIAASDFIQTSDPIAILGSYNKLSFHQSPNGDIALAALDKLPETTAEIREC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEE 358
C DL+VLG+++FK LLKWR++++ F ++K + G D + R+ E++
Sbjct: 305 CADLKVLGRKEFKLLLKWRLKVRDIFGLSQKKAAAPEVAEEVAGVESMDEELRIQEELQA 364
Query: 359 LKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVM---------QDDYTDHELFSLSSI 409
+K + ++KREK +K + K R+ MQ+++M + +FSL +I
Sbjct: 365 MKDNENAKRKREK----RKENEQKRREIIRMQLNMMAPMDIGMEESGPMGEGAMFSLKTI 420
Query: 410 KGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQ---LEEVL 466
+ +N + PN +T+ +D+ E + D + LE L
Sbjct: 421 D----------KSNGMNRFSRGKMITVPNTETK-AAEETLDASAEAAESDSEEDLLETEL 469
Query: 467 DQAYENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDA---- 522
D YE Y +R + RAKKA + D++ + + D+D D +L
Sbjct: 470 DAMYEQY-RERKLEADTKYRAKKARKEHK-----DDEWEGLSGGEDADSDASELKEEDDD 523
Query: 523 ------------NPLMVPLDDGIRPTQEEITNK---WFSQEIFAEAVQNGDLGKLGSEDE 567
N L+ LD +Q+ ++ K +FSQ+IF E + G L LG+E+E
Sbjct: 524 DSSDDEDEGLPKNGLLTDLDGQAGESQDGLSRKASAFFSQDIFKE-ITGGSL--LGAEEE 580
Query: 568 TQVD-----KQAEKHSIP-EKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDD 621
Q +A +P +K QK++ G S +Q +FE+V D ++
Sbjct: 581 DQETAPANGTKARTSELPAQKTMQKLSLQDDGVDSEDDQ------EFEVVRGEEEDDWEE 634
Query: 622 SSSDESEDEEVD---TKAEILACAKKMLR-KKQREQILDDAYNRYMF-DDDGLPDWFLEE 676
S D +D AE + A ++ +K +DD +N+ F D DGLP+WFL++
Sbjct: 635 KDKRRS-DGRIDIDIVTAEAMTLAHQLATGQKTSHDAIDDGFNKRAFRDKDGLPEWFLDD 693
Query: 677 ERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVIS 736
E +H + +P+TK AA+K + + +ARP KKV EAKARKK +KLEK++KK+++++
Sbjct: 694 EGKHDKPQKPITKAAAAAIKEKLRAFNARPIKKVREAKARKKFKTAQKLEKLKKKSDMLA 753
Query: 737 DQADISDRSKRKQIEQLYKSAVPKRPKK--EYVVAK---KGVQVR--AGKGKV-LVDPRM 788
++++ K + I++L A ++P++ + VVA+ KGV+ R KG+ +VD RM
Sbjct: 754 ADEGMTEKEKAESIQKLLSKAKKQKPRQPAKLVVARGLNKGVKGRPKGVKGRYRIVDARM 813
Query: 789 KKDSRTHGSGKARK 802
KK+ R + RK
Sbjct: 814 KKELRAQKRIQKRK 827
>gi|67515621|ref|XP_657696.1| hypothetical protein AN0092.2 [Aspergillus nidulans FGSC A4]
gi|73621939|sp|Q5BH88.1|SPB1_EMENI RecName: Full=AdoMet-dependent rRNA methyltransferase spb1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|40746114|gb|EAA65270.1| hypothetical protein AN0092.2 [Aspergillus nidulans FGSC A4]
gi|259489716|tpe|CBF90216.1| TPA: AdoMet-dependent rRNA methyltransferase spb1 (EC
2.1.1.-)(2'-O-ribose RNA
methyltransferase)(S-adenosyl-L-methionine-dependent
methyltransferase)
[Source:UniProtKB/Swiss-Prot;Acc:Q5BH88] [Aspergillus
nidulans FGSC A4]
Length = 806
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 311/845 (36%), Positives = 473/845 (55%), Gaps = 110/845 (13%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+YRLAKE GYR+RA++KLVQL+ K+ FL S +LDLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYRLAKEKGYRARAAFKLVQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
SL++G+DL PI PI ++ +QDIT +CRA ++ ++ D VLHDG+PNVG
Sbjct: 68 AQSLIVGVDLAPIKPIPRVITFQQDITTEKCRATIRSHLKHWKA---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A SQ LV++S+KLAT+FL GTFVTKVFRS+DY+ +L+ KQLF VE KP
Sbjct: 125 AWVQDAFSQAELVLESLKLATEFLVEGGTFVTKVFRSKDYNPLLWVFKQLFMSVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ YKAP +IDP+ LD K++F P V K+KR R+GY
Sbjct: 185 SSRNVSAEIFVVCRGYKAPKRIDPKFLDSKHVFAELADPTPNNEAKVFNPEKKKRKREGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD T K T+FI + +P+ ILGS ++F GD A + + TT+E++
Sbjct: 245 EEGDWTQFKEIPVTEFINTTDPIAILGSCNKLSFQQQPGGDLALATLDRLPETTDEIRNC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEK-------ATVPASASAPTEGENEEDADNR 351
C+DL+VLGK++F++LL+WR+++++ F K + AP + E +
Sbjct: 305 CEDLKVLGKKEFRNLLRWRLKVREKFGLVVKKGQAKDDEAEEVAEIAPMDDELAIQEELL 364
Query: 352 VLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQ-----DDYTDHELFSL 406
L E E + ++RK+ E+K K+ + + T M I + Q +D T FSL
Sbjct: 365 RLKEKESARSKKERRKENERK--RKEIVRMQMHMTTPMDIGMEQLGPGGEDAT----FSL 418
Query: 407 ---------SSIKGKKDLAAVEYDDDDVNAAA--EDSEDERPNRDTQEHVSSDIDSDEER 455
+++ K+LA +E + ++ + +DS+DE
Sbjct: 419 KRAEKAGAAAAMASGKELAVIESESEESESETEYDDSDDE-------------------- 458
Query: 456 RKYDEQLEEVLDQAYENYVAKR--GGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDS 513
++LE LD YE Y ++ S ++ K+A+K Y E DE E + +
Sbjct: 459 ---GDRLERELDSLYEQYQERKEDKDSKLRAKKARKDY-------EADEWEGFSDSDKEG 508
Query: 514 DKDQGDLDANPLMVPLDDGIRPTQEEITNK---WFSQEIF--AEAVQNGDLGKLGSEDET 568
D+ D +A P VP + PT ++N +F Q+IF + V++ + G+ + T
Sbjct: 509 SDDEED-EAKP-NVP----VVPTNGALSNNAALFFDQDIFQGLDDVEDEEDEAEGTNNMT 562
Query: 569 QVDKQAEKHSIPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESE 628
+++ E+ E+ + K ++AA K +V E P DSSDD D E
Sbjct: 563 VANEREEQQEEEEEEQPK--SEAAPEK--KKKVKETANS-----KPSEDSSDDEYEDTDE 613
Query: 629 --------DEEVDTKAEILACAKKMLRKKQREQ-ILDDAYNRYMFDD-DGLPDWFLEEER 678
D ++ T AE +A A++M +++ Q + DD +NRY F D DGLP+WFL++E
Sbjct: 614 PRKKNGQLDIDIIT-AEAMALAQQMATGEKKSQDVFDDGFNRYAFRDVDGLPEWFLDDEN 672
Query: 679 RHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQ 738
+H + RP+TK AA++ +++ I+ARP KKV EAK RKK A +++EK+RKK+ +++D
Sbjct: 673 KHSKPNRPITKAAAAAIQEKWRAINARPIKKVMEAKGRKKFKAAQRIEKLRKKSALLADD 732
Query: 739 ADISDRSKRKQIEQLYKSAVPKRPKK--EYVVAKKGVQVRAG-----KGKV-LVDPRMKK 790
+S+R K + I ++ A K+PK+ + VVAK G + +G KGK +VD RMKK
Sbjct: 733 ETMSERDKAQAIARMMSRAAKKKPKQNVKLVVAKGGNRGISGRPKGVKGKYKIVDARMKK 792
Query: 791 DSRTH 795
D R
Sbjct: 793 DVRAQ 797
>gi|327297282|ref|XP_003233335.1| rRNA methyltransferase [Trichophyton rubrum CBS 118892]
gi|326464641|gb|EGD90094.1| rRNA methyltransferase [Trichophyton rubrum CBS 118892]
Length = 834
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 309/832 (37%), Positives = 468/832 (56%), Gaps = 82/832 (9%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+YRLAKE GYR+RA++KL+QL+ K+ FL S +LDLCAAPG W QVA + +P
Sbjct: 30 GKGRLDKWYRLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMP 89
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
SL++G+DL PI PI ++ + DIT +CRA +++ + D VLHDG+PNVG
Sbjct: 90 SQSLIVGVDLSPIKPIPKVITFQSDITTDKCRATIRQHFKTWKA---DTVLHDGAPNVGT 146
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A SQ LV+ S+KLAT+FL P G+FVTKVFRS+DY+ +L+ KQLF VE KP
Sbjct: 147 AWVQDAFSQAELVLQSLKLATEFLVPGGSFVTKVFRSKDYNPLLWVFKQLFTTVEATKPP 206
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ + +KAP IDP+ LD K++F P V K+KR RDGY
Sbjct: 207 SSRNVSAEIFVVCLGFKAPKHIDPKFLDPKHVFAELQDPNPNNEAKVFNPEKKKRKRDGY 266
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+ D T KV AT+FI + +P+ ILGS +TF GD A + ++ TT E++
Sbjct: 267 EENDWTQHKVLPATEFINTIDPISILGSYNKLTFTQSPGGDLALATLERLPETTNEIRMC 326
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSA-------EKATVPASASAPTEGENEEDADNR 351
C+DL+VLGK+DF+ LL+WR+++++ F A E+AT + P + E D R
Sbjct: 327 CEDLKVLGKKDFRQLLRWRIKVREKFGLAVKKGPKNEEATEEIAEVEPMDEELALQEDLR 386
Query: 352 VLNEMEELKYAMDQRKKREKKL--LAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSI 409
++E E K ++RK+ E+K + + + K GM+ D +F L +
Sbjct: 387 RMHERETSKNKRERRKENERKRKDIVRLQMNMTTPKEIGME---QAGPLGDGAMFRLRT- 442
Query: 410 KGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQA 469
+K AA + AA E S +E + D D D +R LE LD+
Sbjct: 443 -AEKLPAARSISASSMTAALESSSEE-----EEGFSEEDSDEDGDR------LERQLDEL 490
Query: 470 YENYVAKRGG--STMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDANPLMV 527
Y Y R + ++ K+++K Y E+ DE E +SD D +P
Sbjct: 491 YSQYQEARDSRDAKLRAKKSRKDYETEEWEGFSDERE-----GEESD------DESPRTF 539
Query: 528 PLDDGIRPTQEEI---TNK---WFSQEIFAE--AVQNGDLGKLGSEDE--TQVDKQA-EK 576
P + P + + +NK +F Q+IF + AV++G+ S+D T+ + A E+
Sbjct: 540 P----VAPVGDHVKGLSNKAAMFFDQDIFRDLGAVEDGE----ASDDPSATKANGMAKEQ 591
Query: 577 HSIPEKAKQKMANDAAGPK---STHNQVSEVE-GDFEIVPAPGADSSDDSSSDESEDEEV 632
++ ++ + +A P ++ + E++ G EI +D ++ +V
Sbjct: 592 STVTKEEETNNKREATSPSPSVASDSSYQEIKLGKPEIFEDDDDPQLNDDPRKKNGQLDV 651
Query: 633 D-TKAEILACAKKMLR-KKQREQILDDAYNRYMFDD-DGLPDWFLEEERRHRQAIRPVTK 689
D AE +A A +M R +K E +DD ++RY F D DGLP WFL++E +H + RP+T
Sbjct: 652 DIITAEAMALAHQMARGEKTTEDFVDDGFHRYSFRDVDGLPQWFLDDENQHSKIQRPITA 711
Query: 690 EEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQ 749
AA++ + + I+ARP KKV EAK+RKK +KLEK+RKK++++++ IS+R K +
Sbjct: 712 AAAAAIREKMRAINARPIKKVREAKSRKKFKQAQKLEKLRKKSSLLAEDEGISERDKAQS 771
Query: 750 IEQLYKSAVPKRPKK--EYVVAK---KGV--QVRAGKGKV-LVDPRMKKDSR 793
I ++ A K+PK+ + VVA+ KG+ + R KG+ +VD RMKKD R
Sbjct: 772 IAKMISKATKKKPKQSVKLVVARGGNKGISGRPRGVKGRYKIVDARMKKDIR 823
>gi|380029605|ref|XP_003698459.1| PREDICTED: LOW QUALITY PROTEIN: putative rRNA methyltransferase
3-like [Apis florea]
Length = 853
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 319/892 (35%), Positives = 479/892 (53%), Gaps = 109/892 (12%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
GK+ GK R DK+Y+LAKE GYRSRA++KL+QL+ KF FL+ S +DLCAAPGGWMQVA
Sbjct: 5 GKI-GKQRKDKFYQLAKETGYRSRAAFKLIQLNRKFEFLQKSRVCIDLCAAPGGWMQVAR 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
Q +PV S+V+G+DL PI PI G +SL +DIT +CR + + E D+VLHDG+P
Sbjct: 64 QNMPVSSIVIGVDLFPIKPIPGCISLIEDITTDKCRISIAR---ELKTWKADVVLHDGAP 120
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG W +A Q L + ++K+AT FL G F+TKVFRS+DY+ +++ LKQLF+KV
Sbjct: 121 NVGKNWLHDAYQQIVLTLGALKMATHFLRSGGWFITKVFRSKDYNPLIWVLKQLFKKVHA 180
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHR 240
KP ASR+ SAEI+++ Y AP K+DP+ LD KY+F + +EP +++ TK+K
Sbjct: 181 TKPQASRTESAEIFVVCQYYIAPDKLDPKFLDPKYVFSELEIEPINKLNIFNPTKKKDKA 240
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
+GY + D TL DFI N +E L + + I F D I +HE TT+E+K C
Sbjct: 241 EGYPENDYTLYHKLSVKDFIAHENVVEALQNTSEIVFDD---EIITNHEKTTKEIKECCK 297
Query: 301 DLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASA-------SAPTEGENEEDA-DNRV 352
D++VLGK+D ++L+ W IK++ E +AP E ED D ++
Sbjct: 298 DIKVLGKKDLRNLINWWKIIKESLKEKEPIDENTQNLLDETIETAPMSQEELEDIEDEQI 357
Query: 353 LNEMEELKY--AMDQRKKREKKLLAKKRAKDKARKAT---GMQIDVMQDDYTDHELFSLS 407
++EELK A D ++K++K +++ ++ G + +++ D ++FSL
Sbjct: 358 RKQIEELKENEARDLKRKKKKANKQRQKLNERLNLKMIHKGNEGPILEGD----DMFSLK 413
Query: 408 SIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEV-- 465
IK + L + D D N AE SD+DSD E++K + + +
Sbjct: 414 EIKTHQQLENIM--DQDPNILAE----------------SDVDSDVEQKKSKKIIYKKDK 455
Query: 466 --LDQA---YENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDL 520
LD + Y++ ++ S + + L+E D DED + + + DL
Sbjct: 456 GHLDSSGLYYKSEDSELDDSDDISDNDSNSNKSDLGLNESD-DEDIKNIXKKRNNIEEDL 514
Query: 521 DANPLMVPLDDGIRPTQE-EITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEK--- 576
+ NPL+ LD + T+ WF ++IF D ++ ++DK E+
Sbjct: 515 E-NPLLTDLDHRDKKTKRIHKAELWFEKDIFKNLEDEKD-------EDFELDKMIEEYRK 566
Query: 577 ---HSIPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGAD-SSDDSSSDESED--- 629
H I E ++ D+ N ++ E D + D +SDDS+SD +
Sbjct: 567 KGGHIIGED----ISVDSDKENKIKNHINIKEKDIQEDDENNNDLNSDDSNSDYDVNKMM 622
Query: 630 --------------EEVDTKA--------EILACAKKMLR-KKQREQILDDAYNRYMFDD 666
++V++K E LA +++ KK R ++D A+NRY F+D
Sbjct: 623 KKSKRMKLVTKIILKQVNSKLKKRKHLSEEDLALGSLLIQSKKTRRDLIDSAWNRYAFND 682
Query: 667 DGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLE 726
+ LPDWF+++E +H + + PV E + K + ++++ RP KKV EAKARKKR A+RKLE
Sbjct: 683 EKLPDWFIQDEEKHMKNVIPVPNELVNEYKKRIEDLNIRPIKKVIEAKARKKRRALRKLE 742
Query: 727 KVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKE--YVVAKKGVQVRAGK----- 779
K +KK I D DIS++ K KQI+ LYK A K PKK+ YVV KK + + K
Sbjct: 743 KAKKKVESIMDNTDISNKEKAKQIQTLYKKA-HKEPKKDVTYVVMKKHMTQKKTKRPPGV 801
Query: 780 -GKV-LVDPRMKKDSRTHGSGKARKGGSKKGNIGKARKGKGSVKASSKKGKK 829
G+ LVDPRMKKD R + + K KK + ++ +G K + KGKK
Sbjct: 802 KGRYKLVDPRMKKDLRAAKAKEKTKRRGKKNHNNHSKPPQG--KPKNHKGKK 851
>gi|367037159|ref|XP_003648960.1| hypothetical protein THITE_2107005 [Thielavia terrestris NRRL 8126]
gi|346996221|gb|AEO62624.1| hypothetical protein THITE_2107005 [Thielavia terrestris NRRL 8126]
Length = 822
Score = 431 bits (1107), Expect = e-117, Method: Compositional matrix adjust.
Identities = 300/834 (35%), Positives = 469/834 (56%), Gaps = 76/834 (9%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K+ FL S VLDLCAAPG W QV + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSRVVLDLCAAPGSWCQVCAETMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
S+++G+DL PI PI ++ + DIT +CRA ++ ++ D VLHDG+PNVG
Sbjct: 68 KDSIIIGVDLAPIKPIPKVITFQSDITTEKCRATIRTHLKTWKA---DCVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q++ +Q L + S+KLAT+FL GTFVTKVFRS+DY+ +L+ L QLF KVE KP
Sbjct: 125 AWVQDSYNQAELALHSLKLATEFLIEGGTFVTKVFRSKDYNPLLWVLNQLFTKVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVE--PRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ +KAP +IDPRLLD + +F+ + P V +KR R+GY
Sbjct: 185 SSRNVSAEIFVVCRGFKAPKRIDPRLLDPRSVFEDLKDPAPNNEAKVYNPQVKKRKREGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD T K A++FI + +P+ ILG +TF GD A +A+ T +E++A
Sbjct: 245 EEGDYTQFKEIAASEFIQTTDPIAILGQYNRLTFEQAQNGDVALAALDRLPETNDEIRAC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEE 358
C DL++LG+++FK LLKWR+++++ F K T + D + ++ E++
Sbjct: 305 CADLKILGRKEFKMLLKWRLRVREIFGLPTKKTTKTPIAEEVAEVENMDEELKIQEELQR 364
Query: 359 LKYAMDQRKKREKKLLAKKRAKDKARKATGMQ--IDV-MQDDYTDHE--LFSLSSIKGKK 413
+K +KKRE++ +K+ K+ R M +D+ M+ + E +F L +I +
Sbjct: 365 IKEKELSKKKRERRKENEKKRKEIVRMQMNMTAPMDIGMEQEGPRGEGAMFRLKAIDQTE 424
Query: 414 DLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENY 473
L + + AE R +RD+ + S ++D+E ++LE LD Y+ Y
Sbjct: 425 ALRRIAKGKMAMLTEAE----ARKDRDS--GIGSSGETDDESDDDGDRLERELDNMYDQY 478
Query: 474 VAKRGGSTMQRKRAKKAYAQE-DQLSEG--------DEDEDTM---HTSYDSDKDQGDLD 521
+R + + RAKKA + D+ EG +DED+ +S DSD ++
Sbjct: 479 -KERKMAADAKYRAKKARQEHADEEWEGVSASEKGDSDDEDSALEEDSSDDSDAEERGDT 537
Query: 522 ANPLMVPLD----DGIRPTQEEITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKH 577
+ PL+ LD DG ++ +FSQ++F G D + +++A +
Sbjct: 538 SKPLIRDLDNTPQDGTGLSKR--ARGFFSQDVFQSIP--------GLLDVPEEEEEASED 587
Query: 578 SIPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTK-- 635
+P +++ P S + S GDFE+V +D +E+E + D +
Sbjct: 588 EVP-TIQEQKKKHKEKPASKDEEGS---GDFEVV-----KRHEDDDWEETEKKTKDGRPN 638
Query: 636 -----AEILACAKKMLR-KKQREQILDDAYNRYMFDD-DGLPDWFLEEERRHRQAIRPVT 688
AE + A ++ R +K I+D+ YN+Y F D DGLPDWFL++ER+H + +P+T
Sbjct: 639 IDIITAEAMTLAHQLARGEKSAHDIIDEGYNKYAFKDRDGLPDWFLDDERKHDKPHKPIT 698
Query: 689 KEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRK 748
KE AA+K + + +ARP KKVAEA+ARKK R+LEK++KKA++++ +S++ K
Sbjct: 699 KEAAAAIKEKLRAYNARPIKKVAEARARKKLKQARRLEKLKKKADLLASDEGMSEKEKAT 758
Query: 749 QIEQLYKSAVPKRPKKEYVVAKKGVQVRAG--------KGKV-LVDPRMKKDSR 793
I +L SA ++ +++ V K V V G KG+ +VDPRMKK+ R
Sbjct: 759 SIAKLL-SAAARKKQRQPVKVVKAVGVNRGIAGRPKGVKGRYKMVDPRMKKEMR 811
>gi|358401197|gb|EHK50503.1| hypothetical protein TRIATDRAFT_157949 [Trichoderma atroviride IMI
206040]
Length = 826
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 295/824 (35%), Positives = 462/824 (56%), Gaps = 47/824 (5%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K+ FL S +LDLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAEVMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V SL++G+DL PI PI ++ + DIT +CRA +++ ++ D VLHDG+PNVG
Sbjct: 68 VNSLIVGVDLAPIKPIPRVITFQSDITTEKCRATIRQHLKTWKA---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AWAQ++ +Q L + S+KLAT+FL GTFVTKVFRS+DY+ +L+ L QLF KVE KP
Sbjct: 125 AWAQDSFNQAELALQSMKLATEFLVEGGTFVTKVFRSKDYNPLLWVLNQLFTKVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ YKAP +DPR LD + +F P V +KR RDGY
Sbjct: 185 SSRNVSAEIFVVCRGYKAPKHMDPRFLDPRSVFAELSGAAPNNEAKVYNPEVKKRKRDGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD T K A+ FI +N+P+ ILGS I+F GD A +A+ H TT E++
Sbjct: 245 EEGDWTQFKEVSASAFIQTNDPIAILGSSNKISFAQAPNGDIALAALDKHPETTPEIRQC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEE 358
CDDL+VLG+++FK LLKWR+++++ F + K + S G D + R+ E++
Sbjct: 305 CDDLKVLGRKEFKLLLKWRLRVREIFGLSTKKSTAPEVSEEVVGVESMDEELRIQEELQA 364
Query: 359 LKYAMDQRKKREKKLLAKKRAKDKARKATGMQ--IDVMQDDYTDHELFSLSSIKGKKDLA 416
+K + + +KKREK+ +K+ ++ R M +D+ ++ ++ S+K
Sbjct: 365 MKDSENSKKKREKRKENEKKRREIIRMQLNMMAPMDIGMEESGPQGEGAMFSLKRMDKTN 424
Query: 417 AVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENYVAK 476
+ A +S+D P+ +T + ++SD E ++ LE+ LD YE Y +
Sbjct: 425 GMNRFTRGKMAVVSNSKDSNPD-ETLAATADPVESDSE----EDDLEKDLDAMYEQY-RE 478
Query: 477 RGGSTMQRKRAKKAYAQE----------DQLSEGDEDEDTMHTSYDSDKDQGDLDANPLM 526
R T + RAKK + D+ +E D E D D A L+
Sbjct: 479 RKLETDTKYRAKKVRKEHGDDEWEGLSADEKAESDASEFEEEDDTSDDDDDESGPAAGLL 538
Query: 527 VPLDDGIRPTQEEITNK---WFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKA 583
LD Q+ ++ + +F+Q+IF E + LG+ + + K ++ EKA
Sbjct: 539 TDLDGSAEEIQDGLSKRAAAFFNQDIFKEITEGSLLGENDATVQASGTKTRQQTLPTEKA 598
Query: 584 KQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGAD--SSDDSSSDESEDEEVDTKAEILAC 641
Q + + ++ + S + FE+V A D +D SD D ++ T AE +
Sbjct: 599 TQSVTLNGV---ASDDDESMDDNGFEVVRAENDDWEEADKRRSDGRLDIDIIT-AEAMTL 654
Query: 642 AKKMLR-KKQREQILDDAYNRYMF-DDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQF 699
A ++ +K +DD +N+ F D DGLPDWF+++E +H + +P+TK A+K +
Sbjct: 655 AHQLATGQKTTHDAIDDGFNKRAFRDRDGLPDWFMDDEGKHDKPQKPITKAAAMAIKEKL 714
Query: 700 KEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVP 759
+ +ARP KKV EAKARKK ++ EK++KK+++++ ++++ K + I +L A
Sbjct: 715 RAFNARPIKKVREAKARKKFKTAQRFEKLKKKSDMLAADEGMTEKEKAESISKLISKAGK 774
Query: 760 KRPKK--EYVVAK---KGVQVR--AGKGKV-LVDPRMKKDSRTH 795
++P++ + VVAK +G+Q R KG+ +VD RMKK+ R
Sbjct: 775 QKPRQPAKLVVAKGLNRGIQGRPKGVKGRYRIVDARMKKELRAQ 818
>gi|119478916|ref|XP_001259487.1| rRNA methyltransferase Spb1, putative [Neosartorya fischeri NRRL
181]
gi|119407641|gb|EAW17590.1| rRNA methyltransferase Spb1, putative [Neosartorya fischeri NRRL
181]
Length = 794
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 307/827 (37%), Positives = 459/827 (55%), Gaps = 85/827 (10%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+YRLAKE GYR+RA++KL+QL+ K+ FL S +LDLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYRLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
S+++G+DL PI PI ++ + DIT +CRA +++ ++ D VLHDG+PNVG
Sbjct: 68 TQSIIIGVDLAPIKPIPRVITFQSDITTEKCRATIRQHLKHWKA---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A SQ LV+ S+KLAT+FL GTFVTKVFRS+DY+ +L+ KQLF VE KP
Sbjct: 125 AWVQDAFSQAELVLQSMKLATEFLVEGGTFVTKVFRSKDYNPLLWVFKQLFTSVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ +KAP +IDP+ LD K++F P V K+KR R+GY
Sbjct: 185 SSRNVSAEIFVVCRGFKAPKRIDPKFLDPKHVFAELTDATPNNEARVFNPEKKKRKREGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD T K T+FI + +P+ ILG+ ++F GD A + + E TT+E++
Sbjct: 245 EEGDYTQFKEIPVTEFINTTDPIAILGTYNKLSFEQSPGGDLALATLNRLEETTDEIRTC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFS-----SAEKATVPASAS--APTEGENEEDADNR 351
C+DL++LGK++F++LL+WR+++++ F K P + AP + E + +
Sbjct: 305 CEDLKILGKKEFRNLLRWRLKVREKFGLVVKKGQAKTDEPEEVAEVAPMDEELAIQEELQ 364
Query: 352 VLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQ-----DDYTDHELFSL 406
L E E K ++RK+ EKK K+ + + T M I + Q +D T FSL
Sbjct: 365 RLQEKESSKRKKERRKENEKK--RKEIIRMQMHMTTPMDIGMEQLGPGGEDAT----FSL 418
Query: 407 SSIK--GKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEE 464
++ G +D+ A V DSED++ D + +QLE
Sbjct: 419 KRVERDGARDVIA----SGKVAEIESDSEDDQTGSDDESDDEG------------DQLER 462
Query: 465 VLDQAYENYVAKRG--GSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDA 522
LD YE Y +R S ++ K+A+K Y E DE + + + D++ + A
Sbjct: 463 ELDSLYEQYQERREDRDSKVRAKKARKDY-------EADEWDGFSDSDKEDDEESEEDGA 515
Query: 523 NPLMV---PLDDGIRPTQEEITNKWFSQEIFAEAVQNGDLGKLGSEDETQV-DKQAEKHS 578
+ +V P G ++ + +F Q+IF D+ S E Q DK A++ S
Sbjct: 516 SQAVVKPAPPKSGTLSSKAAM---FFDQDIFQGLGDVDDVEDDDSAIEMQEDDKSAKRGS 572
Query: 579 IPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEI 638
+ EK K A A Q +EV D E + DD + + AE
Sbjct: 573 VLEKQAPKDAKKKA-------QATEVFSDSE------PEEPDDPRKKNGQLDIDIITAEA 619
Query: 639 LACAKKMLRKKQREQ-ILDDAYNRYMFDD-DGLPDWFLEEERRHRQAIRPVTKEEIAAMK 696
+A A++M +++ Q I+DD +NRY F D DGLP+WFL++E +H + RP+TK AA+K
Sbjct: 620 MALAQQMATGEKKSQDIVDDGFNRYTFRDVDGLPEWFLDDENKHSKPQRPITKAAAAAIK 679
Query: 697 AQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKS 756
+ + I+ARP KKV EAK RKK A ++LEK+RKK+ +++D +S+R K + I +L
Sbjct: 680 EKLRAINARPIKKVMEAKGRKKMKAAQRLEKLRKKSALLADDEALSERDKSQAIAKLMSK 739
Query: 757 A--VPKRPKKEYVVAK---KGV--QVRAGKGKV-LVDPRMKKDSRTH 795
A + + + VVAK +G+ + R KGK +VD RMKKD R
Sbjct: 740 AVKKKPKQQVKLVVAKGANRGISGRPRGVKGKYKIVDSRMKKDIRAQ 786
>gi|121713778|ref|XP_001274500.1| rRNA methyltransferase Spb1, putative [Aspergillus clavatus NRRL 1]
gi|119402653|gb|EAW13074.1| rRNA methyltransferase Spb1, putative [Aspergillus clavatus NRRL 1]
Length = 796
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 315/845 (37%), Positives = 460/845 (54%), Gaps = 119/845 (14%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+YRLAKE GYR+RA++KL+QL+ K+ FL S +LDLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYRLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
S+++G+DL PI PI ++ + DIT +CRA +++ ++ D VLHDG+PNVG
Sbjct: 68 TQSIIVGVDLAPIKPIPRVITFQSDITTEKCRATIRQHLKHWKA---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A SQ LV+ S+KLAT+FLA GTFVTKVFRS+DY+ +L+ KQLF VE KP
Sbjct: 125 AWVQDAFSQAELVLQSMKLATEFLAEGGTFVTKVFRSKDYNPLLWVFKQLFTSVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEP--RKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ +KAP +IDP+ LD K++F VE V K+KR RDGY
Sbjct: 185 SSRNVSAEIFVVCRGFKAPKRIDPKFLDPKHVFAELVETSHNNEARVFNPEKKKRKRDGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD T K T+FI + +P+ ILGS +++F GD A + + E TTEE+K
Sbjct: 245 EEGDYTQHKEIPVTEFINTTDPIAILGSYNTLSFDQAPGGDLALATLNRLEDTTEEIKTC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENE------EDADNRV 352
C DL+VLGK++F++LL+WR+++++ F V + TE E D + +
Sbjct: 305 CQDLKVLGKKEFRNLLRWRLRVREKF-----GLVVKKGQSKTEDPEEVAEVAPMDEELAI 359
Query: 353 LNEMEELKYAMDQRKKREKKLLAKKRAKDKAR----KATGMQIDVMQ-----DDYTDHEL 403
E++ LK ++K+E++ +K+ K+ R T M I + Q DD T
Sbjct: 360 QEELQRLKEKESSKRKKERRKENEKKRKEIVRMQMNMTTPMDIGMEQLGPGGDDMT---- 415
Query: 404 FSLSSI--KGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQ 461
FSL + +G +D+ A AE D + SD + D+ R+ D
Sbjct: 416 FSLKRVEREGARDVIA-------SGKVAEIESDSDDDLSDSGSEESDDEGDQLERELD-- 466
Query: 462 LEEVLDQAYENYVAKRGG--STMQRKRAKKAYAQE--DQLSE-GDEDEDTMHTSYDSDKD 516
YE Y KR + ++ K+A+K Y + D S+ G EDE + S D+
Sbjct: 467 ------SLYEQYQEKRENRDTKLRAKKARKGYEADEWDGFSDSGKEDEGSDEESSDT--- 517
Query: 517 QGDLDANPLMVPLDDGIRPTQEEITNK---WFSQEIFAEAVQNGDLGKLGSEDETQVDKQ 573
P + P ++NK +F Q+IF + DL + ED
Sbjct: 518 ---------ATPAAKAVLPHSGALSNKAAMFFDQDIFQDL---EDLDDVEGEDSA----- 560
Query: 574 AEKHSIPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVD 633
E H + AK++ A++ K +V E DSSD SE EE D
Sbjct: 561 IELHENDKPAKKEPASEKKSAKDIKKKVQATE-----------DSSD------SEPEEFD 603
Query: 634 -------------TKAEILACAKKMLRKKQREQ-ILDDAYNRYMF-DDDGLPDWFLEEER 678
AE +A A++M +++ Q I+DD +NRY F D DGLP+WFL++E
Sbjct: 604 DPRKQNGQLDIDIITAEAMALAQQMATGEKKSQDIVDDGFNRYAFRDSDGLPEWFLDDET 663
Query: 679 RHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQ 738
+H + RP+TK AA+K + + I+ARP KKV EAK RKK A ++LEK+RKK+ +++D
Sbjct: 664 KHSKLQRPITKAAAAAIKEKMRAINARPIKKVMEAKGRKKMKAAQRLEKLRKKSALLADD 723
Query: 739 ADISDRSKRKQIEQLYKSA--VPKRPKKEYVVAK---KGV--QVRAGKGKV-LVDPRMKK 790
+S+R K + I +L A + + + VVAK +G+ + R KGK +VD RMKK
Sbjct: 724 EALSERDKSQAISKLMSKAVKKKPKQQVKLVVAKGANRGISGRPRGVKGKYKIVDSRMKK 783
Query: 791 DSRTH 795
D R
Sbjct: 784 DIRAQ 788
>gi|119174478|ref|XP_001239600.1| hypothetical protein CIMG_09221 [Coccidioides immitis RS]
gi|392869799|gb|EAS28325.2| AdoMet-dependent rRNA methyltransferase spb1 [Coccidioides immitis
RS]
Length = 816
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 291/833 (34%), Positives = 470/833 (56%), Gaps = 76/833 (9%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K+ FL S +LDLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
SL++G+DL PI PI ++ + DIT +CRA +++ ++ D VLHDG+PNVG
Sbjct: 68 TESLIVGVDLAPIKPIPRVITFQSDITTDKCRATIRQHLKTWKA---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A SQ L + S+KLAT+FL GTFVTKVFRS+DY+S+L+ KQLF VE KP
Sbjct: 125 AWVQDAFSQAELALQSLKLATEFLVAGGTFVTKVFRSKDYNSLLWVFKQLFTSVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ +KAP ++DP+ LD +++F P V K+KR R+GY
Sbjct: 185 SSRNVSAEIFVVCRGFKAPKRMDPKFLDPRHVFAELQDPTPNNEAKVFNPEKKKRKREGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD T K T+FI + +P+ ILG+ +++F GD A + ++ TT+E+++
Sbjct: 245 EEGDYTQHKEIPVTEFINTTDPIAILGTYNTLSFHQSPSGDLALATLERLPETTDEIRSC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSA-EKATVPASASAPTEGENEEDADNRVLNEME 357
C+DL+VLGK++F+ LL+WR+++++ F A +K A S D + + EM+
Sbjct: 305 CEDLKVLGKKEFRTLLRWRLKVREQFGLAVKKGAKKAEESEEVAEIEPMDEELAIQEEMQ 364
Query: 358 ELKYAMDQRKKREKKLLAKKRAKDKARKATGM--QIDVMQDDYTDHELFSLSSIKGKKDL 415
L+ RKK+E++ +++ K+ R M D+ + ++ SIK
Sbjct: 365 RLQEHESSRKKKERRRENERKQKEIVRLQMHMITPTDIGMEQSGPMGEGAMFSIK----- 419
Query: 416 AAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENYVA 475
+ + N + D + D + +SD+ SD+E +++LE LD YE Y
Sbjct: 420 -PITREGATRNITSGKMVDVQSEEDEESSATSDVASDDE----EDRLERELDAMYEKYQE 474
Query: 476 KRG--GSTMQRKRAKKAYAQEDQ--LSEGDEDEDTMHTSYDSDKDQGDLDANPLMVPLDD 531
R S ++ K+A+K E+ S+ D++ D + +D D+ A P +
Sbjct: 475 DREERDSKLRAKKARKGLETEEWEGFSDSDKESDRL-----TDDDEDAPQAQPGI----- 524
Query: 532 GIRPTQEE-ITNK---WFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKAKQK- 586
+R Q ++NK +F Q++F LG E++ + ++ K + E+ ++
Sbjct: 525 -LRNGQANGLSNKAALFFDQDLFQ------GLGNEDDEEDEEGEEAERKQNPSEQDEETD 577
Query: 587 MANDAAGPKSTHNQVSEVEGDFEIVPA----------PGADSSDDSSSDESEDE---EVD 633
ND+ ++T N E + + +PA P A+ ++ D E ++D
Sbjct: 578 DDNDSEDYETTDN---ESKMSVDSLPATKKQSGRSSKPNAEGFEEQKDDPRTKEGKLDID 634
Query: 634 -TKAEILACAKKMLR-KKQREQILDDAYNRYMFDD-DGLPDWFLEEERRHRQAIRPVTKE 690
AE +A A++M +K ++DD +N+Y F D DGLP+WFL++E +H + +RP+T
Sbjct: 635 IITAEAMALAQQMATGEKTSADVVDDGFNKYAFRDIDGLPEWFLDDENKHSKPLRPITAA 694
Query: 691 EIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQI 750
AA++ + + I+ARP KKV EAK RKK ++LEK++KK+ ++++ +S+R K + I
Sbjct: 695 AAAAIREKMRAINARPIKKVREAKGRKKFKEAQRLEKLKKKSALLAEDEGVSERDKAQTI 754
Query: 751 EQLYKSAVPKRPKK--EYVVAKKGVQVRAG-----KGKV-LVDPRMKKDSRTH 795
++ A K+PK+ + VVAK G + +G KGK +VD R+KKD R
Sbjct: 755 ARMMARATKKKPKQNVKLVVAKGGNRGISGRPRGVKGKYKIVDARLKKDVRAQ 807
>gi|392597296|gb|EIW86618.1| FtsJ-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 852
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 311/877 (35%), Positives = 458/877 (52%), Gaps = 124/877 (14%)
Query: 1 MGKVK---GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWM 57
MGK + GK RLDKYY+LAKE GYR+R+++KL+QL+ K+SFL S+ +DLCAAPGGW+
Sbjct: 1 MGKAQKKTGKGRLDKYYKLAKEQGYRARSAFKLIQLNRKYSFLESARCCIDLCAAPGGWL 60
Query: 58 QVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117
QVA + +P S+++G+DLVPI PI V+ DIT +CR +++ +++ D+VLH
Sbjct: 61 QVASKYMPANSIIVGVDLVPIRPIPRVVTFASDITTTQCRNQLRGELKDWKA---DVVLH 117
Query: 118 DGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFE 177
DG+PNVG AW Q+A SQ+ LV+ S+KLA +FL GTFVTKVFRS DY+++++ QLF
Sbjct: 118 DGAPNVGTAWVQDAYSQSELVLMSLKLAVEFLVKGGTFVTKVFRSADYNNLVWVFGQLFG 177
Query: 178 KVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ-----------GSVEPRK 226
KVE KP +SR+ SAEI+++ + AP +DP+ LD K++F+ G
Sbjct: 178 KVEATKPPSSRNVSAEIFVVCRDFLAPKHVDPKFLDPKHVFKDLSATVVEGAPGVASSHT 237
Query: 227 VVDVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIK 286
+V K++RHRDGY+DGD TL K A DFI S +P+ +LGSV I FG
Sbjct: 238 QANVFMPEKRRRHRDGYDDGDYTLFKKVGAGDFIRSPDPINVLGSVNQIIFGTEEEKGWL 297
Query: 287 DHELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTE----G 342
+TT ++KA CDDL+VLGK DFK LLKWRM +++ K T A TE
Sbjct: 298 TMRVTTPDIKANCDDLKVLGKGDFKALLKWRMSLREELGLDLKTT---HAEEFTEHAEVE 354
Query: 343 ENEEDADNRVLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQ----IDVMQDD- 397
E + D + ++ E+E L R KRE++ + + K R M I + Q D
Sbjct: 355 EEDVDEEVQIQAELERLNQESAARLKRERRRANEIKTKTIQRMQLQMTAPLDIGLEQHDA 414
Query: 398 ---YTDHELFSLSSIKGKKDL---AAVEYDDDDVNA----AAEDSEDERPNRDTQEHVSS 447
+ ++F L+ K + DDD++ A ED +D
Sbjct: 415 SLGFGQEDVFDLNGAAAAKLRLRDGTADLSDDDMSVGSHRALEDGQD------------- 461
Query: 448 DIDSDEERRKYDEQLEEVLDQAYENYVAKR----GGSTMQRKRAKKAYAQE-----DQLS 498
D+ SDEE+ + +LE +LD Y Y K ++ R K +E D+
Sbjct: 462 DLGSDEEQERKVSRLESMLDGMYGAYQEKLRERDAKFKVKEGRKKGGLLEEWNGVQDRKD 521
Query: 499 EGDEDEDTM----------HTSYDSDKDQGDLDANPLM--VPLDDGIRPTQE-------- 538
E ED D H S +D+ D D + P I+P Q+
Sbjct: 522 EDGEDSDASGGWDKMQEAKHAGDFSSEDESDEDGDSASDDEPPRKKIKPRQKVEEPNGVS 581
Query: 539 EITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKMANDAAGPKSTH 598
WF Q+IF ++ SE E + +E I A G
Sbjct: 582 RAAQFWFGQDIFQGM-------EVPSETEDSEQEGSEDEDI-----------AMGSGEVS 623
Query: 599 NQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTK------------AEILACAKKML 646
+Q S DFE VP D DD ++E E+V+ K AE + A++++
Sbjct: 624 DQASSSGSDFETVP---QDEEDDGEDWDAEGEDVNEKTRQKIQKRGLITAEAASIAERLV 680
Query: 647 -RKKQREQILDDAYNRYMFDD-DGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDA 704
R+ + +++D +NRY +D DGLP+WFL++E + + P++KE + A++A+ + +DA
Sbjct: 681 NRQTTKTHLINDGFNRYSLNDKDGLPEWFLDDEAKFYKPNIPISKEAVVALRARQRALDA 740
Query: 705 RPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYK-----SAVP 759
RP KK+AEAK RKK A ++LEK KKA ++ +D+S+R K +QIE L + +
Sbjct: 741 RPIKKIAEAKGRKKFKAAQRLEKAMKKAEGVNATSDLSEREKARQIETLLRKGAAKAKKK 800
Query: 760 KRPKKEYVVAKKGVQVR--AGKGK-VLVDPRMKKDSR 793
+ A KG++ R KGK +VD RM+K+ R
Sbjct: 801 EVKVVVAKGAHKGIKGRPKGVKGKYAMVDARMRKEVR 837
>gi|171692335|ref|XP_001911092.1| hypothetical protein [Podospora anserina S mat+]
gi|170946116|emb|CAP72917.1| unnamed protein product [Podospora anserina S mat+]
Length = 954
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 307/863 (35%), Positives = 468/863 (54%), Gaps = 96/863 (11%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K+ FL S VLDLCAAPG W QVA + +P
Sbjct: 103 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVVLDLCAAPGSWCQVAAETMP 162
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
S+++G+DL PI PI ++ + DIT +CRA ++ ++ D VLHDG+PNVG
Sbjct: 163 KDSIIIGVDLSPIKPIPKVITFQSDITTEKCRATIRTHLKTWKA---DCVLHDGAPNVGT 219
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q++ +Q L + S+KLAT+FL G FVTKVFRS+DY+S+L+ LKQLF KVE KP
Sbjct: 220 AWVQDSFNQAELALHSLKLATEFLIEGGAFVTKVFRSKDYNSLLWVLKQLFTKVEATKPP 279
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ + YKAP K+DPRLLD + +F+ P V +KR RDGY
Sbjct: 280 SSRNVSAEIFVVCLGYKAPKKLDPRLLDPRTVFEDVADAAPNNEAKVYNPEIKKRKRDGY 339
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD T K A++FI + +P+ ILG ++TF GD A +A+ TTEE++
Sbjct: 340 EEGDYTQYKEIAASEFIQTTDPIAILGQYNALTFKQATNGDVALAALDKLPETTEEIRTC 399
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEE 358
C DL+VLG+++FK LLKWR+++++ F K + AS + D + R+ E++
Sbjct: 400 CADLKVLGRKEFKLLLKWRLKVREIFGFPTKKSAKASLADEVAEVEPMDEEMRIQEELQR 459
Query: 359 LKYAMDQRKKREKKLLAKKRAKDKARKATGMQ--IDV---MQDDYTDHELFSLSSIKGKK 413
+ +KKRE++ + + K+ R M +D+ + + E+F L ++
Sbjct: 460 IADKEKGKKKRERRSANEAKTKEIMRMQMHMTAPMDIGMEQEGPRGEGEIFKLKAVDENG 519
Query: 414 DLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENY 473
L + V E E+ R + S D+D+E + ++LE LD Y+ Y
Sbjct: 520 ALRKIAKGKMVVI-----KEAEQKRRGFDSGIGSSGDTDDESDEDGDRLERELDGLYDQY 574
Query: 474 VAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYD---SDKDQGDLD--------- 521
+R + + RAKKA + D DE+ S D + D+ DL+
Sbjct: 575 -QERKSAADAKYRAKKARKEHD-------DEEWEGVSADEKGNSDDESDLEMESGSDSED 626
Query: 522 -------ANPLMVPLDDGIRPTQEEIT---NKWFSQEIFAEAVQNGDLGKLGSEDETQV- 570
PL+ L DG +E ++ N++F E+FA+ + + G E+E QV
Sbjct: 627 EDEMDVDEKPLISDL-DGKGKGKEGLSKRANRFFENEVFADILGEMEEEGDGEEEEVQVL 685
Query: 571 -DKQAEKHS---IPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDE 626
D++A + S IP +QK + E + FEIV P A+ D S E
Sbjct: 686 QDEEAAESSDDDIPSIEQQKKMRKE----AAAAAKKEKDNTFEIVKRPMAEEQDSDSDWE 741
Query: 627 SEDE-------------------------EVD-TKAEILACAKKMLR-KKQREQILDDAY 659
+ ++ ++D AE + A ++ R +K ++DD Y
Sbjct: 742 AVEKKKKKDAKPGMFSFHSRLDNILMRITDIDIVTAEAMTLAHQLARGEKTVHDVIDDGY 801
Query: 660 NRYMFDD-DGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKK 718
N+Y D DGLPDWFL++E++H + +P+TKE A+K + + +ARP KKVAEA+ARKK
Sbjct: 802 NKYALKDRDGLPDWFLDDEKKHDKPHKPITKEAAQAIKEKLRAYNARPIKKVAEARARKK 861
Query: 719 RVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKEYVVAK-----KGV 773
+KLEK++KKA+++ ++++ K I +L A K+ K V K +G+
Sbjct: 862 FKQAQKLEKLKKKADMLMGDEGLNEKEKASSISKLIAQANKKKRKAPVKVVKAAGANRGL 921
Query: 774 QVR--AGKGKV-LVDPRMKKDSR 793
Q R KG+ +VDPRMKK+ R
Sbjct: 922 QGRPKGVKGRYKMVDPRMKKEMR 944
>gi|303314341|ref|XP_003067179.1| FtsJ-like methyltransferase family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240106847|gb|EER25034.1| FtsJ-like methyltransferase family protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 816
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 290/831 (34%), Positives = 467/831 (56%), Gaps = 72/831 (8%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K+ FL S +LDLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
SL++G+DL PI PI ++ + DIT +CRA +++ ++ D VLHDG+PNVG
Sbjct: 68 TESLIVGVDLAPIKPIPRVITFQSDITTDKCRATIRQHLKTWKA---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A SQ L + S+KLAT+FL GTFVTKVFRS+DY+S+L+ KQLF VE KP
Sbjct: 125 AWVQDAFSQAELALQSLKLATEFLVAGGTFVTKVFRSKDYNSLLWVFKQLFTSVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ +KAP ++DP+ LD +++F P V K+KR R+GY
Sbjct: 185 SSRNVSAEIFVVCRGFKAPKRMDPKFLDPRHVFAELQDPTPNNEAKVFNPEKKKRKREGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD T K T+FI + +P+ ILG+ +++F GD A + ++ TT+E++
Sbjct: 245 EEGDYTQHKEIPVTEFINTTDPIAILGTYNTLSFHQSPSGDLALATLERLPETTDEIRNC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSA-EKATVPASASAPTEGENEEDADNRVLNEME 357
C+DL+VLGK++F+ LL+WR+++++ F A +K A S D + + EM+
Sbjct: 305 CEDLKVLGKKEFRTLLRWRLKVREQFGLAVKKGAKKAEESEEVAEIEPMDEELAIQEEMQ 364
Query: 358 ELKYAMDQRKKREKKLLAKKRAKDKARKATGM--QIDVMQDDYTDHELFSLSSIKGKKDL 415
L+ RKK+E++ +++ K+ R M D+ + ++ SIK
Sbjct: 365 RLQEHESSRKKKERRRENERKQKEIVRLQMHMITPTDIGMEQSGPMGEGAMFSIK----- 419
Query: 416 AAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENYVA 475
+ + N + D + D + +SD+ SD+E +++LE LD YE Y
Sbjct: 420 -PITREGATRNITSGKIVDVQSEEDEESSATSDVASDDE----EDRLERELDAMYEKYQE 474
Query: 476 KRG--GSTMQRKRAKKAYAQEDQ--LSEGDEDEDTMHTSYDSDKDQGDLDANPLMVPLDD 531
R S ++ K+A+K E+ S+ D++ D + SD D+ A P + L +
Sbjct: 475 DREERDSKLRAKKARKGLETEEWEGFSDSDKESDRL-----SDDDEDAPQAQPGI--LRN 527
Query: 532 GIRPTQEEITNK---WFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKMA 588
G ++NK +F Q++F LG E++ + + K ++ E+ ++
Sbjct: 528 G---QANGLSNKAALFFDQDLFQ------GLGNEDDEEDEEGREAERKQNLSEQDEESDD 578
Query: 589 NDAAGPKSTHNQVSEVEGDFEIVPAP----GADSSDDSSSDESEDEEVDTK--------- 635
++ + T + S++ D +PA G S + E + ++ TK
Sbjct: 579 DNDSEDYETTDNESKMSVD--SLPATKKQSGRSSKPNIEGFEEQKDDPRTKEGKLDIDII 636
Query: 636 -AEILACAKKMLR-KKQREQILDDAYNRYMFDD-DGLPDWFLEEERRHRQAIRPVTKEEI 692
AE +A A++M +K ++DD +N+Y F D DGLP+WFL++E +H + +RP+T
Sbjct: 637 TAEAMALAQQMATGEKTSADVVDDGFNKYAFRDIDGLPEWFLDDENKHSKPLRPITAAAA 696
Query: 693 AAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQ 752
AA++ + + I+ARP KKV EAK RKK ++LEK++KK+ ++++ +S+R K + I +
Sbjct: 697 AAIREKMRAINARPIKKVREAKGRKKFKEAQRLEKLKKKSALLAEDEGVSERDKAQTIAR 756
Query: 753 LYKSAVPKRPKK--EYVVAKKGVQVRAG-----KGKV-LVDPRMKKDSRTH 795
+ A K+PK+ + VVAK G + +G KGK +VD R+KKD R
Sbjct: 757 MMARATKKKPKQNVKLVVAKGGNRGISGRPRGVKGKYKIVDARLKKDVRAQ 807
>gi|169614552|ref|XP_001800692.1| hypothetical protein SNOG_10422 [Phaeosphaeria nodorum SN15]
gi|111060696|gb|EAT81816.1| hypothetical protein SNOG_10422 [Phaeosphaeria nodorum SN15]
Length = 836
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 300/843 (35%), Positives = 463/843 (54%), Gaps = 79/843 (9%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K++FL S ++DLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYNFLEKSKVLIDLCAAPGSWCQVASEVMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
SL++G+DL PI PI ++ + DIT +CRA +++ ++ D VLHDG+PNVG
Sbjct: 68 AQSLIVGVDLAPIKPIPRCITFQSDITTDKCRATLRQHLKHFKA---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A +Q LV+ S+KLAT+FL GTFVTKVFRS+DY+S+L+ QLF KVE KP
Sbjct: 125 AWVQDAFTQAELVLQSMKLATEFLVEGGTFVTKVFRSKDYNSLLWVFNQLFTKVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVE--PRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ YKAP +DP+ LD + +F E P V K+KR R GY
Sbjct: 185 SSRNVSAEIFVVCRGYKAPKNLDPKFLDARSVFAELAEPAPNNEAKVFNPEKKKRKRGGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD T ++FI + +P+ +LGS+ ++F GD A + I + TT+EV+
Sbjct: 245 EEGDWTQFHEVPVSEFIQTTDPIAMLGSLNKLSFEQPPNGDVAIATIDKLKETTKEVRNC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEE-------DADNR 351
C DL+VLG+ DFK LL+WR++++ F + K + A E +E D + +
Sbjct: 305 CADLKVLGRADFKRLLRWRLKVRDIFGFSAKKKEEEAEKAKDAEEGDEVAEIEDMDDEMK 364
Query: 352 VLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGM----QIDVMQ-DDYTDHELFSL 406
+ E+E LK + KK++++ +++ K+ R M +I + Q D +F+L
Sbjct: 365 IQEELERLKEKDSKSKKKQRRNENERKQKEIVRMQMNMTTPYEIGMEQAGPQGDDAMFAL 424
Query: 407 SSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVL 466
S+ L+ + A E ER + ++E +D + D LE L
Sbjct: 425 KSVDKAGALSRIAK-----GKMATIVERERADESSEEEQETDDEGD--------YLERDL 471
Query: 467 DQAYENYVAKRGGSTMQRKRAKKAYAQ---------EDQLSEGDEDEDTMHTSYDSDKDQ 517
D+ Y YV +R + RAK+A + D E DE+ + D
Sbjct: 472 DEMYGEYVEQRSARDA-KYRAKRAKNEGDDGEWNGFSDDGKEASSDEELVQDEDSDWSDD 530
Query: 518 GDLDANPLMVPLDDGIRPTQEEIT---NKWFSQEIF-----AEAVQNGDLGKLGSEDETQ 569
+ L+ LD+ P+ +T ++F Q+IF + ++ D + ED +
Sbjct: 531 EEDGPKGLITDLDNEA-PSNRPLTKRAERFFDQDIFKGIDGLDDLEEDDDSGIDVEDAME 589
Query: 570 VDKQAEKHSIPEKA-------KQKMANDAAGPKST--HNQVSEVEGDFEIVPAPGADSSD 620
VD + I E A K A AA P S+ +++ EV+ D + D
Sbjct: 590 VDVKEVPAPIAETALPTRPAKKASFAPAAADPDSSDDEDKIEEVKRD-----ETQWEQDD 644
Query: 621 DSSSDESEDEEVDTKAEILACAKKMLR-KKQREQILDDAYNRYMFDD-DGLPDWFLEEER 678
+ D ++ T AE + A +M KK + +LDD++NRY D DGLPDWFL++E
Sbjct: 645 MPMKNGKPDIDIIT-AEAMTLAHQMATGKKTKHDLLDDSFNRYSLRDVDGLPDWFLDDEN 703
Query: 679 RHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQ 738
RH + RPVT +A+K + + ++ARP KKV EA+ARKK A ++LEK++KK+ +++D+
Sbjct: 704 RHSKMQRPVTAAAASAIKEKLRALNARPIKKVREAQARKKFKAAQRLEKLKKKSALLADE 763
Query: 739 ADISDRSKRKQIEQLYKSAVPKRPKKE--YVVAK---KGVQVR--AGKGKV-LVDPRMKK 790
++++ K + I +L A K+PK++ VVA+ KG++ R KGK +VD R+KK
Sbjct: 764 EGMTEKEKAQSIARLMSRAAKKKPKQKVSVVVARGGNKGIKNRPKGTKGKYKMVDARLKK 823
Query: 791 DSR 793
D R
Sbjct: 824 DVR 826
>gi|328784537|ref|XP_003250462.1| PREDICTED: putative rRNA methyltransferase 3-like isoform 1 [Apis
mellifera]
Length = 844
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 309/883 (34%), Positives = 462/883 (52%), Gaps = 100/883 (11%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
GK+ GK R DK+Y+LAKE GYRSRA++KL+QL+ KF FL+ S +DLCAAPGGWMQVA
Sbjct: 5 GKI-GKQRKDKFYQLAKETGYRSRAAFKLIQLNRKFEFLQKSRVCIDLCAAPGGWMQVAR 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
Q +PV S+V+G+DL PI PI G +SL +DIT +CR + + E D+VLHDG+P
Sbjct: 64 QNMPVSSIVIGVDLFPIKPIPGCISLIEDITTDKCRVSITR---ELKTWKADVVLHDGAP 120
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG W +A Q L + ++K+AT FL G F+TKVFRS+DY +++ LKQLF+KV
Sbjct: 121 NVGKNWLHDAYQQIVLTLSALKMATHFLRSGGWFITKVFRSKDYHPLIWVLKQLFKKVHA 180
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHR 240
KP ASR+ SAEI+++ Y AP K+DP+ LD KY+F + +EP +++ TK+K
Sbjct: 181 TKPQASRTESAEIFVVCQYYIAPDKLDPKFLDPKYVFSELEIEPTNKLNIFNPTKKKDKV 240
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
+GY + D TL DFI N +E L + + I F D I +HE TT+E+K C
Sbjct: 241 EGYPENDYTLYHKLSVKDFIAHENVVEALQNTSEIVFDD---EIITNHEKTTKEIKECCK 297
Query: 301 DLRVLGKQDFKHLLKWRMQIKKAFSSAE-------KATVPASASAPTEGENEEDA-DNRV 352
D++VLGK+D ++L+ W IK++ E +AP E ED D ++
Sbjct: 298 DIKVLGKKDLRNLINWWKIIKESLKEKEPIDENTQNLLDETVETAPMSQEELEDIEDEQI 357
Query: 353 LNEMEELK--YAMDQRKKREKKLLAKKRAKDKARKAT---GMQIDVMQDDYTDHELFSLS 407
++EELK A D ++K++K +++ ++ G + +++ D ++FSL
Sbjct: 358 RKQIEELKENEARDLKRKKKKANKQRQKLNERLNLKMIHKGNEGPILEGD----DMFSLK 413
Query: 408 SIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEV-- 465
IK + L + D D N AE SDIDSD E++K + +
Sbjct: 414 EIKTHQQLENIM--DQDPNILAE----------------SDIDSDTEQKKTKRIIYKKDK 455
Query: 466 --LDQAYENY-VAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDA 522
LD + Y + + + L + D++ + + + DL+
Sbjct: 456 GHLDSSGLYYKSEDSEPDDSDDVSDNDSDSNKSDLGLNESDDENIKNIKKKNNTEEDLE- 514
Query: 523 NPLMVPLDDGIRPTQE-EITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPE 581
NPL+ LD + T+ WF ++IF D ++ ++DK E++ +
Sbjct: 515 NPLLTDLDHRDKKTKRIHKAELWFEKDIFKNLEDEKD-------EDFELDKMVEEYR--K 565
Query: 582 KAKQKMANDAAGPKSTHNQVSEVEG-----------------DFEIVPAPGADSSDDSSS 624
K + D + N++ + V S + S
Sbjct: 566 KGGHIIGEDISADSDKENKIKNHKNIKDDDENNNDLNNDDSDSDYDVNKMMKKSKKNEIS 625
Query: 625 DESEDEEVDTKA--------EILACAKKMLR-KKQREQILDDAYNRYMFDDDGLPDWFLE 675
D++ + +++K E LA +++ KK R ++D A+NRY F+D+ LPDWF++
Sbjct: 626 DKNNSQTINSKLKKRKHLSEEDLALGSLLIQSKKTRRDLIDSAWNRYAFNDEKLPDWFMQ 685
Query: 676 EERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVI 735
+E +H + + PV E + K + ++++ RP KKV EAKARKKR A+RKLEK +KK I
Sbjct: 686 DEEKHMKNVIPVPNELVNEYKKRVEDLNIRPIKKVIEAKARKKRRALRKLEKAKKKVESI 745
Query: 736 SDQADISDRSKRKQIEQLYKSAVPKRPKKE--YVVAKKGVQVRAG------KGKV-LVDP 786
D DIS++ K KQI+ LYK A K PKK+ YVV KK + + KG+ LVDP
Sbjct: 746 MDNTDISNKEKAKQIQTLYKKAY-KEPKKDVTYVVMKKHMTQKKTKRPPGVKGRYKLVDP 804
Query: 787 RMKKDSRTHGSGKARKGGSKKGNIGKARKGKGSVKASSKKGKK 829
RMKKD R K + K N GK +G K + KGKK
Sbjct: 805 RMKKDLRA-TKAKEKTKKRGKKNHGKPSQG----KPKNHKGKK 842
>gi|110760837|ref|XP_391900.3| PREDICTED: putative rRNA methyltransferase 3-like isoform 2 [Apis
mellifera]
Length = 817
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 309/858 (36%), Positives = 461/858 (53%), Gaps = 77/858 (8%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
GK+ GK R DK+Y+LAKE GYRSRA++KL+QL+ KF FL+ S +DLCAAPGGWMQVA
Sbjct: 5 GKI-GKQRKDKFYQLAKETGYRSRAAFKLIQLNRKFEFLQKSRVCIDLCAAPGGWMQVAR 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
Q +PV S+V+G+DL PI PI G +SL +DIT +CR + + E D+VLHDG+P
Sbjct: 64 QNMPVSSIVIGVDLFPIKPIPGCISLIEDITTDKCRVSITR---ELKTWKADVVLHDGAP 120
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG W +A Q L + ++K+AT FL G F+TKVFRS+DY +++ LKQLF+KV
Sbjct: 121 NVGKNWLHDAYQQIVLTLSALKMATHFLRSGGWFITKVFRSKDYHPLIWVLKQLFKKVHA 180
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHR 240
KP ASR+ SAEI+++ Y AP K+DP+ LD KY+F + +EP +++ TK+K
Sbjct: 181 TKPQASRTESAEIFVVCQYYIAPDKLDPKFLDPKYVFSELEIEPTNKLNIFNPTKKKDKV 240
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
+GY + D TL DFI N +E L + + I F D I +HE TT+E+K C
Sbjct: 241 EGYPENDYTLYHKLSVKDFIAHENVVEALQNTSEIVFDD---EIITNHEKTTKEIKECCK 297
Query: 301 DLRVLGKQDFKHLLKWRMQIKKAFSSAE-------KATVPASASAPTEGENEEDA-DNRV 352
D++VLGK+D ++L+ W IK++ E +AP E ED D ++
Sbjct: 298 DIKVLGKKDLRNLINWWKIIKESLKEKEPIDENTQNLLDETVETAPMSQEELEDIEDEQI 357
Query: 353 LNEMEELK--YAMDQRKKREKKLLAKKRAKDKARKAT---GMQIDVMQDDYTDHELFSLS 407
++EELK A D ++K++K +++ ++ G + +++ D ++FSL
Sbjct: 358 RKQIEELKENEARDLKRKKKKANKQRQKLNERLNLKMIHKGNEGPILEGD----DMFSLK 413
Query: 408 SIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEE--- 464
IK + L + D D N AE SDIDSD E++K + +
Sbjct: 414 EIKTHQQLENIM--DQDPNILAE----------------SDIDSDTEQKKTKRIIYKKDK 455
Query: 465 -VLDQAYENY-VAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDA 522
LD + Y + + + L + D++ + + + DL+
Sbjct: 456 GHLDSSGLYYKSEDSEPDDSDDVSDNDSDSNKSDLGLNESDDENIKNIKKKNNTEEDLE- 514
Query: 523 NPLMVPLDDGIRPTQE-EITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPE 581
NPL+ LD + T+ WF ++IF D ++ ++DK E++ +
Sbjct: 515 NPLLTDLDHRDKKTKRIHKAELWFEKDIFKNLEDEKD-------EDFELDKMVEEYR--K 565
Query: 582 KAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILAC 641
K + D + N++ + + ++DDS SD + + + E LA
Sbjct: 566 KGGHIIGEDISADSDKENKIKNHKNIKDDDENNNDLNNDDSDSDYDKRKHLS--EEDLAL 623
Query: 642 AKKMLR-KKQREQILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFK 700
+++ KK R ++D A+NRY F+D+ LPDWF+++E +H + + PV E + K + +
Sbjct: 624 GSLLIQSKKTRRDLIDSAWNRYAFNDEKLPDWFMQDEEKHMKNVIPVPNELVNEYKKRVE 683
Query: 701 EIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPK 760
+++ RP KKV EAKARKKR A+RKLEK +KK I D DIS++ K KQI+ LYK A K
Sbjct: 684 DLNIRPIKKVIEAKARKKRRALRKLEKAKKKVESIMDNTDISNKEKAKQIQTLYKKAY-K 742
Query: 761 RPKKE--YVVAKKGVQVRAG------KGKV-LVDPRMKKDSRTHGSGKARKGGSKKGNIG 811
PKK+ YVV KK + + KG+ LVDPRMKKD R K + K N G
Sbjct: 743 EPKKDVTYVVMKKHMTQKKTKRPPGVKGRYKLVDPRMKKDLRA-TKAKEKTKKRGKKNHG 801
Query: 812 KARKGKGSVKASSKKGKK 829
K +G K + KGKK
Sbjct: 802 KPSQG----KPKNHKGKK 815
>gi|367024317|ref|XP_003661443.1| hypothetical protein MYCTH_2300833 [Myceliophthora thermophila ATCC
42464]
gi|347008711|gb|AEO56198.1| hypothetical protein MYCTH_2300833 [Myceliophthora thermophila ATCC
42464]
Length = 841
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 301/849 (35%), Positives = 466/849 (54%), Gaps = 86/849 (10%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K+ FL S VLDLCAAPG W QV + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVVLDLCAAPGSWCQVCAETMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
S+++G+DL PI PI ++ + DIT +CRA ++ ++ D VLHDG+PNVG
Sbjct: 68 KDSIIIGVDLAPIKPIPKVITFQSDITTEKCRATIRTHLKTWKA---DCVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q++ +Q L + S+KLAT+FL GTFVTKVFRS+DY+S+L+ L QLF KVE KP
Sbjct: 125 AWVQDSYNQAELALHSLKLATEFLIEGGTFVTKVFRSKDYNSLLWVLNQLFTKVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVE--PRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ YKAP +IDPRLLD + +F+ + P V +KR R+GY
Sbjct: 185 SSRNVSAEIFVVCRGYKAPKRIDPRLLDPRSVFEDLADPAPNNEAKVYNPEVKKRKREGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD T K A++FI + +PL ILG +TF GD A +A+ TT+E++
Sbjct: 245 EEGDYTQYKEIAASEFIQTTDPLAILGQYNRLTFEQPKNGDVALAALDKLPETTQEIRHC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEE 358
C DL+VLG++DFK LLKWR+++++ F K T A D + ++ E++
Sbjct: 305 CADLKVLGRKDFKLLLKWRLKVREIFGLPTKKTTKAPLVEEVAEVENMDEELKIQEELQR 364
Query: 359 LKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHE-------LFSLSSIKG 411
+K +KK+E++ +++ K+ R M + D + E +F L SI
Sbjct: 365 IKDKELAKKKKERRKENERKHKEIVR--MQMNMTAPMDIGMEQEGPRGADAMFRLKSIDQ 422
Query: 412 KKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYE 471
+ L + A D + +RD+ + S ++D+E + ++LE LD YE
Sbjct: 423 TEALRRIAKG----KMATITEVDAKKDRDS--GIGSSGETDDESDEELDRLERELDNMYE 476
Query: 472 NYVAKRGG--STMQRKRAKKAY---------AQEDQLSEGDEDEDTMHTSYDSDKDQGDL 520
+Y ++ + + K+A+K Y A E + S+ D++ +S DSD ++
Sbjct: 477 SYKERKAAADAKYRAKKARKEYGDDEWEGVSASEKEESDDDDEILEEESSDDSDAEERGD 536
Query: 521 DANPLMVPLD----DGIRPTQEEITNKWFSQEIF---------------AEAVQNGDLGK 561
+ PL+ LD DG ++ +F+QEIF + +N D G
Sbjct: 537 TSKPLLRDLDNTPQDGAGLSKR--ARGFFNQEIFRSIPGLLDVPEDTEGEDEAKNADEGA 594
Query: 562 LGSEDETQVDKQAEKHSIPEKAKQ-KMANDAAGPKSTHNQVSEVEGDFEIV-----PAPG 615
+ +++ D +P +Q KM + A K E E DFEIV
Sbjct: 595 ASNGEDSDND-------VPTIEEQKKMRKEKAARKE-----KEKEDDFEIVKQDQDSDDD 642
Query: 616 ADSSDDSSSDESEDEEVD-TKAEILACAKKMLR-KKQREQILDDAYNRYMFDD-DGLPDW 672
+ + + +D AE + A ++ R +K + ++D+ YN+Y F D DGLPDW
Sbjct: 643 WEEKEKKKKTKDGKPNIDIITAEAMTLAHQLARGEKSKHDLIDEGYNKYAFKDRDGLPDW 702
Query: 673 FLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKA 732
FL++E +H + +P+TKE AA+K + + +ARP KKVAEA+ARKK +KLEK++KKA
Sbjct: 703 FLDDEAKHDKPHKPITKEAAAAIKEKLRAYNARPIKKVAEARARKKLKQAQKLEKLKKKA 762
Query: 733 NVISDQADISDRSKRKQIEQLYKSAVPKRPKKEYVVAK-----KGV--QVRAGKGKV-LV 784
++++ +S++ K I +L +A K+ K V K +G+ + R KG+ +V
Sbjct: 763 DLLAGDEGMSEKEKATSIAKLMSAAARKKRKPPVKVIKATGVNRGISGRPRGVKGRYKMV 822
Query: 785 DPRMKKDSR 793
DPRMKK+ R
Sbjct: 823 DPRMKKEMR 831
>gi|295670405|ref|XP_002795750.1| AdoMet-dependent rRNA methyltransferase spb1 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226284835|gb|EEH40401.1| AdoMet-dependent rRNA methyltransferase spb1 [Paracoccidioides sp.
'lutzii' Pb01]
Length = 825
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 305/867 (35%), Positives = 469/867 (54%), Gaps = 140/867 (16%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K+ FL S +LDLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
SL++G+DL PI PI ++ + DIT +CRA +++ + D VLHDG+PNVG
Sbjct: 68 SQSLIVGVDLAPIKPIPKVITFQSDITTDKCRATIRQHFKSWKA---DTVLHDGAPNVGV 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A SQ LV+ S+KLAT+FL P GTFVTKVFRS+DY+ +L+ KQLF V+ KP
Sbjct: 125 AWVQDAFSQAELVLQSLKLATEFLTPGGTFVTKVFRSKDYNPLLWVFKQLFATVKATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVD--VLRGTKQKRHRDGY 243
+SR+ SAEI+++ + +KAP IDP+ LD K++F +P + V K+KR RDGY
Sbjct: 185 SSRNVSAEIFVVCLGFKAPKHIDPKFLDAKHVFAELQDPTPNYEAKVFNPEKKKRKRDGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+G+ K ++FI + +P+ ILG ++F D A + +K TT+E++
Sbjct: 245 EEGNYIQFKEIPVSEFINTTDPISILGEYNKLSFEQSSGADLALATLKRLPETTKEIRLC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAF-------SSAEKATVPASASAPTEGENEEDADNR 351
C+DL+VLGK++F++LL+WR+++++ F SS + + P E D R
Sbjct: 305 CEDLKVLGKKEFRNLLRWRIKVREKFGLAVKKGSSKPVESEEVAEVEPMGEELAIQEDLR 364
Query: 352 VLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDD-YTDHELFSLSSIK 410
L E E + ++RK+ E+K K+ + + T M I Q + + ++FSL I
Sbjct: 365 HLREKETSRKKRERRKENERK--QKEIVRMQMHMTTPMDIGTEQSGPFGEGQMFSLKPIN 422
Query: 411 GKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAY 470
+A + VN +ED E+ S+ ID + + + + E Y
Sbjct: 423 RTGAVANIT-SGKMVNVESEDEEE-----------SATIDEESDEEEDRLERELD--AMY 468
Query: 471 ENYVAKRG--GSTMQRKRAKKAYAQE------DQLSEGDEDEDTMHTSYDSDKDQGDLDA 522
E Y A R + ++ KRA+K + E D EGDED D DA
Sbjct: 469 ERYQANREERDAKLRAKRARKDFEAEEWEGISDFEKEGDEDTDN--------------DA 514
Query: 523 NPLMVPLDDGIRPTQEE--ITNK---WFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKH 577
P++VP RP+ + ++NK +F Q+IF LG LG ED+ Q D + +
Sbjct: 515 -PILVP-----RPSVDNKGLSNKAAMFFDQDIFQ------GLGDLGGEDDEQDDGEGRQD 562
Query: 578 SIPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDES---------- 627
+D A P+ N VS+ EGD+ + ++SSDD + +
Sbjct: 563 ----------GDDIAAPEQ-DNIVSD-EGDY----SDASESSDDVPTTQEKPKLNNKQTE 606
Query: 628 -------------------EDEEVDTK------------AEILACAKKMLR-KKQREQIL 655
E+E+ D + AE + A++++ +K ++
Sbjct: 607 KRGSKHEKAAKDNNISPGFEEEQQDPRKKNGQLDIDIITAEAMTLAQQIVTGEKTSHDVV 666
Query: 656 DDAYNRYMFDDD-GLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAK 714
DD +N+Y F D GLP+WFL++E RH + +P+T AA++ + + I+ARP KKV EAK
Sbjct: 667 DDGFNKYTFRDTYGLPEWFLDDECRHSKPQQPITAAAAAAIREKLRAINARPIKKVQEAK 726
Query: 715 ARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKK--EYVVAK-- 770
RKK A ++LEK+RKK+ ++++ +S++ K + I ++ A+ K+PK+ + VVAK
Sbjct: 727 GRKKFKAAKRLEKLRKKSALLAEDEAMSEKDKAQTIARMMSRALKKKPKQSVKLVVAKGS 786
Query: 771 -KGVQVR--AGKGKV-LVDPRMKKDSR 793
KG+ R KG+ +VD RMKKD R
Sbjct: 787 NKGIAGRPKGVKGRYKIVDARMKKDVR 813
>gi|293333905|ref|NP_001168052.1| hypothetical protein [Zea mays]
gi|223945719|gb|ACN26943.1| unknown [Zea mays]
gi|413946566|gb|AFW79215.1| hypothetical protein ZEAMMB73_519366 [Zea mays]
Length = 298
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 198/298 (66%), Positives = 246/298 (82%), Gaps = 3/298 (1%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK KGK R DK+Y LAKE GYRSRA++KL+QLD++F FL ++ +VLDLCAAPGGW+QVA
Sbjct: 1 MGKAKGKQRQDKFYHLAKEQGYRSRAAFKLLQLDARFHFLPTARSVLDLCAAPGGWVQVA 60
Query: 61 VQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
V PVG+ V+G+DLVPI PIRGA SL +DIT +CRA V+++M+ +GV AFD+VLHDGS
Sbjct: 61 VNHAPVGAFVVGVDLVPIRPIRGAHSLTEDITATKCRAAVRRLMDSNGVSAFDVVLHDGS 120
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
PNVGGAWAQEA SQ+ALVID+++LAT FLAPKG F+TKVFRSQDY++++YCLKQLFEKVE
Sbjct: 121 PNVGGAWAQEATSQSALVIDALRLATMFLAPKGAFITKVFRSQDYNAIMYCLKQLFEKVE 180
Query: 181 VDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRHR 240
KP ASRS SAEIY++ +KYKAPAKI P LLD+K+LF E K DVL G ++KRHR
Sbjct: 181 ATKPTASRSTSAEIYIICLKYKAPAKIQPELLDIKHLFSVVPEQTKSRDVLDG-RKKRHR 239
Query: 241 DGYEDGDTTLRKVSLATDFIWSNN--PLEILGSVTSITFGDPACSAIKDHELTTEEVK 296
DGYE+G+TTLRKV LA+DFIWS+ PLE LGS +I+F +P IK+HELTT++V+
Sbjct: 240 DGYEEGNTTLRKVGLASDFIWSDTQAPLEFLGSYNAISFDNPESLPIKNHELTTDDVR 297
>gi|402085558|gb|EJT80456.1| AdoMet-dependent rRNA methyltransferase SPB1 [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 852
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 301/856 (35%), Positives = 474/856 (55%), Gaps = 70/856 (8%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K+ FL + +LDLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKTKVLLDLCAAPGSWCQVAAETMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
+GSL++G+DL PI PI ++ + DIT +CRA +K+ ++ V D VLHDG+PNVG
Sbjct: 68 MGSLIIGVDLSPIKPIPRVITFQSDITTEKCRATIKQHLKGWKV---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q++ +Q L + S+KLAT+FL GTFVTKVFRS+DY+S+L+ QLF KVE KP
Sbjct: 125 AWVQDSFNQAELTLQSMKLATEFLVEGGTFVTKVFRSKDYNSLLWIFNQLFTKVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ +KAP +IDP+ LD + +F+ P V + +KR R GY
Sbjct: 185 SSRNVSAEIFVVCRGFKAPKRIDPKFLDPRAVFEELADPTPNNEAKVYKPEVKKRKRGGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
EDGD T K A+ FI + +P+EILG ++F GD A +A+ TT E++
Sbjct: 245 EDGDYTQFKEISASQFIQTTDPIEILGQYNRLSFVQPPNGDVALAALDKLPETTGEIRIC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFS--------SAEKATVPASASAPTEGENEEDADN 350
C+DL+VLG+++FK LLKWR+ +++ F A A+A+ D +
Sbjct: 305 CEDLKVLGRKEFKMLLKWRLAVREIFGFPTKKSAKKEAAAATAAAAAEEVAEVESMDEEM 364
Query: 351 RVLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGM--QIDVMQDD---YTDHELFS 405
++ +++ LK + +KKRE++ +++ K+ R M +D+ D + +F+
Sbjct: 365 KIQEDLQALKDKVASKKKRERRRDNERKQKEIVRMQMHMVAPMDIGLDQAGPAGEDAMFA 424
Query: 406 LSSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEV 465
L +++ K + A + +E E P +D + S ++D+E +++LE
Sbjct: 425 LKAVE-KGEGAMRRLTKGKMVVVSE----EEPKKDRDSGIGSSGETDDESDDAEDRLETE 479
Query: 466 LDQAYENYVAKRGGSTMQRKRAKKAY---------AQEDQLSEGDEDEDTMHTSYDSDKD 516
LD Y+ + ++ S + RAKKA D EG+ D+ SD
Sbjct: 480 LDGLYDEFKERKAASDA-KYRAKKARQGHGDDEWEGVSDNGKEGEISSDSELEEESSDDS 538
Query: 517 QGDLDAN---PLMVPLDDGIRPTQ--EEITNKWFSQEIFAEAVQNGDLGKLGSEDETQVD 571
+ +A+ L+ LD T + +F+Q+IF + G L + +E + D
Sbjct: 539 DDEGEASGKKSLLTDLDTAPSDTSGLSKRARAFFNQDIFKDL--EGVLDE-PTEADADDD 595
Query: 572 KQAEKHSIPEK--AKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESED 629
E P K KQ A A + V VE D + G + D+ ED
Sbjct: 596 SDVEMEEAPSKPQVKQAPAKKTAEKPTKSKAVQAVESDSDDSDDDGFEVVKSGFEDDWED 655
Query: 630 EEVDTK----------AEILACAKKMLR-KKQREQILDDAYNRYMFDD-DGLPDWFLEEE 677
E+ T+ AE + A ++ +K ++DD +NR+ F D DGLPDWFL++E
Sbjct: 656 EDKRTRDGRLDIDIITAEAMTLAHQLATGEKTSYDVIDDGFNRHAFKDRDGLPDWFLDDE 715
Query: 678 RRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISD 737
+H +A +P+TK AA+K + + +ARP KKV EAK RKK A ++LEK++KK++++ +
Sbjct: 716 GQHDRAHKPITKAAAAAIKEKTRAFNARPIKKVREAKGRKKMKAAQRLEKLKKKSDLLVN 775
Query: 738 QADISDRSKRKQIEQLYKSAVPKRPKK--EYVVAK---KGVQVRAG--KGKV-LVDPRMK 789
+ ++++ K + I +L + A K+PK+ + VVAK +G++ R KG+ +VDPRMK
Sbjct: 776 EEGMTEKEKAESIAKLLRKATKKKPKQSVKVVVAKGANRGIKGRPSGVKGRYKIVDPRMK 835
Query: 790 KDSRT--HGSGKARKG 803
K+ R + KA+KG
Sbjct: 836 KEMRALKRKAQKAKKG 851
>gi|322706026|gb|EFY97608.1| AdoMet-dependent rRNA methyltransferase spb1 [Metarhizium
anisopliae ARSEF 23]
Length = 840
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 303/849 (35%), Positives = 464/849 (54%), Gaps = 84/849 (9%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K+ FL S +LDLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAEVMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
+ SL++G+DL PI PI ++ + DIT CRA +++ ++ D VLHDG+PNVG
Sbjct: 68 MNSLIVGVDLAPIKPIPRVITFQSDITTENCRATIRQHLKTWKA---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AWAQ++ +Q L + S+KLAT+FL GTFVTKVFRS+DY+ +L+ L QLF KVE KP
Sbjct: 125 AWAQDSFNQAELALQSMKLATEFLVEGGTFVTKVFRSKDYNPLLWVLNQLFTKVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ +KAP +IDPR LD +Y+F P V +KR R+GY
Sbjct: 185 SSRNVSAEIFVVCRGFKAPKRIDPRFLDPRYVFAELTGATPNNEAKVYNPEVKKRKREGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
++GD L K A++FI + +P+ ILGS +TF GD A +A+ TTEE++
Sbjct: 245 DEGDYILYKEVPASEFIQTTDPIAILGSCNKLTFSQPRGGDIALAALDKLPETTEEIRQC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKK--AFSSAEKATVPASASAPTEGENEEDADNRVLNEM 356
C DL+VLG++DFK LLKWR++ + FS+ EK A+ D + R+ E+
Sbjct: 305 CQDLKVLGRKDFKLLLKWRLKARGIFGFSTKEKDQEEAAIGEEVVEVESMDEELRLQEEL 364
Query: 357 EELKYAMDQRKKREKKLLAKKRAKDKARKATGM--QIDVMQDD---YTDHELFSLSSI-- 409
+ +K + +KKRE++ +K+ ++ R M +D+ ++ + +FSL S
Sbjct: 365 QSMKDKENSKKKRERRKENEKKQREIVRMQLNMVAPMDIGMEESGPIGEGAMFSLKSADK 424
Query: 410 --------KGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQ 461
+GK + + N A E E N D ++
Sbjct: 425 SGALRRLNRGKMVVVPGQTPVAAQNVAEESDGGENENDDEEDF----------------- 467
Query: 462 LEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQ--EDQLSEGDEDEDT--------MHTSY 511
LE LD YENY +R + RAKKA + +D+ DED
Sbjct: 468 LERELDSMYENY-RERKAEADAKYRAKKAREERPDDEWEGLSADEDAEKSDSSELEEEED 526
Query: 512 DSDKDQGDLDANPLMVPLDDGIRPTQEEITNK---WFSQEIF---------AEAVQNGDL 559
DS D+ D A L+ LDD P+ + ++ + +FSQ+IF + + N
Sbjct: 527 DSSDDEEDEPARSLLTDLDDSA-PSSDGLSKRAAAFFSQDIFKDFTTSEKDVDIIGNNFA 585
Query: 560 GKLGSEDETQVDKQAE-KHSIPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGAD- 617
KL ++ +KQ H+ +KA Q HN + + DFE+V + AD
Sbjct: 586 EKLAVNGQSSKNKQLNGAHASSKKAVQSQTQTNQTHSQEHN--DDEDNDFEVVKSNNADD 643
Query: 618 -SSDDSSSDESEDEEVDTKAEILACAKKMLR-KKQREQILDDAYNRYMF-DDDGLPDWFL 674
D D D ++ T AE + A ++ +K +DD +N++ F D +GLP+WF+
Sbjct: 644 WEEDKRLPDGKLDIDIIT-AEAMTLAHQLASGQKTSHDAIDDGFNKHAFRDREGLPEWFI 702
Query: 675 EEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANV 734
++E +H + +P+TK A+K + + +ARP KKV EAKARKK A +KLEK++KK+++
Sbjct: 703 DDEGKHDKPHKPITKAAANAIKEKLRAFNARPIKKVREAKARKKLKAAQKLEKLKKKSDM 762
Query: 735 ISDQADISDRSKRKQIEQLYKSAVPKRPKK--EYVVAK---KGVQVR--AGKGKV-LVDP 786
+++ ++++ K + I +L A K+P + + VVA+ +GVQ R +G+ +VDP
Sbjct: 763 LANDEGMTEKEKAESIAKLLSKAARKKPTQPAKLVVARGLNRGVQGRPKGVRGRYRMVDP 822
Query: 787 RMKKDSRTH 795
RMKK+ R
Sbjct: 823 RMKKELRAQ 831
>gi|322699763|gb|EFY91522.1| AdoMet-dependent rRNA methyltransferase spb1 [Metarhizium acridum
CQMa 102]
Length = 840
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 295/840 (35%), Positives = 467/840 (55%), Gaps = 66/840 (7%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K+ FL S +LDLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAEVMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V SL++G+DL PI PI ++ + DIT CRA +++ ++ D VLHDG+PNVG
Sbjct: 68 VNSLIIGVDLAPIKPIPKVITFQSDITTENCRATIRQHLKTWKA---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AWAQ++ +Q L + S+KLAT+FL GTFVTKVFRS+DY+ +L+ L QLF KVE KP
Sbjct: 125 AWAQDSFNQAELALQSMKLATEFLVEGGTFVTKVFRSKDYNPLLWVLNQLFTKVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ +KAP +IDPR LD +Y+F P V +KR R+GY
Sbjct: 185 SSRNVSAEIFVVCRGFKAPKRIDPRFLDPRYVFAELTGATPNNEAKVYNPEVKKRKREGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
++GD L K A++FI + +P+ ILGS +TF GD A +A+ TTEE++
Sbjct: 245 DEGDYILYKEVPASEFIQTTDPIAILGSCNKLTFSQPHGGDIALAALDKLPETTEEIRQC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADN--RVLNEM 356
C DL+VLG++DFK LLKWR++ + F + K A+ E E D R+ E+
Sbjct: 305 CQDLKVLGRKDFKLLLKWRLKARGIFGFSTKERDQEEAAIAEEVVEVESMDEELRLQEEL 364
Query: 357 EELKYAMDQRKKREKKLLAKKRAKDKARKATGM--QIDVMQDDYTDHELFSLSSIKGKKD 414
+ +K + +KKRE++ +K+ ++ R M +D+ ++ ++ S+K
Sbjct: 365 QSMKDKENSKKKRERRKENEKKQREIVRMQLNMVAPMDIGMEESGPIGEGAMFSLKSADR 424
Query: 415 LAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENYV 474
A+ + D +E + +SD+E ++ LE LD YENY
Sbjct: 425 SGALRRLNRGKMVVVRDQAPMTAQNVAEESDGGENESDDE----EDLLERELDSMYENY- 479
Query: 475 AKRGGSTMQRKRAKKAYAQ--EDQLSEGDEDEDTMHTSYDSDKDQGDLD--------ANP 524
+R + RAKKA + +D+ DED + +++ D A
Sbjct: 480 RERKAEADAKYRAKKAREERGDDEWEGLSADEDAEKSDSSELEEEEDDSSDEEEDQPARS 539
Query: 525 LMVPLDDGIRPTQEEITNK---WFSQEIFAEAV---QNGDLGKLGSEDETQVDKQAEKHS 578
L+ LDD P+ + ++ + +FSQ+IF + ++ D+ + V+ Q+ K+
Sbjct: 540 LLTDLDDSA-PSSDGLSQRAAAFFSQDIFKDFTTSEKDVDIIDNNFAERLAVNSQSSKYG 598
Query: 579 IPEKAKQKMANDAAGPKSTHNQV----SEVEGD-------FEIVPAPGAD--SSDDSSSD 625
Q +A+ K+ +Q + ++GD FE+V + AD D D
Sbjct: 599 ------QLNGANASSKKAVQSQTRTNQTHLQGDDDDEDNGFEVVKSNNADDWEEDKRLPD 652
Query: 626 ESEDEEVDTKAEILACAKKMLR-KKQREQILDDAYNRYMF-DDDGLPDWFLEEERRHRQA 683
D ++ T AE + A ++ +K +DD +N++ F D +GLP+WF+++E +H +
Sbjct: 653 GKLDIDIIT-AEAMTLAHQLATGQKTSHDAIDDGFNKHAFRDKEGLPEWFIDDEGKHDKP 711
Query: 684 IRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISD 743
+P+TK A+K + + +ARP KKV EAKARKK A +KLEK++KK++++++ +++
Sbjct: 712 HKPITKAAANAIKEKLRAFNARPIKKVREAKARKKLKAAQKLEKLKKKSDMLANDEGMTE 771
Query: 744 RSKRKQIEQLYKSAVPKRPKK--EYVVAK---KGVQVR--AGKGKV-LVDPRMKKDSRTH 795
+ K + I +L A K+P + + VVA+ +GVQ R +G+ +VDPRMKK+ R
Sbjct: 772 KEKAESIAKLLSKAARKKPTQPAKLVVARGLNRGVQGRPKGVRGRYRMVDPRMKKELRAQ 831
>gi|427788789|gb|JAA59846.1| Putative sam-dependent rrna methyltransferase spb1 [Rhipicephalus
pulchellus]
Length = 800
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 299/813 (36%), Positives = 451/813 (55%), Gaps = 55/813 (6%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R DK+Y LAKE G+RSRA++KL+QL+ KF FL+ S ++DLCAAPGGW+QVA + +P
Sbjct: 8 GKQRKDKFYHLAKETGFRSRAAFKLIQLNRKFEFLQRSRVLIDLCAAPGGWLQVAQKYMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V S+++G+DLVPI PI ++++ DIT CR ++KK ++ D+VL+DG+PNVG
Sbjct: 68 VSSVIIGVDLVPIRPIPNVIAIQDDITTGSCRTKLKKELKTWKA---DIVLNDGAPNVGK 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
+W +A QN L + +VKLAT+FL G F+TKVFRS+DY ++++ LK+LF+K+ KP
Sbjct: 125 SWVHDAYGQNVLTLHAVKLATEFLNKGGWFITKVFRSKDYQALMWVLKKLFKKISATKPQ 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKV--VDVLRGTKQKRHRDGY 243
ASR SAEI+++ Y AP KIDPR LD +LF V+ +V ++ KQK +GY
Sbjct: 185 ASRHESAEIFVVCQSYIAPDKIDPRFLDPAHLF-SDVDTGEVAKLNPAHPEKQKPKAEGY 243
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLR 303
+ D TL DF+ N LE+LG + + D A H LTT+E+ C D++
Sbjct: 244 PENDYTLYHRVPVMDFLKCENHLEVLGQCSEVVIDDEEVLA---HPLTTQEIIECCKDIK 300
Query: 304 VLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADN-RVLNEMEELKYA 362
VLG+ D K+LL WR ++K +K E E E D + ++L EE+
Sbjct: 301 VLGRGDIKNLLTWRKKLKAWLEEKDKKEEETKEEGVEEVEEETDDEELQLLKHAEEV--T 358
Query: 363 MDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYT----DHELFSLSSIKGKKDLAAV 418
+Q ++ +KK + + K R +Q+ V+++D D +LF L +IK +K L+ V
Sbjct: 359 AEQARELKKKKKKVLKQRKKLRDRMNLQM-VLKNDQAIVEEDLDLFKLKAIKNEKQLSNV 417
Query: 419 EYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENYVAKRG 478
D+ DV D + + DI+ + R+K + L+ E++ A+ G
Sbjct: 418 --DEVDVGTL-----------DPAQPLEDDIEDLDHRKKRVSYKKNALN---EDWYAEEG 461
Query: 479 GSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDANPLMVPLDDG-IRPTQ 537
+ + + +E + E++ + + Q D NPL+V + G ++ +
Sbjct: 462 DANDEDDDSDDDEHEELEFESDAEEDTKDDEDEEDNVPQED--ENPLLVDVAYGSLKNKR 519
Query: 538 EEITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKMA-NDAAGPKS 596
+E+ WF +E FA+ +L +L E + +K K S + KQK + + K
Sbjct: 520 KEMGKLWFEKEAFADMDDEEELLELEMMSEGK-EKSTGKPSKSSEGKQKASESKKEQKKV 578
Query: 597 THNQVSEVEGDFEIVPAPGADSSDDSSSDESEDE-------EVDTKAEILACAKKMLR-K 648
T +V+ + A S S+ ++ E V E LA M++ +
Sbjct: 579 TFADAVQVDATDKSTAASTGGSQKTKSTTKTSGEPPKKKQKRVKLDPEGLAIGTMMIKSR 638
Query: 649 KQREQILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAK 708
K + I+D +NRY F+DD LP WF+EEE++H + + P T E +A KAQ K ++ARP K
Sbjct: 639 KAKRDIIDAGFNRYTFNDDNLPKWFVEEEKKHSKKMMPETAEMVAEYKAQLKAVNARPIK 698
Query: 709 KVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKK-EYV 767
KVAEAKARKK A RKLEK RK+A I+++ D++D K +QI +YK + K+ K Y+
Sbjct: 699 KVAEAKARKKLRAARKLEKARKRAETITEKLDMTDAEKAQQIRAIYKKVLRKKDDKVTYL 758
Query: 768 VAKK--GVQVR-----AGKGKVLVDPRMKKDSR 793
VAKK G +VR GK KV VDPRMKKD R
Sbjct: 759 VAKKATGRKVRRPPGVKGKFKV-VDPRMKKDLR 790
>gi|346322955|gb|EGX92553.1| AdoMet-dependent rRNA methyltransferase spb1 [Cordyceps militaris
CM01]
Length = 827
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 296/829 (35%), Positives = 461/829 (55%), Gaps = 56/829 (6%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RAS+KLVQL+ K+ FL S +LDLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARASFKLVQLNKKYGFLEKSKVLLDLCAAPGSWCQVASEVMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V SL++G+DL PI PI ++ + DIT +CRA +++ ++ D VLHDG+PNVG
Sbjct: 68 VNSLIVGVDLSPIKPIPRVITFQSDITTEKCRATIRQHLKTWKA---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q++ +Q L + ++KLAT+FL GTFVTKVFRS+DY+ +L+ L QLF VE KP
Sbjct: 125 AWVQDSFNQAELALQAMKLATEFLVEGGTFVTKVFRSKDYNPLLWVLNQLFTYVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ YKAP +IDPRLLD + +F P V +KR RDGY
Sbjct: 185 SSRNVSAEIFVVCRGYKAPKRIDPRLLDPRSVFAELAGATPNNEAKVYNPEVKKRKRDGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
++GD TL K A++FI + +P+ ILGS +TF GD A +A+ TT E++
Sbjct: 245 DEGDYTLYKQVPASEFIQTMDPIAILGSSNKLTFQQPPNGDVALAALDKLPETTPEIRTC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEE 358
C DL++LG++DFK LLKWR+++++ F A K A+AS E D + ++ E++
Sbjct: 305 CSDLKILGRRDFKLLLKWRLRVREIFGLATKEKAVAAASEEVAEVEEMDEELKIEEELQA 364
Query: 359 LKYAMDQRKKREKKLLAKKRAKDKARKATGM--QIDVMQDD---YTDHELFSLSSIKGKK 413
++ +KKREK+ +K+ K+ R M +D+ ++ + +F+L S +
Sbjct: 365 MRDRDGSKKKREKRRENEKKQKEIVRMQMNMISPMDIGMEEAGPVGEGSMFTLKSADKTE 424
Query: 414 DLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENY 473
+ + + A+ ++ P+ S+D +SD E +++LE LD YEN+
Sbjct: 425 AMRRLNRGKMATISDAKPVLEQGPD-------SNDDESDLE----EDRLERDLDSMYENF 473
Query: 474 VAKRGGSTMQRKRAKKAYAQE-----DQLS--EGDEDEDTMHTSYD--SDKDQGDLDANP 524
+R + RAKKA Q + LS EG+E + + D S D+ D A
Sbjct: 474 -KERKAEYDAKYRAKKAREQRGDEEWEGLSAGEGEESDSSALEEEDEYSSSDEDDGPAEG 532
Query: 525 LMVPLDDGIRPTQ--EEITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEK 582
L+ ++ R +F+Q+IF + L G E VD+ E ++
Sbjct: 533 LLKRFEEDQRNANGLSSRAAAFFNQDIFKGITEA--LPTAGKPGEQIVDEDEEIRNLKRT 590
Query: 583 AKQ-KMANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILAC 641
+ + +S +++ E +I PGAD DD E+ + + +I+
Sbjct: 591 TRTLEEGQSTLTKRSGFTRLTAKENVDKIEVVPGADEEDDWERKETRRPDGNLDIDIITA 650
Query: 642 AKKMLR------KKQREQILDDAYNRYMF-DDDGLPDWFLEEERRHRQAIRPVTKEEIAA 694
L KK + ++DD +N++ F D DGLP+WF+E+E RH + +P++K A
Sbjct: 651 EAMTLAHLLASGKKTSQDVIDDGFNKHAFRDRDGLPEWFIEDESRHDKPHKPISKAAAQA 710
Query: 695 MKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLY 754
+K + + +ARP KKV EAKARKK A +KLE++RKK+++++ ++++ K I ++
Sbjct: 711 IKEKLRAFNARPIKKVREAKARKKIKAAQKLERLRKKSDMLAADEGMTEKEKADSITKML 770
Query: 755 KSAVPKRPKK--EYVVAK---KGVQVRAG--KGKV-LVDPRMKKDSRTH 795
A K+P + VVA+ KG++ R KG+ +VD RMKK+ R
Sbjct: 771 SRAARKKPSQPARLVVARGANKGIKGRPNGVKGRYRIVDARMKKELRAQ 819
>gi|46126149|ref|XP_387628.1| hypothetical protein FG07452.1 [Gibberella zeae PH-1]
Length = 839
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 299/840 (35%), Positives = 473/840 (56%), Gaps = 60/840 (7%)
Query: 3 KVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQ 62
K K K RLDK+YRLAKE GYR+RA++KL+QL+ K+ FL S ++DLCAAPG W+QVA +
Sbjct: 5 KEKAKGRLDKWYRLAKEKGYRARAAFKLIQLNKKYGFLEKSRVLIDLCAAPGSWLQVAAE 64
Query: 63 RVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPN 122
+P GSL++G DL PI PI S + DIT +CRA +K+++ H V+HDG+PN
Sbjct: 65 VMPQGSLIVGCDLSPIKPIPRVTSFQSDITSEDCRATLKRLLLSHKACT---VIHDGAPN 121
Query: 123 VGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVD 182
VG AW Q+A QNALV+ S+KLAT+F+ P GTFVTKVFRS+DY+S+L+ KQLF KVE
Sbjct: 122 VGTAWTQDAFDQNALVLQSLKLATEFMKPDGTFVTKVFRSKDYNSLLWVFKQLFNKVEAT 181
Query: 183 KPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHR 240
KP++SR+ S+EI+++ YKAP K+DPR LD Y+F P V +KR R
Sbjct: 182 KPSSSRNVSSEIFVVCRGYKAPKKMDPRFLDPTYVFAELAGPTPNNEAKVYNPEVKKRKR 241
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEV 295
DGY++ + K A++FI + +P+ +LGS ++F GD A +A+ TTEE+
Sbjct: 242 DGYDEENFLQFKEMPASEFIQTTDPIAVLGSYNKLSFQQPRNGDVALAALDKLPETTEEI 301
Query: 296 KALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNE 355
+ C DLRVLG++DFK LLKWR+++++ F K + + + D + ++ E
Sbjct: 302 RNSCSDLRVLGRKDFKLLLKWRLKVREIFGFETKKALNTAETEEVAEVESMDEELKIQQE 361
Query: 356 MEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQ--IDVMQDD---YTDHELFSLSSIK 410
+E++K + +++REK+ +++ ++ R M +D+ ++ + +FSL +
Sbjct: 362 LEDMKDKENSKRRREKRRENERKQREIVRMQLNMTAPMDIGMEEAGPIGEGAMFSLKKVD 421
Query: 411 GKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAY 470
+ + V + A P + + S ++D+E +++LE LD Y
Sbjct: 422 KTDAMRRLNRGKMIVPSQA-------PQKQLDSGLGSSGETDDESDPEEDRLERELDSMY 474
Query: 471 ENYVAKRGGSTMQRKRAKKAYAQE-----DQLS--EGDEDEDTMHTSYDSDKDQGDLDAN 523
++Y +R + RAKKA + + LS E DE D+ D D D DA
Sbjct: 475 DHY-KERKSEIDAKYRAKKARKEHGDDEWEGLSGEEADEKNDSSDLEEDDSSDDDDEDAA 533
Query: 524 P---LMVPLDD--GIRPTQEEITNKWFSQEIF---AEAVQNGDLGKLGSEDETQVDKQAE 575
P L+ LD G + TN +F+Q++F V + + ++++ A
Sbjct: 534 PSQGLIRDLDSSKGANGLSKRATN-FFNQDVFQGITGIVPEEEEESAEDSADEEINRDAA 592
Query: 576 KHSIPEKAKQKMANDAAGP----KSTHNQVSEVEGD---FEIVPAPGAD--SSDDSSSDE 626
+ +K+ AA P +T + S++EG+ FE+V D D +D
Sbjct: 593 AVVAQQSKARKVETPAAKPVEINDTTVDSDSDMEGNENGFEVVKRTEEDDWDKDQRRADG 652
Query: 627 SEDEEVDTKAEILACAKKMLR-KKQREQILDDAYNRYMF-DDDGLPDWFLEEERRHRQAI 684
D ++ T AE + A ++ +K +DD +N+Y F D DGLPDWF+E+E +H +
Sbjct: 653 RLDIDIIT-AEAMTLAHQLATGQKTTHDAIDDGFNKYAFRDRDGLPDWFVEDETKHDRLQ 711
Query: 685 RPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDR 744
+P+TK A+K + + +ARP KKV EAKARKK A ++LEK++KK++++++ +++++
Sbjct: 712 KPITKAAAQAIKEKMRAFNARPIKKVREAKARKKFKAAQQLEKLKKKSDMLNNDENMTEK 771
Query: 745 SKRKQIEQLYKSAVPKRPKKE---YVVAK---KGVQVR--AGKGKV-LVDPRMKKDSRTH 795
K + I +L A K+P K+ VVA+ +G++ R KG+ +VDPRMKK+ R
Sbjct: 772 EKAESIGRLMARAQKKKPVKQAAKLVVARGLNRGIKGRPKGVKGRYRIVDPRMKKELRAQ 831
>gi|408391037|gb|EKJ70421.1| hypothetical protein FPSE_09415 [Fusarium pseudograminearum CS3096]
Length = 840
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 307/846 (36%), Positives = 477/846 (56%), Gaps = 71/846 (8%)
Query: 3 KVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQ 62
K K K RLDK+YRLAKE GYR+RA++KL+QL+ K+ FL S +LDLCAAPG W+QVA +
Sbjct: 5 KEKAKGRLDKWYRLAKEKGYRARAAFKLIQLNKKYGFLEKSRVLLDLCAAPGSWLQVAAE 64
Query: 63 RVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPN 122
+P GSL++G DL PI PI S + DIT +CRA +K++++ H + D V HDG+PN
Sbjct: 65 VMPQGSLIVGCDLSPIKPIPRVTSFQSDITSEDCRATLKRLLK-HAL--CDTVCHDGAPN 121
Query: 123 VGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVD 182
VG AW Q+A QNALV+ S+KLAT+FL P GTFVTKVFRS+DY+S+L+ KQLF KVE
Sbjct: 122 VGTAWTQDAFDQNALVLQSLKLATEFLRPDGTFVTKVFRSKDYNSLLWVFKQLFNKVEAT 181
Query: 183 KPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHR 240
KP++SR+ S+EI+++ YKAP K+DPR LD Y+F P V +KR R
Sbjct: 182 KPSSSRNVSSEIFVVCRGYKAPKKMDPRFLDPTYVFAELAGPTPNNEAKVYNPEVKKRKR 241
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEV 295
DGY++ + K A++FI + +P+ +LGS ++F GD A +A+ TTEE+
Sbjct: 242 DGYDEENFLQFKEMPASEFIQTTDPIAVLGSYNKLSFQQPRNGDVALAALDKLPETTEEI 301
Query: 296 KALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNE 355
+ C DLRVLG++DFK LLKWR+++++ F K + + + D + ++ E
Sbjct: 302 RNSCSDLRVLGRKDFKLLLKWRLKVREIFGFETKKALNTAETEEVAEVESMDEELKIQQE 361
Query: 356 MEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQ--IDVMQDD---YTDHELFSLSSIK 410
+E++K + +++REK+ +++ ++ R M +D+ ++ + +FSL +
Sbjct: 362 LEDMKDKENSKRRREKRRENERKQREIVRMQLNMTAPMDIGMEEAGPIGEGAIFSLKKVD 421
Query: 411 GKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAY 470
+ + V + A P + + S ++D+E +++LE LD Y
Sbjct: 422 KTDAMRRLNRGKMIVPSQA-------PQKQFDSGLGSSGETDDESDPEEDRLERELDSMY 474
Query: 471 ENYVAKRGGSTMQRKRAKKAYAQE-----DQLS--EGDEDEDTMHTSYDSDKDQGDLDAN 523
++Y +R + RAKKA + + LS E DE D+ D D D DA
Sbjct: 475 DHY-KERKSEIDAKYRAKKARKEHGDDEWEGLSGEEADEKNDSSDFEEDDSSDDDDEDAA 533
Query: 524 P---LMVPLDD--GIRPTQEEITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHS 578
P L+ LD G + TN +F+Q++F G G + E+E + + +
Sbjct: 534 PTQGLIRDLDSSKGANGLSKRATN-FFNQDVF-----QGITGIVPEEEEEESAEDSADEE 587
Query: 579 IPEKAKQKMAND---------AAGP----KSTHNQVSEVEGD---FEIVPAPGAD--SSD 620
I A +A AA P ++T + S++EG+ FE+V D D
Sbjct: 588 INRDAAAVVAQQSKARTVEKPAAKPAEINETTVDSDSDMEGNENGFEVVKRTEEDDWDKD 647
Query: 621 DSSSDESEDEEVDTKAEILACAKKMLR-KKQREQILDDAYNRYMF-DDDGLPDWFLEEER 678
+D D ++ T AE + A ++ +K +DD +N+Y F D DGLPDWF+E+E
Sbjct: 648 QRRADGRLDIDIIT-AEAMTLAHQLATGQKTTHDAIDDGFNKYAFRDRDGLPDWFVEDET 706
Query: 679 RHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQ 738
RH + +P+TK A+K + + +ARP KKV EAKARKK A ++LEK++KK++++++
Sbjct: 707 RHDRLQKPITKAAAQAIKEKMRAFNARPIKKVREAKARKKFKAAQQLEKLKKKSDMLNND 766
Query: 739 ADISDRSKRKQIEQLYKSAVPKRPKKE---YVVAK---KGVQVR--AGKGKV-LVDPRMK 789
+++++ K + I +L A K+P K+ VVA+ +G++ R KG+ +VDPRMK
Sbjct: 767 ENMTEKEKAESIGRLMARAQKKKPVKQAAKLVVARGLNRGIKGRPKGVKGRYRIVDPRMK 826
Query: 790 KDSRTH 795
K+ R
Sbjct: 827 KELRAQ 832
>gi|225684454|gb|EEH22738.1| AdoMet-dependent rRNA methyltransferase spb1 [Paracoccidioides
brasiliensis Pb03]
Length = 826
Score = 414 bits (1064), Expect = e-112, Method: Compositional matrix adjust.
Identities = 299/849 (35%), Positives = 467/849 (55%), Gaps = 104/849 (12%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K+ FL S +LDLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
SL++G+DL PI PI ++ + DIT +CRA +++ + D VLHDG+PNVG
Sbjct: 68 SQSLIVGVDLAPIKPIPKVITFQSDITTDKCRATIRQHFKSWKA---DTVLHDGAPNVGV 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A SQ LV+ S+KLAT+FLAP GTFVTKVFRS+DY+ +L+ KQLF V+ KP
Sbjct: 125 AWVQDAFSQAELVLQSLKLATEFLAPGGTFVTKVFRSKDYNPLLWVFKQLFTSVKATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVD--VLRGTKQKRHRDGY 243
+SR+ SAEI+++ + +KAP IDPR LD K++F +P + V K+KR RDGY
Sbjct: 185 SSRNVSAEIFVVCLGFKAPKHIDPRFLDAKHVFAELQDPTPNYEAKVFNPEKKKRKRDGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+G+ K ++FI + +P+ ILG ++F D A + +K TT+E++
Sbjct: 245 EEGNYIQFKEIPVSEFINTTDPISILGEYNKLSFEQSTGADLALTTLKRLPETTKEIQLC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAF-------SSAEKATVPASASAPTEGENEEDADNR 351
C+DL+VLGK++F++LL+WR+++++ F SS + + P + E D R
Sbjct: 305 CEDLKVLGKKEFRNLLRWRIKVREKFGLAVKKGSSKAVESEEVAEVEPMDEELALQEDLR 364
Query: 352 VLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDD-YTDHELFSLSSIK 410
L+E E + ++RK+ E+K K+ + + T M I Q + + ++FSL I
Sbjct: 365 HLHEKETSRKKRERRKENERK--QKEIVRMQMHMTTPMDIGTEQSGPFGEGQMFSLKPIN 422
Query: 411 GKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAY 470
+A + VN +ED E+ S+ ID + + + + E Y
Sbjct: 423 RTGAVANIT-SGKMVNVESEDEEE-----------SATIDEESDEEEDRLERELD--AMY 468
Query: 471 ENYVAKRG--GSTMQRKRAKKAYAQE------DQLSEGDEDEDTMHTSYDSDKDQGDLDA 522
E Y A R + ++ K+A+K + E D EGDE+ D DA
Sbjct: 469 ERYQANREERDAKLRAKKARKDFEAEEWEGISDFEKEGDEETDN--------------DA 514
Query: 523 NPLMVPLDDGIRPT--QEEITNK---WFSQEIF---------------AEAVQNGDLGKL 562
P +VP RP+ + ++NK +F Q+IF E Q+GD
Sbjct: 515 -PRLVP-----RPSVGSKGLSNKAAMFFDQDIFQGLGDLGEEDDEQDDGEGHQDGDDIAA 568
Query: 563 GSEDETQVDK----QAEKHS--IPEKAKQKMANDAAGPK--STHNQVSEVEGDFEIVPAP 614
+D + D+ A + S IP ++ N+ K S H + ++ D I P
Sbjct: 569 PEQDNIESDEGDYSDASESSDDIPTSQEKPKLNNKQTEKRGSKHEKATK---DNNISPDF 625
Query: 615 GADSSDDSSSDESEDEEVDTKAEILACAKKMLR-KKQREQILDDAYNRYMFDDD-GLPDW 672
+ D + D ++ T AE + A++++ +K ++DD +N++ F D GLP+W
Sbjct: 626 EGEKQDPRKKNGQLDIDIIT-AEAMTLAQQIVTGEKTSHDVVDDGFNKFTFRDTYGLPEW 684
Query: 673 FLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKA 732
FL++E +H + +P+T AA++ + + I+ARP KKV EAK RKK A ++LEK+RKK+
Sbjct: 685 FLDDESKHSKPQQPITAAAAAAIREKLRAINARPIKKVQEAKGRKKFKAAKRLEKLRKKS 744
Query: 733 NVISDQADISDRSKRKQIEQLYKSAVPKRPKK--EYVVAK---KGVQVR--AGKGKV-LV 784
++++ +S++ K + I ++ A+ K+PK+ + VVAK KG+ R KG+ +V
Sbjct: 745 ALLAEDEAMSEKDKAQTIARMMSRAMKKKPKQSVKLVVAKGSNKGIAGRPKGVKGRYKIV 804
Query: 785 DPRMKKDSR 793
D RMKKD R
Sbjct: 805 DARMKKDVR 813
>gi|378726806|gb|EHY53265.1| hypothetical protein HMPREF1120_01459 [Exophiala dermatitidis
NIH/UT8656]
Length = 835
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 305/847 (36%), Positives = 466/847 (55%), Gaps = 89/847 (10%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+YRLAKE GYR+RA++KL+QL+ K+ FL S +LDLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYRLAKEKGYRARAAFKLIQLNKKYGFLEKSRVLLDLCAAPGSWCQVAAETMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
SL++G+DL PI PI ++ + DIT +CRA ++ + ++A D VLHDG+PNVG
Sbjct: 68 AQSLIVGVDLAPIKPIPHVITFQSDITTDKCRATIRTHFKH--LKA-DTVLHDGAPNVGV 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A SQ LV+ S+KLAT+FL GTFVTKVFRS+DY+++L+ KQLF VE KP
Sbjct: 125 AWVQDAFSQAELVLQSMKLATEFLKEGGTFVTKVFRSKDYNALLWVFKQLFTSVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVE--PRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ +KAP +IDP+ LD K++F E P V K+KR R+GY
Sbjct: 185 SSRNVSAEIFVVCRGFKAPKRIDPKFLDPKHVFAEVQEPTPNNEAKVFNPEKKKRKREGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD T K ++FI + +P+ ILG+V ++F GD A +A+ TTEE++
Sbjct: 245 EEGDWTQHKEIPVSEFIHTTDPIAILGTVNKLSFEQSPNGDLALAALDRLPETTEEIRMC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKA-----TVPASASAPTEGENEEDADNRVL 353
C DL+VLGK++F+ LL+WR++++ F + KA D + ++
Sbjct: 305 CADLKVLGKKEFRTLLRWRLKVRDKFGMSAKAKKEQEAENKEEGEEVAEVESMDEELKIQ 364
Query: 354 NEMEELKYAMDQRKKREKKLLAKKRAKDKARKAT---GMQIDVMQDDYTDHE-------L 403
E++ LK D ++KR+ A+++ ++ RK M + D + E +
Sbjct: 365 EELQRLK-EQDSKEKRK----ARRKENERKRKEIIRMQMHMTTPHDIGLEQEGPAGEGAM 419
Query: 404 FSLSSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLE 463
F+L + K +D A ++ A D D + D+Q + D+ R LE
Sbjct: 420 FTLRAAKKVQDPA-------KIDGAGMDEVDIEESEDSQAESEDEDSDDDGDR-----LE 467
Query: 464 EVLDQAYENYVAKR--GGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGD-L 520
LD YE+Y +R + ++ KRA+K ++ DED+ T+ D + D D
Sbjct: 468 RELDMLYESYQRRREEADAKLRAKRARKEKETDEWGGLSDEDKAGDATT-DGESDVDDEF 526
Query: 521 DANPLMVPLDDGIRPTQEEITNKWFSQEIFAEAV---QNGDLGKLGSEDETQVDKQAEKH 577
A PL P +G+ TQ + +F Q+IF + N + + EDE+ QA+
Sbjct: 527 PARPL--PKAEGLS-TQAAM---FFDQDIFQDLGIEDDNDNDSAIALEDESS--DQAKSQ 578
Query: 578 SIPEKA------KQKMANDAAGPKSTHNQVSE-----------VEGDFEIVPAPGADSS- 619
S P KQ +A K T + + E + E VP +S
Sbjct: 579 SPPANGAGASQDKQSKTLKSALKKPTASTAQQQRQTKVYEESDSESESETVPKSSGTASR 638
Query: 620 --DDSSSDESEDEEVDTKAEILACAKKM-LRKKQREQILDDAYNRYMFDD-DGLPDWFLE 675
D + D ++ T AE + A+ + R+ + +++DD++N++ F D DGLP+WFLE
Sbjct: 639 PEDPLLPNGQLDIDIIT-AEAMTLAQDLATRRTKPGELVDDSFNKFSFRDVDGLPEWFLE 697
Query: 676 EERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVI 735
+E +H + RP+T AA++ + + ++ARP KKV EAK RKK A +LEK+RKK+ ++
Sbjct: 698 DEAQHSKPQRPITAAAAAAIREKLRALNARPIKKVREAKGRKKMRAAARLEKLRKKSALL 757
Query: 736 SDQADISDRSKRKQIEQLYKSAVPK-RPKK--EYVVAK---KGV--QVRAGKGKV-LVDP 786
+ IS++ K I ++ A K RPK+ + VVA+ KG+ + R KGK +VD
Sbjct: 758 LEDEGISEKDKAASISRMMARAAKKGRPKEKVKLVVARGPNKGLSGRPRGVKGKYKIVDS 817
Query: 787 RMKKDSR 793
R+KKD R
Sbjct: 818 RLKKDVR 824
>gi|347837385|emb|CCD51957.1| similar to AdoMet-dependent rRNA methyltransferase spb1
[Botryotinia fuckeliana]
Length = 824
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 285/825 (34%), Positives = 458/825 (55%), Gaps = 55/825 (6%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K+ FL S +LDLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAETMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V SL++G+DL PI PI ++ + DIT +CRA ++ + D VLHDG+PNVG
Sbjct: 68 VSSLIVGVDLSPIKPIPRVITFQSDITTEKCRATIRTHFKSWKA---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q++ +Q L + S+KLAT+FLAP GTFVTKVFRS+DY+S+L+ QLF KVE KP
Sbjct: 125 AWVQDSFNQAELALQSLKLATEFLAPGGTFVTKVFRSKDYNSLLWVFNQLFTKVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ +KAP +DP+ +D +++F P V +KR RDGY
Sbjct: 185 SSRNVSAEIFVVCQGFKAPKHLDPKFVDPRHVFAELSDPTPNNEAKVFNPEIKKRKRDGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
ED + T K A++FI + +P+ ILGS+ ++F GD A +A+ TT+E++
Sbjct: 245 EDDNMTQFKEIPASEFIQTTDPIAILGSMNRLSFVQPPNGDVALAALDKLPETTDEIRND 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEE 358
C DLRVLG+++F++LLKWR+++++ F A K A + D + ++ E++
Sbjct: 305 CADLRVLGRKEFRNLLKWRLKVREKFGFATKKGAKAEPEE-VAEVEDMDEELKIQEELQA 363
Query: 359 LKYAMDQRKKREKKLLAKKRAKDKARKATGMQ--IDVMQDDYTDHELFSLSSIKGKKDLA 416
+ RKKREK+ +K+ ++ R M D+ + + S+ +K
Sbjct: 364 MSEKESSRKKREKRRENEKKQREIVRMQLHMTAPTDIGLEQAGPNGEGSMFGLKAIDKAG 423
Query: 417 AVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENYVAK 476
A A ++S+ P ++ + S D +SD+E+ + D + LD YE Y +
Sbjct: 424 AANKIAKGKMAILKESD---PRKEEGGYASEDSESDDEQDRLDRE----LDSMYEMYQEQ 476
Query: 477 RGGSTMQRKRAKKAYAQED-------QLSEGDEDEDTMHTSYDSDKDQGDLDANPLMVPL 529
+ S + RAKKA + + +E D+D + + D L+ L
Sbjct: 477 K-SSADAKFRAKKARKEHEDGDWEGFSAAEEQSDDDNLEEDSSDESDDEGPSKQSLLTDL 535
Query: 530 DDGIRPTQ--EEITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKM 587
+ + T + ++F Q+IF + G + + SE+E + + + + + E K ++
Sbjct: 536 ERNEKKTGGLSKRATQFFDQDIFKDI---GGIPEEESEEEVEEEDEEVQADLDELMKDRV 592
Query: 588 ------ANDAAGPKSTHNQVSEVEGDFEIV---PAPGADSSDDSSSDESEDEEVDTKAEI 638
P+ + + S+ E FE+V ++ D D ++ T AE
Sbjct: 593 IEEEEDEIMEEAPEESDS--SDDENGFEVVKRREGEEQWEDEEPKKDGRLDIDIIT-AEA 649
Query: 639 LACAKKMLR-KKQREQILDDAYNRYMFDD-DGLPDWFLEEERRHRQAIRPVTKEEIAAMK 696
+ A+++ +K + D+++N+Y F D DGLPDWFL++E +H + RP++ AA+K
Sbjct: 650 MTLAQQIASGQKSMYDLADESFNKYAFKDRDGLPDWFLDDEGKHDKPHRPISAAGAAAIK 709
Query: 697 AQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKS 756
+ + ++ARP KKV EAK RKK A ++LEK+RKK+ +++D+ ++++ K I +L
Sbjct: 710 EKLRALNARPIKKVREAKDRKKFKAAQRLEKLRKKSALLADEEGMTEKEKANSIGKLMSK 769
Query: 757 AVPKRPKK--EYVVAKKGVQVRAG-----KGKV-LVDPRMKKDSR 793
A K+PK+ + VVA G + AG KGK +VD R+KKD R
Sbjct: 770 AAKKKPKQNVKVVVATGGNRGIAGRPRGVKGKYKIVDARLKKDVR 814
>gi|451845533|gb|EMD58845.1| hypothetical protein COCSADRAFT_194278 [Cochliobolus sativus
ND90Pr]
Length = 839
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 296/843 (35%), Positives = 473/843 (56%), Gaps = 78/843 (9%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K++FL S ++DLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYNFLEKSKVLIDLCAAPGSWCQVASEVMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
SL++G+DL PI PI ++ + DIT +CRA +++ ++ D VLHDG+PNVG
Sbjct: 68 ANSLIVGVDLAPIKPIPRCITFQSDITTDKCRATLRQHLKHLKC---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A +Q LV+ S+KLAT+FL GTFVTKVFRS+DY+S+L+ QLF KVE KP
Sbjct: 125 AWVQDAFTQAELVLQSMKLATEFLVEGGTFVTKVFRSKDYNSLLWVFNQLFTKVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ YKAP +DP+ LD + +F P V + +KR R+GY
Sbjct: 185 SSRNVSAEIFVVCRGYKAPKHLDPKFLDARSVFAELADPTPNNEAKVFKPEVKKRKREGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD T K + +DFI + +P+ +LG + ++F GD A + I TT+E++
Sbjct: 245 EEGDWTQFKEAPVSDFIQTTDPIAMLGGLNKLSFEQKPNGDIAIATIDKLPETTKEIRDC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEE-------DADNR 351
C DL+VLG+ DFK LL+WR+++++ F A K A A E EE D + +
Sbjct: 305 CADLKVLGRADFKRLLRWRLKVREIFGFASKKDKADEAKAKEAQEGEEVAEIESMDEEMQ 364
Query: 352 VLNEMEELKYAMDQRKKREKKLLAKKRAKDKAR----KATGMQIDVMQDDYTDHE-LFSL 406
+ E+E LK + KK++++ ++R K+ R AT I + Q T + +F L
Sbjct: 365 IQEELERLKEKDTKAKKKQRRTENERRQKEITRLQMNMATPFDIGLEQVGPTGEDAMFGL 424
Query: 407 SSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVL 466
++ D A + + ++ +++ + E + ++ LE L
Sbjct: 425 KAV--------------DKAGALNKIAKGKMVQIVEKEKPEEVEEELETDEEEDYLERDL 470
Query: 467 DQAYENYVAKRGGSTMQRKRAKKAYAQE---------DQLSEGDEDEDTMH---TSYDSD 514
D Y YV +R + RAK+A Q+ D+ E +DE+ + + + SD
Sbjct: 471 DAMYGEYVEQRSARDA-KYRAKRARKQDDDGEWNGFSDEDKEQSDDEELVQDADSDWSSD 529
Query: 515 KDQGDLDANPLMVPLD-DGIRPTQEEIT---NKWFSQEIF-----AEAVQNGDLGKLGSE 565
+++G L+ LD DG ++ +T ++F Q+IF + ++ GD + E
Sbjct: 530 EEEG---PKELITDLDRDG--QSKRGLTKRAERFFDQDIFKGIDGLDDLEEGDDSGIDVE 584
Query: 566 DETQV-DKQAEKHSIPEKAKQ-KMANDAAGPKSTHNQVSEVEGDFEI--VPAPGADSSDD 621
+T++ ++ A + S EK + + AA P + S E D +I V D
Sbjct: 585 GDTEMKEESATQPSASEKTLSIRTSKKAASPAVAFDDESSDEDDDKIEEVARDETQWEQD 644
Query: 622 SSSDESEDEEVD-TKAEILACAKKMLR-KKQREQILDDAYNRYMFDD-DGLPDWFLEEER 678
S ++ ++D AE + A +M +K + +LD+++NRY D DGLPDWFL++E
Sbjct: 645 SMPMKNGKPDIDIITAEAMTLAHQMATGQKTKHDLLDESFNRYSHRDVDGLPDWFLDDEN 704
Query: 679 RHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQ 738
+H + RP + AA+K + + ++ARP KKV EA+ARKK A ++LEK++KK+ +++D+
Sbjct: 705 KHSKIQRPTSAAAAAAIKEKLRALNARPIKKVREAQARKKFKAAQRLEKLKKKSALLADE 764
Query: 739 ADISDRSKRKQIEQLYKSAVPKRPKKE--YVVAK---KGVQVR--AGKGKV-LVDPRMKK 790
++++ K + I +L A K+PK++ VVA+ KG++ R KGK +VD R+KK
Sbjct: 765 EGMTEKEKAQSIARLMSRAAKKKPKQKVSVVVARGGNKGIKNRPKGTKGKYKMVDARLKK 824
Query: 791 DSR 793
D R
Sbjct: 825 DVR 827
>gi|328772897|gb|EGF82934.1| hypothetical protein BATDEDRAFT_831, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 834
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 289/844 (34%), Positives = 463/844 (54%), Gaps = 81/844 (9%)
Query: 3 KVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQ 62
K K RLDKYY +AKE G+R+R+++KL+QL+ K+SFL + V+DLCAAPGGW+QVA +
Sbjct: 5 KKNAKGRLDKYYHMAKEQGFRARSAFKLIQLNKKYSFLEKAKVVVDLCAAPGGWLQVAQK 64
Query: 63 RVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPN 122
+P SL++GLDL PI PI G ++ +DIT +CR ++ +++ V D+ LHDG+PN
Sbjct: 65 YMPKPSLIIGLDLAPIKPISGVITHVEDITTSKCRQTIRSELKDWKV---DVFLHDGAPN 121
Query: 123 VGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVD 182
VG +W Q+A Q+ L + ++KLAT+FL P GTFVTKVFRS+DY+ +L+ +QLF KVE
Sbjct: 122 VGISWLQDAFGQSELTLSALKLATEFLMPNGTFVTKVFRSKDYNKLLWVFQQLFRKVEAT 181
Query: 183 KPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVD------------- 229
KPA+SR+ SAEI+++ +Y +P KIDPRLLD K++F+ E + V +
Sbjct: 182 KPASSRNVSAEIFVVCREYLSPKKIDPRLLDPKWVFKELDETKNVDEDDEKKIKERQGAV 241
Query: 230 ---VLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFG--DPACSA 284
+ K++R RDGY+D D TL + + FI S + L I+ +TF D +
Sbjct: 242 FNTLFNPEKRRRFRDGYDDEDYTLHTSNSVSSFIHSLDFLSIMARSHELTFDSKDEVSKS 301
Query: 285 IKDHELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGEN 344
I D LTT+ +K DL+VLGK++FK+L+KWR I+ +A++ A + +
Sbjct: 302 IFDSALTTDGIKEYLKDLKVLGKKEFKYLIKWRESIRTVLGLETRASIRAKKLEDAKEKA 361
Query: 345 EEDADNRVLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELF 404
E DA + +++ E +K A + +R KK +++AK + GM +D L
Sbjct: 362 EADAAAQKIDD-ENIKEAQRAKNRRLKKKQRERKAKLLLKLQLGMSTP------SDIGLE 414
Query: 405 SLSSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNR------DTQEHVSSDI----DSDEE 454
+ S + + ++ D+D + ++ S + P+ D+Q SDI DSD+E
Sbjct: 415 ADSGLSTRPEMDI----DEDTTSTSKKSANSSPDSASDFTDDSQGEQDSDIGSALDSDDE 470
Query: 455 RRKYDEQLEEVLDQAYENYVAK--RGGSTMQRKRAKKA--------YAQEDQLSEGDEDE 504
R + +LE +D YE Y AK T + K+ +++ Y + GD +
Sbjct: 471 RSRKVSRLEAQMDALYEEYKAKAIERNPTAKVKKLRESTKTEFEEWYGRHSSTRNGDFEN 530
Query: 505 DTMHTSYDSD------KDQGDLDANPLMVPLDD-GIRPTQEEITNKWFSQEIFA-EAVQN 556
D ++ + D K NP+ ++D +P K ++ +F E V +
Sbjct: 531 DEFNSESEEDSSVPMSKRARVFFDNPIFDMVNDKNDKPKNANAGKK--AKSMFKDEMVLS 588
Query: 557 GDLGKLGSEDETQVDKQAEKHSIPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGA 616
D + +E+ + ++ ++ K +M N A +H + + + DF +VP
Sbjct: 589 TD--EEDNENGESIQQKKANKKKKKQTKDEMLN-AFNENESHQETN--KDDFAVVPV--- 640
Query: 617 DSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQREQILDDAYNRYMFDDD-GLPDWFLE 675
D ++ +D + A+ + A++ML K + ++D+AYNRY F DD GLP WF E
Sbjct: 641 --DKDQDQEDVDDNFILDTAQKYSLAQRMLTKSGKRDLIDNAYNRYSFTDDPGLPLWFTE 698
Query: 676 EERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVI 735
EE+ H + PVTKE + +K + + +DARP +KVAEAK RK+ R++EK+ KKA +
Sbjct: 699 EEQHHNKPTMPVTKEAVDIIKQRMRALDARPIRKVAEAKFRKQMRTQRRIEKMSKKAEGL 758
Query: 736 SDQADISDRSKRKQIEQLYKSA--VPKRPKKEYVVAK---KGVQVR--AGKGKV-LVDPR 787
++ ++ ++SK + I ++ A + K + VVAK +G Q R KG+ +VD R
Sbjct: 759 NNDEEMPEKSKLEAISKMMSKAKNTKEHTKPKLVVAKGVHRGAQGRPKGVKGRYKMVDGR 818
Query: 788 MKKD 791
MKK+
Sbjct: 819 MKKE 822
>gi|389634901|ref|XP_003715103.1| AdoMet-dependent rRNA methyltransferase SPB1 [Magnaporthe oryzae
70-15]
gi|374095444|sp|Q52C47.2|SPB1_MAGO7 RecName: Full=AdoMet-dependent rRNA methyltransferase SPB1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|351647436|gb|EHA55296.1| AdoMet-dependent rRNA methyltransferase SPB1 [Magnaporthe oryzae
70-15]
Length = 865
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 300/864 (34%), Positives = 471/864 (54%), Gaps = 95/864 (10%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K+ FL S +LDLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAEVMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V SL++G+DL PI PI ++ + DIT +CRA +++ ++ D VLHDG+PNVG
Sbjct: 68 VSSLIVGVDLAPIKPIPKVITFQSDITTEKCRATIRQHLKTWKA---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q++ +Q L + ++KLAT+FL GTFVTKVFRS+DY+S+L+ QLF+KVE KP
Sbjct: 125 AWVQDSFNQAELTLQAMKLATEFLVEGGTFVTKVFRSKDYNSMLWVFNQLFKKVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ +KAP +IDP+ LD + +F P V + +KR RDGY
Sbjct: 185 SSRNVSAEIFVVCRGFKAPKRIDPKFLDPRAVFAELADPTPNNEAKVYKPEIKKRKRDGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD T K A +FI S +P+ ILGS ++ GD A + ++ TT+E++
Sbjct: 245 EEGDYTQYKELPAYEFIQSTDPIAILGSTNRLSLEQSKNGDVALAVLEKLPETTDEIRTC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEE--------DADN 350
C DL+VLG+++FK LLKWR+ +++ K +V A E D +
Sbjct: 305 CADLKVLGRKEFKLLLKWRLAVREKLGFPTKKSVKKEEEAAAAVAAAEEVAKIESMDEEM 364
Query: 351 RVLNEMEELKYAMDQRKKREKKLLAKKRAKDKAR----KATGMQIDVMQDDYTDHE-LFS 405
R+ +E+E+LK +KKRE++ +++ KD R M I V Q + +F+
Sbjct: 365 RIQHELEKLKERNSTKKKRERRKENERKQKDIVRMQMHMVAPMDIGVEQAGPEGEDAMFA 424
Query: 406 LSSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEV 465
L +++ K D+ V A+ D++ +D + S ++D+E + ++LE
Sbjct: 425 LRAVE-KGDVMRRLAKGKMVVASEADAK-----KDRDSGIGSSGETDDESDEELDRLETE 478
Query: 466 LDQAYENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDAN-- 523
LD Y+ + ++ S + RAKKA Q GD DE+ S + D+ D+
Sbjct: 479 LDDMYDQFRERKAASDA-KYRAKKAR----QARNGDGDEEWEGVSDNEKADEISDDSELE 533
Query: 524 -----------------PLMVPLDDGIRPTQEEITNK----WFSQEIFAEAVQNGDL--- 559
L+ LD P+ +K +F+Q+IF E +GD+
Sbjct: 534 EESSGDSDDEDDTAPRKSLLTDLD--TTPSDNSGLSKRARAFFNQDIFKEL--DGDMDEP 589
Query: 560 ------GKLGSED-----ETQVDKQAEKHS------IPEKAKQKMANDAAGPKSTHNQVS 602
L ED E V K K + K K A A +
Sbjct: 590 MDEELRAALAGEDEDADMEDTVSKADSKKTKEKTADKKAAKKAKKAAQKAQQVKDDDSDD 649
Query: 603 EVEGDFEIVPAPGADSSDDS---SSDESEDEEVDTKAEILACAKKMLR-KKQREQILDDA 658
E +G FE+V + D +D + D D ++ T AE + A ++ +K ++DD
Sbjct: 650 ESDGGFEVVKSGKEDDWEDEDKRTKDGRLDIDIIT-AEAMTLAHQLATGQKSSHDVIDDG 708
Query: 659 YNRYMFDD-DGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARK 717
+N++ F D +GLP+WFL++E +H + +P+TK AA+K + + +ARP KKV EAK RK
Sbjct: 709 FNKHAFKDREGLPEWFLDDETKHDKPQKPITKAAAAAIKEKMRAFNARPIKKVREAKGRK 768
Query: 718 KRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKK--EYVVAK---KG 772
K A ++LEK++KK++++ ++ ++++ K + I +L + A K+PK+ + VVAK +G
Sbjct: 769 KMKAAQRLEKLKKKSDLLVNEEGMTEKEKAESIAKLLRKATKKKPKQAVKVVVAKGANRG 828
Query: 773 VQVRAG--KGKV-LVDPRMKKDSR 793
++ R KG+ +VDPRMKK+ R
Sbjct: 829 IKGRPQGIKGRYKIVDPRMKKEMR 852
>gi|332025804|gb|EGI65961.1| Putative rRNA methyltransferase 3 [Acromyrmex echinatior]
Length = 836
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 306/875 (34%), Positives = 460/875 (52%), Gaps = 100/875 (11%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R DKYY+LAKE GYRSRA++KL+QL+ KF F + S +DLCAAPGGWMQVA Q +
Sbjct: 8 GKQRKDKYYQLAKETGYRSRAAFKLIQLNRKFEFFQKSRVCIDLCAAPGGWMQVARQNMS 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
+ S+V+G+DL PI PI G +SL +DI +CR + + ++ D+VL+DG+PNVG
Sbjct: 68 ISSIVIGVDLFPIKPIPGCLSLVEDIMTDKCRVAISRELKTWKA---DVVLNDGAPNVGK 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
+W +A Q L + ++KLATQFL G FVTKVFRS+DY+ +++ LKQLF+KV KP
Sbjct: 125 SWLHDAYQQVVLTLSALKLATQFLKAGGWFVTKVFRSKDYNPLIWVLKQLFKKVHATKPQ 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHR-DGY 243
ASR+ SAEI+++ Y AP K+DP+ D K++F + +E +++L KQK+ + +GY
Sbjct: 185 ASRNESAEIFVVCQYYIAPDKLDPKFFDPKHVFSELQIETINKLNILYPEKQKKSKAEGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLR 303
+ D TL A +FI + + L + + I D I HE TT+E++ C D++
Sbjct: 245 RENDYTLYHKISAKEFIACEDAIAALQNASEIVIDD---EIIDKHEKTTKEIRECCKDIK 301
Query: 304 VLGKQDFKHLLKWRMQIKKAFSSA---------EKATVPASASAPTEGENEEDADNRVLN 354
VLG++D K LL W +KK + E PA+ S + + E++A +
Sbjct: 302 VLGRKDLKLLLSWWKALKKTQTETNGEKNVIKDEITVTPATTSLEEQEDLEDEA---IQK 358
Query: 355 EMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDD----YTDHELFSLSSIK 410
++ +L+ A + KR++K K R K R M + + D +LF+L+ I+
Sbjct: 359 QIADLREAEARELKRKRKKANKDRQKLNERLNLKM---IHKSDEGPKLERDDLFNLNQIQ 415
Query: 411 GKKDLAAVEYDDDDVNAAAEDSEDE-RPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQA 469
+ L V D+ A+ DS++E +P E ++ +DS K ++ E D +
Sbjct: 416 TYQQLEQVTDQMPDILASDVDSDEEVKPKTIYYEKDTNHLDSKGLYYKSEDSEESDTDAS 475
Query: 470 YENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDANPLMVPL 529
+ +++ G + DE ED + D ++NPL+ L
Sbjct: 476 DDE--SEKSGLGL------------------DESEDDTTNKSQKKQQFKDPESNPLLTDL 515
Query: 530 DDGIRPTQEEITNK---WFSQEIFAEAVQNGD-----LGK------------LGSEDETQ 569
D R + + +K WF +++F + ++N D L K LG E + Q
Sbjct: 516 D--FRDKETKRAHKAALWFEKDVF-KNLENEDDADYELDKMIEQYKKKGGHVLGEEKQMQ 572
Query: 570 V---DKQAEKHSIPEKAKQKMANDAAGPKSTHNQVSEVEGD--FEIVPAPGADSSDDSSS 624
V +++ K I E D + + ++ ++ G FEIVP S
Sbjct: 573 VKVDEEKKRKRKISENDDTNSDYDVEEMMAPNKKLKKIGGKDGFEIVPQKTDKKSKTKKL 632
Query: 625 DESEDEEVDTKAEILACAKKMLR-KKQREQILDDAYNRYMFDDDGLPDWFLEEERRHRQA 683
E LA ++ KK R ++D A+NRY F+D+ LPDWF+++E +H +
Sbjct: 633 ----------TPEDLALGSLLIESKKSRRDLIDSAWNRYAFNDEKLPDWFVKDEEKHMKK 682
Query: 684 IRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISD 743
PV KE K + ++++ RP KKV EAKARKK+ A+RKLEK +KK + D DISD
Sbjct: 683 EVPVPKELADDYKKRVEDLNVRPIKKVMEAKARKKKRAIRKLEKAKKKIEALMDNVDISD 742
Query: 744 RSKRKQIEQLYKSAVPKRPKKE--YVVAKKGV-QVRA-------GKGKVLVDPRMKKDSR 793
R K +Q++ LYK A + PKKE Y+VAKK Q RA G+ KV VDPRMKKD R
Sbjct: 743 REKARQVKALYKKA-RQEPKKEVTYIVAKKHTAQKRAIRPPGVKGRYKV-VDPRMKKDLR 800
Query: 794 THGSGKARKGGSKKGNIGKARKGKGSVKASSKKGK 828
K + G +K G R K V+ + K K
Sbjct: 801 A-AKAKEKTKGRRKKTRGNNRGKKLRVRPKNMKRK 834
>gi|157169535|ref|XP_001657887.1| ribosomal RNA methyltransferase [Aedes aegypti]
gi|108883667|gb|EAT47892.1| AAEL001037-PA [Aedes aegypti]
Length = 852
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 303/849 (35%), Positives = 463/849 (54%), Gaps = 73/849 (8%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
GKV GK R DK+Y+LAKE GYRSRA++KL+QL+ +F FL+ S +DLCAAPGGWMQVA
Sbjct: 5 GKV-GKDRKDKFYKLAKETGYRSRAAFKLIQLNRRFGFLQQSQVCIDLCAAPGGWMQVAK 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
Q +PV S+V+G+DL PI + G +SL DIT + ++ + K E D+VL+DG+P
Sbjct: 64 QNMPVSSVVIGIDLFPIKNVPGCISLVGDITSDKTKSDLAK---ELKTWKADVVLNDGAP 120
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG W +A Q L + +VKLATQFL P G FVTKVFRS+DY+++++ LKQLF+KV
Sbjct: 121 NVGRNWLFDAYQQVCLTLSAVKLATQFLRPGGWFVTKVFRSKDYNALIWVLKQLFKKVHA 180
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQG-SVEPRKVVDVLRGTK--QKR 238
KP+ASR+ SAEI+++ Y+AP KIDPR LD KY+F+ VEP+ V++L+ + +K
Sbjct: 181 TKPSASRNESAEIFVVCQHYRAPDKIDPRFLDAKYVFEELDVEPQVKVNLLKEVEKAKKP 240
Query: 239 HRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKAL 298
+GY DG T +RK+ T+F+ PL +LG VT I F D AI +H TT E+K
Sbjct: 241 KVEGY-DG-TDVRKIITVTEFLKEEKPLGLLGRVTEIRFDD---KAISNHPRTTSEIKEC 295
Query: 299 CDDLRVLGKQDFKHLLKW-RMQIKKAFSSAEKATVPASASA-------------PTEGEN 344
C D++VLG++D + LLKW +M + F EKA EG++
Sbjct: 296 CKDIKVLGRKDLRDLLKWHKMMSSELFPQEEKAEEETKGKGKRVTKLNEQIEQEEAEGDD 355
Query: 345 EEDADNRVLN-EMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQI--DVMQDDYTDH 401
EE + + + E+ EL+ +Q KR++K K+RAK + + M I D + D
Sbjct: 356 EETVELKSMEKEIAELRKEEEQDAKRKRKKANKERAKLNEKLSLKMVIKGDEGPTEQADA 415
Query: 402 ELFSLSSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERR-KYDE 460
+FSL++++ KK + DD+ A D E +D + + +++ KYD+
Sbjct: 416 MMFSLNAVRSKKQM-------DDLLDADPDVLME---QDFHDDDDDGLPKKKQKFVKYDK 465
Query: 461 QLEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDL 520
+ + L + + K ++ +D E++D DSD
Sbjct: 466 ETKGDLYEDEKVLAQKSDDEDSDADLDREGLGLDDTEELQFENDDEAEEDVDSDNPDA-- 523
Query: 521 DANPLMVPLDDGIRPTQEEITNK---WFSQEIFAEAVQNGD---------LGKLGSEDET 568
NPL+ LD R +E+ K WF ++ F + D L ++ +
Sbjct: 524 -QNPLITDLD--YRDKEEKRRQKAQLWFEKDTFKNVLAGEDQAVDYDLDRLTEMYRKSGA 580
Query: 569 QVDKQAEK-HSIPEKAKQKMANDAAGPKSTHNQV---SEVEG---DFEIVPAPGADSSDD 621
++ +K + +KA+Q+ +D A S+ + +EVE + + V G +
Sbjct: 581 KIVGDDDKDRPLGKKARQRAKHDVAKEDSSSDDSDSEAEVEDQSYEHKTVEKIGGKDGFE 640
Query: 622 SSSDESEDEEVDTKAEILACAKKMLR-KKQREQILDDAYNRYMFDDDGLPDWFLEEERRH 680
S E +++V + LA + ++ KK + ++D A+NRYMF+D LP+WF+++E +
Sbjct: 641 VVSTEKREKKVKLNEQELALGQLLVSGKKTKRDLIDAAWNRYMFNDSNLPEWFVKDEEKT 700
Query: 681 RQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQAD 740
+ PV E K +E++ R KKV EAKARKK+ A ++LEK++KKA I + D
Sbjct: 701 MKKQAPVPHEVAETYKKNLEEMNVRSIKKVMEAKARKKKHATKRLEKIKKKAETIMENVD 760
Query: 741 ISDRSKRKQIEQLYKSAVPKRPKKEYVVAKK----GVQVRAGKGK----VLVDPRMKKDS 792
+++ K + +++LYK K+ YVVAKK G +VR KG +VDPRMKKD
Sbjct: 761 NTNQEKIRLLKKLYKKTDAKKKDITYVVAKKSGTSGKKVRRPKGVEGRFKVVDPRMKKDR 820
Query: 793 RTHGSGKAR 801
R + + R
Sbjct: 821 RAMDAKERR 829
>gi|451998084|gb|EMD90549.1| hypothetical protein COCHEDRAFT_1195737 [Cochliobolus
heterostrophus C5]
Length = 839
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 293/846 (34%), Positives = 469/846 (55%), Gaps = 84/846 (9%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K++FL S ++DLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYNFLEKSKVLIDLCAAPGSWCQVASEVMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
SL++G+DL PI PI ++ + DIT +CRA +++ ++ D VLHDG+PNVG
Sbjct: 68 ANSLIVGVDLAPIKPIPRCITFQSDITTDKCRATLRQHLKHLKC---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A +Q LV+ S+KLAT+FL GTFVTKVFRS+DY+S+L+ QLF KVE KP
Sbjct: 125 AWVQDAFTQAELVLQSMKLATEFLVEGGTFVTKVFRSKDYNSLLWVFNQLFTKVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ YKAP +DP+ LD + +F P V + +KR R+GY
Sbjct: 185 SSRNVSAEIFVVCRGYKAPKHLDPKFLDARSVFAELADPTPNNEAKVFKPEVKKRKREGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD T K + +DFI + +P+ +LG + ++F GD A + I TT+E++
Sbjct: 245 EEGDWTQFKEAPVSDFIQTTDPIAMLGGLNKLSFEQKPNGDIAIATIDKLPETTKEIRDC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEE-------DADNR 351
C DL+VLG+ DFK LL+WR+++++ F A K A A E EE D + +
Sbjct: 305 CADLKVLGRADFKRLLRWRLKVREIFGFASKKDKADEAKAKEAQEGEEVAEIESMDEEMQ 364
Query: 352 VLNEMEELKYAMDQRKKREKKLLAKKRAKDKAR----KATGMQIDVMQ-DDYTDHELFSL 406
+ E+E LK + KK++++ ++R K+ R AT I + Q + +F L
Sbjct: 365 IQEELERLKEKDTKAKKKQRRAENERRQKEITRLQMNMATPFDIGLEQVGPIGEDAMFGL 424
Query: 407 SSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVL 466
++ D A + + ++ +I+ + E + ++ LE L
Sbjct: 425 KAV--------------DKAGALNKIAKGKMVQIVEKEKPEEIEEELETDEEEDYLERDL 470
Query: 467 DQAYENYVAKRGGSTMQRKRAKKAYAQE---------DQLSEGDEDEDTMH---TSYDSD 514
D Y YV +R + RAK+A Q+ D+ E +DE+ + + + SD
Sbjct: 471 DAMYGEYVEQRSARDA-KYRAKRARKQDDDGEWNGFSDEDKEQSDDEELVQDADSDWSSD 529
Query: 515 KDQGDLDANPLMVPLD-DGIRPTQEEIT---NKWFSQEIF-----AEAVQNGDLGKLGSE 565
+++G L+ LD DG ++ +T ++F Q+IF + ++ D + E
Sbjct: 530 EEEG---PKELITDLDRDG--QSKRGLTKRAERFFDQDIFKGIDGLDDLEEDDDSGIDVE 584
Query: 566 DETQVDKQAEKHSIPEKAKQKMANDAAGPKSTHNQVS-------EVEGDFEIVPAPGADS 618
+T++ E+ ++P A +K + KS V+ E + E V
Sbjct: 585 GDTEM---KEESAMPPSASEKALSIRTSKKSASPAVAFDDESSDEDDDKIEEVARDETQW 641
Query: 619 SDDSSSDESEDEEVD-TKAEILACAKKMLR-KKQREQILDDAYNRYMFDD-DGLPDWFLE 675
DS ++ ++D AE + A +M +K + +LD+++NRY D DGLPDWFL+
Sbjct: 642 EQDSMPMKNGKPDIDIITAEAMTLAHQMATGQKTKHDLLDESFNRYSHRDVDGLPDWFLD 701
Query: 676 EERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVI 735
+E +H + RP + AA+K + + ++ARP KKV EA+ARKK A ++LEK++KK+ ++
Sbjct: 702 DENKHSKIQRPTSAAAAAAIKEKLRALNARPIKKVREAQARKKFKAAQRLEKLKKKSALL 761
Query: 736 SDQADISDRSKRKQIEQLYKSAVPKRPKKE--YVVAK---KGVQVR--AGKGKV-LVDPR 787
+D+ ++++ K + I +L A K+PK++ VVA+ KG++ R KGK +VD R
Sbjct: 762 ADEEGMTEKEKAQSIARLMSRAAKKKPKQKVSVVVARGGNKGIKNRPKGTKGKYKMVDAR 821
Query: 788 MKKDSR 793
+KKD R
Sbjct: 822 LKKDVR 827
>gi|325189292|emb|CCA23812.1| rRNA methyltransferase putative [Albugo laibachii Nc14]
Length = 874
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 303/877 (34%), Positives = 475/877 (54%), Gaps = 112/877 (12%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
KH DKYY LA++ GYR+R+++KL+QL+ K+ FL ++ +DLCAAPGGW QVA + +P
Sbjct: 6 KHDKDKYYLLARQQGYRARSAFKLIQLNKKYDFLSTAKVCIDLCAAPGGWCQVAAKYMPT 65
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
S+++G+DL+PI PIRG + + DIT +CR +++ M+ D+VL DG+PNVG
Sbjct: 66 SSIIIGIDLLPIRPIRGVKTFQCDITTAKCRQIIRQEMQNWQA---DVVLCDGAPNVGAE 122
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
++++A QN L + ++KLA + TFV+KVFRSQDY+++L+ +QLF+KV KP +
Sbjct: 123 YSKDAYVQNELSLVALKLAADVMGRGATFVSKVFRSQDYNALLWVFRQLFKKVSATKPLS 182
Query: 187 SRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEP--RKVVDVL--RGTKQKRHRDG 242
SR+ SAEI+++ + AP IDP+L D K +F+ +P K V + + QKRHRDG
Sbjct: 183 SRNESAEIFVVCEHFLAPHSIDPKLFDPKCVFEQLSDPAQNKTVTIFHPKFGVQKRHRDG 242
Query: 243 Y-EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDD 301
Y E TL DFI +++P++ L T+I FG+ + ++H TT E+ D
Sbjct: 243 YNETLGITLTNEKTVKDFIDASDPIQFLTDSTAIRFGE-GDTLYREHTSTTPEIITCLHD 301
Query: 302 LRVLGKQDFKHLLKWRMQI----KKAFSSAEKATVPASASAPTEGENEE-----DADNRV 352
LRVLGK DFKHLLKWR+++ K S+A P A + E E + D++ +
Sbjct: 302 LRVLGKADFKHLLKWRLKMIEYQKLLQSTASNEVGPTEAVSVEEAETDHISEKPDSETMI 361
Query: 353 LNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQ---IDVMQDDYTDHELFSLSSI 409
E+ +L+ + +KKREKK +K+ K + R A GM IDV + + +FSL+
Sbjct: 362 REELSQLRASSLAKKKREKKKDREKKRKQRVRVALGMSEEGIDVTEAE----SVFSLA-- 415
Query: 410 KGKKDLAAVEYDDDDVNAAAED-SEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQ 468
K L+ + DD + NAA E+ SEDE + V+ D DEE + +D
Sbjct: 416 --KLGLSKAKVDDLE-NAAPENVSEDE-------DEVNESSDDDEEEYDELLDTQ--MDS 463
Query: 469 AYENYVAKRG---GSTMQRKRAK--------KAYAQEDQLSEGDEDE-DTMHTSYDSDKD 516
Y+ ++++RG S +KR K +A AQ+ + +G+ D TM +S D
Sbjct: 464 MYDQFLSRRGEAVKSATIKKRTKVAKRALAGEALAQDSAMYDGNIDTYQTMINPDESSDD 523
Query: 517 QGDLDANPLMVPLDDGIRPTQEEITNKWFS-QEIFAEAVQNGDL---------------- 559
+G+ L V L T + + ++WFS ++F A+ L
Sbjct: 524 EGETPNEHLSVNLRFPELRTDKAVVSRWFSGNKLFEGALTPDTLISSMPKTDKILRKEKR 583
Query: 560 ------------GKLGSE--DETQVDKQAEKHSIPEKA-----------KQKMANDAAGP 594
KL +E D+ VD + H E A K+++ G
Sbjct: 584 KVAAERKDRREKKKLKAEQADDALVDVSSHTHDQEEFASSESEDETTAEKRELIRSGMGA 643
Query: 595 KSTHNQVSEVEG----DFEIVPAP-----GADSSDDSSSD-ESEDEEVDTKAEILACAKK 644
T + V+G FE+V A G + DD D E+E + + +A+ LA A
Sbjct: 644 ALTSDVSKSVDGGSASSFEVVKASEPDAFGLEVMDDRRYDSETEMYDSEDRAKTLALATM 703
Query: 645 MLRKKQREQILDDAYNRYMFDD-DGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEID 703
M+++ + ++I+D +YNRY ++D LP WF+++E +H + P+ + + M+ +F EI
Sbjct: 704 MIKRSKAKEIIDSSYNRYGWNDPKALPSWFVDDEEKHYRPQLPIPPKLMDQMRQRFLEIA 763
Query: 704 ARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPK 763
++P KKVAEA+ RKKR ++K + ++K++ I++Q D+S R K K IE+ K A K+
Sbjct: 764 SKPVKKVAEARQRKKRQQLKKAQLAKRKSSEIANQPDLSTREKLKAIEKTMKKAQLKKEN 823
Query: 764 KEYVVAKKGVQVRAGK------GKV-LVDPRMKKDSR 793
K YVV+++G + K G+V +VDPRMKKD R
Sbjct: 824 KVYVVSRRGGRTSTAKNAGSKGGRVKIVDPRMKKDKR 860
>gi|400596105|gb|EJP63889.1| AdoMet-dependent rRNA methyltransferase spb1 [Beauveria bassiana
ARSEF 2860]
Length = 829
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 296/834 (35%), Positives = 461/834 (55%), Gaps = 65/834 (7%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RAS+KLVQL+ K+ FL S +LDLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARASFKLVQLNKKYGFLEKSKVLLDLCAAPGSWCQVASEVMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V SL++G+DL PI PI ++ + DIT +CRA +++ ++ D VLHDG+PNVG
Sbjct: 68 VNSLIVGVDLSPIKPIPRVITFQSDITTEKCRATIRQHLKTWKA---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q++ +Q L + ++KLAT+FL GTFVTKVFRS+DY+ +L+ L QLF VE KP
Sbjct: 125 AWVQDSFNQAELALQAMKLATEFLVEGGTFVTKVFRSKDYNPLLWVLNQLFTHVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ YKAP +IDPR LD + +F P V +KR RDGY
Sbjct: 185 SSRNVSAEIFVVCRGYKAPKRIDPRFLDPRSVFAELAGATPNNEAKVYNPEVKKRKRDGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
++GD TL K A++FI + +P+ ILGS ++F GD A +A+ TT E++
Sbjct: 245 DEGDYTLYKEVPASEFIHTMDPIAILGSCNKLSFQQPLNGDVALAALDKLPETTPEIRDC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEE 358
C DL+ LG++DFK LLKWR++++ F A K A+AS E D + ++ E++
Sbjct: 305 CSDLKTLGRRDFKLLLKWRLRVRDIFGLATKEKAVAAASEEVAEVGEMDEELQIQEELQA 364
Query: 359 LKYAMDQRKKREKKLLAKKRAKDKARKATGM--QIDVMQDDYTDHELFSLSSIKGKKDLA 416
++ +KKREK+ +KR K+ R M +D+ ++ ++ ++K
Sbjct: 365 MRDRDSAKKKREKRRENEKRQKEIVRMQMNMISPMDIGMEEAGPIGEDAMFALKTADKTE 424
Query: 417 AVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENYVAK 476
A+ + A D+ +P D SD EE R LE LD YENY +
Sbjct: 425 AMRRLNRGKMATITDA---KPVDDRDSASDSDESDYEEDR-----LERDLDSMYENY-KE 475
Query: 477 RGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDANPLMVPLDDGIRPT 536
R + + RAKKA Q GD++ + + + + D L+ D+ P
Sbjct: 476 RKAESDAKYRAKKAREQ-----RGDDEWEGLSANEGEESDSSALEEEDDDSSTDEDEGPA 530
Query: 537 Q-------EEITN---------KWFSQEIF---AEAV-QNGDLGKLGSEDETQVDKQAEK 576
Q EE ++ +FSQ+IF EA+ + G + + +++ ++
Sbjct: 531 QGLLKTFDEEQSDANGLSSRAAAFFSQDIFKGITEALPKAGKIEEPVVDEDEEIRNLKPT 590
Query: 577 HSIPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESE--DEEVD- 633
+I + +++ A+ G T E G E++ GAD +D + +++ D ++D
Sbjct: 591 TNIGK--ERQTASSKNGRSGTRANTMENGGKPEVI--SGADEEEDWENTKTKRPDGQLDI 646
Query: 634 --TKAEILACAKKMLRKKQREQ-ILDDAYNRYMF-DDDGLPDWFLEEERRHRQAIRPVTK 689
AE + A ++ K+ Q ++DD +N++ F D DGLP+WF+E+E +H + +P+TK
Sbjct: 647 DIITAEAMTLAHQLASGKKTSQDVIDDGFNKHAFRDRDGLPEWFIEDESKHDKPHKPITK 706
Query: 690 EEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQ 749
A+K + + +ARP KKV EAKARKK A +KLE+++KK+++++ ++++ K
Sbjct: 707 AAAQAIKEKLRAFNARPIKKVREAKARKKIKAAQKLERLKKKSDMLAADEGMTEKEKADS 766
Query: 750 IEQLYKSAV---PKRPKKEYVV--AKKGVQVRAG--KGKV-LVDPRMKKDSRTH 795
I +L A P RP K V A +G++ R KG+ +VD RMKK+ R
Sbjct: 767 IAKLLGRAARKKPSRPAKLVVARGANRGIKGRPNGVKGRYRIVDARMKKELRAQ 820
>gi|322795549|gb|EFZ18245.1| hypothetical protein SINV_12039 [Solenopsis invicta]
Length = 833
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 304/858 (35%), Positives = 459/858 (53%), Gaps = 87/858 (10%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R DKYY+LAK+ GYRSRA++KL+QL+ KF FL+ S +DLCAAPGGWMQVA Q +P
Sbjct: 8 GKQRKDKYYQLAKDTGYRSRAAFKLIQLNRKFQFLQKSRVCIDLCAAPGGWMQVARQNMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V S+V+G+DL PI PI G SL +DIT +C+A + + ++ D+VL+DG+PNVG
Sbjct: 68 VSSVVVGVDLFPIKPIPGCFSLVEDITTDKCKAALSRELKTWKA---DVVLNDGAPNVGK 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
W +A Q+ L + ++KLATQFL P G F+TKVFRS+DY +++ LKQLFEKV KP
Sbjct: 125 NWLHDAFQQSVLTLSALKLATQFLRPGGWFITKVFRSKDYHPLIWVLKQLFEKVHATKPQ 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHRDGYE 244
ASR SAEI+++ Y AP K+DP+ D K++F + +E +++L K+K +GY
Sbjct: 185 ASRIESAEIFVVCQYYIAPDKVDPKFFDPKHVFSELQIETTNKLNILHPEKRKLKVEGYP 244
Query: 245 DGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLRV 304
+ D TL A F+ ++ +E L + + I D I HE TT+E++ C D++V
Sbjct: 245 ENDYTLYHQLSAKQFLACDDAVEALQNASEIVIDD---EFIDKHEKTTKEIRECCKDIKV 301
Query: 305 LGKQDFKHLLKWRMQIKKAFSSAEKATVP----ASASAPTEGENEEDADNRVLNEMEELK 360
LG++D K L+ W +KK + +A +A A E E+ D + ++ EL+
Sbjct: 302 LGRKDLKLLINWWKALKKTETETNEAKNTEEEITTAPAVNLEEEEDLEDEVIQKQIAELR 361
Query: 361 YAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHE---LFSLSSIKGKKDLAA 417
+ KR+KK K R K R +++ +D+ E LF L+ I+ + L
Sbjct: 362 EEETKELKRKKKKTKKDRQKLNER--LNLKMIHKRDEGPKLEAENLFKLNQIQTYEQLEQ 419
Query: 418 VEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEE---RRKYDEQLEEVLDQAYENYV 474
+ DV A SD+DSD+E + + E+ LD Y
Sbjct: 420 ITDQTPDVVA------------------ESDVDSDDEIKPKTIFYEKDAGHLDSKGLYYK 461
Query: 475 AKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDANPLMVPLDDGIR 534
++ ++ +++ L D D++ + D ++NPL+ LD R
Sbjct: 462 SEDNENSDTDVSDDDTNSEKSGLGLDDSDDENTKKP-QKKQQFKDPESNPLLTDLD--FR 518
Query: 535 PTQEEITNK---WFSQEIFAEAVQNGD-----LGK------------LGSEDETQ--VDK 572
+ + +K WF ++ F + ++N D L K LG E++TQ V++
Sbjct: 519 DKETKRIHKAALWFEKDAF-KNLENEDDADYELDKLIKEYKKIGGHVLGEEEKTQEKVEE 577
Query: 573 QAEKHSIPEKAKQKMANDAAGPKSTHNQVSEVEGD--FEIVPAPGADSSDDSSSDESEDE 630
+ +K I E D + + + ++ G FEIV S + + +
Sbjct: 578 KKQKRKISESDDSNSDYDVEEMMAPNKKSKKIGGQHGFEIV----------SKEADKKSK 627
Query: 631 EVDTKAEILACAKKMLR-KKQREQILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTK 689
+ E LA +++ KK R ++D A+NRY F+D+ LPDWF+++E +H + PV K
Sbjct: 628 KKKLSPEDLALGSLLIQSKKSRRDLIDSAWNRYAFNDEKLPDWFVKDEEKHMKKEVPVPK 687
Query: 690 EEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQ 749
E K + ++++ RP KKV EAKARKK+ AMRKLEK KK V+ + ADISD+ K +Q
Sbjct: 688 ELADEYKKRVEDLNVRPIKKVMEAKARKKKRAMRKLEKANKKVEVLMENADISDKEKARQ 747
Query: 750 IEQLYKSAVPKRPKKE--YVVAKK------GVQVRAGKGKV-LVDPRMKKDSRTHGSGKA 800
+ LYK A + PKK+ Y+VAKK V+ KG+ +VDPRMKKD R + +
Sbjct: 748 AKALYKKAR-RDPKKQVTYIVAKKHTAQKRAVRPPGVKGRYRVVDPRMKKDLRAAKAKEK 806
Query: 801 RKG-GSKKGNIGKARKGK 817
KG G K GN GK + K
Sbjct: 807 TKGRGKKSGNRGKKPRAK 824
>gi|189207701|ref|XP_001940184.1| AdoMet-dependent rRNA methyltransferase spb-1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187976277|gb|EDU42903.1| AdoMet-dependent rRNA methyltransferase spb-1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 835
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 294/834 (35%), Positives = 470/834 (56%), Gaps = 64/834 (7%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K++FL S ++DLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYNFLEKSKVLIDLCAAPGSWCQVASEVMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
SL++G+DL PI PI ++ + DIT +CRA +++ ++ D VLHDG+PNVG
Sbjct: 68 AHSLIVGVDLAPIKPIPRCITFQSDITTDKCRATLRQHLKHLKC---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A +Q LV+ S+KLAT+FLA GTFVTK+FRS+DY+S+L+ QLF KVE KP
Sbjct: 125 AWVQDAFTQAELVLQSMKLATEFLAEGGTFVTKIFRSKDYNSLLWVFNQLFAKVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ YKAP +DPR LD + +F P V + +KR R+GY
Sbjct: 185 SSRNVSAEIFVVCRGYKAPKNLDPRFLDARSVFAELADPTPNNEAKVFKPELKKRKREGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD T K + +DFI + +P+ +LG + ++F GD A + I TT+E++
Sbjct: 245 EEGDWTQFKEAPVSDFIQTTDPIAMLGGLNKLSFEQKPNGDIAVATIDKLPETTKEIRDC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKAT-VPASASAPTEGENEEDADNRVLNEME 357
C DL+VLG+ DFK LL+WR+++++ F A K T V A A E EE A+ ++E
Sbjct: 305 CADLKVLGRADFKRLLRWRLRVREIFGFATKKTKVEDEAKAKEAKEGEEVAEIESMDEEM 364
Query: 358 ELKYAMDQRKKREKKLLAKKRAKDKARK---ATGMQIDV-------MQDDYTDHELFSLS 407
+++ +++ K++E K K+R + RK T +Q+++ M+ D +F+L
Sbjct: 365 QIQEELERMKEKESKSKKKQRRAENERKQKEITRLQMNMTTPFELGMEQAGGDDSMFALK 424
Query: 408 SIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLD 467
++ D A +N A+ + + + +++ + E ++ LE LD
Sbjct: 425 AV----DKAGA------INKIAKG----KMAQIVEREKQEEVEEELETDDEEDHLERDLD 470
Query: 468 QAYENYVAKRGGSTMQRKRAKKAYAQEDQ-----LSEGD-EDEDTMHTSYDSDKDQG-DL 520
Y +YV +R + RAK+A Q+D S+ D E D D+D D D
Sbjct: 471 AMYGDYVEQRSARDA-KYRAKRARKQDDDGEWNGFSDEDKEQSDDEELVQDADSDWSDDE 529
Query: 521 DANP--LMVPLDDGIRPTQ--EEITNKWFSQEIF-----AEAVQNGDLGKLGSEDETQV- 570
+ P L+ LD+ + Q + ++F Q+IF + +++ + + E +T++
Sbjct: 530 EEGPKGLITDLDNEEQSKQGLTKRAARFFDQDIFKGIDGLDDLEDDEDSGIDVEGDTEMK 589
Query: 571 DKQAEKHSIPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDE 630
D+ PE P + + S+ E E V D+ ++
Sbjct: 590 DETVTSAPAPEAELSIRTTTNPAPSAFDEESSDDEDKIEEVARDETQWEQDNMPMKNGRP 649
Query: 631 EVD-TKAEILACAKKMLR-KKQREQILDDAYNRYMFDD-DGLPDWFLEEERRHRQAIRPV 687
++D AE + A +M +K + +LD+++NRY D DGLPDWFL++E RH + RP
Sbjct: 650 DIDIITAEAMTLAHQMATGQKSKHDLLDESFNRYSLRDVDGLPDWFLDDENRHSKLQRPT 709
Query: 688 TKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKR 747
T +A+K + + ++ARP KKV EA+ARKK A ++LEK++KK+ +++D+ ++++ K
Sbjct: 710 TAAAASAIKEKLRALNARPIKKVREAQARKKFKAAQRLEKLKKKSALLADEEGMTEKEKA 769
Query: 748 KQIEQLYKSAVPKRPKKE--YVVAK---KGVQVR--AGKGKV-LVDPRMKKDSR 793
+ I +L A K+PK++ +VAK KG++ R KGK +VD R+KKD R
Sbjct: 770 QSIARLMSRAAKKKPKQKVSVIVAKGGNKGIKNRPKGTKGKYKMVDARLKKDVR 823
>gi|242763691|ref|XP_002340625.1| rRNA methyltransferase Spb1, putative [Talaromyces stipitatus ATCC
10500]
gi|218723821|gb|EED23238.1| rRNA methyltransferase Spb1, putative [Talaromyces stipitatus ATCC
10500]
Length = 798
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 303/827 (36%), Positives = 463/827 (55%), Gaps = 83/827 (10%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K+ FL S +LDLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
GSL++G+DL PI PI ++ + DIT +CR+ ++ ++ ++A D VLHDG+PNVG
Sbjct: 68 AGSLIVGVDLAPIKPIPRVITFQSDITTDKCRSTLRSHVKH--LKA-DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A +Q LV+ S+KLAT+FL GTFVTKVFRS+DY+ +L+ KQLF VE KP
Sbjct: 125 AWVQDAFTQAELVLQSMKLATEFLREGGTFVTKVFRSKDYNPLLWVFKQLFTSVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ +KAP ++DP+ LD +++F P V K+KR R+GY
Sbjct: 185 SSRNVSAEIFVVCRGFKAPKRLDPKFLDPRHVFAELADPTPNNEAKVFNPEKKKRKREGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD T K T+FI + +P+ ILG+ +++F GD A + ++ E TT E++
Sbjct: 245 EEGDYTQHKEISVTEFINTTDPIAILGTYHTLSFQQSPSGDLALATLERLEETTNEIRKC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNE--- 355
C+DLRVLGK++F++LLKWR+++++ F K T+ E EE A+ +++
Sbjct: 305 CEDLRVLGKKEFRNLLKWRLKVREKFGLTVK-------KKKTQDEGEEVAEVAPMDDELA 357
Query: 356 -MEELKYAMD----QRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSIK 410
EEL+ D QRKK +K +KR KD R MQ+ ++ E +
Sbjct: 358 IQEELQRLRDNENAQRKKERRKENERKR-KDIVR----MQMHMITPTDIGMEQAGIGGDN 412
Query: 411 GKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAY 470
+ AV ++ AA+ + E S +EE ++QLE LD Y
Sbjct: 413 TMFAMKAVNREN-----AADKIASGKMVELESEDESEASSGEEETDDEEDQLERELDSLY 467
Query: 471 ENYVAKRG--GSTMQRKRAKKAYAQEDQLSEG-DEDEDTMHTSYDSDKDQGDLDANPLMV 527
E Y ++ S ++ K+A+K Y E+ EG E + D + D L + L
Sbjct: 468 ETYQEQKHDRDSKLRAKKARKDYEAEEW--EGFSGSEKGEDSDEDVEDDDSSLLSTKLPQ 525
Query: 528 PLDDGIRPTQEEITNKWFSQEIFAEAVQNGDLGKLGSEDET--QVDKQAEKHSIPEKAKQ 585
P G Q + +F Q+IF E ++ ++ +L ED D+ A K + AK
Sbjct: 526 P---GNLSNQAAL---FFDQDIF-EGLE--EINELDDEDSAIDMEDRPARKSAKESVAKS 576
Query: 586 KMANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSD----ESEDEEVD---TKAEI 638
K P +T Q + G DSSD+ + ++D +D AE
Sbjct: 577 KDVK----PSTTEEQQED-----------GWDSSDEEAEKPDDPRTKDGRLDIDIITAEA 621
Query: 639 LACAKKMLR-KKQREQILDDAYNRYMF-DDDGLPDWFLEEERRHRQAIRPVTKEEIAAMK 696
+A A+++ +K + + D+ +N+Y F D DGLP+WFL++E +H + RPVTK AA+K
Sbjct: 622 MALAQQIATGEKTTQDVADEGFNKYAFRDKDGLPEWFLDDESKHSRPQRPVTKAAAAAIK 681
Query: 697 AQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKS 756
+ + I+ARP KKV EAKARKK ++LEK+RKK+ ++++ +S++ K + I +L
Sbjct: 682 EKLRAINARPIKKVREAKARKKFKVAQRLEKLRKKSALLAEDESVSEKDKAQAIAKLMSK 741
Query: 757 AVPKRPKKEYVV-----AKKGV--QVRAGKGKV-LVDPRMKKDSRTH 795
A K+PK++ + A +G+ + R KGK +VD RMKKD R
Sbjct: 742 AAKKKPKQKVKLVVAKGANRGISGRPRGVKGKYKIVDSRMKKDIRAQ 788
>gi|212529376|ref|XP_002144845.1| rRNA methyltransferase Spb1, putative [Talaromyces marneffei ATCC
18224]
gi|210074243|gb|EEA28330.1| rRNA methyltransferase Spb1, putative [Talaromyces marneffei ATCC
18224]
Length = 794
Score = 401 bits (1030), Expect = e-108, Method: Compositional matrix adjust.
Identities = 290/826 (35%), Positives = 459/826 (55%), Gaps = 68/826 (8%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K+ FL S +LDLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
GSL++G+DL PI PI ++ + DIT +CR+ ++ ++ ++A D VLHDG+PNVG
Sbjct: 68 AGSLIVGVDLAPIKPIPRVITFQSDITTDKCRSTLRSHVKH--LKA-DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A +Q LV+ S+KLAT+FL GTFVTKVFRS+DY+ +L+ KQLF VE KP
Sbjct: 125 AWVQDAFTQAELVLQSMKLATEFLREGGTFVTKVFRSKDYNPLLWVFKQLFTSVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ +KAP ++DP+ LD +++F P V K+KR R+GY
Sbjct: 185 SSRNVSAEIFVVCRGFKAPKRLDPKFLDPRHVFAELSDPTPNNEAKVFNPEKKKRKREGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD T K T+FI + +P+ ILG+ +++F GD A + ++ E TT+E++
Sbjct: 245 EEGDYTQHKEISVTEFINTTDPIAILGTYHTLSFQQSPTGDLALATLERLEETTDEIRKC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEE 358
C DLRVLGK++F++LLKWR+++++ F K D + + E++
Sbjct: 305 CQDLRVLGKKEFRNLLKWRLKVREKFGLVVKKKKTQEEGEEVAEVAPMDEELAIQEELQR 364
Query: 359 LKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSIKGKKDLAAV 418
L+ + ++K+E++ +++ KD R MQ+ ++ E + + AV
Sbjct: 365 LRDNENSQRKKERRKENERKRKDIVR----MQMHMITPTDIGMEQGGIDGANTMFAMKAV 420
Query: 419 EYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENYVAKRG 478
++ AA+ + + E S +EE ++QLE LD YE + ++
Sbjct: 421 NREN-----AADKIASGKMDELESEEESEASSVEEETDDEEDQLERELDSLYETFQEQKQ 475
Query: 479 --GSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDAN-PLMVPLDDGIRP 535
S ++ K+A+K Y E DE E + + D D D + P +P +
Sbjct: 476 DRDSKLRAKKARKDY-------EADEWEGFSGSDKEEASDDEDDDISLPSTLPQSGNL-- 526
Query: 536 TQEEITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKMANDAAGPK 595
+ + +F Q++F +L S ++ + + S E K K A P
Sbjct: 527 --SKQASLFFDQDVFEGLEDIDELDDEDS--AIDMEDRPPRQSTKEVVKSKNAE----PS 578
Query: 596 STHNQVSEVEGDFEIVPAPGADSSDDSSSD----ESEDEEVD---TKAEILACAKKMLR- 647
+T +Q + G SSD+ + ++D +D AE +A A+++
Sbjct: 579 TTKDQEED-----------GWGSSDEETEKPDDPRTKDGRLDIDIITAEAMALAQQIATG 627
Query: 648 KKQREQILDDAYNRYMF-DDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARP 706
+K + + DD +N+Y F D DGLP+WFL++E +H + RPVTK AA+K + + I+ARP
Sbjct: 628 EKTAQDMTDDGFNKYAFRDKDGLPEWFLDDEGKHSRPHRPVTKAAAAAIKEKLRAINARP 687
Query: 707 AKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKEY 766
KKV EAKARKK ++LEK+RKK+ ++++ +S+R K + I +L A K+PK++
Sbjct: 688 IKKVREAKARKKFKVAQRLEKLRKKSALLAEDEGVSERDKAEAIAKLMSKAAKKKPKQKV 747
Query: 767 VV-----AKKGV--QVRAGKGKV-LVDPRMKKDSRTHGS-GKARKG 803
+ A +G+ + R KGK +VD RMKKD R KA+KG
Sbjct: 748 KLVVAKGANRGISGRPRGVKGKYKIVDSRMKKDIRAQKRVAKAQKG 793
>gi|357610723|gb|EHJ67114.1| putative ribosomal RNA methyltransferase [Danaus plexippus]
Length = 847
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 300/873 (34%), Positives = 471/873 (53%), Gaps = 81/873 (9%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R DKYY+LAKE G+RSRA++KL+QL+ KF FL+ S +DLCAAPGGWMQVA Q +P
Sbjct: 8 GKQRKDKYYQLAKETGFRSRAAFKLIQLNRKFGFLQKSRVCIDLCAAPGGWMQVAHQNMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V S+V+G+DL PI + G +SL +DIT +C+ +KK E D+VLHDG+PNVG
Sbjct: 68 VSSVVIGVDLFPIKQVPGCISLTEDITTEKCKTAIKK---EIKTWKADVVLHDGAPNVGL 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
W +A Q L + ++KLA+ FL G FVTKVFRS+DY ++L+ LKQ F+KV KP
Sbjct: 125 NWIHDAYQQACLTLSALKLASHFLREGGWFVTKVFRSKDYHALLWVLKQFFKKVHATKPQ 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQG-SVEPRKVVDVLRGTKQKRHR-DGY 243
ASR+ S+EI+++ Y AP IDP+LLD K++F+ + ++ +++L KQK+ + +GY
Sbjct: 185 ASRNESSEIFVVCQGYIAPDSIDPKLLDPKHVFEDLEIVKKQQMNLLHPEKQKKPKAEGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLR 303
++ D T ++F+ +P+++L + I D ++ H TT+E+ C D++
Sbjct: 245 KENDYTTYHSVPISEFLDKEDPIDLLQGCSEIIIDD---KSVLSHPKTTKEIIECCKDIK 301
Query: 304 VLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEE---DADNRVLNEMEELK 360
VLG++D K LL W + K + +++ AT + E EE D +++V NE+ +L+
Sbjct: 302 VLGRKDVKALLSWIKHL-KDWKASQNATEETEKKDDNDKEVEEASGDENDKVDNEIADLQ 360
Query: 361 YAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDD---YTDHELFSLSSIKGKKDLAA 417
++ KR++K L K+R K + +++ + DD H++FSLS IK + L
Sbjct: 361 DEEKRQLKRKRKQLNKQRQ--KLAEKMNLKMVLKGDDGPILESHDMFSLSDIKNTQQLNM 418
Query: 418 VEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENYVAKR 477
+ D+ EDS+DE + + V DI E K D + + ++ +
Sbjct: 419 IVDQQPDIVLEKEDSDDELKKK--AKFVKYDI----EESKLDSS--GLFYKDSDSELEME 470
Query: 478 GGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDS--DKDQGDLDANPLMVPLDD---- 531
S ++++ A++ D S+ + ++T +S K++ NPL+ LDD
Sbjct: 471 SDSDDEKEKETLAFSDSDNESKKIDKLTKLNTLRNSKISKEKPIPKNNPLLTDLDDTDPV 530
Query: 532 GIRPTQEEITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKMANDA 591
R + E+ WF ++ F E + D G +DK AE + K + ++
Sbjct: 531 SKRTKKAEL---WFEKDSFKEVDEEDDEG-------VDLDKLAETYRGKGKKVKDLSMGI 580
Query: 592 AGPKST-------------HNQVSEVEGDFEIVPAPGADSS-DDSSSDESEDEE------ 631
+ K + + +VE + GA ++ D ++D E
Sbjct: 581 SDIKKSGVKRKNEESSEESSDSDYDVEENVSPTDKSGAKTTKKDGFEVVTQDPELKRLKK 640
Query: 632 -VDTKAEILACAKKM-LRKKQREQILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTK 689
+ AE LA + KK + ++DD +NRY F+D LPDWF+E+E++H + V +
Sbjct: 641 NLKMDAETLALGTMIATSKKFKRDLIDDGWNRYAFNDTNLPDWFVEDEKKHMRKDIVVPE 700
Query: 690 EEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQ 749
+ K + ++I+ARP KKV EAKARKK+ ++K+E+ +KK + + AD+S+R K +Q
Sbjct: 701 KYTEEYKNRLQDINARPIKKVVEAKARKKKRMIKKMERAKKKVEAVMENADMSEREKAQQ 760
Query: 750 IEQLYKSAVPKRPKK-EYVVAKKGVQVR--------AGKGKVLVDPRMKKDSRTHGSGKA 800
+ QLYK A + KK YVVAKK + G+ KV VDPRMKKD R + +
Sbjct: 761 VRQLYKKAQTENKKKVTYVVAKKHTTAKRMKRPTGVKGQYKV-VDPRMKKDLRAQKAKEK 819
Query: 801 RKG-GSKKGNIGKARKGKGSVKASSKKGKKGNK 832
KG G K G GK K + + KKGNK
Sbjct: 820 TKGRGKKAGKTGKTNKQRPA-------KKKGNK 845
>gi|358060513|dbj|GAA93918.1| hypothetical protein E5Q_00564 [Mixia osmundae IAM 14324]
Length = 893
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 308/933 (33%), Positives = 482/933 (51%), Gaps = 174/933 (18%)
Query: 1 MGKVK---GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWM 57
MGK + GK RLDK+Y+LAKE GYR+R+++KL+Q++ K+ FL S+ +DLCAAPGGW+
Sbjct: 1 MGKSQKKTGKGRLDKWYKLAKEQGYRARSAFKLIQINKKYQFLESARCCIDLCAAPGGWL 60
Query: 58 QVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117
QVA + +P S+++G+DLV I PI V++ +DIT CR ++ +++ D+VLH
Sbjct: 61 QVASKAMPPNSVIVGIDLVAIKPIARCVTIAEDITTDACRRAIRAEVKDWKA---DVVLH 117
Query: 118 DGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFE 177
DG+PNVG AW Q+A +Q LV+ S+KLAT+FLAP GTFVTKVFRS DY+S+++ QLF+
Sbjct: 118 DGAPNVGTAWIQDAFTQAELVLASLKLATEFLAPGGTFVTKVFRSSDYNSLMFVFNQLFK 177
Query: 178 KVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF------------------- 218
+VE KP +SR+ SAEI+++ + AP KIDPR LD K +F
Sbjct: 178 RVEATKPPSSRNVSAEIFVVCQGFLAPRKIDPRFLDAKSVFSDLDMMAATSAKSAGEDTE 237
Query: 219 -QGSVEPRKV-------VDVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILG 270
+G +PRK+ ++V K++R+R+GY DGD TL + A ++I + +P+++L
Sbjct: 238 AEGG-KPRKINKLTPNALNVFHPEKKRRNREGYADGDYTLHHTTPANEYITTRDPIDLLA 296
Query: 271 SVTSITFGDPACSAIKDHELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKA 330
I+F + + TTE+++ C+DL+VLGK++FK LLKWR +I+ ++
Sbjct: 297 RTNKISFESTEELELLKNAETTEDIRVSCEDLKVLGKREFKQLLKWRSKIR-----LQRG 351
Query: 331 TVPASASAPTEG---ENEEDADNRVLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKAT 387
AP E + + + E++ LK RK+R+++ L +K+A+D R
Sbjct: 352 LDVKHVPAPEETAVEVEPLNEEEELEQEVDRLKTEEANRKRRDRRRLNEKKARDLQRMQL 411
Query: 388 GMQ----IDVMQDDYTDHELFSLSSIKGKKD-LAAVEYDDDDVNAAAEDSEDERPNRDTQ 442
M I + + D D+ +F LS+I G+ + + +D D D E RP++ Q
Sbjct: 412 HMTTPADIGLERQDGMDN-IFELSAIDGRSNRIGQTGFDSD-------DEESLRPSKPKQ 463
Query: 443 --EHVSSDIDSDEERRKYD----EQLEEVLDQAYENYVAKR--GGSTMQRKRAKKAYAQE 494
HV + D DE+ + Q E LD+ Y++Y ++ S Q K A+K E
Sbjct: 464 IIPHVEDESDEDEDISDEEELRIRQAERDLDRQYDSYQNRKLEKDSRYQVKEARKKRDAE 523
Query: 495 DQLSEGDED-----EDTMHTS---------YDSDKD-------QGDLDANP--------- 524
+ + G ED ED M DSD + +GD+DA
Sbjct: 524 EGVWGGIEDAAQSSEDEMTLGAASQKRARQLDSDDEEVDESDVEGDVDAEAEAIMASRGH 583
Query: 525 ----------LMVPLDDGIRPTQEEITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQA 574
+V G T+ + WF Q F + +Q D +G ED +
Sbjct: 584 VRSKEGKLIQSLVNKKAGTAETKARAADLWFDQPAFRD-IQGLD-ALMGLEDASP----- 636
Query: 575 EKHSIPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVD- 633
S+P S+ ++ E + + +++P D D SDES EEV
Sbjct: 637 ---SVP---------------SSADEGKEEDEEVDMLP----DIEDREDSDESGFEEVAM 674
Query: 634 ---------------------------TKAEILACAKKML-RKKQREQILDDAYNRYMFD 665
T E ++ A++++ R+ ++++LD+ + R+ F+
Sbjct: 675 DADPDEWLKAGEEEEERKRERIERLGLTTVEAVSIAQRLVNREVTKDELLDEGFTRHAFN 734
Query: 666 D-DGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRK 724
D DGLP WFL++E +H + PVTKE A+K + + ++ARP KK+AEAKARKK +R+
Sbjct: 735 DKDGLPSWFLDDEMKHFRHNIPVTKEASDALKEKVRALNARPIKKIAEAKARKKMRTLRR 794
Query: 725 LEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKEY---VVAKKGVQVRAGKGK 781
LEK +KKA+ +++ DI+++ K I ++ + +P K VV KG R KG+
Sbjct: 795 LEKAQKKADTVNETDDITEKEKAASIAKILAKSGGNKPAKRREIKVVVAKGAN-RGQKGR 853
Query: 782 V--------LVDPRMKKDSRTHGSGKARKGGSK 806
+VDPR KK+ R R G K
Sbjct: 854 PKGVKGRYKMVDPRGKKEIRAEKRIARRDAGKK 886
>gi|347969042|ref|XP_311882.5| AGAP003002-PA [Anopheles gambiae str. PEST]
gi|333467724|gb|EAA07890.5| AGAP003002-PA [Anopheles gambiae str. PEST]
Length = 917
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 305/900 (33%), Positives = 460/900 (51%), Gaps = 153/900 (17%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R DK+Y+LAKE GYRSRA++KL+QL+ +F FL+ S LDLCAAPGGWMQVA Q +P
Sbjct: 8 GKDRRDKFYKLAKESGYRSRAAFKLIQLNRRFGFLQQSQVCLDLCAAPGGWMQVAKQNMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V S+V+G+DL PI + G +SL DIT + +A + K ++ V D+VL+DG+PNVG
Sbjct: 68 VSSIVIGVDLYPIKNVPGCISLIGDITSDKTKADLAKELKTWKV---DVVLNDGAPNVGK 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
W +A Q L + +VKLATQFL P G F+TKVFRS+DY+++++ LKQLF KV KP+
Sbjct: 125 NWLHDAYQQVCLTLSAVKLATQFLRPGGWFITKVFRSKDYNALIWVLKQLFRKVHATKPS 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ------GSVEPRKVVDVL-RGTKQKR 238
ASR SAEI+++ YKAP KIDPR LD KY+F+ + ++ L R T +K
Sbjct: 185 ASRKESAEIFVVCQYYKAPDKIDPRFLDSKYVFEELDIQSKDISSNNILKELERKTPKKP 244
Query: 239 HRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKAL 298
+GY+ D +RK+ A +++ S+ PL +L VT ITF A AI +H TT E+K
Sbjct: 245 KVEGYDSTD--VRKIITALEYMQSDKPLALLSRVTEITFT-KADEAIANHPRTTTELKEC 301
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDAD--------- 349
C D+++LG++D K LL+W + F+ A + + +GE E+ A
Sbjct: 302 CKDIKILGRKDIKELLRWHKLLSPEFTEAGED---KADDKKKKGEGEDGAKDDDDEETDV 358
Query: 350 -------NRVLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQI--DVMQDDYTD 400
++ E+ L+ ++ KR +K K+RAK + + M I D + +
Sbjct: 359 DEEIVELKQIEKEIATLQKEEERSSKRMRKKTNKERAKLNEKLSLKMVIKGDAGPTEQGE 418
Query: 401 HELFSLSSIKGKKDLAAV-------EYDDDDVNAAAEDSEDERPNRDTQ-EHVSSDIDSD 452
+FSL + ++ L ++ +D + AED E R +R+T+ + D
Sbjct: 419 DMVFSLKDVGTRQQLESILDQAPDFVVEDKSDDEGAEDGEYVRYDRETKGDLFEDDKLLS 478
Query: 453 EERRKYDEQLEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYD 512
+R D +++ D+ G M+ + +++LS +EDED S D
Sbjct: 479 TQRADSDSEIDSDFDEK---------GLAME--------SDDEELS-FEEDEDMKDPSDD 520
Query: 513 SDKDQGDLDANPLMVPLD-----------------------DGIRPTQEEITNKWFSQEI 549
D+ NPL+ LD ++P EE+ + + +
Sbjct: 521 EDR-------NPLITDLDYRSKVDKRLHRAQLWYEQEAFKKHNLQPNDEEVVD--YDLDK 571
Query: 550 FAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKMANDA------------------ 591
EA + + LG+E DK E + +KA+++ +D
Sbjct: 572 MIEAYKKAGVTVLGTEG---ADKGKESEPLGKKARRRSKHDVNKLDGDESSDSSSSSEDE 628
Query: 592 -------AGPKSTHNQVSEV----EGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILA 640
A H + +V EG FEIV SS + +++ E LA
Sbjct: 629 DEPQNAQAVGTMVHKTIEKVGGDSEGGFEIV----------SSEKVRKPKKIKLSEEELA 678
Query: 641 CAKKMLR-KKQREQILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQF 699
+ ++ KK R I+D A+NRYMF+D LPDWF+ +E + Q PV ++ + +
Sbjct: 679 LGQMIISGKKTRRDIIDAAFNRYMFNDTNLPDWFVADELKTMQRHLPVPEDVVEKYRKSK 738
Query: 700 KEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVP 759
E + R KKV EAKARKKR A ++LEK++KKA I + D +++ K + +++LYK A
Sbjct: 739 DEFNVRTIKKVMEAKARKKRHATKRLEKIKKKAETIMENVDNTNQEKIRLLKKLYKKADA 798
Query: 760 KRPKKEYVVAKK----GVQVRAGKGK----VLVDPRMKKD----------SRTHGSGKAR 801
K+ YVVAKK G +VR KG +VDPRMKKD S+ HG G+ +
Sbjct: 799 KKKDVTYVVAKKTGVSGKKVRRPKGVEGRFKVVDPRMKKDRRAEMAKDKRSKKHGKGRGK 858
>gi|330916102|ref|XP_003297295.1| hypothetical protein PTT_07642 [Pyrenophora teres f. teres 0-1]
gi|311330112|gb|EFQ94603.1| hypothetical protein PTT_07642 [Pyrenophora teres f. teres 0-1]
Length = 835
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 293/842 (34%), Positives = 469/842 (55%), Gaps = 80/842 (9%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K++FL S ++DLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYNFLEKSKVLIDLCAAPGSWCQVASEVMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
SL++G+DL PI PI ++ + DIT +CRA +++ ++ D VLHDG+PNVG
Sbjct: 68 AHSLIVGVDLAPIKPIPRCITFQSDITTDKCRATLRQHLKHLKC---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A +Q LV+ S+KLAT+FLA GTFVTK+FRS+DY+S+L+ QLF KVE KP
Sbjct: 125 AWVQDAFTQAELVLQSMKLATEFLAEGGTFVTKIFRSKDYNSLLWVFNQLFAKVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ YKAP +DPR LD + +F P V + +KR R+GY
Sbjct: 185 SSRNVSAEIFVVCRGYKAPKNLDPRFLDARSVFAELADPTPNNEAKVFKPELKKRKREGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD T K +DFI + +P+ +LG + ++F GD A + I TT+E++
Sbjct: 245 EEGDWTQFKEVPVSDFIQTTDPIAMLGGLNKLSFEQKPNGDIAVATIDKLPETTKEIRDC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKAT-VPASASAPTEGENEEDADNRVLNEME 357
C DL+VLG+ DFK LL+WR+++++ F A K T V A E EE A+ ++E
Sbjct: 305 CADLKVLGRADFKRLLRWRLRVREIFGFATKKTKVEEEAKTKEVKEGEEVAEIESMDEEM 364
Query: 358 ELKYAMDQRKKREKKLLAKKRAKDKARK---ATGMQIDV-------MQDDYTDHELFSLS 407
+++ +++ K++E K K+R + RK T +Q+++ M+ D +F+L
Sbjct: 365 QIQEELERMKEKESKSKKKQRRAENERKQKEITRLQMNMTTPFELGMEQAGGDDSMFALK 424
Query: 408 SIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLD 467
++ D A +N A+ + + + +++ + E ++ LE LD
Sbjct: 425 AV----DKAGA------INKIAKG----KMAQIVEREKQEEVEEELETDDEEDHLERDLD 470
Query: 468 QAYENYVAKRGGSTMQRKRAKKAYAQE---------DQLSEGDEDEDTMH---TSYDSDK 515
Y +YV +R + RAK+A Q+ D+ E +DE+ + + + D+
Sbjct: 471 AMYGDYVEQRSARDA-KYRAKRARKQDDDGEWNGFSDEDKEQSDDEELVQDAESDWSDDE 529
Query: 516 DQGDLDANPLMVPLDDGIRPTQ--EEITNKWFSQEIF----------AEAVQNGDL-GKL 562
++G L+ LD+ + Q + ++F Q+IF + DL G
Sbjct: 530 EEG---PKGLITDLDNEEQSKQGLTKRAARFFDQDIFKGIDGLDDLEDDEDSGIDLEGDT 586
Query: 563 GSEDETQVDKQAEKHSIPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDDS 622
+DET A + + + K A P + + S+ E E V D+
Sbjct: 587 EMKDETVTPTPATEAELSIRTTTKPA-----PSAFDGESSDDEDKIEEVARDETQWEQDN 641
Query: 623 SSDESEDEEVD-TKAEILACAKKMLR-KKQREQILDDAYNRYMFDD-DGLPDWFLEEERR 679
++ ++D AE + A +M +K + +LD+++NRY D DGLPDWFL++E R
Sbjct: 642 MPMKNGRPDIDIITAEAMTLAHQMATGQKSKHDLLDESFNRYSLRDVDGLPDWFLDDENR 701
Query: 680 HRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQA 739
H + RP T +A+K + + ++ARP KKV EA+ARKK A ++LEK++KK+ +++D+
Sbjct: 702 HSKLQRPTTAAAASAIKEKLRALNARPIKKVREAQARKKFKAAQRLEKLKKKSALLADEE 761
Query: 740 DISDRSKRKQIEQLYKSAVPKRPKKE--YVVAK---KGVQVR--AGKGKV-LVDPRMKKD 791
++++ K + I +L A K+PK++ +VAK KG++ R KGK +VD R+KKD
Sbjct: 762 GMTEKEKAQSIARLMSRAAKKKPKQKVSVIVAKGGNKGIKNRPKGTKGKYKMVDARLKKD 821
Query: 792 SR 793
R
Sbjct: 822 VR 823
>gi|389742249|gb|EIM83436.1| FtsJ-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 876
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 308/886 (34%), Positives = 455/886 (51%), Gaps = 117/886 (13%)
Query: 1 MGKVK---GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWM 57
MGK + GK RLDKYY+LAKE GYR+R+++KL+QL+ K+SFL SS +DLCAAPGGW+
Sbjct: 1 MGKAQKKTGKGRLDKYYKLAKEQGYRARSAFKLIQLNKKYSFLESSRCCIDLCAAPGGWL 60
Query: 58 QVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117
QVA + +PV SL++G+DLVPI PI + DIT CR ++ +++ D+VLH
Sbjct: 61 QVASKYMPVNSLIVGVDLVPIKPIPRVSTFAADITTSHCRNLLRGELKDWKA---DVVLH 117
Query: 118 DGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFE 177
DG+PNVG AW Q+A SQ+ LV+ S+KLA +FL GTFVTKVFRS DY+++++ QLF
Sbjct: 118 DGAPNVGTAWVQDAYSQSELVLMSLKLAVEFLIKGGTFVTKVFRSVDYNNLIWVFNQLFG 177
Query: 178 KVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ-----------GSVEPRK 226
KVE KP +SR+ SAEI+++ + AP IDP+ LD K++F+ GS
Sbjct: 178 KVEATKPPSSRNVSAEIFVVCRDFHAPKHIDPKFLDPKHVFKDLSATTATGDKGSSANNV 237
Query: 227 VVDVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIK 286
+V + K +R R+GY DGD L ++F+ S P+ +LGSV + F
Sbjct: 238 QANVFQPEKSRRKREGYADGDYILFNKVGVSEFVNSAEPIAVLGSVNQMVFQTEEEKEWA 297
Query: 287 DHELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEE 346
++TT +VKA DDL+VLGK DFK LLKWR +++ K A+ E +
Sbjct: 298 AMDITTTDVKANLDDLKVLGKGDFKTLLKWRTALREELGLDVKTKSTEDATEVVEITEDI 357
Query: 347 DADNRVLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQ----IDVMQDD---YT 399
D + ++ E+E L R KRE++ + + + R M I + Q D
Sbjct: 358 DEEEQIQKELERLNAEASARTKRERRKANEVKTRTIQRMQLSMTAPLDIGLEQQDQALIA 417
Query: 400 DHELFSLSSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSD----IDSDEER 455
D ++F L D V V+ A ++DE + + E S +DSDEER
Sbjct: 418 DEDMFDLG------DTERVLKKKGGVSKFASRNQDEDESEEEDEEESESEEEGLDSDEER 471
Query: 456 RKYDEQLEEVLDQAYENY---VAKRGGSTM---QRKRAK--------------------- 488
K + LE+ LD Y++Y +A+R RK+ K
Sbjct: 472 EKKTKGLEDELDGLYDSYKERLAERDSKYKVKEARKKNKEREEWHGIKEAKDGSSDEEED 531
Query: 489 ---------KAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDANPLMV-----------P 528
KA + DQ S DE+ D+ D D G P V
Sbjct: 532 EEGGWDVMQKAKGRNDQSS--DEESDSNEEVEDQDVSAGQKRRRPGQVQENGKKKARFAT 589
Query: 529 LDDGIRPTQEEITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKMA 588
D + P + WFSQ++F +G SE+E+ +D + + ++
Sbjct: 590 EDAKVVPASSRAADLWFSQDVFGG--MDGLDAIPDSEEESGLDAEDVETEEEASEEEADE 647
Query: 589 NDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTK--------AEILA 640
A SE + DFE+VP D+ +DE+EDE + AE +
Sbjct: 648 PSA----------SEDDDDFEVVPQEPDDTDMWDVADENEDEAKQAQIRKHGLLTAEAVT 697
Query: 641 CAKKML-RKKQREQILDDAYNRYMFDD-DGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQ 698
A++++ R+ + ++++ + RY + D LPDWFL++E +H A P+TKE I +++A+
Sbjct: 698 LAQQLVNRQTTKTDLINEGFTRYSLNSKDDLPDWFLDDESKHYMANIPITKEAIQSLRAK 757
Query: 699 FKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYK--- 755
+ +DARP KKVAEAKARKK A ++L+K KKA ++ D+++R K +Q+E+L +
Sbjct: 758 QRALDARPIKKVAEAKARKKFKAAQRLDKAMKKAEGVTQTDDMTEREKAQQVEKLMRKGL 817
Query: 756 SAVPKRPKKEYVVAKKGVQVRAGKGK--------VLVDPRMKKDSR 793
S K K VV KGV R KG+ +VD RMKK+ R
Sbjct: 818 SKGKKEKKDIKVVVAKGVN-RGVKGRPKGVKGRYAMVDSRMKKEMR 862
>gi|403223589|dbj|BAM41719.1| FtsJ cell division protein [Theileria orientalis strain Shintoku]
Length = 813
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 282/849 (33%), Positives = 447/849 (52%), Gaps = 114/849 (13%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
K GK+RLDKYY LAKEHGYRSR+++K++QL KF+ ++ + ++DLCAAPGGW+QVA
Sbjct: 4 NKKTGKNRLDKYYHLAKEHGYRSRSAFKIIQLSKKFNIFQNCNTLVDLCAAPGGWLQVAS 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ +PV S ++G+DLVPI PI+G ++ + DI P+CR+ + ++ V D+VLHDGSP
Sbjct: 64 KHLPVSSTIIGVDLVPIKPIKGVITFQSDIRTPKCRSLIVSQLKGGEV---DVVLHDGSP 120
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
N+G W +A +QN LV+ + KLA+ L G FVTK+FRS DY+S+++ L FE+++V
Sbjct: 121 NMGSNWNLDAFNQNVLVLSAAKLASTILKKGGIFVTKIFRSSDYNSLIWMLGNCFERIKV 180
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPR------KVVDVLRGTK 235
KP +SR+ SAEI+ + I +K+ +DPRL +V Y+F + + K ++ L +
Sbjct: 181 TKPQSSRNVSAEIFAICIGFKSLKGLDPRLFNVDYVFHSDRDSKTPEITNKSLNQLFKEQ 240
Query: 236 QKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDP-----------ACSA 284
+KR+R+GY D ++ +F+ SN P +L S ITF P
Sbjct: 241 KKRNREGY---DESIYSEITVLEFMRSNTPANLLFSNNKITFSAPKHTDSREDDQKLVKQ 297
Query: 285 IKDHELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAF-----SSAEKATVPASASAP 339
I++ LTTEEVK LC DL+V GK D + LLKWR ++ KA S AEK+ V A
Sbjct: 298 IEEDPLTTEEVKLLCSDLKVAGKSDLQSLLKWRFKLLKALPIVDKSKAEKSEVEPKNIAE 357
Query: 340 TEGENEEDADNRVLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYT 399
N E+ D ++ + +K + + +++E+KLL KR + +++AT
Sbjct: 358 DAELNIEEEDKKI---KDRIKLELRKAQRKERKLL--KRTRKGSKEATSYL-------EP 405
Query: 400 DHELFSLSSIKGKKDLAAVEYDDDDVNAAAEDSEDERP--NRDTQEHVSSDIDSDEERRK 457
D ELF+L S++G + EY D+ + E ED P + D + +D D E R
Sbjct: 406 DPELFNLESLQGNEIDDEYEYSSTDMESELE-LEDYEPEESLDPETERLMKMDVDLEVRH 464
Query: 458 YDEQLEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDE--------------- 502
+++ E ++ + KR + M++ + K + + Q E
Sbjct: 465 TIDKINET-EKPKNTKMTKRQKANMEKSQEMKQFIDKLQYEAKLEAAKDSEEELESESES 523
Query: 503 ---DEDTMHTSYDSDKDQGDLDANPLMVPLDD-GIRPTQEE----ITNKWFSQEIFAEAV 554
+ +H+ DSD ++ V D +R +EE I+++WF QEIF
Sbjct: 524 ESDPDSEVHSVADSDAEEDS------EVKKDTAAMREEEEEDNDLISSRWFDQEIFN--- 574
Query: 555 QNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPA- 613
Q+ + K+ E + + D++AE + + E F++VPA
Sbjct: 575 QDPEKEKIKVEKKKKRDRRAESN-------------------------KEEESFQVVPAI 609
Query: 614 PGADSSDDSSSDESED--EEVDTKAEILACAKKMLRKKQREQILDDAYNRYMFDDDGLPD 671
+D + +DE +D + D A++ A M+ KK R +++D AYN+ F D+ LP
Sbjct: 610 SNSDVQALAKTDEFKDLASDPDAVAQVQALGSLMINKKTRMELIDGAYNKKTFMDENLPS 669
Query: 672 WFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKK 731
WF+++E +H + PVTKE + KA+ E+ RP KKV EAK RK A ++ + + K
Sbjct: 670 WFVDDENKHNKRQYPVTKELMKKYKAKLLELKNRPIKKVLEAKHRKALRAQKRYKSILPK 729
Query: 732 ANVISDQADISDRSKRKQIEQLYKSAVPKRPKKEYVVAKKGVQVRAGKG------KVL-- 783
IS+ + S + +K + L K KR +K YVV++K + K K+
Sbjct: 730 IEAISNDEN-SGGNAKKLLRGLKKIRSNKR-EKVYVVSRKTGSAKTSKATSSGSRKMFKH 787
Query: 784 VDPRMKKDS 792
VD RMK+D+
Sbjct: 788 VDRRMKQDN 796
>gi|410078444|ref|XP_003956803.1| hypothetical protein KAFR_0D00220 [Kazachstania africana CBS 2517]
gi|372463388|emb|CCF57668.1| hypothetical protein KAFR_0D00220 [Kazachstania africana CBS 2517]
Length = 841
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 285/856 (33%), Positives = 448/856 (52%), Gaps = 90/856 (10%)
Query: 1 MGKVKGKH---RLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGW 56
MGK + K+ RLDKYY LAKE GYR+R+S+K++Q++ KF FL S V+DLCAAPG W
Sbjct: 1 MGKTQKKNSKGRLDKYYFLAKEKGYRARSSFKIIQINEKFGHFLEKSKVVIDLCAAPGSW 60
Query: 57 MQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
QVA + PV SL++G+D+VP+ P+ ++ + DIT +CR++++ M+ D VL
Sbjct: 61 CQVASKLCPVNSLIIGVDIVPMKPMPNVITFQSDITTEDCRSKLRGYMKTWKA---DTVL 117
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
HDG+PNVG W Q+A +Q+ L + ++KLA + L GTF+TK+FRS+DY+ +++ +QLF
Sbjct: 118 HDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLVVNGTFITKIFRSKDYNKLIWVFQQLF 177
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVE-PRKVVDVLRGTK 235
E+VE KP ASR+ SAEI+++ +KAP K+DPRLLD K +F+ + P+ + + +
Sbjct: 178 ERVEATKPPASRNVSAEIFVVCKGFKAPKKLDPRLLDPKEVFEELPDGPQNMESKIYNPE 237
Query: 236 QK-RHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF--GDPACSAIKDHELTT 292
+K R R GY++GD L + +FI + +P+ +LGS+ T D IK T
Sbjct: 238 KKVRKRGGYDEGDNLLYHETPIMEFIKTEDPITMLGSMNKFTMDKDDHEWKIIKKLRQTN 297
Query: 293 EEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRV 352
+E+ + +DL+VLGK+DFK LL+WR + ++ P P EE+ +
Sbjct: 298 DELLSCVEDLKVLGKKDFKMLLRWRKNARDLLGLDKEEEKPEIKVTPL---TEEEQIEKE 354
Query: 353 LNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSIKGK 412
L +++ + ++ +R+KR K + K ++ T MQ++++ E SL GK
Sbjct: 355 LQSLQDKQRSLKKREKRRKNEM-------KQKEITRMQLNMLTPTDIGIEAASL----GK 403
Query: 413 KDLAAVEYDDDD--VNAAAEDSE-----DERPNRDTQEHV-SSDIDSDEERRKYDEQLEE 464
+ L ++ ++ +N A + +E +D H+ +++ D R+ + LE
Sbjct: 404 ESLFNLKTAENTGILNDLARGKKRMIFSEEELAKDNDIHIDEAELIRDRNSREDVDDLEA 463
Query: 465 VLDQAYENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDED----TMHTSYDSDKDQGDL 520
L+ Y +Y + RK + A + Q GD DE+ T + D ++D
Sbjct: 464 QLNAMYSDYKS--------RKSERDAKFKAKQARGGDGDEEWTGFTDNKKEDEEEDAQSS 515
Query: 521 D-ANPLMVPLDDGIRPTQEEITN-------------------KWFSQEIFAEAVQNGDLG 560
D N D E I N F+ IF E V+ DL
Sbjct: 516 DYINDDDTDSDLSESDDDEAINNLISKLKGSSGDHKLSSRARMLFNDPIF-ENVK-ADLK 573
Query: 561 KLGSEDETQVDKQAEKHSIPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSD 620
+ + + + I K K A D S + + E DFEIVP D
Sbjct: 574 STATAEPVSSESVGDISKITRKRTHKAAEDEEIISSAESSTDDSESDFEIVPNENGTQDD 633
Query: 621 DSSSDESEDEEVDTK------------AEILACAKKM-LRKKQREQILDDAYNRYMFDD- 666
S +SE+E T E + A K+ L K + ++D+ +NRY F D
Sbjct: 634 FDSDYDSEEERKQTSKEKHAKELDIATVEAMTLAHKLALGKATKHDLMDEGFNRYSFRDV 693
Query: 667 DGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLE 726
+ LPDWF+E+E++H + RP+TKE A+K + K ++ARP KKVAEAKARKK A+ +LE
Sbjct: 694 ENLPDWFIEDEKQHSKINRPITKEAAMAIKEKMKALNARPIKKVAEAKARKKMRAVARLE 753
Query: 727 KVRKKANVISDQADISDRSKRKQIEQLYKSAVPK---RPKKEYVVAKKGVQVRAG----- 778
K++KKA +I+D D S+R K ++I +L + K +P+ V A + +G
Sbjct: 754 KIKKKAGLINDDNDKSERDKAEEIAKLMRKVTKKQRTKPRVTLVYATGKNKALSGRPNGV 813
Query: 779 KGKV-LVDPRMKKDSR 793
KG+ +VD MK + R
Sbjct: 814 KGRYKMVDGVMKNEQR 829
>gi|340904909|gb|EGS17277.1| hypothetical protein CTHT_0065960 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 834
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 300/840 (35%), Positives = 472/840 (56%), Gaps = 76/840 (9%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K+ FL + VLDLCAAPG W QV + +P
Sbjct: 9 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKAKVVLDLCAAPGSWCQVCAETMP 68
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
SL++G+DL PI PI ++ + DIT +CRA ++ ++ D+VLHDG+PNVG
Sbjct: 69 KDSLIIGVDLAPIKPIPKVITFQSDITTEKCRATIRSHLKTWKA---DVVLHDGAPNVGT 125
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q++ +Q L + S+KLAT+FL GTFVTKVFRS+DY+ +L+ QLF KVE KP
Sbjct: 126 AWVQDSYNQAELALHSLKLATEFLIEGGTFVTKVFRSKDYNKLLWVCNQLFTKVEATKPP 185
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVE--PRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ +KAP +IDPRLLD + +F+ + P V ++KR R+GY
Sbjct: 186 SSRNVSAEIFVVCRGFKAPKRIDPRLLDPRSIFEDLADPAPNNEARVYNPEQKKRKREGY 245
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD T K + A +FI + +P+ IL + ++F GD A +A++ TT+E++A
Sbjct: 246 EEGDYTQYKETSAIEFINTTDPIAILANYNKLSFEQPPNGDVALAALEKLPETTKEIRAC 305
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEE-DADNRVLNEME 357
CDDL+VLGK+DF+ LLKWR+++++ F K T E + E D + ++ E+E
Sbjct: 306 CDDLKVLGKKDFRLLLKWRLRVREIFGLPSKKTAKQQPLVEEEAKVEPMDEELKIQEELE 365
Query: 358 ELKYAMDQRKKREKKLLAKKRAKDKAR----KATGMQIDVMQDD-YTDHELFSLSSIKGK 412
+K +KKRE++ +++ K+ R T M I + Q+ D F L I
Sbjct: 366 RIKEKERAKKKRERRKENERKHKEIVRMQMHMTTPMDIGMEQEGPRGDGAFFRLKEIDQT 425
Query: 413 KDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYEN 472
L + A +E E+ +RD+ +S D+D++ + +QLE LD YE+
Sbjct: 426 DALRRIAK-----GKMAMLTEAEQADRDSGIGLSP--DTDDDSDEDGDQLERELDAMYEH 478
Query: 473 YVAKRGGSTMQRKRAKKAYAQ-EDQLSEG---DE---------------DEDTMHTSYDS 513
Y +R S + RAK+A + +D+ EG DE +ED+ S
Sbjct: 479 Y-KERKASQDAKYRAKRARQEVDDEEWEGLSADEKGSDVDMDDDDSERLEEDSSDEEAWS 537
Query: 514 DKDQGDLDANPLMVPLD----DGIRPTQEEITNKWFSQEIFAEAVQNGDLGKLGSEDETQ 569
D ++ D + PL+ L DG ++ +FSQ++F + G L + E++
Sbjct: 538 DDEELDT-SKPLIKDLSGAPQDGSGLSKR--ARGFFSQDVFQKIP-----GLLDTVSESE 589
Query: 570 VDKQAEKH-SIPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESE 628
++ ++ + IP +QK K Q + DFE+V DS DD E +
Sbjct: 590 EEQDSDDNDGIPSIQEQKRMQKEKKEKEAKKQDDD---DFEVVKE--HDSDDDWEEKEKK 644
Query: 629 DEE----VD-TKAEILACAKKMLR-KKQREQILDDAYNRYMF-DDDGLPDWFLEEERRHR 681
++ +D AE + A ++ +K + ++D+ YN+Y F +GLPDWFLE+E +H
Sbjct: 645 SKDGRPNIDIITAEAMTLAHQLATGEKTKADLIDEGYNKYAFKQKEGLPDWFLEDEAKHD 704
Query: 682 QAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADI 741
+ I+P+TKE A+K + + ++ARP KKVAEA+AR+K +KLEK++KKA+++ D+ +
Sbjct: 705 KPIKPITKEAAQAIKEKLRALNARPIKKVAEARARRKLRQAKKLEKLKKKADLLVDEEGM 764
Query: 742 SDRSKRKQIEQLYKSAVPKRPKKEYVVAKKGVQVRAGKGKV--------LVDPRMKKDSR 793
S++ K I ++ +A K+ + + V K R KG+ +VD RMKK+ R
Sbjct: 765 SEKEKATTIAKMLSAAARKKRRPQVKVVKATGANRGIKGRPKGVKGRYKMVDGRMKKEMR 824
>gi|170042491|ref|XP_001848957.1| AdoMet-dependent rRNA methyltransferase spb1 [Culex
quinquefasciatus]
gi|167866033|gb|EDS29416.1| AdoMet-dependent rRNA methyltransferase spb1 [Culex
quinquefasciatus]
Length = 857
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 300/851 (35%), Positives = 468/851 (54%), Gaps = 105/851 (12%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
GKV GK R DK+Y+LAKE GYRSRA++KL+QL+ KF FL+ S +DLCAAPGGWMQVA
Sbjct: 5 GKV-GKDRKDKFYKLAKETGYRSRAAFKLIQLNRKFGFLQQSQVCIDLCAAPGGWMQVAK 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
Q +PV S+V+G+DL I + G +SL DIT + ++ + K ++ D+VL+DG+P
Sbjct: 64 QNMPVSSIVIGVDLYAIKNVPGCISLVGDITSDKTKSDLTKELKTWKA---DVVLNDGAP 120
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG W +A Q L + + KLATQFL P G F+TKVFRS+DY+++++ LKQLF+KV
Sbjct: 121 NVGRNWLFDAYQQVCLTLSATKLATQFLRPGGWFITKVFRSKDYNALIWVLKQLFKKVHA 180
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQG-SVEPRKVVDVLRGTKQ--KR 238
KP+ASR+ SAEI+++ Y+AP KIDPR LD KY+F+ +EP+ +++L+ ++ K
Sbjct: 181 TKPSASRNESAEIFVVCQHYRAPDKIDPRFLDAKYVFEELDIEPQVKINLLKDVEKTKKA 240
Query: 239 HRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKAL 298
+GYE D +RK+ T+F+ + PL +LG +T I F DPA I+ H TT E++
Sbjct: 241 KVEGYEGTD--VRKIISVTEFLRDDKPLALLGRLTEIRFDDPA---IEKHPRTTAEIREC 295
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAF--------SSAEKATVPASASAPTEGE--NEEDA 348
C D++VLG++D + LLKW + + ++ +GE +EE
Sbjct: 296 CKDIKVLGRKDLRDLLKWHKLLNGELFPKVEGEEEEGKGKSLAQRVQQEQDGESADEETV 355
Query: 349 DNRVLN-EMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQI--DVMQDDYTDHELFS 405
+ R + E+ LK +Q KR++K K+R K + + M I D + D +FS
Sbjct: 356 ELRNMEKEIAALKKEEEQDAKRKRKKANKERTKLNEKLSLKMVIKGDAGPTEQEDGMIFS 415
Query: 406 LSSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEV 465
L+++K +K++ + DV A +D+ P++ Q++V D ++ + + D+Q+
Sbjct: 416 LNTLKSRKEVDVLLDAPPDVLAEPGFDDDDGPHK-KQKYVKYDRETKGDLFE-DDQILAK 473
Query: 466 LDQAYENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDA-NP 524
DQ ++ + A+ +L D+D+D DSD D DA NP
Sbjct: 474 TDQDPDS----------------DSEAEMPKLEFEDDDDDQQPDEVDSD----DPDAKNP 513
Query: 525 LMVPLD----DGIRPTQEEITNKWFSQEIF------AEAVQNGDLGKL-------GSEDE 567
L+ LD D R + ++ WF F A+A + DL + G +
Sbjct: 514 LITDLDYRDKDVKRVQKAQL---WFENPSFKGVMDTADATVDYDLDNMTEMYRKAGVKII 570
Query: 568 TQVDKQAEKHSIPEKAKQKMANDAAGPKST--------------HNQVSEVEGD--FEIV 611
+ DK + S+ KA+++ +D A + H + +V G FE+V
Sbjct: 571 GREDKPIGEQSLGRKAQRRSRHDTAKESDSSDDSDSDADDDTVEHKTIEKVGGKDGFEVV 630
Query: 612 PAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLR-KKQREQILDDAYNRYMFDDDGLP 670
S E + ++V E LA + ++ KK + ++D A+NRYMF+D LP
Sbjct: 631 ------------SSEPKPKKVKLNEEELALGQILVSGKKAKRDLIDAAWNRYMFNDANLP 678
Query: 671 DWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRK 730
+WF+++E + + PV E +A+ + ++I+ R KKV EAKARKKR A ++L+K++K
Sbjct: 679 EWFVKDEEKTMKREAPVPHETVASYRNNLEDINVRSLKKVMEAKARKKRHAAKRLDKIKK 738
Query: 731 KANVISDQADISDRSKRKQIEQLYKSAVPKRPKKEYVVAKK----GVQVRAGKGK----V 782
KA I + D +++ K + +++LYK K+ + YVVAKK G +VR KG
Sbjct: 739 KAETIMENVDNTNQEKIRMLKKLYKKTDAKKKEITYVVAKKSGTSGKKVRRPKGVEGRFK 798
Query: 783 LVDPRMKKDSR 793
+VDPRMKKD R
Sbjct: 799 VVDPRMKKDRR 809
>gi|197097760|ref|NP_001125667.1| pre-rRNA processing protein FTSJ3 [Pongo abelii]
gi|73621845|sp|Q5RAS1.1|RRMJ3_PONAB RecName: Full=pre-rRNA processing protein FTSJ3; AltName:
Full=Protein ftsJ homolog 3; AltName: Full=Putative rRNA
methyltransferase 3; AltName: Full=rRNA
(uridine-2'-O-)-methyltransferase 3
gi|55728800|emb|CAH91139.1| hypothetical protein [Pongo abelii]
Length = 841
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 291/877 (33%), Positives = 457/877 (52%), Gaps = 139/877 (15%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
GKV GK R DK+Y LAKE GYRSR+++KL+QL+ +F FL+ + A+LDLCAAPGGW+QVA
Sbjct: 5 GKV-GKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAA 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ +PV SL++G+DLVPI P+ V+L++DIT CR ++K ++ V D+VL+DG+P
Sbjct: 64 KFMPVSSLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWKV---DVVLNDGAP 120
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG +W +A SQ L + +++LA FLA G+F+TKVFRS+DY +L+ +QLF +V+
Sbjct: 121 NVGASWVHDAYSQAHLTLMALRLACDFLARGGSFITKVFRSRDYQPLLWIFQQLFRRVQA 180
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHR 240
KP ASR SAEI+++ + AP K+D + D K+ F + V+ + V +++ TK+K
Sbjct: 181 TKPQASRHESAEIFVVCQGFLAPDKVDSKFFDPKFAFKEVEVQAKTVTELV--TKKKPKA 238
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
+GY +GD TL + TDF+ + NP++ L + I D + H TTE+++ C
Sbjct: 239 EGYAEGDLTLYHRTSVTDFLRAANPVDFLSKASEIMVDD---EELAQHPATTEDIRVCCQ 295
Query: 301 DLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPA-------------SASAPTEGENEED 347
D+RVLG+++ + LL WR ++++ + K A + T G E+
Sbjct: 296 DIRVLGRKELRSLLNWRTKLRRYVAKKLKEQAKALDISLSSGEEDEGNEEDSTAGTTEQP 355
Query: 348 AD--------NRVLNEMEELKYA----------MDQRKKREKKLLAKKRAKDKARKATGM 389
+ N+ L EM+ + A +QRK+RE+ L G+
Sbjct: 356 SKEEEEEEQLNQTLAEMKAQEVAELKRKKKKLLREQRKQRERVELKM--------DLPGV 407
Query: 390 QIDVMQDDYTDHELFSLSSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDI 449
I D + +FSL +I+G++ L V D +AA+ + P D SD+
Sbjct: 408 SI----ADEGETGMFSLRTIRGQQLLEEVTQGD---MSAADTFLSDLPRDDI---YVSDV 457
Query: 450 DSDEERRKYDEQLEEVLDQAYENYVAKRGGSTMQ-RKRAKKAYAQEDQLSEGDEDEDTMH 508
+ D + D E RG ++ +KR + Q+
Sbjct: 458 EDD------GDDTSLDSDLDPEELAGVRGHQGLRDQKRVRLTEVQD-------------- 497
Query: 509 TSYDSDKDQGDLDANPLMVPLDDGIRPTQEEITNKWFSQEIFAEAVQNGD------LGKL 562
DK++ + + NPL+VPL++ QEE N WFS+ FA + D +L
Sbjct: 498 -----DKEEEEEEENPLLVPLEEKA-VLQEEQANLWFSKGSFAGIEDDADEALEISQAQL 551
Query: 563 GSEDETQVDKQAEKHSIPEKAKQKMANDA---AGPKSTH-----NQVSEVEGD------- 607
E + + +Q ++P K ++ + PK T + ++G+
Sbjct: 552 LFESQRKGRQQQLPQTLPSCLKTEIMSPLYQDEAPKGTEASSGTEAATGLKGEEKDGISD 611
Query: 608 ------------FEIVPAP----GADSSDDSS-----SDESEDEEVDTKAEILACAKKML 646
+E V G S DD D ++ +D + L
Sbjct: 612 SDSSSSSEEEESWEPVRGKKRSRGPKSDDDGFEIVPIEDPAKHRILDPEGLALGAVIASS 671
Query: 647 RKKQREQILDDAYNRYMFDDD--GLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDA 704
+K +R+ ++D+++NRY F++D LP+WF++EE++HR P+ K+E+ + +++EI+A
Sbjct: 672 KKAKRD-LIDNSFNRYTFNEDEGELPEWFVQEEKQHRIRQLPIGKKEMEHYRKRWREINA 730
Query: 705 RPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKK 764
RP KKVAEAKARKKR +++LE+ RKKA + + DIS+R K Q+ LYK A + K+
Sbjct: 731 RPIKKVAEAKARKKRRMLKRLEQTRKKAEAVVNTVDISEREKVAQLRSLYKKAGLGKEKR 790
Query: 765 E--YVVAKKGV--QVRAGKGKV----LVDPRMKKDSR 793
YVVAKKGV +VR G +VD RMKKD R
Sbjct: 791 HVTYVVAKKGVGRKVRRPAGVRGHFKVVDSRMKKDQR 827
>gi|310792520|gb|EFQ28047.1| Spb1 domain-containing protein [Glomerella graminicola M1.001]
Length = 852
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 296/847 (34%), Positives = 466/847 (55%), Gaps = 67/847 (7%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K+ FL S V+DLCAAPG W QVA + P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVVVDLCAAPGSWCQVAAETCP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
VG+L++G+DL PI PI ++ + DIT +CRA ++ ++ D VLHDG+PNVG
Sbjct: 68 VGALIVGVDLAPIKPIPKVITFQSDITTDKCRATIRSHLKTWKA---DCVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q++ +Q LV+ S+KLAT+FL GTFVTKVFRS+DY+ +L+ QLF KVE KP
Sbjct: 125 AWNQDSFNQAELVLQSMKLATEFLVEGGTFVTKVFRSKDYNPLLWVFNQLFTKVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ YKAP +IDPR LD + +F P V +KR R+GY
Sbjct: 185 SSRNVSAEIFVVCKGYKAPKRIDPRFLDPRAVFAELKDPTPNNEAKVYNPEVKKRKREGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD T KV A++FI S +P+ ILG ++F GD A +A+ TT++++
Sbjct: 245 EEGDYTQFKVVSASEFIHSVDPIAILGQTNQLSFDQPPNGDVALAALDKLPETTDDIRRN 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTE-GEN-----EEDADNRV 352
C DL+VLG+++FK LLKWR+++++ F K T S + GE D + R+
Sbjct: 305 CADLKVLGRKEFKQLLKWRLKVREIFGFPTKKTTQQKKSLQDQVGEEVAEVESMDEELRI 364
Query: 353 LNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGM--QIDVMQDD---YTDHELFSLS 407
E+E LK D +KK+E++ +K+ KD R M +D+ + +F+L
Sbjct: 365 QQELEALKNKEDSKKKKERRKENEKKQKDIVRMQLNMVAPMDIGMEQAGPLGPDAMFALK 424
Query: 408 SIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLD 467
+ + + + +E +E V SD DSD E + + +L+ + D
Sbjct: 425 TADKAGGINKIARGKMVLIKESEKKAEE------AGIVYSDSDSDAEEDRLERELDGMYD 478
Query: 468 QAYENYVAKRGGSTMQRKRAKKAYAQEDQLSEG---DEDEDT---MHTSYDSDKDQGDLD 521
Q E A +R R + + + +S G D DED +S D + D+ + +
Sbjct: 479 QFRERKAAADAKWRAKRAREEHEDGEWEGVSGGEQSDSDEDMEMDSDSSNDDNDDEEEDN 538
Query: 522 ANPLMVPLDDGIRPTQ-EEITNKWFSQEIFAEAVQNGDLG--KLGSEDETQVDKQAEKH- 577
PL+ LD+ + +FSQ+IF + + GD+ G +D+ Q ++ + K
Sbjct: 539 GRPLVTDLDNTAENGNLSKRATAFFSQDIFKD-IDIGDVDDEAWGVDDKPQGEEPSRKKA 597
Query: 578 -SIPEKAKQKMANDAAGPKSTHNQVSE-----VEGDFEIVPAPGADSSDDSSSDESEDEE 631
++ E +K+ +D K + E V F+ G D+ + ++ ED E
Sbjct: 598 KTVKETEAKKVKDDKTKAKEDKKKAKEESKKKVADGFDSESESGDDAGFEVVKNQEEDWE 657
Query: 632 VDTK-------------AEILACAKKMLR-KKQREQILDDAYNRYMFDD-DGLPDWFLEE 676
K AE + A ++ +K + ++D+ +N+Y D DGLPDWF+++
Sbjct: 658 NQEKRRPDGRLDIDIITAEAMTLAHQLATGEKTKHDLVDEGFNKYALKDRDGLPDWFIDD 717
Query: 677 ERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVIS 736
E +H + +P+TK AA++ + + +ARP KKV EAKARKK A ++LEK++KK+++++
Sbjct: 718 ETKHDKPQKPITKAAAAAIREKLRAYNARPIKKVREAKARKKFKAAQRLEKLKKKSDMLA 777
Query: 737 DQADISDRSKRKQIEQLYKSA--VPKRPKKEYVVAK---KGVQVR--AGKGK-VLVDPRM 788
++ ++++ K I ++ A V +RPK VVA+ +G+Q R KG+ +VD RM
Sbjct: 778 NEESMTEKEKADSIAKMMAKAGKVKRRPKPTLVVARGSNRGIQGRPKGVKGRYTIVDSRM 837
Query: 789 KKDSRTH 795
KKD R
Sbjct: 838 KKDLRAQ 844
>gi|440890861|gb|ELR44944.1| Putative rRNA methyltransferase 3 [Bos grunniens mutus]
Length = 833
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 290/878 (33%), Positives = 445/878 (50%), Gaps = 156/878 (17%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R DK+Y LAKE GYRSR+++KL+QL+ +F FL+ + A+LDLCAAPGGW+QVA + +P
Sbjct: 8 GKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V SL++G+DLVPI P+ V+L++DIT CR ++K ++ V D+VL+DG+PNVG
Sbjct: 68 VSSLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWKV---DVVLNDGAPNVGA 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
+WA +A SQ L + +++LA FL G F+TKVFRS+DY +L+ +QLF +V+ KP
Sbjct: 125 SWAHDAYSQAHLTLMALRLACDFLGRGGCFITKVFRSRDYQPLLWIFQQLFRRVQATKPQ 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHRDGYE 244
ASR SAEI+++ + AP K+D + D K+ F + V+ + V +++ TK+K +GY
Sbjct: 185 ASRHESAEIFVVCQGFLAPDKVDSKFFDPKFAFKEVEVQAKTVTELV--TKKKPKAEGYA 242
Query: 245 DGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLRV 304
+GD TL + TDF+ + NP++ L + I+ D + H TTE+++ C D++V
Sbjct: 243 EGDLTLYHRTSITDFLRAANPVDFLSKASEISLDD---EELAQHPATTEDIRVCCQDIKV 299
Query: 305 LGKQDFKHLLKWRMQIKKAFSSAEKATVPA---------------------SASAPTEGE 343
LG+++ + LL WR ++++ + K A + P++ E
Sbjct: 300 LGRKELRSLLNWRTKLRRYVAKKLKEQAKALDISLSSGEEEEGEEEEAAARTGPQPSQEE 359
Query: 344 NEEDADNRVLNEMEELKYA----------MDQRKKREKKLLAKKRAKDKARKATGMQIDV 393
EE+ NR L EM+ + A +QRK+RE+ L G+ I
Sbjct: 360 EEEEQLNRTLAEMKAQEVAELKRKKKKLLREQRKQRERVELKM--------DLPGVSI-- 409
Query: 394 MQDDYTDHELFSLSSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDE 453
D + +FSL +I+G + L V D +AA+ + P D +VS D D+
Sbjct: 410 --ADEGETGMFSLRTIRGHQLLEEVTQGD---MSAADAFLSDLPRDDI--YVSDGEDDDD 462
Query: 454 ERRKYDEQLEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDS 513
D EE+ + E +D +
Sbjct: 463 ASLGSDLDPEELAG-----------------------------VKEPQSLKDRKCVRFAE 493
Query: 514 DKDQGDLDANPLMVPLDDGIRPTQEEITNKWFSQEIFAEAVQNGDLG------------- 560
+D + + NPL+VPL++ QEE + WFS++ F+ + D
Sbjct: 494 AEDDKEEEENPLLVPLEEKA-VLQEEQASLWFSKDGFSGIEDDADEALEISQAQLLFESR 552
Query: 561 -------KLGSEDETQVDKQAEKHSIP-EKAKQKMANDAAGP------------------ 594
L S +ET+ + P E K + A GP
Sbjct: 553 RKGQQPPPLPSNEETKSKPPPCQGEAPKEVGAPKGSEVAPGPGEEERDGSSDSDSSSEDE 612
Query: 595 ---------KSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKM 645
K SE + FE+VP +D D E ++A +KK
Sbjct: 613 ESWKSQRGKKRGRGPKSEDDDGFEVVPI------EDPVKHRILDPEGLALGALIASSKKA 666
Query: 646 LRKKQREQILDDAYNRYMFDDD--GLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEID 703
R ++DD+++RY F++D LPDWF++EE++HR PV K+E+ + +++EI+
Sbjct: 667 KR-----DLIDDSFSRYTFNEDEGELPDWFVQEEKQHRIRQLPVDKKEVEHYRKRWREIN 721
Query: 704 ARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPK 763
ARP KKVAEAKARKKR ++KLE+ +KKA + + DIS+R K Q+ LY+ A + K
Sbjct: 722 ARPIKKVAEAKARKKRRMLKKLEQTKKKAEAVVNTVDISEREKVAQLRSLYRKAGLGKEK 781
Query: 764 KE--YVVAKKGV--QVRAGKGKV----LVDPRMKKDSR 793
++ YVVAKKGV +VR G +VD RMKKD R
Sbjct: 782 RQVTYVVAKKGVGRKVRRPAGVRGHFKVVDSRMKKDQR 819
>gi|149723383|ref|XP_001501025.1| PREDICTED: putative rRNA methyltransferase 3-like [Equus caballus]
Length = 837
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 288/873 (32%), Positives = 450/873 (51%), Gaps = 137/873 (15%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
GKV GK R DK+Y LAKE GYRSR+++KL+QL+ +F FL+ + A+LDLCAAPGGW+QVA
Sbjct: 5 GKV-GKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAA 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ +PV SL++G+DLVPI P+ V+L++DIT CR ++K ++ V D+VL+DG+P
Sbjct: 64 KFMPVSSLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWKV---DVVLNDGAP 120
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG +W +A SQ L + +++LA FLA G F+TKVFRS+DY +L+ +QLF +V+
Sbjct: 121 NVGASWVHDAYSQAHLTLMALRLACDFLARGGCFITKVFRSRDYQPLLWIFQQLFRRVQA 180
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHR 240
KP ASR SAEI+++ + AP K+D + D K+ F + V+ + V +++ TK+K
Sbjct: 181 TKPQASRHESAEIFVVCQGFLAPDKVDSKFFDPKFAFKEVEVQTKTVTELV--TKKKPKA 238
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
+GY +GD TL + TDF+ + NP++ L + I+ D + H TTE+++ C
Sbjct: 239 EGYAEGDLTLYHRTSVTDFLRAANPVDFLSKASEISLDD---EELAQHPATTEDIRVCCQ 295
Query: 301 DLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPA----------------------SASA 338
D++VLG+++ + LL WR ++++ + K A +
Sbjct: 296 DIKVLGRKELRSLLNWRTKLRRYVAKKLKEQAKALDISLSSGEEEEEGNEEESTARTVRQ 355
Query: 339 PTEGENEEDADNRVLNEMEELKYA----------MDQRKKREKKLLAKKRAKDKARKATG 388
P++ E EE+ NR L EM+ + A +QRK+RE+ L G
Sbjct: 356 PSKEEEEEEQLNRTLAEMKAQEVAELKRKKKKLLREQRKQRERVELKM--------DLPG 407
Query: 389 MQIDVMQDDYTDHELFSLSSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSD 448
+ I D + +FSL +I+G + L V D +AA+ + P D SD
Sbjct: 408 VSI----ADEGETGMFSLRTIRGHQLLEKVTAGD---MSAADTFLTDLPRDDI---YVSD 457
Query: 449 IDSDEERRKYDEQLEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMH 508
++ D D EE+ G QR R +K
Sbjct: 458 VEDDSASLDSDLDPEELA-----------GVGRPQRLRDQKR---------------VQF 491
Query: 509 TSYDSDKDQGDLDANPLMVPLDDGIRPTQEEITNKWFSQEIFAEAVQNGDLGKLGSEDET 568
+ D+ + + + NPL+VPL++ QEE N WFS++ F+ + D S+ +
Sbjct: 492 AKVEDDEKEEEEEENPLLVPLEEKA-VLQEEQANLWFSKDGFSGIEDDADEALEISQAQL 550
Query: 569 QVDKQAEKHSIPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDD------- 621
+ + K P + K + + +E E PG + D
Sbjct: 551 LYESR-RKGQPPSPSSLKTERKPPQCRDEAAKGAEAPSGTEAATGPGEEKRDGSSDSDSS 609
Query: 622 ----------------SSSDESEDEE---------------VDTKAEILACAKKMLRKKQ 650
S ES+D++ +D + L +K +
Sbjct: 610 SSEDEESWKPHRSKKRSRRPESQDDDGFEIVPIEDPVKHRILDPEGLALGAIIASSKKAK 669
Query: 651 REQILDDAYNRYMFDDD--GLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAK 708
R+ ++D+++NRY F++D LP+WF++EE++HR P+ K+E+ + +++EI+ARP K
Sbjct: 670 RD-LIDNSFNRYAFNEDEGELPEWFVQEEKQHRIRQLPIDKKEVERYRKRWREINARPIK 728
Query: 709 KVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKE--Y 766
KVAEAKARKKR ++KLE+ +KKA + + DIS+R K Q+ LYK A + K++ Y
Sbjct: 729 KVAEAKARKKRRMLKKLEQTKKKAEAVVNTVDISEREKVAQLRSLYKKAGLGKEKRQVTY 788
Query: 767 VVAKKGV--QVRAGKGKV----LVDPRMKKDSR 793
VVAKKGV +VR G +VD RMKKD R
Sbjct: 789 VVAKKGVGRKVRRPAGVRGHFKVVDSRMKKDQR 821
>gi|302843764|ref|XP_002953423.1| hypothetical protein VOLCADRAFT_63770 [Volvox carteri f.
nagariensis]
gi|300261182|gb|EFJ45396.1| hypothetical protein VOLCADRAFT_63770 [Volvox carteri f.
nagariensis]
Length = 440
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/386 (52%), Positives = 271/386 (70%), Gaps = 26/386 (6%)
Query: 5 KGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV 64
KGK+RLDKYY LAKE GYRSRA++KL+QL+ K++FL A+LDLCAAPGGW+QVA + +
Sbjct: 7 KGKNRLDKYYHLAKEQGYRSRAAFKLIQLNRKYNFLGKCRALLDLCAAPGGWLQVAAKTM 66
Query: 65 PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVG 124
PVGSL+LG+DL PI PIRG +L QDIT +CR+ +K+ E G D+VLHDG+PNVG
Sbjct: 67 PVGSLILGVDLAPIKPIRGVKTLVQDITTQQCRSAIKR---EAGNAKMDVVLHDGAPNVG 123
Query: 125 GAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKP 184
GAWA EA +Q+ LV+DS+KLA LAPKGTFVTK+FRS+DY+++LY QLFEKVE KP
Sbjct: 124 GAWASEAYNQSTLVLDSLKLAVDTLAPKGTFVTKIFRSKDYNALLYAFNQLFEKVEATKP 183
Query: 185 AASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVD---VLR-GTKQKRHR 240
AASR+ASAEI+++ I +KAPAKIDPRLLD K LFQ EP+KV+ +LR KQ+R R
Sbjct: 184 AASRNASAEIFVVCIGFKAPAKIDPRLLDHKVLFQEVTEPKKVMGPEALLRQKIKQRRFR 243
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
+GYE+G +T + + A F+ S++P+E+LGS F + + I+ H TT E+K+LC
Sbjct: 244 EGYEEGISTSHRFTSALAFLVSDSPVEMLGS-----FTEELAAKIRSHAATTAEIKSLCK 298
Query: 301 DLRVLGKQDFKHLLKWRMQIKKAF-------SSAEKATVPASASA------PTEG-ENEE 346
DL+VLG+ +FK LL+WR+ ++K A KA + +A P +G E +
Sbjct: 299 DLQVLGRSEFKQLLRWRLALRKDLKEDLGTEEEAAKAGHRKAKAADGKQPQPADGAEAPQ 358
Query: 347 DADNRVLNEMEELKYAMDQRKKREKK 372
D + +L +M LK M + KREK+
Sbjct: 359 DPEEALLADMAALKDKMAREAKREKR 384
>gi|410921658|ref|XP_003974300.1| PREDICTED: pre-rRNA processing protein FTSJ3-like [Takifugu
rubripes]
Length = 778
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 283/818 (34%), Positives = 439/818 (53%), Gaps = 108/818 (13%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R DK+Y LAKE GYRSR+S+KL+QL+ KF FL+ + A++DLCAAPGGW+QVA + +P
Sbjct: 8 GKTRRDKFYHLAKETGYRSRSSFKLIQLNRKFQFLQKARALVDLCAAPGGWLQVASKFMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V SL++G+DLVPI PI V+L++DIT +CR ++K ++ V D+VL+DG+PNVG
Sbjct: 68 VSSLIIGVDLVPIKPIPNVVALQEDITTEKCRQALRKELQTWKV---DVVLNDGAPNVGA 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
W +A SQ L + ++KLA +FL GTFVTKVFRS+DY +L+ +Q F KV+ KP
Sbjct: 125 NWQHDAFSQAHLTLMALKLACEFLTKGGTFVTKVFRSKDYQPLLWIFQQFFNKVQSTKPQ 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHRDGYE 244
ASR+ SAEI+++ + AP KID + D K+ F + V+ + V +++ K K +GY
Sbjct: 185 ASRNESAEIFVVCQGFLAPDKIDSKFFDPKHAFKEVEVQAKTVRELIPVKKPK--AEGYT 242
Query: 245 DGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLRV 304
DGD TL T F+ + NP++ L + I F + ++ H TT E+K C D+RV
Sbjct: 243 DGDLTLFHSFPITAFLKAENPVDFLAKASEIIFDN---KDLESHAATTNEIKECCRDIRV 299
Query: 305 LGKQDFKHLLKWRMQIKKAFSSAEKATVPA-----SASAPTEGENEEDADNR-------- 351
LG+++ + LL WR ++++ S K + + S+ E E +E+ + R
Sbjct: 300 LGRKELRQLLSWRSKLRRYLSKKLKMEAKSLQDEINLSSDEEKEPDENKEGREEDDDDDE 359
Query: 352 --VLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQI-DVMQDDYTDHELFSLSS 408
+ ++ +LK KR+KK + K+R K + R A M + V D D +FSLS+
Sbjct: 360 EEMERKLAQLKAEEVAELKRKKKKVLKERRKQRERVALKMDLPGVSIADGGDSSMFSLST 419
Query: 409 IKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQ 468
I +K +A + D D ED+ H+S + D + ++ L+
Sbjct: 420 INKQKLVADISKGDMQAADNLVDEEDDM-------HISEEEDEEADKMSLASDLD----- 467
Query: 469 AYENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDANPLMVP 528
E+ L E + E + + + K++ + + L+V
Sbjct: 468 -------------------------EEDLQEVLQREKEVQFTEEEGKEEDEEPESGLLVE 502
Query: 529 LDDGIRPTQEEITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKMA 588
L+ Q E TN WFS+ IF+ E ++K AE E + K A
Sbjct: 503 LEGKDEKKQRE-TNLWFSKGIFS---------------EIDLEKDAENELQQEITRMKQA 546
Query: 589 NDAAGPKSTHNQVSEV--EGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKML 646
K T+ E + DF++VP S + +D + L C
Sbjct: 547 ------KGTNGMPGEAGDDEDFKVVPV---------ESISKKARILDAEGLALGCQIATS 591
Query: 647 RKKQREQILDDAYNRYMFDDD--GLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDA 704
+K+ R+ ++D +++R+ + +P+WFL++E++HR+ PVT+E + K ++KEI+A
Sbjct: 592 KKRARD-LMDGSFHRFASSEQPWDVPEWFLQDEQKHRRKPVPVTREMVEEYKEKWKEINA 650
Query: 705 RPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKK 764
RP K+VAEAKARKKR ++K+E+ +KKA + + DIS+R K Q++ +YK A + K+
Sbjct: 651 RPIKRVAEAKARKKRRMLKKMEQAKKKAEAVVNTVDISEREKMAQLKSIYKKAGVGKEKR 710
Query: 765 E--YVVAKKGV--QVR-----AGKGKVLVDPRMKKDSR 793
E YVV KKG +VR G KV VD R+KKD R
Sbjct: 711 EVTYVVTKKGAGRKVRRPPGVKGAFKV-VDSRLKKDMR 747
>gi|193690534|ref|XP_001942837.1| PREDICTED: putative rRNA methyltransferase 3-like [Acyrthosiphon
pisum]
Length = 834
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 289/877 (32%), Positives = 458/877 (52%), Gaps = 118/877 (13%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R DK+Y LAKE G+RSRA++KL+QL+ KF FL+ + ++DLCAAPGGWMQVA Q +P
Sbjct: 8 GKQRKDKFYHLAKETGFRSRAAFKLLQLNRKFEFLQKARVLIDLCAAPGGWMQVAKQNMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V S+V+G+DL PI P+ G + L +DIT P+C++ + K ++ + D+VL+DG+PNVG
Sbjct: 68 VSSIVVGVDLYPIKPVPGCICLTEDITTPQCQSALNKELQTYKA---DVVLNDGAPNVGQ 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
W +A +Q+ L + ++KL L G F+TKVFRS+DY+++++ KQLF KV KP
Sbjct: 125 NWIYDAYTQSCLTLSALKLCCHNLREGGWFITKVFRSKDYNALMWVFKQLFRKVHATKPQ 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQG-SVEPRKVVDVLRGTKQKRHRDGYE 244
ASRS SAEI+++ Y P+K+D R + Y+F+ V PR +D T++K +GY
Sbjct: 185 ASRSESAEIFVVCQYYLKPSKLDMRFFNPSYVFKDLEVNPRVKLDSESKTQKKPKAEGYP 244
Query: 245 DGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLRV 304
D T L K + ++ NP L I DP I +H TT+E+K C D++V
Sbjct: 245 DNATILFKQLPVSTYMQCKNPAIALQDAYEIVLDDP---IIANHPSTTDEIKECCKDIKV 301
Query: 305 LGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEELKYAMD 364
LG++D + ++ W K F E+ A E + E D R L+++++ +
Sbjct: 302 LGRKDIRSIMNWW----KVFQDKEENVESGEADENKENDVELSEDERELDDVDKEIKELQ 357
Query: 365 QRKKREKKLLAKKRAKDKARKATGMQID-VMQDDYTDHE-----LFSLSSIKGKKDLAAV 418
++RE K KK K++ + T M + V +DD E +F LS+IK KK L V
Sbjct: 358 DEERRELKRKKKKTNKERTKLHTQMNLKMVHKDDLGPTEERETGVFQLSNIKTKKALDTV 417
Query: 419 EYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENYVAKRG 478
+ D+ DSED SD++ ++ KYD + Y+ K G
Sbjct: 418 IDQEPDII----DSED------------SDVEILPKKAKYDPN---------KTYLDKSG 452
Query: 479 GSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQ------------GDLDAN-PL 525
R+ ++ +++D E D D + + +DK+ D + N PL
Sbjct: 453 MFY----RSDESASEQDSSDEVDSDTEGLGF---TDKNLSSKALPKKKVTFSDPNENHPL 505
Query: 526 MVPLDDGIRPTQEEITNK---WFSQEIFA----EAVQNGDLGKLGSEDETQVDKQAEKHS 578
+ LD R +++ T+K WF +++F E ++ +L K+ + +++ K + +
Sbjct: 506 ITDLD--YRDVKDKRTSKAELWFDKDVFKNVEREEDEDYELEKMAAVIKSKGGKMY-REN 562
Query: 579 IPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDE-------E 631
+ + N+ K T+ + + D E DS +S E+ED+ E
Sbjct: 563 LDDDDDDDNENEKVNLKMTNKNIKVNQKDDET-----TDSDTESEISEAEDQSAAIPINE 617
Query: 632 VDTKAEILACAKK-------ML-------------RKKQREQILDDAYNRYMFDDDGLPD 671
D K + KK ML KK + I+D A+NR+ F+D+ LPD
Sbjct: 618 WDDKPVLTLAGKKKKKRNARMLDDDGLALGTMMASSKKMKRDIIDSAWNRFAFNDEDLPD 677
Query: 672 WFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKK 731
WF+++E +H + PV KE + + ++I+ RP KKV EAKARKK+ A+R++EK +KK
Sbjct: 678 WFVDDEAKHMRKHVPVPKELVEEFGKRHEDINIRPIKKVGEAKARKKKRALRQMEKAKKK 737
Query: 732 ANVISDQADISDRSKRKQIEQLYKSAVPKRPKKE--YVVAKKGVQVRAGKGKV------- 782
+ + +D+++ K +Q+ Q+YK K+PK+E YVV+KK + K
Sbjct: 738 LEGVVENSDVTEAEKARQVRQIYKKL--KQPKQEIKYVVSKKHTAAKRAKRPAGVKGPYK 795
Query: 783 LVDPRMKKDSRTH---GSGKARKGGSKKGNIGKARKG 816
+VDPRMKKD R K+ K G++ + K R+G
Sbjct: 796 VVDPRMKKDMRAKMRMDKKKSNKKGARAKPLVKTRRG 832
>gi|255715916|ref|XP_002554239.1| KLTH0F00704p [Lachancea thermotolerans]
gi|238935622|emb|CAR23802.1| KLTH0F00704p [Lachancea thermotolerans CBS 6340]
Length = 830
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 288/843 (34%), Positives = 449/843 (53%), Gaps = 76/843 (9%)
Query: 1 MGKVKGKH---RLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGW 56
MGK + K+ RLD+YY LAKE GYR+R+S+K++Q++ KF F+ S V+DLCAAPG W
Sbjct: 1 MGKTQKKNSKGRLDRYYYLAKEKGYRARSSFKIIQINEKFGHFMEKSKVVIDLCAAPGSW 60
Query: 57 MQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
QVA PV SL++G+D+VP+ P+ ++ + DIT +CR++++ M+ D VL
Sbjct: 61 CQVASNLCPVNSLIIGVDIVPMKPMPNVITFQSDITTEDCRSKLRGYMKTWKA---DTVL 117
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
HDG+PNVG WAQ+A +Q+ L + ++KLA + L GTFVTK+FRS+DY+ +++ QLF
Sbjct: 118 HDGAPNVGLGWAQDAFTQSHLTLQALKLAVENLVVGGTFVTKIFRSKDYNKLIWVFSQLF 177
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVE-PRKV-VDVLRGT 234
+KVE KP ASR+ SAEI+++ +KAP K+D RLLD + +F+ + P+ +
Sbjct: 178 DKVEATKPPASRNVSAEIFVVCKGFKAPKKLDSRLLDAREVFEELPDGPQNNEAKIFNPE 237
Query: 235 KQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFG--DPACSAIKDHELTT 292
K+ R R GYE+GD L +F+ +P+++LG++ T D +K + TT
Sbjct: 238 KKVRKRQGYEEGDYLLYHHKPIMEFVKCEDPIDMLGNLNKFTVNSEDHEWKILKKLKQTT 297
Query: 293 EEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRV 352
E +DL+VLGK+DFK +LKWR + + EK P + E + ++ +
Sbjct: 298 PEFMMCIEDLKVLGKKDFKMILKWR-KAARELLGIEKEEEPVVETTHLTEEEQIQSEVQA 356
Query: 353 LNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSS---- 408
L E + L ++RKK E K K+ + + T M I V + LF+L S
Sbjct: 357 LQEKQRLSQKREKRKKNEMK--QKELTRMQMNMLTPMDIGVESAELGRESLFNLKSAEKT 414
Query: 409 ------IKGKKDLAAVEYD---DDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYD 459
KGK+ + + + D+DV+ A D+ P D + +
Sbjct: 415 GILDKLAKGKRRMVFTQGELAQDNDVHIA-----DDAPLADRDDAAEA------------ 457
Query: 460 EQLEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTS-YDSDKDQG 518
++LE L+ Y+NY K+ + RAK+A +D G DED+ H+S + D
Sbjct: 458 DELESQLNSMYQNYKEKKAEKDAKY-RAKQARGGDDNEWTGFGDEDSEHSSAVEDDHVSE 516
Query: 519 DLDANPLMVPLDDGIRPTQEEITNKWF-------SQEIFAEAVQNGDLGKLGSEDETQVD 571
D +++ D+ I ++ NK +Q +F +++ G L + +E V+
Sbjct: 517 DENSDLSDSDDDEAINRLIAKMKNKEGENGLSSKAQALFNQSIFEGVEADLPAPEEP-VN 575
Query: 572 KQAEKHSIPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGADS---SDDSSSDESE 628
H ++ K D + SE DFE+V D SD S DE++
Sbjct: 576 ASVTAHVERLESLGKNQGDENNLSQESSSDSENS-DFEVVAREDEDQVMDSDFDSDDENQ 634
Query: 629 D------EEVDT-KAEILACAKKM-LRKKQREQILDDAYNRYMF-DDDGLPDWFLEEERR 679
EE+D E + A ++ L ++ + ++D+ YNRY F D + LP+WFLE+ER
Sbjct: 635 SQKEKHAEEIDIATVEAMTLAHQLALGQRTKHDLVDEGYNRYAFRDTENLPEWFLEDERP 694
Query: 680 HRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQA 739
H + RP+TKE A+K + K ++ARP KKVAEAKARK A+ +LEK++KKA +I+D
Sbjct: 695 HSKINRPITKEAAIAIKEKMKALNARPIKKVAEAKARKAMRAVARLEKIKKKAGLINDDG 754
Query: 740 DISDRSKRKQIEQLYKSAVPK---RPKKEYVVA---KKGVQVR--AGKGKV-LVDPRMKK 790
D S++ K +I +L + K +PK VVA +G+ R KGK +VD +K
Sbjct: 755 DKSEKDKADEIAKLMRKVTKKQKQKPKVTLVVATGKNRGLSGRPKGVKGKYKMVDGVLKN 814
Query: 791 DSR 793
+ R
Sbjct: 815 EQR 817
>gi|396485593|ref|XP_003842209.1| similar to AdoMet-dependent rRNA methyltransferase spb1
[Leptosphaeria maculans JN3]
gi|312218785|emb|CBX98730.1| similar to AdoMet-dependent rRNA methyltransferase spb1
[Leptosphaeria maculans JN3]
Length = 840
Score = 381 bits (978), Expect = e-102, Method: Compositional matrix adjust.
Identities = 275/834 (32%), Positives = 451/834 (54%), Gaps = 76/834 (9%)
Query: 29 KLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLE 88
KL+QL+ K++FL S ++DLCAAPG W QVA + +P GSL++G+DL PI I ++ +
Sbjct: 28 KLIQLNKKYNFLEKSKVLIDLCAAPGSWCQVASEVMPAGSLIVGVDLAPIKAIPRCITFQ 87
Query: 89 QDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQF 148
DIT +CRA +++ ++ D VLHDG+PNVG AW Q+A SQ LV+ S+KLAT+F
Sbjct: 88 SDITTDKCRATLRQHLKHLKA---DAVLHDGAPNVGTAWVQDAFSQAELVLQSMKLATEF 144
Query: 149 LAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKID 208
LA GTFVTK+FRS+DY+S+L+ QLF KVE KP +SR+ SAEI+++ YKAP +D
Sbjct: 145 LAEGGTFVTKIFRSKDYNSLLWVFNQLFTKVEATKPPSSRNVSAEIFVVCRGYKAPKNLD 204
Query: 209 PRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPL 266
P+ LD + +F P V K+KR RDGYE+GD T K ++FI + +P+
Sbjct: 205 PKFLDARSVFAELADPTPNNEAKVFNPEKKKRKRDGYEEGDWTQFKEVPVSEFIQTTDPI 264
Query: 267 EILGSVTSITF-----GDPACSAIKDHELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIK 321
+LGS+ ++F GD A + I TT+E++ C DL+VLG+ DFK LL+WR++++
Sbjct: 265 AMLGSLNKLSFEQKPNGDIAVATIDKLPETTKEIRDCCADLKVLGRADFKRLLRWRLKVR 324
Query: 322 KAFSSAEKATVPASASAPTEGENEE----------DADNRVLNEMEELKYAMDQRKKREK 371
F + K +GE +E D + ++ E+E LK + +K+++
Sbjct: 325 DIFGFSAKKKEEEEKEKVKDGEAKEGDEVAEIEDMDEEMKIQEELERLKEKDSKARKKQR 384
Query: 372 KLLAKKRAKDKAR----KATGMQIDVMQDDYT-DHELFSLSSIKGKKDLAAVEYDDDDVN 426
++ +++ K+ R AT +I + Q D +F+L ++ D
Sbjct: 385 RIENERKQKEIIRMQMNMATPFEIGLEQSGPAGDDGMFALKAV-------------DKAG 431
Query: 427 AAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENYVAKRGGSTMQRKR 486
A ++ ++ + +E + +E ++ LE LD Y +YV +R + R
Sbjct: 432 ALSKIAKGKMGQIIEREKPEESGEEEEFTDDEEDALERDLDAMYGDYVEQRSARDA-KYR 490
Query: 487 AKKAYAQEDQ-----LSEGDE---DEDTMHTSYDSDKDQGDLDANPLMVPLDDGIRPTQE 538
AK+A +++ S+ D+ D++ + DSD D + ++ D T+
Sbjct: 491 AKRARGEDEDGEWNGFSDNDKDMSDDEELVQDADSDWSSEDEEGPKTLITSLDNEDQTKR 550
Query: 539 EITN---KWFSQEIF--------AEAVQNGDLGKLGSEDETQVDKQAEK---HSIPEKAK 584
+T ++F Q+IF + ++ D + ED+T++ +A +P +
Sbjct: 551 GLTKRAARFFDQDIFKGIDGLEGLDDMEEDDDSGIDVEDDTEMKDEATPAPGKDLPVRIT 610
Query: 585 QKMANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVD-TKAEILACAK 643
+K A + E + E V + DS ++ ++D AE + A
Sbjct: 611 KKTVTIQAPQDDEDSSDDEDK--IEEVKRDESQWEQDSMPMKNGKPDIDIITAEAMTLAH 668
Query: 644 KMLR-KKQREQILDDAYNRYMFDD-DGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKE 701
+M +K + +LDD++NRY D DGLPDWFL++E RH + RP T AA+K + +
Sbjct: 669 QMATGQKTKHDLLDDSFNRYSLRDVDGLPDWFLDDENRHSKMQRPTTAAAAAAIKEKLRA 728
Query: 702 IDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKR 761
++ARP KKV EA+ARKK A +++EK++KK+ +++D+ ++++ K + I +L A K+
Sbjct: 729 LNARPIKKVREAQARKKFKAAQRMEKLKKKSALLADEEGMTEKEKAQSIARLMSRAAKKK 788
Query: 762 PKKE--YVVAK---KGVQVR--AGKGKV-LVDPRMKKDSRTHGSGKARKGGSKK 807
PK++ +VA+ KG++ R KGK +VD R+KKD R G +A K K+
Sbjct: 789 PKQKVSVIVARGGNKGIKNRPKGTKGKYKMVDARLKKDVR--GEKRAAKRNKKR 840
>gi|50304545|ref|XP_452227.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|73621940|sp|Q6CV12.1|SPB1_KLULA RecName: Full=AdoMet-dependent rRNA methyltransferase SPB1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|49641360|emb|CAH01078.1| KLLA0C00737p [Kluyveromyces lactis]
Length = 833
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 289/846 (34%), Positives = 446/846 (52%), Gaps = 86/846 (10%)
Query: 3 KVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGWMQVAV 61
K K RLDKYY LAKE GYR+R+S+K++Q++ K+ FL S V+DLCAAPG W QVA
Sbjct: 7 KKNSKGRLDKYYYLAKEKGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSWCQVAS 66
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
PV SL++G+D+VP+ + ++ + DIT +CR++++ M+ D VLHDG+P
Sbjct: 67 NLCPVNSLIIGVDIVPMKTMPNVITFQSDITTEDCRSKLRGYMKTWKA---DTVLHDGAP 123
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG +WAQ+A +Q+ L + ++KLA + L GTFVTK+FRS+DY+ +++ +QLFEKVE
Sbjct: 124 NVGLSWAQDAFTQSHLTLQALKLAVENLVVGGTFVTKIFRSKDYNKLIWVFQQLFEKVEA 183
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVE-PRKV-VDVLRGTKQKRH 239
KP ASR+ SAEI+++ +KAP K+DPRLLD K +F+ + P+ + V K+ R
Sbjct: 184 TKPPASRNVSAEIFVVCKNFKAPKKLDPRLLDPKEVFEELPDGPQNMEAKVFNPEKKVRK 243
Query: 240 RDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFG--DPACSAIKDHELTTEEVKA 297
R GYE+GD L + DF+ S +P+ +LG D +K + TT+E A
Sbjct: 244 RGGYEEGDYLLYHETGLMDFMKSEDPITMLGEYNKFIVDEEDHDWKIVKKLKQTTKEFLA 303
Query: 298 LCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEME 357
+DL+VLG++DFK +LKWR ++ E+ P P E + + + L E +
Sbjct: 304 CIEDLKVLGRKDFKMILKWRKAARELLGLDEEEEKPEIEETPLTEEEQIEKELNTLQEKQ 363
Query: 358 ELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSS--------- 408
L ++RKK E K K+ + + + I + + +F+L +
Sbjct: 364 RLSVKREKRKKNEMK--QKEIVRMQLNMINPVDIGIEAAELGRESIFNLKTAEKTGILDK 421
Query: 409 -IKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLD 467
KGK+ + D N A D+ D ++ +D +E + DE LE LD
Sbjct: 422 LAKGKRRMIF------DQNELAIDN-------DIHIDENAPLDDRDELAEADE-LESQLD 467
Query: 468 QAYENYVAKRGGSTMQRKRAKKAYAQ---------EDQLSEGDEDEDTMHTSYDSDKDQG 518
Y NY +R + RAK+A ED+ S+ + +E+T D D
Sbjct: 468 AMYSNY-KERKSERDAKFRAKQARESSEADNWNGFEDKQSDEENEEETKDYVDDDDNSDL 526
Query: 519 DLDA-----NPLMVPLDDGIRPTQEEITNK---WFSQEIFAEAVQNGDLGKLGSEDETQV 570
N L+ L R ++++K FS +F E V+ GK D V
Sbjct: 527 SDSDDDEAINQLIAKLKS--RENSSKLSSKARALFSDSLF-EGVEPDLPGKADLADSESV 583
Query: 571 DKQAEKHSIPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDE 630
+ + K++ N + + + S+ + DFEIV A D DS D SE+E
Sbjct: 584 G------DVKQLTKKRKLNPLPAEQISEAESSDEDSDFEIV-ANNEDGDVDSEYD-SEEE 635
Query: 631 EVDTK------------AEILACAKKM-LRKKQREQILDDAYNRYMFDD-DGLPDWFLEE 676
TK E + A ++ L K + ++++ +NRY F D + LP+WF+EE
Sbjct: 636 AKRTKQEKHSKDIDIATVEAMTLAHQLALGHKTKHDLIEEGFNRYSFRDMENLPEWFVEE 695
Query: 677 ERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVIS 736
E++H + +P+TKE A+K + K ++ARP KKVAEAKARKK A+ +LEK++KKA +I+
Sbjct: 696 EKQHSKINKPITKEAAMAIKDKLKALNARPIKKVAEAKARKKHRAVARLEKLKKKAGLIN 755
Query: 737 DQADISDRSKRKQIEQLYKSAVPK---RPKKEYVVA---KKGVQVR--AGKGKV-LVDPR 787
D +D S++ K ++I +L + K +PK VVA +G+ R KGK +VD
Sbjct: 756 DDSDKSEKDKAEEIAKLMRKVTKKAKQKPKVTVVVASGKNRGLSGRPKGVKGKYKMVDGV 815
Query: 788 MKKDSR 793
+K + R
Sbjct: 816 LKNEQR 821
>gi|366991182|ref|XP_003675357.1| hypothetical protein NCAS_0B09030 [Naumovozyma castellii CBS 4309]
gi|342301221|emb|CCC68987.1| hypothetical protein NCAS_0B09030 [Naumovozyma castellii CBS 4309]
Length = 839
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 282/852 (33%), Positives = 445/852 (52%), Gaps = 88/852 (10%)
Query: 1 MGKVKGKH---RLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGW 56
MGK + K+ RLD+YY LAKE GYR+R+S+K++Q++ KF FL S V+DLCAAPG W
Sbjct: 1 MGKTQKKNSKGRLDRYYYLAKEKGYRARSSFKIIQINEKFGHFLEKSKVVIDLCAAPGSW 60
Query: 57 MQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
QVA + PV SL++G+D+VP+ P+ ++ + DIT +CR++++ M+ D VL
Sbjct: 61 CQVASKLCPVNSLIIGVDIVPMKPMNNCITFQSDITTEDCRSKLRGYMKTWKA---DTVL 117
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
HDG+PNVG W Q+A +Q+ L + ++KLA + L GTFVTKVFRS+DY+ +++ +QLF
Sbjct: 118 HDGAPNVGLGWVQDAFTQSQLTLQALKLAAENLVVGGTFVTKVFRSKDYNKLIWVFQQLF 177
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVD--VLRGT 234
+KVE KP ASR+ SAEI+++ +KAP ++DPRLLD K +F+ + + ++ +
Sbjct: 178 DKVEATKPPASRNVSAEIFVVCKGFKAPKRLDPRLLDPKEVFEELPDGPQNMESKIYNPE 237
Query: 235 KQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFG--DPACSAIKDHELTT 292
K+ R R GYE+GD L +F+ + +P+ +LG D IK + TT
Sbjct: 238 KKVRKRQGYEEGDNLLYHEKDIIEFVKTEDPITMLGETNKFIIDKEDHEWKIIKKMKQTT 297
Query: 293 EEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRV 352
+E +DL+VLGK+DFK +L+WR + ++ + TE E E +
Sbjct: 298 KEFLLCIEDLKVLGKKDFKMILRWRKAARDLLGIDKEEESEIEVNPLTEEEQIE----KE 353
Query: 353 LNEMEELKYAMDQRKKREKKLLAKKR-AKDKARKATGMQIDVMQDDYTDHELFSLSS--- 408
L +++E K +R+KR+K + +K + + T M I + LF+L +
Sbjct: 354 LQDLQERKRLDQKREKRKKNEMKQKEITRMQMNMLTPMDIGIEAASLGKESLFNLKTAEK 413
Query: 409 -------IKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQ 461
KGKK + DE +D H+ ++ D + +
Sbjct: 414 TGILDKLAKGKKRMLFT---------------DEELAKDNDIHIDEELVKDRDDEAELDN 458
Query: 462 LEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQEDQ-----LSEGDEDEDTMHTSYDSDKD 516
LE LD Y +Y ++R + RAK+A +++ EG E+ + Y D
Sbjct: 459 LEAELDSMYSSYKSRRAERDA-KFRAKQARGGDNEDEWTGFEEGQEEAENDEEKYIDDDS 517
Query: 517 QGDLDA-------NPLMVPLD----DGIRPTQEEITNKWFSQEIFAEAVQNGDLGKLGSE 565
DL N L+ L DG ++ + F+ IF DL +
Sbjct: 518 DSDLSNSDDDEAINTLISKLKGQSGDGKLSSKARML---FNDPIFDNVT--ADLPTANKD 572
Query: 566 DETQVDKQAEKHSIPEKAKQ-KMANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDDSSS 624
+ T + + I +K K ++ + + ++ DFE+V +D DS
Sbjct: 573 EFTSSESVGDVSKIVKKRKHAEIQEKSDSDSDSSDENESDNSDFELVANEDSDEIFDSDY 632
Query: 625 DESEDEEVDTK------------AEILACAKKM-LRKKQREQILDDAYNRYMF-DDDGLP 670
D SE+E TK E + A ++ L +K + ++++ +NRY F D + LP
Sbjct: 633 D-SEEERTRTKKEKHAQDIDIATVEAMTLAHQLALGQKTKHDLVNEGFNRYTFRDTENLP 691
Query: 671 DWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRK 730
DWF+EEE++H + RP+TKE A+K + + ++ARP KKVAEAKARKK A+ +LEK++K
Sbjct: 692 DWFIEEEKQHSKINRPITKEAALAIKEKMRALNARPIKKVAEAKARKKMRAVARLEKIKK 751
Query: 731 KANVISDQADISDRSKRKQIEQLYKSAVPK---RPKKEYVVA---KKGVQVR--AGKGKV 782
KA +I+D +D S++ K ++I +L + K +PK VVA KG+ R KGK
Sbjct: 752 KAGLINDDSDKSEKDKAEEIAKLMRKVSKKQKTKPKVTLVVASGSNKGLSGRPKGVKGKY 811
Query: 783 -LVDPRMKKDSR 793
+VD MK + R
Sbjct: 812 KMVDGVMKNEQR 823
>gi|156089279|ref|XP_001612046.1| ribosomal RNA large subunit methyltransferase J family protein
[Babesia bovis]
gi|154799300|gb|EDO08478.1| ribosomal RNA large subunit methyltransferase J family protein
[Babesia bovis]
Length = 959
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 277/857 (32%), Positives = 442/857 (51%), Gaps = 123/857 (14%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R DKYY LAKE GYR+R+++K++QL KF+ + + ++DLCAAPGGW+QVA + +P
Sbjct: 8 GKERQDKYYYLAKEQGYRARSAFKIIQLAKKFNIFENCNVLVDLCAAPGGWLQVASKHLP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V S+++G+DLVPI PI+G V+++ DI CR + + + V D+VLHDG+PNVG
Sbjct: 68 VSSIIIGVDLVPIRPIKGVVTIQADIRTQRCRNLINQQLRGAEV---DVVLHDGAPNVGA 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
W +A +QN LVI++ KLA+ L G FVTK+FRS DY+S+++ L + F++V+V KP+
Sbjct: 125 NWNLDAFNQNVLVIEAAKLASNVLRKGGIFVTKIFRSADYNSLIWTLGKCFDRVKVTKPS 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF--QG---------SVEPRKVVDVLRGT 234
+SR+ SAEI+ + I ++ +DP++ + + +F QG S +P + ++LR
Sbjct: 185 SSRNVSAEIFAVCIGFRTLKSLDPKIFNCENVFISQGGAPADEPEESTKPSSLSELLRQV 244
Query: 235 KQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF--GDPACSA-------- 284
K K +++GYE+GD R+ S+ +F+ S+NP E+L S F G A
Sbjct: 245 K-KVNKEGYEEGD-DFREYSI-IEFLTSSNPAEMLVSSNRFVFRLGSKASGIDNEAELLQ 301
Query: 285 -IKDHELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAF---SSAEKATVPASASAPT 340
++ H LTTEE++ LC DL+V G+ D + LLKWR ++ K F S EK V
Sbjct: 302 KVESHSLTTEEIRLLCSDLKVAGRSDLQRLLKWRQKLHKEFFPVSKPEKHVVDTVTPVDA 361
Query: 341 EGENEEDADNRVLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTD 400
+ E EE+A NR ++ L ++ E+K ++R K +KA + D D
Sbjct: 362 DAEPEEEALNR--EQIAALDRVRKDLRRTERK---QRREMMKHKKALAGSASISID--AD 414
Query: 401 HELFSLSSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDE 460
ELF LS+++G D+ + +D++ +++++ +D + SD DS E + + D+
Sbjct: 415 PELFRLSTLRG-HDIDEILDEDNESDSSSKAGDDFLYAGNDNASDYSDTDSMELQFETDD 473
Query: 461 ------QLEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQEDQLSE-GDEDEDTMHTSYDS 513
Q+E L+ +E + Q K AKK ++ E G E + + DS
Sbjct: 474 EDDRVAQMEVDLEVQHE---MSKLADDRQPKVAKKLTRRQRVYQERGAE----LSSLLDS 526
Query: 514 DKDQGDLDAN----------------------PLMVPLD----DGIRPTQEEITNKWFSQ 547
+ + L A P V LD D + + + ++WF Q
Sbjct: 527 MQYEARLKAQQEMQESDEEESSDEEPEVTEPVPQAVTLDNTTNDKTQSADDAMVDRWFDQ 586
Query: 548 EIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIP-EKAKQKMANDAAGPKSTHNQVSEVEG 606
++F H +P E A+++ + K E
Sbjct: 587 DVF--------------------------HDMPRETARKRKTRETPNDKKNKK-----EP 615
Query: 607 DFEIVPAPGADSSDDSSSDESEDEEV---DTKAEILACAKKMLRKKQREQILDDAYNRYM 663
F +VPA + + DE E E +T AE+ A ++ K R ++D AYNR
Sbjct: 616 TFTVVPAVSDADAVERVRDEVELELTRNKETIAEVQAMGSLLINKSTRMALIDGAYNRRT 675
Query: 664 FDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMR 723
FDD LP WF ++E++H PVTKE + +A+ E+ RP +KV EA+ R+K R
Sbjct: 676 FDDGDLPSWFEDDEKKHSNYELPVTKELMKRYRAKLYELKNRPIRKVLEARGRRKMRVQR 735
Query: 724 KLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKEYVVAKKG----VQVRAGK 779
KL+ V + + + S ++ +K + ++ +A KR +K YVV+++G GK
Sbjct: 736 KLKSVLPRVEALQNSDTGSAKTAKKLLRKVQNTAANKR-EKVYVVSRRGGAASTAPSGGK 794
Query: 780 G--KV--LVDPRMKKDS 792
G KV +VD RMKKD+
Sbjct: 795 GARKVTKVVDKRMKKDN 811
>gi|6319796|ref|NP_009877.1| Spb1p [Saccharomyces cerevisiae S288c]
gi|6226708|sp|P25582.2|SPB1_YEAST RecName: Full=AdoMet-dependent rRNA methyltransferase SPB1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase; AltName: Full=Suppressor of PAB1
protein 1
gi|1907120|emb|CAA42391.1| putative methylase [Saccharomyces cerevisiae]
gi|151943780|gb|EDN62080.1| AdoMet-dependent rRNA methyltransferase [Saccharomyces cerevisiae
YJM789]
gi|285810648|tpg|DAA07432.1| TPA: Spb1p [Saccharomyces cerevisiae S288c]
Length = 841
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 265/824 (32%), Positives = 429/824 (52%), Gaps = 112/824 (13%)
Query: 1 MGKVKGKH---RLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGW 56
MGK + K+ RLD+YY LAKE GYR+R+S+K++Q++ K+ FL S V+DLCAAPG W
Sbjct: 1 MGKTQKKNSKGRLDRYYYLAKEKGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSW 60
Query: 57 MQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
QVA + PV SL++G+D+VP+ P+ ++ + DIT +CR++++ M+ D VL
Sbjct: 61 CQVASKLCPVNSLIIGVDIVPMKPMPNVITFQSDITTEDCRSKLRGYMKTWKA---DTVL 117
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
HDG+PNVG W Q+A +Q+ L + ++KLA + L GTFVTK+FRS+DY+ +++ +QLF
Sbjct: 118 HDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLVVNGTFVTKIFRSKDYNKLIWVFQQLF 177
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVD--VLRGT 234
EKVE KP ASR+ SAEI+++ +KAP ++DPRLLD K +F+ + ++ ++ +
Sbjct: 178 EKVEATKPPASRNVSAEIFVVCKGFKAPKRLDPRLLDPKEVFEELPDGQQNMESKIYNPE 237
Query: 235 KQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF--GDPACSAIKDHELTT 292
K+ R R GYE+GD L + DF+ + +P+ +LG + T D +K + TT
Sbjct: 238 KKVRKRQGYEEGDNLLYHETSILDFVRTEDPISMLGEMNKFTIDENDHEWKILKKLKQTT 297
Query: 293 EEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASAS-APTEGENEEDADNR 351
+E ++ +DL+VLGK+DFK +L+WR ++ K P E + + D +
Sbjct: 298 DEFRSCIEDLKVLGKKDFKMILRWRKIAREILGIEVKDDAKTEIEVVPLTEEEQIEKDLQ 357
Query: 352 VLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSS--- 408
L E + L ++R+K E K K+ + + T I + LF+L +
Sbjct: 358 GLQEKQRLNVKRERRRKNEMK--QKELQRMQMNMITPTDIGIEAASLGKESLFNLKTAEK 415
Query: 409 -------IKGKKDLAAVE---------YDDDDV------------------NAAAEDSED 434
KGKK + + Y D+++ NA D +
Sbjct: 416 TGILNDLAKGKKRMIFTDDELAKDNDIYIDENIMIKDKDSAADADDLESELNAMYSDYKT 475
Query: 435 ERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQ- 493
R RD + D E E + GS +++ K Y +
Sbjct: 476 RRSERDAKFRAKQARGGDNE----------------EEWTGFNEGSLEKKEEEGKDYIED 519
Query: 494 -EDQLSEGDEDEDTMHTSYDS--DKDQGD--LDANPLMV---PLDDGIRPTQEEITNKWF 545
+D+ EGD D+D T+ S +GD L + M+ P+ + + P
Sbjct: 520 NDDEGVEGDSDDDEAITNLISKLKGQEGDHKLSSKARMIFNDPIFNNVEP---------- 569
Query: 546 SQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKMANDAAGPKSTHNQVSEVE 605
++ V +G + D ++++K+ KH E+ QK + +S+ +
Sbjct: 570 --DLPVNTVNDGIMSSESVGDISKLNKK-RKH---EEMHQKQDEADSSDESSSDDSD--- 620
Query: 606 GDFEIVPAPGADSSDDSSSDESEDEEVDTK------------AEILACAKKM-LRKKQRE 652
FEIV A DS D SE+E+ TK E + A ++ L +K +
Sbjct: 621 --FEIVANDNASEEFDSDYD-SEEEKNQTKKEKHSRDIDIATVEAMTLAHQLALGQKNKH 677
Query: 653 QILDDAYNRYMF-DDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVA 711
++D+ +NRY F D + LPDWFLE+E+ H + +P+TKE A+K + K ++ARP KKVA
Sbjct: 678 DLVDEGFNRYTFRDTENLPDWFLEDEKEHSKINKPITKEAAMAIKEKIKAMNARPIKKVA 737
Query: 712 EAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYK 755
EAKARK+ A+ +LEK++KKA +I+D +D +++ K ++I +L +
Sbjct: 738 EAKARKRMRAVARLEKIKKKAGLINDDSDKTEKDKAEEISRLMR 781
>gi|256270950|gb|EEU06076.1| Spb1p [Saccharomyces cerevisiae JAY291]
gi|349576697|dbj|GAA21867.1| K7_Spb1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392300725|gb|EIW11815.1| Spb1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 841
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 265/824 (32%), Positives = 429/824 (52%), Gaps = 112/824 (13%)
Query: 1 MGKVKGKH---RLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGW 56
MGK + K+ RLD+YY LAKE GYR+R+S+K++Q++ K+ FL S V+DLCAAPG W
Sbjct: 1 MGKTQKKNSKGRLDRYYYLAKEKGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSW 60
Query: 57 MQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
QVA + PV SL++G+D+VP+ P+ ++ + DIT +CR++++ M+ D VL
Sbjct: 61 CQVASKLCPVNSLIIGVDIVPMKPMPNVITFQSDITTEDCRSKLRGYMKTWKA---DTVL 117
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
HDG+PNVG W Q+A +Q+ L + ++KLA + L GTFVTK+FRS+DY+ +++ +QLF
Sbjct: 118 HDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLVVNGTFVTKIFRSKDYNKLIWVFQQLF 177
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVD--VLRGT 234
EKVE KP ASR+ SAEI+++ +KAP ++DPRLLD K +F+ + ++ ++ +
Sbjct: 178 EKVEATKPPASRNVSAEIFVVCKGFKAPKRLDPRLLDPKEVFEELPDGQQNMESKIYNPE 237
Query: 235 KQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF--GDPACSAIKDHELTT 292
K+ R R GYE+GD L + DF+ + +P+ +LG + T D +K + TT
Sbjct: 238 KKVRKRQGYEEGDNLLYHETSILDFVRTEDPISMLGEMNKFTIDENDHEWKILKKLKQTT 297
Query: 293 EEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASAS-APTEGENEEDADNR 351
+E ++ +DL+VLGK+DFK +L+WR ++ K P E + + D +
Sbjct: 298 DEFRSCIEDLKVLGKKDFKMILRWRKIAREILGIEVKDDAKTEIEVVPLTEEEQIEKDLQ 357
Query: 352 VLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSS--- 408
L E + L ++R+K E K K+ + + T I + LF+L +
Sbjct: 358 GLQEKQRLNIKRERRRKNEMK--QKELQRMQMNMITPTDIGIEAASLGKESLFNLKTAEK 415
Query: 409 -------IKGKKDLAAVE---------YDDDDV------------------NAAAEDSED 434
KGKK + + Y D+++ NA D +
Sbjct: 416 TGILNDLAKGKKRMIFTDDELAKDNDIYIDENIMIKDKDSAADADDLESELNAMYSDYKT 475
Query: 435 ERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQ- 493
R RD + D E E + GS +++ K Y +
Sbjct: 476 RRSERDAKFRAKQARGGDNE----------------EEWTGFNEGSLEKKEEEGKDYIED 519
Query: 494 -EDQLSEGDEDEDTMHTSYDS--DKDQGD--LDANPLMV---PLDDGIRPTQEEITNKWF 545
+D+ EGD D+D T+ S +GD L + M+ P+ + + P
Sbjct: 520 NDDEGVEGDSDDDEAITNLISKLKGQEGDHKLSSKARMIFNDPIFNNVEP---------- 569
Query: 546 SQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKMANDAAGPKSTHNQVSEVE 605
++ V +G + D ++++K+ KH E+ QK + +S+ +
Sbjct: 570 --DLPVNTVNDGIMSSESVGDISKLNKK-RKH---EEMHQKQDEADSSDESSSDDSD--- 620
Query: 606 GDFEIVPAPGADSSDDSSSDESEDEEVDTK------------AEILACAKKM-LRKKQRE 652
FEIV A DS D SE+E+ TK E + A ++ L +K +
Sbjct: 621 --FEIVANDNASEEFDSDYD-SEEEKNQTKKEKHSRDIDIATVEAMTLAHQLALGQKNKH 677
Query: 653 QILDDAYNRYMF-DDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVA 711
++D+ +NRY F D + LPDWFLE+E+ H + +P+TKE A+K + K ++ARP KKVA
Sbjct: 678 DLVDEGFNRYTFRDTENLPDWFLEDEKEHSKINKPITKEAAMAIKEKIKAMNARPIKKVA 737
Query: 712 EAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYK 755
EAKARK+ A+ +LEK++KKA +I+D +D +++ K ++I +L +
Sbjct: 738 EAKARKRMRAVARLEKIKKKAGLINDDSDKTEKDKAEEISRLMR 781
>gi|448538470|ref|XP_003871503.1| Spb1 AdoMet-dependent methyltransferase [Candida orthopsilosis Co
90-125]
gi|380355860|emb|CCG25379.1| Spb1 AdoMet-dependent methyltransferase [Candida orthopsilosis]
Length = 808
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 279/833 (33%), Positives = 456/833 (54%), Gaps = 76/833 (9%)
Query: 1 MGKVKGKH---RLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGW 56
MGKV+ K+ RLD+YY LAKE GYR+R+S+K++Q++ KF FL S V+DLCAAPG W
Sbjct: 1 MGKVQKKNSKGRLDRYYYLAKEKGYRARSSFKIIQINEKFGHFLEKSKVVIDLCAAPGSW 60
Query: 57 MQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
QVA Q PV SL++G+D+VPI P+ ++ + DIT +CR++++ M+ D VL
Sbjct: 61 CQVASQLCPVNSLIIGVDIVPIKPLPNCITFQSDITTEDCRSKLRGHMKTWKA---DTVL 117
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
HDG+PNVG W Q+A +Q+ L + ++KLA + L GTFVTK+FRS+DY+++++ +QLF
Sbjct: 118 HDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLIVGGTFVTKIFRSRDYNNLMWVFQQLF 177
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVD---VLRG 233
+KVE KP +SR+ SAEI+++ +KAP K+DPRLLD + +F+ + + V + V
Sbjct: 178 DKVEATKPPSSRNVSAEIFVVCRGFKAPKKLDPRLLDPREVFEELNDKKSVNNEEKVFNP 237
Query: 234 TKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF--GDPACSAIKDHELT 291
K++R R GYE+GD TL FI ++P+ LG + D +K +
Sbjct: 238 EKKRRQRQGYEEGDYTLFHTMPIMQFIKEDDPINQLGQLNKFDIDDNDHEWKIVKKLKSY 297
Query: 292 TEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNR 351
+EE++ DL++LGK++FKH+L++R Q + ++ P E + D +
Sbjct: 298 SEELRECFKDLKILGKKEFKHILRFRKQARDLLGVDKEEEKPEIEVEELTEEQKIDQE-- 355
Query: 352 VLNEM-EELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSIK 410
LN+M E+ K + KK +L K+ +++ + T M I + LF+L + +
Sbjct: 356 -LNQMLEKQKQKTKRAKKTANELKQKEIIRNQMQMVTDMNIGIDAAQIGADSLFNLKTAE 414
Query: 411 GKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDE--QLEEVLDQ 468
L+ + A SE++R RDT+ H ++E DE +LE LD
Sbjct: 415 KSGQLSKLAAG----KKAMVFSEEDRA-RDTEIHF-----DEQEANSEDEIDELEAQLDD 464
Query: 469 AYENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDANPLMVP 528
YE Y Q +RA++ + +L+ G +DE ++D +++
Sbjct: 465 MYEQY---------QTRRAERDAKYKAKLARGGDDE-----AWDG------IESADEEKD 504
Query: 529 LDDGIRPTQEEITNKWFSQEIFAEAVQNGDLGKLGSE--DETQVDKQAEKHSIPEKAK-- 584
+D + + + ++ AE Q+G+L K + + + + E+++
Sbjct: 505 EEDYEMESSDSDEDDDEHIKLIAEGKQSGELTKTARSFFQSDSIFNELDDEDLIEESRPR 564
Query: 585 -QKMANDAAGPKSTHNQVSEV------EGDFEIVPAPGADSSDDSSSDE----SEDEEVD 633
+K A A+ P + V V + DFEIVP G D ++ + S E VD
Sbjct: 565 AEKKATAASVPTNGKADVPAVDFDSDSDSDFEIVPNTGDDEEEEEEDSDDEMLSNKERVD 624
Query: 634 -TKAEILACAKKM-LRKKQREQILDDAYNRYMF-DDDGLPDWFLEEERRHRQAIRPVTKE 690
T AE + A K+ L + ++ ++++ NRY F D + LP+WFL++E++H + I+P++KE
Sbjct: 625 LTTAEAMTLAHKVALGQMSKKDLIEEGINRYSFRDKENLPEWFLDDEQKHSKLIKPISKE 684
Query: 691 EIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQI 750
A+K + K+++ARP KKV EAK RKK A+R+LEK++KK+++I++ + S+ K +I
Sbjct: 685 ASLAIKEKLKQLNARPIKKVLEAKGRKKMRALRRLEKLKKKSDLINEDSSKSEYDKAAEI 744
Query: 751 EQLYK----SAVPKRPKKEYVVAK---KGVQVR--AGKGKV-LVDPRMKKDSR 793
+L + S KR K VVA+ +G+ R KGK +VD MK + R
Sbjct: 745 SKLMQKAKNSGKDKRKKMTVVVARGSNRGLSGRPKGVKGKYKMVDGVMKNEQR 797
>gi|260941558|ref|XP_002614945.1| hypothetical protein CLUG_04960 [Clavispora lusitaniae ATCC 42720]
gi|238851368|gb|EEQ40832.1| hypothetical protein CLUG_04960 [Clavispora lusitaniae ATCC 42720]
Length = 825
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 283/856 (33%), Positives = 452/856 (52%), Gaps = 105/856 (12%)
Query: 1 MGKVKGKH---RLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGW 56
MGK + K+ RLD+YY LAKE GYR+R+S+K++Q++ K+ FL S V+DLCAAPG W
Sbjct: 1 MGKTQKKNSKGRLDRYYYLAKEKGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSW 60
Query: 57 MQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
QVA P+ SL++G+D+VPI P+ ++ + DIT +CR++++ ++ D VL
Sbjct: 61 CQVASNLCPINSLIIGVDIVPIKPLPNCITFQSDITTEDCRSKLRGHLKTWKA---DTVL 117
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
HDG+PNVG W Q+A +Q+ LV+ ++KLA + L GTFVTKVFRS+DY+++++ +QLF
Sbjct: 118 HDGAPNVGLGWVQDAFTQSQLVLKALKLACENLTQGGTFVTKVFRSKDYNNLMWVFQQLF 177
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGT 234
+KVE KP ASR+ SAEI+++ +KAP K+DPRLLD K +F+ + V
Sbjct: 178 DKVEATKPPASRNVSAEIFVVCKGFKAPKKMDPRLLDPKEVFEELPTENTNNEAKVFNPE 237
Query: 235 KQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF---GDPACSAIKDHELT 291
K R R GYE+GD L K DF+ P+ LGS+ +T D ++
Sbjct: 238 KHTRKRQGYEEGDYLLYKEMPLADFVRDEEPINTLGSLNKLTEPPKDDKEWKMLRKLRHC 297
Query: 292 TEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNR 351
T E + DLRVLGK+DFK +LK+R + + ++ E E+
Sbjct: 298 TPEFRECIKDLRVLGKKDFKLILKFRKEARALLGLDDQEEEKPEIEVEPITEEEQ----- 352
Query: 352 VLNEMEELKYAMDQRKKREKKLLAKKRAKDKAR----KATGMQIDVMQDDYTDHELFSLS 407
+ E+E+L Q+K+REKK + + K+ R T M I + LF++
Sbjct: 353 ITKELEQLTEKQKQKKRREKKRANELKQKEIKRVQMSMLTDMSIGIEAGQSGAESLFNIK 412
Query: 408 S----------IKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRK 457
S KGKK + E ++ DS +E S ++DS+EE
Sbjct: 413 SAEKTGQIEDLAKGKKRMVFTE--EERAKGTEIDSGEE----------SHEVDSEEEL-- 458
Query: 458 YDEQLEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDE---DTMHTSYDSD 514
+ LE LD Y+ Y ++ RA+K +L+ GD D+ D + + +S+
Sbjct: 459 --DNLEAQLDGMYQEY---------KKTRAEKDANYRAKLARGDADDEAWDGIQSGEESE 507
Query: 515 KDQGDLD-----ANPLMVPLDDGIRPTQEEITNKWFSQEIFAEAVQNGDLGKLGSED--- 566
++ + D + ++ IR E+ + S+ N G L ED
Sbjct: 508 ENGMEKDYEMDVDSDEESDDEEEIRAMYEKKHKEDLSKNAKMFFASNSVFGDLKDEDLLE 567
Query: 567 -----ETQVDKQAEKHSIPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIV---PAPGADS 618
E Q + + ++ + +++++++ + +G +E E DFEIV P DS
Sbjct: 568 AITPQEPQANGKQQQLPV-KRSREEVEKEDSG--------AESESDFEIVEAQPEEEMDS 618
Query: 619 SDDS---------SSDESEDEEVD-TKAEILACAKKM-LRKKQREQILDDAYNRYMF-DD 666
DS S +S E V+ + E + A ++ L + + ++++ N+Y F D
Sbjct: 619 EYDSEEESIGRQLSKAQSHKERVELSTVEAMTLAHQVALGQMNKNDLINEGINKYSFRDR 678
Query: 667 DGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLE 726
D LP+WF+E+E++H + +P+TKE AA++ + KE++ARP KKV EA+ RKK A+R+LE
Sbjct: 679 DNLPEWFMEDEKKHSKITKPITKEAAAAIREKQKELNARPIKKVLEAQGRKKMRALRRLE 738
Query: 727 KVRKKANVISDQADISDRSKRKQIEQLYKSAVPK---RPKKEYVVA---KKGV--QVRAG 778
K++KK+++I++ S+R K ++I +L + K +PK VVA KG+ + R
Sbjct: 739 KIKKKSDMINEDGAKSERDKAEEISRLMRKLTKKQKVKPKTTLVVASGSNKGLSGRPRGV 798
Query: 779 KGKV-LVDPRMKKDSR 793
KGK +VD MK + R
Sbjct: 799 KGKYKMVDGVMKNEQR 814
>gi|241956944|ref|XP_002421192.1| 2'-O-ribose RNA methyltransferase, putative; AdoMet-dependent rRNA
methyltransferase, putative;
S-adenosyl-L-methionine-dependent methyltransferase,
putative [Candida dubliniensis CD36]
gi|223644535|emb|CAX41353.1| 2'-O-ribose RNA methyltransferase, putative [Candida dubliniensis
CD36]
Length = 830
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 271/792 (34%), Positives = 415/792 (52%), Gaps = 67/792 (8%)
Query: 1 MGKVKGKH---RLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGW 56
MGK + KH RLD+YY LAKE GYR+R+S+K+VQ++ K+ FL S V+DLCAAPG W
Sbjct: 1 MGKQQKKHSKGRLDRYYYLAKEKGYRARSSFKIVQINEKYGHFLEKSKVVIDLCAAPGSW 60
Query: 57 MQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
QVA Q PV SL++G+D+VPI P+ ++ + DIT +CR+R++ M+ D VL
Sbjct: 61 CQVASQLCPVNSLIIGVDIVPIKPLPNVITFQSDITTEDCRSRLRGHMKTWKA---DTVL 117
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
HDG+PNVG W Q+A +Q+ L + ++KLA + L GTFVTK+FRS+DY+++++ +QLF
Sbjct: 118 HDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLTAGGTFVTKIFRSRDYNNLMWVFQQLF 177
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGT 234
EKVE KP ASR+ SAEI+++ +KAP K+DPRLLD K +F+ G+ + +
Sbjct: 178 EKVEATKPPASRNVSAEIFVVCKGFKAPKKLDPRLLDPKEVFEELGNEKQNNEAKIFNPE 237
Query: 235 K--QKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHE--- 289
K +R R GYE+GD TL DFI ++P+ LGS+ F PA DHE
Sbjct: 238 KFSSQRQRQGYEEGDYTLFHTMPIMDFIKEDDPINQLGSLNK--FELPAKD---DHEWKI 292
Query: 290 -----LTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGEN 344
L T E+ DL+VLG+++FK +LK+R Q + + A E
Sbjct: 293 LSKLKLCTPELLECIKDLKVLGRKEFKMILKFRKQARDILGIDKDDEDNDKAEIEVEPLT 352
Query: 345 EED-ADNRVLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHEL 403
EE D + + ME K + KK +L K+ +++ T M I + L
Sbjct: 353 EEQKIDQELQDLMERQKQKAKRAKKNANELKQKEIVRNQMNMLTDMNIGIEAAQIGADSL 412
Query: 404 FSLSS----------IKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDE 453
F+L + KGKK + DE +D + H+ + + ++
Sbjct: 413 FNLKTAEKTGQLDKLAKGKKKMIF---------------NDEELAKDNEIHIDENEEVED 457
Query: 454 ERRKYDEQLEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQ-EDQLSEGDEDEDTMHTSYD 512
+ DE LE LD Y Y A++ RAK+A D+ G ED+D +
Sbjct: 458 SADELDE-LENQLDDMYHQYQARKAERDANY-RAKQARGDANDEAWNGIEDDDDQDEDVE 515
Query: 513 SDKDQGDLDANPLMVPLDDGIRPTQEEITNKW--FSQEIFAEAVQNGDLGKLGSEDETQV 570
S KD + D+ IR E+ +N ++ FA +LG +E Q
Sbjct: 516 SGKDYEMESESDSDSDDDEHIRLIAEKKSNGLSKTARSFFASDSIFNELGDDAILEEVQN 575
Query: 571 DKQAEKHSIPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVP---------APGADSSDD 621
+ E + + ++ + + DFEIVP D S++
Sbjct: 576 RTNNTNGKVVEPVTENNSEPVDDDDDSNGDDDDDDSDFEIVPNQESDDDESMDSDDESNN 635
Query: 622 SSSDESEDEEVD-TKAEILACAKKM-LRKKQREQILDDAYNRYMF-DDDGLPDWFLEEER 678
S ++VD E + A ++ L +K + ++D+ NRY F D D LPDWF+++E+
Sbjct: 636 VKSATHHKQKVDLATVEAMTLAHQVALGQKNKHDLIDEGINRYSFRDKDNLPDWFVDDEK 695
Query: 679 RHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQ 738
RH + ++P+TKE A+K + K+++ARP KKV EA+ RKK A+R+LEK++KK+++I++
Sbjct: 696 RHSKIVKPITKEAALAIKEKQKQLNARPIKKVLEAQGRKKMRALRRLEKIKKKSDLINED 755
Query: 739 ADISDRSKRKQI 750
+ S+R K +I
Sbjct: 756 SGKSERDKADEI 767
>gi|159477739|ref|XP_001696966.1| hypothetical protein CHLREDRAFT_105410 [Chlamydomonas reinhardtii]
gi|158274878|gb|EDP00658.1| predicted protein [Chlamydomonas reinhardtii]
Length = 328
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 173/323 (53%), Positives = 242/323 (74%), Gaps = 11/323 (3%)
Query: 1 MGKVK-GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQV 59
MGK K GK RLDK+Y LAKE G+RSRA++KL+QL+ K++FL +LDLCAAPGGW+QV
Sbjct: 1 MGKTKKGKGRLDKFYHLAKEQGFRSRAAFKLIQLNRKYNFLGKCRTLLDLCAAPGGWLQV 60
Query: 60 AVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDG 119
A + +PVGSL+LG+DL PI PIRG +L QDIT +CR +K+ E G D+VLHDG
Sbjct: 61 AAKTMPVGSLILGVDLAPIKPIRGVKTLVQDITTQQCRTAIKR---EAGGAKMDVVLHDG 117
Query: 120 SPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKV 179
+PNVGGAWA EA +Q++LV+DS++LA + LAPKGTFVTK+FRS+DY+++LY QLF+KV
Sbjct: 118 APNVGGAWASEAYNQSSLVLDSLRLAVETLAPKGTFVTKIFRSKDYNALLYAFNQLFDKV 177
Query: 180 EVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRH 239
E KPAASR+ SAEI+++ + +KAPAKIDPRLLD K LFQ + P ++ + KQ+R
Sbjct: 178 EATKPAASRNTSAEIFVVCLGFKAPAKIDPRLLDSKILFQKVMGPEALLR--QKIKQRRF 235
Query: 240 RDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALC 299
R+GY++G +T ++++ A F+ S+ P+E+LG+ F + + I+ H TT E++ LC
Sbjct: 236 REGYDEGFSTSQRITSALAFLVSDGPVEMLGN-----FTEELAAKIRSHAATTAEIRTLC 290
Query: 300 DDLRVLGKQDFKHLLKWRMQIKK 322
DL+VLG+ +FK LL+WR+ ++K
Sbjct: 291 KDLQVLGRSEFKQLLRWRLALRK 313
>gi|429329913|gb|AFZ81672.1| hypothetical protein BEWA_010890 [Babesia equi]
Length = 762
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 271/837 (32%), Positives = 430/837 (51%), Gaps = 109/837 (13%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDKYY LAKEHGYRSR+++K++QL KF+F + + V+DLCAAPGGW+QVA +++P
Sbjct: 8 GKDRLDKYYHLAKEHGYRSRSAFKIIQLAKKFNFFENCNVVVDLCAAPGGWLQVASKQLP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V S ++G+DLV I PI+G ++ + DI +CR+ + ++ V DLVLHDG+PN+G
Sbjct: 68 VSSTIIGVDLVQIKPIKGVLTFQADIRTAKCRSMIMNHLKGAEV---DLVLHDGAPNMGC 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
W +A +QN LV+D+ KLA+ L G FVTK+FRS DY+S+++ L F+KV+V KP
Sbjct: 125 NWNMDAFNQNVLVLDAAKLASSILKKGGIFVTKIFRSADYNSLIWMLSNCFDKVKVTKPQ 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF----QGSVE--PRKVVDVLRGTKQKRH 239
+SR+ SAEI+ + I +K+ +DPRL + Y+F Q E +K ++ L K K
Sbjct: 185 SSRNVSAEIFAVCIGFKSLKGLDPRLFNCDYVFLSERQTHAEDNAKKSLNQLIKEKSKAR 244
Query: 240 RDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF------GDPACSAIKDHELTTE 293
++GYE GD + +F+ S+NP +L S + + F I++ +TT+
Sbjct: 245 KEGYEAGDFCEHTI---LEFLRSDNPANLLVSASRLVFRSKDSEDSDILDIIQNDPITTD 301
Query: 294 EVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSS--AEKATVPASASAPTEGENEEDADNR 351
E+K LC D++V GK D + +LKWR +I K + EKA P E D ++
Sbjct: 302 EIKLLCSDIQVAGKADLQSILKWRTKILKHLPNFMPEKAV-----DKPDMNNIELDEESL 356
Query: 352 VLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSIKG 411
+ E ++L ++ +KR ++ K K K+ + + V D ELF SS+ G
Sbjct: 357 IELEKQKLSDIVETNRKRAERKQRKLLKKRKSVGKSAAIVGV------DPELFQFSSLSG 410
Query: 412 KKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYE 471
+ +D+ + S E + E S D + + D +++ L++A E
Sbjct: 411 NR--------PEDIPYSESSSSVEEIELEESELSSDDEANKILKMDIDLEVQHSLNKANE 462
Query: 472 NYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDANPLMVPLDD 531
K+ + +R++ + E + D + Q +DA+ DD
Sbjct: 463 EDKQKKHSNLTRRQKVNMEKSLE------------LTNFIDHMQYQARIDASEAKQDSDD 510
Query: 532 GIRPTQEE-ITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKMAND 590
P + E I+ +WF Q+IF E ++ ++ K D
Sbjct: 511 --EPDRSELISERWFDQDIFNEDIETVNVSKRRKSD------------------------ 544
Query: 591 AAGPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKA--EILACAKKMLRK 648
PK DF IVPA + S DE +D D++ +I A M+ K
Sbjct: 545 ---PKD----------DFVIVPAISNAEIEASKRDEFDDLSKDSQTVEQIQALGSLMINK 591
Query: 649 KQREQILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAK 708
K R ++D YN+ FDD LP WF+E+E +H + P++K+ + KA+ EI RP +
Sbjct: 592 KTRMSLIDGTYNKRTFDDGELPSWFIEDENKHNKQELPISKDLMKKYKAKLLEIKNRPIR 651
Query: 709 KVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKEYVV 768
KV EAKARKK A +K++ + + +S+ DI+ +++ + K+ + +K YVV
Sbjct: 652 KVLEAKARKKMRADKKIKGILPRIESMSN--DITKAGNARKLIKKVKNISSDKREKVYVV 709
Query: 769 A------KKGVQVRAGKGKV--LVDPRMKKDSRTHGSGKARKGGSKKGNIGKARKGK 817
+ K ++G K+ +VD R+KKD R S +A KG SK+ K+RK +
Sbjct: 710 SRGIGRTKTSKPSKSGSRKIYKVVDKRLKKDKR--NSKEAAKGRSKR----KSRKAR 760
>gi|367002363|ref|XP_003685916.1| hypothetical protein TPHA_0E03930 [Tetrapisispora phaffii CBS 4417]
gi|357524215|emb|CCE63482.1| hypothetical protein TPHA_0E03930 [Tetrapisispora phaffii CBS 4417]
Length = 842
Score = 365 bits (938), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 270/849 (31%), Positives = 447/849 (52%), Gaps = 75/849 (8%)
Query: 1 MGKVKGKH---RLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGW 56
MGK + K+ RLD+YY LAKE GYR+R+S+K++Q++ K+ FL S V+DLCAAPG W
Sbjct: 1 MGKTQKKNSKGRLDRYYYLAKEKGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSW 60
Query: 57 MQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
QVA + PV SL++G+D+VP+ + ++ + DIT +CR++++ M+ D VL
Sbjct: 61 CQVASKLCPVNSLIIGVDIVPMKSMPNVITFQSDITTEDCRSKLRGHMKTWKA---DTVL 117
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
HDG+PNVG W Q+A +Q+ L + ++KLA + L GTFVTK+FRS+DY+ +++ +QLF
Sbjct: 118 HDGAPNVGLGWVQDAFTQSHLTLQALKLAVENLVVGGTFVTKIFRSKDYNKLIWVFQQLF 177
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ------GSVEPRKVVDV 230
+KVE KP ASR+ SAEI+++ +KAP K+DPR+LD + +F+ ++E + +
Sbjct: 178 DKVEATKPPASRNVSAEIFVVCKNFKAPKKLDPRILDPREVFEELPDGPANMESK----I 233
Query: 231 LRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFG--DPACSAIKDH 288
K+ R R GYE+GD L DF+ + +P+ +LG T+ D +K
Sbjct: 234 YNPEKKVRKRQGYEEGDYLLYHELPIMDFVNTEDPITLLGENNKFTYDKEDHQWKILKKM 293
Query: 289 ELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDA 348
+ T+ E A +DL+VLGK+DFK +LKWR + + +K P E + D
Sbjct: 294 KQTSTEFLACIEDLKVLGKKDFKMILKWR-KAARDLLGIDKEEEVEVEVNPLTEEEQIDK 352
Query: 349 DNRVLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSS 408
+ + E + L ++RKK E K K+ + + T I + LF+L S
Sbjct: 353 ELSAMQERQRLNLRREKRKKNESK--QKELIRMQMNMLTPADIGIEAASIGRESLFNLKS 410
Query: 409 ----------IKGKKDLAAVEYD---DDDVN---AAAEDSEDERPNRDTQEHVSSDIDSD 452
+GKK + E + D+D++ + +D D E + + +D
Sbjct: 411 AEKTGILDKLARGKKRMVFTEEELAHDNDIHIDESIVLKDKDAAGEADDLESQLNSMYAD 470
Query: 453 EERRKYDEQLEEVLDQA--------YENYVAKRGGSTMQRKRAKKAYAQED-----QLSE 499
++RK + QA + + + G + + +K Y +E+ S+
Sbjct: 471 FKQRKSERDARFKAKQARGGDNEDEWTGFTDSKNGEDEEDAKEEKDYIEEEDDDILSDSD 530
Query: 500 GDEDEDTMHTSYDSDKDQGDLDANPLMVPLDDGIRPTQEEITNKWFSQEIFAEAVQNGDL 559
DE + + + S+ D L + M+ D + ++ +K S +I +E+V GD
Sbjct: 531 DDEGINNLISKIKSESDGSKLSSQAKMLFSDPIFKNVTPDLPSK-PSTDISSESV--GDF 587
Query: 560 GKLGSE---DETQVDKQAEKHSIPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGA 616
KL + D+ + +++ EK +D +T+N E++ D++ +
Sbjct: 588 TKLSKKRKHDQVEKEEKEEKEVDSSDDDSSDDSDFEVVSNTYNHEDEIDSDYD------S 641
Query: 617 DSSDDSSSDESEDEEVDT-KAEILACAKKM-LRKKQREQILDDAYNRYMFDD-DGLPDWF 673
D + E +++D E + A ++ L +K + ++++ +NRY F D D LPDWF
Sbjct: 642 DEEKKQTEKEKHSKDIDIATVEAMTLAHQLALGQKTKHDLVNEGFNRYAFRDVDNLPDWF 701
Query: 674 LEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKAN 733
LE+E+ H + RP+TKE A+K + K ++ARP KKV EAKARKK ++ +LE+++KKA
Sbjct: 702 LEDEKEHSKINRPITKEAAMAIKEKIKALNARPIKKVLEAKARKKMRSVARLERIKKKAG 761
Query: 734 VISDQADISDRSKRKQIEQLYKSAVPK---RPKKEYVVAKKGVQVRAG-----KGKV-LV 784
+I+D D S++ K +I +L + K +PK VVA + AG KGK +V
Sbjct: 762 LINDNTDKSEKDKADEITKLMRKVSKKPVRKPKVTLVVASGKNRGLAGRPKGVKGKYKMV 821
Query: 785 DPRMKKDSR 793
D +K + R
Sbjct: 822 DGVLKNEHR 830
>gi|68491995|ref|XP_710224.1| potential rRNA methyltransferase [Candida albicans SC5314]
gi|73621935|sp|Q59KF3.1|SPB1_CANAL RecName: Full=AdoMet-dependent rRNA methyltransferase SPB1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|46431386|gb|EAK90959.1| potential rRNA methyltransferase [Candida albicans SC5314]
Length = 845
Score = 365 bits (936), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 272/811 (33%), Positives = 434/811 (53%), Gaps = 90/811 (11%)
Query: 1 MGKVKGKH---RLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGW 56
MGK + KH RLD+YY LAKE GYR+R+S+K++Q++ K+ FL S V+DLCAAPG W
Sbjct: 1 MGKQQKKHSKGRLDRYYYLAKEKGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSW 60
Query: 57 MQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
QVA Q P+ SL++G+D+VPI P+ ++ + DIT +CR+R++ M+ D VL
Sbjct: 61 CQVASQLCPINSLIIGVDIVPIKPLPNVITFQSDITTEDCRSRLRGHMKTWKA---DTVL 117
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
HDG+PNVG W Q+A +Q+ L + ++KLA + L GTFVTK+FRS+DY+++++ +QLF
Sbjct: 118 HDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLTAGGTFVTKIFRSRDYNNLMWVFQQLF 177
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ---GSVEPR-----KVV 228
EKVE KP ASR+ SAEI+++ +KAP K+DPRLLD K +F+ G E + K+
Sbjct: 178 EKVEATKPPASRNVSAEIFVVCKGFKAPKKLDPRLLDPKEVFEELGGGNESKQNNEAKIF 237
Query: 229 DVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSA---- 284
+ + + Q R R GY++GD TL DFI ++P+ LGS+ P
Sbjct: 238 NPEKFSSQ-RQRQGYQEGDYTLFHTMPIMDFIKQDDPINQLGSLNKFDLPAPKDDDNDDD 296
Query: 285 --------IKDHELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASA 336
+ +L T E+ DL+VLG+++FK +LK+R Q + +
Sbjct: 297 DHDHEWKILSKLKLCTPELLECIKDLKVLGRKEFKMILKFRKQARDILGIDKDEKEEEEE 356
Query: 337 SAPTEGENEEDADNRVLNEMEELKYAMDQRKKREKK----LLAKKRAKDKARKATGMQID 392
+ E E + + ++ E+++L Q+ KR KK L K+ +++ T M I
Sbjct: 357 NPKIEVEPLTE-EQKIDQELQDLINKQKQKAKRLKKNANELKQKEIIRNQMNMLTDMNIG 415
Query: 393 VMQDDYTDHELFSLSS----------IKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQ 442
+ LF+L + KGKK + ++D+++ ++D + D +
Sbjct: 416 IEAAQIGADSLFNLKTAEKTGQLDKLAKGKKKMI---FNDEEL------AKDNEIHIDEE 466
Query: 443 EHVSSDIDSDEERRKYDEQLEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQ-EDQLSEG- 500
E +D DS +E ++LE LD Y Y A++ RAK+A +D+ G
Sbjct: 467 EINDNDKDSADEL----DELENQLDDMYHQYQARKAERDANY-RAKQARGDADDEAWNGI 521
Query: 501 DEDEDTMHTSYDSDKDQGDLDANPLMVPL-----DDGIRPTQEEITNKWFSQEIFAEAVQ 555
+ED D + + D + + D + + L +G N + S IF E
Sbjct: 522 EEDNDDVESGKDYEMESESDDDDDEHIRLIAEKKSNG--SLSRTARNFFASDSIFNELSD 579
Query: 556 NGDLGKLGSEDETQVDKQAEKHSIPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPG 615
+ L ++ ++ + K E SI E+ ++ E E DFEIVP
Sbjct: 580 DVILEEIENKTKGSNGKMVE--SIQEQVANDNN------ENDDGDNDEEESDFEIVPNQK 631
Query: 616 ADSSDDSSSDESEDEEVDTKAEI--------LACAKKM-------LRKKQREQILDDAYN 660
+D DD S S+D+EV T + LA + M L +K + ++D+ N
Sbjct: 632 SDDDDDDESMNSDDDEVSTTTKSTTHQQKVDLATVEAMTLAHQVALGQKNKYDLIDEGIN 691
Query: 661 RYMF-DDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKR 719
RY F D D LPDWF+++E++H + I+P+TKE A+K + K+++ARP KKV EA++RKK
Sbjct: 692 RYSFRDKDNLPDWFIDDEKKHSKLIKPITKEAAIAIKEKQKQLNARPIKKVLEAQSRKKL 751
Query: 720 VAMRKLEKVRKKANVISDQADISDRSKRKQI 750
A+++LEK++KK+++I++ + S+R K +I
Sbjct: 752 RALKRLEKIKKKSDLINEDSGKSERDKADEI 782
>gi|448086080|ref|XP_004196015.1| Piso0_005455 [Millerozyma farinosa CBS 7064]
gi|359377437|emb|CCE85820.1| Piso0_005455 [Millerozyma farinosa CBS 7064]
Length = 814
Score = 363 bits (933), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 283/853 (33%), Positives = 447/853 (52%), Gaps = 110/853 (12%)
Query: 1 MGKVKGKH---RLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGW 56
MG+ + K+ RLD+YY LAKE GYR+R+++K++Q++ K+ FL S V+DLCAAPG W
Sbjct: 1 MGRTQKKNSKGRLDRYYHLAKEKGYRARSAFKVIQINEKYGHFLEKSKVVIDLCAAPGSW 60
Query: 57 MQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
QVA + PV SL++G+D+VPI P+ ++++ DIT +C+++++ M+ D VL
Sbjct: 61 CQVASKVCPVNSLIIGVDIVPIKPLPNCITVQADITTDDCKSKLRGYMKTWKA---DTVL 117
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
HDG+PNVG W Q+A +Q+ L + ++KLA L+ GTFVTK+FRS+DY+S+L+ +Q F
Sbjct: 118 HDGAPNVGLGWVQDAFTQSQLTLQALKLAVDNLSNGGTFVTKIFRSRDYNSLLWVFQQFF 177
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGT 234
++VE KP +SR+ SAEI+++ +KAP KIDPRLLD K +F+ G+ V
Sbjct: 178 DRVEATKPPSSRNVSAEIFVVCKGFKAPKKIDPRLLDPKEVFEELGTSTDNNEAKVFNPE 237
Query: 235 KQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSI---TFGDPACSAIKDHELT 291
K+KR RDGYE+GD TL DFI + P+++LGS + + D +K
Sbjct: 238 KKKRKRDGYEEGDYTLYHEVPVLDFIKCDEPIKLLGSTNKLLEPSKDDNEWKILKKIRAF 297
Query: 292 TEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEK-ATVPASASAPTEGENEEDADN 350
T E+ DL+VLGK++FK +LK+R ++ EK P S P D
Sbjct: 298 TPELLECMKDLKVLGKKEFKLILKFRKSAREILGLDEKDDEKPVVESEPLT------EDQ 351
Query: 351 RVLNEMEELKYAMDQRKKREKKLLAKKRAKDKAR----KATGMQIDVMQDDYTDHELFSL 406
++ E++E++ Q+ KR KK + + K+ R T M I + LF+L
Sbjct: 352 QIDQELKEMRDKQAQKLKRSKKHANEVKQKEIQRMQMNMLTDMNIGIDAAQNGSESLFNL 411
Query: 407 SSI----------KGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERR 456
+ KGK+ + D+D+ N D + SD S +E
Sbjct: 412 KTAAKTGELEKLSKGKRQMI---LKDNDIR-----------NNDVEIGYESDAASQDEL- 456
Query: 457 KYDEQLEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKD 516
+QLE LD Y++Y + +RA+ +++ GD+DE + D
Sbjct: 457 ---DQLETQLDSMYQSY---------KERRAENDAKFRSKIARGDDDEIPWNGIEPEADD 504
Query: 517 QG-DLDANPLMVPLDDGIRPTQEEITNK-----------WF-SQEIFAEAVQNGDLGKLG 563
+G + + D ITN+ +F S +IF E + L L
Sbjct: 505 EGEEFEKLSDDGSSDSDDDEHINRITNQTHQSLSRDAKTFFDSDKIFKELTDSDLLNNLV 564
Query: 564 SEDETQVDKQAEKHSIPEKAKQKMANDAAGPKSTHN---QVSEVEGDFEIVPAPGADSSD 620
+D+ + Q AN + ++ H + DFEIV A SD
Sbjct: 565 KKDDEKSASQ--------------ANSSDSAETVHKDNSSDDNSDSDFEIVQERSAHQSD 610
Query: 621 DS----------SSDESEDEEVDTKAEILACAKKMLRKKQREQILDDAYNRYMF-DDDGL 669
S++ +D E+ T + + L +K + ++++ NRY F D DGL
Sbjct: 611 SDSESEDDGMKKSNNHEKDVELATVEAMTLAHQVALGQKSKYDLVEEGINRYSFRDHDGL 670
Query: 670 PDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVR 729
PDWF+++E+RH + ++P+TKE AA+K + K+++ARP KKV EAK RKK A+++LEK++
Sbjct: 671 PDWFIDDEKRHSKLVKPITKEAAAAIKEKEKQLNARPIKKVLEAKGRKKIRALKRLEKLK 730
Query: 730 KKANVISDQADISDRSKRKQIEQLYKSAVPK---RPKKEYVVA---KKGVQVRAG--KGK 781
KK+++I++ + S+ K ++I++L K K +PK VVA +G++ R KGK
Sbjct: 731 KKSDLINEDSGKSESDKAQEIQKLMKKLSKKQNTKPKTTLVVANGSNRGLKGRPKGIKGK 790
Query: 782 V-LVDPRMKKDSR 793
+VD MKK+ R
Sbjct: 791 YKMVDGVMKKEQR 803
>gi|448081600|ref|XP_004194928.1| Piso0_005455 [Millerozyma farinosa CBS 7064]
gi|359376350|emb|CCE86932.1| Piso0_005455 [Millerozyma farinosa CBS 7064]
Length = 812
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 279/833 (33%), Positives = 450/833 (54%), Gaps = 72/833 (8%)
Query: 1 MGKVKGKH---RLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGW 56
MG+ + K+ RLD+YY LAKE GYR+R+++K++Q++ K+ FL S V+DLCAAPG W
Sbjct: 1 MGRTQKKNSKGRLDRYYHLAKEKGYRARSAFKIIQINEKYGHFLEKSKVVIDLCAAPGSW 60
Query: 57 MQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
QVA + PV SL++G+D+VPI P+ ++++ DIT +C+++++ M+ D VL
Sbjct: 61 CQVASKVCPVNSLIIGVDIVPIKPLPNCITIQADITTDDCKSKLRGYMKTWKA---DTVL 117
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
HDG+PNVG W Q+A +Q+ L + ++KLA L+ GTFVTK+FRS+DY+S+L+ +Q F
Sbjct: 118 HDGAPNVGLGWVQDAFTQSQLTLQALKLAVDNLSNGGTFVTKIFRSRDYNSLLWVFQQFF 177
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGT 234
++VE KP +SR+ SAEI+++ +KAP KIDPRLLD K +F+ G+ V
Sbjct: 178 DRVEATKPPSSRNVSAEIFVVCKGFKAPKKIDPRLLDPKEVFEELGASTDNSEAKVFNPE 237
Query: 235 KQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSI---TFGDPACSAIKDHELT 291
K+KR RDGYE+GD L DFI + P+++LGS + + D +K
Sbjct: 238 KKKRKRDGYEEGDYILYHEVPVLDFIKCDEPIKLLGSTNKLLEPSKDDNEWKILKKIRAF 297
Query: 292 TEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEK-ATVPASASAPTEGENEEDADN 350
T E+ DL+VLGK++FK +LK+R ++ EK P S P D
Sbjct: 298 TPELLECMKDLKVLGKKEFKLILKFRKSAREILGLDEKDDEKPVVESEPLT------EDQ 351
Query: 351 RVLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQD-----DYTDHELFS 405
++ E++E++ Q+ KR KK + + K+ R MQ++++ D D + S
Sbjct: 352 QIDQELKEMREKQAQKLKRSKKHANEIKQKEIQR----MQMNMLTDMNIGIDAAQNGSES 407
Query: 406 LSSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEV 465
L ++K +E D R N D + SD S +E +QLE
Sbjct: 408 LFNLKTAAKTGELEKLSKGKRQMILKDNDMR-NNDFDINYESDTASQDEL----DQLETQ 462
Query: 466 LDQAYENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDANPL 525
LD Y++Y +R + + R+K A +D++ + + + +K D ++
Sbjct: 463 LDSMYQSYKERRAENDA-KFRSKIARGDDDEIPWNGLEPEAEDEGEEFEKLSDDGSSDSD 521
Query: 526 MVPLDDGIRPTQEEITNK----WF-SQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIP 580
+ I + + ++ +F S +IF E + LG L +D
Sbjct: 522 DDEHINRITNQKHQSLSRDAKTFFDSDKIFKELNDSDLLGNLVKKD-------------V 568
Query: 581 EKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDDS----------SSDESEDE 630
EK+++ + + A + + DFEIV P A SD S++ D
Sbjct: 569 EKSQESLNDRAETVHKDDSSDDNSDSDFEIVQEPSAQESDSDSESEEGGMKKSNNHERDV 628
Query: 631 EVDTKAEILACAKKMLRKKQREQILDDAYNRYMF-DDDGLPDWFLEEERRHRQAIRPVTK 689
E+ T + + L +K + ++++ NRY F D DGLPDWF+++E+RH + ++P+TK
Sbjct: 629 ELATVEAMTLAHQVALGQKSKYDLVEEGINRYSFRDRDGLPDWFIDDEKRHSKLVKPITK 688
Query: 690 EEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQ 749
E AA+K + K+++ARP KKV EAK RKK A+++LEK++KK+++I++ + S+ K ++
Sbjct: 689 EAAAAIKEKEKQLNARPIKKVLEAKGRKKMRALKRLEKLKKKSDLINEDSSKSEGDKAQE 748
Query: 750 IEQLYKSAVPK---RPKKEYVVAK---KGVQVRAG--KGKV-LVDPRMKKDSR 793
I++L K K +PK VVAK +G++ R KGK +VD MKK+ R
Sbjct: 749 IQKLMKKLSKKQNTKPKTTLVVAKGSNRGLKGRPKGIKGKYKMVDGVMKKEQR 801
>gi|47225726|emb|CAG08069.1| unnamed protein product [Tetraodon nigroviridis]
Length = 842
Score = 361 bits (927), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 286/878 (32%), Positives = 447/878 (50%), Gaps = 144/878 (16%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R DK+Y LAKE GYRSR+S+KL+QL+ KF FL+ + A++DLCAAPGGW+QVA + +P
Sbjct: 8 GKTRRDKFYHLAKETGYRSRSSFKLIQLNRKFQFLQKARALVDLCAAPGGWLQVASKFMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V SL++G+DLVPI PI V+L++DIT +CR ++K ++ V D+VL+DG+PNVG
Sbjct: 68 VSSLIIGVDLVPIKPIPNVVTLQEDITTEKCRQALRKELQTWKV---DVVLNDGAPNVGA 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
W +A SQ L + ++KLA +FL GTFVTKVFRS+DY +++ +Q F KV+ KP
Sbjct: 125 NWQHDAFSQAHLTLMALKLACEFLTKGGTFVTKVFRSKDYQPLIWIFQQFFNKVQSTKPQ 184
Query: 186 ASRSASAEIYLLG-----------------------------IKYKAPAKIDPRLLDVKY 216
ASR+ SAEI+++ + + AP KID + D K+
Sbjct: 185 ASRNESAEIFVVCQGEWQSQVPISHEKKHFCVHFTHICIISLLGFLAPDKIDSKFFDPKH 244
Query: 217 LF-QGSVEPRKVVDVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSI 275
F + V+ + V +++ K K +GY DGD TL T F+ + NP++ L + I
Sbjct: 245 AFKEVDVQAKTVRELIPVKKPKA--EGYTDGDLTLFHSFPVTAFLKAENPVDFLAKASEI 302
Query: 276 TFGDPACSAIKDHELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPAS 335
+ ++ H TT E+K C D+RVLG+++ + LL WR ++++ S K
Sbjct: 303 ILDN---KDLESHASTTNEIKECCRDIRVLGRKELRLLLSWRSKLRRYLSKKLKMEAKGL 359
Query: 336 ASAPTEGENEE-DADNRVLNEMEELKYAMDQRKKREKKLLAKKRAKDKA----------- 383
+EE + D R + EE + +RK LA+ +A + A
Sbjct: 360 QDEINLSSDEEKEPDVREEKQEEEDEEEEMERK------LAELKATEVAELKRKKKKLLK 413
Query: 384 -----RKATGMQID---VMQDDYTDHELFSLSSIKGKKDLAAVEYDDDDVNAAAEDSEDE 435
R+ +++D V D D +FSLS+I +K +A + D D ED+
Sbjct: 414 ERRKQRERVALKMDLPGVSIADGGDSSMFSLSTINKQKVVADISKGDMQAADNLVDEEDD 473
Query: 436 RPNRDTQEHVSSDIDSDEERRKY-----DEQLEEVLDQAYENYVAKRGGSTMQRKRAKKA 490
H+S + D + ++ +E LEEV QR+ +
Sbjct: 474 L-------HISEEEDDEADKMSLASDLDEEDLEEV-----------------QRREKELE 509
Query: 491 YAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDANPLMVPLDDGIRPTQEEITNKWFSQEIF 550
+ +H + + DK++ + + L+V L+ G +E TN WFS+ IF
Sbjct: 510 KKTLKK---------KVHFTEEKDKEEDEEPESGLLVELE-GKDEKRERETNLWFSKGIF 559
Query: 551 AEAVQNGDLGKLGSEDETQVDK--QAEKHSIPEK--------AKQKMANDAAGPKSTHNQ 600
E D +E+E Q + Q + I EK +Q + A S +
Sbjct: 560 CEIDLEND-----AENELQQSEWLQNSQKEIVEKKVEAAPAEEEQAETSQKAADDSDSDS 614
Query: 601 VSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDT-------------KAEILACAKKMLR 647
+ + EI A ++ S + +DE+ AE LA ++
Sbjct: 615 DDSSDDEKEISRMKLAGGANGISGEAGDDEDFKVVPVESISKKMRILDAEGLALGSQIAT 674
Query: 648 KKQREQ-ILDDAYNRYMFDDDG--LPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDA 704
K+R + ++D +++R+ + +P+WFL++E++HR+ PVT+E + K ++KEI+A
Sbjct: 675 SKKRARDLMDGSFHRFSSSEQPWEVPEWFLQDEQKHRKKPVPVTREMVEEYKEKWKEINA 734
Query: 705 RPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKK 764
RP K+VAEAKARKKR ++K+E+ +KKA + + DIS+R K Q++ +YK A + K+
Sbjct: 735 RPIKRVAEAKARKKRRMLKKMEQAKKKAEAVVNTVDISEREKMAQLKSIYKKAGVGKEKR 794
Query: 765 E--YVVAKKGV--QVR-----AGKGKVLVDPRMKKDSR 793
E YVV KKG +VR G KV VD R+KKD R
Sbjct: 795 EVTYVVTKKGAGRKVRRPPGVKGAFKV-VDSRLKKDMR 831
>gi|424513744|emb|CCO66366.1| predicted protein [Bathycoccus prasinos]
Length = 1031
Score = 361 bits (926), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 247/636 (38%), Positives = 351/636 (55%), Gaps = 94/636 (14%)
Query: 1 MGK-VKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQV 59
MGK KGKHRLDK+Y LAKE G+R+R+++KLVQL+ K+ FL S+ A LDLCAAPGGW+QV
Sbjct: 1 MGKKAKGKHRLDKFYYLAKEQGFRARSAFKLVQLNRKYDFLSSAKACLDLCAAPGGWLQV 60
Query: 60 AVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDG 119
A + +P+ S ++G+DL I PIRG +L +DIT P CRA +K+V + G++ +D VLHDG
Sbjct: 61 AQKYMPMQSTIVGIDLASIKPIRGCTTLVEDITTPSCRAAIKRVTPD-GLK-YDCVLHDG 118
Query: 120 SPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKV 179
+PNVGG +A+EA SQ AL +D++KLAT+FL G FVTKVFRSQ+Y ++LY +QLF+KV
Sbjct: 119 APNVGGNYAKEAYSQAALTLDALKLATEFLTLDGWFVTKVFRSQEYHALLYAFQQLFKKV 178
Query: 180 EVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVV--------DVL 231
E KP ASR +SAEI+++ Y AP KIDPRLL +YLF +VE DVL
Sbjct: 179 ESTKPVASRDSSAEIFVVCKGYLAPTKIDPRLLKAEYLF-ANVEDGGQGNKGGQQNRDVL 237
Query: 232 RGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF----GDPACSAI-- 285
+ K KR+R GYEDG +L K + A +FI + P E+LG G + +
Sbjct: 238 KVEKAKRNRSGYEDGLHSLYKETYAENFITNEKPAEMLGMYHCFILDGGKGKKGTNVVPP 297
Query: 286 KDH-------ELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASA 338
KD E T EE++ L DL VL K DFK LLKWR+Q++K +K P + +
Sbjct: 298 KDGFMDLDACEETNEEIRTLFRDLGVLNKSDFKMLLKWRLQVRKRLGMEDKKVKPRTTTN 357
Query: 339 PTEGENE----------EDADNRVLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATG 388
E E + ED + R+L+EMEEL+ MD +R+KK AK + KD+ R G
Sbjct: 358 ANEDEEDENNENKAAVPEDENERLLSEMEELQGNMDAEARRKKKKQAKMKQKDRIRAQLG 417
Query: 389 MQIDVMQDDYTDHELFSLSSIKGKKDLAAVEYDDDDVNAAA----------EDSEDERPN 438
++ D + + +LFSL +K K+D+ V N AA DSE
Sbjct: 418 LKGD-GEAIVAEEDLFSLVRLKTKEDVDTV------ANQAAPSVPADYYEDSDSELNAAR 470
Query: 439 RDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENY---VAKRG--------GSTMQR-KR 486
R ++ S D D++ + +L+ LD Y+ Y K+G GS M+R KR
Sbjct: 471 RRQNQYDSEDSDAENDVENDTSRLDSSLDALYKQYKERQKKKGRSVGEGSKGSAMRRDKR 530
Query: 487 AKKAYAQEDQLSE-----------------GDEDEDTMHTSYDSDKDQGDLDAN------ 523
A + +L G E++D ++ ++D + N
Sbjct: 531 ATLEGEGDGELGSDDDEDVDESDESDSEETGFEEDDDAPLEWEKNEDVEGEEKNRKKKTK 590
Query: 524 ------PLMVPLDDG-IRPTQEEITNKWFSQEIFAE 552
L+V D ++P + ++WFS ++F+E
Sbjct: 591 EDKNKNNLIVEFDPSKVKPNSKATVDRWFSNDLFSE 626
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/199 (43%), Positives = 123/199 (61%), Gaps = 20/199 (10%)
Query: 606 GDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQREQILDDAYNRYMFD 665
G + V A G+DS + + DE D +AEILA +KKMLR+KQRE+I++DAYNRY F+
Sbjct: 802 GSRQRVRADGSDSDESTDVDELSD---GARAEILAISKKMLRRKQREEIIEDAYNRYAFE 858
Query: 666 DD--GLPDWFLEEERRHRQAIRPV-----TKEEIAAMKAQFKEIDARPAKKVAEAKARKK 718
DD LPDWF+++ERR +A P+ +E +A++ + +D R KKVAEAK RKK
Sbjct: 859 DDPRDLPDWFVDDERRFMKA-EPIYDQSDYEEALASVSIK---VDERSIKKVAEAKLRKK 914
Query: 719 RVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLY----KSAVPKRPKKEYVVAKKGVQ 774
+ A K+ + R++A I DQ DI D SK ++IE +Y K A ++ + ++VVA+K +
Sbjct: 915 KRAKDKMSEARQRAGAIMDQDDIPDVSKVREIEAIYAKANKLANGRKKQIKHVVARKMHK 974
Query: 775 VRAGKGKVLVDPRMKKDSR 793
AG VD RM D R
Sbjct: 975 GNAGGPS--VDKRMLADRR 991
>gi|126138018|ref|XP_001385532.1| AdoMet-dependent rRNA methyltransferase SPB1 (2'-O-ribose RNA
methyltransferase) (S-adenosyl-L-methionine-dependent
methyltransferase) [Scheffersomyces stipitis CBS 6054]
gi|126092810|gb|ABN67503.1| AdoMet-dependent rRNA methyltransferase SPB1 (2'-O-ribose RNA
methyltransferase) (S-adenosyl-L-methionine-dependent
methyltransferase) [Scheffersomyces stipitis CBS 6054]
Length = 831
Score = 359 bits (921), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 267/807 (33%), Positives = 419/807 (51%), Gaps = 96/807 (11%)
Query: 1 MGKVKGKH---RLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGW 56
MGK + K+ RLD+YY LAKE GYR+R+S+K++Q++ K+ FL S V+DLCAAPG W
Sbjct: 1 MGKTQKKNSKGRLDRYYYLAKEKGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSW 60
Query: 57 MQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
QVA Q P+ SL++G+D+VPI P+ ++ + DIT +CR+R++ M+ D VL
Sbjct: 61 CQVASQLCPINSLIIGVDIVPIKPLPNCITFQSDITTEDCRSRLRGHMKTWKA---DTVL 117
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
HDG+PNVG W Q+A +Q+ L + ++KLA + LA GTFVTK+FRS+DY+++++ +QLF
Sbjct: 118 HDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLAAGGTFVTKIFRSRDYNNLMWVFQQLF 177
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGT 234
+KVE KP ASR+ SAEI+++ +KAP K+DPRLLD K +F+ + + R
Sbjct: 178 DKVEATKPPASRTVSAEIFVVCKGFKAPKKLDPRLLDPKEVFEELAAGPENSEAKIFRPE 237
Query: 235 KQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSI---TFGDPACSAIKDHELT 291
K+ RHR GYE+GD L +FI S +P+ +L S + + D +K
Sbjct: 238 KKTRHRTGYEEGDYLLYHEIPILEFIRSEDPITLLSSNNKLVEPSKEDHEWKILKKLRHC 297
Query: 292 TEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNR 351
T E+ DL+VLG+++FK +LK+R + + +K + S E EE +
Sbjct: 298 TPELLECIKDLKVLGRKEFKLILKFRKEARDLLGLEDKEDLNKSDLVEVEPLTEE---QQ 354
Query: 352 VLNEMEELKYAMDQRKKREKKLLAKKRAKDKARK----ATGMQIDVMQDDYTDHELFSLS 407
+ E+EEL Q+ KR KK + + K+ R T M I + LF+L
Sbjct: 355 IDKELEELSSKQKQKAKRAKKNANESKQKEIVRNQMNMLTDMNIGIEAAQIGSESLFNLK 414
Query: 408 S----------IKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRK 457
+ KGKK + ++D+++ + DE E+V++D + DE
Sbjct: 415 TAEKTGQLDKLAKGKKRMV---FNDEEIAKGNDIHVDE-----DAENVATDDELDE---- 462
Query: 458 YDEQLEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQEDQ-----LSEGDEDEDT------ 506
LE LD Y +Y +R RAKKA D + DEDED
Sbjct: 463 ----LEAQLDDMYNSY-QERKAERDANYRAKKARGDVDDEAWDGIRSEDEDEDANLEERD 517
Query: 507 --------------MHTSYDSDKDQGDLDANPLMVPLDDGIRPTQEEITNKWFSQEIFAE 552
H +DK + L N + D I E+T+ +EI
Sbjct: 518 YEMDSESESDSDDDEHIRLIADKKKEGLSKNAKVFFASDSIFG---ELTDDTLLKEI--- 571
Query: 553 AVQNGDL-GKLGSEDETQVDKQAEKHSIPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIV 611
+N L + S ++ K + + + + EVE D
Sbjct: 572 --ENKKLSSNVSSNGSARIFKSQDGQESEDSEDSESDESDFEIMPAEKEHEEVEDD---- 625
Query: 612 PAPGADSSDDS-----SSDESEDEEVD-TKAEILACAKKM-LRKKQREQILDDAYNRYMF 664
+DS +S S +S+ + +D E + A ++ L +K + ++D+ NR F
Sbjct: 626 ----SDSEQESIARQYSRAKSQQQRIDLATVEAMTLAHQVALGQKNKHDLIDEGINRNSF 681
Query: 665 DD-DGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMR 723
D D LP+WF+++E+RH + I+P+TKE A+K + K+++ARP KKV EA+ RKK A+R
Sbjct: 682 RDVDNLPEWFIDDEKRHSKIIKPITKEAAMAIKEKQKQLNARPIKKVLEAQGRKKMRALR 741
Query: 724 KLEKVRKKANVISDQADISDRSKRKQI 750
+LEK++KK+++I++ + S+R K ++I
Sbjct: 742 RLEKLKKKSDLINEDSGKSERDKAEEI 768
>gi|344300277|gb|EGW30617.1| hypothetical protein SPAPADRAFT_157880 [Spathaspora passalidarum
NRRL Y-27907]
Length = 807
Score = 358 bits (920), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 257/783 (32%), Positives = 415/783 (53%), Gaps = 72/783 (9%)
Query: 1 MGKVKGKH---RLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGW 56
MGK + K+ RLD+YY LAKE GYR+R+S+K++Q++ KF FL S V+DLC APG W
Sbjct: 1 MGKTQKKNSKGRLDRYYYLAKEKGYRARSSFKIIQINEKFGHFLEKSKVVVDLCCAPGSW 60
Query: 57 MQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
QVA Q PV SL++G+D+VPI P+ ++ + DIT +CR++++ ++ V D V+
Sbjct: 61 CQVASQLCPVNSLIVGVDIVPIKPMPNVITFQSDITTEDCRSKLRGYLKTFKV---DTVM 117
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
HDG+PNVG W Q+A +Q+ L + +++LA + LAP G F+TK+FRS+DY+++L+ +QLF
Sbjct: 118 HDGAPNVGLGWVQDAFTQSQLTLQALRLAVEHLAPNGNFITKIFRSRDYNNLLWVFQQLF 177
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGT 234
EKVE KP ASR+ SAEI+++ +KAP K+DPRLLD K +F+ VE V
Sbjct: 178 EKVEATKPPASRNVSAEIFVVCKGFKAPKKLDPRLLDPKEVFEEIDRVETNNEAKVFNPE 237
Query: 235 KQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF--GDPACSAIKDHELTT 292
K+ RHR GYE+GD TL +FI +P+ LG + + D + T
Sbjct: 238 KKTRHRTGYEEGDYTLYHTMPILEFIKDEDPINQLGRLNKLEVPTDDHEWKVVSKLRSCT 297
Query: 293 EEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVP--ASASAPTEGENEEDADN 350
E+ DL+ LG+++FK +LK+R Q ++ + +P E E+ D
Sbjct: 298 PELLECLKDLKTLGRKEFKLILKFRKQARELL----QLDLPEEKPEIEVEELTEEQKIDK 353
Query: 351 RVLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSS-- 408
+ M++ K + KK+ +L K+ +++ T M I + + LF+L +
Sbjct: 354 ELQELMDKQKQKQKRLKKQANELKQKEIVRNQMNMITDMNIGIEASNIGAESLFNLKTAE 413
Query: 409 --------IKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDE 460
KGKK + E + N D E E DI+S +E
Sbjct: 414 KTGQLDKLAKGKKRMVFTEQELAKDNEIHIDEEAE------------DINSADE------ 455
Query: 461 QLEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDL 520
LE L+ Y+NY A++ + RAKK ++ D++ + + + D + ++
Sbjct: 456 -LENQLEDMYQNYQARKAEKDVNY-RAKKLRENDEPWDGIDDEPEEVESENDYEMEEDSE 513
Query: 521 DANPLMVPLDDGI--RPTQEEITN--KWFSQE-IFAEAVQNGDLGKLGSEDETQVDKQAE 575
+ ++ I R E N +FS + IF E + L ++ ET + +
Sbjct: 514 SDSDDDEQINKIIEARKANELSKNAKAFFSSDSIFKELGDDALLEEMTKPTETNGSTKPQ 573
Query: 576 KHSIPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEE---- 631
P+K Q + + DFE+VP +D D S E++ +
Sbjct: 574 ----PQKPVQPAD-------DSSDSSDSENDDFEVVPNEESDYDDSDSDTETKTKTHQKN 622
Query: 632 ---VDTKAEILACAKKMLRKKQREQILDDAYNRYMF-DDDGLPDWFLEEERRHRQAIRPV 687
V +A LA + L + + ++++ ++RY F D D LPDWFL++E +H + I+P+
Sbjct: 623 LDLVTVEAMTLA-HQVALGQMNKNDLVNEGFHRYSFRDKDNLPDWFLDDENKHSKLIKPI 681
Query: 688 TKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKR 747
TKE A+K + K+++ARP KKV EA+ RKK A+R+LEK++KK+++I++ + S+R K
Sbjct: 682 TKEAAMAIKEKQKQLNARPIKKVLEAQGRKKMRALRRLEKLKKKSDLINEDSGKSERDKA 741
Query: 748 KQI 750
++I
Sbjct: 742 EEI 744
>gi|320582207|gb|EFW96425.1| rRNA methyltransferase, putative [Ogataea parapolymorpha DL-1]
Length = 824
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 258/780 (33%), Positives = 409/780 (52%), Gaps = 54/780 (6%)
Query: 3 KVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGWMQVAV 61
K K RLD+YY LAKE GYR+R+S+K++Q++ K+ FL S V+DLCAAPG W QVA
Sbjct: 6 KKNAKGRLDRYYHLAKEKGYRARSSFKILQINQKYGHFLEKSKVVIDLCAAPGSWCQVAA 65
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
Q PV SL++G+D+VPI PI ++ + DIT +C+++++ ++ D VLHDG+P
Sbjct: 66 QLCPVNSLIVGVDIVPIKPIPNCITFQSDITTEDCKSKLRGHLKTWKA---DTVLHDGAP 122
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG W Q+A +Q+ L + +++LA + LA GTFVTKVFRS+DY+++++ +QLF+KVE
Sbjct: 123 NVGLNWVQDAYTQSHLTLQALRLAVEHLAAGGTFVTKVFRSRDYNNLVWVFRQLFDKVEA 182
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF----QGSVEPRKVVDVLRGTKQK 237
KP ASR+ SAEI+++ +KAP K+DPRLLD K +F +G V V +K
Sbjct: 183 TKPPASRNVSAEIFVVCKGFKAPKKLDPRLLDPKEVFEELPEGPVNNE--AKVFNPEVKK 240
Query: 238 RHRDGYEDGDTTLRKVSLATDFI-WSNNPLEILGSVTSITFGDPA--CSAIKDHELTTEE 294
R RDGY++GD TL D++ + + LGSV+ + + ++ + TT E
Sbjct: 241 RKRDGYDEGDYTLFHPMALLDWVRQEEDVINTLGSVSKFEIDENSDEWKLLRRMKDTTPE 300
Query: 295 VKALCDDLRVLGKQDFKHLLKWRMQIKKAFS-SAEKATVPASASAPTEGENEEDADNRVL 353
C DL+VLGK+DF+ L+KWR + EK TE + ++
Sbjct: 301 FLECCKDLKVLGKKDFRMLIKWRKHARLVLDLDDEKEEKQIEVEELTE-------EQKID 353
Query: 354 NEMEELKYAMDQRKKREKKLLAKKRAKDKAR----KATGMQIDVMQDDYTDHELFSLSSI 409
E+EE+K + ++KREK+ + R ++ R T MQI + LF+L
Sbjct: 354 QEIEEMKEKIRLKQKREKRRKNEARQQEIQRMQMNMLTDMQIGIDAGQIGSESLFNLKLA 413
Query: 410 KGKKDLAAVEYDDDDVNAAAED-SEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQ 468
+ L + + ED D D + V S + D LE+ L+
Sbjct: 414 EKTGQLNELARGKKSMVFTGEDLIRDNDIVVDEHQAVESGDELD--------NLEDQLNS 465
Query: 469 AYENYVAKRGGSTMQRK---RAKKAYAQEDQLSEGDEDEDT---------MHTSYDSDKD 516
Y+ Y + M+R RAK A +D+ EG ED + S
Sbjct: 466 MYQQYKE----AKMERDAKLRAKAARGGDDEEWEGIEDRQSEVDSDEAVEESESESDIDS 521
Query: 517 QGDLDANPLMVPLDDGIRPTQEEITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEK 576
D N L+ ++ + + + +F IF E V+ + E+ + AE+
Sbjct: 522 DDDEAINKLIATIEKKKKGGLSKTASNFFGDSIF-EGVEEVSADNEKPQQESAKQEFAEQ 580
Query: 577 HSIPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVD-TK 635
+ A + +++ + E E + E P + S +EVD
Sbjct: 581 AVSEQPASKSSESESESESESDASELESESESESETEPDFELVSGSGDSLPHKQEVDLAT 640
Query: 636 AEILACAKKM-LRKKQREQILDDAYNRYMF-DDDGLPDWFLEEERRHRQAIRPVTKEEIA 693
E + A+++ L +K ++ ++DD +N+Y F + +GLPDWFLE+E +H + RP+TKE
Sbjct: 641 VEAMTLAQQLALGQKSKKDLIDDGFNKYSFREKEGLPDWFLEDEEKHSKINRPITKEAAL 700
Query: 694 AMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQL 753
A+K + K+++ARP KKV EA RKK A+++LEK++KK+++I++ S+ K K+I+ L
Sbjct: 701 ALKEKMKQLNARPIKKVMEAVGRKKLRAIKRLEKIKKKSDLIAEDDSKSELDKAKEIQAL 760
>gi|452825505|gb|EME32501.1| FtsJ-like methyltransferase family protein [Galdieria sulphuraria]
Length = 735
Score = 353 bits (905), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 261/795 (32%), Positives = 402/795 (50%), Gaps = 112/795 (14%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDKYY LAKE GYRSRA++KL+QL+ K+ L S+ AV+DLCAAPGGW+QVA + P
Sbjct: 7 GKRRLDKYYHLAKEQGYRSRAAFKLIQLNRKYDLLGSARAVVDLCAAPGGWLQVARKETP 66
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
+ + +G+D+VPI PI G L DITK C ++K +E G R D++L DGSP++G
Sbjct: 67 IACVCVGVDIVPIRPIPGTTCLTHDITKESCIGAIRKALE--GTRP-DVILCDGSPSMGT 123
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A +Q+ L + +++L+ L+P G+FV KVFRS +Y+S+LY + QLF KV KP
Sbjct: 124 AWLQDAYTQSELTLAALRLSVSLLSPNGSFVAKVFRSSEYTSLLYVMNQLFGKVFSTKPQ 183
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVE---PRKVVDVLRGTKQKRHRDG 242
ASR+ SAEIY++ K+K KID +LLD + +F+ E +K ++ ++KR+R G
Sbjct: 184 ASRAESAEIYVICTKFKDMKKIDQKLLDPRTVFKEQDEQSKTKKSNRLIFPHQKKRNRLG 243
Query: 243 Y--EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPA-CSAIKDHELTTEEVKALC 299
Y E+G RK S+ DFI S+ P+ IL + + FG+ IK +T+ +V C
Sbjct: 244 YDEENGTNLFRKCSV-LDFIKSSQPIHILNNTHVLEFGEEGQAQYIKSLAITSADVLENC 302
Query: 300 DDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEEL 359
DL+VLG +D + LL WR + K +K+ ++ D D+ V ++ +
Sbjct: 303 KDLQVLGPKDQRRLLHWRKAVLKELDKNKKSPEESNEEENLP----RDEDSTVSSDFDIE 358
Query: 360 KYAMDQRKK----REKKLLAKKRAKDKARKATG-MQIDVMQDDYTDHELFSLSSIKGKKD 414
K + +++K ++KK L K + K TG + + D T+ LFSL ++ +
Sbjct: 359 KKQISKQEKDSLRKQKKALLKLSKRQKRMLETGELYSSNLADSMTESNLFSLPNLTHSLE 418
Query: 415 LAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENYV 474
N A ED + R N +T+E I D ++ KY
Sbjct: 419 -----------NLAEEDLK-VRDNDETEE-----IQKDNKKEKY---------------- 445
Query: 475 AKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTS-YDSDKDQGDLDANPLMVPLDDGI 533
+Y+ ED LS +E+ D H + KD L++ ++ D
Sbjct: 446 --------------VSYSGEDYLSYLNEEVDQWHQQRLEKRKDSSTLESVNVV---KDAN 488
Query: 534 RPTQEEITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKMANDAAG 593
E ITN+W+S +F + + G+ G+ + D+ + + K +
Sbjct: 489 TSNTEHITNRWYSHPLFTDEL-TGEEGQSNALDKRENSYKQSKQDV-------------- 533
Query: 594 PKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQREQ 653
H S DD KA LA A M+RKK R++
Sbjct: 534 ----HEDDETSSSSESSDEEEDELSMDD-------------KARALALASNMIRKKSRQE 576
Query: 654 ILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPA----KK 709
++DDA+NR++FDD+ P WFLEEE+++R+A ++E + +KA ++ R A KK
Sbjct: 577 LMDDAWNRHVFDDEYAPKWFLEEEKKYRRASLVTSEERVEEIKAA---LEGRYAQYLNKK 633
Query: 710 VAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKEYVVA 769
EA RKKR RKL ++ + + Q ++S K K I+ + K + K V
Sbjct: 634 EQEALWRKKRKESRKLRRLDAEIERVQSQTELSKEEKDKSIQNILKRVRKNKKNKRQVAY 693
Query: 770 KKGVQVRAGKGKVLV 784
+R G GK++V
Sbjct: 694 ---AVLRPGGGKMIV 705
>gi|84997481|ref|XP_953462.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65304458|emb|CAI76837.1| hypothetical protein, conserved [Theileria annulata]
Length = 920
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 283/936 (30%), Positives = 441/936 (47%), Gaps = 187/936 (19%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK+RLDKYY LAKEHGYRSR+++K++QL KF+ ++ + ++DLCAAPGGW+QVA ++P
Sbjct: 8 GKNRLDKYYHLAKEHGYRSRSAFKIIQLSKKFNIFQNCNVLVDLCAAPGGWLQVASNQLP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V S ++G+DLVPI PI+G + + DI P+C + + + V D+VLHDGSPN+G
Sbjct: 68 VSSTIIGVDLVPIKPIKGVTTFQADIRTPKCLSLITNHLNGMNV---DVVLHDGSPNMGC 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
W +A +QN LV+ + K+A L G FVTKVFRS DY+S+++ L F+KV+V KP
Sbjct: 125 NWNLDAFNQNVLVLTACKMACSLLRKGGIFVTKVFRSSDYNSLVWMLSNCFDKVKVTKPQ 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEP--------------------- 224
+SR+ SAEI+ + I +K ID RL + Y+FQ S P
Sbjct: 185 SSRNVSAEIFAVCIGFKTLKLIDQRLFNPDYVFQNSDVPIEQNELSQSNKLLSNTPKSLS 244
Query: 225 ----------------RKVVDVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEI 268
K ++ L ++K +R+GYE ++S+ DF+ S P I
Sbjct: 245 NTPKTLTHTSKTPNHVSKTLNQLLKEQKKINREGYEGP--IYSEISVI-DFLKSKEPAVI 301
Query: 269 LGSVTSITFGDPACSAI-------------KDHELTTEEVKALCDDLRVLGKQDFKHLLK 315
L + + F + I K++ LTTEE+K LC DL+V GK D + LLK
Sbjct: 302 LVTYNKLLFTTTNSNTIGTKSTDEEILEMVKENPLTTEEIKLLCSDLKVAGKSDLQSLLK 361
Query: 316 WRMQIKKAFSSAEKATVPASASAPTEGENE-------------EDADNRVLNEMEELKYA 362
WR ++ + + + P+ ++ P +E A + V + ++
Sbjct: 362 WRFKLINTIPNLKTKSNPSDSTKPGIDGSEPTISDTTVSTTTDPTAMDTVDSTIDSTVIE 421
Query: 363 MDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYT-----DHELFSLSSIKGKKDLAA 417
MD KK + K+ ++KR ++ ++ ++ + ++ + D +LFSL+S + A
Sbjct: 422 MD--KKIKNKIESEKRRLERKQRKMLKKLKIGKNSNSSLITPDPDLFSLNSSNLQSYPEA 479
Query: 418 V----EYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEE--------- 464
+ E ++ D+ + D E E D + + +DI+S E D QL +
Sbjct: 480 LPDGSESEETDIESKETDPESEE--TDVESQLPADIES--EDTVIDSQLTDIESDIATEI 535
Query: 465 ------VLDQAYENYVAKR------------------GGSTMQRKRAKKAYAQEDQLSE- 499
V E+Y KR +T K ++K A+ +Q +E
Sbjct: 536 ESEDTVVESDELEDYEMKRLMNMEIDLEVRHSIDKINEQNTKHVKLSRKQKAKLEQSNEL 595
Query: 500 ---------------------GDEDEDTMHTSYDSDKDQGDLDA-NPLMVPLDDGIRPTQ 537
D + D + DS+ DQGD D P D +
Sbjct: 596 KNFINKLQYEAQIHHMNQSDHSDTEPDVNYEQGDSNSDQGDSDIETPHRDIKQDDLNGNL 655
Query: 538 EE--ITNKWFSQEIFAEAVQNGDLGKLGSE----DETQVDKQAEKHSIPEKAKQKMANDA 591
+E I+ +WF +IF + K + ++ K +E+ +P K+K+ M
Sbjct: 656 DEDLISKRWFDNDIFKLNLHTNHSTKQPKPPKQVEHPKLSKLSEQPELPNKSKENM---- 711
Query: 592 AGPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQR 651
D +IVPA ++ D V+ AEI A M+ KK R
Sbjct: 712 ---------------DIKIVPAISNSEKEEIMGD------VNKLAEIQALGSLMINKKTR 750
Query: 652 EQILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVA 711
++D AYN+ F D+ LP WF+E+E +H + PVTKE + KA+ E+ RP KKV
Sbjct: 751 MALIDGAYNKRTFTDEDLPSWFVEDENKHNKPQYPVTKELMKKYKAKLLELKNRPIKKVL 810
Query: 712 EAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKEYVVAKK 771
EAK RK A +KL+ + K IS+ + S + K + L K KR +K YV++++
Sbjct: 811 EAKHRKALRAKKKLKSILPKIEAISNDRE-STENPNKLLRGLKKIQSTKR-QKVYVISRR 868
Query: 772 GVQVRAGKG------------KVL--VDPRMKKDSR 793
+ KG KVL VD RMK+D+R
Sbjct: 869 SNFNKLTKGGKQKSNKSKGSRKVLKHVDRRMKQDNR 904
>gi|190347121|gb|EDK39337.2| hypothetical protein PGUG_03435 [Meyerozyma guilliermondii ATCC
6260]
Length = 819
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 270/848 (31%), Positives = 449/848 (52%), Gaps = 95/848 (11%)
Query: 1 MGKVKGKH---RLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGW 56
MGK + K+ RLDKYY LAKE GYR+R+S+K++Q++ K+ FL S V+DLCAAPG W
Sbjct: 1 MGKTQKKNSKGRLDKYYFLAKEKGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSW 60
Query: 57 MQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
QVA P+ SL++G+D+VPI P+ ++ + DIT +CR+R++ M+ D VL
Sbjct: 61 CQVASNLCPINSLIIGVDIVPIKPLPNCITFQSDITTEDCRSRLRGHMKTWKA---DTVL 117
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
HDG+PNVG W Q+A +Q+ L + ++KLA + L GTFVTK+FRS+DY+++++ +QLF
Sbjct: 118 HDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLTLGGTFVTKIFRSRDYNNLMWVFQQLF 177
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVE-PRKV-VDVLRGT 234
EKVE KP ASR+ SAEI+++ +KAP K+DPRLLD K +F+ + P+ +
Sbjct: 178 EKVEATKPPASRNVSAEIFVVCKGFKAPKKLDPRLLDPKEVFEELADGPQNNEAKIYNPE 237
Query: 235 KQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDP---ACSAIKDHELT 291
K+ R R GYE+GD L DFI +P+ L ++ +T D +K +
Sbjct: 238 KKVRRRQGYEEGDYLLYHELPILDFIKDEDPINTLATLNKLTMPDKDNHEWKIVKKLKSY 297
Query: 292 TEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNR 351
T E+ DL+VLGK++FKH+LK+R Q ++ VP E E E D +
Sbjct: 298 TPELVECFTDLKVLGKKEFKHILKFRKQARELLG----LDVPEETKPEIEVE-ELTEDQK 352
Query: 352 VLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQD--------DYTDHEL 403
+ E++ AM ++++++ K + K + K ++ MQ++++ D L
Sbjct: 353 IDKELQ----AMTEKQRQKAKRIKKNANELKQKEIQRMQMNMLTDMNVGIDAAKIGSESL 408
Query: 404 FSLSSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDI--DSDEERRKYDEQ 461
F+LS+ + +L + + + +E +D +V D +SD+E + Q
Sbjct: 409 FNLSTAEKTGELDKLAKGKRQMIFS-----NEEIIKDNDIYVDEDAPQESDDELDALEAQ 463
Query: 462 LEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLD 521
L+++ AY+N A+R ++R GD+D++ SDK++ D++
Sbjct: 464 LDDMY-SAYQNRKAERDAKFRAKQR------------RGDDDDEPWE-GLQSDKEESDVE 509
Query: 522 AN----------------PLMVPLDDGIRPTQEEITNKWFSQEIFAEAVQNGDLGKLGSE 565
++ + ++ + S IF L ++G+
Sbjct: 510 MADNDDDHSSDSDDDEHISTLIAEQKAKNGLSRQASSFFASDPIFNAFDDEELLAEMGN- 568
Query: 566 DETQVDKQAEKHSIPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDD---- 621
DE++ + K P ++ K D++ SE + FEIV + D D
Sbjct: 569 DESKRGASSTKPQEPAVSETKDIADSSD--------SEDDQGFEIVKSNNDDDEIDISSS 620
Query: 622 ------SSSDESEDEEVDTKAEILACAKKMLRKKQREQILDDAYNRYMF-DDDGLPDWFL 674
S + S D ++ T + + L +K + ++++ N+Y F D +GLPDWF+
Sbjct: 621 SDEESGSKKNHSWDIDLATVEAMTMAHQLALGQKSKNDLVNEGINKYSFRDHEGLPDWFV 680
Query: 675 EEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANV 734
+EE++H + + +TKE AA+K + K+++ARP KKV EA+ RKK A+++LEK++KK+++
Sbjct: 681 DEEKKHSKITKSITKEAAAAIKEKQKQLNARPIKKVLEAQGRKKMRALKRLEKLKKKSDL 740
Query: 735 ISDQADISDRSKRKQIEQLYKSAV---PKRPKKEYVVAK---KGVQVRAG--KGKV-LVD 785
I++ + S+ K +I++L + KRPK VVA+ KG+ R KGK +VD
Sbjct: 741 INEDSAKSEADKADEIQKLMRKMTKKQTKRPKATVVVARGSNKGLSGRPKGIKGKYKMVD 800
Query: 786 PRMKKDSR 793
+K + R
Sbjct: 801 GVLKNEQR 808
>gi|294657864|ref|XP_460162.2| DEHA2E19690p [Debaryomyces hansenii CBS767]
gi|218511801|sp|Q6BNQ8.2|SPB1_DEBHA RecName: Full=AdoMet-dependent rRNA methyltransferase SPB1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|199433005|emb|CAG88435.2| DEHA2E19690p [Debaryomyces hansenii CBS767]
Length = 831
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 259/799 (32%), Positives = 426/799 (53%), Gaps = 80/799 (10%)
Query: 1 MGKVKGKH---RLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGW 56
MGK + K+ RLD+YY LAKE GYR+R+S+K++Q++ K+ FL S V+DLCAAPG W
Sbjct: 1 MGKTQKKNSKGRLDRYYYLAKEKGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSW 60
Query: 57 MQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
QVA Q P+ SL++G+D+VPI + ++ + DIT +CR++++ M+ D VL
Sbjct: 61 CQVASQLCPINSLIIGVDIVPIKALPNCITFQSDITTEDCRSQLRGHMKTWKA---DTVL 117
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
HDG+PNVG W Q+A +Q+ L + ++KLA + L GTFVTK+FRS+DY+++++ +QLF
Sbjct: 118 HDGAPNVGLGWVQDAFTQSHLTLQALKLAVENLNTGGTFVTKIFRSRDYNNLMWVFQQLF 177
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGT 234
EKVE KP ASR+ SAEI+++ YK+P K+DPRLLD + +F+ + +
Sbjct: 178 EKVEATKPPASRNVSAEIFVVCKGYKSPKKMDPRLLDPREVFEELPTGPDNNEAKIFNPE 237
Query: 235 KQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSIT---FGDPACSAIKDHELT 291
K+ R R GYE+GD TL +FI + +P+ LG++ ++ D +K +L
Sbjct: 238 KKVRRRQGYEEGDYTLFHEMPLLEFIKNEDPINTLGTLNKLSEPPQDDHEWKILKKSKLC 297
Query: 292 TEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFS-SAEKATVPASASAPTEGENEEDADN 350
T E+ DL+VLG++DFKHLLK+R Q + A++ T TE D
Sbjct: 298 TPELLECIKDLKVLGRKDFKHLLKFRKQARDLLGLDAKEETQEIEVEPLTE-------DQ 350
Query: 351 RVLNEMEEL----KYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSL 406
++ E++EL K + KK+ ++ K+ + + T M I + LF+L
Sbjct: 351 QIEKELQELTEKQKQKARKAKKQSNEIKQKEIQRSQMNMLTDMNIGIEAAQIGAESLFNL 410
Query: 407 SSI----------KGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERR 456
+ KGKK + ++D+++ + + DE + ++++ +
Sbjct: 411 KTAIKTGQLEKLSKGKKKMI---FNDEEIMKDNDINFDEEADANSEDEI----------- 456
Query: 457 KYDEQLEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKD 516
++LE LD Y +Y +R RAKK D EG E ++ D + +
Sbjct: 457 ---DELEAQLDDMYNSYQNRRAERDANY-RAKKLRGDVD--DEGWEGIESDKEGSDKETE 510
Query: 517 QGDLDANPLMVPLDDGIRPTQEEITNKWFSQEIFAEAVQNGDLGKLGSED--ETQVDKQA 574
D + DD + K S+ N G+LG E E K+A
Sbjct: 511 ANDYEMESESDSDDDEHIQRIADQRKKELSKNAKVFFASNSIFGELGDEALLEEMNKKEA 570
Query: 575 EKHSIPEKAKQKMANDAAG--------PKSTHNQVSEVEGDFEIVP-APGADSSDDSSSD 625
+ + + + AND + + N VS+ + DFEIVP AP + SD S +
Sbjct: 571 KTNQVTNENAVGHANDISNKPEQMEVDSSDSENDVSD-DSDFEIVPNAPDEELSDSDSDN 629
Query: 626 ESEDEEVDTKA------------EILACAKKM-LRKKQREQILDDAYNRYMF-DDDGLPD 671
E++ +KA E + A ++ L K + ++++ ++Y F D D LP+
Sbjct: 630 ENDVSRKYSKAKDQQSKVDIATVEAMTLAHQVALGHKNKHDLVNEGIHKYSFRDHDDLPE 689
Query: 672 WFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKK 731
WF+++E+R+ + ++P+TKE A+K + K+++ARP KKV EA+ RKK A+++LEK++KK
Sbjct: 690 WFVDDEKRNSKIVKPITKEAALAIKEKQKQLNARPIKKVLEAQGRKKLRALKRLEKLKKK 749
Query: 732 ANVISDQADISDRSKRKQI 750
+++I++ + S+R K +I
Sbjct: 750 SDMINEDSAKSERDKADEI 768
>gi|70997385|ref|XP_753441.1| rRNA methyltransferase Spb1 [Aspergillus fumigatus Af293]
gi|73621934|sp|Q4WVH3.1|SPB1_ASPFU RecName: Full=AdoMet-dependent rRNA methyltransferase spb1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|66851077|gb|EAL91403.1| rRNA methyltransferase Spb1, putative [Aspergillus fumigatus Af293]
gi|159126832|gb|EDP51948.1| rRNA methyltransferase Spb1, putative [Aspergillus fumigatus A1163]
Length = 795
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 206/513 (40%), Positives = 303/513 (59%), Gaps = 47/513 (9%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+YRLAKE GYR+RA++KL+QL+ K+ FL S +LDLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYRLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
S+++G+DL PI PI ++ + DIT +CRA +++ ++ D VLHDG+PNVG
Sbjct: 68 TQSIIIGVDLAPIKPIPRVITFQSDITTEKCRATIRQHLKHWKA---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A SQ LV+ S+KLAT+FL GTFVTKVFRS+DY+ +L+ KQLF VE KP
Sbjct: 125 AWVQDAFSQAELVLQSMKLATEFLVEGGTFVTKVFRSKDYNPLLWVFKQLFTSVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVE--PRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ +KAP +IDP+ LD K++F + P V K+KR R+GY
Sbjct: 185 SSRNVSAEIFVVCRGFKAPKRIDPKFLDPKHVFAELTDSTPNNEARVFNPEKKKRKREGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD T K T+FI + +P+ ILG+ ++F GD A + + E TT+E++
Sbjct: 245 EEGDYTQFKEIPVTEFINTTDPIAILGTYNKLSFEQSPGGDLALATLNRLEETTDEIRTC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFS-----SAEKATVPASAS--APTEGENEEDADNR 351
C+DL++LGK++F+ LL+WR+++++ F KA P + AP + E + +
Sbjct: 305 CEDLKILGKKEFRSLLRWRLKVREKFGLVVKKGQAKADEPEEVAEVAPMDEELAIQEELQ 364
Query: 352 VLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQ-----DDYTDHELFSL 406
L E E K ++RK+ EKK K+ + + T M I + Q DD T FSL
Sbjct: 365 RLQEKESAKRKKERRKENEKK--RKEIIRMQMHMTTPMDIGMEQLGPGGDDAT----FSL 418
Query: 407 SSIK--GKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEE 464
++ G +D+ A + DSED++ D E SD+E ++LE
Sbjct: 419 KRVERDGARDVIA----SGKLAEIESDSEDDQTESDYDE-------SDDE----GDRLER 463
Query: 465 VLDQAYENYVAKRG--GSTMQRKRAKKAYAQED 495
LD YE Y +R S ++ K+A+K Y E+
Sbjct: 464 ELDSLYEQYQERREDRDSKVRAKKARKDYEAEE 496
>gi|384250298|gb|EIE23778.1| FtsJ-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 361
Score = 342 bits (878), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 168/314 (53%), Positives = 231/314 (73%), Gaps = 8/314 (2%)
Query: 3 KVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQ 62
K KGKHRLDK+Y LAKE G+RSRA++KL+QL+ +F FL +VLDLCAAPGGW+QVA +
Sbjct: 4 KAKGKHRLDKFYHLAKEQGFRSRAAFKLIQLNRQFHFLDRCRSVLDLCAAPGGWLQVAQK 63
Query: 63 RVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPN 122
+PV SL++G+DLVPI +RG ++ DIT + R +KK E + VLHDG+PN
Sbjct: 64 ALPVSSLIIGIDLVPIRAVRGVKTIVGDITTQKARQAIKK---EASGDLIECVLHDGAPN 120
Query: 123 VGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVD 182
VGGAW+ EA SQ+ALV+++++LAT L PKGTFVTK+FRS+DY+++LY KQLF+KVE
Sbjct: 121 VGGAWSSEAYSQSALVLEALRLATDVLGPKGTFVTKIFRSKDYNALLYAFKQLFDKVEAT 180
Query: 183 KPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRHRDG 242
KPAASR+ SAEI+++ + YKAPAKIDPRLLD K+LF+ ++ P ++ + KQKR R+G
Sbjct: 181 KPAASRNTSAEIFVVCLGYKAPAKIDPRLLDPKHLFKATLGPDALLR--QKVKQKRFREG 238
Query: 243 YEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDL 302
YEDG ++ K A F+ S P+E+LG + + A + ++ H+ TT E++ALC DL
Sbjct: 239 YEDGLSSTHKAMSAAAFVASEEPVEMLGRYSRC---EAAAAFVRGHKETTAEIRALCSDL 295
Query: 303 RVLGKQDFKHLLKW 316
+VLG+ +FK LLKW
Sbjct: 296 QVLGRSEFKQLLKW 309
>gi|320037455|gb|EFW19392.1| rRNA methyltransferase Spb1 [Coccidioides posadasii str. Silveira]
Length = 712
Score = 342 bits (878), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 201/533 (37%), Positives = 309/533 (57%), Gaps = 32/533 (6%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K+ FL S +LDLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
SL++G+DL PI PI ++ + DIT +CRA +++ ++ D VLHDG+PNVG
Sbjct: 68 TESLIVGVDLAPIKPIPRVITFQSDITTDKCRATIRQHLKTWKA---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A SQ L + S+KLAT+FL GTFVTKVFRS+DY+S+L+ KQLF VE KP
Sbjct: 125 AWVQDAFSQAELALQSLKLATEFLVAGGTFVTKVFRSKDYNSLLWVFKQLFTSVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ +KAP ++DP+ LD +++F P V K+KR R+GY
Sbjct: 185 SSRNVSAEIFVVCRGFKAPKRMDPKFLDPRHVFAELQDPTPNNEAKVFNPEKKKRKREGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD T K T+FI + +P+ ILG+ +++F GD A + ++ TT+E++
Sbjct: 245 EEGDYTQHKEIPVTEFINTTDPIAILGTYNTLSFHQSPSGDLALATLERLPETTDEIRNC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSA-EKATVPASASAPTEGENEEDADNRVLNEME 357
C+DL+VLGK++F+ LL+WR+++++ F A +K A S D + + EM+
Sbjct: 305 CEDLKVLGKKEFRTLLRWRLKVREQFGLAVKKGAKKAEESEEVAEIEPMDEELAIQEEMQ 364
Query: 358 ELKYAMDQRKKREKKLLAKKRAKDKARKATGM--QIDVMQDDYTDHELFSLSSIKGKKDL 415
L+ RKK+E++ +++ K+ R M D+ + ++ SIK
Sbjct: 365 RLQEHESSRKKKERRRENERKQKEIVRLQMHMITPTDIGMEQSGPMGEGAMFSIK----- 419
Query: 416 AAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENYVA 475
+ + N + D + D + +SD+ SD+E +++LE LD YE Y
Sbjct: 420 -PITREGATRNITSGKMVDVQSEEDEESSATSDVASDDE----EDRLERELDAMYEKYQE 474
Query: 476 KR--GGSTMQRKRAKKAYAQEDQ--LSEGDEDEDTMHTSYDSDKDQGDLDANP 524
R S ++ K+A+K E+ SE D++ D + SD D+ A P
Sbjct: 475 DREERDSKLRAKKARKGLETEEWEGFSESDKESDRL-----SDDDEDAPQAQP 522
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 120/201 (59%), Gaps = 21/201 (10%)
Query: 616 ADSSDDSSSDESED----------EEVDT-KAEILACAKKMLR-KKQREQILDDAYNRYM 663
+D D SD+ ED ++D AE +A A++M +K ++DD +N+Y
Sbjct: 503 SDKESDRLSDDDEDAPQAQPGILRNDIDIITAEAMALAQQMATGEKTSADVVDDGFNKYA 562
Query: 664 FDD-DGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAM 722
F D DGLP+WFL++E +H + +RP+T AA++ + + I+ARP KKV EAK RKK
Sbjct: 563 FRDIDGLPEWFLDDENKHSKPLRPITAAAAAAIREKMRAINARPIKKVREAKGRKKFKEA 622
Query: 723 RKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKK--EYVVAKKGVQVRAG-- 778
++LEK++KK+ ++++ +S+R K + I ++ A K+PK+ + VVAK G + +G
Sbjct: 623 QRLEKLKKKSALLAEDEGVSERDKAQTIARMMARATKKKPKQNVKLVVAKGGNRGISGRP 682
Query: 779 ---KGKV-LVDPRMKKDSRTH 795
KGK +VD R+KKD R
Sbjct: 683 RGVKGKYKIVDARLKKDVRAQ 703
>gi|226294107|gb|EEH49527.1| AdoMet-dependent rRNA methyltransferase spb1 [Paracoccidioides
brasiliensis Pb18]
Length = 776
Score = 342 bits (876), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 267/799 (33%), Positives = 425/799 (53%), Gaps = 104/799 (13%)
Query: 56 WMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV 115
W QVA + +P SL++G+DL PI PI ++ + DIT +CRA +++ + D V
Sbjct: 8 WCQVAAECMPSQSLIVGVDLAPIKPIPKVITFQSDITTDKCRATIRQHFKSWKA---DTV 64
Query: 116 LHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL 175
LHDG+PNVG AW Q+A SQ LV+ S+KLAT+FLAP GTFVTKVFRS+DY+ +L+ KQL
Sbjct: 65 LHDGAPNVGVAWVQDAFSQAELVLQSLKLATEFLAPGGTFVTKVFRSKDYNPLLWVFKQL 124
Query: 176 FEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVD--VLRG 233
F V+ KP +SR+ SAEI+++ + +KAP IDPR LD K++F +P + V
Sbjct: 125 FTSVKATKPPSSRNVSAEIFVVCLGFKAPKHIDPRFLDAKHVFAELQDPTPNYEAKVFNP 184
Query: 234 TKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDH 288
K+KR RDGYE+G+ K ++FI + +P+ ILG ++F D A + +K
Sbjct: 185 EKKKRKRDGYEEGNYIQFKEIPVSEFINTTDPISILGEYNKLSFEQSTGADLALATLKRL 244
Query: 289 ELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAF-------SSAEKATVPASASAPTE 341
TT+E++ C+DL+VLGK++F++LL+WR+++++ F SS + + P +
Sbjct: 245 PETTKEIQLCCEDLKVLGKKEFRNLLRWRIKVREKFGLAVKKGSSKAVESEEVAEVEPMD 304
Query: 342 GENEEDADNRVLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQD-DYTD 400
E D R L E E + ++RK+ E+K K+ + + T M I Q + +
Sbjct: 305 EELALQEDLRHLREKETSRKKRERRKENERK--QKEIVRMQMHMTTPMDIGTEQSGPFGE 362
Query: 401 HELFSLSSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDE 460
++FSL I +A + VN +ED E+ S+ ID + + +
Sbjct: 363 GQMFSLKPINRTGAVANI-TSGKMVNVESEDEEE-----------SATIDEESDEEEDRL 410
Query: 461 QLEEVLDQAYENYVAKRG--GSTMQRKRAKKAYAQE------DQLSEGDEDEDTMHTSYD 512
+ E YE Y A R + ++ K+A+K + E D EGDE+ D
Sbjct: 411 ERELD--AMYERYQANREERDAKLRAKKARKDFEAEEWEGISDFEKEGDEETDN------ 462
Query: 513 SDKDQGDLDANPLMVPLDDGIRPTQEE--ITNK---WFSQEIF---------------AE 552
DA P +VP RP+ + ++NK +F Q+IF E
Sbjct: 463 --------DA-PRLVP-----RPSVDSKGLSNKAAMFFDQDIFQGLGDLGEEDDEQDDGE 508
Query: 553 AVQNGDLGKLGSEDETQVDK----QAEKHS--IPEKAKQKMANDAAGPK--STHNQVSEV 604
Q+GD +D + D+ A + S IP ++ N+ K S H + ++
Sbjct: 509 GHQDGDDIAAPEQDNIESDEGDYSDASESSDDIPTTQEKPKLNNKQTEKRGSKHEKATK- 567
Query: 605 EGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLR-KKQREQILDDAYNRYM 663
D I P + D + D ++ T AE + A++++ +K ++DD +N++
Sbjct: 568 --DNNISPDFEGEKQDPRKKNGQLDIDIIT-AEAMTLAQQIVTGEKTSHDVVDDGFNKFT 624
Query: 664 FDDD-GLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAM 722
F D GLP+WFL++E +H + +P+T AA++ + + I+ARP KKV EAK RKK A
Sbjct: 625 FRDTYGLPEWFLDDESKHSKPQQPITAAAAAAIREKLRAINARPIKKVQEAKGRKKFKAA 684
Query: 723 RKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKK--EYVVAK---KGVQVRA 777
++LEK+RKK+ ++++ +S++ K + I ++ A+ K+PK+ + VVAK KG+ R
Sbjct: 685 KRLEKLRKKSALLAEDEAMSEKDKAQTIARMMSRAMKKKPKQSVKLVVAKGSNKGIAGRP 744
Query: 778 G--KGKV-LVDPRMKKDSR 793
KG+ +VD RMKKD R
Sbjct: 745 KGVKGRYKIVDARMKKDVR 763
>gi|358366633|dbj|GAA83253.1| rRNA methyltransferase Spb1 [Aspergillus kawachii IFO 4308]
Length = 796
Score = 341 bits (875), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 174/382 (45%), Positives = 247/382 (64%), Gaps = 18/382 (4%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+YRLAKE GYR+RA++KL+QL+ K+ FL S VLDLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYRLAKEKGYRARAAFKLIQLNKKYGFLEKSKVVLDLCAAPGSWCQVAAECMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
S+++G+DL PI PI ++ + DIT +CR +++ ++ D VLHDG+PNVG
Sbjct: 68 AQSIIVGVDLAPIKPIPRVITFQSDITTEKCRTTIRQHLKHWKA---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A SQ LV+ S+KLAT+FLA GTFVTKVFRS+DY+ +L+ KQLF VE KP
Sbjct: 125 AWVQDAFSQAELVLQSLKLATEFLAEGGTFVTKVFRSKDYNPLLWVFKQLFASVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ YKAP +IDP+ LD K++F P V K+KR R+GY
Sbjct: 185 SSRNVSAEIFVVCRNYKAPKRIDPKFLDPKHVFAELADPTPNNEAKVFNPEKKKRKREGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD T K T+FI + +P+ ILGS ++F GD A + ++ E TT+E+KA
Sbjct: 245 EEGDYTQFKEVPVTEFINTTDPIAILGSCNKLSFQQSPSGDLALATLERLEETTDEIKAC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSA--------EKATVPASASAPTEGENEEDADN 350
C+DL+VLGK++F++LL+WR+++++ F A E T + AP + E +
Sbjct: 305 CEDLKVLGKKEFRNLLRWRLKVREQFGLAVKKGGQAKEDETEEVAEVAPMDDELAIQEEL 364
Query: 351 RVLNEMEELKYAMDQRKKREKK 372
L E E K ++RK+ E+K
Sbjct: 365 MRLREKETSKQKKERRKENERK 386
>gi|331226587|ref|XP_003325963.1| hypothetical protein PGTG_07793 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309304953|gb|EFP81544.1| hypothetical protein PGTG_07793 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 892
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 208/518 (40%), Positives = 299/518 (57%), Gaps = 37/518 (7%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDKYYRLAKE GYR+R+++KL+QL+ ++ FL S+ +DLCAAPGGW+QVA + +P
Sbjct: 9 GKGRLDKYYRLAKEQGYRARSAFKLIQLNKRYQFLESARCCIDLCAAPGGWLQVAAKWMP 68
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
SL+LG+DLVPI PI V+ +DI CR ++ +++ D+VLHDG+PNVG
Sbjct: 69 ANSLILGVDLVPIKPIPKVVTATEDIRTQSCRMWLRSELKDWKA---DVVLHDGAPNVGT 125
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A SQ+ LV+ S+KLAT+ LA GTF+TKVFRS+DY+S+LY QLF+KVE KP
Sbjct: 126 AWVQDAFSQSELVLHSLKLATEMLAQNGTFITKVFRSKDYNSLLYIFNQLFKKVEATKPP 185
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVD---------------- 229
+SR+ SAEI+++ Y AP KIDPRLLD ++F+ +K D
Sbjct: 186 SSRNVSAEIFVVCQGYLAPKKIDPRLLDPAHVFKDVDLTKKPTDDQAEASSSKLTPNAQN 245
Query: 230 VLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPAC-SAIKDH 288
V + K++R R+GY++GD TL K S A+ I + +P+ ILG I F + AI
Sbjct: 246 VFKPEKKRRTREGYDEGDYTLHKSSTASALINAKDPVSILGVANCIKFDNSQQDQAIYKL 305
Query: 289 ELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDA 348
+ TT E+K DL+VLGK DFK +LKWR +++ K A + AP E E D
Sbjct: 306 KATTAEIKTTLTDLKVLGKGDFKKILKWRTAVRELLGIDSKPVNQAPSEAPVEVE-PLDE 364
Query: 349 DNRVLNEMEELKYAMDQRKKREKKLLAKKRAKDKAR----KATGMQIDVMQDDYTDHELF 404
+ + E+ ++ KRE++ L +KR +D R T M I + + TD E+F
Sbjct: 365 EQIMKEELARIQTEKALENKRERRRLNEKRTRDVQRMQLQMTTPMDIGI---ENTDGEVF 421
Query: 405 SLSSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEE 464
L ++ + + + +D D AE SE P E + + E+ K + LEE
Sbjct: 422 GLQNVDSQDLSSDDDMEDID---GAEGSES--PLDTDPEEDEDEEELSEDEAKL-QTLEE 475
Query: 465 VLDQAYENY---VAKRGGSTMQRKRAKKAYAQEDQLSE 499
LD AY+ Y ++ R+ A+++ EDQ SE
Sbjct: 476 GLDLAYDEYQENQLRKDAKRKAREEARRSRHNEDQESE 513
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 97/161 (60%), Gaps = 13/161 (8%)
Query: 647 RKKQREQILDDAYNRYMFDDDG--LPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDA 704
RKK ++Q++D + R F DD LP WFL++E RH + PVTKE + ++ + + ++A
Sbjct: 720 RKKTKDQLVDSGFKRDAFFDDKNELPTWFLDDEMRHFREHVPVTKEAVKILRDKMRALNA 779
Query: 705 RPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKK 764
RP KK+AEAK RKK +R+LEK + KAN +++ D++++ K +IE+L S + K PK
Sbjct: 780 RPIKKIAEAKGRKKLRTLRRLEKAQSKANTVNETNDLTEKEKSLEIEKLM-SRMHKSPKT 838
Query: 765 EY---VVAKKGV------QVRAGKGKV-LVDPRMKKDSRTH 795
+ +V KG + R KG+ +VD R +K+ R
Sbjct: 839 KSDIKIVVAKGANRGQKGRPRGVKGRYKMVDARGRKELRAQ 879
>gi|429862210|gb|ELA36867.1| et-dependent rrna methyltransferase spb1 [Colletotrichum
gloeosporioides Nara gc5]
Length = 838
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 178/402 (44%), Positives = 256/402 (63%), Gaps = 20/402 (4%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K+ FL S V+DLCAAPG W QVA + P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSRVVVDLCAAPGSWCQVAAETCP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
VG+L++G+DL PI PI ++ + DIT +CRA ++ ++ D VLHDG+PNVG
Sbjct: 68 VGALIVGVDLAPIKPIPKVITFQSDITTEKCRATIRSHLKTWKA---DCVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q++ +Q LV+ S+KLAT+FL GTFVTKVFRS+DY+ +L+ QLF KVE KP
Sbjct: 125 AWNQDSFNQAELVLQSMKLATEFLVEGGTFVTKVFRSKDYNPLLWVFNQLFTKVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ YKAP +IDPR LD + +F P V +KR R+GY
Sbjct: 185 SSRNVSAEIFVVCKGYKAPKRIDPRFLDPRAVFAELKDAAPNNEAKVYNPEVKKRKREGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD T K A++FI + +P+ ILGS ++F GD A +A+ T EE++
Sbjct: 245 EEGDYTQFKAVSASEFIQTVDPIAILGSANQLSFDQPNNGDVALAALDKLPETNEEIRRC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASA----SAPTEGENEEDADN--RV 352
C DL+VLG+++FK LLKWR+++++ F K T A + A E ED D R+
Sbjct: 305 CADLKVLGRKEFKMLLKWRLKVREIFGFPTKKTEKAKSLQEQVAGEEVAEVEDMDEELRI 364
Query: 353 LNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVM 394
E+E LK D +K++E++ +K+ KD R MQ++++
Sbjct: 365 QEELEALKNKDDSKKRKERRKENEKKQKDIVR----MQLNMV 402
>gi|145254616|ref|XP_001398682.1| AdoMet-dependent rRNA methyltransferase spb1 [Aspergillus niger CBS
513.88]
gi|134084264|emb|CAK47295.1| unnamed protein product [Aspergillus niger]
Length = 801
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 174/382 (45%), Positives = 247/382 (64%), Gaps = 18/382 (4%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+YRLAKE GYR+RA++KL+QL+ K+ FL S VLDLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYRLAKEKGYRARAAFKLIQLNKKYGFLEKSKVVLDLCAAPGSWCQVAAECMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
S+++G+DL PI PI ++ + DIT +CR +++ ++ D VLHDG+PNVG
Sbjct: 68 AQSIIVGVDLAPIKPIPRVITFQSDITTEKCRTTIRQHLKHWKA---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A SQ LV+ S+KLAT+FLA GTFVTKVFRS+DY+ +L+ KQLF VE KP
Sbjct: 125 AWVQDAFSQAELVLQSLKLATEFLAEGGTFVTKVFRSKDYNPLLWVFKQLFASVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ YKAP +IDP+ LD K++F P V K+KR R+GY
Sbjct: 185 SSRNVSAEIFVVCRNYKAPKRIDPKFLDPKHVFAELADPTPNNEAKVFNPEKKKRKREGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD T K T+FI + +P+ ILGS ++F GD A + ++ E TT+E+KA
Sbjct: 245 EEGDYTQFKEIPVTEFINTTDPIAILGSYNKLSFQQSPSGDLALATLERLEDTTDEIKAC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSA--------EKATVPASASAPTEGENEEDADN 350
C+DL+VLGK++F++LL+WR+++++ F A E T + AP + E +
Sbjct: 305 CEDLKVLGKKEFRNLLRWRLKVREKFGLAVKKGAQTKEDETEEVAEVAPMDDELAIQEEL 364
Query: 351 RVLNEMEELKYAMDQRKKREKK 372
L E E K ++RK+ E+K
Sbjct: 365 MRLREKETSKQKKERRKENERK 386
>gi|302416843|ref|XP_003006253.1| AdoMet-dependent rRNA methyltransferase SPB1 [Verticillium
albo-atrum VaMs.102]
gi|261355669|gb|EEY18097.1| AdoMet-dependent rRNA methyltransferase SPB1 [Verticillium
albo-atrum VaMs.102]
Length = 718
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 177/397 (44%), Positives = 260/397 (65%), Gaps = 19/397 (4%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K+ FL S ++DLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLIDLCAAPGSWCQVAAETMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V SL++G+DL PI I ++ + DIT +CRA +++ ++ D VLHDG+PNVG
Sbjct: 68 VNSLIVGVDLAPIKAIPKCITFQSDITTDKCRATLRQHLKTWKA---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q++ +Q LV+ S+KLAT+FL GTFVTKVFRS+DY+ +L+ QLF KVE KP
Sbjct: 125 AWNQDSFNQAELVLQSMKLATEFLVEGGTFVTKVFRSKDYNPLLWVFNQLFTKVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRHRDGYED 245
+SR+ SAEI+++ YKAP +IDPR LD K +F S + V +KR RDGYE+
Sbjct: 185 SSRNVSAEIFVVCRGYKAPKRIDPRFLDPKAVFASSGQAPHEAKVYNPEIKKRKRDGYEE 244
Query: 246 GDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKALCD 300
GD TL K + A++FI +++PL ILG +T+ GD A +A+ TT+E++ C+
Sbjct: 245 GDYTLYKEAPASEFIQTDDPLAILGGYNKLTWAQPKNGDVALAAMSKLPETTDEIRLCCE 304
Query: 301 DLRVLGKQDFKHLLKWRMQIKKAFS-SAEKATVPASASAPTEGENEEDADN--RVLNEME 357
DL+VLG++DFK LLKWR+++++ F S +K P P E ED D ++ E++
Sbjct: 305 DLKVLGRRDFKILLKWRLKVREIFGLSTKKDDEP----VPEEVAEVEDMDEELKIQEELQ 360
Query: 358 ELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVM 394
++ +KKRE++ +K+ K+ R MQ+++M
Sbjct: 361 AMRDRESTKKKRERRRENEKKQKEIVR----MQMNMM 393
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 21/227 (9%)
Query: 583 AKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESE-DEEVDT---KAEI 638
A+ M + A P +T E EG PAP D D S+D+ + D +D AE
Sbjct: 490 ARSTMTSLRASPATTRR---ETEGR----PAPAGDDEADWSADQKKADGTLDIDIITAEA 542
Query: 639 LACAKKMLR-KKQREQILDDAYNRYMFDD-DGLPDWFLEEERRHRQAIRPVTKEEIAAMK 696
+ A ++ +K ++DD +NR+ F D DGLP+WF+++E RH + +P+TK A+K
Sbjct: 543 MTLAHQLATGQKTSHDLVDDGFNRHAFRDRDGLPEWFMDDEGRHDKPHKPITKAAADAIK 602
Query: 697 AQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKS 756
+ + +ARP KKVAEAKARKK A ++ EK++KK + + ++ ++++ K I ++
Sbjct: 603 EKMRAYNARPIKKVAEAKARKKFKAAQRYEKLKKKTDSLVNEEGLTEKEKASTIAKMIAK 662
Query: 757 A--VPKRPKKEYVVAK---KGVQVR--AGKGK-VLVDPRMKKDSRTH 795
A V +RP+ V+AK +GV+ R KG+ +VD RMKKD R
Sbjct: 663 AGQVKRRPQPTLVIAKGLNRGVKGRPKGVKGRYTIVDARMKKDLRAQ 709
>gi|350630529|gb|EHA18901.1| hypothetical protein ASPNIDRAFT_120052 [Aspergillus niger ATCC
1015]
Length = 794
Score = 340 bits (871), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 174/382 (45%), Positives = 247/382 (64%), Gaps = 18/382 (4%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+YRLAKE GYR+RA++KL+QL+ K+ FL S VLDLCAAPG W QVA + +P
Sbjct: 2 GKGRLDKWYRLAKEKGYRARAAFKLIQLNKKYGFLEKSKVVLDLCAAPGSWCQVAAECMP 61
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
S+++G+DL PI PI ++ + DIT +CR +++ ++ D VLHDG+PNVG
Sbjct: 62 AQSIIVGVDLAPIKPIPRVITFQSDITTEKCRTTIRQHLKHWKA---DTVLHDGAPNVGT 118
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A SQ LV+ S+KLAT+FLA GTFVTKVFRS+DY+ +L+ KQLF VE KP
Sbjct: 119 AWVQDAFSQAELVLQSLKLATEFLAEGGTFVTKVFRSKDYNPLLWVFKQLFASVEATKPP 178
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ YKAP +IDP+ LD K++F P V K+KR R+GY
Sbjct: 179 SSRNVSAEIFVVCRNYKAPKRIDPKFLDPKHVFAELADPTPNNEAKVFNPEKKKRKREGY 238
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD T K T+FI + +P+ ILGS ++F GD A + ++ E TT+E+KA
Sbjct: 239 EEGDYTQFKEIPVTEFINTTDPIAILGSYNKLSFQQSPSGDLALATLERLEDTTDEIKAC 298
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSA--------EKATVPASASAPTEGENEEDADN 350
C+DL+VLGK++F++LL+WR+++++ F A E T + AP + E +
Sbjct: 299 CEDLKVLGKKEFRNLLRWRLKVREKFGLAVKKGAQTKEDETEEVAEVAPMDDELAIQEEL 358
Query: 351 RVLNEMEELKYAMDQRKKREKK 372
L E E K ++RK+ E+K
Sbjct: 359 MRLREKETSKQKKERRKENERK 380
>gi|308812406|ref|XP_003083510.1| Putative SAM-dependent rRNA methyltransferase SPB1 (ISS)
[Ostreococcus tauri]
gi|116055391|emb|CAL58059.1| Putative SAM-dependent rRNA methyltransferase SPB1 (ISS)
[Ostreococcus tauri]
Length = 948
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 228/543 (41%), Positives = 314/543 (57%), Gaps = 77/543 (14%)
Query: 1 MG-KVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQV 59
MG K KGKHRLDKYY LAKE G+RSRA++KLVQL+ K+ FL + A +DLCAAPGGW+QV
Sbjct: 1 MGRKAKGKHRLDKYYYLAKEQGFRSRAAFKLVQLNRKYDFLSKARACMDLCAAPGGWLQV 60
Query: 60 AVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDG 119
A + +P+ SL++G+DL PI PIRG + +DIT CRA +++ + G + +D+V+HDG
Sbjct: 61 AQKYMPMNSLIVGVDLAPIRPIRGVTTFVEDITTQSCRAALRRATPK-GTQ-YDVVIHDG 118
Query: 120 SPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKV 179
+PNVGG +A+E+ +Q AL +DS++LAT+FL G FVTKVFRS +Y ++LY +QLF+KV
Sbjct: 119 APNVGGNFAKESYTQAALTLDSLRLATEFLGQGGWFVTKVFRSVEYHALLYACRQLFKKV 178
Query: 180 EVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRH 239
E KP ASR SAEIY++ Y AP KIDPRLLD K+LF + K VDV + K+KR+
Sbjct: 179 ESTKPVASRGTSAEIYVVCSGYLAPTKIDPRLLDAKHLFAEYEDEAKAVDVTKDGKRKRN 238
Query: 240 RDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSIT------------FGDPACSA--- 284
R GYEDG +TL K A +FI + P E+LG + F C
Sbjct: 239 RSGYEDGVSTLYKECTAEEFIVQDKPGEMLGLYHTFILDGEVRARLRPQFFLYPCRETRQ 298
Query: 285 ---IKDHEL--------------------TTEEV--------KALCDDLR-------VLG 306
I H L EEV A D++R VLG
Sbjct: 299 PVRITAHSLFEGRSEPLLKRICLSRKGLEPPEEVGWMNLDSHPATTDEIRSLVSDLGVLG 358
Query: 307 KQDFKHLLKWRMQIKKAFSSAEK-----------ATVPASASAPTEGENEEDADN-RVLN 354
K DFK LLKWR QI+K +K ++ +S G++++D +N ++LN
Sbjct: 359 KADFKLLLKWRTQIRKETGLEKKLRRRGEDEESDSSDESSGGEEEAGDSDDDEENDQLLN 418
Query: 355 EMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSIKGKKD 414
EM ELK +M+ +++REKK AK +AK++ R A G+ + + +LFSL+ IK KKD
Sbjct: 419 EMGELKASMEAQRRREKKRKAKIKAKERLRVARGLA-STARRSRDEMDLFSLARIKTKKD 477
Query: 415 LAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENYV 474
L V AA DS DE P+ + SSD + DE R L++ +D+ + Y
Sbjct: 478 LDVVSKAPTPGIDAARDS-DEEPD-EMDSDASSDSEEDERR------LDKEVDEMWAMYK 529
Query: 475 AKR 477
A+R
Sbjct: 530 ARR 532
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/203 (44%), Positives = 116/203 (57%), Gaps = 16/203 (7%)
Query: 607 DFEIVPAPGADSSDDS-SSDESEDEEVD-----TKAEILACAKKMLRKKQREQILDDAYN 660
D E+VP DS DS S D EVD T+A ILA KKM+RKK RE+++DDAYN
Sbjct: 715 DLEVVPEDAPDSGSDSDGSKYGYDSEVDELSDDTRARILALGKKMVRKKDREELIDDAYN 774
Query: 661 RYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRV 720
RY FDDD +PDWF E+ERR + I T ++A KAQ ++ RP KKVAEAK RKK+
Sbjct: 775 RYAFDDDDVPDWFAEDERRFMKPIPQWTAADMAEAKAQLAAVNTRPIKKVAEAKWRKKKR 834
Query: 721 AMRKLEKVRKKANVISDQADISDRSKRKQIEQLY--------KSAVPKRPKKEYVVAKKG 772
A K+ + R +A I DQ D+ D SK K+IE+++ K+ K K+ VVA+K
Sbjct: 835 AEAKISQARVRAAAIVDQEDLPDVSKAKEIERVFAKARRSIGKAKSGKGTPKKVVVARKF 894
Query: 773 VQVRAGKGKVLVDPRMKKDSRTH 795
R G VD R D R
Sbjct: 895 --HRGNAGGPSVDKRQLNDLRAQ 915
>gi|346974298|gb|EGY17750.1| AdoMet-dependent rRNA methyltransferase spb-1 [Verticillium dahliae
VdLs.17]
Length = 878
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 176/399 (44%), Positives = 257/399 (64%), Gaps = 17/399 (4%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K+ FL S ++DLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLIDLCAAPGSWCQVAAETMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V SL++G+DL PI I ++ + DIT +CRA +++ ++ D VLHDG+PNVG
Sbjct: 68 VNSLIVGVDLAPIKAIPKCITFQSDITTDKCRATLRQHLKTWKA---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q++ +Q LV+ S+KLAT+FL GTFVTKVFRS+DY+ +L+ QLF KVE KP
Sbjct: 125 AWNQDSFNQAELVLQSMKLATEFLVEGGTFVTKVFRSKDYNPLLWVFNQLFTKVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ YKAP +IDPR LD K +F P V +KR RDGY
Sbjct: 185 SSRNVSAEIFVVCRGYKAPKRIDPRFLDPKAVFAELKDQAPNNEAKVYNPEIKKRKRDGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD TL K + A++FI +++PL ILG +T+ GD A +A+ TT+E++
Sbjct: 245 EEGDYTLYKEAPASEFIQTDDPLAILGGYNKLTWAQPKNGDVALAALSKLPETTDEIRLC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFS-SAEKATVPASASAPTEGENEEDADN--RVLNE 355
C+DL+VLG++DFK LLKWR++++ F S +K P E ED D ++ E
Sbjct: 305 CEDLKVLGRRDFKILLKWRLKVRDIFGLSTKKDDGDGPVPVPEEVAEVEDMDEELKIQEE 364
Query: 356 MEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVM 394
++ ++ +KKRE++ +K+ K+ R MQ+++M
Sbjct: 365 LQAMRDRESTKKKRERRRENEKKQKEIVR----MQMNMM 399
>gi|326472373|gb|EGD96382.1| rRNA methyltransferase [Trichophyton tonsurans CBS 112818]
Length = 812
Score = 339 bits (869), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 173/381 (45%), Positives = 244/381 (64%), Gaps = 17/381 (4%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+YRLAKE GYR+RA++KL+QL+ K+ FL S +LDLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYRLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVATECMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
SL++G+DL PI PI ++ + DIT +CRA +++ + D VLHDG+PNVG
Sbjct: 68 SQSLIVGVDLSPIKPIPKVITFQSDITTDKCRATIRQHFKTWKA---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A SQ LV+ S+KLAT+FL P G+FVTKVFRS+DY+ +L+ KQLF VE KP
Sbjct: 125 AWVQDAFSQAELVLQSLKLATEFLVPGGSFVTKVFRSKDYNPLLWVFKQLFTTVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ + +KAP IDP+ LD K++F P V K+KR RDGY
Sbjct: 185 SSRNVSAEIFVVCLGFKAPKHIDPKFLDPKHVFAELQDPNPNNEAKVFNPEKKKRKRDGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+ D T K AT+FI + +P+ ILGS +TF GD A + ++ TT E++
Sbjct: 245 EENDWTQHKELPATEFINTTDPISILGSYNKLTFTQSPGGDLALATLQRLPETTNEIRMC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEK-------ATVPASASAPTEGENEEDADNR 351
C+DL+VLGK+DF+ LL+WR+++++ F A K T + P + E D R
Sbjct: 305 CEDLKVLGKKDFRQLLRWRIKVREKFGLAVKKGPKNEEETEEVAEVEPMDEELALQEDLR 364
Query: 352 VLNEMEELKYAMDQRKKREKK 372
++E E K ++RK+ E+K
Sbjct: 365 RMHERETSKNKRERRKENERK 385
>gi|336369156|gb|EGN97498.1| hypothetical protein SERLA73DRAFT_110750 [Serpula lacrymans var.
lacrymans S7.3]
Length = 871
Score = 338 bits (867), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 199/503 (39%), Positives = 292/503 (58%), Gaps = 43/503 (8%)
Query: 1 MGKVK---GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWM 57
MGK + GK RLDKYY+LAKE GYR+R+++KL+QL+ K+SFL S+ +DLCAAPGGW+
Sbjct: 1 MGKAQKKTGKGRLDKYYKLAKEQGYRARSAFKLIQLNKKYSFLESARCCIDLCAAPGGWL 60
Query: 58 QVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117
QVA + +P S+++G+DLV I PI V+ DIT P+CR ++ +++ D+VLH
Sbjct: 61 QVASKYMPANSVIIGVDLVAIKPIPRVVTFASDITTPQCRNLIRSEVKDWKA---DVVLH 117
Query: 118 DGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFE 177
DG+PNVG AW Q+A SQ+ LV+ S+KLA +FL GTFVTKVFRS DY+++++ QLF
Sbjct: 118 DGAPNVGTAWIQDAYSQSELVLMSLKLAVEFLVKGGTFVTKVFRSVDYNNLIWVFNQLFG 177
Query: 178 KVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ----------GSVEPRKV 227
KVE KP +SR+ SAEI+++ + AP IDP+ LD K++F+ G+
Sbjct: 178 KVEATKPPSSRNVSAEIFVVCRDFLAPKHIDPKFLDPKHVFKDLSASAPVDMGTSANNAQ 237
Query: 228 VDVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKD 287
+V + K++R RDGY+DGD TL K A++F+ NP+ +LG++ I F
Sbjct: 238 ANVFQPEKKRRKRDGYDDGDYTLFKKMTASEFVKGTNPIGVLGTINKIAFETDEEKQWLK 297
Query: 288 HELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEED 347
++TT ++KA CDDL+VLGK DFK L++WR+ +++ K + E E D
Sbjct: 298 LDITTGDIKANCDDLKVLGKGDFKALIRWRIALREETGMDLKTKDTEDITEAAETTEEVD 357
Query: 348 ADNRVLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATG-MQIDVMQDDYTDHELFSL 406
D ++ E+E L R K++ ++RA + RK MQ+ + E L
Sbjct: 358 VDQQIEEELERLNAEAATRTKQD-----RRRANEAKRKTIQRMQLQMTAPLDIGLEQHDL 412
Query: 407 SSIKGKKDLAAVEYDDDDV-----------NAAAED-----SEDERPNRDTQEHVSSDID 450
S G++D+ +D D+V + AAED SE+E D E + D+
Sbjct: 413 SLGMGQEDV----FDLDEVQRPRRKKNTVIDLAAEDGMPDMSEEEEYQSD-DESDNGDLS 467
Query: 451 SDEERRKYDEQLEEVLDQAYENY 473
SDE + K LE LD Y+ Y
Sbjct: 468 SDEVKSKKVAALELELDGMYDAY 490
>gi|167527299|ref|XP_001747982.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773731|gb|EDQ87369.1| predicted protein [Monosiga brevicollis MX1]
Length = 1021
Score = 338 bits (867), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 204/501 (40%), Positives = 305/501 (60%), Gaps = 38/501 (7%)
Query: 1 MGK-VK-GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQ 58
MGK VK GK R DK+Y LAKE G R+R+++KLVQL+ KF+FL+ S +DLCAAPGGWMQ
Sbjct: 89 MGKKVKTGKDRRDKFYHLAKETGLRARSAFKLVQLNRKFNFLQQSKVCIDLCAAPGGWMQ 148
Query: 59 VAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
VA Q +P SL++G+DLVPI PI+G + L DIT CR ++K M+ ++A D+VLHD
Sbjct: 149 VAAQNMPPSSLIIGVDLVPIKPIKGCIGLVADITTERCRQMLRKEMKH--LKA-DVVLHD 205
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+PNVG +W Q+A +Q +LV+ S+KLAT+FL KGTFVTKVFRS+DY ++++ KQLF K
Sbjct: 206 GAPNVGTSWIQDAFTQASLVLKSLKLATEFLVEKGTFVTKVFRSRDYHALMWVFKQLFRK 265
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKR 238
V+ KP +SR+ SAEI+++ + AP +IDP++LD KY+F+ + + + D+ + K+K
Sbjct: 266 VQATKPTSSRNVSAEIFVVCQGFLAPDRIDPKMLDPKYVFEEIDDGQTLPDIFKDPKRKP 325
Query: 239 HRDGYEDGDTTLRKVSL-ATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKA 297
+GY+D S+ A DF+ S+N L++L I F D S I H TT EV++
Sbjct: 326 RAEGYDDNVKQSMFTSITAEDFVKSDNHLDLLAMHNQIVFDDD--SLIAKHPATTGEVRS 383
Query: 298 LCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEE----------- 346
L DL+VLGK+DF+ L+KWR Q+ A K A + E+EE
Sbjct: 384 LAVDLKVLGKKDFRTLIKWRQQMAMMLEEAAKLQRAAEGADGEGSEDEEEDEEGEGSEED 443
Query: 347 ----DADNRVLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDV-MQDDYTDH 401
D+ + + + E K + KR+++L AK+ K + R A M+ + M +D +
Sbjct: 444 GESADSQDELETALAEAKAEEKAKLKRKRRLKAKEHRKLRERMALQMETPMDMAEDTNER 503
Query: 402 ELFSLSSIKGKKDLAAVEYDDDDVNAA----AEDSEDERPNRDTQEHVSSDIDSDEERRK 457
LF+L ++K LAA+ D+ D+ AA E +++ RP R H++ D+ +
Sbjct: 504 ILFNLKAVKNADQLAAL--DEGDMEAAMDPLMEVADEARPRR----HITLDLSEEGSH-- 555
Query: 458 YDEQLEEVLDQAYENYVAKRG 478
+EE L++ YE Y+ ++
Sbjct: 556 --AMMEEALERDYEQYLERKN 574
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 117/198 (59%), Gaps = 19/198 (9%)
Query: 606 GDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQREQILDDAYNRYMFD 665
G FE VP D+ + S++ D A LA A +M+ +++R ++++ AYNR+ +
Sbjct: 816 GGFEEVPM---DTPESSTNRPGLD------AAGLAMATEMIVRRKRREMIEAAYNRFAHN 866
Query: 666 DDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKL 725
DD LP WF +EE HR+ I P ++E +K + +EI+ARP ++V EAKARKK+ R L
Sbjct: 867 DDPLPMWFADEENPHRERIIPTSREMADEIKQRQREINARPLRRVLEAKARKKQRVGRAL 926
Query: 726 EKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKE---YVVAKKGVQV-RAGKGK 781
+K+ K+A I++ +++R K +QI+QLYK R +K YVVAK+ + RA + K
Sbjct: 927 DKLTKQAEAIAENDSLTEREKGRQIQQLYKQYNRSRNQKRETTYVVAKRSLAAKRAVRPK 986
Query: 782 VL------VDPRMKKDSR 793
L VD RMK D R
Sbjct: 987 GLTGRYQQVDQRMKADRR 1004
>gi|85103106|ref|XP_961445.1| AdoMet-dependent rRNA methyltransferase spb1 [Neurospora crassa
OR74A]
gi|73621942|sp|Q9P6V8.2|SPB1_NEUCR RecName: Full=AdoMet-dependent rRNA methyltransferase spb-1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|16415988|emb|CAB88626.2| conserved hypothetical protein [Neurospora crassa]
gi|28922991|gb|EAA32209.1| AdoMet-dependent rRNA methyltransferase spb1 [Neurospora crassa
OR74A]
Length = 831
Score = 338 bits (866), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 197/502 (39%), Positives = 292/502 (58%), Gaps = 35/502 (6%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K+ FL S LDLCAAPG W QV + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVALDLCAAPGSWCQVCAETMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
S+++G+DL PI PI ++ + DIT +CRA ++ ++ D+VLHDG+PNVG
Sbjct: 68 TNSIIIGVDLAPIKPIPKVITFQSDITTEKCRATIRSHLKTWKA---DVVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q++ +Q L + S+KLAT+FL GTFVTKVFRS+DY+S+L+ QLF KVE KP
Sbjct: 125 AWVQDSYNQAELALHSLKLATEFLIEGGTFVTKVFRSKDYNSLLWVCNQLFAKVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ +KAP +IDP+LLD + +F+ P V +KR R+GY
Sbjct: 185 SSRNVSAEIFVVCRGFKAPKRIDPKLLDPRSVFEDVAGPAPNNEAKVYNPEVKKRKREGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD T K A++FI + +P+ ILG ++F GD A +A+ TTEE++
Sbjct: 245 EEGDYTQFKEISASEFINTVDPIAILGQYNKLSFEQPKNGDVALAALDKLPETTEEIRLC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEE 358
C DL+VLG+++FK LLKWR+++++ F K T A+ D + R+ E++
Sbjct: 305 CADLKVLGRKEFKLLLKWRLKVREIFGFPSKKTQKAAVDEEVAVVENMDEELRIQEELQR 364
Query: 359 LKYAMDQRKKREKKLLAKKRAKDKARKATGMQ----IDVMQDD-YTDHELFSLSSIKGKK 413
+K +KKRE++ +K+ K+ R M I V Q+ + +F L +I
Sbjct: 365 IKEKETSKKKRERRRENEKKQKEIVRMQMNMTAPMDIGVEQEGPRGEGAMFRLKTI---- 420
Query: 414 DLAAVEYDDDDVNAAAEDSEDERPN--RDTQEHVSSDIDSDEERRKYDEQ---LEEVLDQ 468
D NAA + ++T++ D SD E + DE+ LEE LD
Sbjct: 421 ----------DQNAALNKIAKGKMAVIKETEKPKDYDFGSDGETDESDEEADRLEEELDN 470
Query: 469 AYENYVAKRGGSTMQRKRAKKA 490
Y+ Y +R + + RAKKA
Sbjct: 471 LYDQY-RERKAAADAKYRAKKA 491
>gi|336473098|gb|EGO61258.1| hypothetical protein NEUTE1DRAFT_127919 [Neurospora tetrasperma
FGSC 2508]
gi|350293650|gb|EGZ74735.1| AdoMet-dependent rRNA methyltransferase spb-1 [Neurospora
tetrasperma FGSC 2509]
Length = 832
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 194/497 (39%), Positives = 291/497 (58%), Gaps = 25/497 (5%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K+ FL S LDLCAAPG W QV + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVALDLCAAPGSWCQVCAETMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
S+++G+DL PI PI ++ + DIT +CRA ++ ++ D+VLHDG+PNVG
Sbjct: 68 TNSIIIGVDLAPIKPIPKVITFQSDITTEKCRATIRSHLKTWKA---DVVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q++ +Q L + S+KLAT+FL GTFVTKVFRS+DY+S+L+ QLF KVE KP
Sbjct: 125 AWVQDSYNQAELALHSLKLATEFLIEGGTFVTKVFRSKDYNSLLWVCNQLFAKVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ +KAP +IDP+LLD + +F+ P V +KR R+GY
Sbjct: 185 SSRNVSAEIFVVCRGFKAPKRIDPKLLDPRSVFEDVAGPAPNNEAKVYNPEVKKRKREGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD T K A++FI + +P+ ILG ++F GD A +A+ TTEE++
Sbjct: 245 EEGDYTQFKEISASEFINTVDPIAILGQYNKLSFEQPKNGDVALAALDKLPETTEEIRLC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEE 358
C DL+VLG+++FK LLKWR+++++ F K T A+ D + R+ E++
Sbjct: 305 CADLKVLGRKEFKLLLKWRLKVREIFGFPSKKTQKAAVDEEVAVVENMDEELRIQEELQR 364
Query: 359 LKYAMDQRKKREKKLLAKKRAKDKARKATGMQ--IDV-MQDDYTDHE--LFSLSSIKGKK 413
+K +KKRE++ +K+ K+ R M +D+ M+ + E +F L +I
Sbjct: 365 IKEKETSKKKRERRRENEKKQKEIVRMQMNMTAPMDIGMEQEGPRGEGAMFRLKTIDQNA 424
Query: 414 DLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENY 473
L + V AE +D SD ++DE + D +LEE LD Y+ Y
Sbjct: 425 ALNKIAKGKMAVIKEAEKPKD--------YDFGSDGETDESDEEAD-RLEEELDNLYDQY 475
Query: 474 VAKRGGSTMQRKRAKKA 490
++ + + R KKA
Sbjct: 476 RERKAAADA-KYRTKKA 491
>gi|302908896|ref|XP_003049953.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256730890|gb|EEU44240.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 833
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 164/333 (49%), Positives = 223/333 (66%), Gaps = 10/333 (3%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KLVQL+ K+ FL S +LDLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLVQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAEVMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
SL++G+DL PI PI ++ + DIT +CRA +++ + D VLHDG+PNVG
Sbjct: 68 PNSLIVGVDLAPIKPIPRVITFQSDITTEKCRATIRQHFKTWKA---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AWAQ++ +Q L + ++KLAT+FL GTFVTKVFRS+DY+ +L+ L QLF KVE KP
Sbjct: 125 AWAQDSFNQAELALQAMKLATEFLIEGGTFVTKVFRSKDYNPLLWVLNQLFTKVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ YKAP KIDPR LD + +F P V +KR RDGY
Sbjct: 185 SSRNVSAEIFVVCRGYKAPKKIDPRFLDPRAVFAELTGATPNNEAKVYNPEVKKRKRDGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
EDGD T K A++FI + +P+ +LGS +TF GD A +A+ TT E++
Sbjct: 245 EDGDYTQFKEMPASEFIQTTDPIAVLGSYNKLTFQQPLNGDVALAALDKLPETTPEIRNC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKAT 331
CDDLRVLG++DFK LLKWR+++++ F K T
Sbjct: 305 CDDLRVLGRKDFKLLLKWRLKVREIFGFKTKET 337
>gi|426202111|gb|EKV52034.1| AdoMet-dependent rRNA methyltransferase SPB1 [Agaricus bisporus
var. bisporus H97]
Length = 902
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 198/492 (40%), Positives = 290/492 (58%), Gaps = 23/492 (4%)
Query: 1 MGKVK---GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWM 57
MGK + GK RLDKYY+LAKE GYR+R+++KL+QL+ K++FL + +DLCAAPGGW+
Sbjct: 40 MGKAQKKTGKGRLDKYYKLAKEQGYRARSAFKLIQLNKKYNFLEQARCCIDLCAAPGGWL 99
Query: 58 QVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117
QVA + +P S+++G+DLVPI PI V+ DIT P CR ++ +++ D+VLH
Sbjct: 100 QVASKYMPTNSVIVGVDLVPIKPIPHVVTFAADITTPHCRNLIQGELKDWKA---DVVLH 156
Query: 118 DGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFE 177
DG+PNVG AW Q+A SQ+ LV+ S+KLA QFLA GTFVTKVFRS DY+++++ QLF
Sbjct: 157 DGAPNVGTAWIQDAYSQSELVLMSLKLAVQFLAKGGTFVTKVFRSVDYNNLIWVFSQLFG 216
Query: 178 KVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVV------DV 230
KVE KP +SR+ SAEI+++ + AP IDP+ LD +++F + + K+V +V
Sbjct: 217 KVEATKPPSSRNVSAEIFVVCRDFLAPKLIDPKFLDPRHVFKELASSADKIVGNDVQANV 276
Query: 231 LRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHEL 290
K++R RDGY DGD TL K ATDFI +P+ LG+ ITF D ++
Sbjct: 277 FHPEKKRRQRDGYNDGDYTLFKTISATDFIQGEDPIAALGTFNKITFETEQEKEWLDLDI 336
Query: 291 TTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADN 350
TTE+VKA CDDL+VLGK DFK LL+WR+++++ + K E + E D +
Sbjct: 337 TTEDVKANCDDLKVLGKGDFKMLLRWRLKLREEYGLDVKTKDTKEMVETVEVDEEMDEEQ 396
Query: 351 RVLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQ----IDVMQDDYT----DHE 402
++ E+ L + R KR ++ + R K R M I + Q D +
Sbjct: 397 KISEELARLNTEVAARAKRARRRANEVRTKTIQRMQLQMTAPLDIGLEQHDAALSIGQED 456
Query: 403 LFSLSSIKGKKD-LAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQ 461
+F L + + + A +++ +DD + E + N QE + SDEE+ + ++
Sbjct: 457 VFDLGEAENQMNKRAQIKWLNDDGLEVVDSGESDGQNGSDQEE-DVGLSSDEEQNRKVDE 515
Query: 462 LEEVLDQAYENY 473
LE LD Y Y
Sbjct: 516 LEAELDNLYNTY 527
>gi|409083437|gb|EKM83794.1| hypothetical protein AGABI1DRAFT_117268 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 863
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 198/493 (40%), Positives = 293/493 (59%), Gaps = 25/493 (5%)
Query: 1 MGKVK---GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWM 57
MGK + GK RLDKYY+LAKE GYR+R+++KL+QL+ K++FL + +DLCAAPGGW+
Sbjct: 1 MGKAQKKTGKGRLDKYYKLAKEQGYRARSAFKLIQLNKKYNFLEQARCCIDLCAAPGGWL 60
Query: 58 QVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117
QVA + +P S+++G+DLVPI PI V+ DIT P CR ++ +++ D+VLH
Sbjct: 61 QVASKYMPTNSVIVGVDLVPIKPIPHVVTFAADITTPHCRNLIQGELKDWKA---DVVLH 117
Query: 118 DGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFE 177
DG+PNVG AW Q+A SQ+ LV+ S+KLA QFLA GTFVTKVFRS DY+++++ QLF
Sbjct: 118 DGAPNVGTAWIQDAYSQSELVLMSLKLAVQFLAKGGTFVTKVFRSVDYNNLIWVFSQLFG 177
Query: 178 KVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVV------DV 230
KVE KP +SR+ SAEI+++ + AP IDP+ LD +++F + + K+V +V
Sbjct: 178 KVEATKPPSSRNVSAEIFVVCRDFLAPKLIDPKFLDPRHVFKELASSADKIVGNDVQANV 237
Query: 231 LRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHEL 290
K++R RDGY DGD TL K ATDFI +P+ LG+ ITF D ++
Sbjct: 238 FHPEKKRRQRDGYNDGDYTLFKTISATDFIQGEDPIAALGTFNKITFETEQEKEWLDLDI 297
Query: 291 TTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADN 350
TTE+VKA CDDL+VLGK DFK LL+WR+++++ + K E + E D +
Sbjct: 298 TTEDVKANCDDLKVLGKGDFKMLLRWRLKLREEYGLDVKTKDTKEMVETVEVDEEMDEEQ 357
Query: 351 RVLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQ----IDVMQDDYT----DHE 402
++ E+ L + R KR ++ + R K R M I + Q D + +
Sbjct: 358 KISEELARLNTEVAARAKRARRRANEVRTKTIQRMQLQMTAPLDIGLEQHDASLSIGQED 417
Query: 403 LFSLSSIKGKKD-LAAVEY-DDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDE 460
+F L + + + A +++ +DD + D + D +E V + SDEE+ + +
Sbjct: 418 VFDLGEAENQMNKRAQIKWLNDDGLEVVDSGDSDGQNGSDQEEDVG--LSSDEEQNRKVD 475
Query: 461 QLEEVLDQAYENY 473
+LE LD Y+ Y
Sbjct: 476 ELEAELDNLYDTY 488
>gi|296809876|ref|XP_002845276.1| AdoMet-dependent rRNA methyltransferase spb1 [Arthroderma otae CBS
113480]
gi|238842664|gb|EEQ32326.1| AdoMet-dependent rRNA methyltransferase spb1 [Arthroderma otae CBS
113480]
Length = 804
Score = 335 bits (859), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 173/380 (45%), Positives = 243/380 (63%), Gaps = 16/380 (4%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+YRLAKE GYR+RA++KL+QL+ K+ FL S +LDLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYRLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
SL++G+DL PI I ++ + DIT +CRA +++ + D VLHDG+PNVG
Sbjct: 68 SQSLIVGVDLSPIKAIPKVITFQSDITTDKCRATIRQHFKTWKA---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A SQ LV+ S+KLAT+FL P GTFVTKVFRS+DY+ +L+ KQLF VE KP
Sbjct: 125 AWVQDAFSQAELVLQSLKLATEFLIPGGTFVTKVFRSKDYNPLLWVFKQLFTTVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ + +KAP IDP+ LD K++F P V K+KR RDGY
Sbjct: 185 SSRNVSAEIFVVCLGFKAPKHIDPKFLDPKHVFAELQDPNPNNEAKVFNPEKKKRKRDGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+ D T K AT+FI + +P+ ILGS +TF GD A + ++ TT EV+
Sbjct: 245 EENDWTQHKELPATEFINTTDPISILGSYNKLTFAQSPGGDLALATLQRLPETTNEVRMC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEK------ATVPASASAPTEGENEEDADNRV 352
C+DL+VLGK+DF+ LL+WR+++++ F A K T + P + E D +
Sbjct: 305 CEDLKVLGKKDFRQLLRWRIKVREKFGLAVKKGSKNEETEEVAEVEPMDEELALQEDLKR 364
Query: 353 LNEMEELKYAMDQRKKREKK 372
++E E K ++RK+ E+K
Sbjct: 365 MHERETSKNKRERRKENERK 384
>gi|315044531|ref|XP_003171641.1| AdoMet-dependent rRNA methyltransferase spb1 [Arthroderma gypseum
CBS 118893]
gi|311343984|gb|EFR03187.1| AdoMet-dependent rRNA methyltransferase spb1 [Arthroderma gypseum
CBS 118893]
Length = 812
Score = 335 bits (859), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 173/381 (45%), Positives = 244/381 (64%), Gaps = 17/381 (4%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+YRLAKE GYR+RA++KL+QL+ K+ FL S +LDLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYRLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
SL++G+DL PI I ++ + DIT +CRA +++ + D VLHDG+PNVG
Sbjct: 68 SQSLIVGVDLSPIKAIPKVITFQSDITTDKCRATIRQHFKTWKA---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A SQ LV+ S+KLAT+FL P GTFVTKVFRS+DY+ +L+ KQLF VE KP
Sbjct: 125 AWVQDAFSQAELVLQSLKLATEFLVPGGTFVTKVFRSKDYNPLLWVFKQLFTTVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ + +KAP IDP+ LD K++F P V K+KR RDGY
Sbjct: 185 SSRNVSAEIFVVCLGFKAPKHIDPKFLDPKHVFAELQDPNPNNEAKVFNPEKKKRKRDGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+ D T K AT+FI + +P+ ILGS +TF GD A + ++ TT+EV+
Sbjct: 245 EENDWTQHKELPATEFINTIDPISILGSYNKLTFTQSPGGDLALATLQRLPETTDEVRMC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEK-------ATVPASASAPTEGENEEDADNR 351
C+DL+VLGK+DF+ LL+WR+++++ F A K T + P + E D +
Sbjct: 305 CEDLKVLGKKDFRQLLRWRIKVREKFGLAVKKGPRNDEETEEVAEVEPMDEELALQEDLK 364
Query: 352 VLNEMEELKYAMDQRKKREKK 372
++E E K ++RK+ E+K
Sbjct: 365 RMHERESSKNKRERRKENERK 385
>gi|169779173|ref|XP_001824051.1| AdoMet-dependent rRNA methyltransferase spb1 [Aspergillus oryzae
RIB40]
gi|238499797|ref|XP_002381133.1| rRNA methyltransferase Spb1, putative [Aspergillus flavus NRRL3357]
gi|83772790|dbj|BAE62918.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220692886|gb|EED49232.1| rRNA methyltransferase Spb1, putative [Aspergillus flavus NRRL3357]
gi|391874235|gb|EIT83156.1| putative SAM-dependent rRNA methyltransferase SPB1 [Aspergillus
oryzae 3.042]
Length = 802
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 170/382 (44%), Positives = 241/382 (63%), Gaps = 18/382 (4%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+YRLAKE GYR+RA++KL+QL+ K+ FL S VLDLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYRLAKEKGYRARAAFKLIQLNKKYGFLEKSKVVLDLCAAPGSWCQVAAECMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
S+++G+DL PI PI ++ + DIT +CR +++ ++ D VLHDG+PNVG
Sbjct: 68 AQSIIIGVDLAPIKPIPRVITFQSDITTEKCRTTIRQHLKHWKA---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A SQ LV+ S+KLAT+FL GTFVTKVFRS+DY+++L+ KQLF VE KP
Sbjct: 125 AWVQDAFSQAELVLQSMKLATEFLVEGGTFVTKVFRSKDYNALLWVFKQLFTSVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ +KAP ++DP+ LD K++F P V K+KR RDGY
Sbjct: 185 SSRNVSAEIFVVCRGFKAPKRLDPKFLDPKHVFAELADPTPNNEARVFDPEKKKRKRDGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD T K T+FI + +P+ ILG ++F GD A S + E TT+E++
Sbjct: 245 EEGDWTQFKEIPVTEFINTTDPIAILGQYNKLSFQQPLNGDIALSTLNRLEETTDEIRKC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRV------ 352
C+DL+VLGK++F++LL+WR+++++ F K A P E D +
Sbjct: 305 CEDLKVLGKKEFRNLLRWRLKVREKFGLVVKKGGQAKKDEPEEVAEIAPMDEELAIQEEL 364
Query: 353 --LNEMEELKYAMDQRKKREKK 372
L E E K ++RK+ EKK
Sbjct: 365 QRLREKESSKAKKERRKENEKK 386
>gi|440475598|gb|ELQ44267.1| AdoMet-dependent rRNA methyltransferase spb-1 [Magnaporthe oryzae
Y34]
gi|440481859|gb|ELQ62396.1| AdoMet-dependent rRNA methyltransferase spb-1 [Magnaporthe oryzae
P131]
Length = 884
Score = 332 bits (852), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 200/520 (38%), Positives = 304/520 (58%), Gaps = 34/520 (6%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K+ FL S +LDLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAEVMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V SL++G+DL PI PI ++ + DIT +CRA +++ ++ D VLHDG+PNVG
Sbjct: 68 VSSLIVGVDLAPIKPIPKVITFQSDITTEKCRATIRQHLKTWKA---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q++ +Q L + ++KLAT+FL GTFVTKVFRS+DY+S+L+ QLF+KVE KP
Sbjct: 125 AWVQDSFNQAELTLQAMKLATEFLVEGGTFVTKVFRSKDYNSMLWVFNQLFKKVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ +KAP +IDP+ LD + +F P V + +KR RDGY
Sbjct: 185 SSRNVSAEIFVVCRGFKAPKRIDPKFLDPRAVFAELADPTPNNEAKVYKPEIKKRKRDGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD T K A +FI S +P+ ILGS ++ GD A + ++ TT+E++
Sbjct: 245 EEGDYTQYKELPAYEFIQSTDPIAILGSTNRLSLEQSKNGDVALAVLEKLPETTDEIRTC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEE--------DADN 350
C DL+VLG+++FK LLKWR+ +++ K +V A E D +
Sbjct: 305 CADLKVLGRKEFKLLLKWRLAVREKLGFPTKKSVKKEEEAAAAVAAAEEVAKIESMDEEM 364
Query: 351 RVLNEMEELKYAMDQRKKREKKLLAKKRAKDKAR----KATGMQIDVMQDDYTDHE-LFS 405
R+ +E+E+LK +KKRE++ +++ KD R M I V Q + +F+
Sbjct: 365 RIQHELEKLKERNSTKKKRERRKENERKQKDIVRMQMHMVAPMDIGVEQAGPEGEDAMFA 424
Query: 406 LSSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEV 465
L +++ K D+ V A+ D++ +D + S ++D+E + ++LE
Sbjct: 425 LRAVE-KGDVMRRLAKGKMVVASEADAK-----KDRDSGIGSSGETDDESDEELDRLETE 478
Query: 466 LDQAYENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDED 505
LD Y+ + ++ S + RAKKA Q GD DE+
Sbjct: 479 LDDMYDQFRERKAASDA-KYRAKKAR----QARNGDGDEE 513
>gi|154309412|ref|XP_001554040.1| hypothetical protein BC1G_07600 [Botryotinia fuckeliana B05.10]
Length = 807
Score = 331 bits (849), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 168/391 (42%), Positives = 249/391 (63%), Gaps = 11/391 (2%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K+ FL S +LDLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAETMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V SL++G+DL PI PI ++ + DIT +CRA ++ + D VLHDG+PNVG
Sbjct: 68 VSSLIVGVDLSPIKPIPRVITFQSDITTEKCRATIRTHFKSWKA---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q++ +Q L + S+KLAT+FLAP GTFVTKVFRS+DY+S+L+ QLF KVE KP
Sbjct: 125 AWVQDSFNQAELALQSLKLATEFLAPGGTFVTKVFRSKDYNSLLWVFNQLFTKVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ +KAP +DP+ +D +++F P V +KR RDGY
Sbjct: 185 SSRNVSAEIFVVCQGFKAPKHLDPKFVDPRHVFAELSDPTPNNEAKVFNPEIKKRKRDGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
ED + T K A++FI + +P+ ILGS+ ++F GD A +A+ TT+E++
Sbjct: 245 EDDNMTQFKEIPASEFIQTTDPIAILGSMNRLSFVQPPNGDVALAALDKLPETTDEIRND 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEE 358
C DLRVLG+++F++LLKWR+++++ F A K A + D + ++ E++
Sbjct: 305 CADLRVLGRKEFRNLLKWRLKVREKFGFATKKGAKAEPEE-VAEVEDMDEELKIQEELQA 363
Query: 359 LKYAMDQRKKREKKLLAKKRAKDKARKATGM 389
+ RKKREK+ +K+ ++ R M
Sbjct: 364 MSEKESSRKKREKRRENEKKQREIVRMQLHM 394
>gi|261191079|ref|XP_002621948.1| AdoMet-dependent rRNA methyltransferase SPB1 [Ajellomyces
dermatitidis SLH14081]
gi|239590992|gb|EEQ73573.1| AdoMet-dependent rRNA methyltransferase SPB1 [Ajellomyces
dermatitidis SLH14081]
Length = 829
Score = 331 bits (849), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 174/401 (43%), Positives = 255/401 (63%), Gaps = 18/401 (4%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K+ FL S V+DLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSRVVIDLCAAPGSWCQVAAECMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
SL++G+DL PI PI ++ + DIT +CRA +++ ++ D VLHDG+PNVG
Sbjct: 68 SQSLIIGVDLAPIKPIPKVITFQSDITTDKCRATIRQHLKTWKA---DTVLHDGAPNVGV 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A SQ LV+ S+KLAT+FL P GTFVTKVFRS+DY+ +L+ KQLF VE KP
Sbjct: 125 AWVQDAFSQAELVLQSLKLATEFLVPGGTFVTKVFRSKDYNPLLWVFKQLFNNVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ +KAP IDP+ LD +++F P V K+KR RDGY
Sbjct: 185 SSRNVSAEIFVVCQGFKAPKHIDPKFLDPRHVFAELQDPTPNHEAKVFNPEKKKRKRDGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+G+ T K ++FI + +P+ ILG ++F GD A + + TT+E++
Sbjct: 245 EEGNYTQFKEIPVSEFINTTDPISILGEYNKLSFEQSTGGDLALATLARLPETTKEIQLC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEE 358
C+DL+VLGK++F++LL+WR+++++ F A V S P E+EE A+ ++ EE
Sbjct: 305 CEDLKVLGKKEFRNLLRWRIKVREKFGLA----VKKGPSKP--DESEEVAEVEPMD--EE 356
Query: 359 LKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYT 399
L D ++ R+K+ KK+ + K + +I MQ T
Sbjct: 357 LAIQQDLQRMRDKETSRKKKERRKENERKQKEIVRMQMHMT 397
>gi|327354853|gb|EGE83710.1| hypothetical protein BDDG_06655 [Ajellomyces dermatitidis ATCC
18188]
Length = 829
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 174/401 (43%), Positives = 255/401 (63%), Gaps = 18/401 (4%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K+ FL S V+DLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVVIDLCAAPGSWCQVAAECMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
SL++G+DL PI PI ++ + DIT +CRA +++ ++ D VLHDG+PNVG
Sbjct: 68 SQSLIIGVDLAPIKPIPKVITFQSDITTDKCRATIRQHLKTWKA---DTVLHDGAPNVGV 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A SQ LV+ S+KLAT+FL P GTFVTKVFRS+DY+ +L+ KQLF VE KP
Sbjct: 125 AWVQDAFSQAELVLQSLKLATEFLVPGGTFVTKVFRSKDYNPLLWVFKQLFNNVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ +KAP IDP+ LD +++F P V K+KR RDGY
Sbjct: 185 SSRNVSAEIFVVCQGFKAPKHIDPKFLDPRHVFAELQDPTPNHEAKVFNPEKKKRKRDGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+G+ T K ++FI + +P+ ILG ++F GD A + + TT+E++
Sbjct: 245 EEGNYTQFKEIPVSEFINTTDPISILGEYNKLSFEQSTGGDLALATLARLPETTKEIQLC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEE 358
C+DL+VLGK++F++LL+WR+++++ F A V S P E+EE A+ ++ EE
Sbjct: 305 CEDLKVLGKKEFRNLLRWRIKVREKFGLA----VKKGPSKP--DESEEVAEVEPMD--EE 356
Query: 359 LKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYT 399
L D ++ R+K+ KK+ + K + +I MQ T
Sbjct: 357 LAIQQDLQRMRDKETSRKKKERRKENERKQKEIVRMQMHMT 397
>gi|239613095|gb|EEQ90082.1| AdoMet-dependent rRNA methyltransferase spb1 [Ajellomyces
dermatitidis ER-3]
Length = 804
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 174/401 (43%), Positives = 255/401 (63%), Gaps = 18/401 (4%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K+ FL S V+DLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVVIDLCAAPGSWCQVAAECMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
SL++G+DL PI PI ++ + DIT +CRA +++ ++ D VLHDG+PNVG
Sbjct: 68 SQSLIIGVDLAPIKPIPKVITFQSDITTDKCRATIRQHLKTWKA---DTVLHDGAPNVGV 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A SQ LV+ S+KLAT+FL P GTFVTKVFRS+DY+ +L+ KQLF VE KP
Sbjct: 125 AWVQDAFSQAELVLQSLKLATEFLVPGGTFVTKVFRSKDYNPLLWVFKQLFNNVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ +KAP IDP+ LD +++F P V K+KR RDGY
Sbjct: 185 SSRNVSAEIFVVCQGFKAPKHIDPKFLDPRHVFAELQDPTPNHEAKVFNPEKKKRKRDGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+G+ T K ++FI + +P+ ILG ++F GD A + + TT+E++
Sbjct: 245 EEGNYTQFKEIPVSEFINTTDPISILGEYNKLSFEQSTGGDLALATLARLPETTKEIQLC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEE 358
C+DL+VLGK++F++LL+WR+++++ F A V S P E+EE A+ ++ EE
Sbjct: 305 CEDLKVLGKKEFRNLLRWRIKVREKFGLA----VKKGPSKP--DESEEVAEVEPMD--EE 356
Query: 359 LKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYT 399
L D ++ R+K+ KK+ + K + +I MQ T
Sbjct: 357 LAIQQDLQRMRDKETSRKKKERRKENERKQKEIVRMQMHMT 397
>gi|425772161|gb|EKV10575.1| AdoMet-dependent rRNA methyltransferase spb1 [Penicillium digitatum
Pd1]
gi|425777448|gb|EKV15622.1| AdoMet-dependent rRNA methyltransferase spb1 [Penicillium digitatum
PHI26]
Length = 815
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 156/326 (47%), Positives = 223/326 (68%), Gaps = 10/326 (3%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+YRLAKE GYR+RA++KL+QL+ K+ FL S +DLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYRLAKEKGYRARAAFKLIQLNQKYGFLEKSRVCIDLCAAPGSWCQVAAEYMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
SL++G+DL PI PI A++ + DIT +CRA ++ ++ D+VLHDG+PNVG
Sbjct: 68 AQSLIIGVDLSPIKPIPRAITFQSDITTDKCRATIRSHIKHWKA---DVVLHDGAPNVGA 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A SQ LV++S++LAT FL GTFVTKVFRS+DY+ +L+ KQLF VE KP
Sbjct: 125 AWVQDAFSQAELVLESLRLATDFLGEGGTFVTKVFRSKDYNPLLWVFKQLFNSVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ +KAP +IDP+ LD K++F + P V K+KR R+GY
Sbjct: 185 SSRNVSAEIFVVCRGFKAPKRIDPKFLDPKHVFAELTAPTPNYEAKVFNPEKKKRKREGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD T K T+FI S +P+ ILG ++F GD A S + E TT+E++
Sbjct: 245 EEGDYTQHKELPVTEFINSMDPISILGGYNKLSFQQPPGGDLALSTLDRLEETTDEIRTC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAF 324
C+DL++LGK++F++LL+WR++ ++ F
Sbjct: 305 CEDLKILGKKEFRNLLRWRIKCREKF 330
>gi|407927769|gb|EKG20655.1| Ribosomal RNA methyltransferase RrmJ/FtsJ [Macrophomina phaseolina
MS6]
Length = 831
Score = 330 bits (845), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 177/427 (41%), Positives = 271/427 (63%), Gaps = 17/427 (3%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K++FL S ++DLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYNFLEKSKVLIDLCAAPGSWCQVAAEVMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
SL++G+DL PI PI ++ + DIT +CRA +++ ++ ++A D VLHDG+PNVG
Sbjct: 68 PNSLIVGVDLSPIKPIPRCITFQSDITTDKCRATLRQHLKT--LKA-DAVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A +Q L + S+KLAT+FL GTFVTKVFRS+DY+S+L+ QLFEKVE KP
Sbjct: 125 AWVQDAFTQAELTLQSMKLATEFLREGGTFVTKVFRSKDYNSLLWVFNQLFEKVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ ++AP +DP+ +D +++F + P V +KR R+GY
Sbjct: 185 SSRNVSAEIFVVCRGFRAPKHLDPKFVDPRHVFAELAAPAPNNEAKVFNPEVKKRKREGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD T K + ++FI + +P+ +LGS+ ++F GD A + I TT E++A
Sbjct: 245 EEGDWTQFKEATVSEFIQTTDPIAMLGSMNKLSFEQKPNGDIAQATIAKLPETTAEIRAC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKK--AFSSAEKATVPASASAPTEGENEEDADNRVLNEM 356
CDDL+VLG+ DFK LL+WR+++++ FSS +KA A D + +V E+
Sbjct: 305 CDDLKVLGRSDFKRLLRWRLKVREIFGFSSKQKAAKEAEKEEEVAEIEPMDEELQVQEEL 364
Query: 357 EELKYAMDQRKKREKKLLAKKRAKDKAR----KATGMQIDVMQ-DDYTDHELFSLSSIKG 411
+ +K D +K++E++ +++ K+ R T M+I + Q + LF L S+
Sbjct: 365 QRMKEHEDSKKRKERRKENERKQKEIQRMQLHMTTPMEIGMEQVGPNGEDSLFQLKSVDK 424
Query: 412 KKDLAAV 418
LA V
Sbjct: 425 AGALAKV 431
>gi|361124525|gb|EHK96607.1| putative AdoMet-dependent rRNA methyltransferase SPB1 [Glarea
lozoyensis 74030]
Length = 828
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 158/334 (47%), Positives = 227/334 (67%), Gaps = 10/334 (2%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K+ FL S +LDLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAEAMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V SL++G+DL PI PI ++ + DIT +CRA ++ + D VLHDG+PNVG
Sbjct: 68 VSSLIVGVDLSPIKPIPRVITFQSDITTDKCRATIRSHFKTWKA---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q++ +Q L + ++KLAT+FLA GTFVTKVFRS+DY+S+L+ QLF KVE KP
Sbjct: 125 AWVQDSFNQAELALQAMKLATEFLAEGGTFVTKVFRSKDYNSLLWVFNQLFTKVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ +KAP +IDP+ LD + +F P V +KR RDGY
Sbjct: 185 SSRNVSAEIFVVCQGFKAPKRIDPKFLDPRSVFAELSDPTPNNEAKVFNPEIKKRKRDGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
EDG+ T K A++FI + +P+ ILGS+ ++F GD A +A+ TT+E++
Sbjct: 245 EDGNMTQYKEVPASEFIQTTDPIAILGSLNKLSFDQPPNGDVALAALDKLPETTQEIRDC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATV 332
C DLRVLG+++F++LLKWR+++++ F A K +V
Sbjct: 305 CKDLRVLGRKEFRNLLKWRLKVREKFGFATKKSV 338
>gi|213402435|ref|XP_002171990.1| AdoMet-dependent rRNA methyltransferase spb1 [Schizosaccharomyces
japonicus yFS275]
gi|212000037|gb|EEB05697.1| AdoMet-dependent rRNA methyltransferase spb1 [Schizosaccharomyces
japonicus yFS275]
Length = 795
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 186/442 (42%), Positives = 275/442 (62%), Gaps = 16/442 (3%)
Query: 1 MGKVK---GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWM 57
MGK++ K RLDK+Y+LAKE GYRSRA++KLVQL+ K++FL + V+DLCAAPGGW+
Sbjct: 1 MGKIEKKTAKGRLDKWYKLAKEQGYRSRAAFKLVQLNKKYNFLEKARVVIDLCAAPGGWL 60
Query: 58 QVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117
QVA + GSL++G+DL PI PI ++ +DIT CR++++ ++ D+V+H
Sbjct: 61 QVASKTCKPGSLIVGVDLAPIKPIPNCITFVEDITSDRCRSQLRGYLKTWKA---DVVVH 117
Query: 118 DGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFE 177
DG+PNVG AW Q+A Q LV+ ++KLA +FL P GTFVTKVFRS+DY+++++ KQLF
Sbjct: 118 DGAPNVGAAWLQDAYGQAELVLMAMKLACEFLGPGGTFVTKVFRSKDYNNLIWVFKQLFN 177
Query: 178 KVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVD--VLRGTK 235
KVE KP +SR+ SAEI+++ YKAP K+DPR D K +F+ EP + V K
Sbjct: 178 KVEATKPPSSRNVSAEIFVVCRGYKAPHKLDPRFTDPKSVFEDVPEPTPNAEAKVFHPEK 237
Query: 236 QKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFG--DPACSAIKDHELTTE 293
+KR R+GY + D TL KV DFI +++P+ ILG+ I F D I+ +T E
Sbjct: 238 KKRSREGYAENDYTLHKVVPVVDFIRADDPINILGTSAEIGFPEDDEEAQKIRKMSITNE 297
Query: 294 EVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVL 353
+V + C DL+VLGK+DF+ LL+WR++++ + +K P A E E D + R+
Sbjct: 298 DVISYCSDLQVLGKKDFRDLLRWRLKVRALYGLGKK-NKPEGEVAQVEEMPEMDEEERLD 356
Query: 354 NEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQ--IDVMQDDYTDHELFSLSSIKG 411
E+E L + KRE++ +++ K+ R GM+ +D+ + E+F L S +
Sbjct: 357 QELESLNEVERAKLKRERRRNNERKKKEITRMQMGMEAPMDIGLEQIVGEEVFGLKSAE- 415
Query: 412 KKDLAAVEYDDDDVNAAAEDSE 433
K L E+ ++ AA ED E
Sbjct: 416 KHGLRTFEH--SEMPAAVEDEE 435
>gi|115387475|ref|XP_001211243.1| AdoMet-dependent rRNA methyltransferase spb-1 [Aspergillus terreus
NIH2624]
gi|114195327|gb|EAU37027.1| AdoMet-dependent rRNA methyltransferase spb-1 [Aspergillus terreus
NIH2624]
Length = 806
Score = 328 bits (841), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 168/387 (43%), Positives = 247/387 (63%), Gaps = 15/387 (3%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+YRLAKE GYR+RA++KL+QL+ K+ FL S +LDLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYRLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
S+++G+DL PI PI +S + DIT +CRA ++ ++ D VLHDG+PNVG
Sbjct: 68 AQSIIIGVDLAPIKPIPRVISFQSDITTEKCRATIRSHLKTWKA---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A SQ LV+ S+KLAT+FL GTFVTKVFRS+DY+++L+ KQLF VE KP
Sbjct: 125 AWVQDAFSQAELVLQSMKLATEFLVEGGTFVTKVFRSKDYNALLWVFKQLFTSVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ +KAP +DP+ LD K++F P V K+KR R+GY
Sbjct: 185 SSRNVSAEIFVVCRGFKAPKHLDPKFLDPKHVFAELADPTPNNEARVFNPEKKKRKREGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD T K T+FI + +P+ ILG ++F GD A + + E TT E++
Sbjct: 245 EEGDWTQYKEIPVTEFINTTDPIAILGQYNKLSFQQLPGGDIALATLDRLEETTPEIRQC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEE 358
C+DL+VLGK++F++LL+WR+++++ F K A P EE A+ +++
Sbjct: 305 CEDLKVLGKKEFRNLLRWRLKVREKFGLVVKKGGQAKKDEP-----EEVAEIAPMDDELA 359
Query: 359 LKYAMDQRKKREKKLLAKKRAKDKARK 385
++ + + K++E + K+R K+ RK
Sbjct: 360 IQEELYRLKEKESSRMKKERRKENERK 386
>gi|449302456|gb|EMC98465.1| hypothetical protein BAUCODRAFT_87111 [Baudoinia compniacensis UAMH
10762]
Length = 833
Score = 328 bits (841), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 162/342 (47%), Positives = 235/342 (68%), Gaps = 13/342 (3%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
K RLDKYY LAKE GYR+RA++KL+QL+ K+SFL+ S ++DLCAAPG W+QVA + +P
Sbjct: 8 AKARLDKYYYLAKEKGYRARAAFKLIQLNKKYSFLQQSKCLIDLCAAPGSWLQVAAETMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V SL++G+DL PI PI ++ + DIT +CRA ++ ++ D V+HDG+PNVG
Sbjct: 68 VKSLIVGVDLAPIKPIPRTITFQGDITTDKCRATIRGHLKTWKA---DTVIHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A SQN LV+ S+KLAT+FLAP+GTFVTKVFRS+D + + + KQLF KVE KP
Sbjct: 125 AWVQDAFSQNELVLSSLKLATEFLAPQGTFVTKVFRSKDSAKLEWIFKQLFAKVEQTKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVD---VLRGTKQKRHRDG 242
+SR+ SAE + + +KAP +DPR LD K+ F VE V + V K+KR R+G
Sbjct: 185 SSRNVSAETFYVCRGFKAPKHLDPRFLDPKHAF-AEVEEAAVNNEARVFNPEKKKRKREG 243
Query: 243 YEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKA 297
YE+GD T + A++F+ + +P+++LGS+ + F GD A +A+ TTEE++
Sbjct: 244 YEEGDWTQFSEAAASEFVQTQDPIQMLGSLNRLHFRQEGNGDIALAALDKLPETTEEIRL 303
Query: 298 LCDDLRVLGKQDFKHLLKWRMQIKKAFSSAE-KATVPASASA 338
C DL+VLG+++FK LL+WR++ ++ F + K++ PA+ SA
Sbjct: 304 CCADLKVLGRKEFKMLLRWRLKARERFGFRQKKSSNPAAPSA 345
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 102/174 (58%), Gaps = 16/174 (9%)
Query: 636 AEILACAKKMLRKKQREQIL-DDAYNRYMFDD-DGLPDWFLEEERRHRQAIRPVTKEEIA 693
AE + A + + +Q L DDA+ ++ D DGLP+WFL++E +H + RP+T E A
Sbjct: 647 AEAMTLAHALATGQVTKQALEDDAFTKFSHRDVDGLPEWFLDDESKHSRQQRPITAEAAA 706
Query: 694 AMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISD-----QADISDRSKRK 748
A+K +F+ ++ARP KKV EAKARK A R+LEK+R+K+ +++ S++ K
Sbjct: 707 AIKEKFRALNARPIKKVREAKARKTLRAARRLEKLRRKSEGLAEGDGDGMGVFSEKDKAG 766
Query: 749 QIEQLY----KSAVPKRPKKEYVVA----KKGVQVRAGKGKV-LVDPRMKKDSR 793
QI +L KS ++P + VVA K + R KGK +VD R+KKD R
Sbjct: 767 QIAKLMAKAKKSGAKRKPSVKVVVAGGANKGAGRPRGVKGKYKMVDKRLKKDVR 820
>gi|330840582|ref|XP_003292292.1| hypothetical protein DICPUDRAFT_57851 [Dictyostelium purpureum]
gi|325077462|gb|EGC31172.1| hypothetical protein DICPUDRAFT_57851 [Dictyostelium purpureum]
Length = 817
Score = 328 bits (841), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 203/479 (42%), Positives = 288/479 (60%), Gaps = 27/479 (5%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
K RLDK+Y LAKE GYRSRA++KLVQL+ K++FL S+ A LDLCAAPGGWMQVA + +P
Sbjct: 9 AKGRLDKFYYLAKEQGYRSRAAFKLVQLNKKYNFLGSAKACLDLCAAPGGWMQVASKYMP 68
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V SL++G+DLVPI +R +SL +DIT +CR +KK ++ V D+ LHDG+PN+G
Sbjct: 69 VQSLIVGVDLVPIRQVRNCISLAEDITTQKCRTEIKKALKTWKV---DVCLHDGAPNMGT 125
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
+W Q+A Q L + ++KLAT+FLA G FVTKVFR DY+S+++ +LF KVE KP
Sbjct: 126 SWVQDAYQQAELTLHALKLATEFLATGGWFVTKVFRGADYNSLIWVFNKLFRKVESTKPQ 185
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRHRDGYED 245
ASR+ASAEI+++ + P KIDP+LLD K++F+ E K VDVL K KR+R GYED
Sbjct: 186 ASRNASAEIFVVCQGFLNPKKIDPKLLDPKFVFKEVQEGPKKVDVLSEKKAKRNRSGYED 245
Query: 246 GDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLRVL 305
G T LRK +DFI S+ L L S T F D K H TT E+ DLRVL
Sbjct: 246 GVTMLRKKGFISDFIESSQHLLDLASFTEYEF-DENAQIFKQHPSTTPEIIECFRDLRVL 304
Query: 306 GKQDFKHLLKWR---MQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEELKYA 362
GK DF ++KWR + K+ + E+ + E+DA + E+E+LK
Sbjct: 305 GKNDFSKIIKWRKAMAEYKEKLDNPEEEETKEPEPERELTQEEKDA--LLDTELEQLKEN 362
Query: 363 MDQRKKREKKLLAKKRAKDKARKATGMQI--DVMQDDYTDHELFSLSSIKGKKDL---AA 417
+++++++EKK +K+ ++ R M I D +++ D +LF + KGK+D
Sbjct: 363 LEKKRRKEKKKANEKKRLERKRIELTMHIPGDKIEEG-ADDDLFVM---KGKQDFQDDVV 418
Query: 418 VEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENYVAK 476
E+ D D + + D + P+R TQE D DE +E+ L+ Y+ Y+ +
Sbjct: 419 AEHGDSDSDDSDSDDSEVEPDRRTQEEAEMD---------NDEFMEQQLEDQYKQYILR 468
>gi|383850870|ref|XP_003700997.1| PREDICTED: putative rRNA methyltransferase 3-like [Megachile
rotundata]
Length = 831
Score = 328 bits (840), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 191/455 (41%), Positives = 270/455 (59%), Gaps = 37/455 (8%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
GKV GK R DKYY LAKE GYRSRA++KL+QL+ KF FL+ S +DLCAAPGGWMQVA
Sbjct: 5 GKV-GKQRKDKYYHLAKETGYRSRAAFKLIQLNRKFEFLQKSRVCIDLCAAPGGWMQVAR 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
Q +PV S+V+G+DL PI PI G +SL +DIT +CR + + E D+VLHDG+P
Sbjct: 64 QNMPVSSIVVGVDLFPIKPIPGCISLVEDITTDKCRVAISR---ELKTWKADVVLHDGAP 120
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG W +A Q +L + ++K+AT FL P G FVTK+FRS+DY +L+ L+QLF KV
Sbjct: 121 NVGKNWLHDAYQQVSLTLSALKMATYFLRPGGWFVTKMFRSKDYQPLLWVLQQLFRKVHA 180
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHR 240
KP ASR SAEI+++ Y AP K+DP+ LD KY+F + +EP ++VL ++K
Sbjct: 181 TKPQASRLESAEIFVVCQYYIAPDKLDPKFLDPKYVFSELDIEPTNKLNVLNPVQRKHKA 240
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
+GY + D TL DF+ N +E L +V++I F D I +HELTT E+K C
Sbjct: 241 EGYPENDYTLYHTLSVKDFVAHENAVEALQTVSAIVFDD---EKITNHELTTNEIKECCK 297
Query: 301 DLRVLGKQDFKHLLKWRMQIKKAF--------SSAEKATVPASASAPTEGENEEDADNRV 352
D++VLGK+D + LLKW IK+A A+ T A T+ E E+ D +
Sbjct: 298 DIKVLGKKDLRRLLKWWKSIKEALEEEESPAEKEADATTETTEAPPLTQEELEDMEDEEI 357
Query: 353 LNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQID-----------VMQDDYTDH 401
++ EL R + E++L KK+ +K R+ M+++ +M+ D
Sbjct: 358 TKQIGEL------RAETERELKRKKKKVNKERQKLNMRLNLKMVHKGNEGPIMEGD---- 407
Query: 402 ELFSLSSIKGKKDLAAVEYDDDDVNAAAEDSEDER 436
E+F+L IK + L +V DV A ++ D++
Sbjct: 408 EMFTLKQIKTHEQLESVIDQHPDVVAESDVESDDQ 442
>gi|452986947|gb|EME86703.1| hypothetical protein MYCFIDRAFT_77468 [Pseudocercospora fijiensis
CIRAD86]
Length = 846
Score = 328 bits (840), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 177/402 (44%), Positives = 255/402 (63%), Gaps = 21/402 (5%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
K RLDKYY LAKE GYR+RA++KL+QL+ KFSFL+++ ++DLCAAPG W+QVA + +P
Sbjct: 8 AKARLDKYYYLAKEKGYRARAAFKLIQLNKKFSFLQNAKCLIDLCAAPGSWLQVAAEVMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
SL+LG+DL PI PI ++ + DIT + RA ++ ++ D V+HDG+PNVG
Sbjct: 68 QKSLILGVDLSPIKPIPKTITWQGDITSDKTRAIIRGHLKTWKA---DCVIHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A SQN LV+ S+KLAT+FLA GTFV+KVFRS+D + + + KQLF KV+ KP
Sbjct: 125 AWVQDAFSQNELVLCSLKLATEFLANGGTFVSKVFRSKDSAKLEWIFKQLFNKVDQTKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKV--VDVLRGTKQKRHRDGY 243
+SR+ SAE + + YKAP +DP+ LD Y F E + V K+KR R+GY
Sbjct: 185 SSRNVSAETFYVCRGYKAPKHLDPKFLDPHYAFMEVKEKGQSDEAKVFNPEKKKRKREGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD T + A++FI + +P+ +LGS+ + F GD A +A+ TTEEV+
Sbjct: 245 EEGDWTQFHEAPASEFIQTQDPIAMLGSLNRLHFRQEANGDIALAALDKLSETTEEVREN 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPAS---ASAPTEGENEE--------D 347
C+DL+VLG+++FK LL+WR++ ++ F +K T S PTEGE E D
Sbjct: 305 CEDLKVLGRKEFKVLLRWRLKARERFGFKQKRTDHKSQEKTQEPTEGEAGEEVAVVESMD 364
Query: 348 ADNRVLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGM 389
+ R E++ +K A D+ K++EK+ +K+ KD R GM
Sbjct: 365 DEMRYQAELQAMKDAQDKHKRKEKRRENEKKQKDIVRMQMGM 406
>gi|321474059|gb|EFX85025.1| hypothetical protein DAPPUDRAFT_300798 [Daphnia pulex]
Length = 861
Score = 328 bits (840), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 191/450 (42%), Positives = 274/450 (60%), Gaps = 25/450 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK KGK R DK+Y LAKE GYRSRA++KL+QL+ KF FL S V+DLCAAPG WMQVA
Sbjct: 1 MGK-KGKARQDKFYHLAKETGYRSRAAFKLLQLNRKFEFLEKSRVVIDLCAAPGSWMQVA 59
Query: 61 VQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
Q +PV SL++G+DL P+ PI+G ++L++DIT +C +KK E D+VLHDG+
Sbjct: 60 KQHMPVSSLIIGIDLFPMKPIQGCLTLQEDITTEKCYQSLKK---ELTTWKADVVLHDGA 116
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
PNVG W +A QN LV+ ++KLAT+FL G FVTK+FRS+DY+S+++ L+QLF++V
Sbjct: 117 PNVGQNWIYDAFIQNQLVLSALKLATEFLVKGGWFVTKIFRSKDYNSLMWVLRQLFKRVH 176
Query: 181 VDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGT----KQ 236
KP ASR SAEI+++ Y+AP K+DP+ LD K++FQ E + + + G K
Sbjct: 177 STKPHASRMESAEIFVICQGYRAPDKLDPKFLDPKHVFQ---EVENISNTVMGLQAHEKS 233
Query: 237 KRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVK 296
K GYE+G T+L K + +DF+ N ++IL + T + DP I +H LTT E+K
Sbjct: 234 KPKAGGYEEGITSLHKSAQISDFVHKENFVDILNNATVLNMNDP---EIANHPLTTIEIK 290
Query: 297 ALCDDLRVLGKQDFKHLLKWRMQIKKAF-SSAEKATVPASASAPTEGENEEDAD------ 349
C D++VLG++D K LL WR I+K+ AE+ + +AS EEDA
Sbjct: 291 ECCKDIKVLGRKDLKALLGWRKAIQKSLDDKAEQLKLEENASIEKPVPMEEDACSDDEED 350
Query: 350 -NRVLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQI--DVMQDDYTDHELFSL 406
++V +++EL+ A Q KR+KK L +R K + + M I D LF+L
Sbjct: 351 LSQVERQIKELEDAKVQDAKRKKKKLMNERRKLQEKMRLKMVIPGDGGPSVLEAKPLFAL 410
Query: 407 SSIKGKKDLAAVEYDDD-DVNAAAEDSEDE 435
IK + +++ ++N A+ DE
Sbjct: 411 DQIKTDQACIFNRFNNQTELNQIADQEADE 440
>gi|406866934|gb|EKD19973.1| Spb1 domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 827
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 160/337 (47%), Positives = 228/337 (67%), Gaps = 11/337 (3%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K+ FL S +LDLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
VGSL++G+DL PI I +S + DIT +CRA ++ + D VLHDG+PNVG
Sbjct: 68 VGSLIVGVDLSPIKAIPRVISFQSDITTDKCRATIRSHFKTWKA---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q++ +Q LV+ ++KLAT+FL GTFVTKVFRS+DY+S+L+ QLF KVE KP
Sbjct: 125 AWVQDSFNQAELVLQAMKLATEFLVEGGTFVTKVFRSKDYNSLLWVFNQLFAKVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ YKAP +IDP+ LD K +F P V +KR RDGY
Sbjct: 185 SSRNVSAEIFVVCRGYKAPKRIDPKFLDPKSVFAELSDPTPNNEAKVFNPEIKKRKRDGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+G+ T K A++FI + +P+ ILG ++ ++F GD A +AI TTE+++
Sbjct: 245 EEGNYTQFKEVTASEFIQTTDPIAILGGMSRLSFQQPPNGDVALAAIDKLPETTEDIRVA 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSA-EKATVPA 334
C D+RVLG+++F+ LLKWR+++++ F A +K+ PA
Sbjct: 305 CADIRVLGRKEFRMLLKWRLKVRELFGLATKKSKAPA 341
>gi|443918328|gb|ELU38835.1| rRNA METHYL-TRANSFERASE [Rhizoctonia solani AG-1 IA]
Length = 860
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 170/374 (45%), Positives = 240/374 (64%), Gaps = 24/374 (6%)
Query: 1 MGKVK---GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWM 57
MGK + GK RLDKYY+L GYR+R+++KL+QL+ K++FL S+ +DLCAAPGGW+
Sbjct: 1 MGKTQKKTGKGRLDKYYKL---QGYRARSAFKLIQLNKKYAFLESARCCIDLCAAPGGWL 57
Query: 58 QVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117
QVA + +PV SL++G+DLVPI PI V+ QDIT CRA+++ +++ D+VLH
Sbjct: 58 QVASKTMPVNSLIVGVDLVPIRPIPRVVTFAQDITTSACRAQLRNELKDWKA---DVVLH 114
Query: 118 DGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFE 177
DG+PNVG AW Q+A SQ+ LV+ S+KLA +FL+P GTFVTKVFRS DY+++++ QLF
Sbjct: 115 DGAPNVGTAWVQDAYSQSELVLMSLKLAVEFLSPGGTFVTKVFRSVDYNNLVWVFNQLFG 174
Query: 178 KVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVV------- 228
KVE KP +SR+ SAEI+++ Y AP IDP+ LD K++F+ +V P
Sbjct: 175 KVEATKPPSSRNVSAEIFVVCQGYLAPQHIDPKFLDPKHVFKDVTAVPPIPSTSRIAAQP 234
Query: 229 ------DVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPAC 282
+V + K++R RDGY DGD TL A++ + S++P+ ILGS ITF
Sbjct: 235 GSKAHNNVFQPEKKRRARDGYADGDYTLFHAIGASELVHSHDPVTILGSSNQITFKTDEE 294
Query: 283 SAIKDHELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEG 342
HELTT E+ A C+DL+VLGK DFK LLKWR+ I++ K A+ E
Sbjct: 295 KEWLKHELTTPEILANCEDLKVLGKGDFKRLLKWRIAIREEIGLETKNKPVEDATETVEI 354
Query: 343 ENEEDADNRVLNEM 356
E D + ++ +E+
Sbjct: 355 SEEVDEEQQIEDEV 368
>gi|353240472|emb|CCA72340.1| probable SPB1-required for ribosome synthesis, putative methylase
[Piriformospora indica DSM 11827]
Length = 1111
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 204/505 (40%), Positives = 295/505 (58%), Gaps = 45/505 (8%)
Query: 1 MGKVK---GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWM 57
MGK + GK RLDK+Y+LAKE GYR+R+++KL+QL+ K++FL S+ +DLCAAPGGW+
Sbjct: 1 MGKAQKKTGKGRLDKFYKLAKEQGYRARSAFKLIQLNKKYNFLESARCCIDLCAAPGGWL 60
Query: 58 QVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117
QVA + +P S+++G+DLVPI PI + DIT CR+ ++ +++ D+VLH
Sbjct: 61 QVASKYMPPNSIIVGVDLVPIKPIPRVTTFAADITTSNCRSLLRGELKDWKA---DVVLH 117
Query: 118 DGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFE 177
DG+PNVG AW Q+A SQ LV+ S++LA +FL GTFVTKVFRS DY+++++ +QLF
Sbjct: 118 DGAPNVGTAWIQDAYSQAELVLMSLRLAVEFLIKGGTFVTKVFRSTDYNNLIWVFQQLFA 177
Query: 178 KVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGT--- 234
KVE KP ASR+ SAEI+++ ++ AP IDP+ LD K++F+ + P + +GT
Sbjct: 178 KVEATKPPASRNVSAEIFVVCREFHAPKYIDPKFLDPKHVFK-ELAPESTGGIDKGTSAN 236
Query: 235 ----------KQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFG--DPAC 282
K++R RDGY++GD TL K A DF++ + L LG+ ITF D
Sbjct: 237 NVHANVFMPDKKRRKRDGYDEGDYTLYKTISAKDFVYG-DALTQLGTANRITFDKKDEEE 295
Query: 283 SAIKDHELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPA--SASAPT 340
A E+TT+EV A C+DL+VLGK DFK L+KWR I + T PA
Sbjct: 296 GAWLKSEITTKEVLANCEDLKVLGKGDFKALMKWRAAI-----GLDVKTKPAEELTETVE 350
Query: 341 EGENEEDADNRVLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGM--QIDVMQD-- 396
E E D D ++ E+E L + KR+K+ +K+ K R M +D+ Q+
Sbjct: 351 VVEEEVDEDEQMQEELERLSKEAAAKAKRDKRRANEKKTKTIQRMQLRMVAPMDIGQELV 410
Query: 397 ----DYTDHELFSLSSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSD 452
Y ++F LS++ K+ + D+ + + DSED T+E +DSD
Sbjct: 411 DDSLQYGQEDMFDLSTVDRKRKTLLTKADES--SDSGTDSEDG--GESTEE---DGLDSD 463
Query: 453 EERRKYDEQLEEVLDQAYENYVAKR 477
EER + LE+ LD YE Y KR
Sbjct: 464 EERERRIGALEDDLDGLYEAYKEKR 488
>gi|345568491|gb|EGX51385.1| hypothetical protein AOL_s00054g455 [Arthrobotrys oligospora ATCC
24927]
Length = 853
Score = 326 bits (835), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 155/324 (47%), Positives = 219/324 (67%), Gaps = 8/324 (2%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE YR+R+++KL+QL+ K+ FL+ S ++DLCAAPGGW+QVA + +P
Sbjct: 8 GKGRLDKWYKLAKEKNYRARSAFKLIQLNQKYGFLQKSRVLIDLCAAPGGWLQVAAENMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
SL++G+DL PI PI ++ DIT +CR+ +++ ++ D VLHDG+PNVG
Sbjct: 68 NSSLIVGVDLSPIKPIPKVITFVSDITTDKCRSTLRQHLKTWKA---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A +Q L + S+KLAT+FLA GTFVTK+FRS+DY+S+L+ QLF+KVE KP
Sbjct: 125 AWVQDAFTQAELALQSLKLATEFLAEGGTFVTKIFRSKDYNSLLWVFNQLFKKVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ Y AP ++DP+ LD K +F+ P V K+KR RDGY
Sbjct: 185 SSRNVSAEIFVVCRGYLAPKRVDPKFLDPKTVFEELPDATPNNEAKVYNPEKKKRKRDGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDP---ACSAIKDHELTTEEVKALCD 300
E+GD L K +FI + +P+ +LGS+ TF D A + I TT E++ CD
Sbjct: 245 EEGDNLLYKEIPVKEFIETTDPIALLGSMNKFTFTDTNDIATATITRLPETTPEIRKCCD 304
Query: 301 DLRVLGKQDFKHLLKWRMQIKKAF 324
DLRVLG++DFK LLKWR+ I+ F
Sbjct: 305 DLRVLGRRDFKILLKWRLAIRDKF 328
>gi|116206520|ref|XP_001229069.1| hypothetical protein CHGG_02553 [Chaetomium globosum CBS 148.51]
gi|88183150|gb|EAQ90618.1| hypothetical protein CHGG_02553 [Chaetomium globosum CBS 148.51]
Length = 754
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 162/351 (46%), Positives = 230/351 (65%), Gaps = 13/351 (3%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K+ FL S VLDLCAAPG W QV + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVVLDLCAAPGSWCQVCAETMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
S+++G+DL PI PI ++ + DIT +CRA ++ ++ D VLHDG+PNVG
Sbjct: 68 KDSIIVGVDLAPIKPIPKVITFQSDITTEKCRATIRTHLKTWKA---DCVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q++ +Q L + S+KLAT+FL GTFVTKVFRS+DY+S+L+ L QLF KV KP
Sbjct: 125 AWVQDSYNQAELALHSLKLATEFLIEGGTFVTKVFRSKDYNSLLWVLNQLFTKVHATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVE--PRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ + +KAP +IDPRLLD + +F+ + P V +KR R+GY
Sbjct: 185 SSRNVSAEIFVVCLGFKAPKRIDPRLLDPRSVFEDLADPAPNNEAKVYNPEVKKRKREGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD T K A++FI + +P+ ILG +TF GD A +A+ TTEE++
Sbjct: 245 EEGDYTQYKEIAASEFIQTIDPIAILGQYNRLTFEQPKNGDVALAALDKLPETTEEIRLC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASAS---APTEGENEE 346
C DL+VLG+++FK LLKWR+++++ F K T S A E +EE
Sbjct: 305 CADLKVLGRKEFKLLLKWRLKVREIFGFPTKKTTKTPLSEEVAEVENMDEE 355
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 101/167 (60%), Gaps = 10/167 (5%)
Query: 637 EILACAKKMLR-KKQREQILDDAYNRYMFDD-DGLPDWFLEEERRHRQAIRPVTKEEIAA 694
E + A ++ R +K I+D+ YN++ F D DGLPDWFL++E +H + +P++KE AA
Sbjct: 579 EAMTLAHQLARGEKSTYDIIDEGYNKHAFKDRDGLPDWFLDDEGQHDKPHKPISKEAAAA 638
Query: 695 MKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLY 754
+K + + +ARP KKVAEA+ARKK +KLEK++KKA++++ +S++ K I +L
Sbjct: 639 IKEKLRAYNARPIKKVAEARARKKFKQAQKLEKLKKKADLLAGDEGMSEKEKASSIAKLM 698
Query: 755 KSAVPKRPKKEYVVAKKGVQVRAGKGKV--------LVDPRMKKDSR 793
+A K+ K V K R G+ +VDPRMKK+ R
Sbjct: 699 SAAGRKKRKAPVKVVKAAGMNRGLSGRPKGVKGRYKMVDPRMKKEMR 745
>gi|440640705|gb|ELR10624.1| hypothetical protein GMDG_04893 [Geomyces destructans 20631-21]
Length = 838
Score = 325 bits (832), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 155/334 (46%), Positives = 224/334 (67%), Gaps = 10/334 (2%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K+ FL S +LDLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWSQVAAECMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V SL++G+DL PI I ++ + DIT +CRA ++ + D VLHDG+PNVG
Sbjct: 68 VNSLIVGVDLSPIKTIPRVITFQGDITTDKCRATIRSHFKTWKA---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q++ +Q L + S+KLAT+FL GTFVTKVFRS+DY+S+L+ QLF KVE KP
Sbjct: 125 AWVQDSFNQAELALQSMKLATEFLVEGGTFVTKVFRSKDYNSLLWVFNQLFTKVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ +KAP +IDP+ LD K++F P V +KR RDGY
Sbjct: 185 SSRNVSAEIFVVCQGFKAPKRIDPKFLDPKFVFAELADPTPNNEAKVFNPEIKKRKRDGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+G+ T K A++FI + +P+ +LGS+ +F GD A +A+ T EE++
Sbjct: 245 EEGNYTQFKEVPASEFIQTTDPIAMLGSLNRFSFDQPPNGDVALAALDKMPETIEEIRDC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATV 332
C DLRVLG+++F++LLKWR+++++ F A K ++
Sbjct: 305 CKDLRVLGRKEFRNLLKWRLKVREKFGFATKKSI 338
>gi|393244661|gb|EJD52173.1| FtsJ-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 879
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 156/332 (46%), Positives = 225/332 (67%), Gaps = 14/332 (4%)
Query: 1 MGKVK---GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWM 57
MGK + GK R+DKYY+LAKE G+R+R+++KL+QL+ K+ FL + +DLCAAPGGW+
Sbjct: 1 MGKQQKKTGKGRIDKYYKLAKEQGFRARSAFKLIQLNKKYGFLEHARCCIDLCAAPGGWL 60
Query: 58 QVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117
QVA + +PV SL++G+DLVPI PI V+ DIT +CR +++ +++ D+VLH
Sbjct: 61 QVASKYMPVNSLIVGVDLVPIKPIPRVVTFASDITTTQCRNQLRAELKDWKA---DVVLH 117
Query: 118 DGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFE 177
DG+PNVG AW Q+A SQ+ LV+ S+KLA +FL GTF+TKVFRS DY+S+++ QLF
Sbjct: 118 DGAPNVGTAWIQDAYSQSELVLMSLKLAVEFLRKDGTFITKVFRSTDYNSLIWVFSQLFG 177
Query: 178 KVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF--------QGSVEPRKVVD 229
KVE KP +SR+ SAEI+++ ++ AP IDP+ LD K++F +G+ +
Sbjct: 178 KVEATKPPSSRNVSAEIFVVCREFLAPKTIDPKFLDPKHVFKELGAAAGKGTSAGNVQEN 237
Query: 230 VLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHE 289
V + K++R R+GY DGD TL K A +F+ + +P+ +LG+V I F E
Sbjct: 238 VFQPEKKRRQREGYADGDYTLFKQCNAAEFVRAPDPIAVLGTVNKIVFNTDEEKEWLQSE 297
Query: 290 LTTEEVKALCDDLRVLGKQDFKHLLKWRMQIK 321
LTT+E+K CDDL+VLGK DFK LLKWR+ ++
Sbjct: 298 LTTDEIKLCCDDLKVLGKGDFKALLKWRITLR 329
>gi|328876585|gb|EGG24948.1| rRNA methyltransferase [Dictyostelium fasciculatum]
Length = 873
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 159/328 (48%), Positives = 227/328 (69%), Gaps = 10/328 (3%)
Query: 1 MGKVK---GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWM 57
MG+ K K RLDK+Y LAKE G+RSRA++KL+QL+ K++FL S+ A LDLCAAPGGWM
Sbjct: 1 MGQKKKKLAKGRLDKFYYLAKEQGFRSRAAFKLIQLNKKYNFLGSAKACLDLCAAPGGWM 60
Query: 58 QVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117
QVA + +P S+++G+DL PI PIR + L++DIT +CRA +KK ++ V D+ LH
Sbjct: 61 QVASKYMPAQSVIVGVDLDPIRPIRNCIGLQEDITTAKCRAEIKKALKTWKV---DICLH 117
Query: 118 DGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFE 177
DG+PN+G +W Q+A Q L + ++KLAT+FL G FVTKVFR DY+S+++ QLF+
Sbjct: 118 DGAPNMGTSWIQDAFQQAELTLHALKLATEFLTAGGWFVTKVFRGPDYNSLMWVFHQLFK 177
Query: 178 KVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF---QGSVEPRKVVDVLRGT 234
KV+ KP ASR+ASAEI+++ + AP K+DP+LLD K++F + VE R V+ ++
Sbjct: 178 KVDSTKPQASRNASAEIFVVCQGFLAPKKLDPKLLDPKHVFKEAETKVEARDVLKEIKIG 237
Query: 235 KQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEE 294
K+ RHRDGYED + LR + D I +N+ L++LG S+ + D +DH LTT+E
Sbjct: 238 KKIRHRDGYEDDASDLRSIGRVKDLIEANDHLQMLGKYWSLQW-DVESKIYEDHPLTTKE 296
Query: 295 VKALCDDLRVLGKQDFKHLLKWRMQIKK 322
+K DL+VLGK DFK L+KW+ ++ K
Sbjct: 297 IKECLADLKVLGKTDFKKLIKWKQEMYK 324
>gi|398390652|ref|XP_003848786.1| hypothetical protein MYCGRDRAFT_87701 [Zymoseptoria tritici IPO323]
gi|339468662|gb|EGP83762.1| hypothetical protein MYCGRDRAFT_87701 [Zymoseptoria tritici IPO323]
Length = 805
Score = 322 bits (825), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 160/333 (48%), Positives = 225/333 (67%), Gaps = 10/333 (3%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDKYY LAKE GYR+RA++KL+QL+ K+SFL+++ ++DLCAAPG W+QVA + +P
Sbjct: 8 GKGRLDKYYYLAKEKGYRARAAFKLIQLNKKYSFLQNAKCLIDLCAAPGSWLQVAAEIMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
SL++G+DL PI PI A++ + DIT + RA ++ ++ D V+HDG+PNVG
Sbjct: 68 QKSLIVGVDLAPIKPIPKAITFQGDITTDKTRAIIRGHLKTWKA---DCVIHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A SQN LV+ S+KLAT+FLAP GTFVTKVFRS+D + + + KQLF KVE KP
Sbjct: 125 AWVQDAFSQNELVLCSLKLATEFLAPNGTFVTKVFRSKDSAKLEWIFKQLFAKVEQTKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVE--PRKVVDVLRGTKQKRHRDGY 243
+SR+ SAE + + YKAP +DPR LD ++ F E P V +KR RDGY
Sbjct: 185 SSRNVSAETFYVCRGYKAPKHLDPRFLDPQHAFSEIEESAPNNEAKVFNPEIKKRKRDGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD T K A++FI +N+P+ +LGS+ + F GD A +A+ TT+EV+
Sbjct: 245 EEGDWTQFKECSASEFIQTNDPIAVLGSMNKLHFRQEANGDIAQAALDKLPETTDEVRIC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKAT 331
C+DL+VLG+++FK LL+WR++ + F K T
Sbjct: 305 CEDLKVLGRKEFKTLLRWRLKARDIFGMRVKKT 337
>gi|348675775|gb|EGZ15593.1| hypothetical protein PHYSODRAFT_561340 [Phytophthora sojae]
Length = 883
Score = 322 bits (824), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 200/520 (38%), Positives = 303/520 (58%), Gaps = 36/520 (6%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
KH DKYY LA++ GYR+R+++KL+QL+ K+ FL ++ +DLCAAPGGW QVA + +P
Sbjct: 6 KHDKDKYYNLARQQGYRARSAFKLIQLNKKYDFLSTAKVCIDLCAAPGGWCQVAAKYMPA 65
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
S++LG+DL+PI PIRG + + DIT CR +K+ M+ D+VL DG+PNVG
Sbjct: 66 SSIILGIDLLPIRPIRGVKTFQCDITTTRCRQIIKQEMQSWQA---DVVLCDGAPNVGAE 122
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
++++A QN L + ++KLA + GTFV+KVFRSQDY+++L+ KQLF+KV KP +
Sbjct: 123 YSKDAYVQNELALVALKLAVDVMGRGGTFVSKVFRSQDYNALLWVFKQLFKKVSATKPLS 182
Query: 187 SRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVL--RGTKQKRHRDGYE 244
SR+ SAEI+++ ++ AP IDP+L D KY+F K + + + +KRHR+GY+
Sbjct: 183 SRNESAEIFVVCEQFLAPHSIDPKLFDPKYVFDQVDAQEKTITIFHPKFGDRKRHREGYD 242
Query: 245 DG-DTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLR 303
+ TL T FI +++P+ +L T I F P +DH+ T++E+ DL+
Sbjct: 243 EALGMTLTNECSVTQFIDAHDPIRLLTDTTKIKFL-PEDDVYRDHKDTSDEIVTCLSDLK 301
Query: 304 VLGKQDFKHLLKWR---MQIKKAFSSAEK------ATVPASASAPTEGE-NEEDADNRVL 353
VLGK DFK+LLKWR ++ KK AEK P S E E E++ D V
Sbjct: 302 VLGKADFKNLLKWRTRMLKYKKELLKAEKPEDDDEGEKPKEESKEPERELTEKEKDALVR 361
Query: 354 NEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHE-LFSLSSIKGK 412
E+ +L+ + +KKREKK +++ K + R A GM + + D T+ E FSL +K
Sbjct: 362 EELSQLRATVQAKKKREKKKERERKQKLRIRAALGMDAEGI--DVTEAESAFSLKDLKMS 419
Query: 413 KDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYEN 472
KD + DD D N A+ S+DE +T + D ++ +YDE LE +++AYE
Sbjct: 420 KD----KVDDLD-NVGADSSDDEELQFETSDEEDQDAGLEDSDAEYDELLEASMEKAYEQ 474
Query: 473 YVAKRGGSTMQRKRAKK-----------AYAQEDQLSEGD 501
++ +RG RK K+ A Q+ ++ +GD
Sbjct: 475 FLTRRGDDVKTRKAVKRTKVAKRALAGEALVQDSEMFDGD 514
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 114/201 (56%), Gaps = 14/201 (6%)
Query: 608 FEIV-----PAPGADSSDDSSSDESEDEEVDT--KAEILACAKKMLRKKQREQILDDAYN 660
FE+V P A D +S+ EE D +A+ LA A M++K + + ++D +YN
Sbjct: 670 FEVVAAGEEPDENALPVMDDRKYDSDHEEYDAEDRAKTLALASMMVQKSKAKDLIDASYN 729
Query: 661 RYMFDD-DGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKR 719
RY ++D + LPDWF ++E +H + P+ K +A MK +F E+ +P KKV EA+ RK+R
Sbjct: 730 RYAWNDSEALPDWFADDEEKHYRPQIPIPKNVLAQMKERFMEMATKPVKKVGEARGRKQR 789
Query: 720 VAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKEYVVAKK------GV 773
+ M+KL+ +KKA I++ D+S R K K I++ K A ++ K YVV+ + G
Sbjct: 790 LQMKKLKAAKKKATDIANLPDMSTREKLKAIDRAMKGAKLRKESKVYVVSTRGGTKTAGG 849
Query: 774 QVRAGKGKVLVDPRMKKDSRT 794
+ LVDPRMK D R
Sbjct: 850 KKAGKGKVKLVDPRMKSDKRN 870
>gi|403488644|gb|AFR45304.1| FtsJ-like methyltransferase family protein, partial [Musa acuminata
AAA Group]
Length = 365
Score = 322 bits (824), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 211/376 (56%), Positives = 269/376 (71%), Gaps = 27/376 (7%)
Query: 458 YDEQLEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQED-QLSEGD------EDEDTMHTS 510
YD QLEE+LD+AYE YV ++GG+T ++KRAK+ A D + EGD +DE H S
Sbjct: 1 YDAQLEEMLDEAYERYVIRKGGNTKKQKRAKRDTASNDVDILEGDNGDGLVDDEIDQHLS 60
Query: 511 YDSDKDQGDLDANPLMVPLDDGIRPTQEEITNKWFSQEIFAEAVQNGDLGKLGSEDETQV 570
++NPL+VPLD+ +PT E++ +WFSQ++F EA + K SEDE
Sbjct: 61 AK--------ESNPLVVPLDEDEQPTTEQLVERWFSQDVFTEAPTDDAFEKSDSEDE--- 109
Query: 571 DKQAEKHSIPEKAKQKM--ANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESE 628
K+ + +P K++ M + D P S + E DFEIVPA ++SDDSSS E
Sbjct: 110 -KEEKFVKVPAKSEGNMKQSKDLTLPISKKPE----EDDFEIVPAERMETSDDSSSSSDE 164
Query: 629 DEEVDT--KAEILACAKKMLRKKQREQILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRP 686
EE+D KAEILA AKKMLRKKQREQILDDAYN+YMFDD+GLP WF +EE++H Q +P
Sbjct: 165 SEEMDDDSKAEILAYAKKMLRKKQREQILDDAYNKYMFDDEGLPKWFADEEKQHCQPTKP 224
Query: 687 VTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSK 746
+T+EE+AAM+AQF+EIDARPAKKVAEAKARKKR AMRKLEKVR+KAN I+DQ DIS+RSK
Sbjct: 225 ITREEVAAMRAQFREIDARPAKKVAEAKARKKRAAMRKLEKVRQKANTIADQTDISERSK 284
Query: 747 RKQIEQLYKSAVPKRPKKEYVVAKKGVQVRAGKGKVLVDPRMKKDSRTHGSGKARKGGSK 806
K I++LYK A+PK+PKKEYVVAKKGV+++ GKGKVLVD RMKKD+R+ G+G+ KGG K
Sbjct: 285 GKMIDRLYKKAMPKKPKKEYVVAKKGVRMKGGKGKVLVDRRMKKDARSRGTGRPGKGGLK 344
Query: 807 KGNIGKARKGKGSVKA 822
KG +KG+ KA
Sbjct: 345 KGKGANGQKGQKGQKA 360
>gi|403412291|emb|CCL98991.1| predicted protein [Fibroporia radiculosa]
Length = 888
Score = 322 bits (824), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 161/346 (46%), Positives = 228/346 (65%), Gaps = 16/346 (4%)
Query: 1 MGKVK---GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWM 57
MGK + GK RLDKYY+LAKE GYR+R+++KL+QL+ K+SFL S+ +DLCAAPGGW+
Sbjct: 1 MGKAQKKTGKGRLDKYYKLAKEQGYRARSAFKLIQLNKKYSFLESARCCIDLCAAPGGWL 60
Query: 58 QVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117
QVA + +PV S+++G+DLV I PI ++ DIT P+CR ++ +++ D+VLH
Sbjct: 61 QVASKYMPVNSVIVGVDLVSIKPIPHVITFASDITTPQCRNLIRAELKDWKA---DVVLH 117
Query: 118 DGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFE 177
DG+PNVG AW Q+A Q+ LV+ S+KLA +FL GTFVTKVFRS DY+++++ QLF
Sbjct: 118 DGAPNVGTAWVQDAYGQSELVLMSMKLAAEFLIKGGTFVTKVFRSVDYNNLIWVFNQLFG 177
Query: 178 KVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQG-SVEP--------RKVV 228
KVE KP +SR+ SAEI+++ + AP IDP+ D K++F+ SV V
Sbjct: 178 KVEATKPPSSRNVSAEIFVVCRDFLAPKHIDPKFFDPKHVFKDLSVSASTSELSSKNHQV 237
Query: 229 DVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDH 288
V + K++RHRDGY+DGD L K + A +FI S +P+ +LGSV ITF
Sbjct: 238 TVFQPEKKRRHRDGYDDGDYILFKKTGAAEFIRSQDPIAVLGSVNKITFETEEEKDWLKL 297
Query: 289 ELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPA 334
++TT ++ C DL+VLGK DFK LLKWR +++ E T+P+
Sbjct: 298 DITTSDITENCGDLKVLGKGDFKALLKWRTSLREEV-GLEVKTMPS 342
>gi|164656501|ref|XP_001729378.1| hypothetical protein MGL_3413 [Malassezia globosa CBS 7966]
gi|159103269|gb|EDP42164.1| hypothetical protein MGL_3413 [Malassezia globosa CBS 7966]
Length = 902
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 159/373 (42%), Positives = 240/373 (64%), Gaps = 18/373 (4%)
Query: 1 MGKVK---GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWM 57
MGK + GK RLDK+Y LAKE GYRSRA++KLVQL+ K++FL ++H +DLCAAPGGW+
Sbjct: 1 MGKHEKKAGKGRLDKFYWLAKEQGYRSRAAFKLVQLNKKYNFLENAHCCIDLCAAPGGWL 60
Query: 58 QVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117
QVA + +P SL+LG+DLV I PI ++ +DI CR ++++ M++ D+VLH
Sbjct: 61 QVASKHMPPNSLILGVDLVAIKPIPRCITFAEDINSYRCREQLQEHMKDWKA---DVVLH 117
Query: 118 DGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFE 177
DG+PNVG AW Q+A +QN L + S++LA +FL P GTFVTKVFRS+DY+++++ +QLF
Sbjct: 118 DGAPNVGTAWVQDAYAQNELTLQSLRLAVEFLVPGGTFVTKVFRSKDYNNLMWVFQQLFH 177
Query: 178 KVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ----------GSVEPRKV 227
VE KP +SR+ SAEI+++ ++K ++IDP+ LD +Y+F+ G+ +
Sbjct: 178 HVEATKPPSSRNVSAEIFVVCQRFKNLSRIDPKFLDPRYVFKELDPSGKDLLGTSSQNLL 237
Query: 228 VDVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKD 287
+VL K +R R+GYE+G+ TL K A +I + + +LG+ ITF
Sbjct: 238 ENVLNPEKSRRKREGYEEGNYTLYKTIGADAYIRGADAVAMLGTYNRITFDTDVDKTYLQ 297
Query: 288 HELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGE--NE 345
H T +++KA C+DL+VLG++DF L+KWR ++++ + + S + E E NE
Sbjct: 298 HPATNDDIKANCEDLKVLGRRDFSSLMKWRKAVRQSMNLDARPDKTESHNVTVEMEPLNE 357
Query: 346 EDADNRVLNEMEE 358
EDA + L + E
Sbjct: 358 EDAMDEELARLNE 370
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 113/174 (64%), Gaps = 10/174 (5%)
Query: 636 AEILACAKKML-RKKQREQILDDAYNRYMFDD-DGLPDWFLEEERRHRQAIRPVTKEEIA 693
AE ++ A ++ R+ + +++ +NR+ F+D GLP+WFLE+E +H + P++KE +
Sbjct: 726 AEAVSMAHALVNRQMTKTDLVNQGFNRHSFNDKSGLPEWFLEDENKHYKTNIPLSKEAVE 785
Query: 694 AMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQL 753
A++A+ + +DARP KKVAEAKARKK A +LE+ +KKA I++ AD+S+R K + I ++
Sbjct: 786 ALRARQRALDARPIKKVAEAKARKKHRAAMRLERAQKKAEAINENADLSEREKAENISKI 845
Query: 754 YKSAVPKRPKK--EYVVAK---KGVQVR-AG-KGKV-LVDPRMKKDSRTHGSGK 799
+ K KK + VVA+ +G++ R AG KG+ +VD RMKK+ R K
Sbjct: 846 IARSGQKTEKKAPQLVVARGPNRGIKGRPAGTKGRYRMVDRRMKKELRAQSKSK 899
>gi|300121815|emb|CBK22389.2| unnamed protein product [Blastocystis hominis]
Length = 840
Score = 318 bits (815), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 184/454 (40%), Positives = 279/454 (61%), Gaps = 39/454 (8%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
DK+Y LAK+ GYR+R+++KL+QL+ +F+FL +H ++DLCAAPGGW QVA +++P+ S +
Sbjct: 10 DKWYALAKQQGYRARSAFKLIQLNRQFNFLSKAHVLIDLCAAPGGWCQVAAKQMPIESTI 69
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL+PI PI + ++DIT CR +K+ E HG A D+VLHDG+PNVGG W+++
Sbjct: 70 IGVDLLPIKPIHNVKTFQEDITTLSCRDVIKR--ELHGKHA-DVVLHDGAPNVGGGWSKD 126
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
A QN+LV+ S++LA +F+ TFVTKVFRS DY +++Y QLFEKV+ KPAASR+
Sbjct: 127 AFDQNSLVLHSLRLAVEFMTKGATFVTKVFRSADYHALIYIFNQLFEKVQATKPAASRTE 186
Query: 191 SAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRG-TKQKRHRDGY-EDGDT 248
SAEI+++ YKAP+ IDP+ L+ Y F+ P++ V++ +KR R+GY ED
Sbjct: 187 SAEIFVVCQNYKAPSYIDPKFLNPDYAFKHVGAPKQEVNLFASKNPRKRFREGYDEDLGL 246
Query: 249 TLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLRVLGKQ 308
L++V DF+ ++P+ +L + F D +A + LTTEEV+A C DLRVL K
Sbjct: 247 GLKRVISVKDFMTRSDPIRVLSEAHELRF-DEDSAAFLESPLTTEEVRACCSDLRVLNKN 305
Query: 309 DFKHLLKWRMQIKKAFSSAEKATVPASASAPTE------------------GENEEDADN 350
DFK LLKWR+Q+ K EK + S P + E++
Sbjct: 306 DFKMLLKWRLQMLK-----EKKELIQSMQHPAQQIGETGETGEAGETGETGETEEKEEKK 360
Query: 351 RVLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGM-QIDVMQDDYTDHELFSLSSI 409
V +E++E++ + K+RE++ K+ AK++ R+ GM + VM D D ++FS++
Sbjct: 361 SVESELQEVRERIALEKRREERKERKRLAKERKRRLLGMDKTPVM--DLGD-QVFSVT-- 415
Query: 410 KGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQE 443
DL+ VE +D+ AED D+ +T E
Sbjct: 416 ----DLSRVEIKKEDLMKQAEDENDDESMSETGE 445
>gi|452845233|gb|EME47166.1| hypothetical protein DOTSEDRAFT_69207 [Dothistroma septosporum
NZE10]
Length = 844
Score = 318 bits (815), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 168/367 (45%), Positives = 236/367 (64%), Gaps = 15/367 (4%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
K RLDKYY LAKE GYR+RA++KL+QL+ K+SFL+++ ++DLCAAPG W+QVA + +P
Sbjct: 9 KARLDKYYYLAKEKGYRARAAFKLIQLNKKYSFLQNAKCLIDLCAAPGSWLQVAAETMPQ 68
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
SL++G+DL PI PI ++ + DIT +CRA ++ ++ D V+HDG+PNVG A
Sbjct: 69 KSLIVGVDLTPIKPIPKTITFQGDITTDKCRATIRGHLKTWKA---DCVIHDGAPNVGTA 125
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
W Q+A SQN LV+ S+KLAT+FLAP G FVTKVFRS+D S + + KQLF KVE KP +
Sbjct: 126 WVQDAFSQNDLVLSSLKLATEFLAPNGNFVTKVFRSKDSSKLEWIFKQLFSKVEQTKPPS 185
Query: 187 SRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVD--VLRGTKQKRHRDGYE 244
SR+ SAE + + YKAP +DP+ LD Y F + E + ++ V K+KR R+GYE
Sbjct: 186 SRNVSAETFYVCRGYKAPKHLDPKFLDPAYAFMEAAEGKANMEARVFNPEKKKRKREGYE 245
Query: 245 DGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHEL-----TTEEVKALC 299
+GD T K A +FI + +P+++LG F A I L TTEEV+ C
Sbjct: 246 EGDWTQFKECPAYEFIQTQDPIDMLGRYNRFHFETEAGDEIAQAALAKLPDTTEEVRQNC 305
Query: 300 DDLRVLGKQDFKHLLKWRMQIKKAFSSAEK---ATVPASASA-PTEGENEEDADNRVLNE 355
+DL+VLG+++FK LL+WR++ + F +K A A A P EGE E+ V +
Sbjct: 306 EDLKVLGRKEFKVLLRWRLKARDVFGLRQKKEGTHKKAEAKAEPAEGEVGEEV-AMVESM 364
Query: 356 MEELKYA 362
+EL+YA
Sbjct: 365 DDELRYA 371
>gi|307110257|gb|EFN58493.1| hypothetical protein CHLNCDRAFT_19573, partial [Chlorella
variabilis]
Length = 358
Score = 318 bits (815), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 161/302 (53%), Positives = 209/302 (69%), Gaps = 10/302 (3%)
Query: 21 GYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIAP 80
GYRSRAS+KL+QL+ + FL + ++LDLCAAPGGW QVAV+ +PVGSLV+G+DLV I P
Sbjct: 1 GYRSRASFKLIQLNRTYYFLSGARSLLDLCAAPGGWCQVAVKNMPVGSLVIGVDLVAIKP 60
Query: 81 IRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVID 140
IRG +L DIT +CR +KK E G D+VLHDG+PNVGGAWA EA SQ LV++
Sbjct: 61 IRGVKTLVGDITTQKCRQAIKK---ETGGSLIDVVLHDGAPNVGGAWATEAYSQAWLVLE 117
Query: 141 SVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIK 200
++++AT LAPKGTFVTKVFRS+DYS +LY +QLF KVE KP ASRS SAEI+++
Sbjct: 118 ALRMATDVLAPKGTFVTKVFRSKDYSPLLYAFQQLFTKVEATKPVASRSTSAEIFVVCRG 177
Query: 201 YKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRHRDGYEDGDTTLRKVSLATDFI 260
YKAPAKIDPRLLD K+LFQ R + +GY +G +T K A FI
Sbjct: 178 YKAPAKIDPRLLDPKHLFQVGAGGRPGDGR---GPSRCRLEGYAEGLSTTHKALTAGAFI 234
Query: 261 WSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLRVLGKQDFKHLLKWRMQI 320
+NP+E+LG T+I+ + ++ H T EV+ LC DL+VLG+ +FK LL+WR+ +
Sbjct: 235 AGDNPIELLGQYTTISLA----AFVRSHSATDAEVRTLCKDLQVLGRSEFKQLLRWRLLV 290
Query: 321 KK 322
KK
Sbjct: 291 KK 292
>gi|341890345|gb|EGT46280.1| hypothetical protein CAEBREN_16155 [Caenorhabditis brenneri]
Length = 819
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 193/450 (42%), Positives = 275/450 (61%), Gaps = 24/450 (5%)
Query: 1 MGK-VK-GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQ 58
MGK VK GK R DKYY+LAKE GYRSRA++KLVQL+ +F FL S A +DLCAAPGGWMQ
Sbjct: 1 MGKKVKIGKQRRDKYYKLAKEAGYRSRAAFKLVQLNKRFEFLEKSRATVDLCAAPGGWMQ 60
Query: 59 VAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
VA Q +PV SL++G+DL PI PI+ ++L+ DIT E RA +KK E + D VLHD
Sbjct: 61 VASQFMPVSSLIVGVDLAPIKPIKNCIALQGDITTNETRAAIKK---ELKTWSADCVLHD 117
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+PNVG W +A QN L + ++KLATQ L GTFVTKVFRS DYS ++ ++LF++
Sbjct: 118 GAPNVGLNWVHDAFQQNCLTLSALKLATQILRKGGTFVTKVFRSNDYSCLIRVFEKLFKR 177
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQG-----SVEPRKVVDVLRG 233
V V KPAASR SAEI+++ Y+ P K+ P LD K +F +P ++L G
Sbjct: 178 VHVWKPAASRLESAEIFVVCEVYQKPDKVGPEYLDPKKVFANPDGSEGTKPNP-QNLLIG 236
Query: 234 TKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTE 293
++K +GY+ + ATDFI S+ L+ILGS + IT D K+HE TT+
Sbjct: 237 KQKKAKAEGYDTDSLVVHATVKATDFIKSSAYLDILGSASVITLDD---DKWKNHEKTTD 293
Query: 294 EVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGE-NEEDADNRV 352
EVK +D++VLG ++ + LL+WR + + + KA + E + +EE ++R
Sbjct: 294 EVKEYMNDVKVLGPRELRVLLRWRKSMLETIEAERKAAEGEAQEVEIEEDLSEEQLEDRA 353
Query: 353 LNEMEEL--KYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDD---YTDHELFSLS 407
+ E++EL K + D++ +KK +AK + K +++ + D+ D E+F L
Sbjct: 354 MAEIDELIAKASEDEKAALKKKKKKMLKAKARVLKRRELKMIIDGDEGPQAEDQEVFQLK 413
Query: 408 SIKGKKDLAAVEYDDD----DVNAAAEDSE 433
I+ K+LAA+ D + D+N AAEDS+
Sbjct: 414 KIRKAKELAAITKDTEAPNFDMNEAAEDSD 443
>gi|402219812|gb|EJT99884.1| FtsJ-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 881
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 153/330 (46%), Positives = 223/330 (67%), Gaps = 13/330 (3%)
Query: 3 KVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQ 62
K GK RLDKYY+LAKE GYR+R+++KL+QL+ K++FL S+ +DLCAAPGGW+QVA +
Sbjct: 6 KKTGKGRLDKYYKLAKEQGYRARSAFKLIQLNKKYNFLESAKCCIDLCAAPGGWLQVASK 65
Query: 63 RVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPN 122
+PV S+++G+DLVPI I ++ DIT P CR +++ +++ D+VLHDG+PN
Sbjct: 66 YMPVNSVIVGVDLVPIKAIPRVITHAADITTPRCRTLLRESLKDWQA---DVVLHDGAPN 122
Query: 123 VGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVD 182
VG AW Q+A +Q+ LV+ S+KLA +FL GTFVTKVFRS DY+++L+ QLF +VE
Sbjct: 123 VGTAWVQDAYTQSELVLMSLKLAVEFLIKGGTFVTKVFRSADYNNLLWVFNQLFGRVEAT 182
Query: 183 KPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ----------GSVEPRKVVDVLR 232
KP +SR+ SAEI+++ + APAKIDP+ L+ K++F+ ++ +V +
Sbjct: 183 KPPSSRNVSAEIFVVCRDFLAPAKIDPKFLNPKHVFKELSMSKPTENAAMNVNAHENVFQ 242
Query: 233 GTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTT 292
+K++R RDGY +GD TL + A DF+ ++P+ +LG+ ITF + TT
Sbjct: 243 PSKKRRQRDGYAEGDYTLFHSATAEDFVRGDDPITLLGTNNRITFISAEEKSWLKLPCTT 302
Query: 293 EEVKALCDDLRVLGKQDFKHLLKWRMQIKK 322
E+V A C DL+VLGK DFK LLKWR I++
Sbjct: 303 EDVSANCADLKVLGKGDFKALLKWRATIRE 332
>gi|320593636|gb|EFX06045.1| rRNA methyltransferase [Grosmannia clavigera kw1407]
Length = 858
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 157/362 (43%), Positives = 230/362 (63%), Gaps = 10/362 (2%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K+ FL S +LDLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAETMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
S+++G+DL PI I ++ + DIT +CRA +++ ++ D VLHDG+PNVG
Sbjct: 68 ANSIIVGVDLSPIKSIPKVITFQSDITTEKCRATIRQHLKTWKA---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q++ +Q L + ++KLAT FL GTFVTKVFRS+DY+S+L+ QLF KVE KP
Sbjct: 125 AWVQDSFNQAELALQAMKLATDFLIEGGTFVTKVFRSKDYNSLLWVFNQLFTKVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ +KAP +IDPR LD K +F P V +KR RDGY
Sbjct: 185 SSRNVSAEIFVVCRGFKAPKRIDPRFLDPKAVFAELADPTPNNEAKVYNPEVKKRKRDGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD T K A++FI + +P+ ILG ++F GD A +A+ TTEE++
Sbjct: 245 EEGDYTQFKEMPASEFIQTTDPIAILGQYNRLSFEQPKNGDVALAALDKLPETTEEIRLS 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEE 358
C DL+VL +++FK LL+WR+++++ F K T S + D + ++ E++
Sbjct: 305 CADLKVLSRKEFKVLLRWRLRVRELFGFPSKKTAAKPLSEEVTQVDTMDEEMKIQQELQA 364
Query: 359 LK 360
+K
Sbjct: 365 MK 366
>gi|300124014|emb|CBK25285.2| unnamed protein product [Blastocystis hominis]
Length = 840
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 184/454 (40%), Positives = 279/454 (61%), Gaps = 39/454 (8%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
DK+Y LAK+ GYR+R+++KL+QL+ +F+FL +H ++DLCAAPGGW QVA +++P+ S +
Sbjct: 10 DKWYALAKQQGYRARSAFKLIQLNRQFNFLSKAHVLIDLCAAPGGWCQVAAKQMPIESTI 69
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL+PI PI + ++DIT CR +K+ E HG A D+VLHDG+PNVGG W+++
Sbjct: 70 IGVDLLPIKPIHNVKTFQEDITTLSCRDVIKR--ELHGKHA-DVVLHDGAPNVGGGWSKD 126
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
A QN+LV+ S++LA +F+ TFVTKVFRS DY +++Y QLFEKV+ KPAASR+
Sbjct: 127 AFDQNSLVLHSLRLAVEFMTKGATFVTKVFRSADYHALIYIFNQLFEKVQATKPAASRTE 186
Query: 191 SAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRG-TKQKRHRDGY-EDGDT 248
SAEI+++ YKAP+ IDP+ L+ Y F+ P++ V++ +KR R+GY ED
Sbjct: 187 SAEIFVVCQNYKAPSYIDPKFLNPDYAFKQVGAPKQEVNLFASKNPRKRFREGYDEDLGL 246
Query: 249 TLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLRVLGKQ 308
L++V DF+ ++P+ +L + F D +A + LTTEEV+A C DLRVL K
Sbjct: 247 GLKRVISVKDFMTRSDPIRVLSEAHELRF-DEDSAAFLESPLTTEEVRACCSDLRVLNKN 305
Query: 309 DFKHLLKWRMQIKKAFSSAEKATVPASASAPTE------------------GENEEDADN 350
DFK LLKWR+Q+ K EK + S P + E++
Sbjct: 306 DFKMLLKWRLQMLK-----EKKELIQSMQHPAQQIGETGETGEAGETGETGETEEKEEKK 360
Query: 351 RVLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGM-QIDVMQDDYTDHELFSLSSI 409
V +E++E++ + K+RE++ K+ AK++ R+ GM + VM D D ++FS++
Sbjct: 361 SVESELQEVRERIALEKRREERKERKRLAKERKRRLLGMDKTPVM--DLGD-QVFSVT-- 415
Query: 410 KGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQE 443
DL+ VE +D+ AED D+ +T E
Sbjct: 416 ----DLSRVEIKKEDLMKQAEDENDDESMSETGE 445
>gi|326430676|gb|EGD76246.1| FtsJ cell division protein [Salpingoeca sp. ATCC 50818]
Length = 934
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 211/574 (36%), Positives = 315/574 (54%), Gaps = 66/574 (11%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R DK+Y LAKE G R+R+++KL+QL+ ++ FL + +DLCAAPGGWMQVA + +
Sbjct: 8 GKARRDKFYHLAKESGLRARSAFKLLQLNRQYDFLTGASVCIDLCAAPGGWMQVAKEAMT 67
Query: 66 VGS--LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNV 123
S V+G+DLVPI PI+G +S++ DIT CRA+++K M R D+VLHDG+PNV
Sbjct: 68 KNSNTTVIGVDLVPIQPIKGCISIQADITTEHCRAQLRKNMNH---RKADVVLHDGAPNV 124
Query: 124 GGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDK 183
G +W Q+A +Q LV+ S+KLATQFL GTFVTKVFRS+DY +LY +LFEKV K
Sbjct: 125 GTSWIQDAFTQAELVLQSLKLATQFLRKGGTFVTKVFRSRDYPKLLYVFGKLFEKVHATK 184
Query: 184 PAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRK----VVDVLRGTKQKRH 239
P++SR+ SAEI+++ +Y AP +IDPRLLD + +F VEP K V+ K K
Sbjct: 185 PSSSRNVSAEIFVVCQRYVAPHRIDPRLLDSRTVFS-EVEPEKEEPNVLQQKEKKKNKPK 243
Query: 240 RDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALC 299
+GYE+G+ T K +FI +N+ + +L + ++ TF P +K E TT E+KALC
Sbjct: 244 PEGYEEGNYTQYKDVNVDEFIRANDFMTMLSTYSAFTFS-PNSPLLKLPE-TTPEIKALC 301
Query: 300 DDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNE---- 355
+DL++L K+DFK L+KWR +++ + + + + +DA+ +
Sbjct: 302 EDLKLLNKKDFKTLIKWRQKMRGWLRALAEEQIRRDGGDGNDDNKTDDANGNADGDEEES 361
Query: 356 --------MEELKYAMDQRKKREKKLLAKKRAKD--KARKATGMQIDVMQDDYTDH-ELF 404
+ LK A + + + K+ L K+R K K ++ +Q+D Q D+ LF
Sbjct: 362 DEDEDDGLLSALKDAAAKERAKMKR-LRKRRTKMNLKLKERLSLQMDTPQGLTDDNGTLF 420
Query: 405 SLSSIKGKKDLAAVEYDDDDVNAAAEDSEDERP----NRDTQEHVSSDIDSDEERRKYDE 460
L I+ ++ L AV + DD +A D P NR Q + +
Sbjct: 421 DLRGIRSEEQLKAVT-EADDFDALQVPCNDGPPTIACNRLQQGALCN------------- 466
Query: 461 QLEEVLDQAYENYVAKRG---GSTMQRKRAKKAY----AQEDQLSEGDEDEDTMHTSYDS 513
+LEE LDQ Y +Y+ ++ T +KR ++A A D + G+ DED +
Sbjct: 467 ELEEQLDQHYNSYLERKNVKLAETEHKKRIQRALKGDDANADGVEGGESDEDV------A 520
Query: 514 DKDQGDLDANPLMVPLDDGIRPTQEEITNKWFSQ 547
+ GD L + T N+WF+Q
Sbjct: 521 NAGSGD-------TVLVRSHKKTTSAAANRWFAQ 547
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 102/168 (60%), Gaps = 10/168 (5%)
Query: 636 AEILACAKKMLRKKQREQILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAM 695
AE LA A +M+ + +R I+D AYNRY +D LP WF +EE H + ++P+TKE + M
Sbjct: 749 AEGLALATEMVVRNKRRAIIDQAYNRYAHNDGQLPAWFADEENPHMKPMKPITKEMVQQM 808
Query: 696 KAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYK 755
K +E++ARP KKV EAKA++K ++ + KV ++A VI+D +++R K +QIEQLYK
Sbjct: 809 KEYERELNARPIKKVMEAKAKRKHRLVKFMGKVNQQAAVIADNDTLTEREKVRQIEQLYK 868
Query: 756 SAVPKRPKKE---YVVA------KKGVQVRAGKGKV-LVDPRMKKDSR 793
KR + E VVA KK + + G+ +VD RM D R
Sbjct: 869 KLRAKRNQHERTKLVVARRSTASKKPTRPKGVTGRYKMVDRRMLSDKR 916
>gi|296415586|ref|XP_002837467.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633339|emb|CAZ81658.1| unnamed protein product [Tuber melanosporum]
Length = 528
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 159/362 (43%), Positives = 235/362 (64%), Gaps = 10/362 (2%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAK+ GYR+RA++KL+QL+ K++FL S ++DLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYKLAKQKGYRARAAFKLIQLNKKYNFLEKSKVLIDLCAAPGSWCQVAAECMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V SL++G+DL PI I ++ + DIT +CRA ++ ++ D VLHDG+PNVG
Sbjct: 68 VNSLIVGVDLAPIKAIPRVITFQSDITTDKCRATLRGHLKTWKA---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A +Q LV+ S+KLAT+FL GTFVTKVFRS+D++++++ QLF KVE KP
Sbjct: 125 AWVQDAFTQAELVLQSLKLATKFLIEGGTFVTKVFRSRDFNNLMWVFNQLFTKVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SRS SAEI+++ YKAP ++DP+ LD + +F+ P V +KR RDGY
Sbjct: 185 SSRSVSAEIFVVCKGYKAPKRVDPKFLDPRTVFEELPDPTPNNEAKVFNPEIRKRKRDGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD K + FI + +P+++LGS+ ++F GD A +AI TT+E++
Sbjct: 245 EEGDYLQFKEAPVNKFIEATDPIQMLGSLNRLSFEERKGGDLAIAAISKMPETTKEIRYC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEE 358
C+DLRVLGK++F+ LL+WR+ +++ F A K T S D + ++ E+E
Sbjct: 305 CEDLRVLGKKEFRALLRWRLSVREKFGLAVKKTNAMVESTEIAEIVPMDKEIQIEEELER 364
Query: 359 LK 360
LK
Sbjct: 365 LK 366
>gi|336274703|ref|XP_003352105.1| hypothetical protein SMAC_02540 [Sordaria macrospora k-hell]
gi|380092184|emb|CCC09960.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 833
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 155/361 (42%), Positives = 231/361 (63%), Gaps = 10/361 (2%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K+ FL S LDLCAAPG W QV + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVALDLCAAPGSWCQVCAETMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
S+++G+DL PI PI ++ + DIT +CRA ++ ++ D+VLHDG+PNVG
Sbjct: 68 TNSIIIGVDLAPIKPIPKVITFQSDITTEKCRATIRTHLKTWKA---DVVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q++ +Q L + S+KLAT+FL GTFVTKVFRS+DY+S+L+ QLF KVE KP
Sbjct: 125 AWVQDSYNQAELALHSLKLATEFLVEGGTFVTKVFRSKDYNSLLWVCNQLFAKVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ +KAP +IDP+LLD + +F+ P V +KR R+GY
Sbjct: 185 SSRNVSAEIFVVCRGFKAPKRIDPKLLDPRSVFEDVAGPAPNNEAKVYNPEIKKRKREGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+G+ K A++FI + +P+ ILG ++F GD A +A+ TTEE++
Sbjct: 245 EEGEYIQFKEISASEFINTVDPIAILGQYNKLSFEQPKNGDVALAALDKLPETTEEIRLC 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEE 358
C DL+VLG+++FK LLKWR+++++ F K + A+ D + R+ E++
Sbjct: 305 CADLKVLGRKEFKLLLKWRLKVREIFGFPTKKSQKAAVDEEVAVVENMDEELRIQEELQR 364
Query: 359 L 359
+
Sbjct: 365 I 365
>gi|67480103|ref|XP_655413.1| ribosomal RNA methyltransferase [Entamoeba histolytica HM-1:IMSS]
gi|56472547|gb|EAL50027.1| ribosomal RNA methyltransferase, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449703792|gb|EMD44172.1| ribosomal RNA methyltransferase [Entamoeba histolytica KU27]
Length = 829
Score = 316 bits (810), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 258/834 (30%), Positives = 434/834 (52%), Gaps = 82/834 (9%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDKYY LAK++GYR+R+++KLVQ++ ++ FL S+H ++DLCAAPGGW QVA + +P
Sbjct: 8 GKERLDKYYHLAKQYGYRARSAFKLVQMNKRYDFLSSAHILIDLCAAPGGWCQVATKEMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVME-EHGVRAFDLVLHDGSPNVG 124
V S + G+DL PI PI + DIT C A +KK+M+ EH D+VLHDGSPN+G
Sbjct: 68 VESKIFGVDLEPILPIPRCTTYVGDITTGMCFAEMKKLMKGEHA----DVVLHDGSPNMG 123
Query: 125 GAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKP 184
+W Q+A +Q+ L I ++K A FL G F++KVFRSQDY ++L+ ++ F+ V KP
Sbjct: 124 KSWIQDAYTQSELCIAALKFAVTFLKKGGWFISKVFRSQDYYAILFVFEKFFKSVIATKP 183
Query: 185 AASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRHRDGYE 244
ASR+ SAE+YL+ + AP+K DP LLD K++F E +V D+ + K GY+
Sbjct: 184 PASRNTSAEVYLVCKDFLAPSKYDPNLLDPKFVF-AKEEETQVPDLFSTKRPKPQ--GYD 240
Query: 245 DGDTTLRKVSLATDFIWSNNPLEILGSVTSITF--GDPACSAIKDHELTTEEVKALCDDL 302
+ V A +F+ + +P L + T+I F G P TE++K D+
Sbjct: 241 TSKALVYNVGNAKEFLQAEDPKAWLATHTAIQFDEGLP----------VTEDIKGYGSDI 290
Query: 303 RVLGKQDFKHLLKWRMQIKKAFS---------SAEKATVPASASAPTEGENEEDADNRVL 353
R+LG + K LLKWR I K AE+ + TE E + R
Sbjct: 291 RMLGSAELKLLLKWRDIIVKKIKKEQEEADKIKAEEEKMKMEDKILTEQEELQKELEREE 350
Query: 354 NEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSIKGKK 413
E E + A +++ ++K+ KK+ K++ K GM I +LFS+ +K ++
Sbjct: 351 EEEREEEIAKNKKTAKQKRAEEKKKRKEQRIKEGGMDIANSSGYDEVDQLFSIDDLKSQQ 410
Query: 414 DLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRK---YDEQLEEVLDQAY 470
DL D+ N +E + +E ++ +++ER + YD++L+E ++ Y
Sbjct: 411 DL------DNFFNMTNPVELEEEEEQRKKEEEENEKRAEQERLEQMTYDQRLDEQFEREY 464
Query: 471 ENYVAKRGGSTMQRK--RAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDANPLMVP 528
+ ++ +RG + K K++ + L++G D + + +++ ++
Sbjct: 465 KEFLERRGKVKVLAKVGEMKRSVMVQSSLNDG----DIIRQADQKPREE-------VIEE 513
Query: 529 LDDGIRP----TQEEITNK---WFSQEIFAE-AVQNGDLGKLGSEDETQVDKQAEKHSIP 580
+DD + + E NK W+S+ + +VQ G L ++ +D+ + +K K +
Sbjct: 514 IDDVVHQKGILSSEGKNNKEDLWWSRNGMDDISVQMGILEEVLKKDQAKEEKL--KGEVK 571
Query: 581 EKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGA----DSSDDSSSDESEDEEVDT-- 634
+ K + G + S+ E + +V G + ++DS+ D EE D
Sbjct: 572 NEIDDKYEEEVQGEDQVIKEESDKEENEVVVSEDGESDEYEEAEDSNKDNESSEEDDELN 631
Query: 635 ---------KAEILACAKKMLR-KKQREQILDDAYNRYMF-DDDGLPDWFLEEERRHRQA 683
++ L A ++++ KQ++++L+ +R+ +D+ P WF EE H +
Sbjct: 632 WGPHMGKEKLSQALIVAGRIVKDPKQKKRLLEQHISRWTLPEDEDTPAWFRHEEEEHNKL 691
Query: 684 IRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISD 743
P TKEE+AAM+ + +EID+ P KK EA+ARKK+ ++ + ++A+ I +++
Sbjct: 692 TLPETKEEVAAMRRRLREIDSAPIKKAWEAEARKKKKLQTRMRALEQQASKIEGDGEMNS 751
Query: 744 RSKRKQIEQLYKSAVPKRPKKE---YVVAKKGVQVRAGKGKV-LVDPRMKKDSR 793
+ + + + + K K E +V +K G V G++ LVDPRMKK+ R
Sbjct: 752 KEQLRILTKKAKKLNKKFSTHEGVRFVSSKTGKTVGGSSGRMKLVDPRMKKELR 805
>gi|407041022|gb|EKE40480.1| ribosomal RNA large subunit methyltransferase J protein [Entamoeba
nuttalli P19]
Length = 829
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 258/834 (30%), Positives = 433/834 (51%), Gaps = 82/834 (9%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDKYY LAK++GYR+R+++KLVQ++ ++ FL S+H ++DLCAAPGGW QVA + +P
Sbjct: 8 GKERLDKYYHLAKQYGYRARSAFKLVQMNKRYDFLSSAHILIDLCAAPGGWCQVATKEMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVME-EHGVRAFDLVLHDGSPNVG 124
V S + G+DL PI PI + DIT C A +KK+M+ EH D+VLHDGSPN+G
Sbjct: 68 VESKIFGVDLEPILPIPRCTTYVGDITTGMCFAEMKKLMKGEHA----DVVLHDGSPNMG 123
Query: 125 GAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKP 184
+W Q+A +Q+ L I ++K A FL G F++KVFRSQDY ++L+ ++ F+ V KP
Sbjct: 124 KSWIQDAYTQSELCIAALKFAVTFLKKGGWFISKVFRSQDYYAILFVFEKFFKSVIATKP 183
Query: 185 AASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRHRDGYE 244
ASR+ SAE+YL+ + AP+K DP LLD K++F E +V D+ + K GY+
Sbjct: 184 PASRNTSAEVYLVCKDFLAPSKYDPNLLDPKFVF-AKEEETQVPDLFSTKRPKPQ--GYD 240
Query: 245 DGDTTLRKVSLATDFIWSNNPLEILGSVTSITF--GDPACSAIKDHELTTEEVKALCDDL 302
+ V A +F+ + +P L + T+I F G P TE++K D+
Sbjct: 241 TSKALVYNVGNAKEFLQAEDPKAWLATHTAIQFDEGLP----------VTEDIKGYGSDI 290
Query: 303 RVLGKQDFKHLLKWRMQIKKAFS---------SAEKATVPASASAPTEGENEEDADNRVL 353
R+LG + K LLKWR I K AE+ + TE E + R
Sbjct: 291 RMLGSAELKLLLKWRDIIVKKIKKEQEEADKIKAEEEKMKIEDKILTEQEELQKELEREE 350
Query: 354 NEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSIKGKK 413
E E + A +++ ++K+ KK+ K++ K GM I +LFS+ +K ++
Sbjct: 351 EEEREEEIAKNKKTAKQKRAEEKKKRKEQRIKEGGMDIANSSGYDEVDQLFSIDDLKNQQ 410
Query: 414 DLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRK---YDEQLEEVLDQAY 470
DL D+ N +E + +E ++ +++ER + YD++L+E ++ Y
Sbjct: 411 DL------DNFFNMTNPVELEEEEEQRKKEEEENEKRAEQERLEQMTYDQRLDEQFEREY 464
Query: 471 ENYVAKRGGSTMQRK--RAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDANPLMVP 528
+ ++ +RG + K K++ + L++G D + + +++ ++
Sbjct: 465 KEFLERRGKVKVLAKVGEMKRSVMVQSSLNDG----DIIRQADQKPREE-------VIEE 513
Query: 529 LDDGIRP----TQEEITNK---WFSQEIFAE-AVQNGDLGKLGSEDETQVDKQAEKHSIP 580
+DD + + E NK W+S+ + +VQ G L ++ +D Q ++ K +
Sbjct: 514 IDDVVHQKGILSSEGKNNKEDLWWSRNGMDDISVQMGILEEVLKKD--QAKEEQLKGEVK 571
Query: 581 EKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGA----DSSDDSSSDESEDEEVDT-- 634
+ K + G + S+ E + +V G + ++DS+ D EE D
Sbjct: 572 NEIDDKYEEEVQGEDQVIKEDSDKEENEVVVSEDGESDEYEETEDSNKDNESSEEDDELN 631
Query: 635 ---------KAEILACAKKMLR-KKQREQILDDAYNRYMF-DDDGLPDWFLEEERRHRQA 683
++ L A ++++ KQ++++L+ +R+ +D+ P WF EE H +
Sbjct: 632 WGPHMGKEKLSQALIVAGRIVKDPKQKKRLLEQHISRWTLPEDEDTPAWFRHEEEEHNKL 691
Query: 684 IRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISD 743
P TKEE+AAM+ + +EID+ P KK EA+ARKK+ ++ + ++A+ I +++
Sbjct: 692 TLPETKEEVAAMRRRLREIDSAPIKKAWEAEARKKKKLQTRMRALEQQASKIEGDGEMNS 751
Query: 744 RSKRKQIEQLYKSAVPKRPKKE---YVVAKKGVQVRAGKGKV-LVDPRMKKDSR 793
+ + + + + K K E +V +K G V G++ LVDPRMKK+ R
Sbjct: 752 KEQLRILTKKAKKLNKKFSTHEGVRFVSSKTGKTVGGSSGRMKLVDPRMKKELR 805
>gi|340721144|ref|XP_003398985.1| PREDICTED: putative rRNA methyltransferase 3-like isoform 1 [Bombus
terrestris]
Length = 852
Score = 316 bits (809), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 150/324 (46%), Positives = 214/324 (66%), Gaps = 7/324 (2%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R DK+Y+LAKE GYRSRA++KL+Q++ KF FL+ S +DLCAAPGGWMQ+A Q +P
Sbjct: 9 GKQRKDKFYQLAKETGYRSRAAFKLIQINRKFEFLQKSRVCIDLCAAPGGWMQIARQNMP 68
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V S+V+G+DL PI PI G +SL +DIT +CR + + ++ D+VLHDG+PNVG
Sbjct: 69 VSSVVIGVDLFPIKPIPGCISLVEDITTDKCRVSISRELKTWKA---DVVLHDGAPNVGK 125
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
W +A Q L + ++K+AT FL P G F+TKVFRS+DY+++++ LKQLF KV KP
Sbjct: 126 NWLHDAYQQIVLTLAALKMATHFLRPGGWFITKVFRSKDYNALVWVLKQLFRKVHATKPQ 185
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHRDGYE 244
ASR+ SAEI+++ Y AP K+DP+ LD KY+F + +EP ++V K+K +GY
Sbjct: 186 ASRAESAEIFVVCQYYIAPDKLDPKFLDPKYVFSELEIEPTNKLNVCNPAKKKDKVEGYP 245
Query: 245 DGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLRV 304
+ D TL DFI N +E L + + I F D I +HE TT+E+K C D++V
Sbjct: 246 ENDYTLYHKLSVKDFIAHENAVEALQNASEIVFDD---ETIANHEKTTKEIKECCKDIKV 302
Query: 305 LGKQDFKHLLKWRMQIKKAFSSAE 328
LGK+D ++L+ W +K++ E
Sbjct: 303 LGKKDLRNLINWWKVVKESLKEEE 326
>gi|340721146|ref|XP_003398986.1| PREDICTED: putative rRNA methyltransferase 3-like isoform 2 [Bombus
terrestris]
Length = 823
Score = 315 bits (807), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 150/324 (46%), Positives = 214/324 (66%), Gaps = 7/324 (2%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R DK+Y+LAKE GYRSRA++KL+Q++ KF FL+ S +DLCAAPGGWMQ+A Q +P
Sbjct: 9 GKQRKDKFYQLAKETGYRSRAAFKLIQINRKFEFLQKSRVCIDLCAAPGGWMQIARQNMP 68
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V S+V+G+DL PI PI G +SL +DIT +CR + + ++ D+VLHDG+PNVG
Sbjct: 69 VSSVVIGVDLFPIKPIPGCISLVEDITTDKCRVSISRELKTWKA---DVVLHDGAPNVGK 125
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
W +A Q L + ++K+AT FL P G F+TKVFRS+DY+++++ LKQLF KV KP
Sbjct: 126 NWLHDAYQQIVLTLAALKMATHFLRPGGWFITKVFRSKDYNALVWVLKQLFRKVHATKPQ 185
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHRDGYE 244
ASR+ SAEI+++ Y AP K+DP+ LD KY+F + +EP ++V K+K +GY
Sbjct: 186 ASRAESAEIFVVCQYYIAPDKLDPKFLDPKYVFSELEIEPTNKLNVCNPAKKKDKVEGYP 245
Query: 245 DGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLRV 304
+ D TL DFI N +E L + + I F D I +HE TT+E+K C D++V
Sbjct: 246 ENDYTLYHKLSVKDFIAHENAVEALQNASEIVFDD---ETIANHEKTTKEIKECCKDIKV 302
Query: 305 LGKQDFKHLLKWRMQIKKAFSSAE 328
LGK+D ++L+ W +K++ E
Sbjct: 303 LGKKDLRNLINWWKVVKESLKEEE 326
>gi|156058214|ref|XP_001595030.1| hypothetical protein SS1G_03118 [Sclerotinia sclerotiorum 1980]
gi|154700906|gb|EDO00645.1| hypothetical protein SS1G_03118 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 347
Score = 315 bits (807), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 153/326 (46%), Positives = 222/326 (68%), Gaps = 10/326 (3%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K+ FL S +LDLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAETMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V SL++G+DL PI PI ++ + DIT +CRA ++ + D VLHDG+PNVG
Sbjct: 68 VSSLIVGVDLSPIKPIPRVITFQSDITTEKCRATIRTHFKSWKA---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q++ +Q L + S+KLAT+FLAP GTFVTKVFRS+DY+S+L+ QLF KVE KP
Sbjct: 125 AWVQDSFNQAELALQSLKLATEFLAPGGTFVTKVFRSKDYNSLLWVFNQLFTKVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ +KAP +DP+ +D +++F P V +KR RDGY
Sbjct: 185 SSRNVSAEIFVVCQGFKAPKHLDPKFVDPRHVFAELSDPTPNNEAKVFNPEIKKRKRDGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
ED + T K A++FI + +P+ ILGS+ ++F GD A +A+ TT+E++
Sbjct: 245 EDDNMTQFKEIPASEFIQTTDPIAILGSMNRLSFVQPPNGDVALAALDKLPETTDEIRND 304
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAF 324
C DLRVLG+++F++LLKW +++++ F
Sbjct: 305 CADLRVLGRKEFRNLLKWGLKVREKF 330
>gi|321251839|ref|XP_003192196.1| RNA methyltransferase [Cryptococcus gattii WM276]
gi|317458664|gb|ADV20409.1| RNA methyltransferase, putative [Cryptococcus gattii WM276]
Length = 907
Score = 315 bits (807), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 207/549 (37%), Positives = 305/549 (55%), Gaps = 64/549 (11%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+YRLAKE GYR+R+++KLV L+ K+ L + +DLCAAPGGW+QVA + +P
Sbjct: 9 GKGRLDKFYRLAKEQGYRARSAFKLVHLNRKYDLLSKARCCIDLCAAPGGWLQVAEKYMP 68
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
GSL++G+DL I P+ + DIT P CR +++ M H +A DLVLHDG+PNVG
Sbjct: 69 KGSLIIGVDLNAIKPLPHVTTFVSDITTPHCRQTLRQHM--HDWKA-DLVLHDGAPNVGS 125
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A +QN LV+ S+KLAT+FLA G+FVTKVFRSQDY+S+L+ QLF+ VE KP
Sbjct: 126 AWVQDAFTQNELVLQSLKLATEFLAKGGSFVTKVFRSQDYNSLLWVFGQLFKSVEATKPP 185
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ-------GSVEPRKV----------- 227
+SR+ SAEI+++ + AP IDP+ LD K++F+ +EP V
Sbjct: 186 SSRNVSAEIFVVCRDFIAPKHIDPKFLDPKHVFKDIASLPTSIIEPTGVSVAPTSSSTAS 245
Query: 228 ---------------VDVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSV 272
+V K++RHR+GY +GD TL A +F+ +P+ +LG++
Sbjct: 246 AAAAAARLAANSHAHSNVYAPEKKRRHREGYAEGDYTLHHTISAEEFVRGQDPVLLLGNM 305
Query: 273 TSITFGDPACSAIKDHELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKA-- 330
I F A TT ++ A +DL+VLGK DFK L+KWR+ I+ KA
Sbjct: 306 NKIEFRSENEKAWLKSRHTTPDIIANFEDLKVLGKGDFKALMKWRLAIRLEIGLDVKADK 365
Query: 331 TVPASASAPTEGENEEDADNRVLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQ 390
T A+ E +EE+ ++ E+++L+ A + K+EKK +K+A++ + M
Sbjct: 366 TQDATEEVVVEPMDEEE---QITEELQKLQQAKLAKSKKEKKRANEKKARELLKLQLNMT 422
Query: 391 I--DVMQDDYT---DHELFSL------SSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNR 439
+ D+ Q+D + E+F L + +GKK A D N D E
Sbjct: 423 VPDDLDQNDLALQGEEEIFDLEEGENEAKRRGKKGGLAALVD----NGEGMDLSSESEEE 478
Query: 440 DTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQEDQLSE 499
D E +DSDEER + LE LD Y++YV ++ ++R K ++D+L
Sbjct: 479 DEDEEDHEILDSDEERERKTAALEGELDGLYDSYVERK------KERDAKWKVKQDRLK- 531
Query: 500 GDEDEDTMH 508
D++ D H
Sbjct: 532 -DKNFDAWH 539
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/228 (35%), Positives = 129/228 (56%), Gaps = 24/228 (10%)
Query: 602 SEVEGD--FEIVPAPGADSSDDSSSDESEDEEVDTK---------AEILACAKKML-RKK 649
S +EGD FEIVP D + D+ + +EV K AE ++ A ++ RK
Sbjct: 681 STLEGDEDFEIVPQAPEDDGPEWDVDDEDQDEVKKKIIQDKGLLTAEAVSLATALVNRKT 740
Query: 650 QREQILDDAYNRY-MFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAK 708
++++D +NR + DGLP WFL++E + + P+TKE A++A+ + +DARP K
Sbjct: 741 TADKLIDQGFNRLSAHNKDGLPTWFLDDESKFYKPNIPITKEAADALRARQRALDARPIK 800
Query: 709 KVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLY---KSAVPKRPKKE 765
KVAEAK RK+ A+ ++EK +KKA+ + + ++ D K +Q+ ++ K +K+
Sbjct: 801 KVAEAKGRKRMKAVARMEKAKKKADGVMESEEMGDAEKARQVRRMLARAAKGKEKAKEKK 860
Query: 766 YVVAK---KGVQVRAG--KGKV-LVDPRMKKDSRTHGSGKARKGGSKK 807
VVAK +GV+ R KGK +VD RM+K+ R + +K GSK+
Sbjct: 861 IVVAKGVNRGVKGRPTGVKGKYKIVDARMRKEVR--ALKRIKKAGSKR 906
>gi|430812227|emb|CCJ30380.1| unnamed protein product [Pneumocystis jirovecii]
gi|430814238|emb|CCJ28497.1| unnamed protein product [Pneumocystis jirovecii]
Length = 332
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 154/328 (46%), Positives = 220/328 (67%), Gaps = 10/328 (3%)
Query: 1 MGKVKGKHRL--DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQ 58
MGK + K R DK+Y LAKE GYRSR+S+KL+QL+ K+ FL + ++DLCAAPGGW+Q
Sbjct: 1 MGKSRAKQRKQGDKWYYLAKEQGYRSRSSFKLIQLNKKYHFLEKTKVLIDLCAAPGGWLQ 60
Query: 59 VAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
VA + GSL+ G+DLVPI PI ++ +DIT +CR +++ ++ D +LHD
Sbjct: 61 VASKYCISGSLICGVDLVPIKPIPNVITFVEDITTEKCRGKLRHYLKTWKA---DTILHD 117
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+PNVG +W +A SQ LV+ S+K+ +FL GTF+TK+FRS+DY+++L+ L QLF K
Sbjct: 118 GAPNVGVSWLHDAYSQTELVLMSLKIVAEFLTYNGTFITKLFRSKDYNNLLWVLNQLFGK 177
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRK--VVDVLRGTKQ 236
VE KP ASR SAEI+++ +YKAP KIDP+ D K++F+ P + V +K+
Sbjct: 178 VEATKPLASRDVSAEIFVICQEYKAPDKIDPKFFDPKFVFEDLPNPSQDHQSRVFNPSKK 237
Query: 237 KRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGD---PACSAIKDHELTTE 293
+R RDGYEDG+ K A +F+ SNNP+E+L +I+ D IKD ++TT+
Sbjct: 238 RRQRDGYEDGNYIQHKTISAEEFLTSNNPIEVLSIANAISLDDRDLKNYKGIKDFDITTK 297
Query: 294 EVKALCDDLRVLGKQDFKHLLKWRMQIK 321
E+ A C DLRVLGK+DF+ LLKWR+ ++
Sbjct: 298 EIIACCQDLRVLGKKDFRGLLKWRILVR 325
>gi|350399404|ref|XP_003485513.1| PREDICTED: putative rRNA methyltransferase 3-like isoform 1 [Bombus
impatiens]
Length = 852
Score = 314 bits (804), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 149/324 (45%), Positives = 213/324 (65%), Gaps = 7/324 (2%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R DK+Y+LAKE GYRSRA++KL+Q++ KF FL+ S +DLCAAPGGWMQ+A Q +P
Sbjct: 9 GKQRKDKFYQLAKETGYRSRAAFKLIQMNRKFEFLQKSRVCIDLCAAPGGWMQIARQNMP 68
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V S+++G+DL PI PI G +SL +DIT +CR + + ++ D+VLHDG+PNVG
Sbjct: 69 VSSVIIGVDLFPIKPIPGCISLVEDITTDKCRVSISRELKTWKA---DVVLHDGAPNVGK 125
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
W +A Q L + ++K+AT FL P G F+TKVFRS+DY+++++ LKQLF KV KP
Sbjct: 126 NWLHDAYQQIVLTLAALKMATYFLRPGGWFITKVFRSKDYNALVWVLKQLFRKVHATKPQ 185
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHRDGYE 244
ASR+ SAEI+++ Y AP K+DP+ LD KY+F + +EP ++V K+K +GY
Sbjct: 186 ASRAESAEIFVVCQYYIAPDKLDPKFLDPKYVFSELEIEPTNKLNVYNPAKKKDKVEGYP 245
Query: 245 DGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLRV 304
+ D TL DFI N +E L + + I F D I +HE TT+E+K C D++V
Sbjct: 246 ENDYTLYHKLSVKDFIAHENAVEALQNASEIVFDD---ETIANHEKTTKEIKECCKDIKV 302
Query: 305 LGKQDFKHLLKWRMQIKKAFSSAE 328
LGK+D + L+ W +K++ E
Sbjct: 303 LGKKDLRSLINWWKAVKESLKEKE 326
>gi|307176560|gb|EFN66047.1| Putative rRNA methyltransferase 3 [Camponotus floridanus]
Length = 844
Score = 313 bits (802), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 163/355 (45%), Positives = 228/355 (64%), Gaps = 13/355 (3%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R DKYY+LAKE GYRSRA++KL+QL+ KF FL+ S +DLCAAPGGWMQVA Q +P
Sbjct: 8 GKQRKDKYYQLAKETGYRSRAAFKLIQLNRKFEFLQKSRVCIDLCAAPGGWMQVARQNMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V S+V+G+DL PI PI G +SL +DIT +CR + + ++ D+VL+DG+PNVG
Sbjct: 68 VSSIVIGVDLFPIKPIPGCISLTEDITTDKCRVAISRELKTWKA---DVVLNDGAPNVGK 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
W +A Q L + +VKLATQFL G FVTKVFRS+DY ++++ LKQLF+KV KP
Sbjct: 125 NWLHDAYQQVVLTLSAVKLATQFLRAGGWFVTKVFRSKDYHALIWVLKQLFKKVHATKPQ 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHR-DGY 243
ASR+ SAEI+++ Y AP K+DP+ D KY+F + +E + L+ KQK+++ +GY
Sbjct: 185 ASRNESAEIFVVCQYYIAPDKLDPKFFDAKYVFSELEIESTNKSNFLQPDKQKKNKAEGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLR 303
D TL A +FI N +E L + + I D I +HE TT+EV+ C D++
Sbjct: 245 PTNDYTLYHKLSAKEFIACENAVEFLQNASEIVIDD---EFINNHEKTTKEVRECCKDIK 301
Query: 304 VLGKQDFKHLLKWRMQIKKAFS-SAEKATV----PASASAPTEGENEEDADNRVL 353
VLG++D K LL W +K+A + + EK V +AS E +ED ++ V+
Sbjct: 302 VLGRKDLKLLLNWWKSLKQAQAETKEKEDVVEDETTTASKTISLEEQEDLEDAVI 356
>gi|195432683|ref|XP_002064346.1| GK19748 [Drosophila willistoni]
gi|194160431|gb|EDW75332.1| GK19748 [Drosophila willistoni]
Length = 824
Score = 312 bits (800), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 168/354 (47%), Positives = 227/354 (64%), Gaps = 16/354 (4%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R DK+Y+LAKE G+RSRA++KL+QL+ KF FL+ S +DLCAAPGGWMQVA Q +P
Sbjct: 8 GKTRKDKFYQLAKETGFRSRAAFKLIQLNRKFGFLQQSQVCIDLCAAPGGWMQVAKQNMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V S+V+G+DL PI PI G + L +DIT +CR + K ++ D+VLHDG+PNVG
Sbjct: 68 VSSIVIGVDLFPIRPIAGCIGLVEDITTEKCRQSLTKELQSWKA---DVVLHDGAPNVGR 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
W +A Q L ++++KL TQFL G FVTKVFRS+DY+++L+ LKQLF+KV KP+
Sbjct: 125 NWLFDAYQQICLTLNALKLGTQFLRSGGWFVTKVFRSKDYNALLWVLKQLFKKVHATKPS 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQG-SVEPRKVVDVLRGTKQKRHR-DGY 243
ASR SAEI+++ Y AP +IDPRLLD KY+F+ +E +K +L KQKR + +GY
Sbjct: 185 ASRKESAEIFVVCQGYLAPDRIDPRLLDSKYVFEELDLEGKKKSSLLHPEKQKRIKAEGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLR 303
+ D LR AT+F+ + N L L + SI D I H+ TT E+ C D++
Sbjct: 245 TEQDIALRNDLAATEFMQAENALAALQGIGSIRIDD---ERIARHKKTTTEILECCKDIK 301
Query: 304 VLGKQDFKHLLKWRMQIKKAF---SSAEKATVPASASAPT-----EGENEEDAD 349
VLG++D K LL W IK F +AE+ T+ S P E E+ EDAD
Sbjct: 302 VLGRKDIKGLLLWWKAIKDEFFKTEAAEEETLVVEESTPKPLTQEEIEDMEDAD 355
>gi|301123027|ref|XP_002909240.1| rRNA methyltransferase, putative [Phytophthora infestans T30-4]
gi|262100002|gb|EEY58054.1| rRNA methyltransferase, putative [Phytophthora infestans T30-4]
Length = 881
Score = 311 bits (798), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 194/518 (37%), Positives = 294/518 (56%), Gaps = 34/518 (6%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
KH DKYY LA++ GYR+R+++KL+QL+ K+ FL ++ +DLCAAPGGW QVA + +P
Sbjct: 6 KHDKDKYYNLARQQGYRARSAFKLIQLNKKYDFLSTAKVCIDLCAAPGGWCQVAAKYMPA 65
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
S++LG+DL+PI PIRG + + DIT CR +K+ M+ D+VL DG+PNVG
Sbjct: 66 SSIILGIDLLPIRPIRGVKTFQCDITTVRCRQIIKQEMQSWQA---DVVLCDGAPNVGTE 122
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
++++A QN L + ++KLA + GTFV+KVFRSQDY+++L+ KQLF+KV KP +
Sbjct: 123 YSKDAYVQNELALIALKLAVDVMGRGGTFVSKVFRSQDYNALLWVFKQLFKKVSATKPLS 182
Query: 187 SRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVL--RGTKQKRHRDGYE 244
SR+ SAEI+++ ++ AP IDP+L D KY+F K + + + +KRHR+GY+
Sbjct: 183 SRNESAEIFVVCEQFLAPHSIDPKLFDPKYVFDQVDSQEKTITIFHPKFGDRKRHREGYD 242
Query: 245 DG-DTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLR 303
+ TL T FI +++P+ +L T + F P +DH+ T+ E+ DL+
Sbjct: 243 EALGVTLTNECSVTQFIDAHDPIRLLTDTTRVKFL-PEDDVYRDHKDTSIEIVTCLSDLK 301
Query: 304 VLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGE--------NEEDADNRVLNE 355
VLGK DFK LLKWR ++ K KA P E E++ D V E
Sbjct: 302 VLGKSDFKSLLKWRTRMLKYKEELLKAKKPEEEKEEEEKPEKEPERELTEKEKDALVREE 361
Query: 356 MEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHE-LFSLSSIKGKKD 414
+ +L+ + +KKREKK +++ K + R A GM D + D T+ E FSL +K K
Sbjct: 362 LSQLRANVQAKKKREKKKERERKQKLRIRAALGMNADGI--DVTEAESAFSLKELKLSKS 419
Query: 415 LAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENYV 474
D+ NA A+ S DE +T + D ++ +YDE LE +++AYE ++
Sbjct: 420 KV-----DELENAGADSSSDEELQFETSDEEDEDAGLEDSDAEYDELLEASMEKAYEQFL 474
Query: 475 AKRGGSTMQRKRAKK-----------AYAQEDQLSEGD 501
+RG RK K+ A Q+ ++ +GD
Sbjct: 475 TRRGDDVKTRKAVKRTKVAKRALAGEALVQDSEMFDGD 512
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 116/202 (57%), Gaps = 15/202 (7%)
Query: 608 FEIV-----PAPGADSSDDSSSDESEDEEVDT--KAEILACAKKMLRKKQREQILDDAYN 660
FE+V P A D +S+ EE D +A+ LA A M+ K + + ++D +YN
Sbjct: 667 FEVVAAGEEPDENALPIMDDRKYDSDHEEYDAEDRAKTLALASMMIHKSKAKDMIDASYN 726
Query: 661 RYMFDD-DGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKR 719
RY ++D + LPDWF ++E +H + P+ K +A MK +F E+ +P KKVAEA+ RK+R
Sbjct: 727 RYAWNDSEALPDWFADDEDKHYRPQIPIPKNVLAQMKERFMEMATKPVKKVAEARGRKQR 786
Query: 720 VAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKEYVVAKKGVQVRA-- 777
+ ++KL+ +KKA I++ D+S R K K I++ K A K+ K YVV+ +G A
Sbjct: 787 MQLKKLKAAKKKATDIANLPDMSTREKLKAIDRAMKGARLKKESKVYVVSNRGGSRTADG 846
Query: 778 -----GKGKVLVDPRMKKDSRT 794
GK +VDPRMK D R
Sbjct: 847 KKIGKGKKVKIVDPRMKSDKRN 868
>gi|392576542|gb|EIW69673.1| hypothetical protein TREMEDRAFT_71706 [Tremella mesenterica DSM
1558]
Length = 948
Score = 311 bits (798), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 193/505 (38%), Positives = 279/505 (55%), Gaps = 49/505 (9%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+R+++KL+ L+ K+ L S +DLCAAPGGW+QVA + +P
Sbjct: 9 GKGRLDKFYKLAKEQGYRARSAFKLIHLNRKYDLLAKSKCTIDLCAAPGGWLQVAEKYMP 68
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
GSL++G+DL PI + + DIT P+CR ++ M H +A DLVLHDG+PNVG
Sbjct: 69 KGSLIIGVDLHPIRALPHVTTFVSDITTPQCRNLLRSHM--HDWKA-DLVLHDGAPNVGS 125
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A +QN LV+ S+KLAT+FL G FVTKVFRSQDY+S+L+ QLF+ VE KP
Sbjct: 126 AWVQDAFTQNELVLQSLKLATEFLVKGGNFVTKVFRSQDYNSLLWVFGQLFDSVEATKPP 185
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF---------------QGS--------- 221
+SR+ SAEI+++ + AP IDP+ LD K++F +GS
Sbjct: 186 SSRNVSAEIFVVCQGFIAPKHIDPKFLDPKHVFKDVAALPTSITQSTGEGSTTAASSSKP 245
Query: 222 -VEPRKVVDVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDP 280
V + +V K +RHRDGY +GD TL + DF+ +P+ +LGS+ I F
Sbjct: 246 AVNNQAHANVFMPEKNRRHRDGYAEGDYTLFHKTTVGDFVKGADPVALLGSMNQIEFVTE 305
Query: 281 ACSAIKDHELTTEEVKALCDDLRVLGKQDFKHLLKWR--MQIKKAFSSAEKATVPASASA 338
TT +V A DL+VLGK DFK L+KWR ++++ AT +
Sbjct: 306 EEKGWLKSRHTTPDVLANFADLKVLGKGDFKLLMKWRTAIRLQTGLDVKADATKDLTEEV 365
Query: 339 PTEGENEEDADNRVLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQI--DVMQD 396
+ +EE+ ++ E+E L+ + + KREKK +K+AK+ + M + D+ D
Sbjct: 366 NIQPMDEEE---QISAELERLRESKLSQTKREKKRANEKKAKELLKHQLHMTVPTDLDFD 422
Query: 397 DYT--DHELFSLS------SIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSD 448
D T ++F L S +G+K D A+ + +E +
Sbjct: 423 DPTLGGEQVFDLGEGEKELSRRGRKSTLGETLKD------ADGMSSSDSESENEEEDAEV 476
Query: 449 IDSDEERRKYDEQLEEVLDQAYENY 473
+ SDEER + E LE LD Y+ Y
Sbjct: 477 LSSDEERERRTEALEGELDGMYDEY 501
Score = 102 bits (255), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 115/182 (63%), Gaps = 12/182 (6%)
Query: 636 AEILACAKKMLRKKQR-EQILDDAYNRYM-FDDDGLPDWFLEEERRHRQAIRPVTKEEIA 693
AE + A +++ ++Q ++DD +NR+ + D LP+WFL++E +H + P+TKE ++
Sbjct: 768 AEAITLATRLINRQQTLSSLIDDGFNRHSNLNKDSLPNWFLDDEAKHYRPNIPITKEAVS 827
Query: 694 AMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQL 753
++ + + +DARP KKVAEAKARKK A+ +LEK +KKA+ + D D+++ K KQ+ +L
Sbjct: 828 VLRERQRALDARPIKKVAEAKARKKYRAIARLEKAKKKADGVMDTDDLNENEKAKQVGKL 887
Query: 754 YKSA--VPKRPKKEYVVAK---KGVQVR--AGKGKV-LVDPRMKKDSRTHGSGKARKGGS 805
A K+ +K+ VVAK KG++ R KGK +VD RM+K+ R + +K G
Sbjct: 888 LNRAKGKDKKKEKKIVVAKGSNKGIKGRPKGVKGKYKIVDSRMRKEVR--AEKRIKKAGK 945
Query: 806 KK 807
K+
Sbjct: 946 KR 947
>gi|195398799|ref|XP_002058008.1| GJ15847 [Drosophila virilis]
gi|194150432|gb|EDW66116.1| GJ15847 [Drosophila virilis]
Length = 831
Score = 311 bits (797), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 178/425 (41%), Positives = 258/425 (60%), Gaps = 20/425 (4%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R DK+Y+LAKE G+RSRA++KL+QL+ KF FL+ S +DLCAAPGGWMQVA Q +P
Sbjct: 8 GKTRKDKFYQLAKETGFRSRAAFKLIQLNRKFGFLQQSQVCIDLCAAPGGWMQVAKQNMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V S+V+G+DL PI PI G + L +DIT +CR + K ++ V D+VLHDG+PNVG
Sbjct: 68 VSSIVIGVDLFPIRPIAGCIGLVEDITTEKCRQSLTKELQSWKV---DVVLHDGAPNVGR 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
W +A Q L ++++KL T FL G FVTKVFRS+DY+++L+ LKQLF+KV KP+
Sbjct: 125 NWLYDAYQQICLTLNALKLGTHFLRGGGWFVTKVFRSKDYNALLWVLKQLFKKVHATKPS 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQG-SVEPRKVVDVLRGTKQKRHR-DGY 243
ASR SAEI+++ Y AP +IDPRLLD KY+F+ +E ++ +L KQKR + +GY
Sbjct: 185 ASRKESAEIFVVCQGYLAPDRIDPRLLDAKYVFEELDLEGKQKNSLLHPEKQKRIKAEGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLR 303
+ D LR A++F+ + N L L + SI D I H+ TT E+ C DL+
Sbjct: 245 TEQDIALRNDLAASEFMQAENALAALQGIGSIRIDD---ERIAKHKRTTSEILECCKDLK 301
Query: 304 VLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAP------TEGENEEDADNRVLNEME 357
VLG++D K LL W IK+ +E V A T+ + E+ D + ++E
Sbjct: 302 VLGRKDIKGLLLWWKHIKQELFQSEAEGVIEEPEAEQPAEPLTQDQIEDMEDAELQQQIE 361
Query: 358 ELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDD----YTDHELFSLSSIKGKK 413
L A +++K+ ++K ++K K + + + + DD T+HE+F L I
Sbjct: 362 SL--ATEEQKELKRKRKKTLKSKAKLHEKMNLNMVIKGDDGPVEETEHEIFDLKGINSVS 419
Query: 414 DLAAV 418
+L A+
Sbjct: 420 ELDAM 424
>gi|384501460|gb|EIE91951.1| hypothetical protein RO3G_16662 [Rhizopus delemar RA 99-880]
Length = 692
Score = 310 bits (793), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 245/701 (34%), Positives = 373/701 (53%), Gaps = 85/701 (12%)
Query: 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCL 172
D+VLHDG+PNVG AWA +A SQ+ LV+ S+KLAT+FL+ GTFVTKVFRS+DY+ +++
Sbjct: 7 DVVLHDGAPNVGRAWAHDAFSQSELVLVSLKLATEFLSKGGTFVTKVFRSKDYNKLIWVF 66
Query: 173 KQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDV 230
+QLF KVE KP +SR+ SAEI+++ + AP KIDPR+LD K +F G+ EP+K+ DV
Sbjct: 67 QQLFRKVEATKPPSSRNVSAEIFVVCRDFIAPKKIDPRMLDPKAVFSDVGAEEPKKLADV 126
Query: 231 LRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHEL 290
R K+KRHRDGYEDGD TL K +FI +++P+ LGS TF + ++
Sbjct: 127 FRPEKKKRHRDGYEDGDYTLHKTLDVMEFIRADDPIVTLGSYNQFTFSSDESRELLKRDI 186
Query: 291 TTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAF----SSAEKATVPASASAPTEGENEE 346
TTE++K C+DL+VLG+ +FK LLKWR I+ F EK TV + E
Sbjct: 187 TTEDIKINCEDLKVLGRGEFKALLKWRTTIRDEFKMDKKKEEKMTVIEEEPMDEDEMLEA 246
Query: 347 DADNRVLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSL 406
+ N L + E K ++RK EKK+ +R + T + +D + + E+F++
Sbjct: 247 ELSN--LTKEEAAKRKREKRKANEKKMKLIQRMQLNMIVPTDIALD--DNGLGEDEIFNI 302
Query: 407 SSIKGKKDLAAVEYDDDDVNAAAEDSEDERPN----------RDTQEHVSSDIDSDEERR 456
I KKD + + D++ A + ED+ P+ R + + D+DS++E
Sbjct: 303 KKI--KKDASLEKLQKGDMSMADDLEEDDGPDDIKVDKNMKGRIAEMDMDEDLDSEDE-- 358
Query: 457 KYDEQLEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTS------ 510
Y+ LE +D+ Y Y +R + RAK+A ++D+ S G +D+ T + +
Sbjct: 359 -YERDLENQMDEDYNRYKQRRAERDA-KFRAKQAREEQDEWS-GFDDKKTQNKNRDKKFD 415
Query: 511 ----YDSDKDQGDLDANPLMVPLDDGIRPTQEEITNK----------------------- 543
DS+++ D N + D+ + P + + TN
Sbjct: 416 SDSDSDSEEEDKDESDNDVSSSEDEEMTPIKSKTTNSLMNDLGQKAALSKKTASGLSTAA 475
Query: 544 --WFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKMANDAAGPKSTHNQV 601
+F Q+IF + + + K GS D + ++ + K K+ D + +
Sbjct: 476 AMFFDQDIFQDVAADELMEKEGSSDAEEFIRE-----LSRKRKRNQEEDGSSGQ------ 524
Query: 602 SEVEGDFEIVPAPGADSSDDSSSDESED----------EEVDTKAEILACAKKMLRK-KQ 650
E + DFEI P SDD D ED E+ T E + A+++ K K
Sbjct: 525 EEEDSDFEIQPTEDKLPSDDEMWDGGEDDNSKAMKKALEKGLTTPESITLARQLANKEKT 584
Query: 651 REQILDDAYNRYMF-DDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKK 709
E ++D +++ F D DGLP+WFL+EE RH + PVTKE + ++ + + ++ARP KK
Sbjct: 585 LEDLVDMGFSKEAFRDKDGLPEWFLDEESRHNKPNLPVTKEAMNQLREKLRALNARPIKK 644
Query: 710 VAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQI 750
VAEAKARKK A +KL K +KKA I+D D+S++ K K I
Sbjct: 645 VAEAKARKKFKAAQKLAKAQKKATDIADNPDMSEKEKAKTI 685
>gi|422295206|gb|EKU22505.1| et-dependent rrna methyltransferase spb1, partial [Nannochloropsis
gaditana CCMP526]
Length = 533
Score = 310 bits (793), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 179/418 (42%), Positives = 254/418 (60%), Gaps = 21/418 (5%)
Query: 13 YYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLG 72
YY LAKE GYRSRA++KL+Q++ K+ FL + LDLCAAPGGW QVA + +P S++LG
Sbjct: 16 YYHLAKEQGYRSRAAFKLIQINRKYDFLSKAKVCLDLCAAPGGWCQVAAKHMPSDSIILG 75
Query: 73 LDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAM 132
+DL+PI PI +L DIT PECRA VK+ M H D+VL DG+PNVG + ++A
Sbjct: 76 VDLLPIRPIAKVKTLVHDITTPECRAAVKREMRAHP--HVDVVLCDGAPNVGATYDKDAF 133
Query: 133 SQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASA 192
QN + + +++ AT L P GTF+TKV+RSQDY+++++ QLF V+ KP++SR SA
Sbjct: 134 VQNEIALAALRAATCHLGPGGTFLTKVYRSQDYNALMWVFNQLFASVQAIKPSSSRQQSA 193
Query: 193 EIYLLGIKYKAPAKIDPRLLDVKYLFQ----GSVEPRKVVDVLRGTKQKRHRDGY--EDG 246
EI++L ++YKAP IDP+LLD Y+F GS + + + +QKRHR GY E G
Sbjct: 194 EIFVLCLRYKAPHSIDPKLLDPAYVFAEMEGGSGDKAISIFSAQYARQKRHRSGYDGEAG 253
Query: 247 DTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLRVLG 306
RK S+ T F+ S +P++ L + + F P C+ +H LTTEEVK+ DL+VLG
Sbjct: 254 VLLHRKASV-TAFLASEDPVQFLSEQSEVVF-SPGCTPFLEHPLTTEEVKSCLADLKVLG 311
Query: 307 KQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNR--------VLNEMEE 358
K DFK LLKWR+++K+ A T A A E+ R + E+++
Sbjct: 312 KSDFKALLKWRLKMKEHQGRASAGTGEEEARAAAAAVLAENTRRRSPEEEEEEIQAEIQK 371
Query: 359 LKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHE-LFSLSSIKGKKDL 415
L+ + KRE+K +K A+ + R+A GM D D DHE +FSL +I +L
Sbjct: 372 LREERAAKTKRERKKEREKSARMRLRQAYGMHHDAF--DLPDHESIFSLKAIGSAAEL 427
>gi|351704432|gb|EHB07351.1| Putative rRNA methyltransferase 3 [Heterocephalus glaber]
Length = 832
Score = 310 bits (793), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 204/580 (35%), Positives = 322/580 (55%), Gaps = 85/580 (14%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
GKV GK R DK+Y LAKE GYRSR+++KL+QL+ +F FL+ + A+LDLCAAPGGW+QVA
Sbjct: 5 GKV-GKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAA 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ +PV SL++G+DLVPI P+ V+L++DIT CR ++K ++ V D+VL+DG+P
Sbjct: 64 KFMPVSSLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWKV---DVVLNDGAP 120
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG +W +A SQ L + +++LA FLA G F+TKVFRS+DY +L+ +QLF +V+
Sbjct: 121 NVGASWVHDAYSQAHLTLMALRLACDFLAHGGCFITKVFRSRDYQPLLWIFQQLFRRVQA 180
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHR 240
KP ASR SAEI+++ + AP K+D + D K+ F + V+ + V +++ TK+K
Sbjct: 181 TKPQASRHESAEIFVVCQGFLAPDKVDSKFFDPKFAFKEVEVQAKTVTELV--TKKKPKA 238
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
+GY +GD TL + TDF+ + NP++ L + I+ D + + H TTE+++A C
Sbjct: 239 EGYAEGDLTLYHCTSVTDFLRAANPVDFLSKASEISIDD---NELAQHPATTEDIRACCQ 295
Query: 301 DLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPA-------------------SASAPTE 341
D+RVLG+++ + LL WR ++++ + K A + P++
Sbjct: 296 DIRVLGRKELRSLLNWRTKLRRYMAKKLKEQAKALDISLSSGEEEGDEESTSETTRQPSK 355
Query: 342 GENEEDADNRVLNEMEELKYA----------MDQRKKREKKLLAKKRAKDKARKATGMQI 391
E EE+ N+ L EM+ + A +QRK+RE+ L G+ I
Sbjct: 356 EEEEEEQLNQTLAEMKAQEVAELKRKKKKLLREQRKQRERIEL--------KMDLPGVSI 407
Query: 392 DVMQDDYTDHELFSLSSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDS 451
D + +FSL +I+G + L V D +AA+ + P D +VS D+
Sbjct: 408 ----ADEGETGMFSLCTIRGHQLLEEVTQGD---MSAADTLLSDLPGDDI--YVS---DA 455
Query: 452 DEERRKYDEQLEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSY 511
+E+ D L+ LD +A GG +G +D+ + +
Sbjct: 456 EEDN---DSSLDSDLD---PEELAGVGG------------------HQGLKDQQCVRFAQ 491
Query: 512 DSDKDQGDLDANPLMVPLDDGIRPTQEEITNKWFSQEIFA 551
D ++ + + NPL+VPL++ QEE TN WFS++ F+
Sbjct: 492 LED-NKEEEEENPLLVPLEEKT-VLQEEQTNLWFSKDGFS 529
>gi|405118494|gb|AFR93268.1| RNA methyltransferase [Cryptococcus neoformans var. grubii H99]
Length = 908
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 177/441 (40%), Positives = 259/441 (58%), Gaps = 46/441 (10%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+YRLAKE GYR+R+++KLV L+ K+ L S +DLCAAPGGW+QVA + +P
Sbjct: 9 GKGRLDKFYRLAKEQGYRARSAFKLVHLNRKYDLLSKSRCCIDLCAAPGGWLQVAEKYMP 68
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
GSL++G+DL I P+ + DIT CR +++ M H +A DLVLHDG+PNVG
Sbjct: 69 KGSLIIGVDLNAIKPLPHVTTFVSDITTAHCRQTLRQHM--HDWKA-DLVLHDGAPNVGS 125
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A +QN LV+ S+KLAT+FLA G+FVTKVFRSQDY+S+L+ QLF+ VE KP
Sbjct: 126 AWVQDAFTQNELVLQSLKLATEFLAKGGSFVTKVFRSQDYNSLLWVFGQLFKSVEATKPP 185
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--------------GSVEPRKVV--- 228
+SR+ SAEI+++ + AP IDP+ LD K++F+ S+ P
Sbjct: 186 SSRNVSAEIFVVCRDFIAPKHIDPKFLDPKHVFKDIASLPTSITEPTDASIVPTSSSTAS 245
Query: 229 ----------------DVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSV 272
+V K++RHR+GY +GD TL + A +F+ +P+ +LG++
Sbjct: 246 AAAAAARLAANSHAHSNVYAPEKKRRHREGYAEGDYTLYHTASAEEFVRGQDPVLLLGNM 305
Query: 273 TSITFGDPACSAIKDHELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKA-- 330
I F A TT +V A +DL+VLGK DFK L+KWR+ I+ KA
Sbjct: 306 NKIEFRTETEKAWLKSRHTTPDVIANFEDLKVLGKGDFKALMKWRLAIRLEIGLDVKADK 365
Query: 331 TVPASASAPTEGENEEDADNRVLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQ 390
T A+ E +EE+ ++ E+++L+ A + K+E+K +K+A+D + M
Sbjct: 366 TQDATEEVVVEPMDEEE---QITEELQKLQQAKLAKTKKERKRANEKKARDLLKLQLNMT 422
Query: 391 I--DVMQDDYT---DHELFSL 406
+ D+ Q+D + E+F L
Sbjct: 423 VPDDLDQNDLALQGEEEIFDL 443
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 150/284 (52%), Gaps = 30/284 (10%)
Query: 544 WFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKMANDAAGPKSTHNQVSE 603
WF Q +F GDL L +DE + ++ + M DA+ ST E
Sbjct: 634 WFDQPVFKNV---GDLAALDGDDEEEEEEDESEEEESADEDVDM-EDASESSST----LE 685
Query: 604 VEGDFEIVPAPGADSSDDSSSDESEDEEVDTK---------AEILACAKKML-RKKQREQ 653
+ DFEIVP D + D+ + +EV K AE ++ A ++ RK ++
Sbjct: 686 GDDDFEIVPQAPEDDGPEWDVDDEDQDEVKKKVIQDKGLLTAEAVSLATALVNRKTTADK 745
Query: 654 ILDDAYNRY-MFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAE 712
++D +NR + DGLP WFL++E + + P+TKE + A++A+ + +DARP KKVAE
Sbjct: 746 LIDQGFNRLSAHNKDGLPTWFLDDESQFYKPNIPITKEAVDALRARQRALDARPIKKVAE 805
Query: 713 AKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLY---KSAVPKRPKKEYVVA 769
AK RKK A+ ++EK +KKA+ + + ++ D K +Q+ ++ K +K+ VVA
Sbjct: 806 AKGRKKMKAVARMEKAKKKADGVMESEEMGDGEKARQVRRMLARAAKGKEKAKEKKIVVA 865
Query: 770 K---KGVQVRAG--KGKV-LVDPRMKKDSRTHGSGKARKGGSKK 807
K KGV+ R KGK +VD RM+K+ R + +K GSK+
Sbjct: 866 KGVNKGVKGRPTGVKGKYKIVDARMRKEVR--ALKRIKKAGSKR 907
>gi|58865606|ref|NP_001012014.1| pre-rRNA processing protein FTSJ3 [Rattus norvegicus]
gi|73621846|sp|Q5RJT2.1|RRMJ3_RAT RecName: Full=pre-rRNA processing protein FTSJ3; AltName:
Full=Protein ftsJ homolog 3; AltName: Full=Putative rRNA
methyltransferase 3; AltName: Full=rRNA
(uridine-2'-O-)-methyltransferase 3
gi|55778366|gb|AAH86512.1| FtsJ homolog 3 (E. coli) [Rattus norvegicus]
Length = 829
Score = 309 bits (792), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 210/582 (36%), Positives = 318/582 (54%), Gaps = 87/582 (14%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
GKV GK R DK+Y LAKE GYRSR+++KL+QL+ +F FL+ + A+LDLCAAPGGW+QVA
Sbjct: 5 GKV-GKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAA 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ +PV SL++G+DLVPI P+ V+L++DIT CR ++K ++ V D+VL+DG+P
Sbjct: 64 KFMPVSSLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWKV---DVVLNDGAP 120
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG +W +A SQ L + +++LA FLA G F+TKVFRS+DY +L+ +QLF +V+
Sbjct: 121 NVGASWVHDAYSQAHLTLMALRLACDFLARGGCFITKVFRSRDYQPLLWIFQQLFHRVQA 180
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHR 240
KP ASR SAEI+++ + AP K+D + D K+ F + V+ + V +++ TK+K
Sbjct: 181 TKPQASRHESAEIFVVCQGFLAPDKVDAKFFDPKFAFKEVEVQAKTVTELV--TKKKPKA 238
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
+GY +GD TL + TDF+ + NP++ L + I+ D + H TTE+++A C
Sbjct: 239 EGYAEGDLTLYHRTSVTDFLRAANPVDFLSKASEISIDD---KELAQHPATTEDIRACCQ 295
Query: 301 DLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPA---------------------SASAP 339
D++VLG+++ + LL WR ++++ + K A AS
Sbjct: 296 DIKVLGRKELRSLLNWRTKLRRYVAKKLKEQAKALDISLSSEEEGDEEESAAETKQASEE 355
Query: 340 TEGENEEDADNRVLNEMEELKYA----------MDQRKKREKKLLAKKRAKDKARKATGM 389
E EE+ NR L EM+ + A +QRK+RE+ L G+
Sbjct: 356 EEEREEEEQLNRTLAEMKAQEVAELKRKKKKLLREQRKQRERVELKM--------DLPGV 407
Query: 390 QIDVMQDDYTDHELFSLSSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDI 449
I D + +FSL +I+G++ L E D+NAA D P D +VS
Sbjct: 408 SI----ADEGETGMFSLRTIRGQQLLE--EVTQGDMNAADTFLSD-LPRDDI--YVSDAE 458
Query: 450 DSDEERRKYDEQLEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHT 509
D D D LE LD E R S Q+++ +AQ D
Sbjct: 459 DDD------DTSLESDLDP--EELAGVRTHSD-QKEQKSLQFAQVD-------------- 495
Query: 510 SYDSDKDQGDLDANPLMVPLDDGIRPTQEEITNKWFSQEIFA 551
DS +++G+ NPL+VPL++ QEE + WFS++ F+
Sbjct: 496 --DSKEEEGE---NPLLVPLEEKA-VLQEEQASLWFSKDGFS 531
>gi|58263807|ref|XP_569180.1| RNA methyltransferase [Cryptococcus neoformans var. neoformans
JEC21]
gi|134108256|ref|XP_777079.1| hypothetical protein CNBB3110 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819491|sp|P0CS79.1|SPB1_CRYNB RecName: Full=AdoMet-dependent rRNA methyltransferase SPB1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|338819492|sp|P0CS78.1|SPB1_CRYNJ RecName: Full=AdoMet-dependent rRNA methyltransferase SPB1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|50259764|gb|EAL22432.1| hypothetical protein CNBB3110 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223830|gb|AAW41873.1| RNA methyltransferase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 908
Score = 309 bits (792), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 175/441 (39%), Positives = 259/441 (58%), Gaps = 46/441 (10%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+YRLAKE GYR+R+++KLV L+ K+ L + +DLCAAPGGW+QVA + +P
Sbjct: 9 GKGRLDKFYRLAKEQGYRARSAFKLVHLNRKYDLLSKARCCIDLCAAPGGWLQVAEKYMP 68
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
GSL++G+DL I P+ + DIT P CR +++ M H +A DLVLHDG+PNVG
Sbjct: 69 KGSLIIGVDLNAIKPLPHVTTFVADITTPHCRQTLRQHM--HDWKA-DLVLHDGAPNVGS 125
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A +QN LV+ S+KLAT+FLA G+FVTKVFRSQDY+S+L+ QLF+ VE KP
Sbjct: 126 AWVQDAFTQNELVLQSLKLATEFLAKGGSFVTKVFRSQDYNSLLWVFGQLFKSVEATKPP 185
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ-------GSVEPRKV----------- 227
+SR+ SAEI+++ + AP IDP+ LD K++F+ EP
Sbjct: 186 SSRNVSAEIFVVCRDFIAPKHIDPKFLDPKHVFKDIASLPTSITEPTDTSIAPTSSSTAS 245
Query: 228 ---------------VDVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSV 272
+V K++RHR+GY +GD TL + A +F+ +P+ +LG++
Sbjct: 246 AAAAAARLAANSHAHSNVYAPEKKRRHREGYAEGDYTLHHTASAEEFVRGQDPVLLLGNM 305
Query: 273 TSITFGDPACSAIKDHELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKA-- 330
I F + TT ++ A +DL+VLGK DFK L+KWR+ I+ KA
Sbjct: 306 NKIEFRNETEKGWLKSRHTTPDIIANFEDLKVLGKGDFKALMKWRLAIRLEIGLDVKADK 365
Query: 331 TVPASASAPTEGENEEDADNRVLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQ 390
T A+ E +EE+ ++ E+++L+ A + KRE+K +K+A++ + M
Sbjct: 366 TQDATEEVVVEPMDEEE---QITEELQKLQQAKLAKTKRERKRANEKKARELLKLQLNMT 422
Query: 391 I--DVMQDDYT---DHELFSL 406
+ D+ Q+D + E+F L
Sbjct: 423 VPDDLDQNDLALQGEEEIFDL 443
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 130/228 (57%), Gaps = 24/228 (10%)
Query: 602 SEVEGD--FEIVPAPGADSSDDSSSDESEDEEVDTK---------AEILACAKKML-RKK 649
S +EGD FEIVP D + D+ + +EV K AE ++ A ++ RK
Sbjct: 682 STLEGDDDFEIVPQAPEDDGPEWDVDDEDQDEVKKKVIQDKGLLTAEAVSLATALVNRKT 741
Query: 650 QREQILDDAYNRY-MFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAK 708
++++D +NR + DGLP WFL++E + + P+TKE + A++A+ + +DARP K
Sbjct: 742 TADKLIDQGFNRLSAHNKDGLPTWFLDDESQFYKPNIPITKEAVDALRARQRALDARPIK 801
Query: 709 KVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLY---KSAVPKRPKKE 765
KVAEAK RKK A+ ++EK +KKA+ + + ++ D K +Q+ ++ K +K+
Sbjct: 802 KVAEAKGRKKMKAVARMEKAKKKADGVMESEEMGDGEKARQVRRMLARAAKGKEKAKEKK 861
Query: 766 YVVAK---KGVQVRAG--KGKV-LVDPRMKKDSRTHGSGKARKGGSKK 807
VVAK KGV+ R KGK +VD RM+K+ R + +K GSK+
Sbjct: 862 IVVAKGVNKGVKGRPTGVKGKYKIVDARMRKEVR--ALKRIKKAGSKR 907
>gi|18859957|ref|NP_573099.1| CG8939 [Drosophila melanogaster]
gi|7293173|gb|AAF48557.1| CG8939 [Drosophila melanogaster]
gi|17862372|gb|AAL39663.1| LD23718p [Drosophila melanogaster]
gi|220944838|gb|ACL84962.1| CG8939-PA [synthetic construct]
Length = 817
Score = 308 bits (789), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 158/334 (47%), Positives = 218/334 (65%), Gaps = 8/334 (2%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R DK+Y+LAKE G RSRA++KL+QL+ KF FL+ S LDLCAAPGGWMQVA Q +P
Sbjct: 8 GKTRKDKFYQLAKETGLRSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPGGWMQVAKQNMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V S+V+G+DL PI PI G + L +DIT +CR + K ++ D+VLHDG+PNVG
Sbjct: 68 VSSIVIGVDLFPIRPIAGCIGLVEDITTEKCRQSLTKELQSWKA---DVVLHDGAPNVGR 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
W +A Q L ++++KL+TQFL G FVTKVFRS+DY+++L+ LKQLF+KV KP+
Sbjct: 125 NWLYDAYQQICLTLNALKLSTQFLRNGGWFVTKVFRSKDYNALLWVLKQLFKKVHATKPS 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQG-SVEPRKVVDVLRGTKQKRHR-DGY 243
ASR SAEI+++ Y AP IDPRLLD KY+F+ ++ +K +L KQKR + +GY
Sbjct: 185 ASRKESAEIFVVCQGYLAPDHIDPRLLDSKYVFEELDLDAKKKSSLLHPEKQKRIKAEGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLR 303
D LR AT+F+ + N L L + SI D I +H+ TT E+ C DL+
Sbjct: 245 TAQDIALRNDLAATEFLKAENALAALQGIGSIRIDD---QRIANHKKTTPEILECCKDLK 301
Query: 304 VLGKQDFKHLLKWRMQIKKAFSSAEKATVPASAS 337
VLG++D K L++W +++ F E V +A+
Sbjct: 302 VLGRKDIKGLVQWWKDVRELFVEKETPLVVGNAA 335
>gi|195357054|ref|XP_002044929.1| GM11680 [Drosophila sechellia]
gi|194124271|gb|EDW46314.1| GM11680 [Drosophila sechellia]
Length = 817
Score = 308 bits (788), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 157/329 (47%), Positives = 216/329 (65%), Gaps = 8/329 (2%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R DK+Y+LAKE G RSRA++KL+QL+ KF FL+ S LDLCAAPGGWMQVA Q +P
Sbjct: 8 GKTRKDKFYQLAKETGLRSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPGGWMQVAKQNMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V S+V+G+DL PI PI G + L +DIT +CR + K ++ D+VLHDG+PNVG
Sbjct: 68 VSSIVIGVDLFPIRPIAGCIGLVEDITTEKCRQSLTKELQSWKA---DVVLHDGAPNVGR 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
W +A Q L ++++KL+TQFL G FVTKVFRS+DY+++L+ LKQLF+KV KP+
Sbjct: 125 NWLYDAYQQICLTLNALKLSTQFLRNGGWFVTKVFRSKDYNALLWVLKQLFKKVHATKPS 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQG-SVEPRKVVDVLRGTKQKRHR-DGY 243
ASR SAEI+++ Y AP IDPRLLD KY+F+ ++ +K +L KQKR + +GY
Sbjct: 185 ASRKESAEIFVVCQGYLAPDHIDPRLLDSKYVFEELDLDAKKKSSLLHPEKQKRIKAEGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLR 303
D LR AT+F+ ++N L L + SI D I +H+ TT E+ C DL+
Sbjct: 245 TAQDIALRNDLAATEFLMADNALAALQGIGSIRIDD---QRIANHKKTTPEILECCKDLK 301
Query: 304 VLGKQDFKHLLKWRMQIKKAFSSAEKATV 332
VLG++D K L++W +++ F E V
Sbjct: 302 VLGRKDIKGLVQWWKDVRELFVKKEAPLV 330
>gi|428167936|gb|EKX36887.1| hypothetical protein GUITHDRAFT_58549, partial [Guillardia theta
CCMP2712]
Length = 313
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 157/315 (49%), Positives = 213/315 (67%), Gaps = 7/315 (2%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
DK+Y LAKE GYRSRA++KL+QL+ KF L + VLDLC APG W QVA + PV S++
Sbjct: 1 DKFYHLAKEQGYRSRAAFKLIQLNKKFDLLSKAKVVLDLCGAPGSWSQVAAKNCPVSSII 60
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
L +DL PI PI+ ++L++DIT +C+A +K ++ V DLVL+DG+PNVG W ++
Sbjct: 61 LCVDLCPIKPIKRVIALQEDITTDKCKAAIKNHIKTWKV---DLVLNDGAPNVGANWTKD 117
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
A SQ+ L + ++KLAT FLAP G FVTKVFRS DY+S+++ L QLF++VE KP ASR+
Sbjct: 118 AYSQSELTLQALKLATNFLAPGGNFVTKVFRSADYNSLIWVLNQLFKRVEATKPQASRNE 177
Query: 191 SAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVE-PRKVVDVLRGTKQK-RHRDGYEDGDT 248
SAEI+++ + Y AP KIDP+LLD K +F+ + P K +VL+ K RHRDGYE+G T
Sbjct: 178 SAEIFVVCLGYLAPKKIDPKLLDPKNVFEDVNDGPAKKANVLQQKKLNVRHRDGYEEGIT 237
Query: 249 TLRKVSLATDFIWSNNPLEILGSVTSITF--GDPACSAIKDHELTTEEVKALCDDLRVLG 306
L K A +F+ + L++L I F G + +HE T EEVK C DLRVLG
Sbjct: 238 MLYKEISAEEFVLHEDALQVLTDYNKIVFREGHEVDEQLLEHEKTNEEVKECCKDLRVLG 297
Query: 307 KQDFKHLLKWRMQIK 321
K DF+ LL+WR +K
Sbjct: 298 KGDFRKLLRWRDSMK 312
>gi|344285249|ref|XP_003414375.1| PREDICTED: putative rRNA methyltransferase 3-like [Loxodonta
africana]
Length = 843
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 205/582 (35%), Positives = 312/582 (53%), Gaps = 86/582 (14%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
GKV GK R DK+Y LAKE GYRSR+++KL+QL+ +F FL+ + A+LDLCAAPGGW+QVA
Sbjct: 5 GKV-GKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAA 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ +PV SL++G+DLVPI P+ V+L++DIT CR ++K ++ V D+VL+DG+P
Sbjct: 64 KFMPVSSLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWKV---DVVLNDGAP 120
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG +W +A SQ L + +++LA FLA G+F+TKVFRS+DY +L+ +QLF +V+
Sbjct: 121 NVGASWVHDAYSQAHLTLMALRLACDFLARGGSFITKVFRSRDYQPLLWIFQQLFRRVQA 180
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHR 240
KP ASR SAEI+++ + AP K+D + D K+ F + V+ + V +++ TK+K
Sbjct: 181 TKPQASRHESAEIFVVCQGFLAPDKVDSKFFDPKFAFKEVEVQAKTVTELV--TKKKPKA 238
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
+GY +GD TL + TDF+ + NP++ L + I+ D + H TTE+V+A C
Sbjct: 239 EGYAEGDFTLYHRASVTDFLRAANPVDFLSKTSEISLDD---DELVRHPATTEDVRACCQ 295
Query: 301 DLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPA--------------SASAPTEGENEE 346
D++VLG+++ + LL WR ++++ + K A + T G +
Sbjct: 296 DIKVLGRKELRSLLNWRTKLRRHVAKKLKEQAKALDISLSSGEEEEEGNEEESTAGTMRQ 355
Query: 347 DAD--------NRVLNEMEELKYA----------MDQRKKREKKLLAKKRAKDKARKATG 388
+ N+ L EM+ + A +QRK+RE+ L G
Sbjct: 356 SSKEEEEEEQLNQTLAEMKAQEVAELKRKKKKLLREQRKQRERVELKM--------DLPG 407
Query: 389 MQIDVMQDDYTDHELFSLSSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSD 448
+ I D + +FSL SI+G + LA V D +AA+ + P D SD
Sbjct: 408 VSI----ADEGETGMFSLRSIRGHQLLAEVAQGD---MSAADTFLSDLPRDDI---YVSD 457
Query: 449 IDSDEERRKYDEQLEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMH 508
+ DE D L+ LD E G ++ ++ + ED E E+E
Sbjct: 458 AEEDE-----DASLDSDLDS--EELAGGGGQQGLKDRKCVQFAEVEDGKEENQEEE---- 506
Query: 509 TSYDSDKDQGDLDANPLMVPLDDGIRPTQEEITNKWFSQEIF 550
NPL+VPL++ QEE TN WFS+ F
Sbjct: 507 --------------NPLLVPLEEKA-VLQEEQTNLWFSKGGF 533
>gi|292625927|ref|XP_002666179.1| PREDICTED: putative rRNA methyltransferase 3 isoform 1 [Danio
rerio]
Length = 838
Score = 306 bits (785), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 146/321 (45%), Positives = 219/321 (68%), Gaps = 9/321 (2%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R DK+Y LAKE GYRSR+S+KL+QL+ KF FL+ + A++DLCAAPGGW+QVA + +P
Sbjct: 8 GKTRKDKFYHLAKETGYRSRSSFKLIQLNRKFQFLQKARALVDLCAAPGGWLQVASKFMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V SLV+G+DLVPI PI V+L++DIT +CR ++K ++ V D+VL+DG+PNVG
Sbjct: 68 VSSLVIGVDLVPIKPIPNVVTLQEDITTEKCRQALRKELQTWKV---DVVLNDGAPNVGA 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
W +A SQ L + ++KLA +FLA GTF+TKVFRS+DY +++ +Q F+KV+ KP
Sbjct: 125 NWQHDAFSQANLTLMALKLACEFLAKGGTFITKVFRSKDYQPLMWIFQQFFKKVQATKPQ 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHRDGYE 244
ASR+ SAEI+++ + AP KID + D K+ F + V+ + V +++ K+K +GY
Sbjct: 185 ASRNESAEIFVVCQGFLAPDKIDNKFFDPKHAFKEVDVQVKTVKELV--NKKKPKAEGYS 242
Query: 245 DGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLRV 304
DGD TL T+F+ + NP++ L ITF DP ++ H LT+ E++ C D++V
Sbjct: 243 DGDLTLYHKFTITEFLKAENPVDFLSKANEITFDDP---LLESHPLTSAEIRECCSDVKV 299
Query: 305 LGKQDFKHLLKWRMQIKKAFS 325
LG+++ + LL WR +++K +
Sbjct: 300 LGRKELRLLLSWRSKLRKFLA 320
>gi|406697378|gb|EKD00640.1| RNA methyltransferase [Trichosporon asahii var. asahii CBS 8904]
Length = 930
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 190/512 (37%), Positives = 284/512 (55%), Gaps = 48/512 (9%)
Query: 3 KVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQ 62
K GK RLDK+YRLAKE GYR+R+++KL+ L+ K+ L ++ +DLCAAPGGW+QVA +
Sbjct: 6 KKSGKGRLDKFYRLAKEQGYRARSAFKLIHLNRKYDLLSNAKCCIDLCAAPGGWLQVAEK 65
Query: 63 RVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPN 122
+P GSL++G+DL+PI P+ ++ + DIT P+CR +++ M H +A DLVLHDG+PN
Sbjct: 66 YMPKGSLIIGVDLMPIKPLPHVIAFQADITTPKCRNELRQHM--HDWKA-DLVLHDGAPN 122
Query: 123 VGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVD 182
VG AW Q+A SQN LV+ S++LAT+FL G FVTKVFRSQDY+S+++ QLF VE
Sbjct: 123 VGAAWVQDAFSQNELVLQSLRLATEFLVKGGNFVTKVFRSQDYNSLMWVFNQLFRHVEAT 182
Query: 183 KPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQG--SVEPRKVV------------ 228
KP +SR+ SAEI+++ + AP IDP+ LD K++F+ S P +
Sbjct: 183 KPPSSRNVSAEIFVVCRDFIAPKHIDPKFLDPKHVFKDLQSSLPASITEAPAEEASTAAT 242
Query: 229 -----------------------DVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNP 265
+V K++R R+GY DGD TL + A+DF+ +P
Sbjct: 243 MASTAKAANAAARLAATNNHAHANVYAPEKKRRQREGYADGDYTLFHKASASDFV-RGDP 301
Query: 266 LEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFS 325
+ ILG++ I F TT ++ + +DL+VLGK DFK L+KWR+ I+
Sbjct: 302 VAILGTMNKIAFETEEEKEWLKSRHTTPDIVSNFEDLKVLGKGDFKALMKWRLAIRLEIG 361
Query: 326 SAEKATVPASASAPTEGENEEDADNRVLNEMEELKYAMDQRKKREKKLLAKKRAKDKARK 385
KA+ A+ E D + ++ E++ L ++KREKK + + K +
Sbjct: 362 LDVKASKTEEATE-DVEVEEMDEEQQISEELKRLHEEKRAKQKREKKRKNEIKTKTIQKL 420
Query: 386 ATGMQ----IDVMQDDYTDHELFSLSSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDT 441
GM +D+ + E+F L +G+++ +D V A SE E +
Sbjct: 421 QLGMTAPTDLDMDDRELAGEEMFDLG--EGERENRTGRSIEDAVRDADGMSESEESEVEQ 478
Query: 442 QEHVSSDIDSDEERRKYDEQLEEVLDQAYENY 473
+E + SDEER + LE LD Y++Y
Sbjct: 479 EEDDDEVLSSDEERERRTAALEGTLDDLYDSY 510
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 151/282 (53%), Gaps = 21/282 (7%)
Query: 544 WFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKMANDAAGPKSTHNQVSE 603
WF Q +F + GDL L +DE + ++ E H+ + + + G + + E
Sbjct: 651 WFDQSVFKDM---GDLAALDGDDEDEDEEMDEDHASDDDSVDSEGDVDMGSDESTLEAPE 707
Query: 604 VEGDFEIVPAPGADSSDDSSSDESEDEEVDTK--------AEILACAKKML-RKKQREQI 654
+ DFEIVP + + DE +DE + K AE A +++ R+ Q+
Sbjct: 708 DDDDFEIVPQEVDEDPEWDVDDEDQDEVLQRKIKEKGILTAEAQTLANRLVNREVTASQL 767
Query: 655 LDDAYNRY-MFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEA 713
+D+ +N+ + DGLP WFL++E +H + P+TKE + A++ + + +DARP KK+AEA
Sbjct: 768 IDEGFNKLSTHNKDGLPSWFLDDESKHYRPNIPITKEAVQALRDRQRALDARPIKKIAEA 827
Query: 714 KARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVP--KRPKKEYVVAK- 770
K RKK A +LE+ +KKA + + D++D K +Q+ +L + A KR +++ VVAK
Sbjct: 828 KGRKKMKAAARLERAKKKAAGVMETEDLNDGEKARQVSRLLRRAAAGEKRQERKVVVAKG 887
Query: 771 --KGVQVR--AGKGKV-LVDPRMKKDSRTHGSGKARKGGSKK 807
KGV+ R KGK +VD RM+K+ R R G K+
Sbjct: 888 VNKGVKGRPKGVKGKYKIVDARMRKEVRAQKRIAKRDKGKKR 929
>gi|73621842|sp|Q5ZKM1.2|RRMJ3_CHICK RecName: Full=pre-rRNA processing protein FTSJ3; AltName:
Full=Protein ftsJ homolog 3; AltName: Full=Putative rRNA
methyltransferase 3; AltName: Full=rRNA
(uridine-2'-O-)-methyltransferase 3
Length = 832
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 147/321 (45%), Positives = 218/321 (67%), Gaps = 9/321 (2%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R DK+Y LAKE G+RSR+++KL+QL+ KF FL+ + A+LDLCAAPGGW+QVA + +P
Sbjct: 8 GKSRRDKFYHLAKETGFRSRSAFKLLQLNRKFQFLQKARALLDLCAAPGGWLQVASKFMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V SLV+G+DLVPI PI V+L++DIT +CR ++K ++ V D+VL+DG+PNVG
Sbjct: 68 VSSLVIGVDLVPIKPIPNVVTLQEDITTEKCRQALRKELQTWKV---DVVLNDGAPNVGA 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
+W +A SQ L + ++KLA +FL G F+TKVFRS+DY +L+ +Q F KV+ KP
Sbjct: 125 SWVHDAYSQANLTLMALKLACEFLCKGGWFITKVFRSRDYQPLLWIFQQFFHKVQATKPQ 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHRDGYE 244
ASR+ SAEI+++ Y+AP KID + D KY F + V + V +++ +K+K +GY
Sbjct: 185 ASRNESAEIFVVCQGYQAPDKIDSKFFDPKYAFKEVEVHAKSVSELV--SKKKPKAEGYA 242
Query: 245 DGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLRV 304
DGDTTL DF+ + NP++ L IT GD +++H TTEE++ C D+RV
Sbjct: 243 DGDTTLYHRFTLMDFLKAPNPVDFLSKANEITLGD---GELENHSSTTEELRQCCKDIRV 299
Query: 305 LGKQDFKHLLKWRMQIKKAFS 325
LG+++ + LL WR ++++ +
Sbjct: 300 LGRKELRALLNWRTKLRRFLT 320
>gi|443898330|dbj|GAC75665.1| putative SAM-dependent rRNA methyltransferase SPB1 [Pseudozyma
antarctica T-34]
Length = 925
Score = 306 bits (783), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 145/340 (42%), Positives = 221/340 (65%), Gaps = 24/340 (7%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
K RLDK+Y LAKE GYRSRA++KLVQL+ K++FL + +DLCAAPGGW+QVA + +P
Sbjct: 10 AKGRLDKFYWLAKEQGYRSRAAFKLVQLNKKYNFLEKARCCIDLCAAPGGWLQVASKYMP 69
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
SL++G+DLVPI PI ++ +DI +CR ++++++++ D+V+HDG+PNVG
Sbjct: 70 ANSLIVGVDLVPIKPIPRTITFAEDINSYKCRDQLRQILKDWKA---DIVIHDGAPNVGT 126
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A +Q+ L + S++LA +FL GTFVTKVFRS+DY+++L+ QLF+KVE KP+
Sbjct: 127 AWVQDAYAQSELTLQSLRLAVEFLNAGGTFVTKVFRSKDYNNLLWVFNQLFKKVEATKPS 186
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF---------------------QGSVEP 224
+SR+ SAEI+++ YK PA+IDP+ LD +++F +G+
Sbjct: 187 SSRNVSAEIFVVCQGYKNPARIDPKFLDPRHVFKELDPATLAQEDQEAGVPLSLKGTSAG 246
Query: 225 RKVVDVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSA 284
+V K +++R+GY DGD TL A DFI + + +LGS I+F
Sbjct: 247 NAHANVFAPKKIRKNREGYADGDYTLFHSLDAMDFIKGQDVIGMLGSYNEISFKSDESKT 306
Query: 285 IKDHELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAF 324
+ D TT+E++ C DL+VLGK+DF++L+ WR +++ A
Sbjct: 307 LLDLPDTTQEMRDNCSDLKVLGKKDFRNLMNWRKEVRLAL 346
>gi|298709155|emb|CBJ31099.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1004
Score = 306 bits (783), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 182/446 (40%), Positives = 268/446 (60%), Gaps = 42/446 (9%)
Query: 1 MGK-VKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQV 59
MGK KG+ R DKYYRLAK+ G+R+R+++KL++++ K+ FL S+ +DLCAAPGGW QV
Sbjct: 1 MGKRTKGQDR-DKYYRLAKDQGFRARSAFKLIEINKKYDFLSSAKVCIDLCAAPGGWCQV 59
Query: 60 AVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDG 119
A + +P GS++LG+DL+PI PI +L DIT ECR +K+ M+ D+VL DG
Sbjct: 60 AAKHMPRGSIILGVDLLPIRPIPNVKTLVHDITTDECRTALKREMQTWKA---DVVLCDG 116
Query: 120 SPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKV 179
+PNVG A+ ++A QN + + ++++ATQ L GTFVTKV+RSQDY+S+++ ++Q FE+
Sbjct: 117 APNVGTAYKKDAYEQNEIALHALRVATQHLKKGGTFVTKVYRSQDYNSLMWVIQQFFEEH 176
Query: 180 EVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTK---- 235
+ KPA+SRS SAEI+++G YKAP ID R+L+ K+ F R+ DV G K
Sbjct: 177 QAVKPASSRSQSAEIFVVGRNYKAPDFIDSRMLEPKHAF------RQDYDVEGGQKGLSI 230
Query: 236 --------QKRHRDGY-EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIK 286
KRHR GY +D +L +V+ +DF+ + +P+ +L + FG C K
Sbjct: 231 FHKKYDQHNKRHRQGYADDLGMSLSRVAKVSDFVNAEDPVRVLTDTHVLEFG-ADCQVFK 289
Query: 287 DHELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGE--- 343
DH TT E++ LC DLRVLGK DF+HL+KWRM++ K + + EGE
Sbjct: 290 DHRATTAEIQHLCSDLRVLGKGDFRHLIKWRMRMVKYLEELKALEGESGDEGDEEGEGGE 349
Query: 344 ---------NEEDADNRVLNEMEELKY-AMDQRKKREKKLLAKKRAKDKARKATGMQIDV 393
EE+ + V E+ L+ A+ QRK+ KK ++ A + R M ++
Sbjct: 350 GGDAAEVPMTEEEKEEEVQAEIRALQLKALAQRKRVRKK---EREAAGRLRSRVAMGMEN 406
Query: 394 MQDDYTDHE-LFSLSSIKGKKDLAAV 418
D D E +FSL+SIK DL ++
Sbjct: 407 TAIDLPDEEGVFSLASIKTGGDLESI 432
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 109/181 (60%), Gaps = 6/181 (3%)
Query: 617 DSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQREQILDDAYNRYMFDDDG-LPDWFLE 675
D D S E D+E +A LA MLRK + ++++D AYNR+ ++DD LPDWF++
Sbjct: 799 DDRDYGSDQEPYDDE--DRARQLALGTMMLRKHRAKEMVDAAYNRFSWNDDADLPDWFVD 856
Query: 676 EERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVI 735
+E+RH + P+ + MK +F + +P KKVAEA+ARK++ A ++L +KKA +
Sbjct: 857 DEKRHYRPQVPLPPALVEQMKNKFMSLATKPIKKVAEARARKRKRAAQRLTNAKKKATAL 916
Query: 736 SDQADISDRSKRKQIEQ-LYKSAVPKRPKKEYVVAKKGVQVRAGKG-KV-LVDPRMKKDS 792
+ D+S+R K K ++Q + K A P K YVVA KG KG K+ +VD RMK D+
Sbjct: 917 AANPDMSEREKLKAVQQAMKKGAKQDIPSKVYVVAGKGPSGTKKKGAKIKMVDARMKSDT 976
Query: 793 R 793
R
Sbjct: 977 R 977
>gi|195133724|ref|XP_002011289.1| GI16447 [Drosophila mojavensis]
gi|193907264|gb|EDW06131.1| GI16447 [Drosophila mojavensis]
Length = 826
Score = 305 bits (782), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 165/360 (45%), Positives = 226/360 (62%), Gaps = 13/360 (3%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R DK+Y+LAKE G+RSRA++KL+QL+ KF FL+ S +DLCAAPGGWMQVA Q +P
Sbjct: 8 GKTRKDKFYQLAKETGFRSRAAFKLIQLNRKFGFLQQSQVCIDLCAAPGGWMQVAKQNMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V S+V+G+DL PI PI G + L +DIT +CR + K ++ D+VLHDG+PNVG
Sbjct: 68 VSSIVIGVDLFPIRPIAGCIGLVEDITTEKCRQSLTKELQSWKA---DVVLHDGAPNVGR 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
W +A Q L ++++KL TQFL G FVTKVFRS+DY+++L+ LKQLF+KV KP+
Sbjct: 125 NWLYDAYQQICLTLNALKLGTQFLRGGGWFVTKVFRSKDYNALLWVLKQLFKKVHATKPS 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQG-SVEPRKVVDVLRGTKQKRHR-DGY 243
ASR SAEI+++ Y AP +IDPRLLD KY+F+ +E ++ +L KQKR + +GY
Sbjct: 185 ASRKESAEIFVVCQGYLAPDRIDPRLLDAKYVFEELDLEGKQKNSLLHPEKQKRVKAEGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLR 303
+ D LR A++F+ + N L L + SI D I H+ TT E+ C DL+
Sbjct: 245 TEQDIALRNDLAASEFMKAENALAALQGIGSIRIDD---ERIAKHKRTTTEILECCKDLK 301
Query: 304 VLGKQDFKHLLKWRMQIKKAFSSAEKATV---PAS--ASAPTEGENEEDADNRVLNEMEE 358
VLG++D K LL W IK+ E V P + AP E ED ++ L + E
Sbjct: 302 VLGRKDIKGLLLWWKHIKEELFKTEPEGVIEEPETDKQPAPLTQEQVEDMEDAELQQQIE 361
>gi|290998754|ref|XP_002681945.1| rRNA (uridine-2'-O-)-methyltransferase [Naegleria gruberi]
gi|284095571|gb|EFC49201.1| rRNA (uridine-2'-O-)-methyltransferase [Naegleria gruberi]
Length = 823
Score = 305 bits (781), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 147/318 (46%), Positives = 211/318 (66%), Gaps = 8/318 (2%)
Query: 8 HRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVG 67
RLDKYY +AKE GYRSRA++KLVQL+ K+ FL ++ +LDLCAAPGGW+QVA + +PV
Sbjct: 10 ERLDKYYHMAKEQGYRSRAAFKLVQLNKKYDFLGTARVMLDLCAAPGGWLQVAKKFMPVN 69
Query: 68 SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAW 127
S ++G+DL PI I +++ DIT + VK V+ D+VLHDG+PNVG W
Sbjct: 70 STLVGVDLCPIKAIPHVTTIQGDITTKKTMTMVKNVLRGQKC---DVVLHDGAPNVGANW 126
Query: 128 AQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAAS 187
++A SQ+ L + ++K+AT+FL P+G F+TKVFRS+DY+S+++ L Q F KVE KP AS
Sbjct: 127 LKDAFSQSELCLFALKMATEFLKPEGLFITKVFRSKDYTSLMWVLNQFFTKVEATKPKAS 186
Query: 188 RSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDV----LRGTKQKRHRDGY 243
R ASAEI+++ YKAP +IDP+L D +F+ +K + + L ++K +R+GY
Sbjct: 187 RDASAEIFVVCFGYKAPKEIDPKLFDASLVFEDVESQKKKLRLSFKDLAQQQKKPNREGY 246
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLR 303
E+G T L K +F+ S+ P++ L + F D A +H LTT+++ C+DLR
Sbjct: 247 EEGMTLLYKKRSIAEFVESDQPIKFLVDYNELEF-DEASQIYLNHPLTTKDIIEACEDLR 305
Query: 304 VLGKQDFKHLLKWRMQIK 321
VLGK DF+ LLKWR +K
Sbjct: 306 VLGKPDFRMLLKWRKNMK 323
>gi|344232036|gb|EGV63915.1| hypothetical protein CANTEDRAFT_105149 [Candida tenuis ATCC 10573]
Length = 819
Score = 305 bits (780), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 196/547 (35%), Positives = 302/547 (55%), Gaps = 59/547 (10%)
Query: 1 MGKVKGKH---RLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGW 56
MGKV+ K+ RLD+YY LAKE GYR+R+S+K++Q++ K+ FL S V+DLCAAPG W
Sbjct: 1 MGKVQKKNSKGRLDRYYHLAKEKGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSW 60
Query: 57 MQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
QVA Q P+ SL++G+D+VPI P+ ++ + DIT +CR++++ M+ D VL
Sbjct: 61 CQVASQLCPINSLIIGVDIVPIKPLPKVITFQSDITTEDCRSKLRGYMKTWKA---DTVL 117
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
HDG+PNVG W Q+A +Q+ L + ++KLA + L+ GTFVTKVFRS+DY+++++ QLF
Sbjct: 118 HDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLSNGGTFVTKVFRSRDYNNLMWVFSQLF 177
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGT 234
EKVE KP ASR+ SAEI+++ +K+P K+DPRLLD K++F+ S +
Sbjct: 178 EKVEATKPPASRTVSAEIFVVCKGFKSPKKLDPRLLDPKHVFEELPSGPQNNEAKIYNPE 237
Query: 235 KQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFG-----DPACSAIKDHE 289
K+KR R GYE+GD L V +F+ + +P+ LG + ++ + +K +
Sbjct: 238 KKKRQRQGYEEGDYLLYHVMPLLEFVKNEDPINTLGDLNKLSVPSKEDEETEFKMVKKLK 297
Query: 290 LTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDAD 349
T E++ DL+VLGK+DFK +LK+R ++ E+ P D
Sbjct: 298 SFTPELQECIKDLKVLGKKDFKLILKFRKHARELLGLDEEEAESEIEVEPL------TED 351
Query: 350 NRVLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDV---MQDDYTDHE-LFS 405
R+ E++EL+ Q+ KREKK + + K+ R M D+ ++ +D + LF+
Sbjct: 352 QRIDKELQELRDKHKQKSKREKKHKNELKQKEIQRMQMNMLTDMNIGIEGATSDSQGLFN 411
Query: 406 LSS----------IKGKKDLAAVEYDD-DDVNAAAEDSEDERPNRDTQEHVSSDIDSDEE 454
L S I+GKK + E D DV D+E ++ +D+E
Sbjct: 412 LRSAEKTGELNKLIQGKKRMIFNEADRIRDVEIDVGDNE--------------EVGTDDE 457
Query: 455 RRKYDEQLEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSD 514
+ LE LD Y +Y KR + RAKK ED DE D +H+ ++D
Sbjct: 458 L----DGLEAQLDDMYHSYQEKRAERDA-KYRAKKLRGDED-----DEPWDGIHSEEEND 507
Query: 515 KDQGDLD 521
++ D +
Sbjct: 508 AEEKDYE 514
>gi|302309076|ref|NP_986282.2| AFR734Cp [Ashbya gossypii ATCC 10895]
gi|442570039|sp|Q751U1.2|SPB1_ASHGO RecName: Full=AdoMet-dependent rRNA methyltransferase SPB1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|299790933|gb|AAS54106.2| AFR734Cp [Ashbya gossypii ATCC 10895]
gi|374109516|gb|AEY98422.1| FAFR734Cp [Ashbya gossypii FDAG1]
Length = 830
Score = 305 bits (780), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 161/402 (40%), Positives = 249/402 (61%), Gaps = 21/402 (5%)
Query: 1 MGKVKGKH---RLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGW 56
MG+ + K+ RLD+YY LAKE GYR+R+S+K++Q++ KF FL S V+DLCAAPG W
Sbjct: 1 MGRTQKKNSKGRLDRYYYLAKEKGYRARSSFKIIQINEKFGHFLEKSKVVIDLCAAPGSW 60
Query: 57 MQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
QVA PV SL++G+D+VP+ P+ ++ + DIT +CR++++ M+ D VL
Sbjct: 61 CQVASNLCPVNSLIIGVDIVPMQPMPNVITFQSDITTEDCRSKLRGYMKTWKA---DTVL 117
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
HDG+PNVG W Q+A +Q+ L + ++KLA + L GTFVTK+FRS+DY+ +++ +QLF
Sbjct: 118 HDGAPNVGLNWVQDAFTQSHLTLQALKLAVENLVVGGTFVTKIFRSKDYNKLMWVFQQLF 177
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVE-PRKV-VDVLRGT 234
+KVE KP ASR+ SAEI+++ +KAP K+DPRLLD K +F+ + P+ + V
Sbjct: 178 DKVEATKPPASRNVSAEIFVVCKGFKAPKKLDPRLLDPKEVFEELPDGPQNMQAKVYNPE 237
Query: 235 KQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF--GDPACSAIKDHELTT 292
K+ R RDGYE+GD L DF+ +P+++LG+ T D +K + TT
Sbjct: 238 KKTRKRDGYEEGDYLLYHTVPIMDFVKVEDPIQMLGTTNKFTLDKDDHEWKIVKKLKQTT 297
Query: 293 EEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRV 352
E KA +DL+VLGK+DFK LL+WR ++ + P + P E + +
Sbjct: 298 PEFKACIEDLKVLGKKDFKMLLRWRKAARELLGLDKDEEQPEIETVPLTEEEQ------I 351
Query: 353 LNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVM 394
E++E++ + +KKREK +K+ + K ++ T MQ+ ++
Sbjct: 352 EKELQEMQQKQNLKKKREK----RKQNEIKQKEITRMQMQMI 389
>gi|302511111|ref|XP_003017507.1| hypothetical protein ARB_04388 [Arthroderma benhamiae CBS 112371]
gi|291181078|gb|EFE36862.1| hypothetical protein ARB_04388 [Arthroderma benhamiae CBS 112371]
Length = 768
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 151/322 (46%), Positives = 208/322 (64%), Gaps = 27/322 (8%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+YRLAKE GYR+RA++KL+QL+ K+ FL S +LDLCAAP
Sbjct: 8 GKGRLDKWYRLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAP------------ 55
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
+G+DL PI PI ++ + DIT +CRA +++ + D VLHDG+PNVG
Sbjct: 56 -----VGVDLSPIKPIPKVITFQSDITTDKCRATIRQHFKTWKA---DTVLHDGAPNVGT 107
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A SQ LV+ S+KLAT+FL P GTFVTKVFRS+DY+ +L+ KQLF VE KP
Sbjct: 108 AWVQDAFSQAELVLQSLKLATEFLVPGGTFVTKVFRSKDYNPLLWVFKQLFTTVEATKPP 167
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ + +KAP IDP+ LD K++F P V K+KR RDGY
Sbjct: 168 SSRNVSAEIFVVCLGFKAPKHIDPKFLDPKHVFAELQDPNPNNEAKVFNPEKKKRKRDGY 227
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+ D T K AT+FI + +P+ ILGS +TF GD A + ++ TT E++
Sbjct: 228 EENDWTQHKELPATEFINTTDPISILGSYNKLTFTQSPGGDLALATLQRLPETTNEIRMC 287
Query: 299 CDDLRVLGKQDFKHLLKWRMQI 320
C+DL+VLGK+DF+ LL+WR+++
Sbjct: 288 CEDLKVLGKKDFRQLLRWRIKM 309
>gi|194894024|ref|XP_001977991.1| GG17939 [Drosophila erecta]
gi|190649640|gb|EDV46918.1| GG17939 [Drosophila erecta]
Length = 816
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 157/333 (47%), Positives = 215/333 (64%), Gaps = 8/333 (2%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R DK+Y+LAKE G RSRA++KL+QL+ KF FL+ S LDLCAAPGGWMQVA Q +P
Sbjct: 8 GKTRKDKFYQLAKETGLRSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPGGWMQVAKQNMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V S+V+G+DL PI PI G + L +DIT +CR + K ++ D+VLHDG+PNVG
Sbjct: 68 VSSIVIGVDLFPIRPIAGCIGLVEDITTEKCRQSLTKELQSWKA---DVVLHDGAPNVGR 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
W +A Q L ++++KL+TQFL G FVTKVFRS+DY+++L+ LKQLF+KV KP+
Sbjct: 125 NWLYDAYQQICLTLNALKLSTQFLRNGGWFVTKVFRSKDYNALLWVLKQLFKKVHATKPS 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQG-SVEPRKVVDVLRGTKQKRHR-DGY 243
ASR SAEI+++ Y AP IDPRLLD KY+F+ ++ +K +L KQKR + +GY
Sbjct: 185 ASRKESAEIFVVCQGYLAPDHIDPRLLDSKYVFEELDLDAKKKSSLLHPEKQKRIKAEGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLR 303
D LR AT+F+ + N L L + SI D I H+ TT E+ C DL+
Sbjct: 245 TAQDIALRNDLAATEFLKAENALAALQGIGSIRIDD---ERIAKHKKTTPEILECCKDLK 301
Query: 304 VLGKQDFKHLLKWRMQIKKAFSSAEKATVPASA 336
+LG++D K L++W +++ F E V A
Sbjct: 302 LLGRKDIKGLVQWWKDVRELFVKKETPLVVGDA 334
>gi|345481436|ref|XP_001599955.2| PREDICTED: putative rRNA methyltransferase 3-like [Nasonia
vitripennis]
Length = 874
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 185/461 (40%), Positives = 269/461 (58%), Gaps = 25/461 (5%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R DKYY LAKE GYRSRA++KL+QL+ KF FL+ S +DLCAAPGGWMQVA + +P
Sbjct: 8 GKQRRDKYYHLAKETGYRSRAAFKLIQLNRKFEFLQKSRVCIDLCAAPGGWMQVAHENMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V S+++G+DL PI P+ G + L DIT +CR + + E D+VL+DG+PNVG
Sbjct: 68 VSSIIVGVDLFPIKPVPGCIGLIGDITTDKCRIDLAR---ELKTWKADVVLNDGAPNVGK 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
W +A Q L + ++KLATQFL P G FVTKVFRS+DY+ +++ KQ+F+KV KP
Sbjct: 125 NWLIDAYQQATLTLSALKLATQFLRPGGWFVTKVFRSKDYNPLIWVFKQMFKKVHATKPQ 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHRD-GY 243
ASR+ SAEI+++ Y APAKIDP+ LD K++F + +EP+ ++V KQK+ + GY
Sbjct: 185 ASRNESAEIFVVCQHYLAPAKIDPKFLDPKHVFAELDLEPKNKLNVFNPEKQKKAKALGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLR 303
+ D TL D+I S + ++ L ++ I D AI +H+ TT+EV C D++
Sbjct: 245 PENDYTLYHRLSVKDYIKSESAIDALQDISEIVIDD---EAILNHKKTTKEVIECCKDIK 301
Query: 304 VLGKQDFKHLLKWRMQI-----KKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEE 358
VLGK+D + LL W + KKA + + T E E++ D ++ ++E
Sbjct: 302 VLGKKDLRLLLNWHKILKDESDKKAEQEKDSENQKEEETPKTLEEVEDEEDEQITKDIER 361
Query: 359 LKYAMDQRKKREKKLLAKKRAKDKARKATGMQID-----VMQDDYTDHELFSLSSIKGKK 413
LK + KR++K + K+R K + M + VM+ D ++FSL I+
Sbjct: 362 LKEEKLRELKRKRKKVNKERTKLNQKLNLNMVLKGDVGPVMEGD----DMFSLKQIQTYD 417
Query: 414 DLAAVEYDDDDVNAAAE---DSEDERPNRDTQEHVSSDIDS 451
L V DV A ++ DSE ++P E S +DS
Sbjct: 418 QLHQVTDQSPDVVAESDSDSDSEVKKPKIVRYEKDSGHLDS 458
>gi|195059568|ref|XP_001995663.1| GH17878 [Drosophila grimshawi]
gi|193896449|gb|EDV95315.1| GH17878 [Drosophila grimshawi]
Length = 836
Score = 304 bits (778), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 179/428 (41%), Positives = 256/428 (59%), Gaps = 25/428 (5%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R DK+Y+LAKE G+RSRA++KL+QL+ K+ FL+ S +DLCAAPGGWMQVA Q +P
Sbjct: 8 GKTRKDKFYQLAKETGFRSRAAFKLIQLNRKYGFLQESQVCVDLCAAPGGWMQVAKQNMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V S+V+G+DL PI I G +SL +DIT +CR + ++ V D+VLHDG+PNVG
Sbjct: 68 VSSIVIGVDLFPIRAIPGCISLVEDITTEKCRQSLTMELQSWKV---DVVLHDGAPNVGR 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
W +A Q L ++++KLATQF+ G FVTKVFRS+DY+S+L+ LKQLF+KV KP+
Sbjct: 125 NWLYDAYQQICLTLNALKLATQFMRKGGWFVTKVFRSKDYNSLLWVLKQLFKKVHATKPS 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-----QGSVEPRKVVDVLRGTKQKRHR 240
ASR SAEI+++ Y AP IDPRLLD KY+F +GS K +L +QKR +
Sbjct: 185 ASRKESAEIFVVCQYYLAPDHIDPRLLDSKYVFEELDLEGS---SKTTSLLHPERQKRIK 241
Query: 241 -DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALC 299
+GY + D +LR A++F+ S+N L L + SIT D I H+ TT E+ C
Sbjct: 242 AEGYTEQDMSLRNDLAASEFMKSDNALAALQGIGSITMDD---ERIAKHKGTTPEILECC 298
Query: 300 DDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEG-----ENEEDADNRVLN 354
DL+VLG++D K LL W ++K+ +K + + E ED ++ L
Sbjct: 299 KDLKVLGRKDIKGLLLWWKRVKEELFKTDKGIIEEQEVEVEQPQPLTQEQIEDMEDAELQ 358
Query: 355 EMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDD----YTDHELFSLSSIK 410
+ L A +++K ++K ++K K + + + DD T+HE+F L IK
Sbjct: 359 QQIGL-LADEEQKDLKRKRKKTLKSKAKLHDKMNLNMVIKGDDGPVEETEHEIFDLRDIK 417
Query: 411 GKKDLAAV 418
+L V
Sbjct: 418 SLNELDEV 425
>gi|194749909|ref|XP_001957378.1| GF10393 [Drosophila ananassae]
gi|190624660|gb|EDV40184.1| GF10393 [Drosophila ananassae]
Length = 817
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 155/326 (47%), Positives = 215/326 (65%), Gaps = 8/326 (2%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R DK+Y+LAKE G+RSRA++KL+QL+ KF FL+ S LDLCAAPGGWMQVA Q +P
Sbjct: 8 GKTRKDKFYQLAKETGFRSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPGGWMQVAKQNMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V S+V+G+DL PI PI G + L +DIT +CR + K ++ D+VLHDG+PNVG
Sbjct: 68 VSSIVIGVDLFPIRPIAGCIGLVEDITTEKCRQSLTKELQTWKA---DVVLHDGAPNVGR 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
W +A Q L ++S+KLATQFL G FVTKVFRS+DY+++L+ LKQLF+KV KP+
Sbjct: 125 NWIYDAYQQICLTLNSLKLATQFLRSGGWFVTKVFRSKDYNALLWVLKQLFKKVHATKPS 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQG-SVEPRKVVDVLRGTKQKRHR-DGY 243
ASR SAEI+++ Y AP ID RLLD KY+F+ +E + +L KQKR + +GY
Sbjct: 185 ASRKESAEIFVVCQGYLAPNHIDHRLLDSKYVFEELDLEAKTKNSLLHPEKQKRIKAEGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLR 303
+ + LR A +F+ + N L L V S+ D I +H+ TT+E+ C DL+
Sbjct: 245 TEKEVALRNELSALEFMQAENALAALQGVGSVVIDD---ERIANHKKTTKEILECCKDLK 301
Query: 304 VLGKQDFKHLLKWRMQIKKAFSSAEK 329
VLG++D K L++W ++++ EK
Sbjct: 302 VLGRKDIKGLIQWWKTVRESLGFQEK 327
>gi|194097365|ref|NP_060117.3| pre-rRNA processing protein FTSJ3 [Homo sapiens]
gi|296452883|sp|Q8IY81.2|RRMJ3_HUMAN RecName: Full=pre-rRNA processing protein FTSJ3; AltName:
Full=Protein ftsJ homolog 3; AltName: Full=Putative rRNA
methyltransferase 3; AltName: Full=rRNA
(uridine-2'-O-)-methyltransferase 3
gi|119614679|gb|EAW94273.1| FtsJ homolog 3 (E. coli), isoform CRA_a [Homo sapiens]
gi|119614680|gb|EAW94274.1| FtsJ homolog 3 (E. coli), isoform CRA_a [Homo sapiens]
gi|119614681|gb|EAW94275.1| FtsJ homolog 3 (E. coli), isoform CRA_a [Homo sapiens]
Length = 847
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 200/585 (34%), Positives = 307/585 (52%), Gaps = 88/585 (15%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
GKV GK R DK+Y LAKE GYRSR+++KL+QL+ +F FL+ + A+LDLCAAPGGW+QVA
Sbjct: 5 GKV-GKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAA 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ +PV SL++G+DLVPI P+ V+L+QDIT CR ++K ++ V D+VL+DG+P
Sbjct: 64 KFMPVSSLIVGVDLVPIKPLPNVVTLQQDITTERCRQALRKELKTWKV---DVVLNDGAP 120
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG +W +A SQ L + +++LA FLA G+F+TKVFRS+DY +L+ +QLF +V+
Sbjct: 121 NVGASWVHDAYSQAHLTLMALRLACDFLARGGSFITKVFRSRDYQPLLWIFQQLFRRVQA 180
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHR 240
KP ASR SAEI+++ + AP K+D + D K+ F + V+ + V +++ TK+K
Sbjct: 181 TKPQASRHESAEIFVVCQGFLAPDKVDSKFFDPKFAFKEVEVQAKTVTELV--TKKKPKA 238
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
+GY +GD TL + TDF+ + NP++ L + I D + H TTE+++ C
Sbjct: 239 EGYAEGDLTLYHRTSVTDFLRAANPVDFLSKASEIMVDD---EELAQHPATTEDIRVCCQ 295
Query: 301 DLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPA-------------SASAPTEGENEED 347
D+RVLG+++ + LL WR ++++ + K A T G ++
Sbjct: 296 DIRVLGRKELRSLLNWRTKLRRYVAKKLKEQAKALDISLSSGEEDEGDEEDSTAGTTKQP 355
Query: 348 AD-----------NRVLNEMEELKYA----------MDQRKKREKKLLAKKRAKDKARKA 386
+ N+ L EM+ + A +QRK+RE+ L
Sbjct: 356 SKEEEEEEEEEQLNQTLAEMKAQEVAELKRKKKKLLREQRKQRERVELKM--------DL 407
Query: 387 TGMQIDVMQDDYTDHELFSLSSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVS 446
G+ I D + +FSLS+I+G + L V D +AA+ + P D
Sbjct: 408 PGVSI----ADEGETGMFSLSTIRGHQLLEEVTQGD---MSAADTFLSDLPRDDI---YV 457
Query: 447 SDIDSDEERRKYDEQLEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDT 506
SD++ D + D E RG +G D+
Sbjct: 458 SDVEDD------GDDTSLDSDLDPEELAGVRG-------------------HQGLRDQKR 492
Query: 507 MHTSYDSDKDQGDLDANPLMVPLDDGIRPTQEEITNKWFSQEIFA 551
M + D + + + NPL+VPL++ QEE N WFS+ FA
Sbjct: 493 MRLTEVQDDKEEEEEENPLLVPLEEKA-VLQEEQANLWFSKGSFA 536
>gi|17553860|ref|NP_497655.1| Protein H06I04.3, isoform a [Caenorhabditis elegans]
gi|351063960|emb|CCD72251.1| Protein H06I04.3, isoform a [Caenorhabditis elegans]
Length = 833
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 185/435 (42%), Positives = 260/435 (59%), Gaps = 22/435 (5%)
Query: 1 MGK-VK-GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQ 58
MGK VK GK R DKYY+LAKE GYRSRA++KLVQL+ +F FL S A +DLCAAPGGWMQ
Sbjct: 1 MGKKVKIGKQRRDKYYKLAKEAGYRSRAAFKLVQLNKRFEFLEKSRATVDLCAAPGGWMQ 60
Query: 59 VAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
VA Q +PV SL++G+DL PI PI+ ++L+ DIT E RA +KK E + D VLHD
Sbjct: 61 VASQFMPVSSLIVGVDLAPIKPIKNCIALQGDITTNETRAAIKK---ELKTWSADCVLHD 117
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+PNVG W +A QN L + ++KLATQ L GTFVTKVFRS DYS ++ ++LF++
Sbjct: 118 GAPNVGLNWVHDAFQQNCLTLSALKLATQILRKGGTFVTKVFRSNDYSCLIRVFEKLFKR 177
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQG-----SVEPRKVVDVLRG 233
V V KPAASR SAEI+++ Y+ P K+ LD K +F +P ++L G
Sbjct: 178 VHVWKPAASRLESAEIFVVCEVYQKPDKVGAEYLDPKKVFANPDGSEGTKPNP-QNLLIG 236
Query: 234 TKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTE 293
++K +GY+ + ATDFI S+ L+ILG+ IT D K+HE TTE
Sbjct: 237 KQKKAKAEGYDTDSLAIHSTINATDFIKSSGYLDILGTANVITLDDEKW---KNHEKTTE 293
Query: 294 EVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGEN--EEDADNR 351
EV +D++VLG ++ + LL+WR + + KA + E EN EE ++R
Sbjct: 294 EVIEYMNDVKVLGPRELRVLLRWRKSMLETLEEQRKAVEGEAKEVEIE-ENLTEEQLEDR 352
Query: 352 VLNEMEEL--KYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDD---YTDHELFSL 406
+ E++EL K + D++ +KK +AK + K +++ + D+ D E+F L
Sbjct: 353 AMAEIDELIAKASEDEKAALKKKKKKMLKAKARVLKRRELKMIIDGDEGPQAEDQEVFQL 412
Query: 407 SSIKGKKDLAAVEYD 421
I+ K+LA + D
Sbjct: 413 KKIRKAKELAEITKD 427
>gi|254584860|ref|XP_002497998.1| ZYRO0F18304p [Zygosaccharomyces rouxii]
gi|186928984|emb|CAQ43309.1| AdoMet-dependent rRNA methyltransferase SPB1 [Zygosaccharomyces
rouxii]
gi|238940891|emb|CAR29065.1| ZYRO0F18304p [Zygosaccharomyces rouxii]
Length = 839
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 161/386 (41%), Positives = 237/386 (61%), Gaps = 20/386 (5%)
Query: 1 MGKV---KGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGW 56
MGK K RLDKYY LAKE GYR+R+S+K++Q++ KF FL S V+DLCAAPG W
Sbjct: 1 MGKTDKKNSKGRLDKYYHLAKEKGYRARSSFKVIQINEKFGHFLEKSKVVIDLCAAPGSW 60
Query: 57 MQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
QVA + PV SL+LG+D+VP+ P+ ++ + DIT +CR++++ M+ D VL
Sbjct: 61 CQVASKLCPVNSLILGVDIVPMRPMPNVITFQSDITTEDCRSKLRGYMKTWKA---DTVL 117
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
HDG+PNVG W Q+A SQ+ L + ++KLA + L GTFVTK+FRS+DY+ +++ +QLF
Sbjct: 118 HDGAPNVGLGWVQDAFSQSQLTLQALKLAVENLVVNGTFVTKIFRSKDYNKLMWVFQQLF 177
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ------GSVEPRKVVDV 230
EKVE KP ASR+ SAEI+++ +KAP K+DPRLLD K +F+ ++E R V
Sbjct: 178 EKVEATKPPASRNVSAEIFVVCRGFKAPKKLDPRLLDPKEVFEELPDKPQNMEAR----V 233
Query: 231 LRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF--GDPACSAIKDH 288
K R R+GYEDGD L T+FI +P+ +LG + T+ + +K
Sbjct: 234 FNPDKHTRKREGYEDGDNLLYHEMPLTEFIMHEDPIYLLGYMNKFTYDENNHDWKIVKKL 293
Query: 289 ELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEK-ATVPASASAPTEGENEED 347
+ TT E A +DL+VLGK++FK +LKWR ++ +K P P + E + D
Sbjct: 294 KQTTGEFLACIEDLKVLGKKEFKMILKWRKAARELLGVDKKEEEAPKIEVQPLDEEEQID 353
Query: 348 ADNRVLNEMEELKYAMDQRKKREKKL 373
+ + L E + L+ ++R++ E K+
Sbjct: 354 KELQSLQEKQRLEQKRERRRRNEAKM 379
>gi|50285125|ref|XP_444991.1| hypothetical protein [Candida glabrata CBS 138]
gi|73621936|sp|Q6FX63.1|SPB1_CANGA RecName: Full=AdoMet-dependent rRNA methyltransferase SPB1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|49524294|emb|CAG57891.1| unnamed protein product [Candida glabrata]
Length = 837
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 150/325 (46%), Positives = 215/325 (66%), Gaps = 11/325 (3%)
Query: 1 MGKVKGKH---RLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGW 56
MGK + K+ RLD+YY LAKE GYR+R+S+K++Q++ KF FL S V+DLCAAPG W
Sbjct: 1 MGKTQKKNSKGRLDRYYYLAKEKGYRARSSFKIIQINEKFGHFLEKSKVVIDLCAAPGSW 60
Query: 57 MQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
QVA + PV SL++G+D+VP+ P+ ++ + DIT +CR+R++ M+ D VL
Sbjct: 61 CQVASKLCPVNSLIIGVDIVPMKPMPNVITFQSDITTEDCRSRLRGYMKTWKA---DTVL 117
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
HDG+PNVG WAQ+A +Q+ L + ++KLA + L GTFVTK+FRS+DY+ +++ +QLF
Sbjct: 118 HDGAPNVGLGWAQDAFTQSHLTLQALKLAVENLVVNGTFVTKIFRSKDYNKLIWVFQQLF 177
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVE-PRKV-VDVLRGT 234
EKVE KP ASR+ SAEI+++ +KAP K+DPRLLD K +F+ + P+ + +
Sbjct: 178 EKVEATKPPASRNVSAEIFVVCKGFKAPKKLDPRLLDPKEVFEELPDGPQNMEAKIYNPE 237
Query: 235 KQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF--GDPACSAIKDHELTT 292
K+ R R GYE+GD L DF+ S +P+ +LG + T DP +K + TT
Sbjct: 238 KKVRKRQGYEEGDHLLYHECSVLDFVKSEDPITVLGEMNKFTVEQDDPEWKILKRLKQTT 297
Query: 293 EEVKALCDDLRVLGKQDFKHLLKWR 317
E A +DL+VLGK+DFK LLKWR
Sbjct: 298 NEFMACIEDLKVLGKKDFKMLLKWR 322
>gi|326933959|ref|XP_003213065.1| PREDICTED: putative rRNA methyltransferase 3-like [Meleagris
gallopavo]
Length = 811
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 146/321 (45%), Positives = 217/321 (67%), Gaps = 9/321 (2%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R DK+Y LAKE G+RSR+++KL+QL+ KF FL+ + A+LDLCAAPGGW+QVA + +P
Sbjct: 8 GKSRRDKFYHLAKETGFRSRSAFKLLQLNRKFQFLQKARALLDLCAAPGGWLQVASKFMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V SLV+G+DLVPI PI V+L++DIT +CR ++K ++ V D+VL+DG+PNVG
Sbjct: 68 VSSLVIGVDLVPIKPIPNVVTLQEDITTEKCRQALRKELQTWKV---DVVLNDGAPNVGS 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
+W +A SQ L + ++KLA +FL G F+TKVFRS+DY +L+ +Q F KV+ KP
Sbjct: 125 SWVHDAYSQANLTLMALKLACEFLCKGGWFITKVFRSRDYQPLLWIFQQFFHKVQATKPQ 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHRDGYE 244
ASR+ SAEI+++ Y+AP KID + D KY F + V + V +++ +K+K +GY
Sbjct: 185 ASRNESAEIFVVCQGYQAPDKIDSKFFDPKYAFKEVEVHAKSVSELV--SKKKPKAEGYA 242
Query: 245 DGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLRV 304
DGDTTL DF+ + NP++ L I GD +++H TTEE++ C D+RV
Sbjct: 243 DGDTTLYHRFTLMDFLKAPNPVDFLSKANEIMLGD---GELENHSSTTEELRQCCKDIRV 299
Query: 305 LGKQDFKHLLKWRMQIKKAFS 325
LG+++ + LL WR ++++ +
Sbjct: 300 LGRKELRALLNWRTKLRRFLT 320
>gi|71987561|ref|NP_001022635.1| Protein H06I04.3, isoform c [Caenorhabditis elegans]
gi|351063962|emb|CCD72253.1| Protein H06I04.3, isoform c [Caenorhabditis elegans]
Length = 786
Score = 303 bits (775), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 185/435 (42%), Positives = 260/435 (59%), Gaps = 22/435 (5%)
Query: 1 MGK-VK-GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQ 58
MGK VK GK R DKYY+LAKE GYRSRA++KLVQL+ +F FL S A +DLCAAPGGWMQ
Sbjct: 1 MGKKVKIGKQRRDKYYKLAKEAGYRSRAAFKLVQLNKRFEFLEKSRATVDLCAAPGGWMQ 60
Query: 59 VAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
VA Q +PV SL++G+DL PI PI+ ++L+ DIT E RA +KK E + D VLHD
Sbjct: 61 VASQFMPVSSLIVGVDLAPIKPIKNCIALQGDITTNETRAAIKK---ELKTWSADCVLHD 117
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+PNVG W +A QN L + ++KLATQ L GTFVTKVFRS DYS ++ ++LF++
Sbjct: 118 GAPNVGLNWVHDAFQQNCLTLSALKLATQILRKGGTFVTKVFRSNDYSCLIRVFEKLFKR 177
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQG-----SVEPRKVVDVLRG 233
V V KPAASR SAEI+++ Y+ P K+ LD K +F +P ++L G
Sbjct: 178 VHVWKPAASRLESAEIFVVCEVYQKPDKVGAEYLDPKKVFANPDGSEGTKPNP-QNLLIG 236
Query: 234 TKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTE 293
++K +GY+ + ATDFI S+ L+ILG+ IT D K+HE TTE
Sbjct: 237 KQKKAKAEGYDTDSLAIHSTINATDFIKSSGYLDILGTANVITLDDEKW---KNHEKTTE 293
Query: 294 EVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGEN--EEDADNR 351
EV +D++VLG ++ + LL+WR + + KA + E EN EE ++R
Sbjct: 294 EVIEYMNDVKVLGPRELRVLLRWRKSMLETLEEQRKAVEGEAKEVEIE-ENLTEEQLEDR 352
Query: 352 VLNEMEEL--KYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDD---YTDHELFSL 406
+ E++EL K + D++ +KK +AK + K +++ + D+ D E+F L
Sbjct: 353 AMAEIDELIAKASEDEKAALKKKKKKMLKAKARVLKRRELKMIIDGDEGPQAEDQEVFQL 412
Query: 407 SSIKGKKDLAAVEYD 421
I+ K+LA + D
Sbjct: 413 KKIRKAKELAEITKD 427
>gi|320170532|gb|EFW47431.1| FtsJ cell division protein [Capsaspora owczarzaki ATCC 30864]
Length = 1045
Score = 302 bits (774), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 157/364 (43%), Positives = 226/364 (62%), Gaps = 15/364 (4%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R DK+Y+LAKE GYRSRA++KL+QL+ K++FL +S +LDLCAAPGGW+QVA + +P
Sbjct: 8 GKTRRDKFYKLAKEAGYRSRAAFKLIQLNRKYNFLGTSRVLLDLCAAPGGWLQVASKHMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V S+++G+D V I PI + L +DIT +CRA ++K E G + D VLHDG+PNVG
Sbjct: 68 VSSVIIGVDRVQIKPIHNVICLTEDITTDKCRAAIRK--ETKGWKV-DCVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
+W Q+A +Q ALV+ S+K+A + L G ++TKVFRS DY+++++ +Q F+KV KP
Sbjct: 125 SWTQDAYTQAALVLMSLKIACEHLGQGGWYITKVFRSADYNALVWVFQQFFKKVHATKPQ 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRHRD-GYE 244
ASR+ SAEI+++ Y P KIDPR+ D KY+F P K VD++ K+ + GY
Sbjct: 185 ASRNESAEIFVVCQGYNKPDKIDPRMFDPKYIFSEVEAPAKPVDLMSDKPAKKAKAVGYP 244
Query: 245 DGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGD----------PACSAIKDHELTTEE 294
DGD + A F+ + P+ L I F D P S H TT+E
Sbjct: 245 DGDAGFHRQLSAQTFVLCDEPITFLAQAARIVFDDSPGIDPVTKRPLPSIYLTHRETTDE 304
Query: 295 VKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKAT-VPASASAPTEGENEEDADNRVL 353
+KA C D+RVLGK + K+LL+WR+ +++ + EK + A+ E+ E A R
Sbjct: 305 IKACCADIRVLGKSEVKNLLRWRLLMREYSDALEKLSGGKKKAALAAADESPETALKRAR 364
Query: 354 NEME 357
+EME
Sbjct: 365 SEME 368
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 116/213 (54%), Gaps = 21/213 (9%)
Query: 601 VSEVEGD-FEIVPAPGADSSDDSSSDESEDEEV-----------DTKAEILACAKKMLRK 648
++ V D FEIVPA D D++ + E E LA ML +
Sbjct: 823 INSVSADGFEIVPAENVARHDSDDDDDAPEGETPKERSLRLKKQSLTPEGLALGTLMLSR 882
Query: 649 KQREQILDDAYNRYMFDDD-GLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPA 707
++ ++D +Y+RY F D +P WF E+E +H Q P+TK+ + + + ++++A P
Sbjct: 883 AKKRDLVDASYHRYAFADKLEMPSWFAEDEVQHIQPTLPITKQMVREYRQRLRDLNATPI 942
Query: 708 KKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKK--- 764
KKVAEAKARK+ R + K ++KA I+D D+++ K +QI +L KS+ R KK
Sbjct: 943 KKVAEAKARKRMRLERNVTKAKQKAQAINDAPDLTEAQKARQIAKLMKSS--SRQKKVDV 1000
Query: 765 EYVVAKK--GVQVRAGKGKV-LVDPRMKKDSRT 794
+Y+VA+K + R KG +VD RMKK+ R+
Sbjct: 1001 KYIVARKDGSSKPRGMKGPYKMVDGRMKKEVRS 1033
>gi|342887818|gb|EGU87247.1| hypothetical protein FOXB_02229 [Fusarium oxysporum Fo5176]
Length = 819
Score = 302 bits (773), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 162/395 (41%), Positives = 234/395 (59%), Gaps = 30/395 (7%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+YRLAKE G R+RA++KL+QL+ KF FL S V+DLCAAPG W+QV + P
Sbjct: 8 GKGRLDKWYRLAKEKGLRARAAFKLIQLNKKFGFLEQSKVVIDLCAAPGSWLQVCRETCP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
G++++G DL I PI G +S + DIT ECR +++ ++ D VLHDG+PNVG
Sbjct: 68 TGAILIGCDLDYIKPIPGVLSFQSDITSSECRNTLRQHLKTWKA---DAVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q++ +Q L + S+KLAT+FL G FV+KVFRS++Y+S L+ L QLF KV+ P
Sbjct: 125 AWVQDSFNQVELALQSLKLATEFLRAGGVFVSKVFRSKEYNSFLWVLNQLFTKVDATSPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVE--PRKVVDVLRGTKQKRHRDGY 243
ASR K+DPRLLD KY+F + P V +KR RDGY
Sbjct: 185 ASRQ----------------KLDPRLLDPKYVFAEFQDPTPNNEAKVYNPEVKKRKRDGY 228
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+GD T K A++FI + +P+ +LGS ++F GD A +A+ TT+E++
Sbjct: 229 EEGDFTQFKEMAASEFIQTTDPIAVLGSYNRLSFKQPPNGDVALAALDKLPETTDEIRNC 288
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEE 358
C DLRVLG++DFK LLKWR++++ F S D + ++ E++
Sbjct: 289 CSDLRVLGRKDFKILLKWRLKMRDIFQLKTPQAATVEESEEVAEVESMDEELKIQEELQN 348
Query: 359 LKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDV 393
+K + ++KREK +K + K R+ MQ+++
Sbjct: 349 MKDRENTKRKREK----RKENERKQREVVRMQLNM 379
>gi|238882966|gb|EEQ46604.1| AdoMet-dependent rRNA methyltransferase SPB1 [Candida albicans
WO-1]
Length = 737
Score = 302 bits (773), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 236/762 (30%), Positives = 380/762 (49%), Gaps = 98/762 (12%)
Query: 1 MGKVKGKH---RLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGW 56
MGK + KH RLD+YY LAKE GYR+R+S+K++Q++ K+ FL S V+DLCAAPG W
Sbjct: 3 MGKQQKKHSKGRLDRYYYLAKEKGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSW 62
Query: 57 MQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
QVA Q P+ SL++G+D+VPI P+ ++ + DIT +CR+R++ M+ D VL
Sbjct: 63 CQVASQLCPINSLIIGVDIVPIKPLPNVITFQSDITTEDCRSRLRGHMKTWKA---DTVL 119
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
HDG+PNVG W Q+A +Q+ L + ++KLA + L GTFVTK+FRS+DY+++++ +QLF
Sbjct: 120 HDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLTAGGTFVTKIFRSRDYNNLMWVFQQLF 179
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ---GSVEPR-----KVV 228
EKVE KP ASR+ SAEI+++ +KAP K+DPRLLD K +F+ G E + K+
Sbjct: 180 EKVEATKPPASRNVSAEIFVVCKGFKAPKKLDPRLLDPKEVFEELGGGNESKQNNEAKIF 239
Query: 229 DVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDP-------- 280
+ + + Q R R GY++GD TL DFI ++P+ LGS+ P
Sbjct: 240 NPEKFSSQ-RQRQGYQEGDYTLFHTMPIMDFIKQDDPINQLGSLNKFDLPAPKDDDNDDH 298
Query: 281 --ACSAIKDHELTTEEVKALCDDLRVLGKQDFKHLLKWRMQ------IKKAFSSAEKATV 332
+ +L T E+ DL+VLGK++FK +LK+R Q I K ++
Sbjct: 299 DHEWKILSKLKLCTPELLECIKDLKVLGKKEFKMILKFRKQARDILGIDKDEEEEKEENP 358
Query: 333 PASASAPTEGENEEDADNRVLNEMEELKYAMDQRKKREKK----LLAKKRAKDKARKATG 388
TE + ++ E+++L Q+ KR KK L K+ +++ T
Sbjct: 359 EIEVEPLTE-------EQKIDQELQDLINKQKQKAKRLKKNANELKQKEIIRNQMNMLTD 411
Query: 389 MQIDVMQDDYTDHELFSLSS----------IKGKKDLAAVEYDDDDVNAAAEDSEDERPN 438
M I + LF+L + KGKK + DE
Sbjct: 412 MNIGIEAAQIGADSLFNLKTAEKTGQLDKLAKGKKKMIF---------------NDEELA 456
Query: 439 RDTQEHVSSDIDSDEERRKYDE--QLEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQ-ED 495
+D + H+ + +D ++ DE +LE LD Y Y A++ RAK+A +D
Sbjct: 457 KDNEIHIDEEEINDNDKDSADELDELENQLDDMYHQYQARKAERDANY-RAKQARGDADD 515
Query: 496 QLSEGDEDEDTMHTSYDSDKDQGDLDANPLMVPLDDGIRPTQEEITNKWFS---QEIFAE 552
+ G ED D + + D ++++ D+ IR E+ +N S + FA
Sbjct: 516 EAWNGIEDNDDVESGKDY-----EMESESDDDDDDEHIRLIAEKKSNGSLSRTARNFFAS 570
Query: 553 AVQNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKMA-NDAAGPKSTHNQVSEVEGDFEIV 611
+LG +E + + + E ++++A ++ ++ E E DFEIV
Sbjct: 571 DSIFNELGDDVILEEIENKTKGRNGKMVESIQEQVANDNNENDDGDNDDNDEEESDFEIV 630
Query: 612 PAPGAD----------------SSDDSSSDESEDEEVDTKAEILACAKKMLRKKQREQIL 655
P +D S+ S+ + ++ T + + L +K + ++
Sbjct: 631 PNQKSDDDDDDDESMDSDDDEVSTTTKSTTHQQKVDLATVEAMTLAHQVALGQKNKYDLI 690
Query: 656 DDAYNRYMF-DDDGLPDWFLEEERRHRQAIRPVTKEEIAAMK 696
D+ NRY F D D LP+ F+++E++H + I K++ +K
Sbjct: 691 DEGINRYSFRDKDNLPERFIDDEKKHSKLINASLKKQQLPLK 732
>gi|195479104|ref|XP_002100764.1| GE17245 [Drosophila yakuba]
gi|194188288|gb|EDX01872.1| GE17245 [Drosophila yakuba]
Length = 819
Score = 302 bits (773), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 161/354 (45%), Positives = 221/354 (62%), Gaps = 16/354 (4%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R DK+Y+LAKE G RSRA++KL+QL+ KF FL+ S LDLCAAPGGWMQVA Q +P
Sbjct: 8 GKTRKDKFYQLAKETGLRSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPGGWMQVAKQNMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V S+V+G+DL PI PI G + L +DIT +CR + K ++ D+VLHDG+PNVG
Sbjct: 68 VSSIVIGVDLFPIRPIAGCIGLVEDITTEKCRQSLTKELQSWKA---DVVLHDGAPNVGR 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
W +A Q L ++++KL+T FL G FVTKVFRS+DY+++L+ LKQLF+KV KP+
Sbjct: 125 NWLYDAYQQICLTLNALKLSTLFLRNGGWFVTKVFRSKDYNALLWVLKQLFKKVHATKPS 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQG-SVEPRKVVDVLRGTKQKRHR-DGY 243
ASR SAEI+++ Y AP IDPRLLD KY+F+ ++ +K +L KQKR + +GY
Sbjct: 185 ASRKESAEIFVVCQGYLAPDHIDPRLLDSKYVFEELDLDAKKKSSLLHPEKQKRIKAEGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLR 303
D LR AT+F+ + N L L + SI D I H+ TT E+ C DL+
Sbjct: 245 TAQDIALRNDLAATEFMKAENALAALQGIGSIRIDD---ERIAKHKKTTPEILECCKDLK 301
Query: 304 VLGKQDFKHLLKWRMQIKKAFSSAEKATV--------PASASAPTEGENEEDAD 349
+LG++D K L++W +++ F E V P E E+ EDA+
Sbjct: 302 LLGRKDIKGLMQWWKDVRELFVKKETPLVVGDGEEEKPKKPLTQAEIEDMEDAE 355
>gi|170574558|ref|XP_001892866.1| rRNA methyltransferase [Brugia malayi]
gi|158601360|gb|EDP38288.1| rRNA methyltransferase, putative [Brugia malayi]
Length = 789
Score = 301 bits (772), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 155/320 (48%), Positives = 208/320 (65%), Gaps = 11/320 (3%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R DKYY LAKE GYRSRA++KL+QL+ +F FL+ S AV+DLCAAPGGW+QVA+Q +P
Sbjct: 8 GKQRRDKYYHLAKEAGYRSRAAFKLLQLNKRFEFLQKSRAVVDLCAAPGGWLQVAIQNMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V S+ +G+DLVPI PI V+L+ DIT + R V+K E HG A D VLHDG+PNVG
Sbjct: 68 VSSICIGVDLVPIKPINKCVTLQGDITTEKTRQMVRK--ELHGWEA-DCVLHDGAPNVGR 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
W Q+A QN L + +++LATQ L G FVTK+FRS DY ++ ++LF++V V KPA
Sbjct: 125 NWVQDAFQQNCLTLSALRLATQILTKNGIFVTKIFRSSDYCHLISVFEKLFKQVHVWKPA 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-----QGSVEPRKVVDVLRGTKQKRHR 240
ASR SAEI+++ KY P K+DP LLD K +F Q + +++ R +K
Sbjct: 185 ASRLESAEIFVVCEKYLKPEKLDPDLLDPKKVFAESTQQSVISNPQLMLQPRAKLKKVPA 244
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
GYE+ +L K ATDFI SNN LE+L S I D ++E TT+EVK +
Sbjct: 245 TGYENESVSLHKTINATDFIHSNNYLELLASAYKIALDD---ERWLNNESTTDEVKCCLE 301
Query: 301 DLRVLGKQDFKHLLKWRMQI 320
D++V G ++ + +LKWR I
Sbjct: 302 DIKVCGPRELRLILKWRRNI 321
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 104/174 (59%), Gaps = 7/174 (4%)
Query: 637 EILACAKKML-RKKQREQILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAM 695
E+LA ++++ K R + D +NRY +D+GLPDWF+E+E++H + PV+K+ +
Sbjct: 600 ELLALGEQLIYSSKTRRDLEDWGWNRYTNNDEGLPDWFVEDEKKHFKKELPVSKDRVDFY 659
Query: 696 KAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYK 755
K + ++I+ R KKVAEAKARKK+ RKL+ +K+A I + ++ K ++I +LY+
Sbjct: 660 KNRMRDINTRTIKKVAEAKARKKKRRDRKLQLAKKRAEGIIESENMEQAEKIREIRKLYR 719
Query: 756 ---SAVPKRPKKEYVVAKKGVQVRAGKGK---VLVDPRMKKDSRTHGSGKARKG 803
S++ ++ K Y V KG + + K +VD R+KKD+R +KG
Sbjct: 720 KTASSIKEKKKITYAVMTKGKRGSLSRPKGPYKVVDARLKKDNRRQKQMNQKKG 773
>gi|71987550|ref|NP_497656.2| Protein H06I04.3, isoform b [Caenorhabditis elegans]
gi|351063961|emb|CCD72252.1| Protein H06I04.3, isoform b [Caenorhabditis elegans]
Length = 716
Score = 301 bits (772), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 185/435 (42%), Positives = 260/435 (59%), Gaps = 22/435 (5%)
Query: 1 MGK-VK-GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQ 58
MGK VK GK R DKYY+LAKE GYRSRA++KLVQL+ +F FL S A +DLCAAPGGWMQ
Sbjct: 1 MGKKVKIGKQRRDKYYKLAKEAGYRSRAAFKLVQLNKRFEFLEKSRATVDLCAAPGGWMQ 60
Query: 59 VAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
VA Q +PV SL++G+DL PI PI+ ++L+ DIT E RA +KK E + D VLHD
Sbjct: 61 VASQFMPVSSLIVGVDLAPIKPIKNCIALQGDITTNETRAAIKK---ELKTWSADCVLHD 117
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+PNVG W +A QN L + ++KLATQ L GTFVTKVFRS DYS ++ ++LF++
Sbjct: 118 GAPNVGLNWVHDAFQQNCLTLSALKLATQILRKGGTFVTKVFRSNDYSCLIRVFEKLFKR 177
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQG-----SVEPRKVVDVLRG 233
V V KPAASR SAEI+++ Y+ P K+ LD K +F +P ++L G
Sbjct: 178 VHVWKPAASRLESAEIFVVCEVYQKPDKVGAEYLDPKKVFANPDGSEGTKPNP-QNLLIG 236
Query: 234 TKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTE 293
++K +GY+ + ATDFI S+ L+ILG+ IT D K+HE TTE
Sbjct: 237 KQKKAKAEGYDTDSLAIHSTINATDFIKSSGYLDILGTANVITLDD---EKWKNHEKTTE 293
Query: 294 EVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGEN--EEDADNR 351
EV +D++VLG ++ + LL+WR + + KA + E EN EE ++R
Sbjct: 294 EVIEYMNDVKVLGPRELRVLLRWRKSMLETLEEQRKAVEGEAKEVEIE-ENLTEEQLEDR 352
Query: 352 VLNEMEEL--KYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDD---YTDHELFSL 406
+ E++EL K + D++ +KK +AK + K +++ + D+ D E+F L
Sbjct: 353 AMAEIDELIAKASEDEKAALKKKKKKMLKAKARVLKRRELKMIIDGDEGPQAEDQEVFQL 412
Query: 407 SSIKGKKDLAAVEYD 421
I+ K+LA + D
Sbjct: 413 KKIRKAKELAEITKD 427
>gi|268571471|ref|XP_002641056.1| Hypothetical protein CBG22467 [Caenorhabditis briggsae]
Length = 827
Score = 301 bits (771), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 193/472 (40%), Positives = 273/472 (57%), Gaps = 25/472 (5%)
Query: 1 MGK-VK-GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQ 58
MGK VK GK R DKYY+LAKE GYRSRA++KLVQL+ +F FL S A +DLCAAPGGWMQ
Sbjct: 1 MGKKVKIGKQRRDKYYKLAKEAGYRSRAAFKLVQLNKRFEFLEKSRATVDLCAAPGGWMQ 60
Query: 59 VAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
VA Q +PV SL++G+DL PI PI+ ++L+ DIT E RA +KK E + D VLHD
Sbjct: 61 VASQFMPVSSLIVGVDLAPIKPIKNCIALQGDITTNETRAAIKK---ELKTWSADCVLHD 117
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+PNVG W +A QN L + ++KLATQ L GTFVTKVFRS DYS ++ ++LF++
Sbjct: 118 GAPNVGLNWVHDAFQQNCLTLSALKLATQILRKGGTFVTKVFRSNDYSCLIRVFEKLFKR 177
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQG-----SVEPRKVVDVLRG 233
V V KPAASR SAEI+++ Y+ P K+ LD K +F +P ++L G
Sbjct: 178 VHVWKPAASRLESAEIFVVCEVYQKPEKVGAEYLDPKKVFANPDGSEGTKPNP-QNMLIG 236
Query: 234 TKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTE 293
++K +GY+ + A+DFI S+ L+ILG I DP K+HE TTE
Sbjct: 237 KQKKAKAEGYDTNSLAIHSKVNASDFIKSSGYLDILGEANVILLDDPKW---KNHEKTTE 293
Query: 294 EVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGE-NEEDADNRV 352
EV D++VLG ++ + LL+WR + + + KA + E + EE ++R
Sbjct: 294 EVVEYMKDVKVLGPRELRVLLRWRKSMLETLEAERKAVEGEAQDVEIEEDLTEEQIEDRA 353
Query: 353 LNEMEEL--KYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDD---YTDHELFSLS 407
+ E++EL K + D++ +KK +AK + K +++ + D+ D E+F L
Sbjct: 354 MAEIDELIAKASEDEKAALKKKKKKMLKAKARVLKRRELKMIIDGDEGPQAEDQEVFQLK 413
Query: 408 SIKGKKDLAAVEYDDDDVN-AAAEDSEDERPNRD----TQEHVSSDIDSDEE 454
I+ K+LA + + + EDS+DE D T E DSDE+
Sbjct: 414 KIRKAKELAEITKETQAPDFENVEDSDDEEGLGDGEWETHEQEVGGEDSDED 465
>gi|340378878|ref|XP_003387954.1| PREDICTED: putative rRNA methyltransferase 3-like [Amphimedon
queenslandica]
Length = 782
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 178/437 (40%), Positives = 259/437 (59%), Gaps = 26/437 (5%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
DK+Y LAKE GYR+R+++KL+QL+ KF FL+ S ++DLCAAPGGW+QVA Q +PV SL+
Sbjct: 13 DKFYHLAKETGYRARSAFKLIQLNRKFQFLQKSRVLIDLCAAPGGWLQVASQHMPVSSLI 72
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DLV I PI A++++ DIT P CR ++K ++ V D VL+DG+PNVG AW Q+
Sbjct: 73 IGVDLVSIKPIPNAITIQADITTPNCRHLIQKELKTWKV---DCVLNDGAPNVGSAWIQD 129
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
A SQ L + ++KLAT FL P G FVTKVFRS+DY +L ++LF+KV KP ASRS
Sbjct: 130 AFSQARLTLSALKLATDFLKPGGWFVTKVFRSKDYQQLLNVFQKLFKKVHATKPQASRSE 189
Query: 191 SAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRHRD---GYEDGD 247
SAEI+++ +Y K D +LLD K++F+ EP + + QK + GY +G
Sbjct: 190 SAEIFVVCQEYLVKGKPDEKLLDPKFVFEEQ-EPLEKPKITLQNIQKHTKSSSTGYPEGQ 248
Query: 248 TTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLRVLGK 307
L DFI S++ + +L S F D H LTTEE+K LC D++VLG
Sbjct: 249 HVLFNSLPVVDFILSDDHMSVLASSHQFVF-DKTSEVFNKHPLTTEEIKELCSDIKVLGL 307
Query: 308 QDFKHLLKWRMQIKKAF---SSAEKATVPASASAPTEGE-NEEDADNRVLNEMEE----- 358
++ K L+KWR ++K+ S +E + A + E + +E DA + L + E+
Sbjct: 308 KELKVLIKWRAKMKEFLDQVSDSEDESGTKGAGSDNEMDLSEVDARVKELAKEEKAELKS 367
Query: 359 -LKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSIKGKKDLAA 417
L+Y QR+K E++L +++ D TG ++ +LFSL+ IK L
Sbjct: 368 ILRYKRKQRRKVEERLKSQQEEDD---PVTGEVTSGGKE-----KLFSLNHIKTSSQLEE 419
Query: 418 VEYDDDDVNAAAEDSED 434
VE +D D +A D E+
Sbjct: 420 VEGEDIDGDALETDDEE 436
>gi|332243108|ref|XP_003270724.1| PREDICTED: pre-rRNA processing protein FTSJ3 [Nomascus leucogenys]
Length = 840
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 202/590 (34%), Positives = 312/590 (52%), Gaps = 87/590 (14%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
GKV GK R DK+Y LAKE GYRSR+++KL+QL+ +F FL+ + A+LDLCAAPGGW+QVA
Sbjct: 5 GKV-GKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAA 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ +PV SL++G+DLVPI P+ V+L++DIT CR ++K ++ V D+VL+DG+P
Sbjct: 64 KFMPVSSLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWKV---DVVLNDGAP 120
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG +W +A SQ L + +++LA FLA G F+TKVFRS+DY +L+ +QLF +V+
Sbjct: 121 NVGASWVHDAYSQAHLTLMALRLACDFLARGGCFITKVFRSRDYQPLLWIFQQLFRRVQA 180
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHR 240
KP ASR SAEI+++ + AP K+D + D K+ F + V+ + V +++ TK+K
Sbjct: 181 TKPQASRHESAEIFVVCQGFLAPDKVDSKFFDPKFAFKEVEVQAKTVTELV--TKKKPKA 238
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
+GY +GD TL + TDF+ + NP++ L + I D + H TTE+++ C
Sbjct: 239 EGYAEGDLTLYHRTSVTDFLRAANPVDFLSKASEIMVDD---EELAQHPATTEDIRVCCQ 295
Query: 301 DLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPA-------------SASAPTEGENEED 347
D+RVLG+++ + LL WR ++++ + K A T G ++
Sbjct: 296 DIRVLGRKELRSLLNWRTKLRRYVAKKLKEQAKALDISLSSGEEDEGDEEDSTAGTTKQP 355
Query: 348 AD---------NRVLNEMEELKYA----------MDQRKKREKKLLAKKRAKDKARKATG 388
+ N+ L EM+ + A +QRK+RE+ L G
Sbjct: 356 SKEEEEEEEQLNQTLAEMKAQEVAELKRKKKKLLREQRKQRERVELKM--------DLPG 407
Query: 389 MQIDVMQDDYTDHELFSLSSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSD 448
+ I D + +FSL +I+G + L V D +AA+ + P D SD
Sbjct: 408 VSI----ADEGETGMFSLRTIRGHQLLEEVTQGD---MSAADTFLSDLPRDDI---YVSD 457
Query: 449 IDSDEERRKYDEQLEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMH 508
++ D + D L+ LD E RG +G D+ +
Sbjct: 458 VEDDGD----DTSLDSGLDP--EELAGVRG-------------------HQGLRDQKRVQ 492
Query: 509 TSYDSDKDQGDLDANPLMVPLDDGIRPTQEEITNKWFSQEIFAEAVQNGD 558
+ D + + + NPL+VPL++ QEE N WFS+ FAE + D
Sbjct: 493 LTEVEDDKEEE-EENPLLVPLEEKA-VLQEEQANLWFSKGSFAEIQDDAD 540
>gi|431908880|gb|ELK12472.1| Putative rRNA methyltransferase 3 [Pteropus alecto]
Length = 844
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 203/582 (34%), Positives = 311/582 (53%), Gaps = 88/582 (15%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
GKV GK R DK+Y LAKE GYRSR+++KL+QL+ +F FL+ + A+LDLCAAPGGW+QVA
Sbjct: 5 GKV-GKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAA 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ +PV SL++G+DLVPI PI V+L++DIT CR +KK ++ V D+VL+DG+P
Sbjct: 64 KFMPVSSLIVGVDLVPIKPIPNVVTLQEDITTERCRQALKKELKTWKV---DVVLNDGAP 120
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG +W +A SQ L + +++LA FLA G F+TKVFRS+DY +L+ +QLF V+
Sbjct: 121 NVGASWVHDAYSQAHLTLMALRLACDFLARGGCFITKVFRSRDYQPLLWIFQQLFRHVQA 180
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHR 240
KP ASR SAEI+++ + AP K+D + D K+ F + V+ + V +++ TK+K
Sbjct: 181 TKPQASRHESAEIFVVCQGFLAPDKVDNKFFDPKFAFKEVEVQAKTVTELV--TKKKPKA 238
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
+GY +GD TL + TDF+ + NP++ L + I+ D + H TTE+++ C
Sbjct: 239 EGYAEGDLTLYHRTSVTDFLRAANPVDFLSKASEISLDD---EELAQHPATTEDIRMSCQ 295
Query: 301 DLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPA---------------------SASAP 339
D++VLG+++ + LL WR ++++ + K A + P
Sbjct: 296 DIKVLGRKELRSLLNWRTKLRRHVAKKLKEQAKALDISLSSGEEEEEGEEESTAGTMRQP 355
Query: 340 TEGENEEDADNRVLNEMEELKYA----------MDQRKKREKKLLAKKRAKDKARKATGM 389
+E E EE+ NR L EM+ + A +QRK+RE+ L G+
Sbjct: 356 SEEEEEEEQLNRTLAEMKAQEVAELKRKKKKLLREQRKQRERVELKM--------DLPGV 407
Query: 390 QIDVMQDDYTDHELFSLSSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDI 449
I D + +FSL +I+G + L V D +AA+ + P D +VS
Sbjct: 408 SI----ADEGETGMFSLRTIRGHQLLKEVTQGD---MSAADTFLSDLPRDDI--YVSDTE 458
Query: 450 DSDEERRKYDEQLEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHT 509
D D+ D EE+ RG +++ D
Sbjct: 459 DDDDASLDSDLDPEEL--------AGVRGPQSLK---------------------DQRRV 489
Query: 510 SYDSDKDQGDLDANPLMVPLDDGIRPTQEEITNKWFSQEIFA 551
+ DK + + + NPL+VPL++ QEE N WFS++ F+
Sbjct: 490 RFVDDKKEEEEEENPLLVPLEEKA-VLQEEQANLWFSKDSFS 530
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/210 (40%), Positives = 124/210 (59%), Gaps = 21/210 (10%)
Query: 608 FEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQREQILDDAYNRYMFDDD 667
FEIVP +D D E I+A +KK R ++D++++RY F++D
Sbjct: 646 FEIVPI------EDPVKHRILDPEGLALGAIIASSKKAKR-----DLIDNSFSRYTFNED 694
Query: 668 G--LPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKL 725
LPDWF++EE++HR P+ K+E+ + +++EI+ARP KKVAEAKARKKR ++KL
Sbjct: 695 EGELPDWFVQEEKQHRIRQLPIDKKEVEHYRKRWREINARPIKKVAEAKARKKRRMLKKL 754
Query: 726 EKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKE--YVVAKKGV--QVRAGKGK 781
E+ +KKA + + DIS+R K Q+ LY+ A + K++ YVVAKKGV +VR G
Sbjct: 755 EQTKKKAEAVVNTVDISEREKVAQLRSLYRKAGLGKEKRQVTYVVAKKGVGRKVRRPAGV 814
Query: 782 V----LVDPRMKKDSRTHGSGKARKGGSKK 807
+VD RMKKD R + +K +K
Sbjct: 815 RGHFKVVDSRMKKDQRAQQRKEQKKKSRRK 844
>gi|312372717|gb|EFR20615.1| hypothetical protein AND_19798 [Anopheles darlingi]
Length = 890
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 152/331 (45%), Positives = 219/331 (66%), Gaps = 14/331 (4%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
GKV GK R DK+Y+LAKE GYRSRA++KL+QL+ +F+FL+ S +DLCAAPGGWMQVA
Sbjct: 5 GKV-GKDRKDKFYKLAKESGYRSRAAFKLIQLNRRFAFLQQSQVCIDLCAAPGGWMQVAK 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
Q +PV S+V+G+DL PI + G +SL DIT + ++ + K ++ D+VL+DG+P
Sbjct: 64 QNMPVSSIVIGVDLYPIKNVPGCISLVGDITSDKTKSDLAKELKTWKA---DVVLNDGAP 120
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG W +A Q L + +VKLATQFL P G F+TKVFRS+DY+++++ LKQLF+KV
Sbjct: 121 NVGKNWLHDAYQQVCLTLSAVKLATQFLRPGGWFITKVFRSKDYNALIWVLKQLFKKVHA 180
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQG-SVEPRK------VVDVLRGT 234
KP+ASR SAEI+++ Y+AP KIDPR LD KY+F+ +EP+ + ++ R
Sbjct: 181 TKPSASRKESAEIFVVCQHYRAPDKIDPRFLDSKYVFEELDIEPKDGAGLNILKELERKV 240
Query: 235 KQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEE 294
+K +GY+ D +RK+ A +F+ PL +L VT I F + I +H TT E
Sbjct: 241 AKKPKVEGYDSTD--VRKIVTAREFLQQEKPLPVLSRVTEIRFTETDAD-IANHPRTTAE 297
Query: 295 VKALCDDLRVLGKQDFKHLLKWRMQIKKAFS 325
+K C D+++LG++D K LL+W + F+
Sbjct: 298 LKECCKDIKILGRKDMKELLRWHKLLHPEFA 328
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/220 (39%), Positives = 121/220 (55%), Gaps = 23/220 (10%)
Query: 588 ANDA-AGPKSTHNQVSEV---EGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAK 643
A DA A K H V +V +G FEIV A +E E LA +
Sbjct: 644 AEDALANGKPHHKTVEKVAGADGGFEIVSAEATRKPKKIKLNEQE----------LALGQ 693
Query: 644 KMLR-KKQREQILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEI 702
++ KK R I+D A+NRYMF+D LP WF+E+E + + PV ++ + + E
Sbjct: 694 MLVSGKKMRRDIIDAAWNRYMFNDSHLPSWFVEDEMKTMRRDLPVPEDAVDRYRKTKDEF 753
Query: 703 DARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRP 762
+ R KKV EAKARKKR A ++LEK++KKA I + D +++ K + +++LYK A K+
Sbjct: 754 NVRTIKKVMEAKARKKRHATKRLEKIKKKAESIMENVDNTNQEKIRLLKKLYKKADAKKK 813
Query: 763 KKEYVVAKK----GVQVRAGKGK----VLVDPRMKKDSRT 794
+ YVVAKK G +VR KG +VDPRMKKD R+
Sbjct: 814 EVTYVVAKKSGTSGKKVRRPKGVEGRFKVVDPRMKKDRRS 853
>gi|348560345|ref|XP_003465974.1| PREDICTED: putative rRNA methyltransferase 3-like [Cavia porcellus]
Length = 838
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 202/586 (34%), Positives = 319/586 (54%), Gaps = 91/586 (15%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
GKV GK R DK+Y LAKE GYRSR+++KL+QL+ +F FL+ + A+LDLCAAPGGW+QVA
Sbjct: 5 GKV-GKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAA 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ +PV SL++G+DLVPI P+ V+L++DIT CR ++K ++ V D+VL+DG+P
Sbjct: 64 KFMPVSSLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWKV---DVVLNDGAP 120
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG +W +A SQ L + +++LA FLA G F+TKVFRS+DY +L+ +QLF +V+
Sbjct: 121 NVGASWVHDAYSQAHLTLMALRLACDFLARGGCFITKVFRSRDYQPLLWIFQQLFRRVQA 180
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHR 240
KP ASR SAEI+++ + AP K+D + D K+ F + V+ + V +++ TK+K
Sbjct: 181 TKPQASRHESAEIFVVCQGFLAPDKVDSKFFDPKFAFKEVEVQAKTVTELV--TKKKPKA 238
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
+GY +GD TL + TDF+ + NP++ L + I+ D + H TTE+++A C
Sbjct: 239 EGYAEGDLTLYHRTSVTDFLRAANPVDFLSKASEISIDD---KELAQHPATTEDIQACCQ 295
Query: 301 DLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPA---------------------SASAP 339
D++VLG+++ + LL WR ++++ + K A + P
Sbjct: 296 DIKVLGRKELRSLLNWRTKLRRYMAKKLKEQAKALDISLSSGEEEGDEEEESTTETTRQP 355
Query: 340 TEGENEEDADNRVLNEMEELKYA----------MDQRKKREKKLLAKKRAKDKARKATGM 389
++ E EE+ N+ L EM+ + A +QRK+RE+ L G+
Sbjct: 356 SKEEEEEEQLNQTLAEMKAQEVAELKRKKKKLLREQRKQRERVELKM--------DLPGV 407
Query: 390 QIDVMQDDYTDHELFSLSSIKGKKDLAAVEYDDDDVNAA----AEDSEDERPNRDTQEHV 445
I D + +FSL +I+G + L E D+NAA ++ D+ D +E
Sbjct: 408 SI----ADEGETGMFSLRTIQGHQLLE--EVTQGDMNAADRLLSDLPRDDIYVSDAEEDN 461
Query: 446 SSDIDSDEERRKYDEQLEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDED 505
S +DSD LD E G +++ ++ + ED+ E +E+E+
Sbjct: 462 GSSLDSD-------------LDP--EELAGVGGHQSLKDQKCVRFAQLEDKEEEEEEEEE 506
Query: 506 TMHTSYDSDKDQGDLDANPLMVPLDDGIRPTQEEITNKWFSQEIFA 551
NPL++PL++ QEE N WFS++ F+
Sbjct: 507 E----------------NPLLIPLEEKT-VLQEEQANLWFSKDGFS 535
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 124/211 (58%), Gaps = 28/211 (13%)
Query: 593 GPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQRE 652
GPKS N FEIVP ++ D E ++A +KK R
Sbjct: 632 GPKSDDN-------GFEIVPI------ENPVKHRILDPEGLALGAVIASSKKAKR----- 673
Query: 653 QILDDAYNRYMFDDDG--LPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKV 710
++D+++NRY F++D LPDWF++EE++HR P+ K+E+ + ++KEI+ARP KKV
Sbjct: 674 DLIDNSFNRYAFNEDEGELPDWFVQEEKQHRIRQLPLDKKEVEHYRKRWKEINARPIKKV 733
Query: 711 AEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKE--YVV 768
AEAKARKKR ++KLE+ +KKA + + DIS+R K Q+ LYK A + K++ YVV
Sbjct: 734 AEAKARKKRRMLKKLEQTKKKAEAVVNTVDISEREKVAQLRSLYKKAGLGKEKRQVTYVV 793
Query: 769 AKKGV--QVRAGKGKV----LVDPRMKKDSR 793
AKKGV +VR G +VD RMKKD R
Sbjct: 794 AKKGVGRKVRRPAGVRGHFKVVDSRMKKDQR 824
>gi|23331072|gb|AAH36710.1| FtsJ homolog 3 (E. coli) [Homo sapiens]
gi|123983012|gb|ABM83247.1| FtsJ homolog 3 (E. coli) [synthetic construct]
gi|123997695|gb|ABM86449.1| FtsJ homolog 3 (E. coli) [synthetic construct]
gi|189054652|dbj|BAG37502.1| unnamed protein product [Homo sapiens]
gi|307685131|dbj|BAJ20496.1| FtsJ homolog 3 [synthetic construct]
Length = 847
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 198/585 (33%), Positives = 306/585 (52%), Gaps = 88/585 (15%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
GKV GK R DK+Y LAKE GYRSR+++KL+QL+ +F FL+ + A+LDLCAAPGGW+QVA
Sbjct: 5 GKV-GKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAA 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ +PV SL++G+DLVPI P+ V+L++DIT CR ++K ++ V D+VL+DG+P
Sbjct: 64 KFMPVSSLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWKV---DVVLNDGAP 120
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG +W +A SQ L + +++LA FLA G+F+TKVFRS+DY +L+ +QLF +V+
Sbjct: 121 NVGASWVHDAYSQAHLTLMALRLACDFLARGGSFITKVFRSRDYQPLLWIFQQLFRRVQA 180
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHR 240
KP ASR SAEI+++ + AP K+D + D K+ F + V+ + V +++ TK+K
Sbjct: 181 TKPQASRHESAEIFVVCQGFLAPDKVDSKFFDPKFAFKEVEVQAKTVTELV--TKKKPKA 238
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
+GY +GD TL + TDF+ + NP++ L + I D + H TTE+++ C
Sbjct: 239 EGYAEGDLTLYHRTSVTDFLRAANPVDFLSKASEIMVDD---EELAQHPATTEDIRVCCQ 295
Query: 301 DLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPA-------------SASAPTEGENEED 347
D+RVLG+++ + LL WR ++++ + K A T G ++
Sbjct: 296 DIRVLGRKELRSLLNWRTKLRRYVAKKLKEQAKALDISLSSGEEDEGDEEDSTAGTTKQP 355
Query: 348 AD-----------NRVLNEMEELKYA----------MDQRKKREKKLLAKKRAKDKARKA 386
+ N+ L EM+ + A +QRK+RE+ L
Sbjct: 356 SKEEEEEEEEEQLNQTLAEMKAQEVAELKRKKKKLLREQRKQRERVELKM--------DL 407
Query: 387 TGMQIDVMQDDYTDHELFSLSSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVS 446
G+ I D + +FSL +I+G + L V D +AA+ + P D
Sbjct: 408 PGVSI----ADEGETGMFSLCTIRGHQLLEEVTQGD---MSAADTFLSDLPRDDI---YV 457
Query: 447 SDIDSDEERRKYDEQLEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDT 506
SD++ D + D E RG +G D+
Sbjct: 458 SDVEDD------GDDTSLDSDLDPEELAGVRG-------------------HQGLRDQKR 492
Query: 507 MHTSYDSDKDQGDLDANPLMVPLDDGIRPTQEEITNKWFSQEIFA 551
M + D + + + NPL+VPL++ QEE N WFS+ FA
Sbjct: 493 MRLTEVQDDKEEEEEENPLLVPLEEKA-VLQEEQANLWFSKGSFA 536
>gi|18028291|gb|AAL56015.1|AF327355_1 hypothetical protein SB92 [Homo sapiens]
Length = 847
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 198/585 (33%), Positives = 306/585 (52%), Gaps = 88/585 (15%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
GKV GK R DK+Y LAKE GYRSR+++KL+QL+ +F FL+ + A+LDLCAAPGGW+QVA
Sbjct: 5 GKV-GKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAA 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ +PV SL++G+DLVPI P+ V+L++DIT CR ++K ++ V D+VL+DG+P
Sbjct: 64 KFMPVSSLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWKV---DVVLNDGAP 120
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG +W +A SQ L + +++LA FLA G+F+TKVFRS+DY +L+ +QLF +V+
Sbjct: 121 NVGASWVHDAYSQAHLTLMALRLACDFLARGGSFITKVFRSRDYQPLLWIFQQLFRRVQA 180
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHR 240
KP ASR SAEI+++ + AP K+D + D K+ F + V+ + V +++ TK+K
Sbjct: 181 TKPQASRHESAEIFVVCQGFLAPDKVDSKFFDPKFAFKEVEVQAKTVTELV--TKKKPKA 238
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
+GY +GD TL + TDF+ + NP++ L + I D + H TTE+++ C
Sbjct: 239 EGYAEGDLTLYHRTSVTDFLRAANPVDFLSKASEIMVDD---IELAQHPATTEDIRVCCQ 295
Query: 301 DLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPA-------------SASAPTEGENEED 347
D+RVLG+++ + LL WR ++++ + K A T G ++
Sbjct: 296 DIRVLGRKELRSLLNWRTKLRRYVAKKLKEQAKALDISLSSGEEDEGDEEDSTAGTTKQP 355
Query: 348 AD-----------NRVLNEMEELKYA----------MDQRKKREKKLLAKKRAKDKARKA 386
+ N+ L EM+ + A +QRK+RE+ L
Sbjct: 356 SKEEEEEEEEEQLNQTLAEMKAQEVAELKRKKKKLLREQRKQRERVELKM--------DL 407
Query: 387 TGMQIDVMQDDYTDHELFSLSSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVS 446
G+ I D + +FSL +I+G + L V D +AA+ + P D
Sbjct: 408 PGVSI----ADEGETGMFSLCTIRGHQLLEEVTQGD---MSAADTFLSDLPRDDI---YV 457
Query: 447 SDIDSDEERRKYDEQLEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDT 506
SD++ D + D E RG +G D+
Sbjct: 458 SDVEDD------GDDTSLDSDLDPEELAGVRG-------------------HQGLRDQKR 492
Query: 507 MHTSYDSDKDQGDLDANPLMVPLDDGIRPTQEEITNKWFSQEIFA 551
M + D + + + NPL+VPL++ QEE N WFS+ FA
Sbjct: 493 MRLTEVQDDKEEEEEENPLLVPLEEKA-VLQEEQANLWFSKGSFA 536
>gi|395532979|ref|XP_003768541.1| PREDICTED: putative rRNA methyltransferase 3 [Sarcophilus harrisii]
Length = 836
Score = 299 bits (766), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 210/591 (35%), Positives = 307/591 (51%), Gaps = 107/591 (18%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
GKV GK R DK+Y LAKE G+RSR+++KL+ L+ F FL+ + A+LDLCAAPGGW+QVA
Sbjct: 5 GKV-GKSRRDKFYHLAKETGFRSRSAFKLIHLNRPFQFLQKARALLDLCAAPGGWLQVAS 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ +PV SL++G+DLVPI PI V+L++DIT CR +KK ++ V D+VL+DG+P
Sbjct: 64 KFMPVSSLIVGVDLVPIKPIPNVVTLQEDITTDRCRQALKKELKTWKV---DVVLNDGAP 120
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG +W +A SQ L + +++LA FLA G F+TKVFRS+DY ++L+ +QLF V+
Sbjct: 121 NVGASWVHDAYSQAHLTLMALRLACDFLARGGCFITKVFRSRDYQALLWIFQQLFRHVQA 180
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHR 240
KP ASR SAEI+++ + AP KID + D K+ F + V+ + V +++ TK+K
Sbjct: 181 TKPQASRQESAEIFVVCQGFLAPDKIDSKFFDPKFAFKEVEVQAKTVSELV--TKKKPKA 238
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
+GY DGD TL TDF+ + NP++ L + I D ++ H T E+VK C
Sbjct: 239 EGYADGDLTLYHRVSITDFLRAANPVDFLSKASEIILDD---KELELHPATNEDVKVYCQ 295
Query: 301 DLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEG------------------ 342
D++VLG+++ + LL WR ++++ + K A + + G
Sbjct: 296 DIKVLGRKELRSLLNWRTKLRRFVAKKLKDQAKALDISLSSGEEEEEEEQEEGKKTTLAA 355
Query: 343 -ENEEDADNRVLNEMEELKYA----------MDQRKKREKKLLAKKRAKDKARKATGMQI 391
+ EED D R L EM+ + A +QRK+RE+ L K +
Sbjct: 356 KDEEEDLD-RALAEMKAQEVAELKRKKKKLLQEQRKQRERVEL----------KMDLPGV 404
Query: 392 DVMQDDYTDHELFSLSSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDT---------- 441
+ D T +FSL +I+G + L V + AA+ E P D
Sbjct: 405 SIADDGETG--MFSLRTIRGHQLLQEVAQGN---MGAADKFLLEEPESDIYLSDEENEDA 459
Query: 442 -QEHVSSDIDSDEERRKYDEQLEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQEDQLSEG 500
E ++SD+D +E LE V +G RKR K A Q + E
Sbjct: 460 DDESLASDLDPEE--------LEGV-----------KGYGAPSRKRVKFAEEQSQEEEEQ 500
Query: 501 DEDEDTMHTSYDSDKDQGDLDANPLMVPLDDGIRPTQEEITNKWFSQEIFA 551
D NPL+VPL++ QEE TN WFS+ FA
Sbjct: 501 D---------------------NPLLVPLEEKA-VLQEEQTNLWFSKGGFA 529
>gi|363747754|ref|XP_003644095.1| hypothetical protein Ecym_1019 [Eremothecium cymbalariae
DBVPG#7215]
gi|356887727|gb|AET37278.1| hypothetical protein Ecym_1019 [Eremothecium cymbalariae
DBVPG#7215]
Length = 750
Score = 299 bits (765), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 156/385 (40%), Positives = 243/385 (63%), Gaps = 14/385 (3%)
Query: 1 MGKVKGKH---RLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGW 56
MGK + K+ RLD+YY LAKE GYR+R+S+K++Q++ K+ FL S V+DLCAAPG W
Sbjct: 1 MGKTQKKNSKGRLDRYYYLAKEKGYRARSSFKVIQINEKYGHFLEKSKVVIDLCAAPGSW 60
Query: 57 MQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
QVA PV SL++G+D+VP+ P+ ++ + DIT +CR++++ M+ D VL
Sbjct: 61 CQVAANLCPVNSLIIGVDIVPMKPMTNVITFQSDITTEDCRSKLRGYMKTWKA---DTVL 117
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
HDG+PNVG +W Q+A +Q+ L + ++KLA + L GTFVTKVFRS+DY+ +++ +QLF
Sbjct: 118 HDGAPNVGLSWVQDAFTQSHLTLQALKLAVENLVVGGTFVTKVFRSKDYNKLIWVFQQLF 177
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVE-PRKV-VDVLRGT 234
EKVE KP ASR+ SAEI+++ +KAP K+DPRLLD K +F+ + P+ + V
Sbjct: 178 EKVEATKPPASRNVSAEIFVVCKGFKAPKKLDPRLLDPKEVFEELPDGPQNMQAKVYNPE 237
Query: 235 KQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFG--DPACSAIKDHELTT 292
K+ R RDGY++ D L + DF+ +P+++LG + T D +K + TT
Sbjct: 238 KKVRKRDGYKENDYLLYHEAPIMDFVKVEDPIQMLGELNRFTIDKEDNEWKILKTLKQTT 297
Query: 293 EEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRV 352
E KA +DL+VLG++DFK LL+WR ++ ++ P + P EE+ +
Sbjct: 298 TEFKACIEDLKVLGRKDFKMLLRWRKAARELLGLDKEEENPEVETVPL---TEEEQIEKE 354
Query: 353 LNEMEELKYAMDQRKKREKKLLAKK 377
L +M++ + M +R+KR++ + +K
Sbjct: 355 LQDMQDKQRLMKKREKRKQNEMKQK 379
>gi|255732365|ref|XP_002551106.1| hypothetical protein CTRG_05404 [Candida tropicalis MYA-3404]
gi|240131392|gb|EER30952.1| hypothetical protein CTRG_05404 [Candida tropicalis MYA-3404]
Length = 632
Score = 299 bits (765), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 169/448 (37%), Positives = 264/448 (58%), Gaps = 36/448 (8%)
Query: 1 MGKVKGKH---RLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGW 56
MGK + KH RLD+YY LAKE GYR+R+S+K++Q++ K+ FL S V+DLCAAPG W
Sbjct: 1 MGKQQKKHSKGRLDRYYYLAKEKGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSW 60
Query: 57 MQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
QVA Q PV SL++G+D+VPI P+ ++ + DIT +CR+R++ M+ D VL
Sbjct: 61 CQVASQLCPVNSLIIGVDIVPIKPLPNVITFQSDITTEDCRSRLRGHMKTWKA---DTVL 117
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
HDG+PNVG W Q+A +Q+ L + ++KLA + LA GTFVTK+FRS+DY+++++ +QLF
Sbjct: 118 HDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLAAGGTFVTKIFRSRDYNNLMWVFQQLF 177
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGT 234
EKVE KP ASR+ SAEI+++ +KAP K+DPRLLD K +F+ G+ + V
Sbjct: 178 EKVEATKPPASRNVSAEIFVVCKGFKAPKKLDPRLLDPKEVFEELGAEKQNNEAKVFNPE 237
Query: 235 K--QKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHE--- 289
K R R GYE+GD TL +FI +P++ LG++ D +DHE
Sbjct: 238 KFASTRQRQGYEEGDYTLYHTMPIMEFIKEEDPIDKLGTLNKFDIPDKN----EDHEWKI 293
Query: 290 -----LTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGEN 344
+ T E+ DL+VLGK++FKHL+++R + + +K P + E
Sbjct: 294 ITKSKIFTPELAECAKDLKVLGKKEFKHLIRFRQKARDLLGLNDKVD-----KTPIDVEE 348
Query: 345 EEDADNRVLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVM--------QD 396
E + + ++ E++EL M+++K++ K L + +A+ K + D + D
Sbjct: 349 ELNDEEKIDRELQELMQKMEKQKQKRVKKLREIKAQSKQASKNVFEFDSIFAGLESFGDD 408
Query: 397 DYTDHELFSLSSIKGKKDLAAVEYDDDD 424
+ +E+ + ++ + A +E D+DD
Sbjct: 409 IFIQNEMDNKAAAESGDIDAGIEIDEDD 436
>gi|388453901|ref|NP_001253060.1| putative rRNA methyltransferase 3 [Macaca mulatta]
gi|355568824|gb|EHH25105.1| hypothetical protein EGK_08867 [Macaca mulatta]
gi|380809448|gb|AFE76599.1| putative rRNA methyltransferase 3 [Macaca mulatta]
gi|383415675|gb|AFH31051.1| putative rRNA methyltransferase 3 [Macaca mulatta]
gi|384945206|gb|AFI36208.1| putative rRNA methyltransferase 3 [Macaca mulatta]
Length = 843
Score = 298 bits (764), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 198/582 (34%), Positives = 308/582 (52%), Gaps = 85/582 (14%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
GKV GK R DK+Y LAKE GYRSR+++KL+QL+ +F FL+ + A+LDLCAAPGGW+QVA
Sbjct: 5 GKV-GKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAA 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ +PV SL++G+DLVPI P+ V+L++DIT CR ++K ++ V D+VL+DG+P
Sbjct: 64 KFMPVSSLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWKV---DVVLNDGAP 120
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG +W +A SQ L + +++LA FLA G F+TKVFRS+DY +L+ +QLF +V+
Sbjct: 121 NVGASWVHDAYSQAHLTLMALRLACDFLARGGCFITKVFRSRDYQPLLWIFQQLFRRVQA 180
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHR 240
KP ASR SAEI+++ + AP K+D + D K+ F + V+ + V +++ TK+K
Sbjct: 181 TKPQASRHESAEIFVVCQGFLAPDKVDSKFFDPKFAFKEVEVQAKTVTELV--TKKKPKA 238
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
+GY +GD TL + TDF+ + NP++ L + I D + H TTE+++ C
Sbjct: 239 EGYAEGDLTLYHRTSVTDFLRAANPVDFLSKASEIMVDD---EELAQHPATTEDIRVCCQ 295
Query: 301 DLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPA---------------------SASAP 339
D+RVLG+++ + LL WR ++++ + K A P
Sbjct: 296 DIRVLGRKELRLLLNWRTKLRRYVAKKLKEQAKALDISLSSGEEDEGDEEDSTAGITKQP 355
Query: 340 TEGENEEDADNRVLNEMEELKYA----------MDQRKKREKKLLAKKRAKDKARKATGM 389
++ E EE+ N+ L EM+ + A +QRK+RE+ L G+
Sbjct: 356 SKEEEEEEQLNQTLAEMKAQEVAELKRKKKKLLREQRKQRERVELKM--------DLPGI 407
Query: 390 QIDVMQDDYTDHELFSLSSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDI 449
I D + +FSL +I+G + L V D +AA+ + P D SD+
Sbjct: 408 SI----ADEGETGMFSLRTIRGHQLLEEVTQGD---MSAADTFLSDLPRDDI---YVSDV 457
Query: 450 DSDEERRKYDEQLEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHT 509
+ D + D L+ E RG ++ D+ +
Sbjct: 458 EDDGDDTSADSDLDP------EELAGVRGHQDLR-------------------DQKRVRF 492
Query: 510 SYDSDKDQGDLDANPLMVPLDDGIRPTQEEITNKWFSQEIFA 551
+ D + + + NPL+VPL++ QEE N WFS+ F
Sbjct: 493 TEVEDDKEEEEEENPLLVPLEEKA-ILQEEQANLWFSKGSFV 533
>gi|367012579|ref|XP_003680790.1| hypothetical protein TDEL_0C06900 [Torulaspora delbrueckii]
gi|359748449|emb|CCE91579.1| hypothetical protein TDEL_0C06900 [Torulaspora delbrueckii]
Length = 829
Score = 298 bits (763), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 178/492 (36%), Positives = 276/492 (56%), Gaps = 39/492 (7%)
Query: 1 MGKVKGKH---RLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGW 56
MGK + K+ RLD+YY LAKE GYR+R+S+K++Q++ K+ FL S V+DLCAAPG W
Sbjct: 1 MGKTQKKNSKGRLDRYYYLAKEKGYRARSSFKVIQINEKYGHFLEKSKVVIDLCAAPGSW 60
Query: 57 MQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
QVA + P+ SL++G+D+VP+ PI ++ + DIT +CR++++ M+ D VL
Sbjct: 61 CQVAAKLCPINSLIVGVDIVPMKPIPNVITFQSDITTEDCRSKLRGYMKTWKA---DTVL 117
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
HDG+PNVG W Q+A +Q+ L + ++KLA + L GTFVTKVFRS+DY+ +++ +QLF
Sbjct: 118 HDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLVVNGTFVTKVFRSKDYNKLIWVFQQLF 177
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVE-PRKV-VDVLRGT 234
+KVE KP ASR+ SAEI+++ YKAP ++DPRLLD K +F+ + P+ + V
Sbjct: 178 DKVEATKPPASRNVSAEIFVVCRGYKAPKRLDPRLLDPKEVFEELPDGPQNMEAKVYNPE 237
Query: 235 KQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPA--CSAIKDHELTT 292
K+ R R GYEDGD L + +F+ + +P+ +LG + T + +K + TT
Sbjct: 238 KKVRKRQGYEDGDHLLYHETSILEFVKTEDPITMLGQMNKFTIDEDEKDWKIVKKLKQTT 297
Query: 293 EEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRV 352
E+ DL+VLGK+DFK LL+WR + ++ + P + E + + + +
Sbjct: 298 NELYECVKDLKVLGKKDFKMLLRWRKAAAEILGYGKEDEKTSIEEVPLDEEEQIEKELQQ 357
Query: 353 LNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSS---- 408
L E + L ++RKK E K K+ + T I + D +F+L +
Sbjct: 358 LQEKQRLNQKRERRKKNEMK--QKELTRMNMNMLTPNDIGIEAADVGRESVFNLKTAEKT 415
Query: 409 ------IKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDID-SDEERRKYDEQ 461
KGKK + +DSE+ RD+ H+ + +D++ +
Sbjct: 416 GILDQLAKGKKRM------------IFKDSENA---RDSDIHIEDGVKFTDKDDAGLADD 460
Query: 462 LEEVLDQAYENY 473
LE LD YENY
Sbjct: 461 LESQLDAMYENY 472
>gi|326481598|gb|EGE05608.1| rRNA methyltransferase Spb1 [Trichophyton equinum CBS 127.97]
Length = 791
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 146/301 (48%), Positives = 200/301 (66%), Gaps = 11/301 (3%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+YRLAKE GYR+RA++KL+QL+ K+ FL S +LDLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYRLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
SL++G+DL PI PI ++ + DIT +CRA +++ + D VLHDG+PNVG
Sbjct: 68 SQSLIVGVDLSPIKPIPKVITFQSDITTDKCRATIRQHFKTWKA---DTVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A SQ LV+ S+KLAT+FL P G+FVTKVFRS+DY+ +L+ KQLF VE KP
Sbjct: 125 AWVQDAFSQAELVLQSLKLATEFLVPGGSFVTKVFRSKDYNPLLWVFKQLFTTVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ + +KAP IDP+ LD K++F P V K+KR RDGY
Sbjct: 185 SSRNVSAEIFVVCLGFKAPKHIDPKFLDPKHVFAELQDPNPNNEAKVFNPEKKKRKRDGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+ D T K AT+FI + +P+ ILGS +TF GD A + ++ TT E++ +
Sbjct: 245 EENDWTQHKELPATEFINTTDPISILGSYNKLTFTQSPGGDLALATLQRLPETTNEIR-M 303
Query: 299 C 299
C
Sbjct: 304 C 304
>gi|355754285|gb|EHH58250.1| hypothetical protein EGM_08054 [Macaca fascicularis]
Length = 844
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 201/583 (34%), Positives = 312/583 (53%), Gaps = 86/583 (14%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
GKV GK R DK+Y LAKE GYRSR+++KL+QL+ +F FL+ + A+LDLCAAPGGW+QVA
Sbjct: 5 GKV-GKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAA 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ +PV SL++G+DLVPI P+ V+L++DIT CR ++K ++ V D+VL+DG+P
Sbjct: 64 KFMPVSSLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWKV---DVVLNDGAP 120
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG +W +A SQ L + +++LA FLA G F+TKVFRS+DY +L+ +QLF +V+
Sbjct: 121 NVGASWVHDAYSQAHLTLMALRLACDFLARGGCFITKVFRSRDYQPLLWIFQQLFRRVQA 180
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHR 240
KP ASR SAEI+++ + AP K+D + D K+ F + V+ + V +++ TK+K
Sbjct: 181 TKPQASRHESAEIFVVCQGFLAPDKVDSKFFDPKFAFKEVEVQAKTVTELV--TKKKPKA 238
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
+GY +GD TL + TDF+ + NP++ L + I D + H TTE+++ C
Sbjct: 239 EGYAEGDLTLYHRTSVTDFLRAANPVDFLSKASEIMVDD---EELAQHPATTEDIRVCCQ 295
Query: 301 DLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPA---------------------SASAP 339
D+RVLG+++ + LL WR ++++ + K A P
Sbjct: 296 DIRVLGRKELRLLLNWRTKLRRYVAKKLKEQAKALDISLSSGEEDEGDEEDSTAGITKQP 355
Query: 340 TEGENEEDADNRVLNEMEELKYA----------MDQRKKREKKLLAKKRAKDKARKATGM 389
++ E EE+ N+ L EM+ + A +QRK+RE+ L G+
Sbjct: 356 SKEEEEEEQLNQTLAEMKAQEVAELKRKKKKLLREQRKQRERVELKM--------DLPGI 407
Query: 390 QIDVMQDDYTDHELFSLSSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDI 449
I D + +FSL +I+G + L V D +AA+ + P D SD+
Sbjct: 408 SI----ADEGETGMFSLRTIRGHQLLEEVTQGD---MSAADTFLSDLPRDDI---YVSDV 457
Query: 450 DSDEERRKYDEQLEEVLDQAYENYVAKRGGSTMQ-RKRAKKAYAQEDQLSEGDEDEDTMH 508
+ D + D L+ E RG ++ +KR +
Sbjct: 458 EDDGDDTSADSDLDP------EELAGVRGHQDLRDQKRVR-------------------F 492
Query: 509 TSYDSDKDQGDLDANPLMVPLDDGIRPTQEEITNKWFSQEIFA 551
T + DK++ + + NPL+VPL++ QEE N WFS+ F
Sbjct: 493 TEVEDDKEEEEEEENPLLVPLEEKA-ILQEEQANLWFSKGSFV 534
>gi|410981500|ref|XP_003997106.1| PREDICTED: pre-rRNA processing protein FTSJ3 [Felis catus]
Length = 834
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 144/322 (44%), Positives = 218/322 (67%), Gaps = 10/322 (3%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
GKV GK R DK+Y LAKE GYRSR+++KL+QL+ +F FL+ + A+LDLCAAPGGW+QVA
Sbjct: 5 GKV-GKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAA 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ +PV SL++G+DLVPI P+ V+L++DIT CR +KK ++ V D+VL+DG+P
Sbjct: 64 KFMPVSSLIVGVDLVPIKPLPNVVTLQEDITTERCRQALKKELKTWKV---DVVLNDGAP 120
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG +W +A SQ L + +++LA FLA G F+TKVFRS+DY +L+ +QLF +V+
Sbjct: 121 NVGASWVHDAYSQAHLTLMALRLACDFLARGGCFITKVFRSRDYQPLLWIFQQLFRRVQA 180
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHR 240
KP ASR SAEI+++ + AP K+D + D K+ F + V+ + V +++ TK+K
Sbjct: 181 TKPQASRHESAEIFVVCQGFLAPDKVDSKFFDPKFAFKEIEVQAKTVTELV--TKKKPKA 238
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
+GY +GD TL + TDF+ + NP++ L + I D + H TTE+V+A C
Sbjct: 239 EGYAEGDLTLYHRTSVTDFLRAANPVDFLSKASEILLDD---EELAQHPATTEDVRACCQ 295
Query: 301 DLRVLGKQDFKHLLKWRMQIKK 322
D++VLG+++ + LL WR ++++
Sbjct: 296 DIKVLGRKELRSLLNWRTKLRR 317
>gi|365981183|ref|XP_003667425.1| hypothetical protein NDAI_0A00220 [Naumovozyma dairenensis CBS 421]
gi|343766191|emb|CCD22182.1| hypothetical protein NDAI_0A00220 [Naumovozyma dairenensis CBS 421]
Length = 841
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 178/526 (33%), Positives = 294/526 (55%), Gaps = 40/526 (7%)
Query: 1 MGKVKGKH---RLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGW 56
MGK + K+ RLD+YY LAKE GYR+R+S+K++Q++ KF FL S V+DLCAAPG W
Sbjct: 1 MGKTQKKNSKGRLDRYYYLAKEKGYRARSSFKIIQINEKFGHFLEKSKVVIDLCAAPGSW 60
Query: 57 MQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
QVA + PV SL++G+D+VP+ P+ ++ + DIT +CR++++ M+ D VL
Sbjct: 61 CQVASKLCPVNSLIIGVDIVPMKPMTNCITFQSDITTEDCRSKLRGYMKTWKA---DTVL 117
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
HDG+PNVG W Q+A +Q+ L + ++KLA + L GTFVTK+FRS+DY+ +++ +QLF
Sbjct: 118 HDGAPNVGLGWVQDAFTQSQLTLQALKLAAENLVVGGTFVTKIFRSKDYNKLIWVFQQLF 177
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVD--VLRGT 234
+KVE KP ASR+ SAEI+++ +KAP K+DPRLLD K +F+ + + ++ +
Sbjct: 178 DKVEATKPPASRNVSAEIFVVCKGFKAPKKLDPRLLDPKDVFEELPDGPQNMESKIYNPE 237
Query: 235 KQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFG--DPACSAIKDHELTT 292
K+ R R GYE+GD L +F+ + +P+ +LG T D + ++ + TT
Sbjct: 238 KKVRKRQGYEEGDNLLYHEKDIIEFVKTEDPITMLGETNKFTINKEDHEWNILRKMKQTT 297
Query: 293 EEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRV 352
+E +DL+VLGK+DFK +LKWR + ++ P P E + + + +
Sbjct: 298 KEFLLCIEDLKVLGKKDFKMILKWRKAARDLLGIDKENEKPEIEVTPLTEEEQIEKELQD 357
Query: 353 LNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSS---- 408
L E ++L ++RKK E K K+ + + T I + + LF+L +
Sbjct: 358 LQEKKKLSQKREKRKKNETK--QKELVRMQMNMLTPTDIGIEAANLGKESLFNLKTAEKT 415
Query: 409 ------IKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQL 462
KGK+ + + D+++ E DE R+ + V +D L
Sbjct: 416 GILSELAKGKRRML---FTDEELTKDDEIHIDENLVRERDDMVDAD------------DL 460
Query: 463 EEVLDQAYENYVAKRG--GSTMQRKRAKKAYAQEDQLSEGDEDEDT 506
E+ LD Y++Y ++R + + K+A+ +++ G++D++
Sbjct: 461 EKELDSMYQSYKSRRAERNANFRAKQARGGDNEDEWAGFGEKDQEN 506
>gi|156847842|ref|XP_001646804.1| hypothetical protein Kpol_2002p16 [Vanderwaltozyma polyspora DSM
70294]
gi|156117485|gb|EDO18946.1| hypothetical protein Kpol_2002p16 [Vanderwaltozyma polyspora DSM
70294]
Length = 844
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 187/511 (36%), Positives = 286/511 (55%), Gaps = 45/511 (8%)
Query: 1 MGKVKGKH---RLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGW 56
MGK + K+ RLDKYY LAKE GYR+R+S+K++Q++ K+ FL S V+DLCAAPG W
Sbjct: 1 MGKTQKKNSKGRLDKYYYLAKEKGYRARSSFKVIQINEKYGHFLEKSKVVIDLCAAPGSW 60
Query: 57 MQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
QVA + PV SL++G+D+VP+ P+ ++ + DIT +CR++++ M+ D VL
Sbjct: 61 CQVASKLCPVNSLIIGVDIVPMKPMPNVITFQSDITTEDCRSKLRGYMKTWKA---DTVL 117
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
HDG+PNVG W Q+A +Q+ L + ++KLA + L GTFVTK+FRS+DY+ +++ +QLF
Sbjct: 118 HDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLVVGGTFVTKIFRSKDYNKLIWVFQQLF 177
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVE-PRKVVDVLRGTK 235
+KVE KP ASR+ SAEI+++ +KAP ++DPRLLD K +F+ + P+ + + +
Sbjct: 178 DKVEATKPPASRNVSAEIFVVCKNFKAPKRLDPRLLDPKEVFEELPDGPQNMESKIYNPE 237
Query: 236 QK-RHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFG--DPACSAIKDHELTT 292
+K R R GYE+GD L + +F+ + +P+ +LG + D IK + TT
Sbjct: 238 KKVRKRQGYEEGDHLLYHETPIMEFVKTEDPITMLGEMNKFIIDKEDHEWKIIKKLKQTT 297
Query: 293 EEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRV 352
E +DL+VLGK+DFK +L+WR ++ + A P NEE+ +
Sbjct: 298 PEFLLCIEDLKVLGKKDFKMILRWRKASRELLDLDKDEEKEAIDVTPL---NEEEQIEKE 354
Query: 353 LNEMEE---LKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSS- 408
LN+M+E LK ++RKK E K K+ + + T I + + LF+L S
Sbjct: 355 LNDMQEKQRLKQKREKRKKNETK--QKEITRMQMNMLTPTDIGIEAAELGRESLFNLKSA 412
Query: 409 ---------IKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYD 459
KGKK + +EDE +RD H+ I D+
Sbjct: 413 EKTGILDKLAKGKKRMIF--------------TEDEL-SRDNDIHIDEKIIKDKNIADEA 457
Query: 460 EQLEEVLDQAYENYVAKRGGSTMQRKRAKKA 490
+ LE LD Y+ Y +R G+ + RAK+A
Sbjct: 458 DDLEAELDAMYDEY-KERKGARDAKFRAKQA 487
>gi|332848815|ref|XP_003315725.1| PREDICTED: pre-rRNA processing protein FTSJ3 isoform 1 [Pan
troglodytes]
Length = 847
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 142/322 (44%), Positives = 218/322 (67%), Gaps = 10/322 (3%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
GKV GK R DK+Y LAKE GYRSR+++KL+QL+ +F FL+ + A+LDLCAAPGGW+QVA
Sbjct: 5 GKV-GKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAA 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ +PV SL++G+DLVPI P+ V+L++DIT CR ++K ++ V D+VL+DG+P
Sbjct: 64 KFMPVSSLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWKV---DVVLNDGAP 120
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG +W +A SQ L + +++LA FLA G+F+TKVFRS+DY +L+ +QLF +V+
Sbjct: 121 NVGASWVHDAYSQAHLTLMALRLACDFLARGGSFITKVFRSRDYQPLLWIFQQLFRRVQA 180
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHR 240
KP ASR SAEI+++ + AP K+D + D K+ F + V+ + V +++ TK+K
Sbjct: 181 TKPQASRHESAEIFVVCQGFLAPDKVDSKFFDPKFAFKEVEVQAKTVTELV--TKKKPKA 238
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
+GY +GD TL + TDF+ + NP++ L + I D + H TTE+++ C
Sbjct: 239 EGYAEGDLTLYHRTSVTDFLRAANPVDFLSKASEIMVDD---EELAQHPATTEDIRVCCQ 295
Query: 301 DLRVLGKQDFKHLLKWRMQIKK 322
D+RVLG+++ + LL WR ++++
Sbjct: 296 DIRVLGRKELRSLLNWRTKLRR 317
>gi|426347139|ref|XP_004041216.1| PREDICTED: pre-rRNA processing protein FTSJ3 [Gorilla gorilla
gorilla]
Length = 847
Score = 296 bits (759), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 142/322 (44%), Positives = 218/322 (67%), Gaps = 10/322 (3%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
GKV GK R DK+Y LAKE GYRSR+++KL+QL+ +F FL+ + A+LDLCAAPGGW+QVA
Sbjct: 5 GKV-GKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAA 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ +PV SL++G+DLVPI P+ V+L++DIT CR ++K ++ V D+VL+DG+P
Sbjct: 64 KFMPVSSLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWKV---DVVLNDGAP 120
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG +W +A SQ L + +++LA FLA G+F+TKVFRS+DY +L+ +QLF +V+
Sbjct: 121 NVGASWVHDAYSQAHLTLMALRLACDFLARGGSFITKVFRSRDYQPLLWIFQQLFRRVQA 180
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHR 240
KP ASR SAEI+++ + AP K+D + D K+ F + V+ + V +++ TK+K
Sbjct: 181 TKPQASRHESAEIFVVCQGFLAPDKVDSKFFDPKFAFKEVEVQAKTVTELV--TKKKPKA 238
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
+GY +GD TL + TDF+ + NP++ L + I D + H TTE+++ C
Sbjct: 239 EGYAEGDLTLYHRTSVTDFLRAANPVDFLSKASEIMVDD---EELAQHPATTEDIRVCCQ 295
Query: 301 DLRVLGKQDFKHLLKWRMQIKK 322
D+RVLG+++ + LL WR ++++
Sbjct: 296 DIRVLGRKELRSLLNWRTKLRR 317
>gi|444726995|gb|ELW67505.1| Putative rRNA methyltransferase 3 [Tupaia chinensis]
Length = 833
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 141/322 (43%), Positives = 219/322 (68%), Gaps = 10/322 (3%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
GKV GK R DK+Y LAKE GYRSR+++KL+QL+ +F FL+ + A+LDLCAAPGGW+QVA
Sbjct: 5 GKV-GKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAA 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ +PV SL++G+DLVPI P+ V+L++DIT CR ++K ++ V D+VL+DG+P
Sbjct: 64 KFMPVSSLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWKV---DVVLNDGAP 120
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG +W +A SQ L + +++LA FLA G F+TKVFRS+DY +L+ +QLF +V+
Sbjct: 121 NVGASWVHDAYSQAHLTLMALRLACDFLARGGCFITKVFRSRDYQPLLWIFQQLFHRVQA 180
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHR 240
KP ASR SAEI+++ + AP K+D + D K+ F + V+ + V +++ TK+K
Sbjct: 181 TKPQASRHESAEIFVVCQGFLAPDKVDSKFFDPKFAFKEVEVQAKTVTELV--TKKKPKA 238
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
+GY +GD TL + TDF+ + NP++ L + I+ + + H TTE+++A C
Sbjct: 239 EGYAEGDLTLYHRTSVTDFLRATNPVDFLSKASEISLDE---EELAQHPATTEDIRACCQ 295
Query: 301 DLRVLGKQDFKHLLKWRMQIKK 322
D++VLG+++ + LL WR ++++
Sbjct: 296 DIKVLGRKELRSLLNWRTKLRR 317
>gi|410256152|gb|JAA16043.1| FtsJ homolog 3 [Pan troglodytes]
gi|410307214|gb|JAA32207.1| FtsJ homolog 3 [Pan troglodytes]
gi|410349587|gb|JAA41397.1| FtsJ homolog 3 [Pan troglodytes]
Length = 847
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 142/322 (44%), Positives = 218/322 (67%), Gaps = 10/322 (3%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
GKV GK R DK+Y LAKE GYRSR+++KL+QL+ +F FL+ + A+LDLCAAPGGW+QVA
Sbjct: 5 GKV-GKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAA 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ +PV SL++G+DLVPI P+ V+L++DIT CR ++K ++ V D+VL+DG+P
Sbjct: 64 KFMPVSSLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWKV---DVVLNDGAP 120
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG +W +A SQ L + +++LA FLA G+F+TKVFRS+DY +L+ +QLF +V+
Sbjct: 121 NVGASWVHDAYSQAHLTLMALRLACDFLARGGSFITKVFRSRDYQPLLWIFQQLFRRVQA 180
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHR 240
KP ASR SAEI+++ + AP K+D + D K+ F + V+ + V +++ TK+K
Sbjct: 181 TKPQASRHESAEIFVVCQGFLAPDKVDSKFFDPKFAFKEVEVQAKTVTELV--TKKKPKA 238
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
+GY +GD TL + TDF+ + NP++ L + I D + H TTE+++ C
Sbjct: 239 EGYAEGDLTLYHRTSVTDFLRAANPVDFLSKASEIMVDD---EELAQHPATTEDIRVCCQ 295
Query: 301 DLRVLGKQDFKHLLKWRMQIKK 322
D+RVLG+++ + LL WR ++++
Sbjct: 296 DIRVLGRKELRSLLNWRTKLRR 317
>gi|406603079|emb|CCH45414.1| hypothetical protein BN7_4996 [Wickerhamomyces ciferrii]
Length = 834
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 186/541 (34%), Positives = 296/541 (54%), Gaps = 62/541 (11%)
Query: 3 KVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGWMQVAV 61
K K RLD+YY LAKE GYR+R+S+K++Q++ K+ FL S V+DLCAAPG W QVA
Sbjct: 8 KKNAKGRLDRYYYLAKEKGYRARSSFKIIQINEKYGHFLERSKVVIDLCAAPGSWCQVAS 67
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ PV S+++G+D+VPI P+ ++ + DIT +CR+R++ M+ D VLHDG+P
Sbjct: 68 KLCPVNSMIIGVDIVPIKPMPNCITFQSDITTEDCRSRLRGYMKTWKA---DTVLHDGAP 124
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG W Q+A +Q+ L + ++KLA + L+ GTFVTK+FRS+DY+ +++ +QLFEKVE
Sbjct: 125 NVGLGWVQDAFTQSQLTLQALKLAVENLSIGGTFVTKIFRSKDYNKLMWVFQQLFEKVEA 184
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVE--PRKVVDVLRGTKQKRH 239
KP ASR+ SAEI+++ +KAP K+DPRLLD K +F+ + V +KR
Sbjct: 185 TKPPASRNVSAEIFVVCKNFKAPKKLDPRLLDPKEVFEELADGPANNEAKVFNPEVKKRK 244
Query: 240 RDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFG--DPACSAIKDHELTTEEVKA 297
R+GYE+GD K +FI NP++ILG ++ DP +K + T+ E+
Sbjct: 245 REGYEEGDYLQFKSLPIMEFIKDENPIDILGETSTFQIDDEDPDWKLVKKLKQTSGELLE 304
Query: 298 LCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEME 357
DL+VLGK+DF+ +L+WR +I + +K P + E+E+ + E++
Sbjct: 305 CFKDLKVLGKKDFRMILRWR-KIARKLLDLDKDDEPVTVEVEPLNEDEQ-----IDKELD 358
Query: 358 ELKYAMDQRKKREKKLLAKKRAKDKARKATGM----QIDVMQDDYTDHELFSLSSI---- 409
+++ ++KREK+ + + K+ R M I + LF+L +
Sbjct: 359 QVRSKQITKQKREKRKQNEMKQKEIVRMQMNMLTPKDIGIEAASLGADSLFNLKTAEKTG 418
Query: 410 ------KGKKDLAAVEYDDDDV---NAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDE 460
KGK+ + +D +++ N A S+DE+ + S+ + DE
Sbjct: 419 QLNDLSKGKRRMI---FDQNEIYQGNEFAFGSDDEK-------MIGSEDEVDE------- 461
Query: 461 QLEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDL 520
LE LD Y Y Q +R+++ +++ GDED+ + +D KD +
Sbjct: 462 -LEAQLDNMYAAY---------QERRSERDAKYRAKMARGDEDD----SKWDGIKDDQNS 507
Query: 521 D 521
D
Sbjct: 508 D 508
>gi|402900732|ref|XP_003913322.1| PREDICTED: putative rRNA methyltransferase 3 [Papio anubis]
Length = 844
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 200/583 (34%), Positives = 312/583 (53%), Gaps = 86/583 (14%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
GKV GK R DK+Y LAKE GYRSR+++KL+QL+ +F FL+ + A+LDLCAAPGGW+QVA
Sbjct: 5 GKV-GKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAA 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ +PV SL++G+DLVPI P+ V+L++DIT CR ++K ++ V D+VL+DG+P
Sbjct: 64 KFMPVSSLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWKV---DVVLNDGAP 120
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG +W +A SQ L + +++LA FLA G F+TKVFRS+DY +L+ +QLF +V+
Sbjct: 121 NVGASWVHDAYSQAHLTLMALRLACDFLARGGCFITKVFRSRDYQPLLWIFQQLFRRVQA 180
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHR 240
KP ASR SAEI+++ + AP K+D + D K+ F + ++ + V +++ TK+K
Sbjct: 181 TKPQASRHESAEIFVVCQGFLAPDKVDSKFFDPKFAFKEVELQAKTVTELV--TKKKPKA 238
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
+GY +GD TL + TDF+ + NP++ L + I D + H TTE+++ C
Sbjct: 239 EGYAEGDLTLYHRTSVTDFLRAANPVDFLSKASEIMVDD---EELAQHPATTEDIRVCCQ 295
Query: 301 DLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPA---------------------SASAP 339
D+RVLG+++ + LL WR ++++ + K A P
Sbjct: 296 DIRVLGRKELRLLLNWRTKLRRYVAKKLKEQAKALDISLSSGEEDEGDEEDSTAGITKQP 355
Query: 340 TEGENEEDADNRVLNEMEELKYA----------MDQRKKREKKLLAKKRAKDKARKATGM 389
++ E EE+ N+ L EM+ + A +QRK+RE+ L G+
Sbjct: 356 SKEEEEEEQLNQTLAEMKAQEVAELKRKKKKLLREQRKQRERVELKM--------DLPGV 407
Query: 390 QIDVMQDDYTDHELFSLSSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDI 449
I D + +FSL +I+G + L V D +AA+ + P D SD+
Sbjct: 408 SI----ADEGETGMFSLRTIRGHQLLEEVTQGD---MSAADTFLSDLPRDDI---YVSDV 457
Query: 450 DSDEERRKYDEQLEEVLDQAYENYVAKRGGSTMQ-RKRAKKAYAQEDQLSEGDEDEDTMH 508
+ D + D L+ E RG ++ +KR +
Sbjct: 458 EDDGDDTSADSDLDP------EELAGVRGHQDLRDQKRVR-------------------F 492
Query: 509 TSYDSDKDQGDLDANPLMVPLDDGIRPTQEEITNKWFSQEIFA 551
T + DK++ + + NPL+VPL++ QEE N WFS+ F
Sbjct: 493 TEVEDDKEEEEEEENPLLVPLEEKA-ILQEEQANLWFSKGSFV 534
>gi|417404920|gb|JAA49193.1| Putative sam-dependent rrna methyltransferase spb1 [Desmodus
rotundus]
Length = 840
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 201/581 (34%), Positives = 313/581 (53%), Gaps = 82/581 (14%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
GKV GK R DK+Y LAKE GYRSR+++KL+QL+ +F FL+ + A+LDLCAAPGGW+QVA
Sbjct: 5 GKV-GKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAA 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ +PV SL++G+DLVPI P+ V+L++DIT CR ++K ++ V D+VL+DG+P
Sbjct: 64 KFMPVSSLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWKV---DVVLNDGAP 120
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG +W +A SQ L + +++LA FLA G F+TKVFRS+DY +L+ +QLF V+
Sbjct: 121 NVGASWVHDAYSQAHLTLMALRLACDFLARGGYFITKVFRSRDYQPLLWIFQQLFRHVQA 180
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHR 240
KP ASR SAEI+++ + AP K+D + D K+ F + V+ + V +++ TK+K
Sbjct: 181 TKPQASRHESAEIFVVCQGFLAPDKVDSKFFDPKFAFKEVEVQAKTVTELV--TKKKPKA 238
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
+GY +GD TL + TDF+ + NP++ L + I + + H TTE++ C
Sbjct: 239 EGYAEGDLTLYHRTSVTDFLRAANPVDFLSKASEIVLDE---EELAQHPATTEDIWVCCQ 295
Query: 301 DLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPA-------------SASAPTEGENEED 347
D++VLG+++ + LL WR ++++ + K A T G +
Sbjct: 296 DIKVLGRKELRSLLNWRTKLRRYVAKKLKEQAKALDISLSSGEEEEGDEEESTAGNVRQI 355
Query: 348 AD-------NRVLNEMEELKYA----------MDQRKKREKKLLAKKRAKDKARKATGMQ 390
++ NR L EM+ + A +QRK+RE+ L G+
Sbjct: 356 SEEEEEEQLNRTLAEMKAQEVAELKRKKKKLLREQRKQRERVELKM--------DLPGVS 407
Query: 391 IDVMQDDYTDHELFSLSSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDID 450
I D + +FSL +I+G + L V D +AA+ + P D SD++
Sbjct: 408 I----ADEGETGMFSLRTIRGHQLLEEVTQGD---MSAADTFLSDLPRDDI---YVSDVE 457
Query: 451 SDEERRKYDEQLEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTS 510
DEE L+ LD E RG +++ ++ +LS
Sbjct: 458 DDEE-----ASLDSDLDP--EELAGVRGHQSLKDQK---------RLS-------VQFAE 494
Query: 511 YDSDKDQGDLDANPLMVPLDDGIRPTQEEITNKWFSQEIFA 551
+ DK++ D + NPL+VPL++ QEE N WFS++ F+
Sbjct: 495 AEDDKEEEDEEENPLLVPLEEKA-VLQEEQANLWFSKDGFS 534
>gi|410209886|gb|JAA02162.1| FtsJ homolog 3 [Pan troglodytes]
gi|410256150|gb|JAA16042.1| FtsJ homolog 3 [Pan troglodytes]
Length = 847
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 142/322 (44%), Positives = 218/322 (67%), Gaps = 10/322 (3%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
GKV GK R DK+Y LAKE GYRSR+++KL+QL+ +F FL+ + A+LDLCAAPGGW+QVA
Sbjct: 5 GKV-GKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAA 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ +PV SL++G+DLVPI P+ V+L++DIT CR ++K ++ V D+VL+DG+P
Sbjct: 64 KFMPVSSLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWKV---DVVLNDGAP 120
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG +W +A SQ L + +++LA FLA G+F+TKVFRS+DY +L+ +QLF +V+
Sbjct: 121 NVGASWVHDAYSQAHLTLMALRLACDFLARGGSFITKVFRSRDYQPLLWIFQQLFRRVQA 180
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHR 240
KP ASR SAEI+++ + AP K+D + D K+ F + V+ + V +++ TK+K
Sbjct: 181 TKPQASRHESAEIFVVCQGFLAPDKVDSKFFDPKFAFKEVEVQAKTVTELV--TKKKPKA 238
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
+GY +GD TL + TDF+ + NP++ L + I D + H TTE+++ C
Sbjct: 239 EGYAEGDLTLYHRTSVTDFLRAANPVDFLSKASEIMVDD---EELAQHPATTEDIRVCCQ 295
Query: 301 DLRVLGKQDFKHLLKWRMQIKK 322
D+RVLG+++ + LL WR ++++
Sbjct: 296 DIRVLGRKELRSLLNWRTKLRR 317
>gi|397480218|ref|XP_003811384.1| PREDICTED: putative rRNA methyltransferase 3 [Pan paniscus]
Length = 846
Score = 296 bits (757), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 141/322 (43%), Positives = 218/322 (67%), Gaps = 10/322 (3%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
GKV GK R DK+Y LAKE GYRSR+++KL+QL+ +F FL+ + A+LDLCAAPGGW+QVA
Sbjct: 5 GKV-GKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAA 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ +PV SL++G+DLVPI P+ V+L++DIT CR ++K ++ V D+VL+DG+P
Sbjct: 64 KFMPVSSLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWKV---DVVLNDGAP 120
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG +W +A SQ L + +++LA FLA G+F+TKVFRS+DY +L+ +QLF +V+
Sbjct: 121 NVGASWVHDAYSQAHLTLMALRLACDFLARGGSFITKVFRSRDYQPLLWIFQQLFRRVQA 180
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHR 240
KP ASR SAEI+++ + AP K+D + D K+ F + V+ + + +++ TK+K
Sbjct: 181 TKPQASRHESAEIFVVCQGFLAPDKVDSKFFDPKFAFKEVEVQAKTITELV--TKKKPKA 238
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
+GY +GD TL + TDF+ + NP++ L + I D + H TTE+++ C
Sbjct: 239 EGYAEGDLTLYHRTSVTDFLRAANPVDFLSKASEIMVDD---EELAQHPATTEDIRVCCQ 295
Query: 301 DLRVLGKQDFKHLLKWRMQIKK 322
D+RVLG+++ + LL WR ++++
Sbjct: 296 DIRVLGRKELRSLLNWRTKLRR 317
>gi|355689325|gb|AER98796.1| FtsJ-like protein 3 [Mustela putorius furo]
Length = 436
Score = 295 bits (756), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 169/450 (37%), Positives = 263/450 (58%), Gaps = 54/450 (12%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
GKV GK R DK+Y LAKE GYRSR+++KL+QL+ +F FL+ + A+LDLCAAPGGW+QVA
Sbjct: 5 GKV-GKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAA 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ +PV SL++G+DLVPI P+ V+L++DIT CR ++K ++ V D+VL+DG+P
Sbjct: 64 KFMPVSSLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWKV---DVVLNDGAP 120
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG +W +A SQ L + +++LA FLA G F+TKVFRS+DY +L+ +QLF +V+
Sbjct: 121 NVGASWVHDAYSQAHLTLMALRLACDFLARGGCFITKVFRSRDYQPLLWIFQQLFRRVQA 180
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHR 240
KP ASR SAEI+++ + AP K+D + D K+ F + V+ + V +++ TK+K
Sbjct: 181 TKPQASRHESAEIFVVCQGFLAPDKVDSKFFDPKFAFKEVEVQAKTVTELV--TKKKPKA 238
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
+GY +GD TL + TDF+ + NP++ L + I+ D + H TTE+++A C
Sbjct: 239 EGYAEGDLTLYHRTSVTDFLRAANPVDFLSKASEISLDD---EELAQHPATTEDIQACCQ 295
Query: 301 DLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPA----------------------SASA 338
D++VLG+++ + LL WR ++++ + K A +
Sbjct: 296 DIKVLGRKELRSLLNWRTKLRRYMAKKLKEQAKALDISLSSGEEEEEEGEEESKAGTGQQ 355
Query: 339 PTEGENEEDADNRVLNEMEELKYA----------MDQRKKREKKLLAKKRAKDKARKATG 388
++ + EE+ NR L EM+ + A +QRK+RE+ L G
Sbjct: 356 LSKEDEEEEQLNRTLAEMKAQEVADLKRKKKKLLREQRKQRERVELKM--------DLPG 407
Query: 389 MQIDVMQDDYTDHELFSLSSIKGKKDLAAV 418
+ I D + +FSL +I+G + L AV
Sbjct: 408 VSI----ADEGETGMFSLRTIRGHQLLEAV 433
>gi|403303760|ref|XP_003942491.1| PREDICTED: putative rRNA methyltransferase 3 [Saimiri boliviensis
boliviensis]
Length = 839
Score = 295 bits (756), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 142/322 (44%), Positives = 217/322 (67%), Gaps = 10/322 (3%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
GKV GK R DK+Y LAKE GYRSR+++KL+QL+ +F FL+ + A+LDLCAAPGGW+QVA
Sbjct: 5 GKV-GKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAA 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ +PV SL++G+DLVPI P+ V+L++DIT CR ++K ++ V D+VL+DG+P
Sbjct: 64 KFMPVSSLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWKV---DIVLNDGAP 120
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG +W +A SQ L + +++LA FLA G F+TKVFRS+DY +L+ +QLF +V+
Sbjct: 121 NVGASWVHDAYSQAHLTLMALRLACDFLARGGCFITKVFRSRDYQPLLWIFQQLFRRVQA 180
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHR 240
KP ASR SAEI+++ + AP K+D + D K+ F + V+ + V +++ TK+K
Sbjct: 181 TKPQASRHESAEIFVVCQGFLAPDKVDSKFFDPKFAFKEVEVQAKTVTELV--TKKKPKA 238
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
+GY +GD TL + TDF+ + NP++ L + I D + H TTE+++ C
Sbjct: 239 EGYAEGDLTLYLRTSVTDFLRAANPVDFLSKASEIMVDD---EELAQHPATTEDIRVCCQ 295
Query: 301 DLRVLGKQDFKHLLKWRMQIKK 322
D+RVLG+++ + LL WR ++++
Sbjct: 296 DIRVLGRKELRSLLNWRTKLRR 317
>gi|384500180|gb|EIE90671.1| hypothetical protein RO3G_15382 [Rhizopus delemar RA 99-880]
Length = 826
Score = 295 bits (755), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 189/522 (36%), Positives = 284/522 (54%), Gaps = 64/522 (12%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
K RLDKYY LAKE GYR+R+++KL+QL+ K++FL S A++DLCAAPGG +
Sbjct: 11 KGRLDKYYHLAKEQGYRARSAFKLIQLNKKYNFLEKSRALIDLCAAPGGCI--------- 61
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
+ + ++V F +VLHDG+PNVG A
Sbjct: 62 ----------------------------DTKTFFEQVWIFAQSNLFQVVLHDGAPNVGRA 93
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
WA +A SQ+ LV+ S+KLAT+FL+ GTFVTKVFRS+DY+ +++ +QLF KVE KP +
Sbjct: 94 WAHDAFSQSELVLVSLKLATEFLSKGGTFVTKVFRSKDYNKLIWVFQQLFRKVEATKPPS 153
Query: 187 SRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGYE 244
SR+ SAEI+++ + AP KIDPR+LD K +F G+ EP+K+ DV R K+KRHRDGYE
Sbjct: 154 SRNVSAEIFVVCRDFIAPKKIDPRMLDPKAVFSDVGAEEPKKLADVFRPEKKKRHRDGYE 213
Query: 245 DGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLRV 304
DGD TL K +FI +++P+ LGS TF + ++TTE++K C+DL+V
Sbjct: 214 DGDYTLHKTLDVMEFIRADDPIVTLGSYNQFTFTSDESRELLKRDITTEDIKINCEDLKV 273
Query: 305 LGKQDFKHLLKWRMQIKKAF----SSAEKATVPASASAPTEGENEEDADNRVLNEMEELK 360
LG+ +FK LLKWR I+ EK V + E + N L + E K
Sbjct: 274 LGRGEFKALLKWRTTIRDELKMDKKKEEKIAVIEEEPMDEDEMLEAELSN--LTKEEAAK 331
Query: 361 YAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSIKGKKDLAAVEY 420
++RK EKK+ +R + T + +D + E+F++ I KKD + +
Sbjct: 332 RKREKRKANEKKMKLIQRMQLNMIVPTDIALD--DGGLGEDEVFNIKKI--KKDSSLEKL 387
Query: 421 DDDDVNAAAEDS----------EDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAY 470
+ D++ A + + R + + D+DS++E Y+ LE +D+ Y
Sbjct: 388 HNGDMSMADDLDEDDGPDDIKVDKNMKGRIAEMDMDEDLDSEDE---YERDLENQMDEDY 444
Query: 471 ENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYD 512
Y +R + RAK+A ++D+ S G +D+ T + + D
Sbjct: 445 SRYKQRRAERD-AKFRAKQAREEQDEWS-GFDDKKTQNKNRD 484
>gi|90082607|dbj|BAE90485.1| unnamed protein product [Macaca fascicularis]
Length = 540
Score = 295 bits (755), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 201/579 (34%), Positives = 310/579 (53%), Gaps = 86/579 (14%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
GKV GK R DK+Y LAKE GYRSR+++KL+QL+ +F FL+ + A+LDLCAAPGGW+QVA
Sbjct: 5 GKV-GKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAA 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ +PV SL++G+DLVPI P+ V+L++DIT CR ++K ++ V D+VL DG+P
Sbjct: 64 KFMPVSSLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWKV---DVVLDDGAP 120
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG +W +A SQ L + +++LA FLA G F+TKVFRS+DY +L+ +QLF +V+
Sbjct: 121 NVGASWVHDAYSQAHLTLMALRLACDFLARGGCFITKVFRSRDYQPLLWIFQQLFRRVQA 180
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHR 240
KP ASR SAEI+++ + AP K+D + D K+ F + V+ + V +++ TK+K
Sbjct: 181 TKPQASRHESAEIFVVCQGFLAPDKVDSKFFDPKFAFKEVEVQAKTVTELV--TKKKPKA 238
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
+GY +GD TL + TDF+ + NP++ L + I D + H TTE+++ C
Sbjct: 239 EGYAEGDLTLYHRTSVTDFLRAANPVDFLSKASEIMVDD---EELAQHPATTEDIRVCCQ 295
Query: 301 DLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPA---------------------SASAP 339
D+RVLG+++ + LL WR ++++ + K A P
Sbjct: 296 DIRVLGRKELRLLLNWRTKLRRYVAKKLKEQAKALDISLSSGEEDEGDEEDSTAGITKQP 355
Query: 340 TEGENEEDADNRVLNEMEELKYA----------MDQRKKREKKLLAKKRAKDKARKATGM 389
++ E EE+ N+ L EM+ + A +QRK+RE+ L G+
Sbjct: 356 SKEEEEEEQLNQTLAEMKAQEVAELKRKKKKLLREQRKQRERVELKM--------DLPGI 407
Query: 390 QIDVMQDDYTDHELFSLSSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDI 449
I D + +FSL +I+G + L V D +AA+ + P D SD+
Sbjct: 408 SI----ADEGETGMFSLRTIRGHQLLEEVTQGD---MSAADTFLSDLPRDDI---YVSDV 457
Query: 450 DSDEERRKYDEQLEEVLDQAYENYVAKRGGSTMQ-RKRAKKAYAQEDQLSEGDEDEDTMH 508
+ D E D L+ E RG ++ +KR +
Sbjct: 458 EDDGEDTSADSDLDP------EELAGVRGHQDLRDQKRVR-------------------F 492
Query: 509 TSYDSDKDQGDLDANPLMVPLDDGIRPTQEEITNKWFSQ 547
T + DK++ + + NPL+VPL++ QEE N WFS+
Sbjct: 493 TEVEDDKEEEEEEENPLLVPLEEKA-ILQEEQANLWFSK 530
>gi|390354975|ref|XP_787153.2| PREDICTED: putative rRNA methyltransferase 3-like
[Strongylocentrotus purpuratus]
Length = 914
Score = 295 bits (755), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 166/444 (37%), Positives = 258/444 (58%), Gaps = 20/444 (4%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R D+YY LAKE GYRSR+++KL+QL+ KFSFL+ S +DLCAAPGGW+QVA + +P
Sbjct: 8 GKQRKDRYYHLAKETGYRSRSAFKLIQLNRKFSFLQESRVCIDLCAAPGGWLQVASRNMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
+ S+++G+DL PI PI VS DIT +CR +++K M+ D VLHDG+PNVG
Sbjct: 68 ISSMIIGVDLFPIKPIPNVVSFTCDITTTKCRMQLRKEMKTWKA---DCVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
+W +A +Q L + ++KLA +FL G F+TKVFRS+DY +L+ Q+F KV V KP
Sbjct: 125 SWVLDAFTQAQLTLHALKLAVEFLNKGGWFITKVFRSKDYQPLLWVFHQMFRKVHVTKPQ 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ---GSVEPRKVVDVLRGTK--QKRHR 240
ASR+ SAEI+++ + +P KIDP+ D KY+F+ G ++ +LR +K
Sbjct: 185 ASRNESAEIFVVCQGFISPDKIDPKFFDPKYIFKEVVGEETTKQKATILRDPSKVKKAKA 244
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
+GY +GD TL + ++ S + LE+L + + + F D +I H LTT+E+K C
Sbjct: 245 EGYAEGDYTLYHPVQVSKYMASEDALELLNNCSELVFDD---DSIASHHLTTKEIKICCR 301
Query: 301 DLRVLGKQDFKHLLKWRMQIKKAFSSAEKATV-PASASAPTEGENEEDADNRVLNEMEEL 359
D++VLG+++ + LL W + K + E+ T + EG++E+ +++
Sbjct: 302 DIKVLGRREVRDLLNWHKKYNKEKAQLEEETANQVKEKSKLEGKDEDGESEEDEDDVVAK 361
Query: 360 KYAMDQRKKR-------EKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSIKGK 412
+ A + ++R + L +K+ +++ K+ +Q + M DD LF L +IK
Sbjct: 362 QLATIKEEERLAGKRKKKDALKKRKKLRERLHKSKELQSN-MGDDTQGESLFGLVNIKNA 420
Query: 413 KDLAAVEYDDDDVNAAAEDSEDER 436
+ L V DD A D E+
Sbjct: 421 QQLQKVNTDDAGTVANDNDGPPEK 444
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 90/180 (50%), Gaps = 42/180 (23%)
Query: 638 ILACAKKMLRKKQREQILDDAYNRYMF-DDDGLPDWFLEEERRHRQAIRPVTKEEIAAMK 696
++A +KK R QI++ AY+RY + D D +PDW +E RH + PVTKE +A +
Sbjct: 737 MMATSKKATR-----QIIEHAYHRYSYGDQDRIPDWLRSDETRHCRRNTPVTKELVAEYR 791
Query: 697 AQFKEIDARPAKK-------------VAEAKARKKRVAMRKLEKVRKKANVISDQADISD 743
A+ +E++ARP KK V K+RKKA VISD D S+
Sbjct: 792 ARLREVNARPIKKVAEAKARKKKKQIVKLE-------------KLRKKAEVISDLVDTSE 838
Query: 744 RSKRKQIEQLYKSAVPKRPKK---EYVVAKKGVQVR------AGKGKV-LVDPRMKKDSR 793
K Q++ LYK + KK +YVV +K + KG +VDPRMKKD R
Sbjct: 839 TEKMSQMKNLYKKMKIGQTKKKDVKYVVTRKHQSTKRVSRPSGVKGPFKVVDPRMKKDMR 898
>gi|242010550|ref|XP_002426028.1| ribosomal RNA methyltransferase, putative [Pediculus humanus
corporis]
gi|212510038|gb|EEB13290.1| ribosomal RNA methyltransferase, putative [Pediculus humanus
corporis]
Length = 839
Score = 295 bits (754), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 142/313 (45%), Positives = 208/313 (66%), Gaps = 8/313 (2%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R D+YY+LAKE G+RSRA++KL+QL+ KF FL SS ++DLCAAPGGWMQVA Q +P
Sbjct: 8 GKQRKDRYYKLAKETGFRSRAAFKLLQLNRKFGFLESSKVLIDLCAAPGGWMQVAKQNMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V S+++G+DL PI PI G +SL +DIT +C++ + K ++ D+VLHDG+PNVG
Sbjct: 68 VSSVIVGVDLFPIKPIPGCISLVEDITTSKCKSSLTKALQTWKA---DVVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
W +A Q L + ++KL T+FL G F+TKVFRS DY+S+L+ KQLF+KV+ KP
Sbjct: 125 NWIHDAYQQVCLTLSALKLGTEFLREGGWFITKVFRSSDYNSLLWVFKQLFKKVQATKPQ 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHR-DGY 243
ASRS SAEI++ + AP KIDP+ +Y+F + ++ +++ KQK+ + +GY
Sbjct: 185 ASRSESAEIFVACKHFFAPDKIDPKFFQPQYVFKELDLKSPATLNIFNPRKQKKAKPEGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLR 303
E+GD TL T+F+ S N +E+L ++I F D I +H TT+E+ D++
Sbjct: 245 EEGDYTLHHTINVTEFLKSENAIEVLQRASTIVFDD---ETILNHPKTTKELVECFKDIK 301
Query: 304 VLGKQDFKHLLKW 316
VL ++D + +L W
Sbjct: 302 VLNRKDVRLILTW 314
>gi|354542880|emb|CCE39598.1| hypothetical protein CPAR2_600110 [Candida parapsilosis]
Length = 813
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 185/517 (35%), Positives = 291/517 (56%), Gaps = 39/517 (7%)
Query: 1 MGKVKGKH---RLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGW 56
MGKV+ K+ RLD+YY LAKE GYR+R+S+K++Q++ KF FL S V+DLCAAPG W
Sbjct: 1 MGKVQKKNSKGRLDRYYYLAKEKGYRARSSFKIIQINEKFGHFLEKSKVVIDLCAAPGSW 60
Query: 57 MQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
QVA Q PV SL++G+D+VPI P+ ++ + DIT +CR++++ M+ D VL
Sbjct: 61 CQVASQLCPVNSLIIGVDIVPIKPLPNCITFQSDITTEDCRSKLRGHMKTWKA---DTVL 117
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
HDG+PNVG W Q+A +Q+ L + ++KLA + L GTFVTK+FRS+DY+++++ +QLF
Sbjct: 118 HDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLIVGGTFVTKIFRSRDYNNLMWVFQQLF 177
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVD----VLR 232
+KVE KP +SR+ SAEI+++ +KAP K+DPRLLD + +F+ + +K V+ V
Sbjct: 178 DKVEATKPPSSRNVSAEIFVVCRGFKAPKKLDPRLLDPREVFE-ELNGKKSVNNEEKVFN 236
Query: 233 GTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF--GDPACSAIKDHEL 290
K++R R GYE+GD TL FI ++P+ LG + D IK +
Sbjct: 237 PEKKRRQRQGYEEGDYTLFHTMPIMQFIKEDDPINQLGQLNKFDIDDNDHEWKIIKKLKS 296
Query: 291 TTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADN 350
+EE++ DL++LGK++FKH+L++R Q + ++ E + D +
Sbjct: 297 YSEELRECFKDLKILGKKEFKHILRFRKQARDLLGIDKEEEKAEIEVEELTEEQKIDQE- 355
Query: 351 RVLNEM-EELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSI 409
LN+M E+ K + KK +L K+ +++ + T M I + LF+L +
Sbjct: 356 --LNQMLEKQKQKAKRAKKTANELKQKEIVRNQMQMVTDMNIGIDAAQIGADSLFNLKTA 413
Query: 410 KGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDE--QLEEVLD 467
+ L+ + + + ED RDT+ H ++E DE +LE LD
Sbjct: 414 EKSGPLSKLAAGKKAMVFSEEDCA-----RDTEIHY-----DEQEANSEDEIDELEAQLD 463
Query: 468 QAYENYVAKRGGSTMQRKRAKKAYAQEDQLSEGDEDE 504
YE Y Q +RA++ + +L+ G +DE
Sbjct: 464 DMYEQY---------QNRRAERDAKYKAKLARGGDDE 491
>gi|444314813|ref|XP_004178064.1| hypothetical protein TBLA_0A07550 [Tetrapisispora blattae CBS 6284]
gi|387511103|emb|CCH58545.1| hypothetical protein TBLA_0A07550 [Tetrapisispora blattae CBS 6284]
Length = 867
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 142/329 (43%), Positives = 216/329 (65%), Gaps = 19/329 (5%)
Query: 1 MGKVKGKH---RLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGW 56
MGK + K+ RLD+YY LAKE GYR+R+S+K++Q++ K+ FL S V+DLCAAPG W
Sbjct: 1 MGKTQKKNSKGRLDRYYYLAKEKGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSW 60
Query: 57 MQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
QVA + P+ SL++G+D+VP+ P+ ++ + DIT +CR++++ M+ D VL
Sbjct: 61 CQVASKLCPINSLIIGVDIVPMKPMPNVITFQSDITTEDCRSKLRGYMKTWKA---DTVL 117
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
HDG+PNVG WAQ+A +Q+ L + ++KLA + L GTF+TKVFRS+DY+ +++ +Q F
Sbjct: 118 HDGAPNVGLGWAQDAFTQSHLTLQALKLAVENLVVNGTFITKVFRSKDYNKLIWLFQQFF 177
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ------GSVEPRKVVDV 230
EKVE KP ASR+ SAEI+++ +KAP +IDPRLLD K +F+ ++E R +
Sbjct: 178 EKVEATKPPASRNVSAEIFVVCKGFKAPKRIDPRLLDPKEVFEELPDGPQNMESR----I 233
Query: 231 LRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF--GDPACSAIKDH 288
K+ R R GYE+GD L + +F+ + +P+ +LG + TF + +K
Sbjct: 234 YNPEKKVRKRQGYEEGDNLLYHETDILEFVKTEDPISMLGVMNKFTFDKNNTEWQILKKM 293
Query: 289 ELTTEEVKALCDDLRVLGKQDFKHLLKWR 317
+ TT+E + +DL+VLGK+DFK +LKWR
Sbjct: 294 KQTTKEFLSCIEDLKVLGKKDFKMILKWR 322
>gi|50550277|ref|XP_502611.1| YALI0D09251p [Yarrowia lipolytica]
gi|73621944|sp|Q6C9Q1.1|SPB1_YARLI RecName: Full=AdoMet-dependent rRNA methyltransferase SPB1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|49648479|emb|CAG80799.1| YALI0D09251p [Yarrowia lipolytica CLIB122]
Length = 850
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 150/365 (41%), Positives = 217/365 (59%), Gaps = 52/365 (14%)
Query: 1 MGKVKGKH---RLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGW 56
MGK++ KH RLD YYRLAKE GYR+R+S+K++Q++ K+ FL S V+DLCAAPG W
Sbjct: 1 MGKIQKKHGKGRLDHYYRLAKEKGYRARSSFKIIQINQKYGKFLEKSKVVIDLCAAPGSW 60
Query: 57 MQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
QVA Q PV SL++G D+VPI P+ ++ + DIT CR ++++ M+ D V+
Sbjct: 61 CQVASQLCPVNSLIIGCDIVPIKPLPNVITFQSDITTDHCRQQLRQYMKTWKA---DTVM 117
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
HDG+PNVG AWAQ+A +Q+ LV+ S+KLA +FL GTFVTKVFRS+DY+++++ +Q F
Sbjct: 118 HDGAPNVGMAWAQDAFTQSELVLQSLKLAVEFLNKGGTFVTKVFRSKDYNNLMWVFQQFF 177
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF----QGSVEPRKVVDVLR 232
EKVE KP +SR+ SAEI+++ +K+KAP KIDPRLLD KY+F QG+ V
Sbjct: 178 EKVEATKPPSSRNVSAEIFVVCLKFKAPKKIDPRLLDAKYVFEEVSQGN--NNNEAKVFN 235
Query: 233 GTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFG-------------- 278
++R R+GYE+G+ K DFI + P++ LG +T+
Sbjct: 236 PEVKRRKREGYEEGEYLQHKRLSILDFITDSTPIDNLGETNEMTWTPRSIKEGEVDEEEE 295
Query: 279 -------------------------DPACSAIKDHELTTEEVKALCDDLRVLGKQDFKHL 313
+ A + TT E+ DL+VLG+++F+ +
Sbjct: 296 KEKDKEARDERGNVQYVLDDKVYSDEDALKMVSKLPQTTPELLECLKDLKVLGRKEFRAI 355
Query: 314 LKWRM 318
LKWR+
Sbjct: 356 LKWRL 360
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 185/385 (48%), Gaps = 50/385 (12%)
Query: 443 EHVS------SDIDSDEERRKYDEQLEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQEDQ 496
EHV+ D SD+E +++LE + + EN A+ S +QRK+A +
Sbjct: 470 EHVTLEEAERVDYGSDDEANGLEDELESMYTEYLENKAARTAKSVVQRKKANVETEEWFG 529
Query: 497 LSE---GDEDEDTMHTSYDSDKDQGDLDANPLMVPLDDGIRPTQEEITN--KWFSQEIFA 551
+S+ GDE + M D+D + D+ T + N +FS IF
Sbjct: 530 ISDKKDGDESDGEMSAD--------DVDMATIDDGEDEDDGKTARTLNNGNMFFSNPIFD 581
Query: 552 EAVQNG-----------DLGKLGSEDETQVDKQAEKHSIPEKAKQKMANDAAGPKSTHNQ 600
V DL + G++D +++K ++ + + +D+ +
Sbjct: 582 NLVNAAVAKTEAKPKALDLLEPGAKDLIELEKAKKRKYAKKNGLE--YSDSEDEEDDIVM 639
Query: 601 VSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQREQILDDAYN 660
++ + D +I G SDD + + ++ T A LA + + ++ DD YN
Sbjct: 640 ETQKQDDSDIEYVHGESDSDDEPNIDLVTDQAMTMAHQLATGQT-----NKHKLQDDGYN 694
Query: 661 RYMFDD-DGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKR 719
RY F D DGLP WF ++E +H + +P+TKE + A+K + K ++ARP KKV EAK RKK
Sbjct: 695 RYSFRDLDGLPQWFQDDENKHNKLNKPITKEAVEALKQKMKTLNARPIKKVLEAKGRKKM 754
Query: 720 VAMRKLEKVRKKANVISDQADISDRSKRKQIEQLY-KSAVPKRPKKEYVVA------KKG 772
A+R+LE+++KK+ +I++ S++ K I +L K A P++ KK+ V KG
Sbjct: 755 RALRRLEQMKKKSELINEDGARSEKEKADDISKLMRKLAKPQKSKKKTVTVVYAGGKNKG 814
Query: 773 VQVR----AGKGKVLVDPRMKKDSR 793
+ R GK K +VD MKK+ R
Sbjct: 815 IAGRPRGVTGKYK-MVDGTMKKEQR 838
>gi|126308657|ref|XP_001376931.1| PREDICTED: putative rRNA methyltransferase 3-like [Monodelphis
domestica]
Length = 839
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 142/322 (44%), Positives = 217/322 (67%), Gaps = 10/322 (3%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
GKV GK R DK+Y LAKE G+RSR+++KL+QL+ +F FL+ + A+LDLCAAPGGW+QVA
Sbjct: 5 GKV-GKSRRDKFYHLAKETGFRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAS 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ +PV SL++G+DLVPI PI V+L++DIT +CR ++K ++ V D+VL+DG+P
Sbjct: 64 KFMPVSSLIVGVDLVPIKPIPNVVTLQEDITTEKCRQALRKELKTWKV---DVVLNDGAP 120
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG +W +A SQ L + +++LA FLA G F+TKVFRS+DY +L+ +QLF V+
Sbjct: 121 NVGASWVHDAYSQAHLTLMALRLACDFLARGGCFITKVFRSRDYQPLLWIFQQLFRHVQA 180
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHR 240
KP ASR SAEI+++ + AP KID + D K+ F + V+ + V +++ TK+K
Sbjct: 181 TKPQASRQESAEIFVICQGFLAPDKIDSKFFDPKFAFKEVEVQAKTVTELV--TKKKPKA 238
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
+GY +GD TL TDF+ + NP++ L + I D ++ H T+E++K C
Sbjct: 239 EGYAEGDLTLYHRVSITDFLRAANPVDFLSKASEIMLDD---KELEQHPATSEDIKVYCQ 295
Query: 301 DLRVLGKQDFKHLLKWRMQIKK 322
D++VLG+++ + LL WR ++++
Sbjct: 296 DIKVLGRKELRSLLNWRTKLRR 317
>gi|10954014|gb|AAG25705.1| SPB1-like protein [Kazachstania servazzii]
Length = 842
Score = 291 bits (746), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 179/499 (35%), Positives = 277/499 (55%), Gaps = 47/499 (9%)
Query: 1 MGKVKGKH---RLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGW 56
MGK + K+ RLD+Y LAKE GYR+R+S+K++Q++ KF FL S V+DLCAAPG W
Sbjct: 1 MGKTQKKNSKGRLDRYLYLAKEKGYRARSSFKIIQINEKFGHFLEKSKVVVDLCAAPGSW 60
Query: 57 MQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
QVA + PV SL++G+D+VP+ P+ ++ + DIT +CR++++ M+ D VL
Sbjct: 61 CQVATKLCPVNSLIIGVDIVPMKPMPNVITFQSDITTEDCRSKLRGYMKTWKA---DTVL 117
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
HDG+PNVG W Q+A +Q+ L + ++KLA + L GTFVTK+FRS+DY+ +++ +QLF
Sbjct: 118 HDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLVVNGTFVTKIFRSKDYNKLIWVFQQLF 177
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVD--VLRGT 234
+KVE KP +SR+ SAEI+++ +KAP K+DPRLLD K +F+ + + ++ +
Sbjct: 178 DKVEATKPPSSRNVSAEIFVVCKGFKAPKKMDPRLLDPKEVFEELPDGPQNMESKIYNPE 237
Query: 235 KQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTS--ITFGDPACSAIKDHELTT 292
K+ R R GYE+GD L + D I + +P+ +LG + I D +K + TT
Sbjct: 238 KKTRKRQGYEEGDNLLYHTTPIMDLIKTEDPITMLGEMNKFDIIDDDHEWKVVKKMKQTT 297
Query: 293 EEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRV 352
E+ +DL+VLGK+DFK +L+WR + +K P + E + + + +
Sbjct: 298 TELLLCIEDLKVLGKKDFKMILRWRKNARDLL-GLDKDEEEEITETPLDEEEQIEKELQG 356
Query: 353 LNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSS---- 408
L E + L+ ++R+K E K K+ + + T + + LF+L S
Sbjct: 357 LQEKKRLQTKREKRRKNETK--QKEIIRMQMNMLTPRDLGIEAASVGQDSLFNLKSAEKT 414
Query: 409 ------IKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDE--ERRKYDE 460
KGKK + +E+E N V ID +E ER KY E
Sbjct: 415 GILDKLAKGKKRMIF--------------TEEELAN-----DVDIHIDENEVVERNKYTE 455
Query: 461 --QLEEVLDQAYENYVAKR 477
LE LD YENY +++
Sbjct: 456 ADDLEAQLDSMYENYKSRK 474
>gi|401840074|gb|EJT42995.1| SPB1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 840
Score = 291 bits (745), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 235/381 (61%), Gaps = 12/381 (3%)
Query: 1 MGKVKGKH---RLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGW 56
MGK + K+ RLD+YY LAKE GYR+R+S+K++Q++ K+ FL S V+DLCAAPG W
Sbjct: 1 MGKTQKKNSKGRLDRYYYLAKEKGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSW 60
Query: 57 MQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
QVA + P+ SL++G+D+VP+ P+ ++ + DIT +CR++++ M+ D VL
Sbjct: 61 CQVASKLCPINSLIIGVDIVPMKPMPNVITFQSDITTEDCRSKLRGYMKTWKA---DTVL 117
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
HDG+PNVG W Q+A +Q+ L + ++KLA + L GTFVTK+FRS+DY+ +++ +QLF
Sbjct: 118 HDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLVVNGTFVTKIFRSKDYNKLIWVFQQLF 177
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVD--VLRGT 234
EKVE KP ASR+ SAEI+++ +KAP ++DPRLLD K +F+ + ++ ++ +
Sbjct: 178 EKVEATKPPASRNVSAEIFVVCKGFKAPKRLDPRLLDPKEVFEELPDGQQNMESKIYNPE 237
Query: 235 KQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF--GDPACSAIKDHELTT 292
K+ R R GYE+GD L + DF+ + +P+ +LG T D ++ + TT
Sbjct: 238 KKVRKRQGYEEGDNLLYHETSILDFVKTEDPITMLGEKNKFTIDKDDHEWKILEKLKQTT 297
Query: 293 EEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEK-ATVPASASAPTEGENEEDADNR 351
EE + +DL+VLGK+DFK +L+WR + + K P E + + D +
Sbjct: 298 EEFHSCIEDLKVLGKKDFKMILRWRKVARDILGTEVKDGDSTEIEIVPLTEEEQIEKDLQ 357
Query: 352 VLNEMEELKYAMDQRKKREKK 372
L E + L ++R+K E K
Sbjct: 358 GLQEKQRLNIKRERRRKNEMK 378
>gi|403214643|emb|CCK69143.1| hypothetical protein KNAG_0C00300 [Kazachstania naganishii CBS
8797]
Length = 841
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 143/325 (44%), Positives = 214/325 (65%), Gaps = 11/325 (3%)
Query: 1 MGKVKGKH---RLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGW 56
MGK + K+ RLD+YY LAKE GYR+R+S+K++Q++ KF FL S V+DLCAAPG W
Sbjct: 1 MGKTQKKNSKGRLDRYYYLAKEKGYRARSSFKIIQINEKFGHFLEKSKVVIDLCAAPGSW 60
Query: 57 MQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
QVA + P+ SL++G+D+VP+ + ++ + DIT +CR++++ M+ D VL
Sbjct: 61 CQVASKLCPINSLIIGVDIVPMKSMPNVITFQSDITTDDCRSKLRGYMKTWKA---DTVL 117
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
HDG+PNVG WAQ+A +Q+ L + ++KLA L GTFVTK+FRS+DY+ +++ +QLF
Sbjct: 118 HDGAPNVGLGWAQDAFTQSHLTLQALKLAVDNLVVNGTFVTKIFRSKDYNKLMWVFQQLF 177
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVE-PRKVVDVLRGTK 235
EKVE KP ASR+ SAEI+++ +KAP K+DPRLLD K +F+ + P+ + + +
Sbjct: 178 EKVEATKPPASRNVSAEIFVVCKGFKAPKKLDPRLLDPKEVFEELPDGPQNMESKIYNPE 237
Query: 236 QK-RHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF--GDPACSAIKDHELTT 292
+K R R GYE+GD L + DFI +P+ +LG + T D +K + T
Sbjct: 238 KKVRKRQGYEEGDNLLYHTAPILDFIKDEDPITMLGKLNKFTIDEDDHEWQIVKKMKQTN 297
Query: 293 EEVKALCDDLRVLGKQDFKHLLKWR 317
+E+ A +DL+VLGK+DFK +L+WR
Sbjct: 298 KELLACIEDLKVLGKKDFKMILRWR 322
>gi|68491984|ref|XP_710229.1| potential rRNA methyltransferase [Candida albicans SC5314]
gi|46431392|gb|EAK90964.1| potential rRNA methyltransferase [Candida albicans SC5314]
Length = 853
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 183/519 (35%), Positives = 285/519 (54%), Gaps = 61/519 (11%)
Query: 1 MGKVKGKH---RLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGW 56
MGK + KH RLD+YY LAKE GYR+R+S+K++Q++ K+ FL S V+DLCAAPG W
Sbjct: 1 MGKQQKKHSKGRLDRYYYLAKEKGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSW 60
Query: 57 MQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
QVA Q P+ SL++G+D+VPI P+ ++ + DIT +CR+R++ M+ D VL
Sbjct: 61 CQVASQLCPINSLIIGVDIVPIKPLPNVITFQSDITTEDCRSRLRGHMKTWKA---DTVL 117
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
HDG+PNVG W Q+A +Q+ L + ++KLA + L GTFVTK+FRS+DY+++++ +QLF
Sbjct: 118 HDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLTAGGTFVTKIFRSRDYNNLMWVFQQLF 177
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ---GSVEPR-----KVV 228
EKVE KP ASR+ SAEI+++ +KAP K+DPRLLD K +F+ G E + K+
Sbjct: 178 EKVEATKPPASRNVSAEIFVVCKGFKAPKKLDPRLLDPKEVFEELGGGNESKQNNEAKIF 237
Query: 229 DVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPA------- 281
+ + + Q R R GY++GD TL DFI ++P+ LGS+ P
Sbjct: 238 NPEKFSSQ-RQRQGYQEGDYTLFHTMPIMDFIKQDDPINQLGSLNKFDLPAPKDDDNDDD 296
Query: 282 -------CSAIKDHELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFS-SAEKATVP 333
+ +L T E+ DL+VLG+++FK +LK+R Q + ++
Sbjct: 297 DHDHDHEWKILSKLKLCTPELLECIKDLKVLGRKEFKMILKFRKQARDILGIDKDEEEEE 356
Query: 334 ASASAPTEGENEEDADNRVLNEMEELKYAMDQRKKREKK----LLAKKRAKDKARKATGM 389
+ E EE ++ E+++L Q+ KR KK L K+ +++ T M
Sbjct: 357 ENPKIEVEPLTEE---QKIDQELQDLINKQKQKAKRLKKNANELKQKEIIRNQMNMLTDM 413
Query: 390 QIDVMQDDYTDHELFSLSS----------IKGKKDLAAVEYDDDDVNAAAEDSEDERPNR 439
I + LF+L + KGKK + ++D+++ ++D +
Sbjct: 414 NIGIEAAQIGADSLFNLKTAEKTGQLDKLAKGKKKMI---FNDEEL------AKDNEIHI 464
Query: 440 DTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENYVAKRG 478
D +E +D DS +E ++LE LD Y Y A++
Sbjct: 465 DEEEINDNDKDSADEL----DELENQLDDMYHQYQARKA 499
>gi|2695746|emb|CAA11034.1| Pmt2 [Schizosaccharomyces pombe]
Length = 663
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 235/701 (33%), Positives = 382/701 (54%), Gaps = 74/701 (10%)
Query: 141 SVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIK 200
S+KLA +FL GTFVTKVFRS+DY+++L+ KQLF KVE KP +SR+ SAEI+++
Sbjct: 2 SMKLACEFLVAGGTFVTKVFRSRDYNNLLWVFKQLFNKVEATKPPSSRNVSAEIFVVCRG 61
Query: 201 YKAPAKIDPRLLDVKYLFQGSVEPRKVVD--VLRGTKQKRHRDGYEDGDTTLRKVSLATD 258
YKAP K+DPR D + +F+ EP VD V K+KR R+GY D D TL K LA++
Sbjct: 62 YKAPKKLDPRFTDPRTVFEEVQEPVTNVDAKVFHPEKRKRSREGYADDDYTLHKTVLASE 121
Query: 259 FIWSNNPLEILGSVTSITF--GDPACSAIKDHELTTEEVKALCDDLRVLGKQDFKHLLKW 316
F+ +N+P++ILG+ I F D C + + ++TTEE+ C DL+VLGK++F+ +L+W
Sbjct: 122 FVTANDPIQILGTSAEIVFPKDDEECQRLYNLDVTTEEILLCCSDLQVLGKKEFRDILRW 181
Query: 317 RMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEELKYAMDQRKKREKKLLAK 376
R++I+ +K V E E D + R+ E+++L A + KRE++ +
Sbjct: 182 RLKIRDEMGIGKK--VEDEQKTVVEEIPEMDEEERLDQELQDLSEAERVKLKRERRKANQ 239
Query: 377 KRAKDKARKATG----MQIDVMQDDYTDHELFSLSSIK--GKKDLAAVEYDDDDVNAAAE 430
++ ++ R G M I + + + LF L++ + G K+L ++
Sbjct: 240 RKQREIVRMQMGMLAPMDIGLEHEAMGEDSLFGLATAEKHGLKEL-------ENGTLPVT 292
Query: 431 DSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENYVAKRGGSTMQRKRAKKA 490
+S DE + D + + DSD+ER ++LE LD Y +Y ++ S + + R KKA
Sbjct: 293 ESVDEEVSTDNE----VEYDSDDER----DRLEADLDSMYSDYTKRKAESDV-KYRVKKA 343
Query: 491 YAQEDQLSEGDEDEDTMHTSYDSDKDQ------GDLDANPLMVP-LDDGIRPTQEEITNK 543
D DE+ + + +SD Q D + L LD G T++ ++ K
Sbjct: 344 RGDLD-----DEEWNGIDNGTESDDSQIAETNFATPDKDRLTTSLLDKG--STKDGLSRK 396
Query: 544 ---WFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKMANDAAGPKSTHNQ 600
+F Q+IF + +++ D V+ + + +K + ++A+ S +Q
Sbjct: 397 ARMFFDQDIF-DGIEDAD---------ADVEIMSMNRAAIKKREAELASQNNDDGSKGDQ 446
Query: 601 VSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTK---AEILACAKKML-RKKQREQILD 656
+ E+VP A DD + +S+++E + + AE + A+ + R+K + ++D
Sbjct: 447 SEDSNDHIEVVPVASAHDEDDDWNSDSDNDENNVEIVTAEAMTLAQDIASRRKSKADLID 506
Query: 657 DAYNRYMFDD-DGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKA 715
+ YNR+ F +GLPDWFL+EE + +P+TKE + A++ + K ++ARP KKV EA+
Sbjct: 507 EGYNRWSFQSKEGLPDWFLDEETTVNKPNKPITKEAVLALREKMKALNARPIKKVLEAQG 566
Query: 716 RKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKE--YVVAK--- 770
RKK +++L++V KKA IS+ D+++ K K+I +L A +PK + VVAK
Sbjct: 567 RKKMRTIKRLQRVAKKAEGISESGDMTESEKAKEISRLVSRATKSKPKAKPTLVVAKGPN 626
Query: 771 KGVQVR--AGKGKV-LVDPRMKKDSRTHGSGKARKGGSKKG 808
KG++ R KGK +VD RMKKD R A+K +KKG
Sbjct: 627 KGLKSRPKGVKGKYKMVDSRMKKDLR------AQKRLAKKG 661
>gi|71029650|ref|XP_764468.1| rRNA methyltransferase [Theileria parva strain Muguga]
gi|68351422|gb|EAN32185.1| rRNA methyltransferase, putative [Theileria parva]
Length = 924
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 150/379 (39%), Positives = 223/379 (58%), Gaps = 47/379 (12%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK+RLDKYY LAKEHGYRSR+++K++QL KF+ ++ + ++DLCAAPGGW+QVA ++P
Sbjct: 8 GKNRLDKYYHLAKEHGYRSRSAFKIIQLAKKFNIFQNCNVLVDLCAAPGGWLQVASNQLP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V S ++G+DLVPI PI+G ++ + DI P+C + + + +G+ + D+VLHDGSPN+G
Sbjct: 68 VSSTIIGVDLVPIKPIKGVITFQADIRTPKCHSLITNQL--NGL-SVDVVLHDGSPNMGC 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
W +A +QN LV+ + KLA L G FVTKVFRS DY+S+++ L FE+V+V KP
Sbjct: 125 NWNLDAFNQNVLVLTAAKLACSLLRKGGIFVTKVFRSSDYNSLVWMLGNCFERVKVTKPQ 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPR---------------KVVDV 230
+SR+ SAEI+ + I +K+ IDPRL + ++FQ S P K ++
Sbjct: 185 SSRNVSAEIFAVCIGFKSLKLIDPRLFNADFVFQSSNTPLSIEDDKSAKTKNQAPKTLNQ 244
Query: 231 LRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFG------------ 278
L ++K +R+GY DG ++S+ DF+ S P IL + + F
Sbjct: 245 LLKEQKKTNREGY-DG-AIYSEISV-IDFLKSKEPATILVTHNKLLFTTTHNCINSNHNS 301
Query: 279 --------------DPACSAIKDHELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAF 324
D S +++ LTTEE+K LC DL+V GK D + LLKWR ++ +
Sbjct: 302 VNSSINSTTGTIGDDDVLSMVEESPLTTEEIKLLCSDLKVAGKSDLQSLLKWRFKLINSI 361
Query: 325 SSAEKATVPASASAPTEGE 343
S + + S S E E
Sbjct: 362 PSLNRKSSEQSESLKPEDE 380
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 134/293 (45%), Gaps = 56/293 (19%)
Query: 528 PLD---DGIRPTQEEITNKWFSQEIFAEAVQN-GDLGKLGSEDETQVDKQAEKHSIPEKA 583
PLD D + +T +WF +IF N G GK +D + + K S P +
Sbjct: 645 PLDGDFDNSEALDDLVTKRWFDNDIFTLQTNNQGKYGKPPKQDRVE-NSDKPKLSNPSEE 703
Query: 584 KQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEV----DTKAEIL 639
+ K++N SE + +VPA SE EE+ + AE
Sbjct: 704 RLKLSNP-----------SEENVEMRVVPAIS----------NSEREELLGDPEKLAEFQ 742
Query: 640 ACAKKMLRKKQREQILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQF 699
A M+ KK R ++D AYN+ F D+ LP WF+E+E +H + PVTKE + K +
Sbjct: 743 ALGSLMINKKTRMALIDGAYNKRTFTDEDLPSWFVEDENKHNKPQYPVTKELVKKYKQKL 802
Query: 700 KEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVP 759
E+ RP KKV EAK RK + A ++L + K IS+ + S + +K + L K
Sbjct: 803 LELKNRPIKKVLEAKHRKAQRAKKRLRSILPKIEAISNDRE-STENPKKLLRGLKKIQST 861
Query: 760 KRPKKEYVVAKKGVQVRAGKG-----------------KVL--VDPRMKKDSR 793
+R +K YV+++ RA G KVL VD RMK+D+R
Sbjct: 862 RR-QKVYVISR-----RANVGKLSKQSKSGKSSGKGARKVLKHVDRRMKQDNR 908
>gi|149236601|ref|XP_001524178.1| AdoMet-dependent rRNA methyltransferase SPB1 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146452554|gb|EDK46810.1| AdoMet-dependent rRNA methyltransferase SPB1 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 799
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 177/498 (35%), Positives = 279/498 (56%), Gaps = 39/498 (7%)
Query: 1 MGKVKGKH---RLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGW 56
MGK + K+ RLD+YY LAKE GYR+R+S+K++Q++ KF FL S V+DLCAAPG W
Sbjct: 1 MGKTQKKNSKGRLDRYYYLAKEKGYRARSSFKIIQINEKFGHFLEKSKVVIDLCAAPGSW 60
Query: 57 MQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
QVA Q P+ SL++G+D+VPI P+ ++ + DIT +CR++++ M+ D VL
Sbjct: 61 CQVASQLCPINSLIIGVDIVPIKPLPNCITFQSDITTEDCRSKLRGHMKTWKA---DTVL 117
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
HDG+PNVG W Q+A +Q+ L + ++KLA + L GTFVTKVFRS+DY+++++ +QLF
Sbjct: 118 HDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLTAGGTFVTKVFRSRDYNNLMWVFQQLF 177
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVD----VLR 232
EKVE KP +SR+ SAEI+++ +KAP K+DPRLLD + +F+ +K + +
Sbjct: 178 EKVEATKPPSSRNVSAEIFVVCKGFKAPKKLDPRLLDPREVFEELNNDKKNANNEEKIFN 237
Query: 233 GTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF--GDPACSAIKDHEL 290
K++R R GYE+GD TL FI +P+ LG + D +K +
Sbjct: 238 PEKKRRQRQGYEEGDYTLFHTMPIMQFIKEEDPINQLGDLNKFEIDEDDHEWKIVKKLKT 297
Query: 291 TTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADN 350
TEE+K DL+VLG+++FK +L++R Q + + P E + D +
Sbjct: 298 YTEELKECFKDLKVLGRKEFKMILRFRKQARDLLGIDKVEEAPEIEVEELTEEQKIDKE- 356
Query: 351 RVLNEMEELKYAMDQRKKREKKLLAKKR-AKDKARKATGMQIDVMQDDYTDHELFSLSSI 409
LNEM E + +R K+ + +K +++ + T M I + LF+L +
Sbjct: 357 --LNEMMERQKQKAKRAKKTANEIKQKEIVRNQMQMVTDMNIGIDAAQIGAESLFNLKTA 414
Query: 410 KGKKDLA-------AVEYDDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDE-- 460
+ L+ A+ ++D+D+ +DT+ H+ D ++ E+ DE
Sbjct: 415 EKSGQLSKLAAGKKAMVFNDEDI------------AKDTEIHIDEDAEA-EDGDSADEVD 461
Query: 461 QLEEVLDQAYENYVAKRG 478
+LE LD Y+ Y +R
Sbjct: 462 ELEGQLDGMYQQYQERRA 479
>gi|146416169|ref|XP_001484054.1| hypothetical protein PGUG_03435 [Meyerozyma guilliermondii ATCC
6260]
Length = 819
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 159/405 (39%), Positives = 246/405 (60%), Gaps = 21/405 (5%)
Query: 1 MGKVKGKH---RLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGW 56
MGK + K+ RLDKYY LAKE GYR+R+S+K++Q++ K+ FL S V+DLCAAPG W
Sbjct: 1 MGKTQKKNSKGRLDKYYFLAKEKGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSW 60
Query: 57 MQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
QVA P+ SL++G+D+VPI P+ ++ + DIT +CR+R++ M+ D VL
Sbjct: 61 CQVASNLCPINSLIIGVDIVPIKPLPNCITFQSDITTEDCRSRLRGHMKTWKA---DTVL 117
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
HDG+PNVG W Q+A +Q+ L + ++KLA + L GTFVTK+FRS+DY+++++ +QLF
Sbjct: 118 HDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLTLGGTFVTKIFRSRDYNNLMWVFQQLF 177
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVE-PRKV-VDVLRGT 234
EKVE KP ASR+ SAEI+++ +KAP K+DPRLLD K +F+ + P+ +
Sbjct: 178 EKVEATKPPASRNVSAEIFVVCKGFKAPKKLDPRLLDPKEVFEELADGPQNNEAKIYNPE 237
Query: 235 KQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDP---ACSAIKDHELT 291
K+ R R GYE+GD L DFI +P+ L ++ +T D +K +
Sbjct: 238 KKVRRRQGYEEGDYLLYHELPILDFIKDEDPINTLATLNKLTMPDKDNHEWKIVKKLKSY 297
Query: 292 TEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNR 351
T E+ DL+VLGK++FKH+LK+R Q ++ VP E E E D +
Sbjct: 298 TPELVECFTDLKVLGKKEFKHILKFRKQARELLG----LDVPEETKPEIEVE-ELTEDQK 352
Query: 352 VLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQD 396
+ E++ AM ++++++ K + K + K ++ MQ++++ D
Sbjct: 353 IDKELQ----AMTEKQRQKAKRIKKNANELKQKEIQRMQMNMLTD 393
>gi|196011812|ref|XP_002115769.1| hypothetical protein TRIADDRAFT_59807 [Trichoplax adhaerens]
gi|190581545|gb|EDV21621.1| hypothetical protein TRIADDRAFT_59807 [Trichoplax adhaerens]
Length = 807
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 163/427 (38%), Positives = 251/427 (58%), Gaps = 41/427 (9%)
Query: 13 YYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLG 72
+Y+LAKE GYR+R+++KL+QL+ KF FL +S ++DLCAAPGGW+QVA + +P+ SL++G
Sbjct: 15 FYKLAKETGYRARSAFKLIQLNRKFQFLETSRVLVDLCAAPGGWLQVASRFMPISSLIVG 74
Query: 73 LDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAM 132
+DLV I PI ++L DIT C+ +KK E H +A D VLHDG+PNVG AW Q+A
Sbjct: 75 VDLVTIKPIPNVITLTGDITTDACKQAIKK--ELHTWKA-DSVLHDGAPNVGQAWVQDAF 131
Query: 133 SQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASA 192
SQ L + +++LA Q L G F+TKVFRS+DY S+++ +QLF+KV KP
Sbjct: 132 SQAQLTLSALRLACQLLKRGGCFITKVFRSKDYYSLMWVFQQLFKKVHATKPQG------ 185
Query: 193 EIYLLGIKYKAPAKIDPRLLDVKYLF---QGSVEPRKVVDVLRGTKQKRHRDGYEDGDTT 249
+ AP KIDP+ LD K++F + + K+ + ++ R+R GY D T
Sbjct: 186 --------FLAPDKIDPKFLDSKHIFKDIETETKQNKINLMFSEKRKDRNRAGYPDNKHT 237
Query: 250 LRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLRVLGKQD 309
L + TDFI S N L+ L S ++TF D I H LTTEE+K C D++VLG+++
Sbjct: 238 LFTSTPVTDFITSENYLDHLASSNTLTF-DEDSLIIAKHPLTTEEIKTYCQDIKVLGRKE 296
Query: 310 FKHLLKWRMQIKKAF----SSAEKATVPASASAPTEGENEEDADNRVLNE---------- 355
+ L+KWR I+ + +++E SA E +++EDA + + E
Sbjct: 297 IRTLIKWRSDIRDFYEQKATASETKKTENDESAGVESDDDEDAAKKKIEEFENEEASERK 356
Query: 356 ---MEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQI-DVMQDDYTDHELFSLSSIKG 411
+ ++ M +++R K++ K++A++ R+ M++ D + D+ LFSLS+I
Sbjct: 357 SHLLIHIQNMMMIKRQRRKRMQLKRKARE--RQLLKMKVPDSGINLSEDNSLFSLSTITD 414
Query: 412 KKDLAAV 418
K L+ V
Sbjct: 415 PKKLSNV 421
>gi|405968832|gb|EKC33861.1| Putative rRNA methyltransferase 3 [Crassostrea gigas]
Length = 711
Score = 289 bits (740), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 172/421 (40%), Positives = 261/421 (61%), Gaps = 15/421 (3%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R DK+Y LAKE GYR+R+++KL+QL+ KF FL+ + V+DLCAAPGGW+QV + P
Sbjct: 8 GKSRKDKFYHLAKETGYRARSAFKLIQLNRKFEFLQRARVVIDLCAAPGGWLQVVAENTP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V S++LG+DLVPI PI +L DIT +CR +KK E H +A D+VL+DG+PNVG
Sbjct: 68 VSSVILGVDLVPIRPIGNVKTLVDDITTDKCRQDLKK--ELHTWKA-DVVLNDGAPNVGK 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
W +A Q L + ++KLAT+FL G FVTKVFRS+DY+S+++ +QLF+ V KP
Sbjct: 125 NWLHDAFQQAQLALQALKLATEFLKKGGWFVTKVFRSKDYNSLMWVFQQLFKHVHATKPQ 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQG-SVEPRKVVDVLRGTKQKRHRDGYE 244
ASR+ SAEI+++ K+ AP KIDP+ LD KY+F+ EP+ ++++ K+ R R+GY
Sbjct: 185 ASRNESAEIFVVCEKFLAPDKIDPKFLDPKYVFKDVEEEPKTGINLIHPEKRTRQREGYP 244
Query: 245 DGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLRV 304
+GD TL A++FI S+N L +L + P I +H+ TT E+K D++V
Sbjct: 245 EGDYTLFHSLKASEFINSDNYLNLLAQRNEVILDLP---EIANHKETTTELKECLKDIKV 301
Query: 305 LGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEELKYAMD 364
LGK++ ++++ WR ++K A+ AT A + + E+ D + + + +
Sbjct: 302 LGKREIRNVISWRKKLK-----ADLATAKAPPESAKQEVEEDSEDEEAQLDEKLAELKEE 356
Query: 365 QRKKREKKLLAKKRAKDKARKATGMQIDV---MQDDYTDHELFSLSSIKGKKDLAAVEYD 421
++K ++KL +R K K R +++ + +QD D LF+L+ IK K L +VE
Sbjct: 357 EQKALKRKLKKVRREKVKLRHKMDLKMVIPGDIQDFSDDVGLFNLNKIKNKSQLDSVEKG 416
Query: 422 D 422
D
Sbjct: 417 D 417
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 93/165 (56%), Gaps = 43/165 (26%)
Query: 639 LACAKKMLR-KKQREQILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKA 697
+A +M++ +K++ +I++ Y+R+MF+DD LPDWF ++E +H + PVTKE
Sbjct: 552 MAIGSQMVQSRKRKREIMEGGYHRFMFNDDNLPDWFRQDESKHCRVTLPVTKE------- 604
Query: 698 QFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSA 757
++KLE+VRKKA ISD AD++DR K QI+Q+YK A
Sbjct: 605 ------------------------VKKLERVRKKAEAISDTADVADRDKWMQIKQIYKKA 640
Query: 758 -VPKRPKKE--YVVAKKGVQVRA-------GKGKVLVDPRMKKDS 792
+ + KKE YVVAKKG R G KV VDPRMKKD+
Sbjct: 641 GLLSKKKKEITYVVAKKGTGKRVRRPQGVQGPFKV-VDPRMKKDN 684
>gi|302662114|ref|XP_003022716.1| hypothetical protein TRV_03177 [Trichophyton verrucosum HKI 0517]
gi|291186676|gb|EFE42098.1| hypothetical protein TRV_03177 [Trichophyton verrucosum HKI 0517]
Length = 783
Score = 289 bits (740), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 158/381 (41%), Positives = 224/381 (58%), Gaps = 45/381 (11%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+YRLAKE GYR+RA++KL+QL+ K+ FL
Sbjct: 8 GKGRLDKWYRLAKEKGYRARAAFKLIQLNKKYGFLEK----------------------- 44
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
+G+DL PI PI ++ + DIT +CRA +++ + D VLHDG+PNVG
Sbjct: 45 -----IGVDLSPIKPIPKVITFQSDITTDKCRATIRQHFKTWKA---DTVLHDGAPNVGT 96
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A SQ LV+ S+KLAT+FL P GTFVTKVFRS+DY+ +L+ KQLF VE KP
Sbjct: 97 AWVQDAFSQAELVLQSLKLATEFLVPGGTFVTKVFRSKDYNPLLWVFKQLFTTVEATKPP 156
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGY 243
+SR+ SAEI+++ + +KAP IDP+ LD K++F P V K+KR RDGY
Sbjct: 157 SSRNVSAEIFVVCLGFKAPKHIDPKFLDPKHVFAELQDPNPNNEAKVFNPEKKKRKRDGY 216
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKAL 298
E+ D T K AT+FI + +P+ ILGS +TF GD A + ++ TT E++
Sbjct: 217 EENDWTQHKELPATEFINTTDPISILGSYNKLTFTQSPGGDLALATLQRLPETTNEIRMC 276
Query: 299 CDDLRVLGKQDFKHLLKWRMQIKKAFSSAEK-------ATVPASASAPTEGENEEDADNR 351
C+DL+VLGK+DF+ LL+WR+++++ F A K T + P + E D R
Sbjct: 277 CEDLKVLGKKDFRQLLRWRIKVREKFGLAVKKGPKNEEETEEVAEVEPMDEELALQEDLR 336
Query: 352 VLNEMEELKYAMDQRKKREKK 372
++E E K ++RK+ E+K
Sbjct: 337 RMHERETSKNKRERRKENERK 357
>gi|66357152|ref|XP_625754.1| Spb1p-like, FtsJ methylase [Cryptosporidium parvum Iowa II]
gi|46226949|gb|EAK87915.1| Spb1p-like, FtsJ methylase [Cryptosporidium parvum Iowa II]
Length = 1011
Score = 289 bits (740), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 163/397 (41%), Positives = 222/397 (55%), Gaps = 58/397 (14%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLD+YY LAKE GYR+R+++KL+QL KF+ ++ ++DLCAAPGGW+QVA + +
Sbjct: 8 GKDRLDRYYHLAKEQGYRARSAFKLIQLAQKFNIFKNCQVLVDLCAAPGGWLQVAKRNMG 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V S ++G+DLV I I G + + DIT CR K + +E D+VLHDG+PNVG
Sbjct: 68 VSSKIIGVDLVAIKGIPGVTTFKCDITTERCR---KLIFDELNGIPVDVVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
+W ++A QN LV+ S +LA + L P G FVTKVFRS DY+SVL+ L QLF V+ KP
Sbjct: 125 SWDKDAYIQNELVLHSAELACEILRPNGIFVTKVFRSTDYNSVLWVLSQLFNTVKATKPQ 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVL-------------- 231
+SR+ SAEI+L+ + YKAP KID R D KY+FQ + E + V++L
Sbjct: 185 SSRNVSAEIFLVCLGYKAPKKIDSRFFDPKYVFQSNKEENEGVNLLPLGDDQPMDDESGS 244
Query: 232 ------------RGTKQ--------------KRHRDGYEDGDTTLRKVSLATDFIWSNN- 264
R TK+ KR+RDGYE GD R +S A DF + N
Sbjct: 245 ENTEDNDNKLINRKTKKSMKSSLSELIKGIGKRNRDGYEKGD-DFRMIS-AYDFFHAENP 302
Query: 265 PLEILGSVT----------SITFGDPACSAIKDHELTTEEVKALCDDLRVLGKQDFKHLL 314
PL +L S T S T + +H T E+K LC+DL+VLGK++ LL
Sbjct: 303 PLLLLKSNTINLNPKKVDESNTLERDFIDLVLNHPKTNHEIKLLCEDLKVLGKKELMQLL 362
Query: 315 KWRMQIKKAF--SSAEKATVPASASAPTEGENEEDAD 349
KWR + K +S K S +N +D+D
Sbjct: 363 KWRFLVLKDIKANSIGKKDSLTSKEKNVTNDNNDDSD 399
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 181/408 (44%), Gaps = 74/408 (18%)
Query: 453 EERRK--YDEQLEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQEDQLSEGD-EDEDTMHT 509
E RRK + +EE+ + N + + + +K ++AY+ +D + D E+E M
Sbjct: 591 ETRRKKVISDWIEEM--NQFSNKIEEENQKKLAKKAFEQAYSSDDDENNSDFENEKDMEK 648
Query: 510 SYDSDKDQGDLDANPLMVPLDDGIRPTQEEITNKWFSQEIFAEAVQNGDLGKLGSEDETQ 569
D + N D I+ ++ +TN+WFS +F + V G+ + ++
Sbjct: 649 KSQKKNKVSDNNKNHESSDYKDEIK--KDILTNRWFSNSMFNDFV--GEEKDDQNTQDST 704
Query: 570 VDKQAEKHSIPE----------------KAKQKMANDAAG------PKST---------H 598
V K+ IP+ + K K +D+ PKST
Sbjct: 705 VIKELSDSEIPQIPLNEKKLKKLKNKKSQEKSKDNSDSKDNEIEFVPKSTGLIDMNDNIQ 764
Query: 599 NQVSEVEGDFEIVPAPGADSSDDSSSDESE--DEEVDTKAE-------ILACAKKMLRKK 649
++ D E V + +S++S +DE + D+E TK E I ++ K
Sbjct: 765 ESFNQNGSDDEDVVEQMSFNSENSDTDEVQESDDERFTKPENEEDLKIIQGIGSLLVNKS 824
Query: 650 QREQILDDAYNRYMFDDD---------GLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFK 700
R ++D +YNRY F D GLP WF+E+E +H + P+TKE +A +A+ +
Sbjct: 825 TRMDLIDGSYNRYAFHDPDEDLENNVLGLPSWFIEDENKHNKPELPITKELMAQYRAKLR 884
Query: 701 EIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPK 760
EI RP +K +EA ARKKR + +EK RKKA I+D ++++ SK K I L K A
Sbjct: 885 EIKNRPIRKESEALARKKRRYEKVMEKARKKAQSIADSEEMNEASKSKTINSLIKKAQKI 944
Query: 761 RPKKE---YVVAK------------KGVQVRAGKGKVLVDPRMKKDSR 793
KK Y V + K + K K VD R+KKD R
Sbjct: 945 SSKKRVNVYTVTRRHGLSKQIKNKEKSINTTNLKTK-FVDKRLKKDKR 991
>gi|312082095|ref|XP_003143302.1| hypothetical protein LOAG_07721 [Loa loa]
gi|307761535|gb|EFO20769.1| hypothetical protein LOAG_07721 [Loa loa]
Length = 602
Score = 288 bits (738), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 156/323 (48%), Positives = 208/323 (64%), Gaps = 13/323 (4%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R DKYY LAKE GYRSRA++KL+QL+ +F FL+ S AV+DLCAAPGGW+QVA Q +P
Sbjct: 8 GKQRRDKYYHLAKEAGYRSRAAFKLLQLNKRFEFLQKSRAVVDLCAAPGGWLQVATQNMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V SL +G+DLVPI PI V+L+ DIT + R V+K E G A D VLHDG+PN+G
Sbjct: 68 VSSLCIGVDLVPIKPINRCVTLQGDITAEKTRQMVRK--ELRGWEA-DCVLHDGAPNIGR 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
W Q+A QN L + ++KLATQ LA G FVTKVFRS DY ++ ++LF +V V KPA
Sbjct: 125 NWVQDAFQQNCLTLSALKLATQILAKNGIFVTKVFRSSDYHHLISVFEKLFRQVHVWKPA 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVE------PRKVVDVLRGTKQKRH 239
ASR SAEI+++ KY P K+ P LLD K +F S + P+ ++ R +K
Sbjct: 185 ASRLESAEIFVVCEKYLKPDKLSPDLLDPKKVFAESTQQSVTSNPQLMLQS-RIKLKKVP 243
Query: 240 RDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALC 299
GYE+ +L K+ ATDFI S++ LE+L S I D ++E TT+EVK
Sbjct: 244 AVGYENESISLHKIINATDFIQSSDYLELLASAYKIALDD---ERWLNNEETTDEVKCCL 300
Query: 300 DDLRVLGKQDFKHLLKWRMQIKK 322
+D++V G ++ + +LKWR I K
Sbjct: 301 EDVKVCGPRELRLILKWRRNIIK 323
>gi|294925458|ref|XP_002778927.1| ribosomal RNA methyltransferase, putative [Perkinsus marinus ATCC
50983]
gi|239887773|gb|EER10722.1| ribosomal RNA methyltransferase, putative [Perkinsus marinus ATCC
50983]
Length = 418
Score = 288 bits (737), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 164/403 (40%), Positives = 240/403 (59%), Gaps = 31/403 (7%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLD++Y+LAKE GYR+R+++KL+QL+ K+ FL+++ + +DLC APGGW QVAV+ +P
Sbjct: 8 GKERLDRFYQLAKEQGYRARSAFKLIQLEKKYGFLKNARSCVDLCGAPGGWSQVAVKHMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
S V+ +DL+PI PI+G V+++ DIT +CR + +++E D+VL+DG+PNVG
Sbjct: 68 ANSKVICVDLMPIKPIKGVVTMQCDITTQKCR---QFLLKELNGTPCDVVLNDGAPNVGA 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
+WA++A +Q L + +V LA L GTFVTKVFRS DY+S+L+ +QLFEKVE KP
Sbjct: 125 SWAKDAYNQAELCLYAVHLAADMLRKGGTFVTKVFRSSDYNSLLWVFQQLFEKVEATKPT 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ------------------------GS 221
ASR+ SAEI++ +KAPA++DPRL D K++F GS
Sbjct: 185 ASRNVSAEIFVTCKGFKAPARVDPRLFDPKWVFMMEGDEQEKAAVGEEDEEEITGKKAGS 244
Query: 222 VEPRKVVDVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPA 281
+ D L+ + KR R GYED ++ L + +FI S P E+L + + F
Sbjct: 245 SGAAALNDYLK-SAMKRRRGGYED-ESELFSTATVAEFIASPAPAEVLIKRSKLVFATED 302
Query: 282 CSAIKDHELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKK-AFSSAEKATVPASASAPT 340
C AI+ TT E+ DL+VLGK + LLKWRM+I+ EKA+ S
Sbjct: 303 CEAIRKSPYTTPEILDYMSDLKVLGKGELMALLKWRMRIRSLCVRDREKASKVDQESEGE 362
Query: 341 EGENEEDADNRVLNEM-EELKYAMDQRKKREKKLLAKKRAKDK 382
E E + A+ R + +EL + R++ EK L K+R + K
Sbjct: 363 EDEEDTLANARPGKSVDDELAALLSSRRREEKAELKKQRERTK 405
>gi|145354875|ref|XP_001421700.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581938|gb|ABO99993.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 376
Score = 288 bits (737), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 141/262 (53%), Positives = 193/262 (73%), Gaps = 3/262 (1%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
DKYY LAKE G+RSRA++KLVQL+ K+ FL + A +DLCAAPGGW+QVA + +P+ S +
Sbjct: 92 DKYYYLAKEQGFRSRAAFKLVQLNRKYDFLSKARACMDLCAAPGGWLQVAQKYMPMSSTI 151
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL PI PIRG +L +DIT CRA +K+V + G++ +D+V+HDG+PNVGG +A+E
Sbjct: 152 VGVDLAPIRPIRGVTTLVEDITTQSCRAALKRVTPQ-GLK-YDVVIHDGAPNVGGNFAKE 209
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ +Q AL +DS++LAT+FL P G FVTKVFRS +Y ++LY +QLF+KVE KP ASR
Sbjct: 210 SYTQAALTLDSLRLATEFLGPGGWFVTKVFRSVEYHALLYAFQQLFKKVESTKPVASRGT 269
Query: 191 SAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLR-GTKQKRHRDGYEDGDTT 249
SAEIY++ Y AP KIDPRLLD ++LF + + +DV + K+KR+R GYEDG +T
Sbjct: 270 SAEIYVVCSGYLAPTKIDPRLLDARHLFADTEAEIQPLDVTKDNGKRKRNRSGYEDGVST 329
Query: 250 LRKVSLATDFIWSNNPLEILGS 271
L K A +FI + P E+LGS
Sbjct: 330 LYKECTAEEFIVNEKPGEMLGS 351
>gi|254573574|ref|XP_002493896.1| AdoMet-dependent methyltransferase involved in rRNA processing and
60S ribosomal subunit maturation [Komagataella pastoris
GS115]
gi|238033695|emb|CAY71717.1| AdoMet-dependent methyltransferase involved in rRNA processing and
60S ribosomal subunit maturation [Komagataella pastoris
GS115]
gi|328354283|emb|CCA40680.1| hypothetical protein PP7435_Chr4-0516 [Komagataella pastoris CBS
7435]
Length = 828
Score = 288 bits (737), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 146/321 (45%), Positives = 207/321 (64%), Gaps = 9/321 (2%)
Query: 3 KVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGWMQVAV 61
K K RLD+YY LAKE GYR+R+S+KL+Q++ K+ FL S V+DLCAAPG W QVA
Sbjct: 7 KKNSKGRLDRYYYLAKEKGYRARSSFKLLQINEKYGHFLEKSRVVIDLCAAPGSWCQVAS 66
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
Q PV +L++G+D+V I P+ ++ + DIT +CR++++ M+ D VLHDG+P
Sbjct: 67 QVCPVNALIIGVDIVQIKPLPNCLTFQSDITTEDCRSKLRGHMKTWKA---DTVLHDGAP 123
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG W Q+A +Q+ L + ++KLA + L GTFVTK+FRS+DY+++++ +QLF+KVE
Sbjct: 124 NVGLGWVQDAFTQSQLTLQALKLAVENLGVGGTFVTKIFRSKDYNNLMWIFQQLFDKVEA 183
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRH 239
KP ASR+ SAEI+++ +KAP +IDPRLLD K +FQ S V K+ R
Sbjct: 184 TKPPASRNVSAEIFVVCKGFKAPKRIDPRLLDPKEVFQEVQSGAANNEAKVFNPHKKVRK 243
Query: 240 RDGYEDGDTTLRKVSLATDFIWSN-NPLEILGSVTSITFG--DPACSAIKDHELTTEEVK 296
R+GYE+ D K D++ + + ILG++ T DP +K E TT+E
Sbjct: 244 REGYEEEDYLQFKTLPLMDWVKQEVDVVNILGTLNQFTIDKEDPDWKQVKKMEQTTKEFL 303
Query: 297 ALCDDLRVLGKQDFKHLLKWR 317
C DL+VLGK+DFKHLLKWR
Sbjct: 304 ECCKDLKVLGKKDFKHLLKWR 324
>gi|294891100|ref|XP_002773420.1| ribosomal RNA methyltransferase, putative [Perkinsus marinus ATCC
50983]
gi|239878573|gb|EER05236.1| ribosomal RNA methyltransferase, putative [Perkinsus marinus ATCC
50983]
Length = 419
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 146/341 (42%), Positives = 212/341 (62%), Gaps = 29/341 (8%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLD++Y+LAKE GYR R+++KL+QL+ K+ FL+++ + +DLC APGGW QVA + +P
Sbjct: 8 GKERLDRFYQLAKEQGYRGRSAFKLIQLEKKYGFLKNARSCVDLCGAPGGWSQVAAKHMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
S V+ +DL+PI PI+G V+++ DIT +CR + +++E D+VL+DG+PNVG
Sbjct: 68 ANSKVICVDLMPIKPIKGVVTMQCDITTQKCR---QFLLKELNGTPCDVVLNDGAPNVGA 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
+WA++A +Q L + +V LA L GTFVTKVFRS DY+S+L+ +QLFEKVE KP
Sbjct: 125 SWAKDAYNQAELCLYAVHLAADMLRKGGTFVTKVFRSSDYNSLLWVFQQLFEKVEATKPT 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ------------------------GS 221
ASR+ SAEI++ +KAPA++DPRL D K++F GS
Sbjct: 185 ASRNVSAEIFVTCKGFKAPARVDPRLFDPKWVFMMEGDEQEKAAVGEEDEEEITGKKAGS 244
Query: 222 VEPRKVVDVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPA 281
+ D L+ + KR R GYED ++ L + +FI S P E+L + + F
Sbjct: 245 SGAAALNDYLK-SAMKRRRGGYED-ESELFSTATVAEFIASPAPAEVLIKRSKLVFATED 302
Query: 282 CSAIKDHELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKK 322
C AI+ TT E+ DL+VLGK + LLKWRM+I++
Sbjct: 303 CEAIRKSPYTTPEILDYMSDLKVLGKGELMALLKWRMRIRR 343
>gi|256079102|ref|XP_002575829.1| ribosomal RNA methyltransferase [Schistosoma mansoni]
gi|360044011|emb|CCD81557.1| putative ribosomal RNA methyltransferase [Schistosoma mansoni]
Length = 885
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 180/435 (41%), Positives = 267/435 (61%), Gaps = 35/435 (8%)
Query: 1 MGK-VK-GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQ 58
MGK +K GK R DK+Y LAKE G+RSRA++KL+QL+ +F FL SS ++DLCAAPGGW+Q
Sbjct: 1 MGKKIKTGKARKDKFYFLAKETGFRSRAAFKLIQLNRRFKFLNSSKVLIDLCAAPGGWLQ 60
Query: 59 VAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
VA + +P+ S ++G+DLVPI PI + DIT +C+ ++ E + ++A D+VLHD
Sbjct: 61 VAAKEMPMTSHIIGVDLVPIHPIPKVKTFVADITTDKCKQILRS--ELNDLKA-DVVLHD 117
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+PNVG AW+ + +Q L ++S +AT+FL G FVTKVFRS+DY + + L Q F
Sbjct: 118 GAPNVGAAWSIDEYTQAVLSLNSFAIATEFLRRGGWFVTKVFRSRDYEPLKWVLSQFFRT 177
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRK----VVDVLRGT 234
V KP ASR SAEI+L+G Y APA+IDP+ LD +++F G V+ K ++
Sbjct: 178 VRAIKPEASRLESAEIFLVGQNYIAPARIDPKFLDARHVF-GEVDAPKDRAALISSFLKE 236
Query: 235 KQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDP--ACSAIKDHELTT 292
+K+ +GY++GDT ++ L+ F+ S++PLE L + F P AC H LTT
Sbjct: 237 SRKKKAEGYDEGDTLYHELPLSK-FLESSDPLEALAKANKVIFDVPEIAC-----HPLTT 290
Query: 293 EEVKALCDDLRVLGKQDFKHLLKWRMQI--------KKAFSSAEKATVPASASAPTEGEN 344
+K +D++VLGK D K+LLKWRM+I K++ S E++ +P + GE+
Sbjct: 291 SLIKEDFNDIQVLGKGDIKNLLKWRMKILSVLKAESKESKDSIEESNLPKRDT----GED 346
Query: 345 EEDADNRVLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELF 404
EED + V E++ L ++ KK++ K + K++ K R M + + D ELF
Sbjct: 347 EEDLE--VETEVQRLWDEEEKLKKKKMKKVRKEKRKLAERYVLKMSHESDYIEQNDDELF 404
Query: 405 SLSSIKGKKDLAAVE 419
SL++I KDL +E
Sbjct: 405 SLAAI---KDLVGLE 416
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 148/314 (47%), Gaps = 40/314 (12%)
Query: 523 NPLMVPLDDGIRPTQEEITNK------WFS----QEIFAEAVQNGDLGKLGSEDETQVDK 572
NPL+V LDD EEI K WF QEI A ++ ++ + S +++ +
Sbjct: 575 NPLLVDLDDS-----EEIVKKKRKIDSWFGSDEIQEILAPLKEDENISMVMSSKKSKSNH 629
Query: 573 QAEKHSIPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSD-DSSSDESEDEE 631
+ +K ++K+ ND + Q + V EI P P S + S
Sbjct: 630 SSNTVVKEKKREKKIVNDEV----INLQDNCVSSSSEI-PIPKVSSEKLEKSLHRIRRLN 684
Query: 632 VDTKAEILACAKKMLRK-KQREQILDDAYNRYMFDDDG--LPDWFLEEERRHRQAIRPVT 688
AE A A +++ K R ++L+ YNRY F + LPDWF+E+E++H + V
Sbjct: 685 RPLTAEERAIATRLIHSAKSRRELLESGYNRYQFFEKSSDLPDWFIEDEKKHMRKPIIVK 744
Query: 689 KEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRK 748
KEEI R K +AKARKK ++L+++R+KA ISD+ I + K +
Sbjct: 745 KEEIPVDVPTM----GRSLSKAEQAKARKKARLAKRLKRIRQKAEGISDE--IPETEKWQ 798
Query: 749 QIEQLYKSA--VPKRPKKEYVVAKKGVQVRAGKGKV-------LVDPRMKKDSRTHGSGK 799
QI+QLYK A + ++ + +VV R+G K +VD RMK D R K
Sbjct: 799 QIKQLYKKAGLLKRKRRPLHVVVNTKAGSRSGGTKPQKGAKIKIVDKRMKADLRGQQKAK 858
Query: 800 -ARKGGSKKGNIGK 812
+K G +K +G+
Sbjct: 859 DGKKHGKRKNKVGR 872
>gi|443716141|gb|ELU07817.1| hypothetical protein CAPTEDRAFT_103272 [Capitella teleta]
Length = 317
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 143/308 (46%), Positives = 208/308 (67%), Gaps = 8/308 (2%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R DK+Y LAKE GYRSRA++KL+QL+ KF FL + +DLCAAPGGW+QVA Q++P
Sbjct: 8 GKARKDKFYHLAKETGYRSRAAFKLLQLNRKFEFLEKARVCIDLCAAPGGWLQVAAQQMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V S+++G+DL I PI VS ++DIT +CR ++K ++ D+VLHDG+PNVG
Sbjct: 68 VSSVIVGVDLFSIKPIHNVVSFQEDITTEKCRQTLRKELQTWKA---DVVLHDGAPNVGQ 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
W +A Q L + +++LA +FL G FVTK+FRS+DY+++L+ +QLF KV KP
Sbjct: 125 NWLHDAFQQAQLTLQALRLAVEFLRKGGWFVTKIFRSKDYNALLWVFQQLFGKVHATKPQ 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRHR--DGY 243
ASR+ SAEI+++ YKAP K+DP+ D KY+F+ P+K + L ++++ + +GY
Sbjct: 185 ASRNESAEIFVVCQNYKAPDKVDPKFTDPKYVFKDVEAPKKALLSLYHPEKEKKKKAEGY 244
Query: 244 EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLR 303
EDGD TL + TDFI ++N +E L + I F D +AIK H TT E+ A C+D++
Sbjct: 245 EDGDYTLHQKLTITDFIRADNYMERLAACNEIEFDD---AAIKAHPSTTPEILACCEDIK 301
Query: 304 VLGKQDFK 311
VLG++D +
Sbjct: 302 VLGRKDIR 309
>gi|308474701|ref|XP_003099571.1| hypothetical protein CRE_29065 [Caenorhabditis remanei]
gi|308266583|gb|EFP10536.1| hypothetical protein CRE_29065 [Caenorhabditis remanei]
Length = 784
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 157/337 (46%), Positives = 210/337 (62%), Gaps = 14/337 (4%)
Query: 1 MGK-VK-GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQ 58
MGK VK GK R DKYY+LAKE GYRSRA++KLVQL+ +F FL S A +DLCAAPGGWMQ
Sbjct: 1 MGKKVKIGKQRRDKYYKLAKEAGYRSRAAFKLVQLNKRFEFLEKSRATVDLCAAPGGWMQ 60
Query: 59 VAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
VA Q +PV SL++G+DL PI PI+ ++L+ DIT E RA +KK E + D VLHD
Sbjct: 61 VASQFMPVSSLIVGVDLAPIKPIKNCIALQGDITTNETRAAIKK---ELKTWSADCVLHD 117
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+PNVG W +A QN L + ++KLATQ L GTFVTKVFRS DYS ++ ++LF++
Sbjct: 118 GAPNVGLNWVHDAFQQNCLTLSALKLATQILRKGGTFVTKVFRSNDYSCLIRVFEKLFKR 177
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQG-----SVEPRKVVDVLRG 233
V V KPAASR SAEI+++ Y P K+ L+ K +F +P ++L G
Sbjct: 178 VHVWKPAASRLESAEIFVVCEVYLKPDKVGADFLNPKKVFANPDGSEGTKPNP-QNLLIG 236
Query: 234 TKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTE 293
++K +GY+ + ATDFI S L+ILG I D K+HE TTE
Sbjct: 237 KQKKAKAEGYDTDSLAVHSTIKATDFIKSPGYLDILGVANVILLDDEKW---KNHEKTTE 293
Query: 294 EVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKA 330
EV+ D++VLG ++ + LL+WR + + + KA
Sbjct: 294 EVEEYMKDVKVLGPRELRVLLRWRKSMLETIEAERKA 330
>gi|324504254|gb|ADY41837.1| RRNA methyltransferase 3 [Ascaris suum]
Length = 800
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 182/466 (39%), Positives = 268/466 (57%), Gaps = 23/466 (4%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R DK+Y LAKE GYRSRA++KL+QL+ +F FL+ S A++DLCAAPGGW+QVA Q +P
Sbjct: 8 GKQRKDKFYHLAKEAGYRSRAAFKLIQLNKRFEFLQKSRALIDLCAAPGGWLQVAAQNMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V S+ +G+DLVPI PI ++L+ DIT + R +KK ++ D VLHDG+PNVG
Sbjct: 68 VSSVRIGIDLVPIKPINSCITLQGDITTEKARQMIKKELQTWEA---DCVLHDGAPNVGL 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
W +A QN L + +++LATQ LA G FVTKVFRS DY S++ ++LF+KV V KPA
Sbjct: 125 NWLHDAFQQNCLTLSALRLATQVLAKNGCFVTKVFRSNDYHSLISVFEKLFKKVHVWKPA 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVD--VLRGTKQKRHR--- 240
ASR SAEI+++ KY PAK++ LLD + +F S K + ++ T++K +
Sbjct: 185 ASRLESAEIFVVCEKYLKPAKVNAELLDPRKVFSESKNETKPANPQLMLHTRRKEKKVKA 244
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
+GYE + L K A+ FI S + L++L I D + + TTEEV+ +
Sbjct: 245 EGYEGTELALYKAIPASQFIHSRDYLDLLSKTNKIVLDD---ERWEKNPATTEEVRHCIE 301
Query: 301 DLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDAD-------NRVL 353
D++V G ++ +H+L WR ++ ++ E+ E + D D R+
Sbjct: 302 DVKVCGPRELRHILLWRKKLLRSIEEEEEPGGETLDKEQMEVDEPPDPDAVEDEELARID 361
Query: 354 NEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELFSLSSIKGKK 413
E+ K K++KK + K++AK + RK M + T+ +LFSL S+ K
Sbjct: 362 EEIARAKAEDKATLKKKKKKMLKEKAKAQKRKQLKMVHEGDVQISTEQDLFSLKSVANAK 421
Query: 414 DLAAVEYDD---DDVNAAAEDSEDERPNRDTQEHV--SSDIDSDEE 454
LAAV D DD +E SEDE+ + E + +++ D DEE
Sbjct: 422 QLAAVMNDSATTDDPPDDSELSEDEKMDEGEWETIEGAAESDGDEE 467
>gi|145551003|ref|XP_001461179.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429012|emb|CAK93806.1| unnamed protein product [Paramecium tetraurelia]
Length = 902
Score = 285 bits (729), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 143/331 (43%), Positives = 206/331 (62%), Gaps = 17/331 (5%)
Query: 3 KVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQ 62
K K + RLDKYY LAK+ GYRSRA++KL QL+ K++FL ++ V+DLCAAPGGWMQV Q
Sbjct: 4 KTKARSRLDKYYNLAKDQGYRSRAAFKLFQLNRKYNFLNNARTVVDLCAAPGGWMQVCAQ 63
Query: 63 RVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPN 122
+P S+++GLDLV I PI G + QDIT P+C +KK + + D+ LHDG+PN
Sbjct: 64 IMPTSSIIIGLDLVHIKPIPGCKAFTQDITTPQCVQLLKKEIPQKA----DVFLHDGAPN 119
Query: 123 VGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVD 182
VG +WA++A +QN LV+ +++LA+QFL G FVTKVFRS DY+S+++ + F KVE
Sbjct: 120 VGASWAKDAYNQNDLVLSALRLASQFLKKGGVFVTKVFRSTDYNSLMWVFNKFFSKVEAT 179
Query: 183 KPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQK----- 237
KP ASR SAEI+++ + Y AP ID +L D K++F+ + D+L+ QK
Sbjct: 180 KPLASRFVSAEIFVVCLDYLAPEYIDEKLFDSKHVFKDT-----ETDMLQQQIQKEIVSR 234
Query: 238 --RHRDGY-EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEE 294
RHR GY +D T+ ++ +F+ + NP I I + A ++
Sbjct: 235 TQRHRSGYADDVHQTVYQMIDFEEFLHAENPYPIFIEYAGIKMTEEAKQKYLGLAKPPQD 294
Query: 295 VKALCDDLRVLGKQDFKHLLKWRMQIKKAFS 325
+ L +D++VLGK++ LLKWR +IK S
Sbjct: 295 YEILMEDIKVLGKREIIQLLKWRSKIKHFLS 325
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 119/196 (60%), Gaps = 7/196 (3%)
Query: 628 EDEEVDTKAEILACAKKMLRKKQREQILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPV 687
ED ++D A LA AKKM+RKK REQI+++++ R ++D LP WF+++E RH + P+
Sbjct: 704 EDYDIDQLASNLALAKKMMRKKTREQIIENSFGRDKWEDQDLPQWFVDDEERHVFKMEPI 763
Query: 688 TKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKR 747
TKEE K + EI++R KK+ EAK RK + A +KL+ KKA + D I+ ++K
Sbjct: 764 TKEEFQQEKQRLYEINSRVPKKIMEAKIRKWKKAQKKLKTAAKKAQTVFDTDGINQKTKM 823
Query: 748 KQIEQLY---KSAVPKRPKKEYVVAKKGV---QVRAGKGKVLVDPRMKKDSRTHGSGKAR 801
+Q+ ++Y K+ + K +++ +VA+KG + ++ + + VD R+KKD R KAR
Sbjct: 824 QQVRRIYNKEKANIQKEQERKVIVARKGQASGKFKSSRKVLTVDKRLKKDKRAM-KAKAR 882
Query: 802 KGGSKKGNIGKARKGK 817
G KK RKGK
Sbjct: 883 VGKGKKRRQVSRRKGK 898
>gi|145550654|ref|XP_001461005.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428837|emb|CAK93608.1| unnamed protein product [Paramecium tetraurelia]
Length = 954
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 143/331 (43%), Positives = 205/331 (61%), Gaps = 17/331 (5%)
Query: 3 KVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQ 62
K K + RLDKYY LAK+ GYRSRA++KL QL+ K++FL ++ V+DLCAAPGGWMQV Q
Sbjct: 56 KTKARSRLDKYYNLAKDQGYRSRAAFKLFQLNRKYNFLNNARTVVDLCAAPGGWMQVCAQ 115
Query: 63 RVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPN 122
+P S ++GLDLV I PI G + QDIT P+C +KK + + D+ LHDG+PN
Sbjct: 116 IMPTSSTIIGLDLVHIKPIPGCKAFTQDITTPQCVQLLKKEIPQKA----DVFLHDGAPN 171
Query: 123 VGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVD 182
VG +WA++A +QN LV+ +++LA+QFL G FVTKVFRS DY+S+++ + F KVE
Sbjct: 172 VGASWAKDAYNQNDLVLSALRLASQFLKKGGVFVTKVFRSTDYNSLMWVFNKFFSKVEAT 231
Query: 183 KPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQK----- 237
KP ASR SAEI+++ + Y AP ID +L D K++F+ + D+L+ QK
Sbjct: 232 KPLASRFVSAEIFVVCLDYLAPEYIDEKLFDSKHVFKDT-----ETDMLQQQIQKEIVSR 286
Query: 238 --RHRDGY-EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEE 294
RHR GY +D T+ ++ +F+ + NP I I + A ++
Sbjct: 287 TQRHRSGYADDVHQTVYQMINFEEFLHAENPYPIFIEYAGIKMTEEAKQKYLSLAKPPQD 346
Query: 295 VKALCDDLRVLGKQDFKHLLKWRMQIKKAFS 325
+ L +D++VLGK++ LLKWR +IK S
Sbjct: 347 YEILMEDIKVLGKREIIQLLKWRSKIKHFIS 377
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 138/243 (56%), Gaps = 15/243 (6%)
Query: 581 EKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILA 640
EK ++K+ AA + Q SE + P + S + ED ++D A LA
Sbjct: 717 EKRRRKLKKIAAREEKKAKQASEKD--------PNHKELEIVSEKKIEDYDIDQLATNLA 768
Query: 641 CAKKMLRKKQREQILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFK 700
AKKM+RKK REQI+++++ R ++D LP WF+++E RH + P+TKEE K +
Sbjct: 769 LAKKMMRKKTREQIIENSFGRDKWEDADLPQWFVDDEERHVFKMEPITKEEFQQEKQRLY 828
Query: 701 EIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLY---KSA 757
EI++R KK+ EAK RK + A +KL+ KKA + D I++++K +Q+ ++Y K+
Sbjct: 829 EINSRVPKKIMEAKIRKWKKAQKKLKTAAKKAQTVFDTDGINEKTKMQQVRRIYNKEKAN 888
Query: 758 VPKRPKKEYVVAKKGV---QVRAGKGKVLVDPRMKKDSRTHGSGKARKGGSKKGNIGKAR 814
+ K +++ +VA+KG ++++ + + VD R+KKD R KAR G KK R
Sbjct: 889 IQKEQERKVIVARKGQASGKLKSSRKVLTVDKRLKKDKRAM-KAKARVGKGKKRRQVSRR 947
Query: 815 KGK 817
KGK
Sbjct: 948 KGK 950
>gi|209883044|ref|XP_002142954.1| rRNA (uridine-2'-O-)-methyltransferase 3 [Cryptosporidium muris
RN66]
gi|209558560|gb|EEA08605.1| rRNA (uridine-2'-O-)-methyltransferase 3, putative [Cryptosporidium
muris RN66]
Length = 920
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 207/342 (60%), Gaps = 31/342 (9%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLD+YY LAKE GYR+R+++KL+QL K+ ++ ++DLCAAPGGW+QVA + +
Sbjct: 8 GKDRLDRYYHLAKEQGYRARSAFKLIQLAQKYDIFKNCQVLVDLCAAPGGWLQVAKRHMG 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V S ++G+DLV I I G + + DIT +C+ + +E V D+VLHDG+PNVG
Sbjct: 68 VSSKIIGVDLVSIKSIPGVTTFKCDITTEQCKKLILNNLEGLSV---DVVLHDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
+W ++A QN LV+ S KLA L P G F+TK+FRS DY+S+++ L QLF+ V KP
Sbjct: 125 SWNRDAYIQNELVVHSTKLACDILRPGGIFITKIFRSSDYNSLIWVLNQLFKTVRATKPQ 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGS-------------VEPRKV---VD 229
+SR+ SAEI+L+ + YKAP KID + D K++F S V+ +KV +
Sbjct: 185 SSRNVSAEIFLVCLDYKAPHKIDSKFFDPKFIFTNSNDINESQELRLAEVQTKKVKPGLS 244
Query: 230 VLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGD---------P 280
L + KR+RDGYE+ D R +SL DF +S NP +IL I
Sbjct: 245 ELMKSIGKRNRDGYEEDD--FRIISLF-DFFYSENPAQILLKSQKIRLSPIDNDNTEKRE 301
Query: 281 ACSAIKDHELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKK 322
+ +++ T EE+K LCDDL+VLGK + LLKWR + K
Sbjct: 302 FIKLVLNNKRTNEEIKILCDDLKVLGKNELMQLLKWRFLVLK 343
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 92/178 (51%), Gaps = 24/178 (13%)
Query: 640 ACAKKMLRKKQREQILDDAYNRYMFDDD-------GLPDWFLEEERRHRQAIRPVTKEEI 692
A ++ K R ++D +YNRY F D GLP WF+E+E +H + PVTKE +
Sbjct: 723 AIGSLLVNKSTRMDLIDGSYNRYSFHDPIEDGKTLGLPSWFVEDEMKHNKPELPVTKELM 782
Query: 693 AAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQ 752
A KA+ +EI R +K EA RKKR + L+K R+KA I++ ++++ SK K I+
Sbjct: 783 AQYKAKIREISRRTIRKEVEALYRKKRRQEKLLQKARQKALAIAESEEMNETSKSKVIQN 842
Query: 753 LYKS----AVPKRPKKEYVVAKKGV--QVRAGKGKVL-----------VDPRMKKDSR 793
L K A KR V + G+ +V KGK + VD R+KKD R
Sbjct: 843 LMKRAKSIANSKRSTVYTVTRRHGITKEVNNKKGKNIKGYMKNVKTKFVDKRLKKDKR 900
>gi|260809478|ref|XP_002599532.1| hypothetical protein BRAFLDRAFT_279878 [Branchiostoma floridae]
gi|229284812|gb|EEN55544.1| hypothetical protein BRAFLDRAFT_279878 [Branchiostoma floridae]
Length = 321
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 145/324 (44%), Positives = 216/324 (66%), Gaps = 21/324 (6%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
G+HR DK+Y+LAKE GYR+R+++KL+QL+ K+ FL+ S ++DLCAAPGGW+QVA + +P
Sbjct: 8 GQHRKDKFYKLAKETGYRARSAFKLIQLNRKYGFLQRSKVLVDLCAAPGGWLQVAAKYMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V SL++G+DLVPI PI +++ DIT +CR ++K E D VLHDG+PNVG
Sbjct: 68 VSSLLVGIDLVPIKPIPNVSTIQADITTDKCRQALRK---ELATWQADCVLHDGAPNVGS 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
W ++A Q LV+ +++LAT+ L+ G FVTKVFRS+DY ++L+ +QLF+ V KP
Sbjct: 125 NWLKDASEQAQLVLAALRLATEVLSKGGCFVTKVFRSKDYHALLWVFQQLFKLVHATKPQ 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDV-------LRGTKQKR 238
ASR SAEI+++ + AP KIDPR LD ++ F K VDV L+ +QK+
Sbjct: 185 ASRHESAEIFVVCEGFIAPDKIDPRFLDPRFAF-------KEVDVGQTPQVNLKMLEQKK 237
Query: 239 HR-DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKA 297
+ +GY DGD TL + ++FI S++ +++L S + F D I +H LTT E+K
Sbjct: 238 AKAEGYADGDLTLFHKANVSEFITSDSYMDMLASKNELFFDD---EKIANHPLTTSEIKL 294
Query: 298 LCDDLRVLGKQDFKHLLKWRMQIK 321
C D+++LG++D + LL+WR ++K
Sbjct: 295 CCQDIKLLGRKDIRLLLRWRKKMK 318
>gi|169641976|gb|AAI60685.1| LOC431876 protein [Xenopus laevis]
Length = 852
Score = 282 bits (722), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 143/346 (41%), Positives = 216/346 (62%), Gaps = 8/346 (2%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
GKV GK R DK+Y LAKE GYRSR+++KL+QL+ KF FL+ + A++DLCAAPGGW+QVA
Sbjct: 5 GKV-GKSRKDKFYHLAKETGYRSRSAFKLIQLNRKFQFLQRARALVDLCAAPGGWLQVAA 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ +PV SL++G+DLVPI PI ++L++DIT +CR VKK ++ D+VL+DG+P
Sbjct: 64 KFMPVSSLIIGIDLVPIKPIPNVLTLQEDITTEDCRQAVKKHLQTWKA---DVVLNDGAP 120
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG W +A SQ L + +++LA L+ G F+TK+FRS DY S+L+ L+Q F+KV
Sbjct: 121 NVGANWTHDAFSQVHLSLMALRLACDCLSRGGWFITKIFRSSDYQSLLWILQQFFKKVNS 180
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRHRD 241
KP ASRS SAEI+++ + AP KID R D K+ F+ P + V L K+ + +
Sbjct: 181 TKPQASRSESAEIFVVCQGFLAPDKIDTRFFDPKFAFKDVDGPVQTVSQLLSHKKPKA-E 239
Query: 242 GYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDD 301
GY +L + DF+ NP++ L + I D + ++ H TT +++ C D
Sbjct: 240 GYAATSLSLYHCASLVDFLTVENPVDFLSKTSEIALDD---TELEKHPATTNDIRECCRD 296
Query: 302 LRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEED 347
++VLG+++ + LL WR ++++ + K SA +EE+
Sbjct: 297 IKVLGRKELRLLLNWRSKLRRHLARKLKEASKESAMEIILSSDEEE 342
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 105/158 (66%), Gaps = 10/158 (6%)
Query: 648 KKQREQILDDAYNRYMFDDDG--LPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDAR 705
KK ++D ++NR F+DD LPDWF+ EER+HR PV + + + + +E++AR
Sbjct: 689 KKSTRDLIDGSFNRRNFNDDEDELPDWFVSEERKHRIVQVPVDRHMMEDYRKRQRELNAR 748
Query: 706 PAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAV--PKRPK 763
P KKVAEAKARKKR ++K+E+++KKA + + +DIS+R K Q+ +Y+ V ++P+
Sbjct: 749 PIKKVAEAKARKKRRTLKKMEQMKKKAEAVVNTSDISEREKAAQLRSIYRKGVLGKEKPQ 808
Query: 764 KEYVVAKKGV--QVR--AG-KGKV-LVDPRMKKDSRTH 795
Y+VAKKGV +VR AG KG +VD RMKKD R+
Sbjct: 809 VTYLVAKKGVGRKVRRPAGIKGHFKVVDGRMKKDMRSQ 846
>gi|156402433|ref|XP_001639595.1| predicted protein [Nematostella vectensis]
gi|156226724|gb|EDO47532.1| predicted protein [Nematostella vectensis]
Length = 306
Score = 281 bits (719), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 140/306 (45%), Positives = 205/306 (66%), Gaps = 7/306 (2%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R DK+Y LAKE GYR+R+++KL+QL+ KF FL+ S ++DLCAAPGGW+QVA + +P
Sbjct: 8 GKRRKDKFYHLAKETGYRARSAFKLIQLNRKFGFLQKSRCLIDLCAAPGGWLQVASKFMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
+ S+++G+DLVPI PI+ ++ +DIT C+ +KK ++ D VL+DG+PNVG
Sbjct: 68 MSSIIVGVDLVPIKPIKNVITFTEDITTERCKQLLKKELKTWKA---DCVLNDGAPNVGT 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A +Q L + ++KLA + L G F+TKVFRS+DY +L+ +QLF+ V KP
Sbjct: 125 AWVQDAFTQAELTLSALKLACENLKEGGWFITKVFRSKDYQPLLWVFQQLFKSVHSTKPQ 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRHRDGYED 245
ASR+ SAEI+++ Y AP+KIDP++LD K++FQ + L K+KR +GY++
Sbjct: 185 ASRNESAEIFVVCQGYIAPSKIDPKMLDPKFVFQEVQQLDLKKPTLLNEKKKRA-EGYKE 243
Query: 246 GDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLRVL 305
D TL + A++FI S +PLE+L I F D I +H LTTE++K C D++VL
Sbjct: 244 CDYTLHTKTPASEFIQSESPLELLTETNEIVFDD---DKILNHTLTTEDIKECCRDIKVL 300
Query: 306 GKQDFK 311
GK D +
Sbjct: 301 GKPDVR 306
>gi|401396511|ref|XP_003879839.1| putative ftsJ-like methyltransferase domain-containing protein
[Neospora caninum Liverpool]
gi|325114247|emb|CBZ49804.1| putative ftsJ-like methyltransferase domain-containing protein
[Neospora caninum Liverpool]
Length = 988
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 154/367 (41%), Positives = 220/367 (59%), Gaps = 48/367 (13%)
Query: 3 KVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGWMQVAV 61
K KGK RLDK+Y LAKE GYR+R+++KL+QL +F+ F ++ V+DLCAAPGGW+QVA
Sbjct: 9 KKKGKERLDKFYHLAKEQGYRARSAFKLLQLSQRFNLFQKNCSRVVDLCAAPGGWLQVAA 68
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ PV S ++G+DLVPI PIRG + DIT C A+++K+++ V DLVLHDGSP
Sbjct: 69 KHCPVASTIVGVDLVPIQPIRGVETFTGDITTAACAAKLRKLVKFGEV---DLVLHDGSP 125
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
N+G W+ +A +QN LV+ + +LA Q LA TFV+KVFRS DY+++LY L+ LF++V+
Sbjct: 126 NMGTDWSVDAFNQNVLVLSAARLACQLLAAGATFVSKVFRSGDYAALLYVLQTLFDRVDA 185
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF------QGSVEPRKVV------- 228
KP ASR+ SAEI+++ +K PA +D RL D KY+F G +K +
Sbjct: 186 TKPQASRAVSAEIFVVCRGFKKPAVLDERLFDPKYVFLQAEDETGEQPSKKALKDEEGGE 245
Query: 229 ----------DVLRGTK--------------QKRHRDGYEDGDTTLRKVSLATDFIWSNN 264
+ GTK KRHR+G D LR++S+ +F S +
Sbjct: 246 AAEGESDEEEGIFFGTKGGKKGQFAELVRRRAKRHRNG--DILAGLRRISV-DEFFRSKD 302
Query: 265 PLEIL-GSVTSITFGD---PACSAIKDHELTTEEVKALCDDLRVLGKQDFKHLLKWRMQI 320
P +L I F D P A++ H LTT+E++ D++VLGK + +LKWR ++
Sbjct: 303 PTTLLVEQAREIFFQDGALPLEEAVRAHRLTTQEIRDCLTDVQVLGKAELAAILKWRFRV 362
Query: 321 KKAFSSA 327
KK S A
Sbjct: 363 KKEISVA 369
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 103/174 (59%), Gaps = 13/174 (7%)
Query: 633 DTKAEILACAKKMLRKKQREQILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEI 692
D AEI A +++K R ++D AYNR+ F+DD LP+WF E+E+ H + PVTKE +
Sbjct: 793 DEVAEIQALGSLLVQKSARMDLIDGAYNRFAFNDDALPEWFEEDEKVHLRPELPVTKELM 852
Query: 693 AAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQ 752
+ + +I RP +KV EA+ARKK R+L+KV+ +A +++ + ++ +K + I++
Sbjct: 853 REYRQKLLDISRRPIRKVQEARARKKLREKRRLQKVKSQAAAVAESTEFTEAAKARAIDK 912
Query: 753 LYKSA--VPKRPKKEYVVAK-----KGVQVRAGK-----GKV-LVDPRMKKDSR 793
+ + A + K+YVV + K Q +AGK +V LVD R+KKD R
Sbjct: 913 IARQARRADGKRGKDYVVTRRVGGGKLAQKKAGKKGDGNNRVKLVDRRLKKDKR 966
>gi|115528317|gb|AAI24923.1| LOC431876 protein [Xenopus laevis]
Length = 762
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 143/346 (41%), Positives = 216/346 (62%), Gaps = 8/346 (2%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
GKV GK R DK+Y LAKE GYRSR+++KL+QL+ KF FL+ + A++DLCAAPGGW+QVA
Sbjct: 5 GKV-GKSRKDKFYHLAKETGYRSRSAFKLIQLNRKFQFLQRARALVDLCAAPGGWLQVAA 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ +PV SL++G+DLVPI PI ++L++DIT +CR VKK ++ D+VL+DG+P
Sbjct: 64 KFMPVSSLIIGIDLVPIKPIPNVLTLQEDITTEDCRQAVKKHLQTWKA---DVVLNDGAP 120
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG W +A SQ L + +++LA L+ G F+TK+FRS DY S+L+ L+Q F+KV
Sbjct: 121 NVGANWTHDAFSQVHLSLMALRLACDCLSRGGWFITKIFRSSDYQSLLWILQQFFKKVNS 180
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRHRD 241
KP ASRS SAEI+++ + AP KID R D K+ F+ P + V L K+ + +
Sbjct: 181 TKPQASRSESAEIFVVCQGFLAPDKIDTRFFDPKFAFKDVDGPVQTVSQLLSHKKPKA-E 239
Query: 242 GYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDD 301
GY +L + DF+ NP++ L + I D + ++ H TT +++ C D
Sbjct: 240 GYAATSLSLYHCASLVDFLTVENPVDFLSKTSEIALDD---TELEKHPATTNDIRECCRD 296
Query: 302 LRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEED 347
++VLG+++ + LL WR ++++ + K SA +EE+
Sbjct: 297 IKVLGRKELRLLLNWRSKLRRHLARKLKEASKESAMEIILSSDEEE 342
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 648 KKQREQILDDAYNRYMFDDDG--LPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDAR 705
KK ++D ++NR F+DD LPDWF+ EER+HR PV + + + + +E++AR
Sbjct: 689 KKSTRDLIDGSFNRRNFNDDEDELPDWFVSEERKHRIVQVPVDRHMMEDYRKRQRELNAR 748
Query: 706 P 706
P
Sbjct: 749 P 749
>gi|388581260|gb|EIM21569.1| FtsJ-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 842
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 150/405 (37%), Positives = 236/405 (58%), Gaps = 19/405 (4%)
Query: 16 LAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDL 75
+AK+ GYRSRA +KL +L+ +F+F+ S +DL AAPG W+Q +P GSL++G+DL
Sbjct: 1 MAKDRGYRSRAFFKLAELNKRFNFIEKSRIAVDLGAAPGSWLQNLSSSMPHGSLIIGVDL 60
Query: 76 VPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQN 135
VPIAPI + D+T C+ + M+ + DLV+HDG+PNVG AW Q+A +QN
Sbjct: 61 VPIAPIPRVTTFVADLTTQHCKQLITNEMKGNLA---DLVVHDGAPNVGSAWLQDAFAQN 117
Query: 136 ALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASAEIY 195
LV+ S+K+A + L GTFVTKVFRS+DY+++++ QLF V KP +SR SAE++
Sbjct: 118 ELVLASLKIAAEILEKGGTFVTKVFRSKDYNNLMWVFNQLFRNVSATKPNSSRLVSAELF 177
Query: 196 LLGIKYKAPAKIDPRLLDVKYLF-----------QGSVEPRKVVDVLRGTKQKRHRDGYE 244
++ + AP K+DPR LD KY+F +GSV +V +++R R+GYE
Sbjct: 178 VVCQDFIAPQKLDPRFLDPKYVFKDIAALATDTGKGSVHANAHANVFMPEQKRRKREGYE 237
Query: 245 DGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLRV 304
+G+ T K A +FI +P+ +LG+ +ITF + +E TT+++ A C+DL+V
Sbjct: 238 EGNYTQYKEVSAMEFIEGTDPVTLLGTHNAITFKTKEDKKLLKNEDTTKDILANCEDLKV 297
Query: 305 LGKQDFKHLLKWRMQIKKAFS-SAEKATVPASASAPTEGENEEDADNRVLNEMEELKYAM 363
LGK++FK L+KWR+ I++ K E + D ++ ++E ++
Sbjct: 298 LGKKEFKQLMKWRIIIREEMGLEVRKKDKKEDIDESNIEELPVNPDEQIAEDIERIENED 357
Query: 364 DQRKKREKKLLAKKRAKDKARKATGM----QIDVMQDDYTDHELF 404
R K+E++ +KR K+ R M I + QD + D +++
Sbjct: 358 SARAKKERRRKNEKRTKEVQRMQLKMGAPIDIGLEQDQHLDDDVY 402
>gi|449016958|dbj|BAM80360.1| probable rRNA methyltransferase pmt2 [Cyanidioschyzon merolae
strain 10D]
Length = 848
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 236/775 (30%), Positives = 352/775 (45%), Gaps = 128/775 (16%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFL-RSSHAVLDLCAAPGGWMQVAVQRV 64
GKHRLD+YY LAKEHGYRSRA++KL+QL+ + FL R+S V+DLCAAPGGWMQV Q +
Sbjct: 8 GKHRLDRYYHLAKEHGYRSRAAFKLLQLNRRHGFLGRASRGVVDLCAAPGGWMQVCRQHM 67
Query: 65 PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGV------------RAF 112
PV + +G+DLVPIAPIR ++ DIT +C ++ + G
Sbjct: 68 PVAAPCIGVDLVPIAPIRNCTTIVADITSEKCVRLIRNALTSFGEVLDPSGRVATGDLGV 127
Query: 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCL 172
D+VL D SPN+G AW Q+A +Q L + ++++A+ L G FV+K+FRS D + L
Sbjct: 128 DVVLSDASPNMGTAWLQDAYNQVELTLHALRIASTLLQRGGWFVSKLFRSADSEAFLLVA 187
Query: 173 KQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLR 232
++LF++V V KP ASR SAEIY++ Y APA+++ L D + +F+ S V +
Sbjct: 188 RRLFQRVYVTKPPASRQQSAEIYVVCKSYLAPARLEANLFDPRQVFRESTSHANAVADVA 247
Query: 233 GTKQKRHRDGYE-------------------------DGDTTLRKVSLATDFIWSNNPLE 267
R R + +G T R SL T F+ S+ P
Sbjct: 248 SPDDARQRQQLQSKDRKFRRQLLSGRRSAVPDDVEAINGTTKYRTCSLRT-FLESSFPGI 306
Query: 268 ILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSA 327
+L + SI + L E++ALC DL V G +DF+ L K+ ++ A
Sbjct: 307 VLSTHNSIEIIEEDALPEPVRLLVNAEIRALCKDLGVCGPKDFRRLFKFWETSRRVLFCA 366
Query: 328 EKATVPASASAPTEGENEEDADNRVLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKA- 386
EK+ A ++ P G +EE +R M REK+L AK A+++ARK
Sbjct: 367 EKSQKQAGSTVPESGVSEEPMVDR-----SAASSTMASTTGREKRLEAKA-ARERARKLE 420
Query: 387 ----TGMQIDV---MQDDYTDHELFSLSSIKGKKDLAAV-EYDDDDVNAAAEDSEDERPN 438
G +D + +D LFSL + E + + ++A DSE +
Sbjct: 421 RQRQRGAHLDANANVDEDTGFSNLFSLREARAAMQTGYFEEVETSALESSALDSEQD--G 478
Query: 439 RDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENYVAKRGGSTMQRKRAKKAYAQEDQLS 498
D E SD D+Q TM + Q+ ++
Sbjct: 479 ADASEESGSDAAGAHSESFVDDQ-------------------TMSSD--DDGHGQDASVN 517
Query: 499 EGDEDEDTMHTSYDSDKDQGDLDANPLMVPLDDGIRPTQEEI-TNKWFSQEIFAEAVQNG 557
++ + + D D D +A L++ D I PTQ + +W
Sbjct: 518 LNMSADEPIQSDSDVDLDNEIQNAQQLVLEDDPNI-PTQLKAGAQRW------------- 563
Query: 558 DLGKLG--SEDETQVDKQAE--KHSIPEKAKQKMANDAA--------------------- 592
L +LG S D Q+ A+ + S+ E M DA
Sbjct: 564 -LHRLGIRSLDALQIPDAADLLQASVLEAENASMLTDAHLSDSSTSSSSSTSSSEPAEGH 622
Query: 593 -----GPKSTHNQ-VSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKK-M 645
P +TH+Q S V + I G +++ + DE T+AE+ A+ M
Sbjct: 623 GYLGNTPAATHDQHQSTVTREDAISADAGTNTNKIRQLLGTMDER--TRAELRTIARHYM 680
Query: 646 LRKKQREQILDDAYNRYMFDD-DGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQF 699
LR+ RE ++D Y+R+ FDD + LP WFL +E+R R+A + V E+ A AQ
Sbjct: 681 LRRSGREALIDSTYHRHAFDDPESLPQWFLADEQRARKAPQIVDPAEVDAAIAQL 735
>gi|403355179|gb|EJY77159.1| Putative rRNA methyltransferase 3 [Oxytricha trifallax]
Length = 860
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 145/363 (39%), Positives = 222/363 (61%), Gaps = 18/363 (4%)
Query: 1 MG--KVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQ 58
MG K K K RLDK+Y +AKEHG+RSRA++KL+QL+ K+ FL +S ++DLCAAPGGW+Q
Sbjct: 1 MGNKKQKNKARLDKFYYMAKEHGFRSRAAFKLIQLNKKYDFLSTSKCLVDLCAAPGGWLQ 60
Query: 59 VAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
VA + +PV S+ +G+DL PI I+G V+ +DIT C +KK ++ D+VL+D
Sbjct: 61 VAAKYMPVASIKIGVDLTPIKAIKGCVTFTEDITSARCLQLIKKELKHFKA---DVVLND 117
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+PNVG WA++A +Q L + ++KLAT+ L GTF+TKVFRS+DY+S+LY QLF K
Sbjct: 118 GAPNVGADWAKDAYNQAELCLFALKLATEVLRRGGTFITKVFRSKDYNSLLYVFNQLFNK 177
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTK--- 235
VE KP ASR+ SAEI+++ +KAP IDP+ LD KY + + + + K
Sbjct: 178 VEATKPQASRTQSAEIFVVCQGFKAPDVIDPKFLDPKYALEEVEDEEDAANQISSLKKLL 237
Query: 236 -QKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEE 294
+K +R GYE+ +L + + +F+ S +P L + D + I + ++
Sbjct: 238 EKKNNRGGYEENLGSLYQETNFIEFLESTDPYVFLSTYNKFKIDDKS-KEIFLKQAPPQD 296
Query: 295 VKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPA--------SASAPTEGENEE 346
++ +C+DL+V G+++ +LK+R + + A +A+K A + PTE E EE
Sbjct: 297 LEIICEDLKVCGRRELFSILKYRNKYQTAIEAAKKKERQAKNDQHARDNKREPTEAELEE 356
Query: 347 DAD 349
+
Sbjct: 357 QTN 359
>gi|399218629|emb|CCF75516.1| unnamed protein product [Babesia microti strain RI]
Length = 1059
Score = 279 bits (713), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 149/348 (42%), Positives = 223/348 (64%), Gaps = 19/348 (5%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
K RLDKYY LAKE GYR+R+++KL+Q+ +++ R + ++DLCAAPGGW+QVA +P
Sbjct: 8 AKSRLDKYYNLAKEQGYRARSAYKLIQISKRYNIFRDCNTLIDLCAAPGGWLQVASDTMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
+ SL++G+DLVPI PI+ ++L+ DIT + + K M +G +A D++LHDGSPN+G
Sbjct: 68 INSLIIGVDLVPIKPIKNVITLQLDITSQYAKHTLLKRM--NGAKA-DVILHDGSPNMGS 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
W +A +QN LV+ + LA L GT+VTKVFRS DYSS+++ ++LF V+ KP
Sbjct: 125 NWNLDAFNQNQLVLSATNLACNLLRKGGTYVTKVFRSADYSSLIWVFQELFHIVKATKPQ 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQG-SVEP----------RKVVDVLRGT 234
+SR SAEI+++ ++YK+P +DP+L D K++F+ + P K + L
Sbjct: 185 SSRIVSAEIFVICMRYKSPQFLDPKLFDFKHVFKNRGLNPDQKLTEDSDKSKSLSHLLKL 244
Query: 235 KQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACS-AIKDHELTTE 293
K++ R GY DGD R+VS+ D++ S+NP +IL + I F + S I++H LTT+
Sbjct: 245 KERNKRQGYSDGD-DYREVSI-IDYLKSDNPSDILVNYNRIRFIESETSDIIRNHPLTTQ 302
Query: 294 EVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVP-ASASAPT 340
E+ L DL+VLGK+D LLKWRM++ K +K +P A PT
Sbjct: 303 EILTLFSDLQVLGKKDLLLLLKWRMRLLKCIKD-DKLPIPELLAKLPT 349
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 102/177 (57%), Gaps = 14/177 (7%)
Query: 645 MLRKKQREQILDDAYNRYMFDDD--GLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEI 702
++ KK R ++D YNRY +++D LP WF E+E H + P+TKE++ + + KEI
Sbjct: 778 LISKKSRLDLMDGMYNRYAYNEDIEDLPLWFREDEEMHTKVQLPLTKEQMRVYRMKLKEI 837
Query: 703 DARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADIS----DRSKRKQIEQLYKSAV 758
+ P +KV EA +R+ + KL+KVR IS++ D+S +K + ++ K AV
Sbjct: 838 KSLPIRKVKEAISRRMKKIQNKLDKVRTDTERISNRNDVSIVHQIEKNKKILRKVAKDAV 897
Query: 759 PKRPKKEYVVAKK--GVQVRAGK--GKVL--VDPRMKKDSRT-HGSGKARKGGSKKG 808
K+ K YVV+ K VR+GK G+V+ VD RMKKD+R + K RK G KG
Sbjct: 898 GKK-NKVYVVSNKFGNNSVRSGKKSGEVIKFVDKRMKKDNRNAKKTRKVRKTGRHKG 953
>gi|308159656|gb|EFO62181.1| FtsJ cell division protein, putative [Giardia lamblia P15]
Length = 1084
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 154/401 (38%), Positives = 222/401 (55%), Gaps = 73/401 (18%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK+R D+YYRLA+E GYRSRA++KL+QLD+++ FL S+ ++DLCAAPG W QVA ++P
Sbjct: 9 GKNRKDEYYRLAREAGYRSRAAYKLIQLDAQYGFLSSTKCLIDLCAAPGSWSQVAAMKMP 68
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
VGSL++ +DL PI PI G VS DIT CR + + ++ V D V+HDG+PN+G
Sbjct: 69 VGSLIVSVDLDPIKPINGVVSFCSDITTAACRNALTEKLKGWAV---DTVIHDGAPNMGT 125
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW +A QN LV+ + KLAT+FL GTF+TK+FRS D+ ++LY L+QLFEKVE+ KP
Sbjct: 126 AWGVDAFGQNTLVLAACKLATEFLRMHGTFITKIFRSADHDALLYVLRQLFEKVEITKPR 185
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVD-------VLRGTKQ-- 236
ASR S+E + + ++YK P +ID RL D ++F+ ++ D LR + +
Sbjct: 186 ASRDNSSECFAVCLRYKNPKEIDGRLFDPNHVFKNYTGIQQQFDKESMYNTALRSSNKTN 245
Query: 237 -------------KRHRDGY--EDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF---- 277
RHR GY E G ++ + DF+ +P+ +L + I+F
Sbjct: 246 SSLKQLAEDLSHTTRHRTGYSEERGGGLYMQIPV-LDFLMHPSPIALLAKYSVISFDKGV 304
Query: 278 -GDPACSAI----------KD-------------------------HELTTEEVKALCDD 301
G+P + KD H TT+E+K C D
Sbjct: 305 KGNPKFQHLYGDIKKGEQMKDPNIKFNHRVVDNWDEYTRLQHEVMAHVATTDEIKYCCQD 364
Query: 302 LRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASA--SAPT 340
+R + +DF+ LLKWR +K + + TVP SAPT
Sbjct: 365 IRNMNNKDFRKLLKWR---EKVIAHICEITVPVEMPKSAPT 402
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 113/211 (53%), Gaps = 28/211 (13%)
Query: 639 LACAKKMLRKKQREQILDDAYNRYMF----DDDGLPDWFLEEERRHRQAIRPVTKEEIAA 694
LA +KM KK +E I+ + NR+ F D LP WF+++E R+ + P+T EEI
Sbjct: 882 LALVQKMTTKKGKEAIIHSSINRFSFYRDEDPRTLPRWFVDDEERNCKPEVPLTAEEIQL 941
Query: 695 MKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLY 754
KA+ + ++ARP KKV EA ARK+ A +L+++ KA+ ++ + DIS+R K I L
Sbjct: 942 QKARVEALNARPIKKVREALARKRMRAYSRLKQLTTKADTLAARTDISEREK---ITILE 998
Query: 755 KSAV-----PKRPKKEYVVA---KKGVQVRAG----KGKVLVDPRMKKDSRTHGSGKARK 802
K+A + KK +++ K G AG +G VD RMKKD RK
Sbjct: 999 KAAAKMHRRESKTKKRVIISNRNKVGALSSAGRRDKRGVKHVDRRMKKD--------LRK 1050
Query: 803 GGSKKGNIG-KARKGKGSVKASSKKGKKGNK 832
G + +G IG KA K +G V A+ K K K
Sbjct: 1051 GHAFEGGIGKKAMKKQGLVNAALGKFKAKQK 1081
>gi|123476534|ref|XP_001321439.1| FtsJ-like methyltransferase family protein [Trichomonas vaginalis
G3]
gi|121904265|gb|EAY09216.1| FtsJ-like methyltransferase family protein [Trichomonas vaginalis
G3]
Length = 738
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 143/322 (44%), Positives = 208/322 (64%), Gaps = 13/322 (4%)
Query: 2 GKVKG-KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
GK + KHRLDKYY LA++ GYRSRA++KL+QL+ +F+FL +H LDLCAAPGGW QVA
Sbjct: 4 GKTRAYKHRLDKYYHLARQVGYRSRAAFKLIQLNQQFNFLNDAHVCLDLCAAPGGWSQVA 63
Query: 61 VQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
+ +PVG+ ++ +DL PI I ++L+ DI P+ RV+K+++ G +A D+VL+DG+
Sbjct: 64 AKYMPVGAQIIAIDLAPIKDIPRVIALQGDILLPKTHQRVRKLIQ--GQKA-DVVLNDGA 120
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
PNVG AW ++ +Q L + SVK +T FL G+FVTKVFRS+ Y+S+L+ L Q FEKV
Sbjct: 121 PNVGAAWVTDSSNQLELCLASVKFSTLFLRKGGSFVTKVFRSEHYNSLLWVLSQFFEKVV 180
Query: 181 VDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRHR 240
KP ASR +SAE++++ + YKAP +D RLLD Y+F E V G + K
Sbjct: 181 PTKPKASRDSSAELFVVALGYKAPDVVDQRLLDPTYVFSDLDELIAKHAVPSGVETKMTS 240
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFG-DPACSAIKDHELTTEEVKALC 299
Y +T+ ++++ + PL+IL + + FG DP A +H TT E+K L
Sbjct: 241 IDY----STIS----VSEYLRAEKPLDILTTANKLVFGDDPVSQAALNHPQTTNEIKTLL 292
Query: 300 DDLRVLGKQDFKHLLKWRMQIK 321
DL+++G D K LLKWR +++
Sbjct: 293 SDLKLVGFSDRKVLLKWRNKLR 314
>gi|339244263|ref|XP_003378057.1| putative ribosomal RNA large subunit methyltransferase J
[Trichinella spiralis]
gi|316973066|gb|EFV56698.1| putative ribosomal RNA large subunit methyltransferase J
[Trichinella spiralis]
Length = 633
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 156/360 (43%), Positives = 224/360 (62%), Gaps = 22/360 (6%)
Query: 1 MGKVK-GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQV 59
MGK K GK R DKYY LAK+ GYRSRA++KLV L+ KF FL S ++DLCAAPGGW+QV
Sbjct: 1 MGKKKVGKQRRDKYYNLAKQAGYRSRAAFKLVHLNKKFQFLEKSTCLVDLCAAPGGWLQV 60
Query: 60 AVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDG 119
A Q +PV L++G+DLV I + ++L+ DIT C +++K+ E D VLHDG
Sbjct: 61 ASQYMPVSRLIIGVDLVSIKALHNVITLQNDITTESCLSQIKR---ELKTWTADCVLHDG 117
Query: 120 SPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF--- 176
SPNVG W +A Q L + +++LA+ L P G FVTK+FRS+D+ +++ +K+LF
Sbjct: 118 SPNVGKNWNHDAFQQAQLTLHALRLASAILRPGGWFVTKLFRSKDHPTLVNVMKKLFNKV 177
Query: 177 ----EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL-LDVKYLF-QGSVEPRKV-VD 229
+KV V KP ASR SAEIY + +K PA D + L K +F + +EP+K ++
Sbjct: 178 KLAGKKVHVTKPQASRQESAEIYAVCQGFK-PA--DSTVSLSFKSVFKELDLEPQKTKIN 234
Query: 230 VLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHE 289
+ R KQKR +GY +G TL A +FI S++ LEILG + DP I DH
Sbjct: 235 LFRPEKQKRKAEGYAEGCDTLYNRVSAGEFITSSDYLEILGGANQLLLDDP---KIADHP 291
Query: 290 LTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDAD 349
T++E+K LC+D++VLG+++ + L+ WR +++ F AE T+ + A E NE D++
Sbjct: 292 ATSDEIKQLCEDVKVLGRRELRQLISWRRKLRSDF-KAESETLKRQSDANLEN-NEMDSE 349
Score = 47.4 bits (111), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 637 EILACAKKMLRK-KQREQILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTK-EEIAA 694
E LA A+ + K R ++D +NR++ +D LP WF E+E++H P+TK +++
Sbjct: 509 EGLALAQMWIHSTKTRRNLIDAGFNRFVNNDTNLPAWFAEDEKKHYHPNLPITKRQKLEK 568
Query: 695 MKAQFKEIDARPAKKVAEAKARKKRVAMR 723
+ +K+ P K+V A+K V R
Sbjct: 569 GEKIYKQSKQAPKKEVTYVVAKKGLVGKR 597
Score = 39.3 bits (90), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 10/62 (16%)
Query: 741 ISDRSKRKQIEQLYKSAVPKRPKKE--YVVAKKGV---QVRAGKGKV----LVDPRMKKD 791
I+ R K ++ E++YK + + PKKE YVVAKKG+ + R +G +VDPRMKKD
Sbjct: 560 ITKRQKLEKGEKIYKQS-KQAPKKEVTYVVAKKGLVGKRTRRPQGVTGRYKMVDPRMKKD 618
Query: 792 SR 793
SR
Sbjct: 619 SR 620
>gi|47124733|gb|AAH70677.1| LOC431876 protein, partial [Xenopus laevis]
Length = 346
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 143/346 (41%), Positives = 216/346 (62%), Gaps = 8/346 (2%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
GKV GK R DK+Y LAKE GYRSR+++KL+QL+ KF FL+ + A++DLCAAPGGW+QVA
Sbjct: 5 GKV-GKSRKDKFYHLAKETGYRSRSAFKLIQLNRKFQFLQRARALVDLCAAPGGWLQVAA 63
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ +PV SL++G+DLVPI PI ++L++DIT +CR VKK ++ D+VL+DG+P
Sbjct: 64 KFMPVSSLIIGIDLVPIKPIPNVLTLQEDITTEDCRQAVKKHLQTWKA---DVVLNDGAP 120
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
NVG W +A SQ L + +++LA L+ G F+TK+FRS DY S+L+ L+Q F+KV
Sbjct: 121 NVGANWTHDAFSQVHLSLMALRLACDCLSRGGWFITKIFRSSDYQSLLWILQQFFKKVNS 180
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRHRD 241
KP ASRS SAEI+++ + AP KID R D K+ F+ P + V L K+ + +
Sbjct: 181 TKPQASRSESAEIFVVCQGFLAPDKIDTRFFDPKFAFKDVDGPVQTVSQLLSHKKPK-AE 239
Query: 242 GYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDD 301
GY +L + DF+ NP++ L + I D + ++ H TT +++ C D
Sbjct: 240 GYAATSLSLYHCASLVDFLTVENPVDFLSKTSEIALDD---TELEKHPATTNDIRECCRD 296
Query: 302 LRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEED 347
++VLG+++ + LL WR ++++ + K SA +EE+
Sbjct: 297 IKVLGRKELRLLLNWRSKLRRHLARKLKEASKESAMEIILSSDEEE 342
>gi|159115593|ref|XP_001708019.1| FtsJ cell division protein, putative [Giardia lamblia ATCC 50803]
gi|157436128|gb|EDO80345.1| FtsJ cell division protein, putative [Giardia lamblia ATCC 50803]
Length = 1084
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 171/483 (35%), Positives = 256/483 (53%), Gaps = 89/483 (18%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK+R D+YYRLA+E GYRSRA++KL+QLD+++ FL S+ ++DLCAAPG W QVA ++P
Sbjct: 9 GKNRKDEYYRLAREAGYRSRAAYKLIQLDAQYGFLSSTKCLIDLCAAPGSWSQVAAMKMP 68
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
VGSL++ +DL PI PI G VS DIT CR + + ++ V D V+HDG+PN+G
Sbjct: 69 VGSLIVSVDLDPIKPINGVVSFCSDITTAACRNALTEKLKGWAV---DTVIHDGAPNMGT 125
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW +A QN LV+ + KLAT+FL GTF+TK+FRS D+ ++LY L+QLFEKVE+ KP
Sbjct: 126 AWGVDAFGQNTLVLAACKLATEFLRMHGTFITKIFRSADHDALLYVLRQLFEKVEITKPR 185
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVD-------VLRG----- 233
ASR S+E + + ++YK P +ID R D ++F+ ++ D LR
Sbjct: 186 ASRDNSSECFAVCLRYKNPKEIDGRFFDPNHVFKNYTGIQQQSDKESMYNAALRSSSKTS 245
Query: 234 ----------TKQKRHRDGYED--GDTTLRKVSLATDFIWSNNPLEILGSVTSITF---- 277
+ RHR GY D G ++ + DF+ +P+ +L + I+F
Sbjct: 246 SSLKQLAEDLSHTARHRTGYSDERGGGLYMQIPV-LDFLMHPSPITLLAKYSVISFDKDV 304
Query: 278 -GDPACS----------AIKD-------------------------HELTTEEVKALCDD 301
G+P +KD H TT+E+K C D
Sbjct: 305 KGNPKFQHLYGDIKRGEQVKDPSIKFNHRVVDTWDEYTRLQHEVMAHVATTDEIKYCCQD 364
Query: 302 LRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASA--SAPT----EGENEEDADNRVLNE 355
+R + +DF+ LLKWR +K + + TVP SAPT E +D +
Sbjct: 365 VRNMNNKDFRKLLKWR---EKVIAHICEITVPVEIPKSAPTLEQLEALPAYSSDEFLQLT 421
Query: 356 MEELKYAMDQ--------RKKREKKLLAKKRAKDKARKA-TGMQIDVM---QDDYTDHEL 403
E+ + +Q +++RE + +K AKD+AR+ + Q+D + D T +L
Sbjct: 422 PEQQAHLQEQYLQREKLRKERRELQRAERKMAKDQARQLKSKSQVDDLAETADSVTLRKL 481
Query: 404 FSL 406
F++
Sbjct: 482 FTM 484
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 113/211 (53%), Gaps = 28/211 (13%)
Query: 639 LACAKKMLRKKQREQILDDAYNRYMF----DDDGLPDWFLEEERRHRQAIRPVTKEEIAA 694
LA +KM KK +E I+ + NR+ F D LP WF+++E R+ + P+T EEI
Sbjct: 882 LALVQKMTTKKGKEAIIHSSINRFSFYRDEDPRTLPRWFVDDEERNCKPEVPLTAEEIQL 941
Query: 695 MKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLY 754
+A+ + ++ARP KKV EA ARK+ A +L+++ KA+ ++ + DIS+R K + L
Sbjct: 942 QRARVEALNARPIKKVREALARKRMRAYSRLKQLTTKADTLAARTDISEREK---VTILE 998
Query: 755 KSAV-----PKRPKKEYVVA---KKGVQVRAG----KGKVLVDPRMKKDSRTHGSGKARK 802
K+A + KK +++ K G AG +G +D RMKKD RK
Sbjct: 999 KAAAKMHRRESKTKKRVILSNRNKVGALSSAGRRDKRGVKHIDRRMKKD--------LRK 1050
Query: 803 GGSKKGNIG-KARKGKGSVKASSKKGKKGNK 832
G + +G +G KA K +G V A+ K K K
Sbjct: 1051 GHAFEGGVGKKAMKKQGLVNAALGKFKAKQK 1081
>gi|401424577|ref|XP_003876774.1| putative FtsJ cell division protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493017|emb|CBZ28302.1| putative FtsJ cell division protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 925
Score = 272 bits (695), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 144/348 (41%), Positives = 214/348 (61%), Gaps = 11/348 (3%)
Query: 3 KVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQ 62
K K K RLD YYRLAK+ GYR+R+++KL+QL+ K+ FL S ++DLCAAPGGW QVA Q
Sbjct: 6 KKKAKTRLDAYYRLAKDQGYRARSAYKLIQLNRKYDFLAKSRVLVDLCAAPGGWCQVAAQ 65
Query: 63 RVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPN 122
+ +GS ++G+DLVPIAPIRG + DIT + R + +++ V D V+HDG+PN
Sbjct: 66 HMAIGSKIVGVDLVPIAPIRGVKTFVGDITDDKTRKMIVTYLKKEPV---DCVIHDGAPN 122
Query: 123 VGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVD 182
VGG W+++ QNALV+ S K+A L G FVTKVFRS D+ ++L+ KQLFEKVE
Sbjct: 123 VGGVWSRDLFDQNALVLASAKMACSMLKAGGWFVTKVFRSPDFHNLLWVFKQLFEKVEAT 182
Query: 183 KPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDV--LRGTKQKRHR 240
KP ASR SAEI+++ +KAP IDP + + +F V K+V + T +
Sbjct: 183 KPQASRMESAEIFVVCAGFKAPKSIDPAFFNPQKVF-AEVGQEKIVSASGMLVTPKSNVP 241
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
GY++ T V+ +DF+ +++P L + + F D A + + +E+ LC
Sbjct: 242 TGYDEFATVSHHVASFSDFLNADDPKVFLKTHHELRFSDDADKEYLKSKSSKKELVYLCG 301
Query: 301 DLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDA 348
DL+ +G+ D + +L+WR Q+ + EKA +A+A TE +++ D+
Sbjct: 302 DLQQVGEADLRRMLRWREQLLR-----EKAHRIQAAAAGTEEDDDVDS 344
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 97/172 (56%), Gaps = 22/172 (12%)
Query: 558 DLGKLGSEDET-QVDKQA--EKHSIPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAP 614
D+GK+ +++ Q KQ + + ++ K+ N +G S Q +E FE +P
Sbjct: 711 DIGKVTTQELIRQQRKQTLQDNKEVRKQNKRNKNNTNSGKNSNGKQDTE----FEEIPIA 766
Query: 615 GADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQREQILDDAYNRYMF-DDDGLPDWF 673
D D +A LA A+KML K R +ILD + NRY+F DDD LPDWF
Sbjct: 767 MTDP--------------DIRARTLAIAQKMLDPKARREILDASVNRYVFNDDDDLPDWF 812
Query: 674 LEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKL 725
+++E+R+ + + PVT EEI + +F+E++ARP++KV EA RK+R A R L
Sbjct: 813 VKDEQRNCRVVLPVTAEEIEEQRRRFQELNARPSRKVMEAMGRKRRKAQRML 864
>gi|198424890|ref|XP_002122891.1| PREDICTED: similar to Putative rRNA methyltransferase 3 (rRNA
(uridine-2-O-)-methyltransferase 3) [Ciona intestinalis]
Length = 744
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 140/327 (42%), Positives = 210/327 (64%), Gaps = 12/327 (3%)
Query: 1 MGKVK--GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQ 58
MGK K K R DKYY LAKE GYR+R+++KL+QL+ KF+FL+SS A +DLCAAPGGW+Q
Sbjct: 1 MGKKKQVAKARKDKYYHLAKETGYRARSAFKLLQLNKKFNFLQSSQACVDLCAAPGGWLQ 60
Query: 59 VAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
VA + +P+ S+++G+DLVPI P+ V+ + DITK CR ++++ + + V F LHD
Sbjct: 61 VASEHMPMSSIIVGVDLVPIRPVPKCVTFQDDITKESCRTQLRRELHKWKVDCF---LHD 117
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+PNVG W +A SQ+ L + ++KLA++FL G F+TKVFRS+DY ++++ QLF K
Sbjct: 118 GAPNVGKNWLHDAYSQSVLTLAALKLASEFLCKGGWFITKVFRSKDYQALMWIFGQLFNK 177
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ---GSVEPRKVVDVLRGTK 235
V KP ASR+ SAEI+++ +K+P KID + D K +FQ P ++D K
Sbjct: 178 VHATKPQASRNVSAEIFVVCQGFKSPDKIDKKFFDPKSVFQEVEAKTRPVNILDFEPKKK 237
Query: 236 QKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEV 295
+K G E D K ++ ++F+ + P+++L ++ I F D K H L T+E+
Sbjct: 238 KKAKGYGDEAKDLLYMKKTV-SEFLGCSQPMQMLSEISEIVFED---DDQKVHPLVTDEI 293
Query: 296 KALCDDLRVLGKQDFKHLLKWRMQIKK 322
K D++ LGK++ K LLKW + +K
Sbjct: 294 KEHVKDIKRLGKKEIKTLLKWHKKWQK 320
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 102/163 (62%), Gaps = 16/163 (9%)
Query: 649 KQREQILDDAYNRYMFDDD--GLPDWFLEEERRH--RQAIRP-VTKEEIAAMKAQFKEID 703
K++ ++DD++NRY F+D+ LPDWFLE+E++ + +R V+K+ + ++ K I+
Sbjct: 564 KRKRDVIDDSFNRYTFNDEECALPDWFLEDEKKRVVKNHLRHHVSKDMMDFYGSKDKGIN 623
Query: 704 ARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPK 763
R KKV EAKARKKR A +K+EK RK+A ISD AD+S + K I+ +YK A + K
Sbjct: 624 VRTIKKVVEAKARKKRKATKKMEKARKQAEGISDTADMSTKEKAAHIKNIYKKAGLLKKK 683
Query: 764 KE---YVVAKKGVQVR-------AGKGKVLVDPRMKKDSRTHG 796
KE YV AK+G R +GK KV VD RMKKD R G
Sbjct: 684 KENTTYVFAKRGTGKRVRRPPGVSGKFKV-VDKRMKKDLRPQG 725
>gi|389593507|ref|XP_003722007.1| putative FtsJ cell division protein [Leishmania major strain
Friedlin]
gi|321438509|emb|CBZ12268.1| putative FtsJ cell division protein [Leishmania major strain
Friedlin]
Length = 924
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 137/320 (42%), Positives = 199/320 (62%), Gaps = 6/320 (1%)
Query: 3 KVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQ 62
K K K RLD YYRLAK+ GYR+R+++KL+QL+ K+ FL S ++DLCAAPGGW QVA Q
Sbjct: 6 KKKAKTRLDAYYRLAKDQGYRARSAYKLIQLNRKYDFLAKSRVLVDLCAAPGGWCQVAAQ 65
Query: 63 RVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPN 122
+ +GS ++G+DLVPIAPIRG + DIT + R + +++ V D V+HDG+PN
Sbjct: 66 HMAIGSKIVGVDLVPIAPIRGVKTFVGDITDDKTRKMIVTYLKKEPV---DCVIHDGAPN 122
Query: 123 VGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVD 182
VGG W+++ QNALV+ S K+A L G FVTKVFRS D+ ++L+ KQLFEKVE
Sbjct: 123 VGGVWSRDLFDQNALVLASAKMACSMLKANGWFVTKVFRSPDFHNLLWVFKQLFEKVEAT 182
Query: 183 KPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDV--LRGTKQKRHR 240
KP ASR SAEI+++ +KAP IDP + + +F V K+V + T +
Sbjct: 183 KPQASRMESAEIFVVCAGFKAPKNIDPAFFNPQKVF-AEVGQEKIVSASGMLVTPKSNVP 241
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
GYE+ T V+ +DF+ +++P L + + F D A + + +E+ LC
Sbjct: 242 TGYEEFATVSHHVASFSDFLNADDPKGFLKTHHELRFSDDADKEYLTSKSSKKELVYLCG 301
Query: 301 DLRVLGKQDFKHLLKWRMQI 320
DL+ +G+ D + +L+WR Q+
Sbjct: 302 DLQQVGEADLRRMLRWREQL 321
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 97/171 (56%), Gaps = 20/171 (11%)
Query: 558 DLGKLGSEDETQVDKQAEKHSIPEKAKQKMAN--DAAGPKSTHNQVSEVEGDFEIVPAPG 615
D+GK+ ++ ++ +Q K ++ + + + N + S N + + +FE +P
Sbjct: 710 DIGKVTTQ---ELIRQQRKQTLCDNKEVRKQNKRNKNNANSGRNSSGKQDTEFEEIPIAM 766
Query: 616 ADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQREQILDDAYNRYMF-DDDGLPDWFL 674
D D +A LA A+KML K R +ILD + NRY+F DDD LPDWF+
Sbjct: 767 TDP--------------DIRARTLAIAQKMLDPKARREILDASVNRYVFNDDDDLPDWFV 812
Query: 675 EEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKL 725
++E+R+ + + PVT EEI + +F+E++ARP++KV EA RK+R A R L
Sbjct: 813 KDEQRNCRVVLPVTAEEIEEQRRRFRELNARPSRKVMEAMGRKRRKAQRML 863
>gi|342180038|emb|CCC89514.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 929
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 137/321 (42%), Positives = 203/321 (63%), Gaps = 8/321 (2%)
Query: 3 KVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQ 62
K K K RLD YYRLAK+ G+R+R+++KLVQL+ K+ FL ++DLCAAPG W QVA +
Sbjct: 6 KKKAKTRLDAYYRLAKDQGFRARSAFKLVQLNRKYDFLAKCRVLVDLCAAPGSWCQVAAK 65
Query: 63 RVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPN 122
+PVGS ++G+DLVPIAPIRG + DIT + R + ++ V D V+HDG+PN
Sbjct: 66 HMPVGSKIVGVDLVPIAPIRGVKTFVGDITDEKTRKIIMTYLKREPV---DCVIHDGAPN 122
Query: 123 VGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVD 182
VGG W+++ QN+LV+ + K+A++ L G FVTKVFRSQD+ +++ +KQLFEKVE
Sbjct: 123 VGGVWSRDLFEQNSLVLHAAKMASKLLRLGGWFVTKVFRSQDFHKLMWVMKQLFEKVEAT 182
Query: 183 KPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGT---KQKRH 239
KP ASR SAEI+++ YKAP ++DP + + + +F VE K++ GT +
Sbjct: 183 KPLASRMESAEIFVVCAGYKAPKQLDPSMFNAQKVF-SDVEEEKIL-TPSGTLVVPKSNV 240
Query: 240 RDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALC 299
GY++ T V+ +DF+ S++P L S + F P A+ + + +E+ LC
Sbjct: 241 PVGYDEFATIQHHVAAFSDFMQSSDPKTFLRSHHELRFTTPEEKALLKSKHSKKELVYLC 300
Query: 300 DDLRVLGKQDFKHLLKWRMQI 320
DL+ +G D K L++WR Q+
Sbjct: 301 GDLQQVGDADLKRLIRWREQL 321
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 103/190 (54%), Gaps = 36/190 (18%)
Query: 558 DLGKLGSEDETQVDKQAEKHSIPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGAD 617
D+GKL ++ ++ +Q + ++ E A+++ G + + +FE +P D
Sbjct: 724 DIGKLTTQ---EIVRQQRRQTLKENAEKRRQKGGKG--------TSKDTEFEEIPVALTD 772
Query: 618 SSDDSSSDESEDEEVDTKAEILACAKKMLRKKQREQILDDAYNRYMF-DDDGLPDWFLEE 676
+ +A LA A +ML + R +ILD + NRY F DDD LPDWF+ +
Sbjct: 773 P--------------EIRARTLAIATRMLDPRSRREILDASINRYTFNDDDDLPDWFIRD 818
Query: 677 ERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLE---------- 726
E+R+ + I PVT EE+ A +A+F+E++ARP+KKV EA RK+R A R L
Sbjct: 819 EQRNCRVILPVTAEEVEAQRARFREMNARPSKKVMEAVNRKRRRAQRMLRGLIERGKVDP 878
Query: 727 KVRKKANVIS 736
+ R+KAN +S
Sbjct: 879 RTREKANNLS 888
>gi|343472393|emb|CCD15434.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 904
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 137/321 (42%), Positives = 203/321 (63%), Gaps = 8/321 (2%)
Query: 3 KVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQ 62
K K K RLD YYRLAK+ G+R+R+++KLVQL+ K+ FL ++DLCAAPG W QVA +
Sbjct: 6 KKKAKTRLDAYYRLAKDQGFRARSAFKLVQLNRKYDFLAKCRVLVDLCAAPGSWCQVAAK 65
Query: 63 RVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPN 122
+PVGS ++G+DLVPIAPIRG + DIT + R + ++ V D V+HDG+PN
Sbjct: 66 HMPVGSKIVGVDLVPIAPIRGVKTFVGDITDEKTRKIIMTYLKREPV---DCVIHDGAPN 122
Query: 123 VGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVD 182
VGG W+++ QN+LV+ + K+A++ L G FVTKVFRSQD+ +++ +KQLFEKVE
Sbjct: 123 VGGVWSRDLFEQNSLVLHAAKMASKLLRLGGWFVTKVFRSQDFHKLMWVMKQLFEKVEAT 182
Query: 183 KPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGT---KQKRH 239
KP ASR SAEI+++ YKAP ++DP + + + +F VE K++ GT +
Sbjct: 183 KPLASRMESAEIFVVCAGYKAPKQLDPSMFNAQKVF-SDVEEEKIL-TPSGTLVVPKSNV 240
Query: 240 RDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALC 299
GY++ T V+ +DF+ S++P L S + F P A+ + + +E+ LC
Sbjct: 241 PVGYDEFATIQHHVAAFSDFMQSSDPKTFLRSHHELRFTTPEEKALLKSKHSKKELVYLC 300
Query: 300 DDLRVLGKQDFKHLLKWRMQI 320
DL+ +G D K L++WR Q+
Sbjct: 301 GDLQQVGDADLKRLIRWREQL 321
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 103/190 (54%), Gaps = 36/190 (18%)
Query: 558 DLGKLGSEDETQVDKQAEKHSIPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGAD 617
D+GKL ++ ++ +Q + ++ E A+++ G + + +FE +P D
Sbjct: 699 DIGKLTTQ---EIVRQQRRQTLKENAEKRRQKGGKG--------TSKDTEFEEIPVALTD 747
Query: 618 SSDDSSSDESEDEEVDTKAEILACAKKMLRKKQREQILDDAYNRYMF-DDDGLPDWFLEE 676
+ +A LA A +ML + R +ILD + NRY F DDD LPDWF+ +
Sbjct: 748 P--------------EIRARTLAIATRMLDPRSRREILDASINRYTFNDDDDLPDWFIRD 793
Query: 677 ERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLE---------- 726
E+R+ + I PVT EE+ A +A+F+E++ARP+KKV EA RK+R A R L
Sbjct: 794 EQRNCRVILPVTAEEVEAQRARFREMNARPSKKVMEAVNRKRRRAQRMLRGLIERGKVDP 853
Query: 727 KVRKKANVIS 736
+ R+KAN +S
Sbjct: 854 RTREKANNLS 863
>gi|389584507|dbj|GAB67239.1| FtsJ-like methyltransferase [Plasmodium cynomolgi strain B]
Length = 1010
Score = 268 bits (686), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 137/351 (39%), Positives = 221/351 (62%), Gaps = 30/351 (8%)
Query: 1 MGKVK--GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQ 58
MGK K GK R+DKYY+LAK GYR+R+++KL+Q+ K++ + ++ ++DLCAAPGGW+Q
Sbjct: 1 MGKKKKVGKERIDKYYKLAKSAGYRARSAFKLIQIAQKYNIFKDANILIDLCAAPGGWLQ 60
Query: 59 VAVQRVPVGSLVLGLDLVPIAPI-RGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117
VA + + S ++G+DLVPI I ++L+ DIT C ++K +++ D++L+
Sbjct: 61 VAYKNMKRSSTIIGVDLVPIRKIDNNVITLKCDITTSACIKQIKNIIKNEKA---DVILN 117
Query: 118 DGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFE 177
DG+PNVG ++ ++ +QN LV++S+K+A FL +G F TKVFR+++Y S+++ +++LF
Sbjct: 118 DGAPNVGTTYSYDSFNQNVLVLNSIKIANLFLKKRGIFTTKVFRNEEYVSLIWVMEKLFG 177
Query: 178 KVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF--QGSVEPRKVV------- 228
+V+ KP +SR S+EIYL+G+ + K+D +L D Y+F Q E KVV
Sbjct: 178 QVKHVKPRSSREISSEIYLIGLNF-LSTKVDKKLFDYTYVFSEQFKQESNKVVTNNDSDN 236
Query: 229 DVLRGT-KQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFG-------DP 280
D+ + K+K++R GY+ GD +V+ +FI S+N +++L TF DP
Sbjct: 237 DIFTDSKKKKKNRQGYDLGDDY--RVTDICNFIHSDNYVDLLIKTNKFTFDKDYLTSEDP 294
Query: 281 AC----SAIKDHELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSA 327
+AI + TT+E+ LC DL+VLGK D HL+KWR +++K S
Sbjct: 295 LVRSTYTAIYKNTSTTQEILQLCKDLKVLGKSDLFHLIKWRYKVRKGIVSV 345
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 107/219 (48%), Gaps = 14/219 (6%)
Query: 557 GDLGKLGSEDETQVDKQAEKHSIPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPA--P 614
GD K DE +Q +P K +K N K +N+V F IV
Sbjct: 739 GDDEKFNELDE----RQLPNIPLPNKLARKERNKKLREKYGNNEVKMKNTTFSIVKTDES 794
Query: 615 GADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQREQILDDAYNR--YMFDDDGLPDW 672
G + S+ +DE D A I +K++ KK R ++DD++NR Y+ D+D LP+W
Sbjct: 795 GQGNVGTYFSNLIKDE--DELAFIKCIGEKLIHKKSRMDLIDDSFNRHSYLEDEDTLPEW 852
Query: 673 FLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKA 732
F+EEE++ R+ + P+ K + K+ +I P KKV EAK R K+ + K++K+ K
Sbjct: 853 FVEEEKKFRRPVIPIDKSILNQYKSSINKITKMPIKKVIEAKMRNKKREIAKMKKLEAKI 912
Query: 733 NVIS-DQADISDRSKRKQIEQ-LYKSAVPKRPKKEYVVA 769
I D+ D K K I L K+ K+ +K YVV
Sbjct: 913 GKIEKDEED--PFLKHKAITNILKKNKSEKKREKSYVVC 949
>gi|340052440|emb|CCC46720.1| putative FtsJ cell division protein [Trypanosoma vivax Y486]
Length = 914
Score = 268 bits (686), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 133/320 (41%), Positives = 199/320 (62%), Gaps = 6/320 (1%)
Query: 3 KVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQ 62
K K K RLD YYRLAK+ G+R+R+++KL+QL+ K+ FL ++DLCAAPG W QVA +
Sbjct: 6 KKKAKTRLDAYYRLAKDQGFRARSAFKLIQLNRKYDFLAKCRVLVDLCAAPGSWCQVAAK 65
Query: 63 RVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPN 122
+PVGS ++G+DLVPIAPIRG + DIT + R + + V D V+HDG+PN
Sbjct: 66 HMPVGSKIVGVDLVPIAPIRGVKTFVGDITDDKTRKIIVTYLRREPV---DCVIHDGAPN 122
Query: 123 VGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVD 182
VGG W+++ QN+LV+ + K+A+ L P G FVTKVFRSQD+ +++ +KQLF+KVE
Sbjct: 123 VGGVWSRDLFEQNSLVLHAAKMASTLLRPGGWFVTKVFRSQDFHKLVWVMKQLFDKVEAT 182
Query: 183 KPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRHRD- 241
KP ASR SAEI+++ YKAP ++DP + + + +F VE K++ +
Sbjct: 183 KPLASRMESAEIFVVCAGYKAPKQLDPAMFNAQKVF-SDVEEEKILTPSGALALPKSNVP 241
Query: 242 -GYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
GYE+ T V+ +DF+ ++P L S + F P A+ + + +E+ LC
Sbjct: 242 LGYEEFATIQHHVATFSDFLNCSDPKSFLRSHHELRFTSPEDKALLRSKYSKKELVYLCG 301
Query: 301 DLRVLGKQDFKHLLKWRMQI 320
DL+ +G D + +++WR QI
Sbjct: 302 DLQQVGNADVRRMIRWREQI 321
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 83/137 (60%), Gaps = 18/137 (13%)
Query: 618 SSDDSSSDESEDEEV-------DTKAEILACAKKMLRKKQREQILDDAYNRYMF-DDDGL 669
S ++ E+E EEV + +A LA A +ML + R IL+ + NRY F DDD L
Sbjct: 735 SRQGGTNKETEFEEVPVALTDPEIRARTLAIATRMLDPRSRRDILEASINRYTFNDDDDL 794
Query: 670 PDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLE--- 726
PDWF+ +E+RH + I PVT EE+ A + +FKE++ARP+KKV EA RK+R A R L+
Sbjct: 795 PDWFVRDEQRHCRVILPVTAEEVEAQRKRFKELNARPSKKVMEAVQRKRRRAQRMLKGLI 854
Query: 727 -------KVRKKANVIS 736
+ R+KAN +S
Sbjct: 855 ERGKLDPRAREKANNMS 871
>gi|389601830|ref|XP_001565969.2| putative FtsJ cell division protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322505203|emb|CAM45493.2| putative FtsJ cell division protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 927
Score = 268 bits (685), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 136/320 (42%), Positives = 199/320 (62%), Gaps = 6/320 (1%)
Query: 3 KVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQ 62
K K K RLD YYRLAK+ GYR+R+++KL+QL+ K+ FL S ++DLCAAPGGW QVA Q
Sbjct: 6 KKKAKTRLDAYYRLAKDQGYRARSAYKLIQLNRKYDFLAKSRVLVDLCAAPGGWCQVAAQ 65
Query: 63 RVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPN 122
+P+GS ++G+DLVPIAPIRG + DI + R + +++ V D V+HDG+PN
Sbjct: 66 HMPIGSKIVGVDLVPIAPIRGVKTFVGDIVDDKTRKMIVTYLKKEPV---DCVIHDGAPN 122
Query: 123 VGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVD 182
VGG W+++ QNALV+ S K+A L G FVTKVFRS D+ ++L+ KQLF+KVE
Sbjct: 123 VGGVWSRDLFDQNALVLASAKMACSMLKASGWFVTKVFRSPDFHNLLWVFKQLFDKVEAT 182
Query: 183 KPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDV--LRGTKQKRHR 240
KP ASR SAEI+++ +KAP IDP + + +F V K+V L T +
Sbjct: 183 KPQASRMESAEIFVVCAGFKAPKNIDPAFFNPQKVF-AEVGEEKIVSASGLLVTPKSDVP 241
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
GY++ T +V+ +DF+ +++P L + F D A + + +E+ LC
Sbjct: 242 IGYDEFATVSHRVASFSDFLRADDPKGFLKIHHELRFSDDVDKAYLKSKSSKKELVYLCG 301
Query: 301 DLRVLGKQDFKHLLKWRMQI 320
DL+ +G+ D + +L+WR Q+
Sbjct: 302 DLQQVGEADLRRMLRWREQL 321
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 75/112 (66%), Gaps = 8/112 (7%)
Query: 622 SSSDESEDEEV-------DTKAEILACAKKMLRKKQREQILDDAYNRYMF-DDDGLPDWF 673
S +++E EE+ D +A LA A+KML K R ILD + NRY+F DDD LPDWF
Sbjct: 755 SGKEDTEFEEIPIAMTDPDIRARTLAIAQKMLDPKARRDILDASVNRYVFNDDDDLPDWF 814
Query: 674 LEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKL 725
+++E+R+ + + PVT EEI + +F+E++ARP++KV EA RK+R A R L
Sbjct: 815 VKDEQRNCRVVLPVTAEEIEEQRRRFQELNARPSRKVMEAMGRKRRKAQRML 866
>gi|167388553|ref|XP_001738607.1| ribosomal RNA methyltransferase [Entamoeba dispar SAW760]
gi|165898080|gb|EDR25052.1| ribosomal RNA methyltransferase, putative [Entamoeba dispar SAW760]
Length = 829
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 136/315 (43%), Positives = 197/315 (62%), Gaps = 20/315 (6%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDKYY LAK++GYR+R+++KLVQ++ ++ FL S+H ++DLCAAPGGW QVA + +P
Sbjct: 8 GKERLDKYYHLAKQYGYRARSAFKLVQMNKRYDFLSSAHILIDLCAAPGGWCQVATKEMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVME-EHGVRAFDLVLHDGSPNVG 124
V S + G+DL PI PI + DIT C A +KK+M+ EH D+VLHDGSPN+G
Sbjct: 68 VESKIFGVDLEPILPIPRCTTYVGDITTGMCFAEMKKLMKGEHA----DVVLHDGSPNMG 123
Query: 125 GAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKP 184
+W Q+A +Q+ L I ++K A FL G F++KVFRSQDY ++L+ ++ F+ V KP
Sbjct: 124 KSWIQDAYTQSELCIAALKFAVTFLKKGGWFISKVFRSQDYYAILFVFEKFFKSVIATKP 183
Query: 185 AASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRHRDGYE 244
ASR+ SAE+YL+ + AP+K DP LLD K++F E +V D+ + K GY+
Sbjct: 184 PASRNTSAEVYLVCKDFLAPSKYDPNLLDPKFVF-AKEEETQVPDLFSTKRPKPQ--GYD 240
Query: 245 DGDTTLRKVSLATDFIWSNNPLEILGSVTSITF--GDPACSAIKDHELTTEEVKALCDDL 302
+ + A +F+ + +P L + T+I F G P TE++K D+
Sbjct: 241 TSKALVYNIGNAKEFLQAEDPKAWLATHTAIQFDEGLP----------VTEDIKGYGSDI 290
Query: 303 RVLGKQDFKHLLKWR 317
R+LG + K LLKWR
Sbjct: 291 RMLGSAELKLLLKWR 305
>gi|340509133|gb|EGR34695.1| hypothetical protein IMG5_003560 [Ichthyophthirius multifiliis]
Length = 778
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 137/349 (39%), Positives = 219/349 (62%), Gaps = 18/349 (5%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D +YR+AKE GYRSRA +KL+Q++ K+SFL ++AV+DLCAAPGGW+QV + P+
Sbjct: 14 DIHYRMAKESGYRSRACFKLIQINKKYSFLEKANAVIDLCAAPGGWLQVVQKFSPITCKK 73
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+GLDLVPI I G + QDIT P+C +KK E +G++A D+VL+DG+PN+G W ++
Sbjct: 74 IGLDLVPIKAIPGVKTFVQDITTPQCYQLLKK--ELNGIKA-DVVLNDGAPNIGSNWQKD 130
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
A SQ L + ++KLA FL G FVTKVFRS+DY+++++ K+ F+ +E +KP ASR
Sbjct: 131 AFSQTELTLCALKLACNFLTKGGIFVTKVFRSKDYNALVWVCKKFFKTIEANKPKASRFQ 190
Query: 191 SAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVE-------PRKVVDVLRGTKQKRHRDGY 243
SAEI+L+ + AP ID +L ++KY+F+ + + +V + + +++R R GY
Sbjct: 191 SAEIFLVCSDFIAPDFIDDKLFEIKYIFKDTEDDYYTNQVQHEVNSIDKIMQKRRKRVGY 250
Query: 244 EDG--DTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDD 301
D T + + A +F+ NNP + + +I+F + + E+ K LC+D
Sbjct: 251 ADDVKQTVFQAIPFA-EFVNVNNPFAVFLTHNAISFNTQVDKNLLNVAQGPEDWKELCED 309
Query: 302 LRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADN 350
+ VLGK+D L+KWR +I+ + ++ + A++ +NEE+++N
Sbjct: 310 ILVLGKRDIAKLIKWRNKIQHS-QKKQRQQLKATSGK----QNEENSEN 353
>gi|146091082|ref|XP_001466438.1| putative FtsJ cell division protein [Leishmania infantum JPCM5]
gi|134070800|emb|CAM69158.1| putative FtsJ cell division protein [Leishmania infantum JPCM5]
Length = 925
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 135/320 (42%), Positives = 198/320 (61%), Gaps = 6/320 (1%)
Query: 3 KVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQ 62
K K K RLD YYRLAK+ GYR+R+++KL+QL+ K+ FL S ++DLCAAPGGW QVA Q
Sbjct: 6 KKKAKTRLDAYYRLAKDQGYRARSAYKLIQLNRKYDFLAKSRVLVDLCAAPGGWCQVAAQ 65
Query: 63 RVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPN 122
+ +GS ++G+DLVPIAPIRG + DIT + R + +++ V D V+HDG+PN
Sbjct: 66 HMAIGSKIVGVDLVPIAPIRGVKTFVGDITDDKTRKMIVTYLKKEPV---DCVIHDGAPN 122
Query: 123 VGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVD 182
VGG W+++ QNALV+ S K+A L G FVTKVFRS D+ ++L+ KQLFEKVE
Sbjct: 123 VGGVWSRDLFDQNALVLASAKMACSMLKANGWFVTKVFRSPDFHNLLWVFKQLFEKVEAT 182
Query: 183 KPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDV--LRGTKQKRHR 240
KP ASR SAEI+++ +KAP IDP + + +F V K+V + +
Sbjct: 183 KPQASRMESAEIFVVCAGFKAPKSIDPAFFNPQKVF-AEVGQEKIVSASGMLVAPKSNVP 241
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
GY++ T V+ +DF+ +++P L + + F D A + + +E+ LC
Sbjct: 242 TGYDEFATVSHHVASFSDFLNADDPKVFLKTHHELRFSDDADKEYLKSKSSKKELVYLCG 301
Query: 301 DLRVLGKQDFKHLLKWRMQI 320
DL+ +G+ D + +L+WR Q+
Sbjct: 302 DLQQVGEADLRRMLRWREQL 321
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 94/169 (55%), Gaps = 16/169 (9%)
Query: 558 DLGKLGSEDETQVDKQAEKHSIPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGAD 617
D+GK+ +++ + ++ H E KQ N S N + + +FE +P D
Sbjct: 711 DIGKVTTQELIRQQRKQTLHDNKEVRKQNKRN-KNNTNSGKNSSGKQDTEFEEIPIAMTD 769
Query: 618 SSDDSSSDESEDEEVDTKAEILACAKKMLRKKQREQILDDAYNRYMF-DDDGLPDWFLEE 676
D +A LA A+KML K R +ILD + NRY+F DDD LPDWF+++
Sbjct: 770 P--------------DIRARTLAIAQKMLDPKARREILDASVNRYVFNDDDDLPDWFVKD 815
Query: 677 ERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKL 725
E+R+ + + PVT EEI + +F+E++ARP++KV EA RK+R A R L
Sbjct: 816 EQRNCRVVLPVTAEEIEEQRRRFQELNARPSRKVMEAMGRKRRKAQRML 864
>gi|398017708|ref|XP_003862041.1| FtsJ cell division protein, putative [Leishmania donovani]
gi|322500269|emb|CBZ35347.1| FtsJ cell division protein, putative [Leishmania donovani]
Length = 925
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 135/320 (42%), Positives = 198/320 (61%), Gaps = 6/320 (1%)
Query: 3 KVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQ 62
K K K RLD YYRLAK+ GYR+R+++KL+QL+ K+ FL S ++DLCAAPGGW QVA Q
Sbjct: 6 KKKAKTRLDAYYRLAKDQGYRARSAYKLIQLNRKYDFLAKSRVLVDLCAAPGGWCQVAAQ 65
Query: 63 RVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPN 122
+ +GS ++G+DLVPIAPIRG + DIT + R + +++ V D V+HDG+PN
Sbjct: 66 HMAIGSKIVGVDLVPIAPIRGVKTFVGDITDDKTRKMIVTYLKKEPV---DCVIHDGAPN 122
Query: 123 VGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVD 182
VGG W+++ QNALV+ S K+A L G FVTKVFRS D+ ++L+ KQLFEKVE
Sbjct: 123 VGGVWSRDLFDQNALVLASAKMACSMLKANGWFVTKVFRSPDFHNLLWVFKQLFEKVEAT 182
Query: 183 KPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDV--LRGTKQKRHR 240
KP ASR SAEI+++ +KAP IDP + + +F V K+V + +
Sbjct: 183 KPQASRMESAEIFVVCAGFKAPKSIDPAFFNPQKVF-AEVGQEKIVSASGMLVAPKSNVP 241
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
GY++ T V+ +DF+ +++P L + + F D A + + +E+ LC
Sbjct: 242 TGYDEFATVSHHVASFSDFLNADDPKVFLKTHHELRFSDDADKEYLKSKSSKKELVYLCG 301
Query: 301 DLRVLGKQDFKHLLKWRMQI 320
DL+ +G+ D + +L+WR Q+
Sbjct: 302 DLQQVGEADLRRMLRWREQL 321
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 98/172 (56%), Gaps = 22/172 (12%)
Query: 558 DLGKLGSEDET-QVDKQA--EKHSIPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAP 614
D+GK+ +++ Q KQ + + ++ K+ N +G S+ Q +E FE +P
Sbjct: 711 DIGKVTTQELIRQQRKQTLQDNKEVRKQNKRNKNNTNSGKNSSGKQDTE----FEEIPIA 766
Query: 615 GADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQREQILDDAYNRYMF-DDDGLPDWF 673
D D +A LA A+KML K R +ILD + NRY+F DDD LPDWF
Sbjct: 767 MTDP--------------DIRARTLAIAQKMLDPKARREILDASVNRYVFNDDDDLPDWF 812
Query: 674 LEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKL 725
+++E+R+ + + PVT EEI + +F+E++ARP++KV EA RK+R A R L
Sbjct: 813 VKDEQRNCRVVLPVTAEEIEEQRRRFQELNARPSRKVMEAMGRKRRKAQRML 864
>gi|302758758|ref|XP_002962802.1| hypothetical protein SELMODRAFT_438129 [Selaginella moellendorffii]
gi|300169663|gb|EFJ36265.1| hypothetical protein SELMODRAFT_438129 [Selaginella moellendorffii]
Length = 639
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 136/242 (56%), Positives = 181/242 (74%), Gaps = 20/242 (8%)
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V S+V+G+DLVPI P+R +L+ DIT P+C + + K+++++G+R D+VLHDGSPNVGG
Sbjct: 7 VRSVVIGVDLVPIRPVR---ALQGDITTPKCASDIGKILDQNGLRMVDVVLHDGSPNVGG 63
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AWA+EAM+Q++LV+DS+KLAT+FLAPKGTFVTKVFRSQDY+++ Y +QLF KVEV
Sbjct: 64 AWAKEAMTQSSLVLDSLKLATKFLAPKGTFVTKVFRSQDYNALKYAFEQLFAKVEV---- 119
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKV-------VDVLRGTKQKR 238
ASRS SAEIY++G+KY AP KIDPR LD ++LF+ +P KV V L+ +K R
Sbjct: 120 ASRSTSAEIYVVGLKYLAPVKIDPRNLDPRFLFEEIPQPPKVGFVIVNKVLALKPSKLCR 179
Query: 239 HRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKAL 298
Y+D +TT RK A DF+WS PLE+LGS+TSI+F DP S IKDH T++EV +
Sbjct: 180 ----YDDANTTFRKDCTAADFVWSEKPLELLGSITSISFDDPKSSPIKDHAETSDEV--V 233
Query: 299 CD 300
CD
Sbjct: 234 CD 235
>gi|407393473|gb|EKF26619.1| FtsJ cell division protein, putative [Trypanosoma cruzi
marinkellei]
Length = 911
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/323 (40%), Positives = 198/323 (61%), Gaps = 12/323 (3%)
Query: 3 KVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQ 62
K K K RLD YYRLAK+ G+R+R+++KL+QL+ K+ FL S ++DLCAAPGGW QVA +
Sbjct: 6 KKKAKTRLDAYYRLAKDQGFRARSAFKLIQLNRKYDFLAKSRVLVDLCAAPGGWCQVAAK 65
Query: 63 RVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPN 122
+PVGS ++G+DLVPIAPIRG + DIT + R + +++ V D V+HDG+PN
Sbjct: 66 HMPVGSKIVGVDLVPIAPIRGVKTFVGDITDDKTRKMIVTYLKKEPV---DCVIHDGAPN 122
Query: 123 VGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVD 182
VGG W+++ QNALV+ + K+A L P G FVTKVFRSQD+ +++ LKQLFEKVE
Sbjct: 123 VGGVWSRDLFEQNALVLHAAKMAASMLKPSGWFVTKVFRSQDFHKLMWVLKQLFEKVEAT 182
Query: 183 KPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-----QGSVEPRKVVDVLRGTKQK 237
KP ASR SAEI+++ +KAP ++DP + + + +F + + P + V +
Sbjct: 183 KPLASRMESAEIFVVCAGFKAPKQLDPSMFNAQKVFSDVGEEKILTPSGALVVPKSNVPT 242
Query: 238 RHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKA 297
GY + T V+ ++F+ ++P L S + F + + +E+
Sbjct: 243 ----GYSEFATVSHHVASFSEFLHCSDPKSFLRSHHELRFSAAEDKVYLKSKHSKKELVY 298
Query: 298 LCDDLRVLGKQDFKHLLKWRMQI 320
LC DL+ +G D + +L+WR Q+
Sbjct: 299 LCGDLQQVGDADLRRMLRWREQL 321
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 95/179 (53%), Gaps = 29/179 (16%)
Query: 558 DLGKLGSEDETQVDKQAEKHSIPEKA---KQKMANDAAGPKSTHNQVSEVEGDFEIVPAP 614
D+GKL ++ ++ +Q K ++ E A KQ + N ++ K E FE +P
Sbjct: 700 DMGKLTTQ---ELVRQQRKQTLKENAATRKQNVRNKSSARKD--------ETGFEEIPVA 748
Query: 615 GADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQREQILDDAYNRYMF-DDDGLPDWF 673
D +A LA A KML K R ILD + NRY F DDD LPDWF
Sbjct: 749 LTDPQ--------------IRARTLAIATKMLDPKSRRDILDASINRYTFNDDDDLPDWF 794
Query: 674 LEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKA 732
+++E+R+ + + PVT EEI + +F+E++ARP KKV EA RK+R A R L + +K
Sbjct: 795 IKDEQRNCKVVLPVTAEEIEVQRQRFREMNARPGKKVMEAVQRKRRRAQRMLRSMIEKG 853
>gi|407866848|gb|EKG08418.1| FtsJ cell division protein, putative [Trypanosoma cruzi]
Length = 910
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 130/323 (40%), Positives = 197/323 (60%), Gaps = 12/323 (3%)
Query: 3 KVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQ 62
K K K RLD YYRLAK+ G+R+R+++KL+QL+ K+ FL ++DLCAAPGGW QVA +
Sbjct: 6 KKKAKTRLDAYYRLAKDQGFRARSAFKLIQLNRKYDFLAKGRVLVDLCAAPGGWCQVAAK 65
Query: 63 RVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPN 122
+PVGS ++G+DLVPIAPIRG + DIT + R + +++ V D V+HDG+PN
Sbjct: 66 HMPVGSKIVGVDLVPIAPIRGVKTFVGDITDDKTRKMIVTYLKKEPV---DCVIHDGAPN 122
Query: 123 VGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVD 182
VGG W+++ QNALV+ + K+A L P G FVTKVFRSQD+ +++ LKQLF+KVE
Sbjct: 123 VGGVWSRDLFEQNALVLHAAKMAASMLKPSGWFVTKVFRSQDFHKLMWVLKQLFDKVEAT 182
Query: 183 KPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-----QGSVEPRKVVDVLRGTKQK 237
KP ASR SAEI+++ +KAP ++DP + + + +F + + P + V +
Sbjct: 183 KPLASRMESAEIFVVCAGFKAPKQLDPSMFNAQKVFSDVGEEKILTPSGALVVPKSNVPT 242
Query: 238 RHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKA 297
GY + T V+ ++F+ ++P L S + F + + +E+
Sbjct: 243 ----GYSEFATVSHHVAPFSEFLHCSDPKGFLRSHHELRFSAAEDKVYLKSKHSKKELVY 298
Query: 298 LCDDLRVLGKQDFKHLLKWRMQI 320
LC DL+ +G D + +L+WR Q+
Sbjct: 299 LCGDLQQVGDADLRRMLRWREQL 321
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 116/231 (50%), Gaps = 32/231 (13%)
Query: 558 DLGKLGSEDET-QVDKQAEKHSIPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGA 616
D+GKL +++ Q KQ K ++ + KQ + N ++ K E FE +P
Sbjct: 702 DMGKLTTQELVRQQRKQTLKENVATR-KQNVRNKSSARKD--------ETGFEEIPVALT 752
Query: 617 DSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQREQILDDAYNRYMF-DDDGLPDWFLE 675
D +A LA A KML K R ILD + NRY F DDD LPDWF++
Sbjct: 753 DPQ--------------IRARTLAIATKMLDPKSRRDILDASINRYTFNDDDNLPDWFIK 798
Query: 676 EERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVI 735
+E+R+ + I PVT EEI + +F+E++ARP KKV EA RK+R A R L + +K
Sbjct: 799 DEQRNCKVILPVTAEEIEDQRQRFREMNARPGKKVMEAMQRKRRRAQRMLRSMIEKGKT- 857
Query: 736 SDQADISDRSKRKQIEQLYKSAV----PKRPKKEYVVAKKGVQVRAGKGKV 782
+++ + +L +S PKR KK + KK ++R K K+
Sbjct: 858 --DPRAREKANNASVRKLMRSQAVKGDPKRKKKGPMDRKKMGEMRRAKQKL 906
>gi|440290047|gb|ELP83501.1| AdoMet-dependent rRNA methyltransferase spb1, putative [Entamoeba
invadens IP1]
Length = 788
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 135/313 (43%), Positives = 196/313 (62%), Gaps = 18/313 (5%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
K RLDKYY LAK++GYR+R+++KL+Q++ ++ FL S+H ++DLCAAPGGW QVA + +PV
Sbjct: 9 KERLDKYYHLAKQYGYRARSAFKLIQMNKRYDFLGSAHVLIDLCAAPGGWCQVAQKEMPV 68
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
+ G+DL I PI + DIT P C A +KK+M+ G +A D+VLHDGSPN+G +
Sbjct: 69 DQRIFGVDLEAILPIPKVKTYVGDITTPMCFAEMKKLMK--GSQA-DVVLHDGSPNMGKS 125
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
W Q+A +Q+ L I ++K A FL G F++KVFRSQDY S+LY ++ F+ V KP A
Sbjct: 126 WIQDAYTQSELCIAALKFAVNFLRKGGWFISKVFRSQDYYSILYVFEKFFKTVTATKPPA 185
Query: 187 SRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRHRDGYEDG 246
SR+ SAE+YL+ + AP+K DP LLD K++F S E V+ L +K+ + + GY+
Sbjct: 186 SRNTSAEVYLVCKDFLAPSKFDPNLLDPKFVF--SKEEETVIPDLFSSKRSKPQ-GYDTS 242
Query: 247 DTTLRKVSLATDFIWSNNPLEILGSVTSITF--GDPACSAIKDHELTTEEVKALCDDLRV 304
+ + A DF+ P L + T + F G P E+V A +D+++
Sbjct: 243 KSLIYNEGNAKDFLKCEEPKNWLATHTKMVFDEGLP----------VNEKVIAYGEDIKM 292
Query: 305 LGKQDFKHLLKWR 317
LG + K LLKWR
Sbjct: 293 LGVAELKVLLKWR 305
>gi|221057686|ref|XP_002261351.1| methyltransferase [Plasmodium knowlesi strain H]
gi|194247356|emb|CAQ40756.1| methyltransferase, putative [Plasmodium knowlesi strain H]
Length = 1009
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 140/394 (35%), Positives = 228/394 (57%), Gaps = 52/394 (13%)
Query: 1 MGKVK--GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQ 58
MGK K GK R+DKYY+LAK GYR+R+++KL+Q+ K++ + ++ ++DLCAAPGGW+Q
Sbjct: 1 MGKKKKVGKERIDKYYKLAKSAGYRARSAFKLIQIAQKYNIFKDANILIDLCAAPGGWLQ 60
Query: 59 VAVQRVPVGSLVLGLDLVPIAPI-RGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117
VA + + S ++G+DLVPI I ++L+ DIT C ++K +++ D++L+
Sbjct: 61 VAYKNMKRSSTIIGVDLVPIRKIDNNVITLKCDITTSACVKQIKNIIKNEKA---DVILN 117
Query: 118 DGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFE 177
DG+PNVG ++ ++ +QN LV++S+K+A FL KG F+TKVFR+++Y S+++ +++LF
Sbjct: 118 DGAPNVGTTYSYDSFNQNVLVLNSIKIANLFLKKKGIFITKVFRNEEYVSLIWVMEKLFG 177
Query: 178 KVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF--QGSVEPRKVV------- 228
+V+ KP +SR S+EIYL+G+ + K+D +L D Y+F Q + K+V
Sbjct: 178 QVKHIKPRSSREISSEIYLVGLNF-LSTKVDKKLFDYNYVFSEQFKQDSNKIVTNDASDN 236
Query: 229 -----------------------DVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNP 265
+ K+K++R GYE GD +V+ +FI S+N
Sbjct: 237 DLFTDSSDNEKENQKKNKKKKGLSTILKEKKKKNRQGYEVGDDY--RVTDICNFIHSDNY 294
Query: 266 LEILGSVTSITFG-------DPAC----SAIKDHELTTEEVKALCDDLRVLGKQDFKHLL 314
+++L TF DP +AI + TT+E+ LC DL+VLGK D L+
Sbjct: 295 VDLLIKTNKFTFDRDYLTSEDPLVRNTYTAIYKNPSTTQEILQLCKDLKVLGKSDLFQLI 354
Query: 315 KWRMQIKKAFSSAEKATVPASASAPTEGENEEDA 348
KWR ++KK +S + + A E ++E A
Sbjct: 355 KWRYKVKKGIASVDAEAQSSQAVDAEEKTSQELA 388
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 6/217 (2%)
Query: 555 QNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAP 614
+ GD K DE +Q K +P K +K N K +N+V F IV
Sbjct: 736 ETGDEEKFNEVDE----RQLPKIPLPNKLARKERNKQLREKYGNNEVKMKNTTFSIVKTD 791
Query: 615 GADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQREQILDDAYNR--YMFDDDGLPDW 672
S+ + + ++ D A I +K++ KK R ++DD++NR Y+ D+D LP+W
Sbjct: 792 EDGQSNVGAYFSNLIKDEDELAFIKCIGEKLIHKKSRMDLIDDSFNRHSYLDDEDMLPEW 851
Query: 673 FLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKA 732
F+EEE++ R+ + P+ K + K+ +I P KKV EAK R K+ + K++K+ K
Sbjct: 852 FVEEEKKFRRPVIPIDKSILNQYKSSINKITKMPIKKVIEAKMRNKKREIAKMKKLEAKI 911
Query: 733 NVISDQADISDRSKRKQIEQLYKSAVPKRPKKEYVVA 769
I + + + L K+ K+ +K YVV
Sbjct: 912 GKIEKEEEDPFLKHKAITNILKKNKSEKKREKSYVVC 948
>gi|156101269|ref|XP_001616328.1| FtsJ-like methyltransferase [Plasmodium vivax Sal-1]
gi|148805202|gb|EDL46601.1| FtsJ-like methyltransferase, putative [Plasmodium vivax]
Length = 1006
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 136/372 (36%), Positives = 223/372 (59%), Gaps = 52/372 (13%)
Query: 1 MGKVK--GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQ 58
MGK K GK R+DKYY+LAK GYR+R+++KL+Q+ K++ + ++ ++DLCAAPGGW+Q
Sbjct: 1 MGKKKKVGKERIDKYYKLAKSAGYRARSAFKLIQIAQKYNIFKDANILIDLCAAPGGWLQ 60
Query: 59 VAVQRVPVGSLVLGLDLVPIAPI-RGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117
VA + + S ++G+DLVPI I ++L+ DIT C ++K +++ D++L+
Sbjct: 61 VAYKNMKRSSTIIGVDLVPIRKIDNNVITLKCDITTGACIKQIKNIIKNEKA---DVILN 117
Query: 118 DGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFE 177
DG+PNVG ++ ++ +QN LV++S+K+A FL +G F+TKVFR+++Y S+++ +++LF
Sbjct: 118 DGAPNVGTTYSYDSFNQNVLVLNSIKIANLFLKKRGIFITKVFRNEEYVSLIWVMEKLFG 177
Query: 178 KVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF--QGSVEPRKVV------- 228
+V+ KP +SR S+EIYL+G+ + AK+D +L D Y+F Q + K V
Sbjct: 178 QVKHIKPRSSREISSEIYLIGLNF-LSAKVDKKLFDYTYVFSEQFKQDSNKAVTNDASED 236
Query: 229 DVLRGT-----------------------KQKRHRDGYEDGDTTLRKVSLATDFIWSNNP 265
D+ + K+K++R GY+ GD +V+ +FI S+N
Sbjct: 237 DIFSNSSDNEKEDKKKSKKKKGLSTILKEKKKKNRQGYDLGDDY--RVTDICNFIHSDNY 294
Query: 266 LEILGSVTSITFG-------DPAC----SAIKDHELTTEEVKALCDDLRVLGKQDFKHLL 314
+++L TF DP +AI + TT+E+ LC DL+VLGK D HL+
Sbjct: 295 VDLLIKTNKFTFDKDYLTSEDPLVKSTYTAIYKNPSTTQEILQLCKDLKVLGKSDLFHLI 354
Query: 315 KWRMQIKKAFSS 326
KWR +++K +S
Sbjct: 355 KWRYKVRKGVAS 366
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 109/222 (49%), Gaps = 17/222 (7%)
Query: 579 IPEKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPA--PGADSSDDSSSDESEDEEVDTKA 636
+P K +K K +N+V F IV G + S+ +DE D A
Sbjct: 753 LPNKLARKERKKKLRVKYGNNEVKMKNTTFSIVKTDESGQGNVGAYFSNLIKDE--DELA 810
Query: 637 EILACAKKMLRKKQREQILDDAYNR--YMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAA 694
I +K++ KK R ++DD++NR Y+ D+D LP+WF+EEE++ R+ + P+ K +
Sbjct: 811 FIKCIGEKLIHKKSRMDLIDDSFNRHSYLEDEDMLPEWFVEEEKKFRRPVIPIDKSILNQ 870
Query: 695 MKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVIS-DQADISDRSKRKQIEQ- 752
K+ +I P KKV EAK R K+ + K++K+ K I D+ D K K I
Sbjct: 871 YKSSINKITKMPIKKVIEAKMRNKKREIAKMKKLEAKIGKIEKDEED--PFLKHKAITNI 928
Query: 753 LYKSAVPKRPKKEYVVAKKGVQVRAGKGKVLVDPRMKKDSRT 794
L K+ K+ +K YVV GKG + + + KK RT
Sbjct: 929 LKKNKSEKKREKSYVVC-------TGKGSRVSNKKNKKGGRT 963
>gi|71400687|ref|XP_803129.1| FtsJ cell division protein [Trypanosoma cruzi strain CL Brener]
gi|70865797|gb|EAN81683.1| FtsJ cell division protein, putative [Trypanosoma cruzi]
Length = 651
Score = 259 bits (663), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 131/319 (41%), Positives = 196/319 (61%), Gaps = 4/319 (1%)
Query: 3 KVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQ 62
K K K RLD YYRLAK+ G+R+R+++KL+QL+ K+ FL S ++DLCAAPGGW QVA +
Sbjct: 6 KKKAKTRLDAYYRLAKDQGFRARSAFKLIQLNRKYDFLAKSRVLVDLCAAPGGWCQVAAK 65
Query: 63 RVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPN 122
+PVGS ++G+DLVPIAPIRG + DIT + R + ++ V D V+HDG+PN
Sbjct: 66 HMPVGSKIVGVDLVPIAPIRGVKTFVGDITDDKTRKMIVTYFKKEPV---DCVIHDGAPN 122
Query: 123 VGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVD 182
VGG W+++ QNALV+ + K+A L P G FVTKVFRSQD+ +++ LKQLF+KVE
Sbjct: 123 VGGVWSRDLFEQNALVLHAAKMAASMLKPSGWFVTKVFRSQDFHKLMWVLKQLFDKVEAT 182
Query: 183 KPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRH-RD 241
KP ASR SAEI+++ +KAP ++DP + + + +F E + + K +
Sbjct: 183 KPLASRMESAEIFVVCAGFKAPKQLDPSMFNAQKVFSDVGEEKILTPSGALVVPKSNVPT 242
Query: 242 GYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDD 301
GY + T V+ ++F+ ++P L S + F + + +E+ LC D
Sbjct: 243 GYSEFATVSHHVASFSEFLHCSDPKGFLRSHHELRFSAAEDKVYLKSKHSKKELVYLCGD 302
Query: 302 LRVLGKQDFKHLLKWRMQI 320
L+ +G D + +L+WR Q+
Sbjct: 303 LQQVGDADLRRMLRWREQL 321
>gi|258567254|ref|XP_002584371.1| AdoMet-dependent rRNA methyltransferase spb-1 [Uncinocarpus reesii
1704]
gi|237905817|gb|EEP80218.1| AdoMet-dependent rRNA methyltransferase spb-1 [Uncinocarpus reesii
1704]
Length = 768
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 123/281 (43%), Positives = 185/281 (65%), Gaps = 10/281 (3%)
Query: 56 WMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV 115
W QVA + +P SL++G+DL PI PI ++ + DIT +CRA +++ ++ D V
Sbjct: 19 WCQVAAECMPTDSLIVGVDLSPIKPIPRVITFQSDITTDKCRATIRQHLKTWKA---DTV 75
Query: 116 LHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL 175
LHDG+PNVG AW Q+A SQ LV+ S+KLAT+FL P G+FVTKVFRS+DY+ +L+ KQL
Sbjct: 76 LHDGAPNVGTAWVQDAFSQAELVLQSLKLATEFLVPGGSFVTKVFRSKDYNPLLWVFKQL 135
Query: 176 FEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRG 233
F VE KP +SR+ SAEI+++ +KAP IDP+ LD +++F P V
Sbjct: 136 FTSVEATKPPSSRNVSAEIFVVCRGFKAPKHIDPKFLDSRHVFAELQDPTPNNEAKVFNP 195
Query: 234 TKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDH 288
K+KR R+GYE+GD T K T+FI + +P+ ILG+ +++F GD A + ++
Sbjct: 196 EKKKRKREGYEEGDYTQHKEIAVTEFINTTDPIAILGTYNTLSFQQSASGDLALATLERL 255
Query: 289 ELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEK 329
TT+E++ C+DL+VLGK++F+ LL+WR+++++ F A K
Sbjct: 256 PETTDEIRKCCEDLKVLGKKEFRTLLRWRLKVREKFGLAVK 296
>gi|68074303|ref|XP_679066.1| methyltransferase [Plasmodium berghei strain ANKA]
gi|56499717|emb|CAH95392.1| methyltransferase, putative [Plasmodium berghei]
Length = 978
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 131/375 (34%), Positives = 216/375 (57%), Gaps = 58/375 (15%)
Query: 1 MGKVK--GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQ 58
MGK K GK R+DKYY+LAK GYR+R+++KL+Q+ K++ ++++ ++DLCAAPGGW+Q
Sbjct: 1 MGKKKKVGKERIDKYYKLAKSAGYRARSAFKLIQIARKYNIFKNANILIDLCAAPGGWLQ 60
Query: 59 VAVQRVPVGSLVLGLDLVPIAPI-RGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117
VA + + S ++G+DLVPI I ++++ DIT EC ++K +++ D++L+
Sbjct: 61 VAYKNMNKNSTIIGVDLVPIRKIDNNVITIKSDITSAECIKKIKDIIQYEKA---DVILN 117
Query: 118 DGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFE 177
DG+PNVG ++ ++ +QN LV+ S+KLA +FL G F+TKVFR+++Y S+++ L++LF
Sbjct: 118 DGAPNVGTTYSYDSFNQNILVLSSIKLAYKFLTKGGIFITKVFRNEEYVSLIWVLEKLFG 177
Query: 178 KVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSV--EPRKV-------- 227
+V+ KP +SR S+EIYL+G+ + KID + D Y+F + K+
Sbjct: 178 EVKHIKPRSSREISSEIYLIGLNF-LGNKIDKKYFDFTYIFSNQFRKDENKLSNIHSKNE 236
Query: 228 ----------------------------VDVLRGTKQKRHRDGYEDGDTTLRKVSLATDF 259
++ + K+K++R GYE+GD + + +DF
Sbjct: 237 TEEDSENDISGNDTDNNTSKHKTKKKKGLNTILKEKKKKNRQGYEEGDDY--RTADISDF 294
Query: 260 IWSNNPLEILGSVTSITFG-----------DPACSAIKDHELTTEEVKALCDDLRVLGKQ 308
I S+N +++L F AI ++ T E+ LC DL+VLGK
Sbjct: 295 INSDNYVDLLIKSNKFIFDKNYEKSLDLLIKNTYEAIYTNKSTNNEIFNLCKDLKVLGKS 354
Query: 309 DFKHLLKWRMQIKKA 323
D +L+KWR +IKK+
Sbjct: 355 DLFNLIKWRYKIKKS 369
>gi|225561788|gb|EEH10068.1| AdoMet-dependent rRNA methyltransferase spb1 [Ajellomyces
capsulatus G186AR]
Length = 779
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 121/276 (43%), Positives = 180/276 (65%), Gaps = 10/276 (3%)
Query: 56 WMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV 115
W QVA + +P SL++G+DL PI PI ++ + DIT +CRA +++ ++ D V
Sbjct: 8 WCQVAAECMPSQSLIIGVDLAPIKPIPKVITFQSDITTDKCRATIRQHLKSWKA---DTV 64
Query: 116 LHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL 175
LHDG+PNVG AW Q+A SQ LV+ S+KLAT+FL P GTFVTKVFRS+DY+ +L+ KQL
Sbjct: 65 LHDGAPNVGVAWVQDAFSQAELVLQSLKLATEFLVPGGTFVTKVFRSKDYNPLLWVFKQL 124
Query: 176 FEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRG 233
F VE KP +SR+ SAEI+++ +KAP ID + LD K++F P V
Sbjct: 125 FNTVEATKPPSSRNVSAEIFVVCQGFKAPKHIDQKFLDPKHVFAELQDPTPNHEAKVFNP 184
Query: 234 TKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDH 288
K+KR RDGYE+G+ T K ++FI + +P+ ILG ++F GD A + +
Sbjct: 185 EKKKRKRDGYEEGNYTQFKEIPVSEFINTADPISILGEYNKLSFEQSIGGDLALATLARL 244
Query: 289 ELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAF 324
TT+E++ C+DL+VLGK++F++LL+WR+++++ F
Sbjct: 245 PETTKEIQLCCEDLKVLGKKEFRNLLRWRIKVREKF 280
>gi|95007320|emb|CAJ20540.1| methyltransferase, putative [Toxoplasma gondii RH]
gi|221482814|gb|EEE21145.1| ribosomal RNA methyltransferase, putative [Toxoplasma gondii GT1]
Length = 981
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 117/221 (52%), Positives = 162/221 (73%), Gaps = 5/221 (2%)
Query: 3 KVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGWMQVAV 61
K GK RLDK+Y LAKE GYR+R+++KL+QL +F F +S +V+DLCAAPGGW+QVA
Sbjct: 10 KKTGKQRLDKFYHLAKEQGYRARSAFKLLQLSQRFRLFEKSCASVVDLCAAPGGWLQVAA 69
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ PV + ++G+DLVPIAPIRG + DIT P+C A+++K+++ V DLVLHDGSP
Sbjct: 70 KHCPVATTIVGVDLVPIAPIRGVQTFTGDITTPQCAAKLRKLVKFGEV---DLVLHDGSP 126
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
N+G W+ +A SQN LV+ + KLA Q LA TFV+KVFRS DY+++LY L+ LFE+V+
Sbjct: 127 NMGTDWSVDAFSQNVLVLCAAKLACQLLAAGATFVSKVFRSADYAALLYVLQTLFERVDA 186
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGS 221
KP ASR+ SAEI+++ ++ P +D RL D K++F QGS
Sbjct: 187 TKPQASRAVSAEIFVVCRGFRKPPVLDERLFDPKHVFLQGS 227
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 72/136 (52%), Gaps = 10/136 (7%)
Query: 217 LFQGSVEPRK--VVDVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEIL-GSVT 273
+F GS RK +++R + KRHR+G D LR+V++ +F S +P +L
Sbjct: 277 IFFGSRGGRKGQFAELVR-RRLKRHRNG--DLLAGLRRVTI-DEFFRSKDPTTLLVEQAR 332
Query: 274 SITFGDPACS---AIKDHELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKA 330
I F PA + A+++H LTT E A D++VLGK + LLKWR ++KK A
Sbjct: 333 EIFFQTPAVALEEAVRNHRLTTPETLACLADVQVLGKAELAALLKWRFRVKKDVFLALGL 392
Query: 331 TVPASASAPTEGENEE 346
A+A P G NE+
Sbjct: 393 RTHAAAEKPPAGANED 408
>gi|325091232|gb|EGC44542.1| AdoMet-dependent rRNA methyltransferase SPB1 [Ajellomyces
capsulatus H88]
Length = 779
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 121/276 (43%), Positives = 180/276 (65%), Gaps = 10/276 (3%)
Query: 56 WMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV 115
W QVA + +P SL++G+DL PI PI ++ + DIT +CRA +++ ++ D V
Sbjct: 8 WCQVAAECMPSQSLIIGVDLAPIKPIPKVITFQSDITTDKCRATIRQHLKSWKA---DTV 64
Query: 116 LHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL 175
LHDG+PNVG AW Q+A SQ LV+ S+KLAT+FL P GTFVTKVFRS+DY+ +L+ KQL
Sbjct: 65 LHDGAPNVGVAWVQDAFSQAELVLQSLKLATEFLVPGGTFVTKVFRSKDYNPLLWVFKQL 124
Query: 176 FEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRG 233
F VE KP +SR+ SAEI+++ +KAP ID + LD K++F P V
Sbjct: 125 FNTVEATKPPSSRNVSAEIFVVCQGFKAPKHIDQKFLDPKHVFAELQDPTPNHEAKVFNP 184
Query: 234 TKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDH 288
K+KR RDGYE+G+ T K ++FI + +P+ ILG ++F GD A + +
Sbjct: 185 EKKKRKRDGYEEGNYTQFKEIPVSEFINTADPISILGEYNKLSFEQSIGGDLALATLARL 244
Query: 289 ELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAF 324
TT+E++ C+DL+VLGK++F++LL+WR+++++ F
Sbjct: 245 PETTKEIQLCCEDLKVLGKKEFRNLLRWRIKVREKF 280
>gi|240275390|gb|EER38904.1| AdoMet-dependent rRNA methyltransferase SPB1 [Ajellomyces
capsulatus H143]
Length = 779
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 120/276 (43%), Positives = 180/276 (65%), Gaps = 10/276 (3%)
Query: 56 WMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV 115
W QVA + +P S+++G+DL PI PI ++ + DIT +CRA +++ ++ D V
Sbjct: 8 WCQVAAECMPSQSIIIGVDLAPIKPIPKVITFQSDITTDKCRATIRQHLKSWKA---DTV 64
Query: 116 LHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL 175
LHDG+PNVG AW Q+A SQ LV+ S+KLAT+FL P GTFVTKVFRS+DY+ +L+ KQL
Sbjct: 65 LHDGAPNVGVAWVQDAFSQAELVLQSLKLATEFLVPGGTFVTKVFRSKDYNPLLWVFKQL 124
Query: 176 FEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRG 233
F VE KP +SR+ SAEI+++ +KAP ID + LD K++F P V
Sbjct: 125 FNTVEATKPPSSRNVSAEIFVVCQGFKAPKHIDQKFLDPKHVFAELQDPTPNHEAKVFNP 184
Query: 234 TKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDH 288
K+KR RDGYE+G+ T K ++FI + +P+ ILG ++F GD A + +
Sbjct: 185 EKKKRKRDGYEEGNYTQFKEIPVSEFINTADPISILGEYNKLSFEQSIGGDLALATLARL 244
Query: 289 ELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAF 324
TT+E++ C+DL+VLGK++F++LL+WR+++++ F
Sbjct: 245 PETTKEIQLCCEDLKVLGKKEFRNLLRWRIKVREKF 280
>gi|154283311|ref|XP_001542451.1| hypothetical protein HCAG_02622 [Ajellomyces capsulatus NAm1]
gi|150410631|gb|EDN06019.1| hypothetical protein HCAG_02622 [Ajellomyces capsulatus NAm1]
Length = 620
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 113/211 (53%), Positives = 154/211 (72%), Gaps = 3/211 (1%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDK+Y+LAKE GYR+RA++KL+QL+ K+ FL S V+DLCAAPG W QVA + +P
Sbjct: 8 GKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVVIDLCAAPGSWCQVAAECMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
SL++G+DL PI PI ++ + DIT +CRA +++ ++ D VLHDG+PNVG
Sbjct: 68 SQSLIIGVDLAPIKPIPKVITFQSDITTDKCRATIRQHLKSWKA---DTVLHDGAPNVGV 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
AW Q+A SQ LV+ S+KLAT+FL P GTFVTKVFRS+DY+ +L+ KQLF VE KP
Sbjct: 125 AWVQDAFSQAELVLQSLKLATEFLVPGGTFVTKVFRSKDYNPLLWVFKQLFNTVEATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKY 216
+SR+ SAEI+++ +KAP I P++LD K+
Sbjct: 185 SSRNVSAEIFVVCQGFKAPKHIVPKVLDPKH 215
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 112/168 (66%), Gaps = 10/168 (5%)
Query: 636 AEILACAKKM-LRKKQREQILDDAYNRYMF-DDDGLPDWFLEEERRHRQAIRPVTKEEIA 693
AE +A A+++ + +K ++DD +NRY F D DGLP+WFL++E +H + +RP+T A
Sbjct: 441 AEAMALAQQIAMGEKTTHDVVDDGFNRYTFRDTDGLPEWFLDDEGKHSKPLRPITAAAAA 500
Query: 694 AMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQL 753
A++ + + I+ARP KKV EAK RKK A ++LEK+RKK+ ++++ +S++ K + I ++
Sbjct: 501 AIREKMRAINARPIKKVLEAKGRKKFKAAQRLEKLRKKSALLAEDEAMSEKDKAQTIARM 560
Query: 754 YKSAVPKRPKK--EYVVAK---KGVQVRAG--KGKV-LVDPRMKKDSR 793
A+ K+PK+ + VVAK KG+ R KG+ +VD RMKKD R
Sbjct: 561 MSRAMKKKPKQTVKLVVAKGANKGISGRPKGIKGRYKIVDSRMKKDIR 608
>gi|237840609|ref|XP_002369602.1| ftsJ-like methyltransferase domain-containing protein [Toxoplasma
gondii ME49]
gi|211967266|gb|EEB02462.1| ftsJ-like methyltransferase domain-containing protein [Toxoplasma
gondii ME49]
Length = 981
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 116/221 (52%), Positives = 162/221 (73%), Gaps = 5/221 (2%)
Query: 3 KVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGWMQVAV 61
K GK RLDK+Y LAKE GYR+R+++KL+QL +F F +S +V+DLCAAPGGW+QVA
Sbjct: 10 KKTGKQRLDKFYHLAKEQGYRARSAFKLLQLSQRFRLFEKSCASVVDLCAAPGGWLQVAA 69
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ PV + ++G+DLVPI+PIRG + DIT P+C A+++K+++ V DLVLHDGSP
Sbjct: 70 KHCPVATTIVGVDLVPISPIRGVQTFTGDITTPQCAAKLRKLVKFGEV---DLVLHDGSP 126
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
N+G W+ +A SQN LV+ + KLA Q LA TFV+KVFRS DY+++LY L+ LFE+V+
Sbjct: 127 NMGTDWSVDAFSQNVLVLCAAKLACQLLAAGATFVSKVFRSADYAALLYVLQTLFERVDA 186
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGS 221
KP ASR+ SAEI+++ ++ P +D RL D K++F QGS
Sbjct: 187 TKPQASRAVSAEIFVVCRGFRKPPVLDERLFDPKHVFLQGS 227
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 72/136 (52%), Gaps = 10/136 (7%)
Query: 217 LFQGSVEPRK--VVDVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEIL-GSVT 273
+F GS RK +++R + KRHR+G D LR+V++ +F S +P +L
Sbjct: 277 IFFGSRGGRKGQFAELVR-RRLKRHRNG--DLLAGLRRVTV-DEFFRSKDPTTLLVEQAR 332
Query: 274 SITFGDPACS---AIKDHELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKA 330
I F PA + A+++H LTT E A D++VLGK + LLKWR ++KK A
Sbjct: 333 EIFFQTPAVALEEAVRNHRLTTPETLACLADVQVLGKAELAALLKWRFRVKKDVFLALGL 392
Query: 331 TVPASASAPTEGENEE 346
A+A P G N++
Sbjct: 393 RTHAAAEKPPAGANDD 408
>gi|221503392|gb|EEE29090.1| ribosomal RNA methyltransferase, putative [Toxoplasma gondii VEG]
Length = 981
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 116/221 (52%), Positives = 162/221 (73%), Gaps = 5/221 (2%)
Query: 3 KVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGWMQVAV 61
K GK RLDK+Y LAKE GYR+R+++KL+QL +F F +S +V+DLCAAPGGW+QVA
Sbjct: 10 KKTGKQRLDKFYHLAKEQGYRARSAFKLLQLSQRFRLFEKSCASVVDLCAAPGGWLQVAA 69
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ PV + ++G+DLVPI+PIRG + DIT P+C A+++K+++ V DLVLHDGSP
Sbjct: 70 KHCPVATTIVGVDLVPISPIRGVQTFTGDITTPQCAAKLRKLVKFGEV---DLVLHDGSP 126
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
N+G W+ +A SQN LV+ + KLA Q LA TFV+KVFRS DY+++LY L+ LFE+V+
Sbjct: 127 NMGTDWSVDAFSQNVLVLCAAKLACQLLAAGATFVSKVFRSADYAALLYVLQTLFERVDA 186
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGS 221
KP ASR+ SAEI+++ ++ P +D RL D K++F QGS
Sbjct: 187 TKPQASRAVSAEIFVVCRGFRKPPVLDERLFDPKHVFLQGS 227
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 72/136 (52%), Gaps = 10/136 (7%)
Query: 217 LFQGSVEPRK--VVDVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEIL-GSVT 273
+F GS RK +++R + KRHR+G D LR+V++ +F S +P +L
Sbjct: 277 IFFGSRGGRKGQFAELVR-RRLKRHRNG--DLLAGLRRVTV-DEFFRSKDPTTLLVEQAR 332
Query: 274 SITFGDPACS---AIKDHELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKA 330
I F PA + A+++H LTT E A D++VLGK + LLKWR ++KK A
Sbjct: 333 EIFFQTPAVALEEAVRNHRLTTPETLACLADVQVLGKAELAALLKWRFRVKKDVFLALGL 392
Query: 331 TVPASASAPTEGENEE 346
A+A P G N++
Sbjct: 393 RTHAAAEKPPAGANDD 408
>gi|124513798|ref|XP_001350255.1| methyltransferase, putative [Plasmodium falciparum 3D7]
gi|23615672|emb|CAD52664.1| methyltransferase, putative [Plasmodium falciparum 3D7]
Length = 1019
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 136/379 (35%), Positives = 215/379 (56%), Gaps = 62/379 (16%)
Query: 1 MGKVK--GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQ 58
MGK K GK R+DKYY+LAK GYR+R+++KL+Q+ KF+ ++++ ++DLCAAPGGW+Q
Sbjct: 1 MGKKKKVGKERIDKYYKLAKTAGYRARSAFKLIQIAQKFNVFKNANILIDLCAAPGGWLQ 60
Query: 59 VAVQRVPVGSLVLGLDLVPIAPI-RGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117
VA + + S ++G+DLVPI I ++++ DIT +C ++K + D++L+
Sbjct: 61 VAYKNMSKQSTIIGVDLVPIRKIDDNVITIKSDITTSDCIKKIK---NIIKMDKADVILN 117
Query: 118 DGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFE 177
DG+PNVG ++ ++ +QN LV++S+K+A FL G F+TKVFR+++Y S+++ L++LF
Sbjct: 118 DGAPNVGTTYSYDSFNQNVLVLNSIKIAYIFLKKNGIFITKVFRNEEYISLIWVLEKLFG 177
Query: 178 KVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQ- 236
V+ KP +SR S+EIYL+G+ + K+D +L D Y+F + L TKQ
Sbjct: 178 DVKHIKPRSSREISSEIYLVGLNF-LGKKVDKKLFDYTYIFSDQFKKNSNKSSLLETKQE 236
Query: 237 -----------------------------------------KRHRDGYEDGDTTLRKVSL 255
K++R GY+ GD R +
Sbjct: 237 SYLDNNENYFSDEESNDEEKVGEKIDKKKKKGLSTILKEKKKKNRQGYDVGD-DYRATDI 295
Query: 256 ATDFIWSNNPLEILGSVTSITF-------GDPACSAIKD----HELTTEEVKALCDDLRV 304
T FI S+N +++L TF DP I + +E TT+E+ LC+DL+V
Sbjct: 296 CT-FIKSDNYVDLLIKNNKFTFDKNYKNNSDPMIKTIYECIYKNECTTKEIFFLCNDLKV 354
Query: 305 LGKQDFKHLLKWRMQIKKA 323
LGK D +L+KWR +IKK+
Sbjct: 355 LGKSDLYNLIKWRYKIKKS 373
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 109/214 (50%), Gaps = 10/214 (4%)
Query: 564 SEDETQVDKQAEKHSIP-----EKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPA-PGAD 617
S D+ + K+ ++H++P +K +K K +N+V F IV A
Sbjct: 747 SNDDNESIKEIDEHNLPKIPLPDKLAKKEKKKKLKEKYGNNEVKMKNSSFSIVKTDENAQ 806
Query: 618 SSDDSSSDESEDEEVDTKAEILACAKKMLRKKQREQILDDAYNRY--MFDDDGLPDWFLE 675
+ ++ S+ +DE D A I +K++ KK R ++DD++NRY M D+ LPDWFLE
Sbjct: 807 NLNNYFSNLVKDE--DELAFIKCIGEKLIHKKSRMDLIDDSFNRYSYMEDESNLPDWFLE 864
Query: 676 EERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVI 735
EE+++R+ + P+ K+ + K + +I P KKV EAK R ++ + K++K+ K I
Sbjct: 865 EEKKYRRPVIPIDKKILDEYKGKINKITKMPIKKVIEAKMRNRKREITKMKKLEAKIGKI 924
Query: 736 SDQADISDRSKRKQIEQLYKSAVPKRPKKEYVVA 769
D ++ L K+ K+ K Y+V
Sbjct: 925 EKNEDDPFLKQKAITNLLKKNKSDKKRDKSYIVC 958
>gi|118369700|ref|XP_001018053.1| FtsJ-like methyltransferase family protein [Tetrahymena
thermophila]
gi|89299820|gb|EAR97808.1| FtsJ-like methyltransferase family protein [Tetrahymena thermophila
SB210]
Length = 947
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 135/333 (40%), Positives = 202/333 (60%), Gaps = 29/333 (8%)
Query: 5 KGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV 64
KGK R D +Y +AKE+GYRSRA +KL+Q++ K+ FL ++AV+DLCAAPGGW+QVA +
Sbjct: 7 KGKTRKDVHYYMAKEYGYRSRACFKLIQINKKYGFLEKANAVIDLCAAPGGWLQVAAKFC 66
Query: 65 PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVG 124
PV +GLDLVPI PI G + QDIT P +K+ E G +A D+VL+DG+PNVG
Sbjct: 67 PVTCTKIGLDLVPIKPIPGVKTYVQDITAPVTYQLLKR--ELKGGKA-DVVLNDGAPNVG 123
Query: 125 GAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKP 184
W ++A +Q L + ++KLA FL GTFVTKVFRS+DY+++++ + F K+E +KP
Sbjct: 124 ANWQKDAFNQIELTLAALKLAVNFLRRGGTFVTKVFRSKDYNALIWVCNKFFRKIEANKP 183
Query: 185 AASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGS--------VEPRKVVDVLRGTKQ 236
ASR SAEI+++ + P ID +L D KY+F+ + VE +V + + +
Sbjct: 184 KASRFTSAEIFIVCTDFIDPDFIDDKLFDAKYIFKDTEDDYYTQQVE-HEVNSIDKIMAK 242
Query: 237 KRHRDGYEDG--DTTLRKVSLATDFIWSNNPLEILGSVTSITFGD-------PACSAIKD 287
+R R GY D T + ++ +F+ +NP + + SI+F P KD
Sbjct: 243 RRKRVGYGDDVKQTVFQPITFE-EFVNIDNPFAVFLTHNSISFPKDQLEKYIPMTDPPKD 301
Query: 288 HELTTEEVKALCDDLRVLGKQDFKHLLKWRMQI 320
E+ +C+D+ V+GK++ L+KWR +I
Sbjct: 302 WEI-------ICEDILVIGKREIAQLIKWRNKI 327
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 114/205 (55%), Gaps = 20/205 (9%)
Query: 608 FEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQREQILDDAYNRYMFDD- 666
FEIVP + ED ++D AE LA AKKM RK+ RE I+D Y+RY F+D
Sbjct: 746 FEIVP-------------KQEDYDIDNLAETLALAKKMQRKRAREDIIDSTYSRYAFEDQ 792
Query: 667 DGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLE 726
D LP WF+E+E++H P+TKEEI A K + I+ R KK+ EAK R + +K++
Sbjct: 793 DNLPTWFIEDEKQHNFKHLPITKEEIQAEKERLMAINRRAPKKIIEAKIRNYKRMEKKMK 852
Query: 727 KVRKKANVISDQADISDRSKRKQIEQLY-KSAVPKRPKKEYVVAKKGVQVRAGKGKVL-- 783
K + KAN I + IS++ K KQ++ LY K + +K+Y+V KKG GK
Sbjct: 853 KAKNKANQIMETEGISEQMKIKQVKSLYAKEKRGLKQEKKYIVGKKGTA--PGKNSRFVK 910
Query: 784 -VDPRMKKDSRTHGSGKARKGGSKK 807
VD R+KKD + KG K+
Sbjct: 911 HVDNRLKKDRKALSRLYTNKGSRKR 935
>gi|440798353|gb|ELR19421.1| ribosomal RNA large subunit methyltransferase J, putative
[Acanthamoeba castellanii str. Neff]
Length = 777
Score = 246 bits (627), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 171/441 (38%), Positives = 245/441 (55%), Gaps = 64/441 (14%)
Query: 64 VPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNV 123
+PV S+++G+DLVPI PI ++L++DIT P CRA +KK ++ D+V+ DG+PN+
Sbjct: 1 MPVSSVIIGVDLVPIKPIHNVITLQEDITTPRCRAAIKKHLQHWNA---DVVICDGAPNM 57
Query: 124 GGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDK 183
G AW Q+A +Q LV+ ++KLAT FL P GTFVTKVFRS DY+++L+ Q F+KVE K
Sbjct: 58 GKAWIQDAYTQVDLVLKALKLATDFLRPGGTFVTKVFRSADYNALLWVFHQFFKKVEATK 117
Query: 184 PAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQK--RHRD 241
P ASR+ SAEIY++ Y AP KIDPRLLD K++F+ P K D+ K+K ++
Sbjct: 118 PQASRNTSAEIYVVCTHYLAPDKIDPRLLDSKHVFKELDMPLKKPDIFAPVKKKVRANQS 177
Query: 242 GYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDD 301
GYE+G+ TL K +FI + +PL+ S E+KA C D
Sbjct: 178 GYEEGNYTLFKTCSVVEFIEAKDPLDQHAST---------------------EIKACCQD 216
Query: 302 LRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASAS-------AP-TEGENEEDADNRVL 353
L+VL K+DFK+LLKWR++ + E A AP T E EE D +
Sbjct: 217 LKVLNKKDFKNLLKWRLRARSLLHPEEAEEKKKLAEGLEDVEVAPITREEMEEQLDKELE 276
Query: 354 NEMEELKYAMDQRKKREKKLLAKKRAKDKARKATGMQID---VMQDDYTDHELFSLSSIK 410
++M E+ D++KKREKK +++AK + R A GM+ +Q+ D LFS +S+
Sbjct: 277 DKMSEI----DRKKKREKKKERERKAKLRQRAALGMETPGDGGVQEQEVD--LFSAASVL 330
Query: 411 GKKDLAAVEYDD--DDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQ 468
+KD A + D DDV + EDSE+E ++ + YD L+ LD
Sbjct: 331 -RKDAADLLLDQAPDDVLESPEDSEEE---------------NEWAGKNYDSYLDHQLDS 374
Query: 469 AYENYV---AKRGGSTMQRKR 486
Y YV KR T +K+
Sbjct: 375 MYTAYVERTKKRAPPTEPKKK 395
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/201 (41%), Positives = 115/201 (57%), Gaps = 21/201 (10%)
Query: 607 DFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKM-LRKKQREQILDDAYNRYMFD 665
+FE VP +DS SS+ + ++D A LA KK L KK++ + DD YNRY FD
Sbjct: 563 EFEEVPVAPSDSDSSDSSEAEPESDLDEVATTLAIGKKFFLTKKRKREFEDDGYNRYAFD 622
Query: 666 D-DGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRK 724
D D LP W H + +P+TKEE+ MKA+F+E++ RP KKVAEAKARK +K
Sbjct: 623 DRDELPPW-------HNKPQKPITKEEVEEMKAKFRELNERPIKKVAEAKARKHLRMQKK 675
Query: 725 LEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPK----RPKKEYVVAKKGVQVRAGKG 780
+EK+++KA I+ +S+R K K I L K + K + Y+V KK ++ KG
Sbjct: 676 VEKMKQKAAKIATADGMSEREKIKSIRTLQKHTLGKAGDAKAAPVYIVRKKHQTAQSQKG 735
Query: 781 -------KV-LVDPRMKKDSR 793
KV +VDPR+KKD R
Sbjct: 736 PSAGKKAKVKIVDPRLKKDKR 756
>gi|323456843|gb|EGB12709.1| hypothetical protein AURANDRAFT_52052 [Aureococcus anophagefferens]
Length = 947
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 145/349 (41%), Positives = 213/349 (61%), Gaps = 24/349 (6%)
Query: 2 GKVKGKH--RLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRS-SHAVLDLCAAPGGWMQ 58
G K KH R DK+Y LAKE GYRSRA++KL ++ +F + + + VLDLCAAPGGW Q
Sbjct: 4 GLKKRKHVDRNDKWYVLAKEQGYRSRAAFKLAHINKEFDIIGAKTRVVLDLCAAPGGWAQ 63
Query: 59 VAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDIT--------KPECRARVKKVMEEHG-- 108
VA + G+ V+ +DL+PI PI ++ DIT K E R + K ++ G
Sbjct: 64 VAAKAAGRGAAVIAVDLLPIRPIPNVRTIVGDITMDTTHQHVKREAREALAKFRDDDGEG 123
Query: 109 --VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQF-LAPKGTFVTKVFRSQDY 165
R D+VL DG+PNVG A+ ++A QN + + ++K + L G+FVTKV+R QDY
Sbjct: 124 RAGRHVDVVLCDGAPNVGAAYNKDAFVQNEIALLALKCGVECGLRRGGSFVTKVYRGQDY 183
Query: 166 SSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF---QGSV 222
+++ + +LFE+V KPA+SR+ SAEI+++ Y AP K+DP+LLD K++F G +
Sbjct: 184 NALTWAFGRLFERVRATKPASSRAQSAEIFVVCSGYLAPQKVDPKLLDPKHVFGELGGGL 243
Query: 223 EPRKVVDVL--RGTKQKRHRDGYEDGDTTLRKVSLAT--DFIWSNNPLEILGSVTSITFG 278
+ K + VL + K+KR R GY D D+ L + T F+ +P +IL ++I F
Sbjct: 244 DDAKPLGVLHPQAGKKKRQRQGYADNDSGLLVMPTMTALQFLRHADPAQILAERSAIVF- 302
Query: 279 DPACSAIKDHELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSA 327
D A A+ H+ TT EV+A +DL+VL K DF+ LLKWR +++KA + A
Sbjct: 303 DGAPDAVCQHKATTAEVRACGEDLKVLSKGDFRVLLKWREKLRKADAHA 351
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 111/199 (55%), Gaps = 17/199 (8%)
Query: 627 SEDEEVDTKAEILACAKKMLRKKQREQILDDAYNRYMFDDD-GLPDWFLEEERRHRQAIR 685
S+ E+ D KAE LA A MLRK + ++++D +YNRY ++D LP WFL++E+RH +
Sbjct: 747 SDSEDDDDKAETLALATMMLRKSKAKELVDASYNRYAWNDPKDLPSWFLDDEKRHYRPQL 806
Query: 686 PVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRS 745
P+ +A MK +F+ + A+P KVAEA+ARKK A +L+ ++KA +++ D+S
Sbjct: 807 PIKPALLAEMKQRFQNLAAKPIAKVAEARARKKTRADARLKAAKRKAEAVANDPDMSAGR 866
Query: 746 KRKQIEQLYKSAVPK--RPKKEYVVAKKGVQVR---------AGKGK--VLVDPRMKKDS 792
K K++E+ + RP K YVVA K A KG V VD RMK D
Sbjct: 867 KLKEVEKAMARGTARDARPDKIYVVASKSKSGVKKKTSAPKGAAKGSRVVTVDKRMKADK 926
Query: 793 RTHGSGKARK---GGSKKG 808
R + RK G K+G
Sbjct: 927 RAIKAQDKRKKKFGSGKRG 945
>gi|392512772|emb|CAD25667.2| rRNA METHYL-TRANSFERASE [Encephalitozoon cuniculi GB-M1]
Length = 550
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 165/497 (33%), Positives = 262/497 (52%), Gaps = 77/497 (15%)
Query: 1 MGKVK--GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQ 58
MGK K GK RLDKYY LAKE GYR+R+++KL+Q++ K+ FL +H ++DLCAAPG W Q
Sbjct: 1 MGKSKSTGKTRLDKYYSLAKEKGYRARSAFKLLQMNRKYGFLEDAHVLIDLCAAPGSWSQ 60
Query: 59 VAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
VA Q +P+ ++ +DL PI I ++ +DIT ECR ++++++ H D+VLHD
Sbjct: 61 VAAQEMPLRRKIVAIDLEPIKFIGDVDTIVEDITTDECRLKLREILGTHKA---DVVLHD 117
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+PNVG +W +A +QN LV+ S +LA +FL G FVTKVFRSQDY S+L L QLF
Sbjct: 118 GAPNVGTSWENDAFNQNLLVLHSARLAAEFLRKGGVFVTKVFRSQDYFSLLNVLSQLFGS 177
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKR 238
VE KP +SRS SAEI+L+ + + +D +L+ +F+ + +
Sbjct: 178 VETSKPLSSRSQSAEIFLVCLGFIGEEDVDYSILEASAVFE----------------EMK 221
Query: 239 HRDGYEDGDTTLRKVSLATDFIWSNNPL---EILGSVTSITFG-DPA--CSAIKDHELTT 292
GY+ D K T+F+ ++P+ E+L + I DP C ++ L
Sbjct: 222 GAGGYD--DFNFHKTLKLTEFLREDDPVVLSEMLLKYSEIEIDIDPGDVCKVLEPEFLD- 278
Query: 293 EEVKALCDDLRVLGKQDFKHLLKWRMQIKKA-----FSSAEKATVPASASAPTEGENEED 347
L DL++LGK D + +L+ R +I K AE A + S+ P E E
Sbjct: 279 -----LFKDLQLLGKGDIRKILRKRSKIVKGVQRGEIDVAELAFLRNSSDVP---ETEMK 330
Query: 348 ADNRVLNEMEELKYAMDQRKKREK------------------------KLLAKKRAKDKA 383
A + V ++EE++ +++++K+E K++ + K
Sbjct: 331 AKS-VEEKIEEIQMLLEKKRKKESRGDRMAKSGKEIGCFFKDSIFDRLKMVGEDEEVGKE 389
Query: 384 RKATGMQIDVMQD--DYTDHELFSLSSIKGKKDLAAVEYDDDDVNAAAEDSEDERPN--R 439
+ T +++ D D + E+ ++ +K ++ E+ +D ++ A D ++ PN R
Sbjct: 390 NEQT-IEVSSCSDSLDLDEEEMMCVAKLKENRE----EFIEDTIDRYARDPNEKLPNYLR 444
Query: 440 DTQEHVSSDIDSDEERR 456
+ QE S +EERR
Sbjct: 445 EDQEAFYSRPPKNEERR 461
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 26/166 (15%)
Query: 632 VDTKAEILACAKKMLRKKQREQILDDAYNRYMFD-DDGLPDWFLEEERRHRQAIRPVTKE 690
+D E + C K+ K+ RE+ ++D +RY D ++ LP++ E++ RP E
Sbjct: 403 LDLDEEEMMCVAKL--KENREEFIEDTIDRYARDPNEKLPNYLREDQEAFYS--RPPKNE 458
Query: 691 EIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQI 750
E R +KK EA +R+K A R+ E + K VI D + + K
Sbjct: 459 E------------RRLSKKEREALSRRKSRAERRAE-IFMKDLVIDDSEE-----EGKVA 500
Query: 751 EQLYKSAVPK-RPKKEYVVAKKG-VQVRAGKGK-VLVDPRMKKDSR 793
+++Y+S+ K + K V KKG V GKGK V++D R+KKD R
Sbjct: 501 KKIYRSSFKKTKAKPRIVFPKKGTCGVPHGKGKLVMLDKRLKKDKR 546
>gi|19074557|ref|NP_586063.1| rRNA METHYL-TRANSFERASE [Encephalitozoon cuniculi GB-M1]
Length = 573
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 165/497 (33%), Positives = 263/497 (52%), Gaps = 77/497 (15%)
Query: 1 MGKVK--GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQ 58
MGK K GK RLDKYY LAKE GYR+R+++KL+Q++ K+ FL +H ++DLCAAPG W Q
Sbjct: 24 MGKSKSTGKTRLDKYYSLAKEKGYRARSAFKLLQMNRKYGFLEDAHVLIDLCAAPGSWSQ 83
Query: 59 VAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
VA Q +P+ ++ +DL PI I ++ +DIT ECR ++++++ H D+VLHD
Sbjct: 84 VAAQEMPLRRKIVAIDLEPIKFIGDVDTIVEDITTDECRLKLREILGTHKA---DVVLHD 140
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+PNVG +W +A +QN LV+ S +LA +FL G FVTKVFRSQDY S+L L QLF
Sbjct: 141 GAPNVGTSWENDAFNQNLLVLHSARLAAEFLRKGGVFVTKVFRSQDYFSLLNVLSQLFGS 200
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKR 238
VE KP +SRS SAEI+L+ + + +D +L+ +F+ + +
Sbjct: 201 VETSKPLSSRSQSAEIFLVCLGFIGEEDVDYSILEASAVFE----------------EMK 244
Query: 239 HRDGYEDGDTTLRKVSLATDFIWSNNPL---EILGSVTSITFG-DP--ACSAIKDHELTT 292
GY+D + K T+F+ ++P+ E+L + I DP C ++ L
Sbjct: 245 GAGGYDDFN--FHKTLKLTEFLREDDPVVLSEMLLKYSEIEIDIDPGDVCKVLEPEFLD- 301
Query: 293 EEVKALCDDLRVLGKQDFKHLLKWRMQIKKA-----FSSAEKATVPASASAPTEGENEED 347
L DL++LGK D + +L+ R +I K AE A + S+ P E E
Sbjct: 302 -----LFKDLQLLGKGDIRKILRKRSKIVKGVQRGEIDVAELAFLRNSSDVP---ETEMK 353
Query: 348 ADNRVLNEMEELKYAMDQRKKREK------------------------KLLAKKRAKDKA 383
A + V ++EE++ +++++K+E K++ + K
Sbjct: 354 AKS-VEEKIEEIQMLLEKKRKKESRGDRMAKSGKEIGCFFKDSIFDRLKMVGEDEEVGKE 412
Query: 384 RKATGMQIDVMQD--DYTDHELFSLSSIKGKKDLAAVEYDDDDVNAAAEDSEDERPN--R 439
+ T +++ D D + E+ ++ +K ++ E+ +D ++ A D ++ PN R
Sbjct: 413 NEQT-IEVSSCSDSLDLDEEEMMCVAKLKENRE----EFIEDTIDRYARDPNEKLPNYLR 467
Query: 440 DTQEHVSSDIDSDEERR 456
+ QE S +EERR
Sbjct: 468 EDQEAFYSRPPKNEERR 484
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 26/166 (15%)
Query: 632 VDTKAEILACAKKMLRKKQREQILDDAYNRYMFD-DDGLPDWFLEEERRHRQAIRPVTKE 690
+D E + C K+ K+ RE+ ++D +RY D ++ LP++ E++ RP E
Sbjct: 426 LDLDEEEMMCVAKL--KENREEFIEDTIDRYARDPNEKLPNYLREDQEAFYS--RPPKNE 481
Query: 691 EIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQI 750
E R +KK EA +R+K A R+ E + K VI D + + K
Sbjct: 482 E------------RRLSKKEREALSRRKSRAERRAE-IFMKDLVIDDSEE-----EGKVA 523
Query: 751 EQLYKSAVPK-RPKKEYVVAKKG-VQVRAGKGK-VLVDPRMKKDSR 793
+++Y+S+ K + K V KKG V GKGK V++D R+KKD R
Sbjct: 524 KKIYRSSFKKTKAKPRIVFPKKGTCGVPHGKGKLVMLDKRLKKDKR 569
>gi|397640151|gb|EJK73961.1| hypothetical protein THAOC_04392, partial [Thalassiosira oceanica]
Length = 391
Score = 239 bits (609), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 136/355 (38%), Positives = 199/355 (56%), Gaps = 44/355 (12%)
Query: 8 HRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP-- 65
H DKYYRLAKE GYRSRA++KL Q++ KF L + VLDLCAAPGGW QV + +P
Sbjct: 11 HDKDKYYRLAKEQGYRSRAAFKLTQINRKFRVLNGARTVLDLCAAPGGWTQVCARSLPND 70
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
+ ++ +D+ PI P+R ++L DIT + +A ++ ++ G D+VL DG+PNVG
Sbjct: 71 PSTTIVAVDVHPIRPMRNVMTLVGDITTEKTKAAIRAELQGAGC---DVVLCDGAPNVGA 127
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
++ ++A QN L + +K AT+ L GTFVTK++RS DYS+ L+ KQ F + + KPA
Sbjct: 128 SYDKDAYEQNELALHCLKCATEHLKRHGTFVTKLYRSADYSAYLWVAKQFFRECQAVKPA 187
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ---------------GSVEPRKVVDV 230
ASRS SAEI+L+ Y AP KID R+ D + +F+ G + +
Sbjct: 188 ASRSQSAEIFLVCQGYVAPDKIDQRMFDPRCVFEQTDGAATGGGDKAQTGEKAAKMNIFH 247
Query: 231 LRGTKQKRHRDGYEDG--DTTLRKVSLATDFIWSN---NPLEILGSVTSITFG------- 278
K+ R R+GY+ D ++RK+ DF+ +P+++L + + F
Sbjct: 248 KEYGKRVRSRNGYDMTGLDASMRKIGSVRDFLEGGSEYDPIQMLSDCSGLAFKCQVCKDV 307
Query: 279 ----------DPACSA--IKDHELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIK 321
DP CS +H LT+ EVK DL+VL K DFK LL WR +++
Sbjct: 308 PRPKEGEEPVDPGCSCRWYLEHRLTSPEVKTCLSDLKVLNKADFKALLTWREKVR 362
>gi|303283660|ref|XP_003061121.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457472|gb|EEH54771.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 197
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 111/199 (55%), Positives = 152/199 (76%), Gaps = 2/199 (1%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
DK+Y LAKE G+RSRA++KLVQL+ K+ F + A +DLCAAPGGW+QVAV+ +P+ S +
Sbjct: 1 DKFYYLAKEQGFRSRAAFKLVQLNRKYDFFSGARACMDLCAAPGGWLQVAVKYMPMSSTI 60
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL PI IRG + DIT CRA++K+V + GV+ +D+V+HDG+PNVGG +A E
Sbjct: 61 VGVDLAPIKAIRGCTTFVDDITTQSCRAQLKRVTPD-GVK-YDVVMHDGAPNVGGNFAAE 118
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ +Q AL +DS++LAT+FL G FVTKVFRS +Y ++LY ++QLF+KVE KP ASR
Sbjct: 119 SYTQAALTLDSLRLATEFLREGGWFVTKVFRSTEYHALLYSMQQLFKKVESTKPVASRGT 178
Query: 191 SAEIYLLGIKYKAPAKIDP 209
SAEIY++ I Y AP+KIDP
Sbjct: 179 SAEIYVVCIGYLAPSKIDP 197
>gi|385305187|gb|EIF49177.1| et-dependent methyltransferase involved in rrna processing and 60s
ribosomal subunit maturation [Dekkera bruxellensis
AWRI1499]
Length = 305
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 125/307 (40%), Positives = 196/307 (63%), Gaps = 12/307 (3%)
Query: 1 MGKVKGKH---RLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAVLDLCAAPGGW 56
MG+++ K+ RLD+YY LAKE GYR+R+S+KL+Q++ K+ FL S V+DLCAAPG W
Sbjct: 1 MGRIQKKNAKGRLDRYYYLAKEKGYRARSSFKLLQINEKYGHFLEKSKVVVDLCAAPGSW 60
Query: 57 MQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
QVA + PV SL++G+D+V + P+ ++ + DIT +CR++++ ++ V D VL
Sbjct: 61 CQVASELCPVNSLIVGVDIVQMKPLPKCITFQSDITTDDCRSKLRGYLKTWKV---DTVL 117
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
HDG+PNVG W Q+A Q+ L +++++LA + L P GTFVTKVFRS+DY+++++ KQLF
Sbjct: 118 HDGAPNVGLNWIQDAYGQSRLTLEALRLAVEHLTPGGTFVTKVFRSRDYNNLIWVFKQLF 177
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVE-PRKV-VDVLRGT 234
+ VE KP ASR+ SAEI+++ ++KAP K+DP+ LD K +F+ E P+ V
Sbjct: 178 DHVEATKPPASRNVSAEIFVVCKRFKAPKKLDPKFLDPKAVFEELPEGPQNNEAKVYNPE 237
Query: 235 KQKRHRDGYEDGDTT-LRKVSLATDFIWSNNPLEILGSVTSITF--GDPACSAIKDHELT 291
+KR R+GY++ D T + L + + LGS+++ +P +K + T
Sbjct: 238 VKKRRREGYDENDWTHFHPIKLMDWVHQEEDVVNTLGSISAFEIEKNNPEWKIVKXMKQT 297
Query: 292 TEEVKAL 298
T E +
Sbjct: 298 TAEFSGM 304
>gi|118404228|ref|NP_001072428.1| FtsJ homolog 3 [Xenopus (Silurana) tropicalis]
gi|113197746|gb|AAI21673.1| FtsJ homolog 3 [Xenopus (Silurana) tropicalis]
Length = 298
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 120/271 (44%), Positives = 175/271 (64%), Gaps = 4/271 (1%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R DK+Y LAKE GYRSR+++KL+QL+ KF FL + A++DLCAAPGGW+QVA + +P
Sbjct: 8 GKSRKDKFYHLAKETGYRSRSAFKLIQLNRKFQFLPKARALVDLCAAPGGWLQVAAKFMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
+ SL++G+DLVPI PI ++L++DIT CR V+K ++ D+VL+DG+PNVG
Sbjct: 68 ISSLIIGVDLVPIKPIPKVLTLQEDITTEACRQTVRKHLQTWKA---DVVLNDGAPNVGA 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
W +A SQ L + +++LA L+ G F+TK+FRS DY S+L+ L+Q F+KV KP
Sbjct: 125 NWTHDAFSQVHLSLMALRLACDCLSRGGWFITKIFRSSDYQSLLWILQQFFKKVNSTKPQ 184
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRHRDGYED 245
ASRS SAEI+++ + AP KID R D K+ F+ P + V L K+ + +GY
Sbjct: 185 ASRSESAEIFVVCQGFLAPDKIDTRFFDPKFAFKDVDGPVQTVSQLLSHKKPK-AEGYAA 243
Query: 246 GDTTLRKVSLATDFIWSNNPLEILGSVTSIT 276
+L + DF+ NP++ L + +T
Sbjct: 244 TSLSLYHRASLVDFLTVENPVDFLSKTSEVT 274
>gi|449329526|gb|AGE95797.1| rRNA methyl-transferase [Encephalitozoon cuniculi]
Length = 573
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 166/496 (33%), Positives = 264/496 (53%), Gaps = 75/496 (15%)
Query: 1 MGKVK--GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQ 58
MGK K GK RLDKYY LAKE GYR+R+++KL+Q++ K+ FL +H ++DLCAAPG W Q
Sbjct: 24 MGKSKSTGKTRLDKYYSLAKEKGYRARSAFKLLQMNRKYGFLEDAHVLIDLCAAPGSWSQ 83
Query: 59 VAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
VA Q +P+ ++ +DL PI I ++ +DIT ECR ++++++ H D+VLHD
Sbjct: 84 VAAQEMPLRRKIVAIDLEPIKFIGDVDTIVEDITTDECRLKLREILGTHKA---DVVLHD 140
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+PNVG +W +A +QN LV+ S +LA +FL G FVTKVFRSQDY S+L L QLF
Sbjct: 141 GAPNVGTSWENDAFNQNLLVLHSARLAAEFLRKGGVFVTKVFRSQDYFSLLNVLSQLFGS 200
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKR 238
VE KP +SRS SAEI+L+ + + +D +L+ +F+ + +
Sbjct: 201 VETSKPLSSRSQSAEIFLVCLGFIGEEDVDYSILEASAVFE----------------EMK 244
Query: 239 HRDGYEDGDTTLRKVSLATDFIWSNNPL---EILGSVTSITFG-DPA-CSAIKDHELTTE 293
GY DG + + L T+F+ ++P+ E+L + I DP S + + E
Sbjct: 245 GAGGY-DGFNFHKTLKL-TEFLREDDPVVLSEMLLKYSEIEIDIDPGDVSKVLEPEFLD- 301
Query: 294 EVKALCDDLRVLGKQDFKHLLKWRMQIKKA-----FSSAEKATVPASASAPTEGENEEDA 348
L DL++LGK D + +L+ R +I K AE A + S+ P E E A
Sbjct: 302 ----LFKDLQLLGKGDIRKILRKRSKIVKGVQRGEIDVAELAFLRNSSDVP---ETEMKA 354
Query: 349 DNRVLNEMEELKYAMDQRKKREK------------------------KLLAKKRAKDKAR 384
+ V ++EE++ +++++K+E K++ + K
Sbjct: 355 KS-VEEKIEEIQMLLEKKRKKESRGDRMAKSGKEIGCFFKDSIFDRLKMVGEDEEVGKEN 413
Query: 385 KATGMQIDVMQD--DYTDHELFSLSSIKGKKDLAAVEYDDDDVNAAAEDSEDERPN--RD 440
+ T +++ D D + E+ ++ +K ++ E+ +D ++ A D ++ PN R+
Sbjct: 414 EQT-IEVSSCSDSLDLDEEEMMCVAKLKENRE----EFIEDTIDRYARDPNEKLPNYLRE 468
Query: 441 TQEHVSSDIDSDEERR 456
QE S +EERR
Sbjct: 469 DQEAFYSRPPKNEERR 484
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 26/166 (15%)
Query: 632 VDTKAEILACAKKMLRKKQREQILDDAYNRYMFD-DDGLPDWFLEEERRHRQAIRPVTKE 690
+D E + C K+ K+ RE+ ++D +RY D ++ LP++ E++ RP E
Sbjct: 426 LDLDEEEMMCVAKL--KENREEFIEDTIDRYARDPNEKLPNYLREDQEAFYS--RPPKNE 481
Query: 691 EIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQI 750
E R +KK EA +R+K A R+ E + K VI D + + K
Sbjct: 482 E------------RRLSKKEREALSRRKSRAERRAE-IFMKDLVIDDSEE-----EGKVA 523
Query: 751 EQLYKSAVPK-RPKKEYVVAKKG-VQVRAGKGK-VLVDPRMKKDSR 793
+++Y+S+ K + K V KKG V GKGK V++D R+KKD R
Sbjct: 524 KKIYRSSFKKTKAKPRIVFPKKGTCGVPHGKGKLVMLDKRLKKDKR 569
>gi|255079048|ref|XP_002503104.1| predicted protein [Micromonas sp. RCC299]
gi|226518370|gb|ACO64362.1| predicted protein [Micromonas sp. RCC299]
Length = 200
Score = 235 bits (600), Expect = 7e-59, Method: Composition-based stats.
Identities = 112/201 (55%), Positives = 153/201 (76%), Gaps = 2/201 (0%)
Query: 9 RLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGS 68
R DK+Y LAKE G+RSRAS+KLVQL+ K+ F + A +DLCAAPGGW+QVA + +P+ S
Sbjct: 2 RTDKFYYLAKEQGFRSRASFKLVQLNRKYDFFSGARACMDLCAAPGGWLQVAQKYMPMSS 61
Query: 69 LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWA 128
L++G+DL PI PIRG + DIT CRA++++V E G + +D+V++DG+PNVGG +A
Sbjct: 62 LIVGVDLAPIKPIRGCTTFVDDITTQSCRAQLRRVTPE-GTK-YDIVMNDGAPNVGGNFA 119
Query: 129 QEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASR 188
E+ +Q AL +DS++LA++FL G FVTKVFRS +Y ++LY ++QLF+KVE KP ASR
Sbjct: 120 AESYTQAALTLDSLRLASEFLREGGWFVTKVFRSTEYHALLYSMQQLFKKVESTKPVASR 179
Query: 189 SASAEIYLLGIKYKAPAKIDP 209
SAEIY++ I Y APAKIDP
Sbjct: 180 GTSAEIYVVCIGYLAPAKIDP 200
>gi|303390043|ref|XP_003073253.1| 23S rRNA methyl-transferase [Encephalitozoon intestinalis ATCC
50506]
gi|303302398|gb|ADM11893.1| 23S rRNA methyl-transferase [Encephalitozoon intestinalis ATCC
50506]
Length = 550
Score = 233 bits (595), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 136/338 (40%), Positives = 200/338 (59%), Gaps = 28/338 (8%)
Query: 1 MGKVK--GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQ 58
MGK K G+ RLDKYY LAKE GYR+R+++KL+Q++ K++FL +H ++DLCAAPG W Q
Sbjct: 1 MGKSKSTGRTRLDKYYNLAKEKGYRARSAFKLLQINRKYAFLEKAHVLIDLCAAPGSWCQ 60
Query: 59 VAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
VA Q +P+ ++ +DL PI + ++ DIT ECR R+++++ H D+VLHD
Sbjct: 61 VAAQEMPLRRKIVAVDLEPIKFMGDVDTITADITSDECRLRLREILGTHKA---DVVLHD 117
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+PNVG +W +A +QN LV+ S +L +FL G FVTKVFRSQDY S+L L QLFE
Sbjct: 118 GAPNVGTSWENDAFNQNLLVLHSARLTAEFLKKGGVFVTKVFRSQDYFSLLNILSQLFET 177
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKR 238
VE KP +SRS SAEI+L+ + + ++D +LD +F + +
Sbjct: 178 VETSKPLSSRSQSAEIFLVCLGFIGEEEVDYSILDPSAVFT----------------EMK 221
Query: 239 HRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSA-IKDHELTTE-EVK 296
GYED + +K+ L T+F+ NP EIL + + + + KD E E E
Sbjct: 222 ETGGYEDFNFH-KKLKL-TEFLKEENP-EILSEML-LKYSEIVVDIDEKDIEKILEPEFL 277
Query: 297 ALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPA 334
L DL++LGK + + +L R +I +A + +PA
Sbjct: 278 YLFKDLQLLGKGEVRKILAKRKKIIRAVRKGD-VDIPA 314
>gi|440491658|gb|ELQ74280.1| Putative SAM-dependent rRNA methyltransferase SPB1
[Trachipleistophora hominis]
Length = 553
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 137/371 (36%), Positives = 209/371 (56%), Gaps = 44/371 (11%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQR-V 64
GK RLDKYY LAKE GYR+R+++KL+QL+ KF+FL+S +V+DLC APGGW+QVAVQ +
Sbjct: 8 GKKRLDKYYHLAKEQGYRARSAYKLIQLNKKFNFLQSCSSVVDLCCAPGGWLQVAVQHNI 67
Query: 65 PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVG 124
P ++G+DL PI I S+ DIT VK+++ G D VLHDG+PNVG
Sbjct: 68 PD---IIGVDLYPIKKINNVKSIVGDIT---LSGTVKEILNIAG--ETDCVLHDGAPNVG 119
Query: 125 GAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKP 184
W Q+A QN LV+ ++K++T+ L G F+TKVFRS+DY S+L+ L QLFE V KP
Sbjct: 120 VCWEQDAFEQNELVLHAIKISTKILKKDGIFLTKVFRSKDYFSILWVLNQLFESVVSTKP 179
Query: 185 AASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRHRDGYE 244
+SR SAEI++ YK PAKID + D ++F+ +
Sbjct: 180 ISSREQSAEIFVFCRGYKKPAKIDDKFFDANHVFKE-----------------------K 216
Query: 245 DGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLRV 304
+ + KV ++F S +P +L + + + + D ++ + K + DDL+
Sbjct: 217 EINENCYKVIKFSEFFNSEDPKSVLETYSKMLID--VKGELFD-KVFDQNYKTMLDDLKQ 273
Query: 305 LGKQDFKHLLKWRMQIKKAFSSAEKAT---VPASASAPTEGENEEDADNRVLNEMEELKY 361
+GK D K +LK R ++ K + E VP + + E E++ +++++K
Sbjct: 274 IGKHDMKKILKKREKLIKYIQNGEYIEGLDVPVKETVVSLDELPEES------KLDQIKR 327
Query: 362 AMDQRKKREKK 372
M ++++ EKK
Sbjct: 328 EMKKKQRDEKK 338
>gi|378754417|gb|EHY64450.1| FtsJ cell division protein [Nematocida sp. 1 ERTm2]
Length = 568
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 145/413 (35%), Positives = 216/413 (52%), Gaps = 54/413 (13%)
Query: 1 MGKVK-------GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAP 53
MGKV GK RLDKYY LAKEHGYR+R+++KL+QL+ F+ L + H +DLCAAP
Sbjct: 1 MGKVGPARKQKVGKARLDKYYFLAKEHGYRARSAFKLIQLNQSFNLLSNIHTAVDLCAAP 60
Query: 54 GGWMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFD 113
GGW+QV + V S ++G+DL PI I G +++ DIT C V +M G D
Sbjct: 61 GGWLQVLSKTVRPPSKIVGVDLDPIKAIHGVHTIQGDITDKHC---VSDIMSAVGETEID 117
Query: 114 LVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLK 173
LVLHDG+PNVG +W +++ QN LV + KLA + L GTFVTKVFRS+D++S+++
Sbjct: 118 LVLHDGAPNVGASWERDSYVQNELVCHAAKLACKILRKNGTFVTKVFRSKDFNSLVWMCS 177
Query: 174 QLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRG 233
QLF + KP +SR SAE +L+ YK P +D R D +LF E +VV
Sbjct: 178 QLFTECITTKPRSSRDESAEAFLVCRGYKKPESLDERFFDPLFLF---AEKDEVVAA--- 231
Query: 234 TKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPA-CSAIKDHELTT 292
NN ILG +T +KD +
Sbjct: 232 ----------------------------ENNLSSILGDRIDLTHCTKVNIDCMKD--MID 261
Query: 293 EEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRV 352
EE L DL+V+G+ D + L++ +I+KA+ ++P E ++ R
Sbjct: 262 EETAILLSDLQVVGEADRRRLVRTLKKIQKAYIGVH------GKNSPEEVQDLRTPAERQ 315
Query: 353 LNEMEELKYAMDQRKK-REKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELF 404
E++ ++ AMD+R+K ++K+LAK+ + +I+ + D+ + +F
Sbjct: 316 EAELQSVRRAMDRREKILQRKILAKRTKSLGLTEQDIEEIEKVHGDFFEDNIF 368
Score = 39.7 bits (91), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 96/201 (47%), Gaps = 29/201 (14%)
Query: 617 DSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQREQILDDAYNRYMFDDD-GLPDWFLE 675
D+ +D + E++ + E C + LRK + E D +RY++DDD LP +F
Sbjct: 391 DAEEDQTDSEADSCSSSLEIEDKVCGYR-LRKDEDEF---DGIDRYVYDDDENLPHFFKN 446
Query: 676 EERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVI 735
+E ++ + R V E+ + E +KK+ E KAR+ R RKL+K++++
Sbjct: 447 DEAKYNK--RYVFDEKRDDL-----ERKVTVSKKLEEMKARRMRRVERKLKKIKERLEEG 499
Query: 736 SDQADISDRSKRKQIEQLYKSAV--PKRPKKEYVVAKKGVQVRAG-KGKV-LVDPRMKKD 791
+ D+ RS R KSA+ KR K + V A V G KG+ + D RMKKD
Sbjct: 500 CEDVDL--RSIR-------KSAMKKEKREKPKIVFAGPSKTVAKGIKGRFKMTDRRMKKD 550
Query: 792 SRTHGSGKARKGGSKKGNIGK 812
+G R KKG G+
Sbjct: 551 K----AGLKRAEERKKGKGGR 567
>gi|269861051|ref|XP_002650241.1| 23S rRNA methylase [Enterocytozoon bieneusi H348]
gi|220066331|gb|EED43817.1| 23S rRNA methylase [Enterocytozoon bieneusi H348]
Length = 556
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 124/322 (38%), Positives = 186/322 (57%), Gaps = 34/322 (10%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
M VK K R+D+YYRLAKE GYRSRA++KL++L+ K++FL+ +DLCAAPGGW+Q+
Sbjct: 1 MAVVK-KQRIDEYYRLAKERGYRSRAAFKLLELNKKYNFLKDCRIAIDLCAAPGGWLQIL 59
Query: 61 VQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
+Q +P ++G+DL I + + DIT ECR + +++ + D+V+HDG+
Sbjct: 60 MQEMPPTRKIIGIDLDKIERCGDCHTFQSDITTQECRRELICLLDNNKA---DIVVHDGA 116
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
PN G +++ QN LV+ ++KLAT+FL G FVTK+ RS+++ +L L+ LF+ V
Sbjct: 117 PNFGNDPSKDIFIQNDLVLSALKLATEFLKTNGIFVTKIHRSENFVKILNLLRSLFKHVT 176
Query: 181 VDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRHR 240
+ KP +SR+ SAE Y + YK P I+PRL D YLF ++D
Sbjct: 177 ITKPLSSRTTSAETYAVCRLYKNPDTIEPRLFDANYLFNND-----IID----------N 221
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD 300
D Y K L +DFI S++P+ +L + IT D C+ L T E K
Sbjct: 222 DEY--------KTILLSDFICSSDPINLLKTSGKITI-DFECN------LLTSEEKEYFK 266
Query: 301 DLRVLGKQDFKHLLKWRMQIKK 322
DL++LG + + L+K R +I K
Sbjct: 267 DLKILGYDELRQLIKLRHKIVK 288
>gi|402468079|gb|EJW03280.1| 23S rRNA (uridine(2552)-2'-O-)-methyltransferase [Edhazardia aedis
USNM 41457]
Length = 516
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 111/221 (50%), Positives = 152/221 (68%), Gaps = 7/221 (3%)
Query: 1 MGKVK-GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQV 59
MG+ K GK RLDKYY LAKEHGYR+R+++KLVQL+ K+ L+ ++ V+DLCAAPGGW+QV
Sbjct: 1 MGRKKVGKQRLDKYYHLAKEHGYRARSAFKLVQLNKKYGLLQCNN-VVDLCAAPGGWLQV 59
Query: 60 AVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPE-CRARVKKVMEEHGVRAFDLVLHD 118
+PV ++G+DL PI PI G +L DIT + C ++ +++ DLVLHD
Sbjct: 60 LNNELPVMRQIVGIDLCPIKPIPGVSTLVCDITHIDICLKEIRNILD----GPCDLVLHD 115
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+PNVG W +A QN LV+ ++ LA + L GTFV+KVFRS+DYSS+L+ QLF+
Sbjct: 116 GAPNVGTDWTIDAYQQNELVLSAMNLACKLLRKNGTFVSKVFRSKDYSSLLWLFNQLFDD 175
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ 219
V V KP ASR+ SAEIY++ +K P KIDP + D +F+
Sbjct: 176 VSVTKPLASRNESAEIYIVAKNFKRPDKIDPDMFDPNKIFE 216
>gi|71396836|ref|XP_802426.1| FtsJ cell division protein [Trypanosoma cruzi strain CL Brener]
gi|70862921|gb|EAN80980.1| FtsJ cell division protein, putative [Trypanosoma cruzi]
Length = 211
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 106/205 (51%), Positives = 147/205 (71%), Gaps = 3/205 (1%)
Query: 5 KGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV 64
K K RLD YYRLAK+ G+R+R+++KL+QL+ K+ FL S ++DLCAAPGGW QVA + +
Sbjct: 8 KAKTRLDAYYRLAKDQGFRARSAFKLIQLNRKYDFLAKSRVLVDLCAAPGGWCQVAAKHM 67
Query: 65 PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVG 124
PVGS ++G+DLVPIAPIRG + DIT + R + +++ V D V+HDG+PNVG
Sbjct: 68 PVGSKIVGVDLVPIAPIRGVKTFVGDITDDKTRKMIVTYLKKEPV---DCVIHDGAPNVG 124
Query: 125 GAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKP 184
G W+++ QNALV+ + K+A L P G FVTKVFRSQD+ +++ LKQLF+KVE KP
Sbjct: 125 GVWSRDLFEQNALVLHAAKMAASMLKPSGWFVTKVFRSQDFHKLMWVLKQLFDKVEATKP 184
Query: 185 AASRSASAEIYLLGIKYKAPAKIDP 209
ASR SAEI+++ +KA ++DP
Sbjct: 185 LASRMESAEIFVVCAGFKAQKQLDP 209
>gi|396081764|gb|AFN83379.1| 23S rRNA methyl-transferase [Encephalitozoon romaleae SJ-2008]
Length = 551
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 143/394 (36%), Positives = 221/394 (56%), Gaps = 44/394 (11%)
Query: 1 MGKVK--GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQ 58
MGK K G+ RLDKYY LAKE GYR+R+++KL+Q++ K++FL+++H ++DLCAAPG W Q
Sbjct: 1 MGKSKSIGRTRLDKYYNLAKEKGYRARSAFKLLQMNRKYAFLKNAHVLIDLCAAPGSWSQ 60
Query: 59 VAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
VA Q +P+ ++ +DL PI I ++ +DIT ECR ++++++ G + D+VLHD
Sbjct: 61 VAAQEMPLRRKIVAVDLEPIKFIGDVDTIVEDITSDECRLKLREIL---GAQKADVVLHD 117
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+PNVG +W +A +QN L + S KLA++FL G F+TKVFRSQDY S+ L QLFE
Sbjct: 118 GAPNVGTSWENDAFNQNLLALHSTKLASEFLKRGGVFITKVFRSQDYFSLHNILSQLFET 177
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKR 238
VE KP +SRS SAEI+L+ + + +D LL+ +F + +
Sbjct: 178 VETSKPLSSRSQSAEIFLVCLGFIGEENVDYSLLEPSAVFT----------------ETK 221
Query: 239 HRDGYEDGDTTLRKVSLATDFIWSNNP---LEILGSVTSITFGDPACSAIKDHELTTE-E 294
GY+D + +K+ T+F+ ++P E+L + I KD E E
Sbjct: 222 DAGGYDDFNFC-KKLKF-TEFLKEDDPDVLSEMLSKYSEIMVDIDE----KDIPKVLEPE 275
Query: 295 VKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPAS-ASAPTEGENEEDADNRVL 353
+ DL++LGK D + +L+ R +I +K + + EN E+A
Sbjct: 276 FLDMFRDLQLLGKGDIRKVLRKRRRI---IQDVQKGVIEVPDLDFLRDNENVEEA----- 327
Query: 354 NEMEELKYAMDQRKKREKKLLAKKRAKDKARKAT 387
ELK + K +E ++L +KR + RK +
Sbjct: 328 ----ELKEKSSEEKIKEIQMLIEKRKRKNERKES 357
>gi|71896315|ref|NP_001026096.1| pre-rRNA processing protein FTSJ3 [Gallus gallus]
gi|53130786|emb|CAG31722.1| hypothetical protein RCJMB04_10b6 [Gallus gallus]
Length = 767
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 111/263 (42%), Positives = 170/263 (64%), Gaps = 9/263 (3%)
Query: 64 VPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNV 123
+PV SLV+G+DLVPI PI V+L++DIT +CR ++K ++ V D+VL+DG+PNV
Sbjct: 1 MPVSSLVIGVDLVPIKPIPNVVTLQEDITTEKCRQALRKELQTWKV---DVVLNDGAPNV 57
Query: 124 GGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDK 183
G +W +A SQ L + ++KLA +FL G F+TKVFRS+DY +L+ +Q F KV+ K
Sbjct: 58 GASWVHDAYSQANLTLMALKLACEFLCKGGWFITKVFRSRDYQPLLWIFQQFFHKVQATK 117
Query: 184 PAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHRDG 242
P ASR+ SAEI+++ Y+AP KID + D KY F + V + V +++ +K+K +G
Sbjct: 118 PQASRNESAEIFVVCQGYQAPDKIDSKFFDPKYAFKEVEVHAKSVSELV--SKKKPKAEG 175
Query: 243 YEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDL 302
Y DGDTTL DF+ + NP++ L IT GD +++H TTEE++ C D+
Sbjct: 176 YADGDTTLYHRFTLMDFLKAPNPVDFLSKANEITLGD---GELENHSSTTEELRQCCKDI 232
Query: 303 RVLGKQDFKHLLKWRMQIKKAFS 325
RVLG+++ + LL WR ++++ +
Sbjct: 233 RVLGRKELRALLNWRTKLRRFLT 255
>gi|401885967|gb|EJT50044.1| RNA methyltransferase [Trichosporon asahii var. asahii CBS 2479]
Length = 850
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 157/451 (34%), Positives = 234/451 (51%), Gaps = 64/451 (14%)
Query: 64 VPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNV 123
+P GSL++G+DL+PI P+ ++ + DIT P+CR +++ M H +A DLVLHDG+PNV
Sbjct: 1 MPKGSLIIGVDLMPIKPLPHVIAFQADITTPKCRNELRQHM--HDWKA-DLVLHDGAPNV 57
Query: 124 GGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDK 183
G AW Q+A SQN LV+ S++LAT+FL G FVTKVFRSQDY+S+++ QLF VE K
Sbjct: 58 GAAWVQDAFSQNELVLQSLRLATEFLVKGGNFVTKVFRSQDYNSLMWVFNQLFRHVEATK 117
Query: 184 PAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQG--SVEPRKVV------------- 228
P +SR+ SAEI+++ + AP IDP+ LD K++F+ S P +
Sbjct: 118 PPSSRNVSAEIFVVCRDFIAPKHIDPKFLDPKHVFKDLQSSLPASITEAPAEEASTAATM 177
Query: 229 ----------------------DVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPL 266
+V K++R R+GY DGD TL + A+DF+ +P+
Sbjct: 178 ASTAKAANAAARLAATNNHAHANVYAPEKKRRQREGYADGDYTLFHKASASDFV-RGDPV 236
Query: 267 EILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSS 326
ILG++ I F TEE K L+VLGK DFK L+KWR+ I+
Sbjct: 237 AILGTMNKIAF-------------ETEEEKEW---LKVLGKGDFKALMKWRLAIRLEIGL 280
Query: 327 AEKATVPASASAPTEGENEEDADNRVLNEMEELKYAMDQRKKREKKLLAKKRAKDKARKA 386
KA+ A+ E D + ++ E++ L ++KREKK + + K +
Sbjct: 281 DVKASKTEEATE-DVEVEEMDEEQQISEELKRLHEEKRAKQKREKKRKNEIKTKTIQKLQ 339
Query: 387 TGMQ----IDVMQDDYTDHELFSLSSIKGKKDLAAVEYDDDDVNAAAEDSEDERPNRDTQ 442
GM +D+ + E+F L +G+++ +D V A SE E + +
Sbjct: 340 LGMTAPTDLDMDDRELAGEEMFDLG--EGERENRTGRSIEDAVRDADGMSESEESEVEQE 397
Query: 443 EHVSSDIDSDEERRKYDEQLEEVLDQAYENY 473
E + SDEER + LE LD Y++Y
Sbjct: 398 EDDDEVLSSDEERERRTAALEGTLDDLYDSY 428
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 109/182 (59%), Gaps = 10/182 (5%)
Query: 636 AEILACAKKML-RKKQREQILDDAYNRY-MFDDDGLPDWFLEEERRHRQAIRPVTKEEIA 693
AE A +++ R+ Q++D+ +N+ + DGLP WFL++E +H + P+TKE +
Sbjct: 668 AEAQTLANRLVNREVTASQLIDEGFNKLSTHNKDGLPSWFLDDESKHYRPNIPITKEAVQ 727
Query: 694 AMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQL 753
A++ + + +DARP KK+AEAK RKK A +LE+ +KKA + + D++D K +Q+ +L
Sbjct: 728 ALRDRQRALDARPIKKIAEAKGRKKMKAAARLERAKKKAAGVMETEDLNDGEKARQVSRL 787
Query: 754 YKSAVP--KRPKKEYVVAK---KGVQVR--AGKGKV-LVDPRMKKDSRTHGSGKARKGGS 805
+ A KR +++ VVAK KGV+ R KGK +VD RM+K+ R R G
Sbjct: 788 LRRAAAGEKRQERKVVVAKGVNKGVKGRPKGVKGKYKIVDARMRKEVRAQKRIAKRDKGK 847
Query: 806 KK 807
K+
Sbjct: 848 KR 849
>gi|401827093|ref|XP_003887639.1| rRNA methylase [Encephalitozoon hellem ATCC 50504]
gi|392998645|gb|AFM98658.1| rRNA methylase [Encephalitozoon hellem ATCC 50504]
Length = 551
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 199/339 (58%), Gaps = 36/339 (10%)
Query: 1 MGKVK--GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQ 58
MGK K GK RLDKYY LAKE GYR+R+++KL+Q++ K+ FL ++H ++DLCAAPG W Q
Sbjct: 1 MGKSKSIGKTRLDKYYNLAKEKGYRARSAFKLLQMNRKYGFLGNAHVLIDLCAAPGSWSQ 60
Query: 59 VAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
VA Q +P+ ++ +DL PI I ++ +DIT ECR ++++++ H D+VLHD
Sbjct: 61 VAAQEMPLRRKIVAVDLEPIKFIGDVDTIVEDITSNECRLKLREILGAHKA---DVVLHD 117
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+PNVG +W +A +QN LV+ S KLA++FL G FVTKVFRSQDY S+ L QLFE
Sbjct: 118 GAPNVGTSWENDAFNQNLLVLHSTKLASEFLKKGGVFVTKVFRSQDYFSLHSILAQLFET 177
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKR 238
VE KP +SRS SAEI+L+ + + +D +L EP V ++
Sbjct: 178 VETSKPLSSRSQSAEIFLVCLGFVGEENVDYSVL----------EPSAVFTEMKDA---- 223
Query: 239 HRDGYEDGDTTLRKVSLATDFIWSNNPL---EILGSVTSIT--FGDPACSAIKDHELTTE 293
GY+D + +K++ ++F+ ++P E+L + I + S + + E
Sbjct: 224 --GGYDDFNFH-KKLNF-SEFLKEDDPAVLSEMLSKYSEIVVDIDEKDVSKVLEPEFLD- 278
Query: 294 EVKALCDDLRVLGKQDFKHLLKWRMQIKKAFSSAEKATV 332
+ DL++LGK D + +L+ R KK S + T+
Sbjct: 279 ----MFKDLQLLGKGDIRKVLRKR---KKIIQSVRERTI 310
>gi|226466768|emb|CAX69519.1| hypothetical protein [Schistosoma japonicum]
Length = 260
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/244 (46%), Positives = 161/244 (65%), Gaps = 9/244 (3%)
Query: 1 MGK-VK-GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQ 58
MGK +K GK R DK+Y LAKE G+RSRA++KL+QL+ +F FL SS ++DLCAAPGGW+Q
Sbjct: 1 MGKKIKTGKARKDKFYYLAKETGFRSRAAFKLIQLNRRFKFLNSSKVLIDLCAAPGGWLQ 60
Query: 59 VAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
VA + +P+ S ++G+DLVPI PI + DIT +C+ ++ + E D+VLHD
Sbjct: 61 VAAKEMPIASQIIGVDLVPIHPIPKVKTFIADITTDKCKQILRNELNESKA---DVVLHD 117
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+PNVG AW+ + SQ L ++S +AT+FL G FVTKVFRS+DY + L Q F
Sbjct: 118 GAPNVGAAWSIDEYSQAVLSLNSFAIATEFLRRGGWFVTKVFRSRDYEPFKWVLSQFFRT 177
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRK----VVDVLRGT 234
V KP ASR SAEI+++G Y AP +IDP+ LD +++F EP+ + L+ +
Sbjct: 178 VRAIKPEASRLESAEIFIVGQFYLAPERIDPKFLDARHVFGEIDEPKNRATLISAFLKES 237
Query: 235 KQKR 238
++KR
Sbjct: 238 RKKR 241
>gi|387592418|gb|EIJ87442.1| FtsJ cell division protein [Nematocida parisii ERTm3]
gi|387596902|gb|EIJ94522.1| FtsJ cell division protein [Nematocida parisii ERTm1]
Length = 570
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 134/403 (33%), Positives = 210/403 (52%), Gaps = 51/403 (12%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDKYY LAKEHGYR+R+++KL+QL+ F+ L + H+ +DLCAAPGGW+QV + V
Sbjct: 13 GKDRLDKYYFLAKEHGYRARSAFKLIQLNQSFNLLSNIHSAVDLCAAPGGWLQVLSKTVL 72
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
S ++G+DL PI PI G ++ DIT C+A + + E V DLVLHDG+PNVG
Sbjct: 73 PPSKIVGVDLDPIKPIHGVHTIVGDITDKICKAEILAAVGETEV---DLVLHDGAPNVGA 129
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
+W +++ QN LV + KLA + L GTFVTKVFRS+D++S+++ QLF + KP
Sbjct: 130 SWERDSYVQNELVCHAAKLACKILKKNGTFVTKVFRSKDFNSLVWMCNQLFTECLTTKPR 189
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRHRDGYED 245
+SR SAE +L+ YK P +D + D ++F E + L ++R +
Sbjct: 190 SSRDESAEAFLVCRGYKKPDTLDEKFFDPLFIFAEKDEEEAKENTLSNILRER----IDL 245
Query: 246 GDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLRVL 305
T K+ D I EE L DL V+
Sbjct: 246 SKCTKVKIDCMKDMI-------------------------------DEETAILLSDLLVV 274
Query: 306 GKQDFKHLLKWRMQIKKAFSSAEKATVP---ASASAPTEGENEEDADNRVLNEMEELKYA 362
+ D + L++ ++++A+ + P P E R +E+ E++ A
Sbjct: 275 DEADKRRLVRTLKKVQRAYIGYQGKNTPEEIVDTRTPIE---------RQQDELNEIQRA 325
Query: 363 MDQRKK-REKKLLAKKRAKDKARKATGMQIDVMQDDYTDHELF 404
M++R+K +++K+LAK+ + +I+ + D+ + +F
Sbjct: 326 MERREKIQQRKILAKRTKSLGLTENDVEEIEKIHGDFFEDNIF 368
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 19/171 (11%)
Query: 640 ACAKKMLRKKQREQILDDAYNRYMFDDD-GLPDWFL-EEERRHRQAIRPVTKEEIAAMKA 697
C ++ K+ E+ +D +RY++DDD LP +F +EE+ +R+ + ++++
Sbjct: 414 VCGYRL--KEDEEEFENDGIDRYVYDDDENLPHFFRNDEEKYNRRYVFNEKRDDL----- 466
Query: 698 QFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSA 757
E +KK+ E KAR+ R RKL K++++ + D+ R+ RK K
Sbjct: 467 ---EKKVTISKKLEEIKARRMRRVERKLRKIKERLEQGEEAVDL--RAIRKGA---MKKE 518
Query: 758 VPKRPKKEYVVAKKGVQVRAGKGKV-LVDPRMKKDSRTHGSGKARKGGSKK 807
V +RPK + + V + KGK + D RMKKD + RK KK
Sbjct: 519 VRERPKMVFAGPSRTV-AKGIKGKFKMTDRRMKKDKAGLKRAEERKAKGKK 568
>gi|291228520|ref|XP_002734226.1| PREDICTED: Putative rRNA methyltransferase 3-like [Saccoglossus
kowalevskii]
Length = 261
Score = 219 bits (557), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 102/202 (50%), Positives = 147/202 (72%), Gaps = 3/202 (1%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK R DK+Y+LAKE GYR+R+++KL+QL+ KF FL+ S ++DLCAAPGGW+QVA +P
Sbjct: 8 GKGRKDKFYKLAKETGYRARSAFKLLQLNRKFQFLQKSRVLIDLCAAPGGWLQVASNHMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V SL++G+DLVPI PI ++++ DIT +CR+ ++ +++ D+VL+DG+PNVG
Sbjct: 68 VSSLIVGVDLVPIRPIPNTITVQADITTEKCRSLLRNELKDWKA---DIVLNDGAPNVGK 124
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
W +A +Q +L + ++KLA+ FL G FVTKVFRS+DY +++ KQLF+KV KP
Sbjct: 125 NWLHDAFTQASLTLKALKLASDFLTQGGWFVTKVFRSKDYQPLMWVFKQLFKKVHATKPP 184
Query: 186 ASRSASAEIYLLGIKYKAPAKI 207
ASRS SAEI+++ Y AP KI
Sbjct: 185 ASRSESAEIFVVCQGYIAPDKI 206
>gi|429964490|gb|ELA46488.1| 23S rRNA (uridine(2552)-2'-O-)-methyltransferase [Vavraia culicis
'floridensis']
Length = 314
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 129/326 (39%), Positives = 183/326 (56%), Gaps = 46/326 (14%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQR-V 64
GK RLDKYY LAKE GYR+R+++KL+QL+ KF+FL + +V+DLC APGGW+QVAVQ +
Sbjct: 8 GKKRLDKYYHLAKEQGYRARSAYKLIQLNKKFNFLSTCTSVVDLCCAPGGWLQVAVQHNI 67
Query: 65 PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVG 124
P V+G+DL PI I ++ DIT P VK+++ G D VLHDG+PNVG
Sbjct: 68 PD---VVGVDLYPIKKINNVKAIVGDITSP---GTVKEILSMVG--EADCVLHDGAPNVG 119
Query: 125 GAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKP 184
W ++A QN LV+ ++K++T+ L G F+TKVFRS+DY S+L+ L QLFE V KP
Sbjct: 120 VCWEKDAFEQNELVLHAIKISTKILKKDGVFLTKVFRSKDYFSILWVLNQLFESVVSTKP 179
Query: 185 AASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRHRDGYE 244
+SR SAEI++ YK P+KID + D ++F K+K + Y
Sbjct: 180 ISSREVSAEIFVFCRGYKKPSKIDDKFFDANHVF----------------KEKEISENY- 222
Query: 245 DGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLRV 304
KV ++F S P +L + T + + D + + K + DDLR
Sbjct: 223 ------YKVIKFSEFFMSEEPKTVLETYTKMLIDVKG--ELFD-RIFDQNFKLMLDDLRQ 273
Query: 305 LGKQDFKHLL-----------KWRMQ 319
+ K D K +L KWR++
Sbjct: 274 ISKHDVKKILQKKRKAHQIHRKWRVR 299
>gi|429961997|gb|ELA41541.1| 23S rRNA (uridine(2552)-2'-O-)-methyltransferase [Vittaforma
corneae ATCC 50505]
Length = 503
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 124/354 (35%), Positives = 199/354 (56%), Gaps = 37/354 (10%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
K RLDKYY LAKE GYR+R+++KL++L+ K++FL +++ +DLCAAPGGWMQ+ Q +P
Sbjct: 5 KQRLDKYYNLAKEKGYRARSAFKLLELNRKYNFLSNTNIAVDLCAAPGGWMQILAQEMPS 64
Query: 67 GSLVLGLDLVPIAPI-RGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
++G+DL PI P+ +S DIT +CR + + +E H V D+ +HDG+P+ G
Sbjct: 65 PRKIIGIDLDPIKPLGSDTISFVGDITTADCRRTLIRYLEGHQV---DIFVHDGAPSFGS 121
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
+ ++ QN LV+ ++KLAT+FL G FVTK+FRS+++ + L++LF +V++ KP
Sbjct: 122 SKDRDIFIQNDLVLHALKLATEFLKEGGAFVTKIFRSENFFKITKVLEELFVQVDITKPM 181
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRHRDGYED 245
+SRS SAEI+ + +++ P IDP + + + LF + VD K+K R
Sbjct: 182 SSRSESAEIFAVCRRFRNPEAIDPSIFNSEVLFYD-----ETVD-----KEKNKR----- 226
Query: 246 GDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLRVL 305
L +DFI + +IL T++ D +L TEE + + D+++L
Sbjct: 227 --------MLLSDFIKDKSN-KILKECTNVIVD-------FDCDLITEEYREMFKDIKLL 270
Query: 306 GKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEEL 359
D K + K + +I K S +P + E D RVL + E++
Sbjct: 271 HDTDLKKISKLKAKIVKGVGSG-TYDIPILSELVIADEKNNTQD-RVLTDAEKI 322
>gi|70944493|ref|XP_742172.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56521000|emb|CAH79645.1| hypothetical protein PC000405.03.0 [Plasmodium chabaudi chabaudi]
Length = 284
Score = 209 bits (531), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 94/221 (42%), Positives = 156/221 (70%), Gaps = 7/221 (3%)
Query: 1 MGKVK--GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQ 58
MGK K GK R+DKYY+LAK GYR+R+++KL+Q+ K++ ++++ ++DLCAAPGGW+Q
Sbjct: 1 MGKKKKVGKERIDKYYKLAKSAGYRARSAFKLIQIAKKYNIFKNANILIDLCAAPGGWLQ 60
Query: 59 VAVQRVPVGSLVLGLDLVPIAPI-RGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117
VA + + S ++G+DL+PI I ++++ DIT EC ++K +++ D++L+
Sbjct: 61 VAYKNMSKSSTIIGVDLMPIRKIDNNVITIKSDITSVECIRKIKDIIKYEKA---DVILN 117
Query: 118 DGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFE 177
DG+PNVG ++ ++ +QN LV+ S+KLA +FL G F+TKVFR+++Y S+++ L++LF
Sbjct: 118 DGAPNVGTTYSYDSFNQNILVLSSIKLAYKFLTRGGIFITKVFRNEEYVSLIWVLEKLFT 177
Query: 178 KVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF 218
+V+ KP +SR S+EIYL+G+ + KID + D Y+F
Sbjct: 178 EVKHIKPRSSREISSEIYLIGLNFLGN-KIDKKYFDYTYIF 217
>gi|323509097|dbj|BAJ77441.1| cgd4_1580 [Cryptosporidium parvum]
Length = 491
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 130/337 (38%), Positives = 175/337 (51%), Gaps = 58/337 (17%)
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
V S ++G+DLV I I G + + DIT CR K + +E D+VLHDG+PNVG
Sbjct: 3 VSSKIIGVDLVAIKGIPGVTTFKCDITTERCR---KLIFDELNGIPVDVVLHDGAPNVGT 59
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
+W ++A QN LV+ S +LA + L P G FVTKVFRS DY+SVL+ L QLF V+ KP
Sbjct: 60 SWDKDAYIQNELVLHSAELACEILRPNGIFVTKVFRSTDYNSVLWVLSQLFNTVKATKPQ 119
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVL-------------- 231
+SR+ SAEI+L+ + YKAP KID R D KY+FQ + E + V++L
Sbjct: 120 SSRNVSAEIFLVCLGYKAPKKIDSRFFDPKYVFQSNKEENEGVNLLPLGDDQPMDDESGS 179
Query: 232 ------------RGTKQ--------------KRHRDGYEDGDTTLRKVSLATDFIWSNN- 264
R TK+ KR+RDGYE GD R +S A DF + N
Sbjct: 180 ENTEDNDNKLINRKTKKSMKSSLSELIKGIGKRNRDGYEKGD-DFRMIS-AYDFFHAENP 237
Query: 265 PLEILGSVT----------SITFGDPACSAIKDHELTTEEVKALCDDLRVLGKQDFKHLL 314
PL +L S T S T + +H T E+K LC+DL+VLGK++ LL
Sbjct: 238 PLLLLKSNTINLNPKKVDESNTLERDFIDLVLNHPKTNHEIKLLCEDLKVLGKKELMQLL 297
Query: 315 KWRMQIKKAF--SSAEKATVPASASAPTEGENEEDAD 349
KWR + K +S K S +N +D+D
Sbjct: 298 KWRFLVLKDIKANSIGKKDSLTSKEKNVTNDNNDDSD 334
>gi|402587925|gb|EJW81859.1| hypothetical protein WUBG_07234 [Wuchereria bancrofti]
Length = 186
Score = 203 bits (517), Expect = 3e-49, Method: Composition-based stats.
Identities = 101/181 (55%), Positives = 130/181 (71%), Gaps = 5/181 (2%)
Query: 1 MGKVK--GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQ 58
MGK GK R DKYY LAKE GYRSRA++KL+QL+ +F FL+ S AV+DLCAAPGGW+Q
Sbjct: 1 MGKKTKIGKQRRDKYYHLAKETGYRSRAAFKLLQLNKRFEFLQKSRAVVDLCAAPGGWLQ 60
Query: 59 VAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
VA+Q +PV SL +G+DLVPI PI V+L+ DIT + R V+K E HG A D VLHD
Sbjct: 61 VAIQNMPVSSLCIGVDLVPIKPINKCVTLQGDITTEKTRQMVRK--ELHGWEA-DCVLHD 117
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+PNVG W Q+A QN L + +++LATQ L G FVTK+FRS DY ++ ++LF++
Sbjct: 118 GAPNVGRNWVQDAFQQNCLTLSALRLATQILTKNGIFVTKIFRSSDYCHLISVFEKLFKQ 177
Query: 179 V 179
V
Sbjct: 178 V 178
>gi|195567038|ref|XP_002107082.1| GD17262 [Drosophila simulans]
gi|194204479|gb|EDX18055.1| GD17262 [Drosophila simulans]
Length = 204
Score = 198 bits (503), Expect = 1e-47, Method: Composition-based stats.
Identities = 101/185 (54%), Positives = 133/185 (71%), Gaps = 5/185 (2%)
Query: 1 MGKVK--GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQ 58
MGK GK R DK+Y+LAKE G RSRA++KL+QL+ KF FL+ S LDLCAAPGGWMQ
Sbjct: 1 MGKKTKVGKTRKDKFYQLAKETGLRSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPGGWMQ 60
Query: 59 VAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
VA Q +PV S+V+G+DL PI PI G + L +DIT +CR + K ++ D+VLHD
Sbjct: 61 VAKQNMPVSSIVIGVDLFPIRPIAGCIGLVEDITTEKCRQSLTKELQSWKA---DVVLHD 117
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+PNVG W +A Q L ++++KL+TQFL G FVTKVFRS+DY+++L+ LKQLF+K
Sbjct: 118 GAPNVGRNWLYDAYQQICLTLNALKLSTQFLRNGGWFVTKVFRSKDYNALLWVLKQLFKK 177
Query: 179 VEVDK 183
+V K
Sbjct: 178 FQVQK 182
>gi|219117612|ref|XP_002179598.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408651|gb|EEC48584.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 209
Score = 192 bits (489), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 96/212 (45%), Positives = 147/212 (69%), Gaps = 7/212 (3%)
Query: 13 YYRLAKEHGYRSRASWKLVQLDSKFSFL-RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVL 71
Y ++AKE G RSRA++KL Q++ K+ L ++ +AVLDLCAAPGGW QVA + ++
Sbjct: 1 YSQVAKEQGLRSRAAFKLTQINRKYPVLEKAQNAVLDLCAAPGGWTQVAARTCNKSVPII 60
Query: 72 GLDLVPI---APIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWA 128
+D++PI A + +L DIT +C++ +K ++ R D+VLHDG+PN+G +
Sbjct: 61 AVDILPIRSFANAQNITTLIGDITTDKCKSDIKHALQG---RPVDVVLHDGAPNIGADYG 117
Query: 129 QEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASR 188
++A QN + + +++ ATQ L GTF+TKV+RS+DY+S + L+QLF+ V+ KP ASR
Sbjct: 118 KDAYEQNEIALHALRCATQHLVKGGTFITKVYRSRDYASFQWLLQQLFQGVQAFKPKASR 177
Query: 189 SASAEIYLLGIKYKAPAKIDPRLLDVKYLFQG 220
+ SAEI+L+ KYKAP+K+DPRLLD K++F+
Sbjct: 178 AQSAEIFLVCEKYKAPSKLDPRLLDPKHVFEA 209
>gi|223997678|ref|XP_002288512.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975620|gb|EED93948.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 208
Score = 192 bits (487), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 94/211 (44%), Positives = 144/211 (68%), Gaps = 7/211 (3%)
Query: 13 YYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGS--LV 70
++ +AKE G+RSRA++KL Q++ KF+ L+++ ++DLCAAPGGW QV + +P S +
Sbjct: 1 HHSVAKEQGFRSRAAFKLTQINRKFNILKNAQTIIDLCAAPGGWTQVCARSLPNNSSTTI 60
Query: 71 LGLDLVPIAPI--RGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWA 128
L +D++PI + + ++L DIT +C+A ++ M+ G D+VL DG+PNVG ++
Sbjct: 61 LAVDILPIRNLNSKNVITLIGDITTEKCKAAIRSEMQGAGA---DVVLCDGAPNVGASYD 117
Query: 129 QEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASR 188
++A QN L + ++K A + L KGTFVTK++RS DYS+ L+ KQ F V+ KP+ASR
Sbjct: 118 RDAYMQNELALHALKCACEHLRKKGTFVTKLYRSSDYSAYLWVAKQFFHTVQAVKPSASR 177
Query: 189 SASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ 219
S SAEI+L+ Y AP KIDPR+ D K +F+
Sbjct: 178 SQSAEIFLVCEGYIAPDKIDPRMFDPKCVFE 208
>gi|399949976|gb|AFP65632.1| SAM-dependent methyltransferase [Chroomonas mesostigmatica
CCMP1168]
Length = 309
Score = 189 bits (479), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 94/212 (44%), Positives = 138/212 (65%), Gaps = 1/212 (0%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
K+R D +Y L+K++ +RSRA++KL++L+ KF FL + +VLDLCAAPGGW+QVA + P
Sbjct: 5 KNRKDFFYFLSKKYKFRSRAAFKLIELNKKFKFLNHAESVLDLCAAPGGWLQVARKFSPP 64
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
+ ++G+D I PI G +L+ DIT C + + E + D+VLHDG+P +G +
Sbjct: 65 FAHIIGVDACNILPIEGCYTLKGDITSFGCLFAIFNI-EIFKKKKIDVVLHDGAPRMGTS 123
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
W ++A +QN L +++ KLAT L KG FVTK+F S + L+ L+ F+K+ V KP A
Sbjct: 124 WTRDAFNQNDLALNAFKLATCCLKKKGWFVTKIFCSGNIHGFLFALRFFFKKIFVCKPIA 183
Query: 187 SRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF 218
SR S+E YL+ + P KID +LD KYLF
Sbjct: 184 SRKTSSETYLICKNFIVPFKIDKAILDKKYLF 215
>gi|327275748|ref|XP_003222634.1| PREDICTED: putative rRNA methyltransferase 3-like [Anolis
carolinensis]
Length = 771
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 134/211 (63%), Gaps = 6/211 (2%)
Query: 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCL 172
D+VL+DG+PNVG W +A SQ L + ++KLA FL+ G F+TKVFRS+DY +L+
Sbjct: 22 DVVLNDGAPNVGARWFPDAFSQANLTLSALKLACDFLSKGGWFITKVFRSRDYQPLLWIF 81
Query: 173 KQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVL 231
+QLF KV+ KP ASR+ SAEI+++ Y AP KID + D K+ F + V+ + V +++
Sbjct: 82 QQLFRKVQATKPQASRNESAEIFVVCQGYLAPDKIDSKFFDPKFAFKEVEVQAKSVTELV 141
Query: 232 RGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELT 291
+++K +GYEDG T L K TDF+ + NP++ L + I ++ H T
Sbjct: 142 --SQKKPKAEGYEDGATVLYKRCTLTDFLKAANPVDFLAKASEIVLD---SEELEHHSAT 196
Query: 292 TEEVKALCDDLRVLGKQDFKHLLKWRMQIKK 322
TEEV+ C D+RVLG+++ + LL WR ++++
Sbjct: 197 TEEVRHCCKDIRVLGRKELRALLNWRTKLRR 227
>gi|160331225|ref|XP_001712320.1| sbp1 [Hemiselmis andersenii]
gi|159765767|gb|ABW97995.1| sbp1 [Hemiselmis andersenii]
Length = 317
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 91/212 (42%), Positives = 137/212 (64%), Gaps = 1/212 (0%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
K R D YY L+K++ +RSRA++KL++L+ KF FL S VLDLCAAPGGW+QV + V
Sbjct: 5 KERKDLYYFLSKKYFFRSRAAFKLIELNQKFRFLDKSRGVLDLCAAPGGWLQVVQKVVSP 64
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
GSL++G+D I PI+G + DIT C + K+ R D+VLHDG+P G +
Sbjct: 65 GSLIIGVDAKKILPIKGCNMFKGDITSRGCLEPILKLKNWKNKRL-DVVLHDGAPRTGTS 123
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
W ++A++QN+L +++ KLA + G FV+K+F S ++ +L+ L+ F+K+++ KP A
Sbjct: 124 WVRDALNQNSLSLNAFKLAVNCIEKGGWFVSKIFCSGNFHGLLFVLRFFFKKIKIFKPRA 183
Query: 187 SRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF 218
SR SAE YL+ + P K+D LL K++F
Sbjct: 184 SRLTSAETYLICKDFFLPTKLDQNLLKGKFIF 215
>gi|62914003|gb|AAH00131.2| FTSJ3 protein, partial [Homo sapiens]
Length = 734
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 133/209 (63%), Gaps = 6/209 (2%)
Query: 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQ 174
VL+DG+PNVG +W +A SQ L + +++LA FLA G+F+TKVFRS+DY +L+ +Q
Sbjct: 1 VLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLARGGSFITKVFRSRDYQPLLWIFQQ 60
Query: 175 LFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRG 233
LF +V+ KP ASR SAEI+++ + AP K+D + D K+ F + V+ + V +++
Sbjct: 61 LFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKFFDPKFAFKEVEVQAKTVTELV-- 118
Query: 234 TKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTE 293
TK+K +GY +GD TL + TDF+ + NP++ L + I D + H TTE
Sbjct: 119 TKKKPKAEGYAEGDLTLYHRTSVTDFLRAANPVDFLSKASEIMVDD---EELAQHPATTE 175
Query: 294 EVKALCDDLRVLGKQDFKHLLKWRMQIKK 322
+++ C D+RVLG+++ + LL WR ++++
Sbjct: 176 DIRVCCQDIRVLGRKELRSLLNWRTKLRR 204
>gi|330038977|ref|XP_003239752.1| SAM-dependent methyltransferase [Cryptomonas paramecium]
gi|327206677|gb|AEA38854.1| SAM-dependent methyltransferase [Cryptomonas paramecium]
Length = 297
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 122/195 (62%), Gaps = 1/195 (0%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
K R D +Y ++K+ +RSRA++KL+++D+KF F + + VLDLC+APG WMQV+ + +
Sbjct: 6 KKRCDFFYFISKKFKFRSRAAFKLIEIDNKFHFFKKAVGVLDLCSAPGSWMQVSRKLTQL 65
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
++G+DL I I G V + DIT C V K+++ G+ F+++LHDGSP
Sbjct: 66 HIPIVGIDLCKIKKIHGCVFVNGDITSYYCFNSVLKIIKNFGL-TFNIILHDGSPRAEIK 124
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
W + QN LV+ + K + L P G FVTK+F+S+ ++ +L+ LK F K+ + KP A
Sbjct: 125 WLSDVYKQNKLVLYAFKFTHKMLCPNGWFVTKIFKSKYFNGLLFFLKSYFGKIFILKPIA 184
Query: 187 SRSASAEIYLLGIKY 201
SR S EIY++ K+
Sbjct: 185 SRKESVEIYIICKKF 199
>gi|162605884|ref|XP_001713457.1| SAM-dependent methyltransferase [Guillardia theta]
gi|13794389|gb|AAK39766.1|AF083031_123 SAM-dependent methyltransferase [Guillardia theta]
Length = 288
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 124/192 (64%), Gaps = 1/192 (0%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D +Y AK+ RSRA++KL+ L+ KF+F + S ++LDLC+APGGW+Q+ +
Sbjct: 5 DYWYHQAKKFNLRSRAAFKLLHLNDKFNFFKKSRSILDLCSAPGGWLQMCRILSNENCKI 64
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
G+D I+PI+ + DIT P ++K++ + R F ++L+DGSP +G W ++
Sbjct: 65 FGVDAQKISPIKKCETFIGDITSPNLIGLLEKIVIKTN-RKFCIILNDGSPKMGTFWNRD 123
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
A +QN LV+ +++ FL G F+TK+FRS++++ +L+ +K +FEKV + KP +SR
Sbjct: 124 AYNQNILVLYCLRIIRLFLKNNGWFITKIFRSENFNKILFVVKNMFEKVFIKKPKSSRPN 183
Query: 191 SAEIYLLGIKYK 202
SAEIYL+ K+K
Sbjct: 184 SAEIYLICKKFK 195
>gi|449664240|ref|XP_002156038.2| PREDICTED: pre-rRNA processing protein FTSJ3-like [Hydra
magnipapillata]
Length = 225
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 128/211 (60%), Gaps = 19/211 (9%)
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
G+DLVPI PI+ +++ DIT +CR V+K ++ D+VL+DG+PNVG AW Q+
Sbjct: 8 FGIDLVPIKPIKNVTTIQADITTDKCRQLVRKELKTWSA---DVVLNDGAPNVGAAWVQD 64
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
A SQ L + ++KLA++ L G F+TKVFRS+DY+++L+ +QLF+KV KP ASR+
Sbjct: 65 AFSQAQLALSALKLASEHLKRGGWFITKVFRSKDYTALLWVFQQLFKKVHATKPQASRNE 124
Query: 191 SAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLR----------GTKQKRHR 240
SAEI+++ Y P K+D R LD KY+F +++ + R K R R
Sbjct: 125 SAEIFVVCQGYLKPDKMDERFLDPKYVF------KEIHPIFRLSTPAKSCSLNKKVTRQR 178
Query: 241 DGYEDGDTTLRKVSLATDFIWSNNPLEILGS 271
+GY + + TL +FI S++ +EIL +
Sbjct: 179 EGYPENNITLHTTITDKEFITSSDAVEILST 209
>gi|296109210|ref|YP_003616159.1| ribosomal RNA methyltransferase RrmJ/FtsJ [methanocaldococcus
infernus ME]
gi|295434024|gb|ADG13195.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanocaldococcus
infernus ME]
Length = 245
Score = 155 bits (392), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 119/199 (59%), Gaps = 2/199 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
K + D YYRLAK+ YRSRA +KL+Q++ KF FL+ AVLDL APGGWM+ A + V
Sbjct: 11 KRKRDPYYRLAKKLKYRSRAYFKLLQINEKFHFLKPKQAVLDLGCAPGGWMEAAKEIVGD 70
Query: 67 GSLVLGLDLVPIAPIR--GAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVG 124
L++G+DL + P + + ++ D TK ++K+++ E G FD+V+ D SPN+
Sbjct: 71 QGLIVGIDLQKVKPFKDKNLIPIQGDFTKERNLKKIKEILRERGREKFDVVISDASPNIS 130
Query: 125 GAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKP 184
G WA + LV ++++AT+ L G FV KVF + K+ F+KV + KP
Sbjct: 131 GHWAVDHARSVELVKTALQIATEMLRKDGHFVAKVFYGDMVDELKNLAKKYFDKVYLTKP 190
Query: 185 AASRSASAEIYLLGIKYKA 203
ASR S+EIYL+ ++K
Sbjct: 191 RASRKESSEIYLIAKRFKG 209
>gi|348684386|gb|EGZ24201.1| hypothetical protein PHYSODRAFT_325341 [Phytophthora sojae]
Length = 301
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 132/221 (59%), Gaps = 8/221 (3%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AK+ GYR+R+++KL+QLD KF LR + V+DLCAAPGGW QV
Sbjct: 1 MGKTS-KDKRDIYYRKAKQQGYRARSAFKLLQLDDKFGLLRGATRVVDLCAAPGGWSQVI 59
Query: 61 VQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
+RVP S ++ +DL+ +AP+ G V L+ DIT +A +++ + + +V+ DG+
Sbjct: 60 AERVPKDSTIIAVDLMEMAPLDGVVQLQGDITH---KATADEIVAQFQGQKAQVVVSDGA 116
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
P+V G + Q LV+ + ++ Q L GTFV K+FR ++ S + L++ F KV
Sbjct: 117 PDVLGLHDLDEYLQAQLVLAGLNISLQILEDGGTFVAKLFRGKEVSLLYAQLRRFFSKVT 176
Query: 181 VDKPAASRSASAEIYLLGIKYKAPAKIDP----RLLDVKYL 217
KP SR++S E +++ + P P LLD++Y+
Sbjct: 177 CAKPKTSRNSSFESFVVCQDFHLPEGFVPDMERNLLDLRYV 217
>gi|344228963|gb|EGV60849.1| hypothetical protein CANTEDRAFT_109917 [Candida tenuis ATCC 10573]
Length = 299
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 127/217 (58%), Gaps = 11/217 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+QL+ +F + V+DLCAAPG W QV
Sbjct: 1 MGK-SSKDKRDLYYRRAKEEGWRARSAFKLLQLNEQFELFKGISKVVDLCAAPGSWSQVL 59
Query: 61 ------VQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114
VQ+ P G +V +DL P+ PI G +L+ DIT P+ R+ + E HG A D
Sbjct: 60 SRELYEVQKNPNGQIV-AVDLQPMTPINGVTTLQADITHPKTLQRI--LDEFHGELA-DF 115
Query: 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQ 174
V DG+P+V G + Q L++ +++L T L P GTFV K+FR +D + L
Sbjct: 116 VCSDGAPDVTGLHDLDEYIQAQLILSALQLTTCILKPGGTFVAKIFRGRDIDLLYSQLSY 175
Query: 175 LFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
LFEKV KP +SR +S E +++ + Y+ + P+L
Sbjct: 176 LFEKVICAKPRSSRGSSLEAFIVCLNYRPRPEWVPKL 212
>gi|50311753|ref|XP_455905.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49645041|emb|CAG98613.1| KLLA0F18414p [Kluyveromyces lactis]
Length = 301
Score = 152 bits (383), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 89/230 (38%), Positives = 134/230 (58%), Gaps = 13/230 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE GYR+R+++KL+QLD F FL+ + V+DLCAAPG W QV
Sbjct: 1 MGK-SSKDKRDLYYRKAKEQGYRARSAFKLLQLDDDFHFLQQAVRVVDLCAAPGSWSQVL 59
Query: 61 VQRV-PVGS-----LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114
+R+ P S ++ +DL P++PI ++L+ DIT P+ + ++ E G +A D
Sbjct: 60 SRRLFPQSSDNSDRKIVAVDLQPMSPIDNVITLQADITHPKTLQTITELFE--GKKA-DF 116
Query: 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQ 174
+ DG+P+V G + Q L++ +++L+T L G FV K+FR +D + L
Sbjct: 117 ICSDGAPDVTGLHDLDEYVQQQLILSALQLSTCLLRKGGNFVAKIFRGRDIDMLYSQLGY 176
Query: 175 LFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL---LDVKYLFQGS 221
LFEKV KP +SR S E +++ + Y PA +P+L V+ FQG
Sbjct: 177 LFEKVICAKPRSSRGTSLESFIVCLGYNPPANWEPKLDVNSSVEDFFQGC 226
>gi|301096605|ref|XP_002897399.1| ribosomal RNA methyltransferase, putative [Phytophthora infestans
T30-4]
gi|262107090|gb|EEY65142.1| ribosomal RNA methyltransferase, putative [Phytophthora infestans
T30-4]
Length = 302
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/221 (38%), Positives = 131/221 (59%), Gaps = 8/221 (3%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AK+ GYR+R+++KL+QLD KF L + V+DLCAAPGGW QV
Sbjct: 1 MGKTS-KDKRDIYYRKAKQQGYRARSAFKLLQLDDKFGLLSGATRVVDLCAAPGGWSQVI 59
Query: 61 VQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
+RVP S ++ +DL+ +AP+ G V L+ DIT +A +++ + + +V+ DG+
Sbjct: 60 AERVPKDSTIIAVDLMEMAPLDGVVQLKGDITH---KATADEIVAQFRGQKAQVVVSDGA 116
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
P+V G + Q LV+ + ++ Q L GTFV K+FR ++ S + L++ F KV
Sbjct: 117 PDVLGLHDLDEYLQAQLVLAGLNISLQILEDGGTFVAKLFRGKEVSLLYAQLRRFFSKVT 176
Query: 181 VDKPAASRSASAEIYLLGIKYKAPAKIDP----RLLDVKYL 217
KP SR++S E +++ + P P LLD++Y+
Sbjct: 177 CAKPKTSRNSSFEAFVVCQDFHLPKDFVPDMERNLLDLQYV 217
>gi|300708035|ref|XP_002996206.1| hypothetical protein NCER_100740 [Nosema ceranae BRL01]
gi|239605486|gb|EEQ82535.1| hypothetical protein NCER_100740 [Nosema ceranae BRL01]
Length = 171
Score = 150 bits (380), Expect = 2e-33, Method: Composition-based stats.
Identities = 72/155 (46%), Positives = 104/155 (67%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP 65
GK RLDKYY LAKE GYR+R+++KL+QL+ K+ FL+ + ++DLCAAPGGW+QVA Q +P
Sbjct: 8 GKQRLDKYYNLAKEKGYRARSAFKLLQLNKKYGFLKDAKILIDLCAAPGGWLQVAAQEMP 67
Query: 66 VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
++G+DL PI I + DIT ECR R+ ++ + R D++LHDG+PNVG
Sbjct: 68 RPRKIIGIDLDPIKYIGDVETFVCDITSDECRKRLYGMLSDTEFRQADVILHDGAPNVGT 127
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVF 160
+W +A +QN LV S++L++ F A + K F
Sbjct: 128 SWENDAFNQNLLVFYSLQLSSPFFARRRYICNKDF 162
>gi|365982615|ref|XP_003668141.1| hypothetical protein NDAI_0A07440 [Naumovozyma dairenensis CBS 421]
gi|343766907|emb|CCD22898.1| hypothetical protein NDAI_0A07440 [Naumovozyma dairenensis CBS 421]
Length = 309
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 131/226 (57%), Gaps = 15/226 (6%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHA--VLDLCAAPGGWMQ 58
MGK K + D YYR AKE GYR+R+++KL+QL+ +F FL ++ V+DLCAAPG W Q
Sbjct: 1 MGK-SSKDKRDLYYRKAKEQGYRARSAFKLLQLNDQFHFLDDTNLKRVVDLCAAPGSWSQ 59
Query: 59 VAVQRVPVGSL--------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVR 110
V +++ + ++ +DL P++PI V+L+ DIT P+ +K+++E G
Sbjct: 60 VLSKKLFNDTTLEQQNERKIVAVDLQPMSPIDHVVTLQADITHPK---TLKRILEIFGNE 116
Query: 111 AFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLY 170
D V DG+P+V G + Q L++ +++L T L GTFV K+FR +D +
Sbjct: 117 KADFVCSDGAPDVTGLHDLDEYVQQQLIMSALQLTTCILKEGGTFVAKIFRGRDIDMLYS 176
Query: 171 CLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKY 216
L LFE V KP +SR S E +++ + YK P+ PR LDV +
Sbjct: 177 QLGYLFENVVCAKPKSSRGTSLEAFIVCLGYKPPSNWKPR-LDVDF 221
>gi|255712339|ref|XP_002552452.1| KLTH0C05214p [Lachancea thermotolerans]
gi|238933831|emb|CAR22014.1| KLTH0C05214p [Lachancea thermotolerans CBS 6340]
Length = 303
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/239 (36%), Positives = 133/239 (55%), Gaps = 14/239 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE GYR+R+++KL+QLD +F FL + V+DLCAAPG W QV
Sbjct: 1 MGK-SSKDKRDLYYRKAKEEGYRARSAFKLLQLDEQFHFLDNVTRVVDLCAAPGSWSQVL 59
Query: 61 VQRV-------PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFD 113
+R+ ++ +DL P+ PI +++ DIT P+ ++ + E G +A D
Sbjct: 60 SRRLFDDDTENNSSKRIVAVDLQPMFPIDNVTTIQADITHPKTLNKIMDLFE--GEKA-D 116
Query: 114 LVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLK 173
V DG+P+V G + Q L++ +++L T L G FV K+FR +D + L
Sbjct: 117 FVCSDGAPDVTGLHDLDEYVQQQLILSALQLTTCLLREGGVFVAKIFRGRDIDMLYSQLS 176
Query: 174 QLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL---LDVKYLFQGSVEPRKVVD 229
LFE+V KP +SR S E +++ + Y+ P+ PRL + V+ FQG R +D
Sbjct: 177 FLFERVVCAKPRSSRGTSLESFIVCLGYRPPSDWKPRLDVNMSVEDFFQGCDIGRLTID 235
>gi|410077187|ref|XP_003956175.1| hypothetical protein KAFR_0C00450 [Kazachstania africana CBS 2517]
gi|372462759|emb|CCF57040.1| hypothetical protein KAFR_0C00450 [Kazachstania africana CBS 2517]
Length = 316
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/221 (37%), Positives = 125/221 (56%), Gaps = 14/221 (6%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFL---RSSHAVLDLCAAPGGWM 57
MGK K + D YYR AKE GYR+R+++KL+QL+ +F FL + V+DLCAAPG W
Sbjct: 1 MGK-SSKDKRDLYYRKAKEQGYRARSAFKLLQLNDEFHFLDDETNLKRVVDLCAAPGSWS 59
Query: 58 QVAVQRVPV-------GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVR 110
QV +++ G ++ +DL P++PI +L+ DIT PE + K++ G
Sbjct: 60 QVLSRKMFTESKGNLDGKKIVAVDLQPMSPIENVTTLQADITHPE---TLSKILHLFGNE 116
Query: 111 AFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLY 170
D V DG+P+V G + Q L++ +++L T L GTFV K+FR +D +
Sbjct: 117 KADFVCSDGAPDVTGLHDLDEYVQQQLIMSALQLTTCILKKNGTFVAKIFRGRDIDMLYS 176
Query: 171 CLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
L LFEKV KP +SR S E +++ + Y P+ +P+L
Sbjct: 177 QLGYLFEKVICAKPKSSRGTSLEAFIVCLGYNPPSNWEPKL 217
>gi|68472105|ref|XP_719848.1| potential tRNA anticodon loop methyltransferase [Candida albicans
SC5314]
gi|68472340|ref|XP_719731.1| potential tRNA anticodon loop methyltransferase [Candida albicans
SC5314]
gi|46441562|gb|EAL00858.1| potential tRNA anticodon loop methyltransferase [Candida albicans
SC5314]
gi|46441688|gb|EAL00983.1| potential tRNA anticodon loop methyltransferase [Candida albicans
SC5314]
gi|238881121|gb|EEQ44759.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Candida albicans WO-1]
Length = 293
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 122/211 (57%), Gaps = 4/211 (1%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+QL+ +F+ + V+DLCAAPG W QV
Sbjct: 1 MGKAS-KDKRDLYYRRAKEEGWRARSAFKLLQLNEEFNLFKDITRVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
Q++ S ++ +DL P+ PI G +++ DIT P+ R++ G D V DG+
Sbjct: 60 SQKLGPDSTIVAVDLQPMTPIDGVTTIQADITHPKTLQRIRDCF---GGEPADFVCSDGA 116
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
P+V G + Q+ L++ +++L T L P G+FV K+FR +D + L LF+KV
Sbjct: 117 PDVTGLHDLDEYIQSQLILSALQLTTCLLKPGGSFVAKIFRGRDIDLLYSQLSYLFDKVI 176
Query: 181 VDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
KP +SR S E +++ + YK P L
Sbjct: 177 CAKPRSSRGTSLEAFIVCLGYKPRPGWKPTL 207
>gi|241953819|ref|XP_002419631.1| 2'-O-ribose tRNA anticodon loop methyltransferase, putative; tRNA
(uridine-2'-O-)-methyltransferase, putative [Candida
dubliniensis CD36]
gi|223642971|emb|CAX43227.1| 2'-O-ribose tRNA anticodon loop methyltransferase, putative
[Candida dubliniensis CD36]
Length = 293
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 120/211 (56%), Gaps = 4/211 (1%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+QL+ +F V+DLCAAPG W QV
Sbjct: 1 MGKAN-KDKRDLYYRRAKEEGWRARSAFKLLQLNEEFDLFEGITRVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
Q++ S ++ +DL P+ PI G +++ DIT P+ R++ G D V DG+
Sbjct: 60 SQKLGPNSTIVAVDLQPMTPIDGVTTIQADITHPKTLQRIRDCF---GGEPADFVCSDGA 116
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
P+V G + Q+ L++ +++L T L P G+FV K+FR +D + L LF+KV
Sbjct: 117 PDVTGLHDLDEYIQSQLILSALQLTTCLLKPGGSFVAKIFRGRDIDLLYSQLSYLFDKVI 176
Query: 181 VDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
KP +SR S E +++ + YK P L
Sbjct: 177 CAKPRSSRGTSLEAFIVCLGYKPRPGWQPTL 207
>gi|255732766|ref|XP_002551306.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Candida tropicalis
MYA-3404]
gi|240131047|gb|EER30608.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Candida tropicalis
MYA-3404]
Length = 293
Score = 149 bits (375), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 122/211 (57%), Gaps = 4/211 (1%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+QL+ +F+ V+DLCAAPG W QV
Sbjct: 1 MGKAN-KDKRDLYYRRAKEEGWRARSAFKLLQLNEEFNLFEDLTRVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
Q++ S ++ +DL P+ PI G +++ DIT P ++++++ G D V DG+
Sbjct: 60 SQKLGPNSTIVAVDLQPMTPIDGVTTIQADITHPR---TLQRILDCFGGEPADFVCSDGA 116
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
P+V G + Q LV+ +++L T L P G FV K+FR +D + L LF+KV
Sbjct: 117 PDVTGLHDLDEYIQAQLVLSALQLTTCLLKPGGKFVAKIFRGRDIDLLYSQLSYLFDKVI 176
Query: 181 VDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
KP +SR S E +++ + YK P+L
Sbjct: 177 CAKPRSSRGTSLEAFIVCLGYKPREGWQPKL 207
>gi|402466053|gb|EJW01631.1| 23S rRNA (uridine(2552)-2'-O-)-methyltransferase [Edhazardia aedis
USNM 41457]
Length = 264
Score = 149 bits (375), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 132/233 (56%), Gaps = 10/233 (4%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG K + D YYR+AK+ GYR+R+++KL+Q+D ++ ++V+DLC+APG W QV
Sbjct: 1 MGS-NSKDKRDIYYRMAKKEGYRARSAYKLIQIDQEYDLFNGVNSVVDLCSAPGSWSQVC 59
Query: 61 VQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
Q++ V+ +D+ I P+ G L +DIT EC+ ++ +++++ DL+L DG+
Sbjct: 60 AQKINKNGKVISIDMQKIQPLDGVHFLREDITTEECKEKIFEIVKDK----IDLILFDGA 115
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
P+V G + Q L+ +++ + + TFV K FRS+D ++ K F+ V+
Sbjct: 116 PDVTGIIDIDEYHQTVLLKEALAITAKIAKVGATFVGKCFRSEDTGYIIKHFKNFFKTVK 175
Query: 181 VDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRG 233
+ KP SR++S E +LL + + +DPR +DV EP ++D G
Sbjct: 176 LLKPKTSRNSSHECFLLCQDFFV-SNVDPRFMDV----DCEPEPNIIIDCGFG 223
>gi|20090152|ref|NP_616227.1| 23S RNA methyltransferase J [Methanosarcina acetivorans C2A]
gi|74532956|sp|Q8TR92.1|RLME_METAC RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|19915136|gb|AAM04707.1| 23S RNA methyltransferase J [Methanosarcina acetivorans C2A]
Length = 272
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 128/215 (59%), Gaps = 7/215 (3%)
Query: 9 RLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGS 68
R D YY AKE GYRSRAS+KL Q++ K + ++ +V+DL AAPGGW+QVA Q G
Sbjct: 5 RRDYYYHQAKEEGYRSRASFKLKQINEKHNVIKRGDSVVDLGAAPGGWLQVAKQLS--GG 62
Query: 69 LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWA 128
VLG+DL IAPI G +++ DI + +KK++ G + D+VL D +PN+ G W+
Sbjct: 63 KVLGVDLQRIAPIEGVETIQGDIN---ADSTIKKIIRAVGEKGADVVLCDAAPNLSGNWS 119
Query: 129 QEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASR 188
+ L +++ A + L PKG FV KVF+ ++ L ++ F V+ P ASR
Sbjct: 120 YDHARSIELTTSALECAKKILKPKGNFVVKVFQGDMFNDYLEKVRDNFVHVKAYSPQASR 179
Query: 189 SASAEIYLLGIKY-KAPA-KIDPRLLDVKYLFQGS 221
S SAEIY++G K+ AP + D ++D++ L G
Sbjct: 180 SQSAEIYVIGKKFLTAPLRRGDKFVVDIEKLGSGG 214
>gi|225712472|gb|ACO12082.1| ribosomal RNA methyltransferase 1 [Lepeophtheirus salmonis]
Length = 297
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 131/214 (61%), Gaps = 5/214 (2%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSS-HAVLDLCAAPGGWMQV 59
MG+ K + D YYRLAKE G+R+R+++KL+Q++ +F+ + S V+DLCAAPG W QV
Sbjct: 1 MGR-SSKDKRDIYYRLAKEEGWRARSAFKLIQINDEFNLINSDVQNVVDLCAAPGSWSQV 59
Query: 60 AVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDG 119
+++ S+++ +DL +API G ++L+ DITK + +K++ +LV+ DG
Sbjct: 60 LAKKITGKSVIVAVDLQAMAPIPGVITLQGDITK---LSTAEKIISYFDGSLAELVVCDG 116
Query: 120 SPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKV 179
+P+V G + Q L++ ++ + T L P G+FV K+FR +D S++ L+ F+ V
Sbjct: 117 APDVTGLHDIDEYIQGHLLLAALNITTHILKPGGSFVAKIFRGKDVSTIYSQLRLFFDSV 176
Query: 180 EVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLD 213
V KP +SR++S E +++ Y P P +++
Sbjct: 177 YVAKPPSSRNSSKESFVVCQNYNPPPGFVPCMIN 210
>gi|452823766|gb|EME30774.1| FtsJ-like methyltransferase family protein [Galdieria sulphuraria]
Length = 299
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 124/216 (57%), Gaps = 8/216 (3%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYR AKE GYR+R+++KL+QLD +F+ + + V+DLCAAPG W QV
Sbjct: 1 MGRT-SKDKRDIYYRKAKEEGYRARSAYKLLQLDQEFNLFKDAENVVDLCAAPGSWSQVV 59
Query: 61 VQRV----PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
+R+ + ++ +DL IAPI G ++ DIT R V+ +++E D+VL
Sbjct: 60 SKRLRELRKGQATIVAVDLQEIAPIEGVTVIQGDITS---RPTVETILKEFENGMVDVVL 116
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
DG+P+V G + Q+ L++ ++ +AT L GTFV KVFR +D V L F
Sbjct: 117 SDGAPDVTGLHDLDEYIQSELILSALNVATFLLRQGGTFVAKVFRGKDTCGVFSRLSVFF 176
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLL 212
E V + KP +SR++S E + + Y P+ P L
Sbjct: 177 ENVTLAKPRSSRNSSIEAFFVCRGYSRPSFWQPTLF 212
>gi|289192039|ref|YP_003457980.1| ribosomal RNA large subunit methyltransferase J [Methanocaldococcus
sp. FS406-22]
gi|288938489|gb|ADC69244.1| ribosomal RNA large subunit methyltransferase J [Methanocaldococcus
sp. FS406-22]
Length = 246
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 118/195 (60%), Gaps = 7/195 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D YY+LAK+ YRSRAS+KL+QL+ KF+ ++ VLDL APGGWMQVA + V +
Sbjct: 15 DFYYKLAKKLKYRSRASFKLMQLNEKFNVIKPGKIVLDLGCAPGGWMQVAREIVGDKGFI 74
Query: 71 LGLDLVPIAPIR--GAVSLEQDITKPECRARVKKVM--EEHGVRAFDLVLHDGSPNVGGA 126
+G+DL P+ P V+++ D T E ++++++ EE V D+V+ D SPN+ G
Sbjct: 75 IGIDLQPVKPFEYDNVVAIKGDFTLEESLNKIRELIPNEEKKV---DVVISDASPNISGY 131
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
W + LV ++++AT+ L +G FV KVF + +K+ FEKV + KP A
Sbjct: 132 WDIDHARSIDLVTTALQIATEMLKERGNFVAKVFYGDMIDDYVNLVKKYFEKVYITKPQA 191
Query: 187 SRSASAEIYLLGIKY 201
SR SAE+Y++ +Y
Sbjct: 192 SRKESAEVYVIAKRY 206
>gi|406604199|emb|CCH44285.1| putative ribosomal RNA methyltransferase [Wickerhamomyces ciferrii]
Length = 304
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/221 (37%), Positives = 123/221 (55%), Gaps = 14/221 (6%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+QL+ +F + V+DLCAAPG W QV
Sbjct: 1 MGK-SSKDKRDLYYRKAKEEGWRARSAFKLLQLNDQFQLFKGVRRVVDLCAAPGSWSQVL 59
Query: 61 VQRV----------PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVR 110
+ + + ++ +DL P+API G +L+ DIT P+ + K++E G
Sbjct: 60 SRELFEKNQYTANDEIPPKIVAVDLQPMAPIDGVTTLQADITHPK---TLSKILEIFGGE 116
Query: 111 AFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLY 170
D V DG+P+V G + Q L++ +++L T L P GTFV K+FR +D +
Sbjct: 117 PADFVCSDGAPDVTGLHDLDEYIQAQLILAALQLTTCLLRPGGTFVAKIFRGRDIDLMYS 176
Query: 171 CLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
L LFEKV KP +SR S E +++ + YK + P L
Sbjct: 177 QLGYLFEKVICAKPRSSRGTSLEAFIVCLGYKPSSHWKPTL 217
>gi|403217673|emb|CCK72166.1| hypothetical protein KNAG_0J00840 [Kazachstania naganishii CBS
8797]
Length = 311
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 123/218 (56%), Gaps = 11/218 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE GYR+R+++KL+QL+ +F FL V+DLCAAPG W QV
Sbjct: 1 MGK-SSKDKRDLYYRKAKELGYRARSAFKLLQLNEEFHFLDDLERVVDLCAAPGSWSQVL 59
Query: 61 VQRV-------PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFD 113
+++ G ++ +DL P++PI + + DIT P+ +R+ +E G D
Sbjct: 60 SRKMFDEAEGDVQGKKIVAVDLQPMSPIDNVTTFQADITHPKTLSRI---LELFGNEKAD 116
Query: 114 LVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLK 173
V DG+P+V G + Q L++ +++L T L P G FV K+FR +D + L
Sbjct: 117 FVCSDGAPDVTGLHDLDEYVQQQLIMSALQLTTCVLKPHGNFVAKIFRGRDIDMLYSQLG 176
Query: 174 QLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
LF+ V KP +SR S E +++ + Y+ PA P+L
Sbjct: 177 YLFKSVVCAKPRSSRGTSLEAFIVCLDYQPPANWSPKL 214
>gi|393908901|gb|EFO23015.2| hypothetical protein LOAG_05470 [Loa loa]
Length = 351
Score = 146 bits (369), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 131/219 (59%), Gaps = 12/219 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYRLAKE G+R+R+++KL+Q+D +F+ + H V+DLCAAPG W QV
Sbjct: 1 MGKT-SKDKRDIYYRLAKEEGWRARSAFKLMQIDDEFNIFENVHRVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGS--------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAF 112
++V ++ +DL P++P+ G + L+ DIT+ ++ E G++A
Sbjct: 60 SKKVYFAEDEGRRKDIRIVAVDLQPMSPLPGVIQLQGDITETSTAEKIISYFE--GLKA- 116
Query: 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCL 172
DLV+ DG+P+V G A + Q+ LV+ ++ +AT L GTFV KVFR++D + + L
Sbjct: 117 DLVVCDGAPDVTGLHALDEYMQSQLVLAALNIATFVLKETGTFVAKVFRARDITLLYAQL 176
Query: 173 KQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
K F++V KP +SR +S E +++ ++ P P +
Sbjct: 177 KIFFKEVYCAKPRSSRQSSCEAFVVCKEFNLPKGYTPTM 215
>gi|402579651|gb|EJW73603.1| hypothetical protein WUBG_15490, partial [Wuchereria bancrofti]
Length = 220
Score = 146 bits (368), Expect = 5e-32, Method: Composition-based stats.
Identities = 85/196 (43%), Positives = 118/196 (60%), Gaps = 8/196 (4%)
Query: 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCL 172
D VLHDG+PNVG W Q+A QN L + +++LATQ L G FVTK+FRS DY ++
Sbjct: 28 DCVLHDGAPNVGRNWVQDAFQQNCLTLSALRLATQILTKNGIFVTKIFRSSDYCHLISVF 87
Query: 173 KQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVL- 231
++LF++V V KPAASR SAEI+++ KY+ PAK++P LLD K +F S + ++
Sbjct: 88 EKLFKQVHVWKPAASRLESAEIFVVCEKYQKPAKLNPDLLDPKKVFAESTQQSVTLNPQL 147
Query: 232 ----RGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKD 287
R +K GYE+ +L K ATDFI SNN LE+L S I D +
Sbjct: 148 MLQPRAKLKKVPATGYENESVSLHKTINATDFIHSNNYLELLASAYKIALDD---ERWLN 204
Query: 288 HELTTEEVKALCDDLR 303
+E TT+EVK +D++
Sbjct: 205 NESTTDEVKCCLEDIK 220
>gi|298674755|ref|YP_003726505.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanohalobium
evestigatum Z-7303]
gi|298287743|gb|ADI73709.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanohalobium
evestigatum Z-7303]
Length = 255
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 121/197 (61%), Gaps = 6/197 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D +YRLAK+ GYRSRA++KL+Q++++F+ + + ++DL AAPGGW+QVA R + V
Sbjct: 6 DSFYRLAKDEGYRSRAAYKLLQINNRFNVIEKNDTIVDLGAAPGGWLQVA--RKISNNKV 63
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL I I G +++ D+T ++ K +E+ GV D+V+ D +PN+ G W +
Sbjct: 64 VGIDLQRIKSIEGVETVKGDMTSDRTVRKILKTIEDEGV---DVVISDAAPNLSGNWNLD 120
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
LV +++ A Q L P G FV KVF+ ++ L +K F V+ +P ASRS
Sbjct: 121 HARSIDLVESALEFAKQVLKPSGNFVVKVFQGDMFNDFLEKVKNNFAYVKAHEPKASRSQ 180
Query: 191 SAEIYLLGIKY-KAPAK 206
SAEIY++G+ + P K
Sbjct: 181 SAEIYVIGMDFLNTPVK 197
>gi|261403094|ref|YP_003247318.1| ribosomal RNA large subunit methyltransferase J [Methanocaldococcus
vulcanius M7]
gi|261370087|gb|ACX72836.1| ribosomal RNA large subunit methyltransferase J [Methanocaldococcus
vulcanius M7]
Length = 248
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 118/195 (60%), Gaps = 7/195 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D YY+LAK+ YRSRAS+KL+QL+ KF+ ++ +LDL APGGWMQVA + V V
Sbjct: 15 DFYYKLAKKLQYRSRASFKLMQLNEKFNVIKPRKIILDLGCAPGGWMQVAREIVGDDGFV 74
Query: 71 LGLDLVPIAPIR--GAVSLEQDITKPECRARVKKVM--EEHGVRAFDLVLHDGSPNVGGA 126
+G+DL P+ P V+++ D T E ++++++ EE V D+V+ D SPN+ G
Sbjct: 75 IGVDLQPVKPFGYDNVVAIKGDFTSEETLNKIRELIPNEEKKV---DVVISDASPNISGY 131
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
W + LV ++++AT+ L +G FV KVF + +K+ FEKV + KP A
Sbjct: 132 WDVDHARSIDLVTTALQIATEMLKERGNFVAKVFYGDMIDDYVKLVKKYFEKVYITKPQA 191
Query: 187 SRSASAEIYLLGIKY 201
SR SAE+Y++ +Y
Sbjct: 192 SRKESAEVYVIAKRY 206
>gi|288932082|ref|YP_003436142.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Ferroglobus placidus DSM
10642]
gi|288894330|gb|ADC65867.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Ferroglobus placidus DSM
10642]
Length = 197
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 116/192 (60%), Gaps = 8/192 (4%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
K R D YY AK+ GYRSRA++KL Q+++KF ++ + VLDL A+PGGW QVAV+ +
Sbjct: 2 KDRQDYYYWKAKKEGYRSRAAYKLKQINAKFEIIKKGYHVLDLGASPGGWSQVAVE---L 58
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
G+ V+ +DL P+ PI G V ++ DITK E + ++K+ ++ FD+VL D SP + G
Sbjct: 59 GADVVAVDLNPMKPIEGVVFIKGDITKEETKEEIRKIRDK-----FDVVLCDASPKITGK 113
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
W + L + +A +FL P G FV K+F+ + V+ K+ F ++ P A
Sbjct: 114 WDLDHFLSMELAKAAFDIAKEFLKPGGNFVVKLFQGAELEEVVREFKKYFRFKKLHAPPA 173
Query: 187 SRSASAEIYLLG 198
SR SAEIY +G
Sbjct: 174 SRKRSAEIYFIG 185
>gi|15669566|ref|NP_248379.1| cell division protein FtsJ [Methanocaldococcus jannaschii DSM 2661]
gi|3023819|sp|Q58771.1|RLME_METJA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|1592021|gb|AAB99383.1| cell division protein FtsJ [Methanocaldococcus jannaschii DSM 2661]
Length = 245
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 117/193 (60%), Gaps = 3/193 (1%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D YY+LAK+ YRSRAS+KL+QL+ KF+ ++ VLDL APGGWMQVA + V V
Sbjct: 15 DFYYKLAKKLKYRSRASFKLMQLNEKFNVIKPGKIVLDLGCAPGGWMQVAREIVGDKGFV 74
Query: 71 LGLDLVPIAPIR--GAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWA 128
+G+DL P+ P V+++ D T E ++++++ + + D+V+ D SPN+ G W
Sbjct: 75 IGIDLQPVKPFEYDNVVAIKGDFTLEENLNKIRELI-PNDEKKVDVVISDASPNISGYWD 133
Query: 129 QEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASR 188
+ LV ++++AT+ L +G FV KVF + +K+ FEKV + KP ASR
Sbjct: 134 IDHARSIDLVTTALQIATEMLKERGNFVAKVFYGDMIDDYVNLVKKYFEKVYITKPQASR 193
Query: 189 SASAEIYLLGIKY 201
SAE+Y++ +Y
Sbjct: 194 KESAEVYVIAKRY 206
>gi|50289623|ref|XP_447243.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526552|emb|CAG60176.1| unnamed protein product [Candida glabrata]
Length = 309
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 85/224 (37%), Positives = 127/224 (56%), Gaps = 17/224 (7%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHA--VLDLCAAPGGWMQ 58
MGK K + D YYR AKE GYR+R+++KL+QL+ +F FL V+DLCAAPG W Q
Sbjct: 1 MGK-SSKDKRDLYYRKAKEEGYRARSAYKLLQLNEEFHFLDDPELKRVVDLCAAPGSWSQ 59
Query: 59 VA-----VQRVPVGS------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEH 107
V +R PV ++ +DL P++PI ++L+ DIT P ++++ E
Sbjct: 60 VLSRKLFAEREPVADGQEDDRKIIAVDLQPMSPIDHVITLQADITHPR---TLERIYELF 116
Query: 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSS 167
G + D V DG+P+V G + Q+ L++ +++L T L GTFV K+FR +D
Sbjct: 117 GNQKADFVCSDGAPDVTGLHDLDEYIQHQLIMSALQLTTCVLKRGGTFVAKIFRGRDIDM 176
Query: 168 VLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
+ L LFEK+ KP +SR S E +++ I Y PA +P+L
Sbjct: 177 LYSQLGYLFEKIVCAKPRSSRGTSLEAFIVCIGYNPPAGWEPKL 220
>gi|448103650|ref|XP_004200088.1| Piso0_002654 [Millerozyma farinosa CBS 7064]
gi|359381510|emb|CCE81969.1| Piso0_002654 [Millerozyma farinosa CBS 7064]
Length = 332
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 122/207 (58%), Gaps = 9/207 (4%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQV- 59
MGK K + D YYR AKE G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 33 MGK-SSKDKRDLYYRKAKEDGWRARSAFKLLQLDEEFDLFKDVKRAVDLCAAPGSWSQVL 91
Query: 60 ---AVQRVPVGSL-VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV 115
Q+ P + ++ +DL P++PI G +++ DIT P+ ++K++E G D V
Sbjct: 92 SREIYQKRPKEEVKLVAVDLQPMSPIEGITTIQADITHPK---TLQKILEIFGGEPADFV 148
Query: 116 LHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL 175
DG+P+V G + Q+ L++ +++L T L P GTFV K+FR +D + L L
Sbjct: 149 CSDGAPDVTGLHDLDEYIQSQLILAALQLTTCVLKPGGTFVAKIFRGRDIDLLYSQLSYL 208
Query: 176 FEKVEVDKPAASRSASAEIYLLGIKYK 202
FE+V KP ASR S E +++ I YK
Sbjct: 209 FERVICAKPRASRGTSLEAFIVCIGYK 235
>gi|213403496|ref|XP_002172520.1| tRNA 2'-O-ribose methyltransferase [Schizosaccharomyces japonicus
yFS275]
gi|212000567|gb|EEB06227.1| tRNA 2'-O-ribose methyltransferase [Schizosaccharomyces japonicus
yFS275]
Length = 280
Score = 145 bits (366), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 125/217 (57%), Gaps = 10/217 (4%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQV- 59
MG+ K + D YYR+AKE G+R+R+++KL+QL+ +F + V+DLCAAPG W QV
Sbjct: 1 MGR-SSKDKRDAYYRMAKEQGWRARSAFKLLQLNEQFDLFKGVRRVVDLCAAPGSWSQVL 59
Query: 60 ---AVQRVPVG--SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114
VQ VP ++ +DL P+AP+ G +L+ DIT P+ + ++ G DL
Sbjct: 60 SRELVQNVPASERPTIVSVDLQPMAPLEGVCTLQLDITHPD---TLPIILSHFGDEPADL 116
Query: 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQ 174
V+ DG+P+V G + Q +++ ++ LA L P GTFV K+FR +D S + L+
Sbjct: 117 VVSDGAPDVTGLHDLDEYIQAQILLAAMNLAACVLRPGGTFVAKIFRGRDVSLLYSQLRL 176
Query: 175 LFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
LF+ V KP +SR++S E +++ + P P L
Sbjct: 177 LFKHVTCAKPRSSRASSLEAFVVCQDFCPPEGFKPNL 213
>gi|302779940|ref|XP_002971745.1| hypothetical protein SELMODRAFT_95614 [Selaginella moellendorffii]
gi|300160877|gb|EFJ27494.1| hypothetical protein SELMODRAFT_95614 [Selaginella moellendorffii]
Length = 297
Score = 145 bits (366), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 87/226 (38%), Positives = 132/226 (58%), Gaps = 18/226 (7%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+Q+D +F L+ V+DLCAAPG W QV
Sbjct: 1 MGK-SSKDKRDIYYRKAKEEGWRARSAFKLLQIDEEFGILQGVKRVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGS---------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEH--GV 109
+++ V S L++ +DL P+API G V ++ DIT AR +++ +H G
Sbjct: 60 SRQLYVPSKSDKQDDRPLIVAIDLQPMAPIDGVVQIQGDITS----ARTAELVIQHFHGC 115
Query: 110 RAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVL 169
+A DLV+ DG+P+V G + Q L++ ++ + T L P FV KVFR +D S +
Sbjct: 116 QA-DLVVCDGAPDVTGLHDMDEFVQAQLILAALTIVTHVLRPGAKFVAKVFRGKDISLLY 174
Query: 170 YCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPR-LLDV 214
LK F V KP +SR++S E +++ Y+ P +PR L D+
Sbjct: 175 AQLKMFFTTVTCTKPKSSRNSSIEAFVVCEDYQPPEGFEPRNLYDI 220
>gi|21228390|ref|NP_634312.1| methyltransferase [Methanosarcina mazei Go1]
gi|74523704|sp|Q8PUP4.1|RLME_METMA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|20906862|gb|AAM31984.1| methyltransferase [Methanosarcina mazei Go1]
Length = 268
Score = 145 bits (366), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 128/213 (60%), Gaps = 7/213 (3%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+ R D YY AKE GYRSRAS+KL Q++ K + ++ +V+DL AAPGGW+QVA Q
Sbjct: 3 RDRRDYYYHQAKEEGYRSRASFKLKQINEKHNVIKRGDSVVDLGAAPGGWLQVAKQLS-- 60
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
G VLG+DL I PI G +++ DI + +KK+++ G + D+VL D +PN+ G
Sbjct: 61 GGKVLGVDLQRIDPIEGVETIQGDIN---AESTIKKIIKIVGEKGADVVLCDAAPNLSGN 117
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
W+ + L +++ A + L PKG F KVF+ ++ L ++ F +V+ P A
Sbjct: 118 WSYDHARSIELATSALECAKKILKPKGNFAVKVFQGDMFNDYLDEVRNNFVRVKAYSPQA 177
Query: 187 SRSASAEIYLLGIKY-KAPA-KIDPRLLDVKYL 217
SRS SAEIY++G K+ AP K D ++D++ L
Sbjct: 178 SRSQSAEIYIIGKKFLTAPLRKGDKFVVDIEKL 210
>gi|402589089|gb|EJW83021.1| cell division protein [Wuchereria bancrofti]
Length = 348
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 131/219 (59%), Gaps = 12/219 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYRLAKE G+R+R+++KL+Q+D +F+ H V+DLCAAPG W QV
Sbjct: 1 MGKT-SKDKRDIYYRLAKEEGWRARSAFKLMQIDDEFNIFEGVHRVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGS--------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAF 112
++V ++ +DL P++P+ G + L+ DIT+ C A+ K + G +A
Sbjct: 60 SKKVYFAQDDEKRKAIRIVAVDLQPMSPLPGIIQLQGDITE-ACTAK-KIISYLEGSKA- 116
Query: 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCL 172
DLV+ DG+P+V G A + Q+ LV+ ++ +AT L GTFV K+FR++D + + L
Sbjct: 117 DLVICDGAPDVTGLHALDEYMQSQLVLAALNIATFVLKEAGTFVAKIFRARDITLLYAQL 176
Query: 173 KQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
K F++V KP +SR +S E +++ + P + P +
Sbjct: 177 KIFFKEVYCAKPRSSRQSSCEAFVVCNGFSLPKRYTPTM 215
>gi|313237227|emb|CBY12443.1| unnamed protein product [Oikopleura dioica]
Length = 317
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 129/213 (60%), Gaps = 6/213 (2%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG ++ K + D YYRLAKE G+R+R+++KL+Q+D +F ++ V+DLCAAPG W QV
Sbjct: 1 MG-IRSKDKRDIYYRLAKEQGWRARSAFKLLQIDERFDLFKNVTKVVDLCAAPGSWSQVL 59
Query: 61 VQRV--PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
+++ + ++ +DL P+API + ++ DIT E + + G +A DLV+ D
Sbjct: 60 SKKLKDKENAKIVSVDLQPMAPIDNVICIQGDITSQETSDEI--ITHFDGGKA-DLVVCD 116
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+P+V G + Q+ L++ + ++T L+P GTFV+K+FR +D + + + F+
Sbjct: 117 GAPDVTGLHDLDEYIQSQLILAAFNISTFVLSPGGTFVSKIFRGRDCDLIFHQFQMFFKN 176
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
V + KP +SR++S E +++ I + P P L
Sbjct: 177 VYLAKPRSSRASSVEAFVVAIDFCPPDGYVPSL 209
>gi|256809981|ref|YP_003127350.1| ribosomal RNA large subunit methyltransferase J [Methanocaldococcus
fervens AG86]
gi|256793181|gb|ACV23850.1| ribosomal RNA large subunit methyltransferase J [Methanocaldococcus
fervens AG86]
Length = 246
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 117/199 (58%), Gaps = 15/199 (7%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D YY+LAK+ YRSRAS+KL+QL+ KF+ ++ VLDL APGGWMQVA + V V
Sbjct: 15 DFYYKLAKKLKYRSRASFKLMQLNEKFNVIKPGRIVLDLGCAPGGWMQVAREIVGDKGFV 74
Query: 71 LGLDLVPIAP--------IRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPN 122
+G+DL P+ P I+G +LE+++ K R + EE V D+V+ D SPN
Sbjct: 75 IGIDLQPVKPFEYDNVRAIKGDFTLEENLNK--IRELIPN--EEKKV---DVVISDASPN 127
Query: 123 VGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVD 182
+ G W + LV ++++AT+ L +G FV KVF + +K+ FEKV +
Sbjct: 128 ISGYWDVDHARSIDLVTTALQIATEMLKERGNFVAKVFYGNMIDDYVKLVKKYFEKVYIT 187
Query: 183 KPAASRSASAEIYLLGIKY 201
KP ASR SAE+Y++ +Y
Sbjct: 188 KPQASRKESAEVYVIAKRY 206
>gi|290560982|gb|ADD37893.1| ribosomal RNA methyltransferase 1 [Lepeophtheirus salmonis]
Length = 297
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 130/214 (60%), Gaps = 5/214 (2%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSS-HAVLDLCAAPGGWMQV 59
MG+ K + D YYRLAKE G+R+R+++KL+Q++ +F+ + S V+DLCAAPG W QV
Sbjct: 1 MGR-SSKDKRDIYYRLAKEEGWRARSAFKLIQINDEFNLINSDVQNVVDLCAAPGSWSQV 59
Query: 60 AVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDG 119
+++ S+++ +DL +API G ++L+ DITK + +K++ +LV+ DG
Sbjct: 60 LAKKITGKSVIVAVDLQAMAPIPGVITLQGDITK---LSTAEKIISYFDGSLAELVVCDG 116
Query: 120 SPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKV 179
+P+ G + Q L++ ++ + T L P G+FV K+FR +D S++ L+ F+ V
Sbjct: 117 APDATGLHDIDEYIQGHLLLAALNITTHILKPGGSFVAKIFRGKDVSTIYSQLRLFFDSV 176
Query: 180 EVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLD 213
V KP +SR++S E +++ Y P P +++
Sbjct: 177 FVAKPPSSRNSSKESFVVCQNYNPPPGFVPCMIN 210
>gi|367013286|ref|XP_003681143.1| hypothetical protein TDEL_0D03480 [Torulaspora delbrueckii]
gi|359748803|emb|CCE91932.1| hypothetical protein TDEL_0D03480 [Torulaspora delbrueckii]
Length = 299
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/218 (38%), Positives = 127/218 (58%), Gaps = 11/218 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFL--RSSHAVLDLCAAPGGWMQ 58
MGK K + D YYR AKE GYR+R+++KL+QL+ F FL S V+DLCAAPG W Q
Sbjct: 1 MGK-SSKDKRDLYYRKAKEEGYRARSAYKLLQLNDNFHFLDDPSLKRVVDLCAAPGSWSQ 59
Query: 59 VAVQRVPVGS-----LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFD 113
V +++ GS ++ +DL ++PI +L+ DIT P ++++++ G D
Sbjct: 60 VLSRKLFEGSDQQDRRIVAVDLQTMSPIDHVTTLQADITHPR---TLQRILQLFGDEPAD 116
Query: 114 LVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLK 173
LV+ DG+P+V G + Q LV+ +++LA L PKG+F+ KVFR +D + L
Sbjct: 117 LVISDGAPDVTGLHDLDEYVQQQLVMSALQLACCVLKPKGSFIAKVFRGRDIDLLYSQLA 176
Query: 174 QLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
LF V KP +SRS S E +++ Y+ PA P+L
Sbjct: 177 CLFTHVTCAKPRSSRSTSLEAFVVCQGYQPPADWTPKL 214
>gi|156547729|ref|XP_001605414.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like isoform
1 [Nasonia vitripennis]
Length = 311
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 127/216 (58%), Gaps = 8/216 (3%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+Q+D +F+ +DLCAAPG W QV
Sbjct: 1 MGKT-SKDKRDIYYRRAKEEGWRARSAFKLLQIDDEFNIFNGVTKAVDLCAAPGSWSQVL 59
Query: 61 VQRVP--VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
Q V ++ +DL +API G V ++ DIT ++++ G DLV+ D
Sbjct: 60 SQTSTDVVAPKIIAVDLQAMAPIEGVVQIQGDITN---VTTAEQIIAHFGNEHADLVVCD 116
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYC-LKQLFE 177
G+P+V G + Q+ L++ ++K+ TQ L PKGTFV K+FR++D +S+LY LK F
Sbjct: 117 GAPDVTGLHDMDIYIQSQLLLAALKITTQILKPKGTFVAKIFRAKD-ASLLYSQLKIFFT 175
Query: 178 KVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLD 213
V KP +SR++S E +++ + P +P L+
Sbjct: 176 SVTCAKPRSSRNSSFEAFVVCKDFCPPEGFEPSSLN 211
>gi|313242586|emb|CBY34717.1| unnamed protein product [Oikopleura dioica]
Length = 317
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 129/213 (60%), Gaps = 6/213 (2%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG ++ K + D YYRLAKE G+R+R+++KL+Q+D +F ++ V+DLCAAPG W QV
Sbjct: 1 MG-IRSKDKRDIYYRLAKEQGWRARSAFKLLQIDERFDLFKNVTKVVDLCAAPGSWSQVL 59
Query: 61 VQRV--PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
+++ + ++ +DL P+API + ++ DIT E + + G +A DLV+ D
Sbjct: 60 SKKLKDKENAKIVSVDLQPMAPIDNVICIQGDITSQETSDEI--IAHFDGGKA-DLVVCD 116
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+P+V G + Q+ L++ + ++T L+P GTFV+K+FR +D + + + F+
Sbjct: 117 GAPDVTGLHDLDEYIQSQLILAAFNISTFVLSPGGTFVSKIFRGRDCDLIFHQFQMFFKN 176
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
V + KP +SR++S E +++ I + P P L
Sbjct: 177 VYLAKPRSSRASSVEAFVVAIDFCPPDGYVPSL 209
>gi|145347186|ref|XP_001418056.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578284|gb|ABO96349.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 297
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 127/223 (56%), Gaps = 15/223 (6%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+Q+D F R V+DLCAAPG W QV
Sbjct: 1 MGK-SSKDKRDIYYRKAKEEGWRARSAFKLLQIDESFDIFRDVRHVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGSL-----------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGV 109
+++ + +L ++ +DL P+API G +++ DIT + +V++V+
Sbjct: 60 SRKLYLPALARGVEEEELPKIVAIDLQPMAPIEGVTTIQGDITSMD---KVREVLSHFDG 116
Query: 110 RAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVL 169
+ DL++ DG+P+V G + Q L++ + +AT L P GTF+ K+FR +D S +
Sbjct: 117 KHADLIVGDGAPDVTGLHDLDEFMQAQLILAGLTVATHILKPGGTFIAKIFRGKDISLLY 176
Query: 170 YCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLL 212
LK F +V KP +SR++S E +++ Y P +P L
Sbjct: 177 SQLKIFFPEVTCAKPKSSRNSSIEAFIVCQGYSPPEGFEPHQL 219
>gi|384248902|gb|EIE22385.1| FtsJ-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 298
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/222 (37%), Positives = 126/222 (56%), Gaps = 14/222 (6%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+Q+D FS L V+DLCAAPG W QV
Sbjct: 1 MGKAS-KDKRDIYYRKAKEEGWRARSAFKLLQIDEAFSILEGVRHVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGSL----------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVR 110
+R+ + +L ++ +DL P+API G ++ DIT +V + HG +
Sbjct: 60 SRRLYLPALQAGRPEDAPKIVAVDLQPMAPIEGVTQIQGDITSTLTANQV--ISHFHGEK 117
Query: 111 AFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLY 170
A DLV+ DG+P+V G + Q L++ ++ + T L P G+FV KVFR ++ + +
Sbjct: 118 A-DLVVSDGAPDVTGLHDMDEFVQAQLILAALTIVTHVLRPGGSFVAKVFRGKEAALLYS 176
Query: 171 CLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLL 212
LK LF V + KP +SR++S E +++ Y P P L
Sbjct: 177 QLKILFPDVTIAKPKSSRNSSIEAFVVCRNYTPPPNFRPEAL 218
>gi|320581605|gb|EFW95825.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Ogataea parapolymorpha
DL-1]
Length = 299
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 119/206 (57%), Gaps = 8/206 (3%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+QL+ +F + H V+DLCAAPG W QV
Sbjct: 1 MGK-SSKDKRDVYYRKAKEEGWRARSAYKLLQLNEQFGLFNNIHRVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVG----SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
+ + + ++ +DL P+API V+L+ DIT P + K++ G D V
Sbjct: 60 SREIFKNERSDAQIVAVDLQPMAPIDDVVTLQADITDPR---TLDKILHIFGGEKADFVC 116
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
DG+P+V G + Q LV+ +++LAT L GTFV K+FR +D + L LF
Sbjct: 117 SDGAPDVTGLHDLDEYIQAQLVLCALRLATCLLKEGGTFVAKIFRGRDIDLLYSQLGFLF 176
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYK 202
EKV KP ASR S E +++ I Y+
Sbjct: 177 EKVVCAKPRASRGTSLESFIVCIGYR 202
>gi|336122117|ref|YP_004576892.1| ribosomal RNA large subunit methyltransferase E
[Methanothermococcus okinawensis IH1]
gi|334856638|gb|AEH07114.1| Ribosomal RNA large subunit methyltransferase E
[Methanothermococcus okinawensis IH1]
Length = 288
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 116/193 (60%), Gaps = 6/193 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D YY+LAK++ YRSRAS+KL+QL+ KF+ ++ + V+DL APGGW+Q A V G V
Sbjct: 15 DFYYKLAKKNKYRSRASYKLLQLNEKFNIIKENDVVVDLGCAPGGWLQAARDIVGEGGFV 74
Query: 71 LGLDLVPIAPIR--GAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWA 128
G+DL + P++ ++++ D+TK E ++ K++ D V+ D SPN+ G W
Sbjct: 75 AGVDLQGVKPLKYENVIAIKGDMTKKETIEKLMKLLPSKA----DAVICDASPNISGVWE 130
Query: 129 QEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASR 188
++ L ++ AT+ L G FV KVF+ ++ + LK F+KV+ KP ASR
Sbjct: 131 RDHTRSLELTTIALITATKLLKKDGNFVVKVFQGSLFNDYVALLKNYFKKVQTTKPKASR 190
Query: 189 SASAEIYLLGIKY 201
SAE+Y++G K+
Sbjct: 191 DVSAEVYVVGKKF 203
>gi|448099854|ref|XP_004199235.1| Piso0_002654 [Millerozyma farinosa CBS 7064]
gi|359380657|emb|CCE82898.1| Piso0_002654 [Millerozyma farinosa CBS 7064]
Length = 298
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 120/207 (57%), Gaps = 9/207 (4%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 1 MGK-SSKDKRDLYYRKAKEDGWRARSAFKLLQLDEEFDLFKDVKRAVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGSL-----VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV 115
+ + ++ +DL P++PI G +++ DIT P+ ++K++E G D V
Sbjct: 60 SREIYQKRHKEEVKLVAVDLQPMSPIEGITTIQADITHPK---TLQKILEIFGGEPADFV 116
Query: 116 LHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL 175
DG+P+V G + Q+ L++ +++L T L P GTFV K+FR +D + L L
Sbjct: 117 CSDGAPDVTGLHDLDEYIQSQLILAALQLTTCVLKPGGTFVAKIFRGRDIDLLYSQLSYL 176
Query: 176 FEKVEVDKPAASRSASAEIYLLGIKYK 202
FEKV KP ASR S E +++ I YK
Sbjct: 177 FEKVICAKPRASRGTSLEAFIVCIGYK 203
>gi|190345428|gb|EDK37311.2| hypothetical protein PGUG_01409 [Meyerozyma guilliermondii ATCC
6260]
Length = 293
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 125/225 (55%), Gaps = 10/225 (4%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+QLD +F V+DLCAAPG W QV
Sbjct: 1 MGK-SSKDKRDLYYRRAKEEGWRARSAFKLLQLDEEFGLFSGVKRVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGSL-----VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV 115
+ + S ++ +DL P+ PI G ++L+ DIT P+ ++++++ G D V
Sbjct: 60 SREIYKNSKGEDAKIVAVDLQPMTPIDGVITLQADITHPK---TLQRILDIFGGEPADFV 116
Query: 116 LHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL 175
DG+P+V G + Q LV+ +++L T L GTFV K+FR +D + L L
Sbjct: 117 CSDGAPDVTGLHDLDEYIQAQLVLCALQLTTCVLKEGGTFVAKIFRGRDIDLLYSQLGHL 176
Query: 176 FEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL-LDVKYLFQ 219
FE+V KP ASR S E +++ I YK P + L + FQ
Sbjct: 177 FERVVCAKPRASRGTSLEAFIVCIGYKPRPGWTPNIALSTEEFFQ 221
>gi|50424141|ref|XP_460657.1| DEHA2F06842p [Debaryomyces hansenii CBS767]
gi|49656326|emb|CAG88989.1| DEHA2F06842p [Debaryomyces hansenii CBS767]
Length = 301
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 122/216 (56%), Gaps = 9/216 (4%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+QL+ +F + V+DLCAAPG W QV
Sbjct: 1 MGK-SSKDKRDLYYRRAKEEGWRARSAFKLLQLNEQFQLFKGVKRVVDLCAAPGSWSQVL 59
Query: 61 VQRV-----PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV 115
+ + + ++ +DL P+ PI G +L+ DIT P+ ++K++E G D V
Sbjct: 60 SRELFENQKQADAKIVSVDLQPMTPIEGVTTLQADITHPK---TLQKILEIFGGEPADFV 116
Query: 116 LHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL 175
DG+P+V G + Q L++ +++L T L P G FV K+FR +D + L L
Sbjct: 117 CSDGAPDVTGLHDLDEYIQAQLILSALQLTTCILKPGGAFVAKIFRGRDIDLLYSQLSYL 176
Query: 176 FEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
FE+V KP +SR S E +++ + YK +P L
Sbjct: 177 FERVICAKPRSSRGTSLEAFIVCLGYKPREGWNPIL 212
>gi|384488193|gb|EIE80373.1| hypothetical protein RO3G_05078 [Rhizopus delemar RA 99-880]
Length = 290
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 129/229 (56%), Gaps = 17/229 (7%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYRLAKE G+R+R+++KL+QLD +F+FL+ +DLCAAPG W QV
Sbjct: 1 MGK-SSKDKRDVYYRLAKEEGWRARSAFKLLQLDEEFNFLQGIKRAVDLCAAPGSWSQVL 59
Query: 61 VQRVPVG---------SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRA 111
+R+ ++ +DL +AP+ G + L+ DITK + +K++
Sbjct: 60 SKRLSENHKETPDESEPKIVAVDLQAMAPLEGVIQLQGDITK---ESTAEKIISYFDGEL 116
Query: 112 FDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYC 171
D+V+ DG+P+V G + Q L++ ++ + T L P GTFV K+FR +D + +
Sbjct: 117 ADIVICDGAPDVTGLHDMDEYIQAQLLLAALNITTHVLRPGGTFVAKIFRGKDITLLYSQ 176
Query: 172 LKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPR----LLDVKY 216
LK F V KP +SR++S E +++ Y+ P P LLD++Y
Sbjct: 177 LKIFFPTVTCSKPRSSRNSSIEAFIVCQNYQPPKDYVPTMANPLLDLQY 225
>gi|308467426|ref|XP_003095961.1| hypothetical protein CRE_06935 [Caenorhabditis remanei]
gi|308244230|gb|EFO88182.1| hypothetical protein CRE_06935 [Caenorhabditis remanei]
Length = 331
Score = 143 bits (361), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 128/215 (59%), Gaps = 9/215 (4%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK R D YYRLAKE+ +R+R+++KL+Q+D +F L+ +DLCAAPG W QV
Sbjct: 1 MGKTSRDKR-DIYYRLAKENKWRARSAFKLMQIDDEFQILKGVRRAVDLCAAPGSWSQVL 59
Query: 61 VQRV---PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117
+R+ + ++ +DL P+API G + L+ DIT + +V+E D+V+
Sbjct: 60 SKRLFEEDKEAKIVAIDLQPMAPIPGVIQLQGDITSVDT---ANQVIEHFSGDKSDIVIC 116
Query: 118 DGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYC-LKQLF 176
DG+P+V G + + Q L++ + + + L P G F+ K+FRS++ SS+LY +K+ F
Sbjct: 117 DGAPDVTGIHSLDEFMQAELILAAFNITSHVLRPGGNFLAKIFRSRN-SSLLYAQMKRYF 175
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
+KV + KP +SR +S E ++L + Y P P +
Sbjct: 176 KKVYLAKPRSSRQSSCEAFVLCLDYSPPEGFVPTM 210
>gi|302819760|ref|XP_002991549.1| hypothetical protein SELMODRAFT_133851 [Selaginella moellendorffii]
gi|300140582|gb|EFJ07303.1| hypothetical protein SELMODRAFT_133851 [Selaginella moellendorffii]
Length = 302
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 132/231 (57%), Gaps = 23/231 (9%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+Q+D +F L+ V+DLCAAPG W QV
Sbjct: 1 MGK-SSKDKRDIYYRKAKEEGWRARSAFKLLQIDEEFGILQGVKRVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGS--------------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEE 106
+++ V S L++ +DL P+API G V ++ DIT AR +++ +
Sbjct: 60 SRQLYVPSKNLSLCSSRQDDRPLIVAIDLQPMAPIDGVVQIQGDITS----ARTAELVIQ 115
Query: 107 --HGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQD 164
HG +A DLV+ DG+P+V G + Q L++ ++ + T L P FV KVFR +D
Sbjct: 116 HFHGCKA-DLVVCDGAPDVTGLHDMDEFVQAQLILAALTIVTHVLRPGAKFVAKVFRGKD 174
Query: 165 YSSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPR-LLDV 214
S + LK F V KP +SR++S E +++ Y+ P +PR L D+
Sbjct: 175 ISLLYAQLKMFFTTVTCTKPKSSRNSSIEAFVVCEDYQPPEGFEPRNLYDI 225
>gi|448521064|ref|XP_003868416.1| Trm7 protein [Candida orthopsilosis Co 90-125]
gi|380352756|emb|CCG25512.1| Trm7 protein [Candida orthopsilosis]
Length = 299
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 121/215 (56%), Gaps = 5/215 (2%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE GYR+R+++KL+QLD +F+ L + V+DLCAAPG W QV
Sbjct: 1 MGKTS-KDKRDLYYRRAKEDGYRARSAYKLLQLDQQFNLLSNITRVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVG--SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGV--RAFDLVL 116
++ + ++ +DL P+ PI +L+ DIT P+ ++ ++ G D V
Sbjct: 60 SHKLGSNPDARIVAVDLQPMTPIDHVTTLQADITHPKTLQQILDCFKDGGKGDGLADFVC 119
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
DG+P+V G + Q+ LV + +L T L P G+FV K+FR +D + Y L + F
Sbjct: 120 SDGAPDVTGLHDLDEYVQHQLVWAAFQLTTCILKPGGSFVAKIFRGRDIDLMYYQLSKFF 179
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
KV KP +SR S E +++ + YK P+L
Sbjct: 180 TKVYCAKPRSSRGTSLEAFIVCLGYKPIPNWVPKL 214
>gi|365762119|gb|EHN03729.1| Trm7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401842223|gb|EJT44474.1| TRM7-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 310
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 129/241 (53%), Gaps = 17/241 (7%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHA--VLDLCAAPGGWMQ 58
MGK K + D YYR AKE GYR+R+++KL+QL+ +F FL + V+DLCAAPG W Q
Sbjct: 1 MGK-SSKDKRDLYYRKAKEQGYRARSAFKLLQLNEQFHFLDDPNLKRVVDLCAAPGSWSQ 59
Query: 59 VAVQRV--------PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVR 110
V +++ G ++ +DL P++PI +L+ DIT P+ AR+ K+ G
Sbjct: 60 VLSRKLFDEGAGGDSEGRKIVAVDLQPMSPISHVTTLQADITHPKTLARILKLF---GNE 116
Query: 111 AFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLY 170
D V DG+P+V G + Q L++ +++L L G FV K+FR +D +
Sbjct: 117 KADFVCSDGAPDVTGLHDLDEYVQQQLIMSALQLTACILKKGGIFVAKIFRGRDIDMLYS 176
Query: 171 CLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL---LDVKYLFQGSVEPRKV 227
L LF+K+ KP +SR S E +++ + Y P+ P+L V FQG R
Sbjct: 177 QLGHLFDKIVCAKPRSSRGTSLEAFIVCLGYNPPSNWTPKLDVNTSVDEFFQGCSLNRLC 236
Query: 228 V 228
+
Sbjct: 237 I 237
>gi|345484992|ref|XP_003425169.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like isoform
2 [Nasonia vitripennis]
Length = 322
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 80/226 (35%), Positives = 126/226 (55%), Gaps = 17/226 (7%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+Q+D +F+ +DLCAAPG W QV
Sbjct: 1 MGKT-SKDKRDIYYRRAKEEGWRARSAFKLLQIDDEFNIFNGVTKAVDLCAAPGSWSQVL 59
Query: 61 VQRVP-------------VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEH 107
+R+ V ++ +DL +API G V ++ DIT ++++
Sbjct: 60 SRRLNQNYQKLKETSTDVVAPKIIAVDLQAMAPIEGVVQIQGDITN---VTTAEQIIAHF 116
Query: 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSS 167
G DLV+ DG+P+V G + Q+ L++ ++K+ TQ L PKGTFV K+FR++D S
Sbjct: 117 GNEHADLVVCDGAPDVTGLHDMDIYIQSQLLLAALKITTQILKPKGTFVAKIFRAKDASL 176
Query: 168 VLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLD 213
+ LK F V KP +SR++S E +++ + P +P L+
Sbjct: 177 LYSQLKIFFTSVTCAKPRSSRNSSFEAFVVCKDFCPPEGFEPSSLN 222
>gi|341889636|gb|EGT45571.1| hypothetical protein CAEBREN_14422 [Caenorhabditis brenneri]
Length = 350
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 127/215 (59%), Gaps = 9/215 (4%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK R D YYRLAKE+ +R+R+++KL+Q+D +F L+ +DLCAAPG W QV
Sbjct: 1 MGKTSRDKR-DIYYRLAKENKWRARSAFKLMQIDDEFQILKGVRRAVDLCAAPGSWSQVL 59
Query: 61 VQRV---PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117
+R+ + ++ +DL P+API G + L+ DIT + +V+E D+V+
Sbjct: 60 SKRLYEEDKDAKIVAIDLQPMAPIPGVIQLQGDITSVD---TANQVIEHFSGEKSDIVIC 116
Query: 118 DGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYC-LKQLF 176
DG+P+V G + + Q L++ + + + L G F+ K+FRS++ SS+LY +K+ F
Sbjct: 117 DGAPDVTGIHSLDEFMQAELILAAFNITSHVLKIGGNFLAKIFRSRN-SSLLYAQMKKYF 175
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
+KV + KP +SR +S E ++L + Y P P +
Sbjct: 176 KKVYLAKPRSSRQSSCEAFVLCLDYSPPEGFVPTM 210
>gi|303275988|ref|XP_003057288.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461640|gb|EEH58933.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 343
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 126/225 (56%), Gaps = 15/225 (6%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+Q+D F + V+DLCAAPG W QV
Sbjct: 1 MGK-SSKDKRDIYYRKAKEEGWRARSAFKLLQIDDSFDVFKDVKHVVDLCAAPGSWSQVI 59
Query: 61 VQRVPVGSL-----------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGV 109
+R+ + + ++ +DL P+API G V ++ DIT A+V +V+
Sbjct: 60 SRRLWIPARDAGTAAEDMPKIVAIDLQPMAPIEGVVQIQGDITS---LAKVNEVLTHFEG 116
Query: 110 RAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVL 169
+ DL++ DG+P+V G + Q L++ + + L P GT++ KVFR +D + +
Sbjct: 117 KLADLIVSDGAPDVTGLHDMDEFMQAQLILAGLAVCAHILRPGGTYIAKVFRGKDVALLY 176
Query: 170 YCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDV 214
LK F +V KP +SR++S E +++ ++ P DP+ L V
Sbjct: 177 AQLKMFFTQVTCAKPKSSRNSSVEAFVVCQDFRPPEGFDPKNLRV 221
>gi|150401023|ref|YP_001324789.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcus aeolicus
Nankai-3]
gi|189040311|sp|A6UUK5.1|RLME_META3 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|150013726|gb|ABR56177.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcus aeolicus
Nankai-3]
Length = 269
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 111/193 (57%), Gaps = 6/193 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D YY+LAK++ YRSRAS+KL+QL+ KF + V+DL APGGW+Q + V V
Sbjct: 15 DFYYKLAKQNHYRSRASYKLLQLNEKFEIIYEGDNVVDLGCAPGGWLQASYDLVGEDGFV 74
Query: 71 LGLDLVPIAPIR--GAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWA 128
+G+DL + P+R V+++ D+TK E ++ +M D+V+ D SPN+ G W
Sbjct: 75 IGVDLQKVKPLREENIVAIQGDMTKKETINKIIDLMPSKA----DVVICDASPNISGVWE 130
Query: 129 QEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASR 188
+ L + ++ T L G FV KVF+ + + L + F+KV+ KP ASR
Sbjct: 131 VDHSRSIELSLMALIATTHLLRKNGNFVVKVFQGSLFDQYVQLLTKYFKKVQTTKPKASR 190
Query: 189 SASAEIYLLGIKY 201
S SAE+Y++G K+
Sbjct: 191 SVSAEVYVIGKKF 203
>gi|150950985|ref|XP_001387267.2| tRNA methyltransferase [Scheffersomyces stipitis CBS 6054]
gi|149388260|gb|EAZ63244.2| tRNA methyltransferase [Scheffersomyces stipitis CBS 6054]
Length = 301
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 119/217 (54%), Gaps = 11/217 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+QL +F L V+DLCAAPG W QV
Sbjct: 1 MGK-SSKDKRDIYYRRAKEQGWRARSAFKLLQLHDEFQILHGLKRVVDLCAAPGSWSQVL 59
Query: 61 V------QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114
Q P +V +DL P+ PI G ++ DIT P+ + K+++ G D
Sbjct: 60 SRELYQKQNQPDAKIV-AVDLQPMTPIDGVTCIQADITHPK---TLHKILDIFGGEPADF 115
Query: 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQ 174
V DG+P+V G + Q L++ +++L T L P GTFV K+FR +D + L
Sbjct: 116 VCSDGAPDVTGLHDLDEYIQAQLILSALQLTTCILKPGGTFVAKIFRGRDIDLLYSQLSY 175
Query: 175 LFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
LFEKV KP +SR S E +++ I Y +P+L
Sbjct: 176 LFEKVICAKPRSSRGTSLEAFIVCIGYTPRPGWNPKL 212
>gi|330805936|ref|XP_003290932.1| ribosomal RNA methyltransferase [Dictyostelium purpureum]
gi|325078930|gb|EGC32556.1| ribosomal RNA methyltransferase [Dictyostelium purpureum]
Length = 253
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 127/220 (57%), Gaps = 11/220 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+Q+D ++S V+DLCAAPG W QV
Sbjct: 1 MGK-SSKDKRDIYYRKAKEEGWRARSAFKLIQIDEEYSIFEDVKRVVDLCAAPGSWSQVL 59
Query: 61 VQRV------PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114
+R+ P +V +D+ +AP++G V ++ DITK E K+++ DL
Sbjct: 60 SRRIYGDGSDPNVKIV-AVDIQEMAPLKGVVQIKGDITKYET---AKQIISHFDGSLADL 115
Query: 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQ 174
++ DG+P+V G + Q+ L++ ++ + L P GTFV K+F+ D S + +K
Sbjct: 116 IISDGAPDVTGLHDIDFYGQSQLILSALNIVVHTLKPGGTFVAKMFKGDDMSLMFSQMKL 175
Query: 175 LFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDV 214
FE V KP +SR +S E ++L Y+ P +P+++D+
Sbjct: 176 FFEHVSFVKPKSSRDSSLENFVLCKNYQPPENYNPKIIDI 215
>gi|30679168|ref|NP_851026.1| S-adenosyl-L-methionine-dependent methyltransferase-like protein
[Arabidopsis thaliana]
gi|26983822|gb|AAN86163.1| putative cell division protein [Arabidopsis thaliana]
gi|332002931|gb|AED90314.1| S-adenosyl-L-methionine-dependent methyltransferase-like protein
[Arabidopsis thaliana]
Length = 309
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 128/225 (56%), Gaps = 22/225 (9%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK R D YYR AKE G+R+R+++KL+Q+D +F+ V+DLCAAPG W QV
Sbjct: 1 MGKASRDKR-DIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVL 59
Query: 61 VQRV--PVGS----------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEH- 107
+++ P S L++ +DL P+API G + ++ DIT AR +V+ H
Sbjct: 60 SRQLYLPAKSSAESKDGDLPLIVAIDLQPMAPIEGVIQVQGDITN----ARTAEVVIRHF 115
Query: 108 -GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYS 166
G +A DLV+ DG+P+V G + Q+ L++ + + T L G F+ K+FR +D +
Sbjct: 116 DGCKA-DLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHILKEGGKFIAKIFRGKD-T 173
Query: 167 SVLYC-LKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPR 210
S+LYC LK F V KP +SR++S E + + Y P +PR
Sbjct: 174 SLLYCQLKLFFPTVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPR 218
>gi|260944280|ref|XP_002616438.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238850087|gb|EEQ39551.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 301
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 123/216 (56%), Gaps = 9/216 (4%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+Q++ +F+ V+DLCAAPG W QV
Sbjct: 1 MGKAS-KDKRDLYYRRAKEEGWRARSAFKLLQINEQFNIFDGVRRVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVG-----SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV 115
+ + + ++ +DL P+API G ++ DIT P+ ++K+++ G D V
Sbjct: 60 SRELNKNGDKKEAKIVAVDLQPMAPIDGVTCIQADITHPK---TLQKILDLFGGEPADFV 116
Query: 116 LHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL 175
DG+P+V G + Q L++ +++L T L P GTFV K+FR +D + L L
Sbjct: 117 CSDGAPDVTGLHDLDEYIQAQLILSALQLTTCILKPGGTFVAKIFRGRDIDLLYSQLGYL 176
Query: 176 FEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
FE+V KP +SR S E +++ + Y +P+L
Sbjct: 177 FERVICAKPRSSRGTSLEAFIVCLGYSPRPGWNPKL 212
>gi|268575120|ref|XP_002642539.1| Hypothetical protein CBG20162 [Caenorhabditis briggsae]
Length = 331
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 127/215 (59%), Gaps = 9/215 (4%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK R D YYRLAKE+ +R+R+++KL+Q+D +F L+ +DLCAAPG W QV
Sbjct: 1 MGKTSRDKR-DIYYRLAKENKWRARSAFKLMQIDDEFQILKGVTRAVDLCAAPGSWSQVL 59
Query: 61 VQRV---PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117
+R+ + ++ +DL P+API G + L+ DIT E +V+E D+V+
Sbjct: 60 SKRLYEEDEKAKIVAIDLQPMAPIPGVIQLQGDITSVE---TANQVIEHFSGEKADIVIC 116
Query: 118 DGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYC-LKQLF 176
DG+P+V G + + Q L++ + + + L G F+ K+FRS++ SS+LY +K+ F
Sbjct: 117 DGAPDVTGIHSLDEFMQAELILAAFNITSHVLKNGGNFLAKIFRSRN-SSLLYAQMKRYF 175
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
++V + KP +SR +S E ++L + Y P P +
Sbjct: 176 KQVYLAKPRSSRQSSCEAFVLCLDYSPPEGFVPTM 210
>gi|297806107|ref|XP_002870937.1| hypothetical protein ARALYDRAFT_486954 [Arabidopsis lyrata subsp.
lyrata]
gi|297316774|gb|EFH47196.1| hypothetical protein ARALYDRAFT_486954 [Arabidopsis lyrata subsp.
lyrata]
Length = 309
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 128/225 (56%), Gaps = 22/225 (9%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK R D YYR AKE G+R+R+++KL+Q+D +F+ V+DLCAAPG W QV
Sbjct: 1 MGKASRDKR-DIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVL 59
Query: 61 VQRV--PVGS----------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEH- 107
+++ P S L++ +DL P+API G + ++ DIT AR +V+ H
Sbjct: 60 SRQLYLPAKSSAESKEGGLPLIVAIDLQPMAPIEGVIQVQGDITN----ARTAEVVIRHF 115
Query: 108 -GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYS 166
G +A DLV+ DG+P+V G + Q+ L++ + + T L G F+ K+FR +D +
Sbjct: 116 DGCKA-DLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHILKEGGKFIAKIFRGKD-T 173
Query: 167 SVLYC-LKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPR 210
S+LYC LK F V KP +SR++S E + + Y P +PR
Sbjct: 174 SLLYCQLKLFFPTVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPR 218
>gi|398364565|ref|NP_009617.3| Trm7p [Saccharomyces cerevisiae S288c]
gi|586500|sp|P38238.1|TRM7_YEAST RecName: Full=tRNA
(cytidine(32)/guanosine(34)-2'-O)-methyltransferase;
AltName: Full=tRNA (uridine-2'-O-)-methyltransferase
TRM7
gi|536303|emb|CAA85004.1| unnamed protein product [Saccharomyces cerevisiae]
gi|151946453|gb|EDN64675.1| 2'-O-ribose tRNA anticodon loop methyltransferase [Saccharomyces
cerevisiae YJM789]
gi|190408775|gb|EDV12040.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Saccharomyces
cerevisiae RM11-1a]
gi|207347732|gb|EDZ73814.1| YBR061Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271915|gb|EEU06940.1| Trm7p [Saccharomyces cerevisiae JAY291]
gi|285810396|tpg|DAA07181.1| TPA: Trm7p [Saccharomyces cerevisiae S288c]
gi|290878080|emb|CBK39139.1| Trm7p [Saccharomyces cerevisiae EC1118]
gi|323310224|gb|EGA63416.1| Trm7p [Saccharomyces cerevisiae FostersO]
gi|323334541|gb|EGA75915.1| Trm7p [Saccharomyces cerevisiae AWRI796]
gi|323338635|gb|EGA79851.1| Trm7p [Saccharomyces cerevisiae Vin13]
gi|323349695|gb|EGA83910.1| Trm7p [Saccharomyces cerevisiae Lalvin QA23]
gi|323356040|gb|EGA87845.1| Trm7p [Saccharomyces cerevisiae VL3]
gi|349576439|dbj|GAA21610.1| K7_Trm7p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392300898|gb|EIW11987.1| Trm7p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 310
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 128/235 (54%), Gaps = 17/235 (7%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHA--VLDLCAAPGGWMQ 58
MGK K + D YYR AKE GYR+R+++KL+QL+ +F FL + V+DLCAAPG W Q
Sbjct: 1 MGK-SSKDKRDLYYRKAKEQGYRARSAFKLLQLNDQFHFLDDPNLKRVVDLCAAPGSWSQ 59
Query: 59 VAVQRVPVGSL--------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVR 110
V +++ S ++ +DL P++PI +L+ DIT P+ AR+ K+ G
Sbjct: 60 VLSRKLFDESPSSDKEDRKIVSVDLQPMSPIPHVTTLQADITHPKTLARILKLF---GNE 116
Query: 111 AFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLY 170
D V DG+P+V G + Q L++ +++L L GTFV K+FR +D +
Sbjct: 117 KADFVCSDGAPDVTGLHDLDEYVQQQLIMSALQLTACILKKGGTFVAKIFRGRDIDMLYS 176
Query: 171 CLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL---LDVKYLFQGSV 222
L LF+K+ KP +SR S E +++ + Y P+ P+L V FQG
Sbjct: 177 QLGYLFDKIVCAKPRSSRGTSLEAFIVCLGYNPPSNWTPKLDVNTSVDEFFQGCF 231
>gi|296116233|ref|ZP_06834851.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Gluconacetobacter
hansenii ATCC 23769]
gi|295977339|gb|EFG84099.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Gluconacetobacter
hansenii ATCC 23769]
Length = 213
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 121/208 (58%), Gaps = 12/208 (5%)
Query: 2 GKVKGKHRL------DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGG 55
G+ +HR D Y + A++ G+RSRA++KL++LD +F +R V+DL AAPGG
Sbjct: 8 GRTTAQHRWLQRQLNDPYVQAAQKQGWRSRAAFKLIELDDRFHLIRPGMRVVDLGAAPGG 67
Query: 56 WMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV 115
W QVAV+R S V+G+DL+P+ P+ GA +E D P+ R++++++ A DLV
Sbjct: 68 WAQVAVKR--GASHVIGVDLLPVDPVPGATIIEGDFNDPDMPERLRELLDG----APDLV 121
Query: 116 LHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL 175
+ D +PN G + + L ++ ATQ LAP G+F+ KVF+ +L LK
Sbjct: 122 MSDMAPNTTGHAPTDHLRIIGLAELALDFATQILAPGGSFIAKVFQGGAEKQMLQALKHS 181
Query: 176 FEKVEVDKPAASRSASAEIYLLGIKYKA 203
F +V KP ASR S+E+Y++ ++
Sbjct: 182 FGQVRHAKPPASRKESSELYVIATDFRG 209
>gi|308161650|gb|EFO64088.1| FtsJ-like protein [Giardia lamblia P15]
Length = 268
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 120/196 (61%), Gaps = 4/196 (2%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
K + D YYRLAK+ G+R+R+++KL+QLD+++ R +DLCAAPG W QV ++P
Sbjct: 3 KDKRDIYYRLAKDEGWRARSAYKLLQLDAQYDLFRGVTRAVDLCAAPGSWSQVLSHKLPA 62
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
++++ +DL P+AP+ ++ DIT+ E ++ ++ HG LV+ DG+P+V G
Sbjct: 63 DAVIISVDLAPMAPLPRVTQIQGDITRKEVADKITELC--HG-EMCQLVVCDGAPDVTGV 119
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVL-YCLKQLFEKVEVDKPA 185
+ Q LV ++ LA Q LAP GTFV+KVFR + S+L F+ V++ KP
Sbjct: 120 HDLDEYVQAGLVDHAMALARQILAPDGTFVSKVFRGECLESLLRRNALSFFKNVDISKPD 179
Query: 186 ASRSASAEIYLLGIKY 201
ASR++S E +++ Y
Sbjct: 180 ASRASSMECFMVCRGY 195
>gi|395831828|ref|XP_003788990.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like
[Otolemur garnettii]
Length = 308
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 124/214 (57%), Gaps = 7/214 (3%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE+G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 1 MGRTS-KDKRDVYYRLAKENGWRARSAFKLLQLDEQFQLFQGVTRAVDLCAAPGSWSQVL 59
Query: 61 VQRV---PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117
Q++ G +V+ +DL +API G V ++ DIT+ + K++++ DLV+
Sbjct: 60 SQKIGGQGCGHVVVAVDLQAMAPIPGVVQIQGDITQ---LSTAKEIIQHFEGCPADLVVC 116
Query: 118 DGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFE 177
DG+P+V G + Q L++ ++ +AT L P G FV K+FR +D + + L+ F
Sbjct: 117 DGAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLRVFFS 176
Query: 178 KVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
V KP +SR++S E + + Y PA P L
Sbjct: 177 SVLCAKPRSSRNSSIEAFAVCQSYDPPAGFTPDL 210
>gi|159119934|ref|XP_001710185.1| FtsJ-like protein [Giardia lamblia ATCC 50803]
gi|157438303|gb|EDO82511.1| FtsJ-like protein [Giardia lamblia ATCC 50803]
Length = 268
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 119/196 (60%), Gaps = 4/196 (2%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
K + D YYRLAK+ G+R+R+++KL+QLD ++ R +DLCAAPG W QV ++P
Sbjct: 3 KDKRDIYYRLAKDEGWRARSAYKLLQLDEQYDLFRGVTRAVDLCAAPGSWSQVLSHKLPA 62
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
++++ +DL P+AP+ ++ DIT+ E ++ ++ HG LV+ DG+P+V G
Sbjct: 63 DAIIISVDLAPMAPLPRVTQIQGDITRKEVADKIIELC--HG-EMCQLVVCDGAPDVTGV 119
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVL-YCLKQLFEKVEVDKPA 185
+ Q LV ++ LA Q LAP GTFV+KVFR + S+L F+ V++ KP
Sbjct: 120 HDLDEYVQAGLVDHAMTLARQILAPGGTFVSKVFRGECLESLLRRNALSFFKTVDISKPD 179
Query: 186 ASRSASAEIYLLGIKY 201
ASR++S E +++ Y
Sbjct: 180 ASRASSMECFMVCADY 195
>gi|344301534|gb|EGW31846.1| hypothetical protein SPAPADRAFT_140790 [Spathaspora passalidarum
NRRL Y-27907]
Length = 295
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 121/212 (57%), Gaps = 5/212 (2%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+QL+ +F+ V+DLCAAPG W QV
Sbjct: 1 MGK-SSKDKRDLYYRRAKEEGWRARSAFKLLQLNQEFNLFDGITRVVDLCAAPGSWSQVL 59
Query: 61 VQRVPV-GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDG 119
+ + + ++ +DL P+ PI G +++ DIT P ++ +++ D V DG
Sbjct: 60 SRELQGKNAKIVAVDLQPMTPIDGVTTIQADITHPN---TLQTILDIFAGEQADFVCSDG 116
Query: 120 SPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKV 179
+P+V G + Q L++ +++L T L P GTFV K+FR +D + L LFE+V
Sbjct: 117 APDVTGLHDLDEYIQAQLILSALQLTTCLLKPGGTFVAKIFRGRDIDLLYSQLSYLFERV 176
Query: 180 EVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
KP ASR S E +++ + YK +P+L
Sbjct: 177 ICAKPRASRGTSLEAFIVCLGYKPRPGWNPKL 208
>gi|19115658|ref|NP_594746.1| tRNA 2'-O-ribose methyltransferase (predicted) [Schizosaccharomyces
pombe 972h-]
gi|9910977|sp|O36015.1|YEK3_SCHPO RecName: Full=Putative ribosomal RNA methyltransferase C4F10.03c;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|2656003|emb|CAB11724.1| tRNA 2'-O-ribose methyltransferase (predicted) [Schizosaccharomyces
pombe]
Length = 285
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 123/221 (55%), Gaps = 14/221 (6%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE G+R+R+++KL+QL+ +F+ + V+DLCAAPG W QV
Sbjct: 1 MGR-SSKDKRDAYYRLAKEQGWRARSAFKLLQLNEQFNLFEGAKRVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVG----------SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVR 110
+ + +++ +DL P+API G +L+ DIT P + ++ G
Sbjct: 60 SRELLKNIDTSIAADEKPMIVAVDLQPMAPIDGVCTLQLDITHPN---TLSIILSHFGNE 116
Query: 111 AFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLY 170
DLV+ DG+P+V G + Q +++ + LA L P G FV K+FR +D S +
Sbjct: 117 PADLVVSDGAPDVTGLHDLDEYIQAQILLAAFNLAVCVLKPGGKFVAKIFRGRDVSLLYS 176
Query: 171 CLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
L+ +F KV KP +SR++S E +++ + P+ P L
Sbjct: 177 QLRLMFRKVSCAKPRSSRASSIESFVVCEDFNPPSNFQPDL 217
>gi|73670706|ref|YP_306721.1| 23S RNA methyltransferase J [Methanosarcina barkeri str. Fusaro]
gi|121722047|sp|Q466Q1.1|RLME_METBF RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|72397868|gb|AAZ72141.1| 23S rRNA Um-2552 2'-O-methyltransferase [Methanosarcina barkeri
str. Fusaro]
Length = 263
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 125/211 (59%), Gaps = 7/211 (3%)
Query: 9 RLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGS 68
R D YYR AKE GYRSRAS+KL Q++ + + +V+DL AAPGGW+QVA + G
Sbjct: 5 RRDYYYRQAKEEGYRSRASFKLKQINERHHIINRGDSVVDLGAAPGGWLQVAKELS--GG 62
Query: 69 LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWA 128
VLG+DL I PI G +++ +I + ++K+++ G + D+VL D +PN+ G W+
Sbjct: 63 KVLGVDLQRIVPIEGVETIQGNIN---ADSTIQKIIKTVGAKGADVVLCDAAPNLSGNWS 119
Query: 129 QEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASR 188
+ L +++ A + L PKG FV KVF+ ++ + ++ F + P ASR
Sbjct: 120 YDHARSIELATSALECAKKILKPKGNFVVKVFQGDMFNDYMQKVRDNFVRTMAYSPKASR 179
Query: 189 SASAEIYLLGIKY-KAPA-KIDPRLLDVKYL 217
S SAEIY++G K+ AP K D ++D++ L
Sbjct: 180 SQSAEIYVIGKKFLTAPLRKGDKFVVDIEKL 210
>gi|116784269|gb|ABK23279.1| unknown [Picea sitchensis]
Length = 344
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 130/227 (57%), Gaps = 22/227 (9%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+Q+D +F+ V+DLCAAPG W QV
Sbjct: 1 MGKAS-KDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGS------------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEH- 107
+++ + + L++ +DL P+A I G + ++ DIT AR +V+ +H
Sbjct: 60 SRKLYLPAKAAAQSRDEELPLIVAIDLQPMASIEGVIQVQGDITS----ARTAEVVIKHF 115
Query: 108 -GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYS 166
G +A DLV+ DG+P+V G + Q+ L++ ++ + T L G F+ K+FR +D +
Sbjct: 116 DGCKA-DLVVCDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLRVGGKFIAKIFRGKD-T 173
Query: 167 SVLYC-LKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLL 212
S+LYC LK F V KP +SR++S E + + Y P DP L
Sbjct: 174 SLLYCQLKMFFSTVTFAKPKSSRNSSIEAFAVCENYNPPEGFDPNNL 220
>gi|145354873|ref|XP_001421699.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581937|gb|ABO99992.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 645
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/202 (46%), Positives = 125/202 (61%), Gaps = 18/202 (8%)
Query: 606 GDFEIVPAPGADSSDDSSSD------ESEDEEV--DTKAEILACAKKMLRKKQREQILDD 657
GDFE+V A A+ DS SD +SE +E+ DT+A ILA KKM+RKK RE++++D
Sbjct: 420 GDFEVVTAE-AEPPTDSDSDAEGYGYDSEVDELSDDTRARILALGKKMIRKKDREELIED 478
Query: 658 AYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARK 717
AYNRY FDDD +PDWF E+ERR + I T E+A KAQ ++ RP KKVAEAK RK
Sbjct: 479 AYNRYAFDDDDVPDWFAEDERRFMKPIPQYTAAELAEAKAQLAAVNTRPIKKVAEAKWRK 538
Query: 718 KRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLY------KSAVPKRPKKEYVVAKK 771
K+ A K+ + R +A+ I +Q D+ D SK K+IE+++ S K+P+K VVA+K
Sbjct: 539 KKRAEAKISQARVRASAIIEQDDVPDVSKAKEIERVFAKARRATSGAIKKPRK-VVVARK 597
Query: 772 GVQVRAGKGKVLVDPRMKKDSR 793
R G VD R D+R
Sbjct: 598 --YHRGNAGGPSVDKRQLADAR 617
>gi|323306102|gb|EGA59836.1| Trm7p [Saccharomyces cerevisiae FostersB]
Length = 233
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 128/235 (54%), Gaps = 17/235 (7%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHA--VLDLCAAPGGWMQ 58
MGK K + D YYR AKE GYR+R+++KL+QL+ +F FL + V+DLCAAPG W Q
Sbjct: 1 MGK-SSKDKRDLYYRKAKEQGYRARSAFKLLQLNDQFHFLDDPNLKRVVDLCAAPGSWSQ 59
Query: 59 VAVQRVPVGSL--------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVR 110
V +++ S ++ +DL P++PI +L+ DIT P+ AR+ K+ G
Sbjct: 60 VLSRKLFDESPSSDKEDRKIVSVDLQPMSPIPHVTTLQADITHPKTLARILKLF---GNE 116
Query: 111 AFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLY 170
D V DG+P+V G + Q L++ +++L L GTFV K+FR +D +
Sbjct: 117 KADFVCSDGAPDVTGLHDLDEYVQQQLIMSALQLTACILKKGGTFVAKIFRGRDIDMLYS 176
Query: 171 CLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL---LDVKYLFQGSV 222
L LF+K+ KP +SR S E +++ + Y P+ P+L V FQG
Sbjct: 177 QLGYLFDKIVCAKPRSSRGTSLEAFIVCLGYNPPSNWTPKLDVNTSVDEFFQGCF 231
>gi|255581073|ref|XP_002531352.1| ribosomal RNA methyltransferase, putative [Ricinus communis]
gi|223529050|gb|EEF31036.1| ribosomal RNA methyltransferase, putative [Ricinus communis]
Length = 316
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 128/225 (56%), Gaps = 22/225 (9%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK R D YYR AKE G+R+R+++KL+Q+D +F+ V+DLCAAPG W QV
Sbjct: 1 MGKASRDKR-DIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGS------------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEH- 107
+++ + + L++ +DL P+API G + ++ DIT AR +V+ H
Sbjct: 60 SRKLYLPAKLTQDSRDDNLPLIVAIDLQPMAPIEGVIQVQGDITN----ARTAEVVIRHF 115
Query: 108 -GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYS 166
G +A DLV+ DG+P+V G + Q+ L++ + + T L G F+ K+FR +D +
Sbjct: 116 DGCKA-DLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHILREGGKFIAKIFRGKD-T 173
Query: 167 SVLYC-LKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPR 210
S+LYC LK F V KP +SR++S E + + Y P +P+
Sbjct: 174 SLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPK 218
>gi|156836549|ref|XP_001642330.1| hypothetical protein Kpol_251p2 [Vanderwaltozyma polyspora DSM
70294]
gi|156112834|gb|EDO14472.1| hypothetical protein Kpol_251p2 [Vanderwaltozyma polyspora DSM
70294]
Length = 313
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 123/222 (55%), Gaps = 15/222 (6%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHA--VLDLCAAPGGWMQ 58
MGK K + D YYR AKE GYR+R+++KL+QL+ +F FL + V+DLCAAPG W Q
Sbjct: 1 MGK-SSKDKRDLYYRKAKEQGYRARSAFKLLQLNEQFHFLDDPNLKRVVDLCAAPGSWSQ 59
Query: 59 VAVQRVPV---------GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGV 109
V +++ ++ +DL P++PI ++L+ DIT P+ A K++E G
Sbjct: 60 VLSRKLFTEDPDKENTKDKKIIAVDLQPMSPIDNVITLQADITHPKTLA---KILELFGN 116
Query: 110 RAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVL 169
D V DG+P+V G + Q L++ +++L T L GTF+ K+FR +D +
Sbjct: 117 EKADFVCSDGAPDVTGLHDLDEYVQQQLIMSALQLTTCILKTGGTFIAKIFRGRDIDLLY 176
Query: 170 YCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
L LF++V KP +SR S E +++ + Y P P L
Sbjct: 177 SQLGFLFKRVICAKPRSSRGTSLEAFIVCMDYSPPKNWFPEL 218
>gi|21593533|gb|AAM65500.1| cell division-like protein [Arabidopsis thaliana]
Length = 308
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 127/224 (56%), Gaps = 21/224 (9%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK R D YYR AKE G+R+R+++KL+Q+D +F+ V+DLCAAPG W QV
Sbjct: 1 MGKASRDKR-DIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVL 59
Query: 61 VQRV--PVGS----------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEH- 107
+++ P S L++ +DL P+API G + ++ DIT AR + V+
Sbjct: 60 SRQLYLPAKSSAESKDGDLPLIVAIDLQPMAPIEGVIQVQGDITN----ARTEVVIRHFD 115
Query: 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSS 167
G +A DLV+ DG+P+V G + Q+ L++ + + T L G F+ K+FR +D +S
Sbjct: 116 GCKA-DLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHILKEGGKFIAKIFRGKD-TS 173
Query: 168 VLYC-LKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPR 210
+LYC LK F V KP +SR++S E + + Y P +PR
Sbjct: 174 LLYCQLKLFFPTVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPR 217
>gi|330994695|ref|ZP_08318618.1| Ribosomal RNA large subunit methyltransferase E [Gluconacetobacter
sp. SXCC-1]
gi|329758336|gb|EGG74857.1| Ribosomal RNA large subunit methyltransferase E [Gluconacetobacter
sp. SXCC-1]
Length = 254
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 121/208 (58%), Gaps = 12/208 (5%)
Query: 2 GKVKGKHRL------DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGG 55
G+ +HR D Y + A++ G+RSRA++KL++LD +F +R V+DL AAPGG
Sbjct: 47 GRTTAQHRWLQRQLNDPYVQAAQKQGWRSRAAFKLIELDDRFHLIRPGTRVVDLGAAPGG 106
Query: 56 WMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV 115
W QVAV+R + V+G+DL+P+ P+ GA +E D P+ R+ ++ G RA DLV
Sbjct: 107 WTQVAVKR--GAAEVVGVDLLPVDPVPGATVIEGDFNDPDMPDRLTGLL---GGRA-DLV 160
Query: 116 LHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL 175
+ D +PN G + + L ++ AT+ LAP G FV KVF+ +L LK+L
Sbjct: 161 MSDMAPNTTGHAPTDHLRIIGLAELALHFATRILAPDGAFVAKVFQGGSEKQMLADLKRL 220
Query: 176 FEKVEVDKPAASRSASAEIYLLGIKYKA 203
F +V KP ASR S+E+Y++ ++
Sbjct: 221 FTQVRHAKPPASRKESSELYVVATGFRG 248
>gi|242066866|ref|XP_002454722.1| hypothetical protein SORBIDRAFT_04g036220 [Sorghum bicolor]
gi|241934553|gb|EES07698.1| hypothetical protein SORBIDRAFT_04g036220 [Sorghum bicolor]
Length = 317
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 127/219 (57%), Gaps = 22/219 (10%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+Q+D +F+ V+DLCAAPG W QV
Sbjct: 1 MGKAS-KDKRDIYYRKAKEEGWRARSAFKLLQIDQEFNIFHGVKRVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGS------------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEH- 107
+ + V + L++ +DL P+API G + ++ DIT AR +V+ H
Sbjct: 60 SRNLYVPAKQSPDCKEGDLPLIVAIDLQPMAPIEGVIQVQGDITN----ARTAEVVIRHF 115
Query: 108 -GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYS 166
G +A DLV+ DG+P+V G + Q+ L++ ++ + T L G FV K+FR +D +
Sbjct: 116 DGCKA-DLVVCDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLKVGGKFVAKIFRGKD-T 173
Query: 167 SVLYC-LKQLFEKVEVDKPAASRSASAEIYLLGIKYKAP 204
S+LYC LK F +V KP +SR++S E + + Y P
Sbjct: 174 SLLYCQLKLFFSQVTFAKPKSSRNSSIEAFAVCENYSPP 212
>gi|146419553|ref|XP_001485738.1| hypothetical protein PGUG_01409 [Meyerozyma guilliermondii ATCC
6260]
Length = 293
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 124/225 (55%), Gaps = 10/225 (4%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+QLD +F V+DLCAAPG W QV
Sbjct: 1 MGK-SSKDKRDLYYRRAKEEGWRARSAFKLLQLDEEFGLFSGVKRVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVG-----SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV 115
+ + + ++ +DL P+ PI G ++L+ DIT P+ ++++++ G D V
Sbjct: 60 SREIYKNLKGEDAKIVAVDLQPMTPIDGVITLQADITHPK---TLQRILDIFGGEPADFV 116
Query: 116 LHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL 175
DG+P+V G + Q LV+ +++L T L GTFV K+FR +D + L L
Sbjct: 117 CSDGAPDVTGLHDLDEYIQAQLVLCALQLTTCVLKEGGTFVAKIFRGRDIDLLYSQLGHL 176
Query: 176 FEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL-LDVKYLFQ 219
FE+V KP A R S E +++ I YK P + L + FQ
Sbjct: 177 FERVVCAKPRALRGTSLEAFIVCIGYKPRPGWTPNIALSTEEFFQ 221
>gi|345560214|gb|EGX43339.1| hypothetical protein AOL_s00215g75 [Arthrobotrys oligospora ATCC
24927]
Length = 326
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/237 (38%), Positives = 127/237 (53%), Gaps = 30/237 (12%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYRLAKE GYR+R+++KL+QLD++F+ + V+DLCAAPG W QV
Sbjct: 1 MGK-SSKDKRDSYYRLAKEQGYRARSAYKLLQLDAQFNLFKDVTRVVDLCAAPGSWSQVL 59
Query: 61 -------------------------VQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPE 95
VQ P +V LDL P+ P+ G ++L+ DIT P
Sbjct: 60 SRSLVAKGKDREPNVAQSETNEVQEVQSKPKVKIV-ALDLQPMTPLPGVITLQADITHPS 118
Query: 96 CRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTF 155
V K +E DLV+ DG+P+V G + Q L++ ++ LAT L P G F
Sbjct: 119 TLPLVLKHLESDSANV-DLVVSDGAPDVTGLHDLDEYIQAQLLLAALNLATCVLRPSGNF 177
Query: 156 VTKVFRSQDYSSVLYC-LKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
V K+FR +D + LYC L+ FE+V V KP +SR +S E +++ Y P P L
Sbjct: 178 VAKIFRGRDVAE-LYCKLRIFFERVTVAKPRSSRGSSIEAFVVCENYTPPEGFQPSL 233
>gi|327400140|ref|YP_004340979.1| ribosomal RNA large subunit methyltransferase E [Archaeoglobus
veneficus SNP6]
gi|327315648|gb|AEA46264.1| Ribosomal RNA large subunit methyltransferase E [Archaeoglobus
veneficus SNP6]
Length = 209
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 112/194 (57%), Gaps = 8/194 (4%)
Query: 9 RLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGS 68
R D YY AK+ GYRSRA++KL+Q++ F ++ VLDL A+PGGW QVAV+ +G+
Sbjct: 10 RQDYYYWEAKKKGYRSRAAFKLLQMNKTFKLIKKGSKVLDLGASPGGWSQVAVE---LGA 66
Query: 69 LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWA 128
V+ +D+ P+ PI G ++ DITK E ++K V E +D V+ D SP + G W+
Sbjct: 67 EVVAVDINPMPPIEGVTFIQGDITKEETLEKIKAVSRE-----YDAVICDASPKITGHWS 121
Query: 129 QEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASR 188
+ + L + +A Q L P G FV K+F+ ++ V K F ++ P ASR
Sbjct: 122 IDHLISMDLARAAFNIARQVLKPGGNFVVKMFQGEEIQKVFNEFKPYFRFKKLHSPPASR 181
Query: 189 SASAEIYLLGIKYK 202
SAEIY +G ++K
Sbjct: 182 KRSAEIYFIGKRFK 195
>gi|401626878|gb|EJS44796.1| trm7p [Saccharomyces arboricola H-6]
Length = 310
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 131/245 (53%), Gaps = 25/245 (10%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHA--VLDLCAAPGGWMQ 58
MGK K + D YYR AKE GYR+R+++KL+QL+ +F FL + V+DLCAAPG W Q
Sbjct: 1 MGK-SSKDKRDLYYRKAKEQGYRARSAFKLLQLNEQFHFLDDPNLKRVVDLCAAPGSWSQ 59
Query: 59 VAVQRVPVGSL--------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVR 110
V +++ S ++ +DL P++PI SL+ DIT P+ AR+ K+ G
Sbjct: 60 VLSRKLFSDSASTESDDRKIVAVDLQPMSPIPHVTSLQADITHPKTLARILKLF---GNE 116
Query: 111 AFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQD----YS 166
D V DG+P+V G + Q L++ +++L L G FV K+FR +D YS
Sbjct: 117 KADFVCSDGAPDVTGLHDLDEYVQQQLIMSALQLTACVLKKGGIFVAKIFRGRDIDMLYS 176
Query: 167 SVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL---LDVKYLFQGSVE 223
V Y LF+++ KP +SR S E +++ + Y P+ P+L V FQG
Sbjct: 177 QVGY----LFDRIVCAKPRSSRGTSLEAFIVCLGYNPPSSWTPKLDVNTSVDEFFQGCSL 232
Query: 224 PRKVV 228
R +
Sbjct: 233 NRLCI 237
>gi|363749941|ref|XP_003645188.1| hypothetical protein Ecym_2660 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888821|gb|AET38371.1| Hypothetical protein Ecym_2660 [Eremothecium cymbalariae
DBVPG#7215]
Length = 302
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 119/217 (54%), Gaps = 10/217 (4%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+QLD +F FL + V+DLCAAPG W QV
Sbjct: 1 MGK-SSKDKRDLYYRKAKEQGFRARSAFKLLQLDDEFHFLDNVDRVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGS------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114
+R+ + ++ +DL P++PI V+L+ DIT P + K+ME D
Sbjct: 60 SRRLFIDGEENCDKKIVAVDLQPMSPIDHVVTLQADITHPR---TLGKIMELFKGEKADF 116
Query: 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQ 174
V DG+P+V G + Q L++ +++L T L G FV K+FR +D + L
Sbjct: 117 VCSDGAPDVTGLHDLDEYVQQQLILSALQLTTCLLRKGGCFVAKIFRGRDIDMLYSQLGY 176
Query: 175 LFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
LF KV KP +SR S E +++ Y P P L
Sbjct: 177 LFNKVICAKPRSSRGTSLESFIVCQDYNPPDGWLPNL 213
>gi|115469828|ref|NP_001058513.1| Os06g0704900 [Oryza sativa Japonica Group]
gi|53792764|dbj|BAD53799.1| putative FtsJ homolog 1 isoform b [Oryza sativa Japonica Group]
gi|113596553|dbj|BAF20427.1| Os06g0704900 [Oryza sativa Japonica Group]
gi|215736929|dbj|BAG95858.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218198852|gb|EEC81279.1| hypothetical protein OsI_24387 [Oryza sativa Indica Group]
gi|222636192|gb|EEE66324.1| hypothetical protein OsJ_22564 [Oryza sativa Japonica Group]
Length = 317
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 127/219 (57%), Gaps = 22/219 (10%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+Q+D +F+ V+DLCAAPG W QV
Sbjct: 1 MGKAS-KDKRDIYYRKAKEEGWRARSAFKLLQIDQEFNIFHGVKRVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGS------------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEH- 107
+ + V + L++ +DL P+API G + ++ DIT AR +V+ H
Sbjct: 60 SRNLYVPAKQSPDCKEGDLPLIVAIDLQPMAPIEGVIQVQGDIT----NARTAEVVIRHF 115
Query: 108 -GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYS 166
G +A DLV+ DG+P+V G + Q+ L++ ++ + T L G FV K+FR +D +
Sbjct: 116 DGCKA-DLVVCDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLKVGGKFVAKIFRGKD-T 173
Query: 167 SVLYC-LKQLFEKVEVDKPAASRSASAEIYLLGIKYKAP 204
S+LYC LK F +V KP +SR++S E + + Y P
Sbjct: 174 SLLYCQLKLFFSQVTFAKPKSSRNSSIEAFAVCENYSPP 212
>gi|349700055|ref|ZP_08901684.1| ribosomal RNA large subunit 23S methyltransferase RrmJ
[Gluconacetobacter europaeus LMG 18494]
Length = 254
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 122/208 (58%), Gaps = 12/208 (5%)
Query: 2 GKVKGKHRL------DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGG 55
G+ +HR D Y + A++ G+RSRA++KL++LD +F +R V+DL AAPGG
Sbjct: 47 GRTTAQHRWLQRQLNDPYVQAAQKQGWRSRAAFKLIELDDRFHMIRPGARVVDLGAAPGG 106
Query: 56 WMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV 115
W QVAV+R + V+G+DL+P+ P+ GA +E D P+ R+ ++ G RA D+V
Sbjct: 107 WTQVAVKR--GAAEVVGVDLLPVDPVPGATIIEGDFNDPDMPDRLTGLL---GGRA-DVV 160
Query: 116 LHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL 175
+ D +PN G + + L ++ AT+ LAP GTFV KVF+ +L LK++
Sbjct: 161 MSDMAPNTTGHAPTDHLRIIGLAELALDFATRILAPDGTFVAKVFQGGSEKQMLADLKRM 220
Query: 176 FEKVEVDKPAASRSASAEIYLLGIKYKA 203
F +V KP ASR S+E+Y++ ++
Sbjct: 221 FTQVRHAKPPASRKESSELYVVATGFRG 248
>gi|17554650|ref|NP_497843.1| Protein R74.7 [Caenorhabditis elegans]
gi|9910861|sp|Q22031.3|RRMJ1_CAEEL RecName: Full=Putative ribosomal RNA methyltransferase R74.7;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|5824584|emb|CAA85279.2| Protein R74.7 [Caenorhabditis elegans]
Length = 337
Score = 139 bits (350), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 127/215 (59%), Gaps = 9/215 (4%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK R D YYRLAKE+ +R+R+++KL+Q+D +F L+ +DLCAAPG W QV
Sbjct: 1 MGKTSRDKR-DIYYRLAKENKWRARSAFKLMQIDDEFQILKGVRRAVDLCAAPGSWSQVL 59
Query: 61 VQRV---PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117
+R+ + ++ +DL P+API G + L+ DIT + +V++ D+V+
Sbjct: 60 SKRLYEEDQEAKIVAIDLQPMAPIPGVIQLQGDITSVD---TANQVIKHFSGEKSDIVIC 116
Query: 118 DGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYC-LKQLF 176
DG+P+V G + + Q L++ + + + L G F+ K+FRS++ SS+LY +K+ F
Sbjct: 117 DGAPDVTGIHSLDEFMQAELILAAFNITSHVLKEGGNFLAKIFRSRN-SSLLYAQMKKYF 175
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
+KV + KP +SR +S E ++L + Y P P +
Sbjct: 176 KKVYLAKPRSSRQSSCEAFVLCLDYSPPEGFVPTM 210
>gi|405971894|gb|EKC36697.1| Putative ribosomal RNA methyltransferase 1 [Crassostrea gigas]
Length = 348
Score = 139 bits (350), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/226 (35%), Positives = 128/226 (56%), Gaps = 14/226 (6%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYRLAKE G+R+R+++KL+Q++ F+ V+DLCAAPG W QV
Sbjct: 1 MGK-SSKDKRDVYYRLAKEEGWRARSAFKLLQINEDFNLFEGVKKVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGSL------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114
+++ G + ++ +DL +API G + L+ DITK ++ ++++ DL
Sbjct: 60 ARKLRGGDVKNDDVKIVAVDLQAMAPIPGVIQLQGDITK---KSTAQEIISHFEGEKADL 116
Query: 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQ 174
V+ DG+P+V G + Q L++ ++ + T L GTFV K+FR +D + + L+
Sbjct: 117 VVCDGAPDVTGLHDIDEYIQAQLLLAALNITTHVLRTGGTFVAKIFRGKDVTLLYSQLRI 176
Query: 175 LFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPR----LLDVKY 216
F V + KP +SR++S E +++ Y PA P LLD KY
Sbjct: 177 FFPLVAIFKPRSSRNSSIEAFVVCQNYSPPAGYIPNMSNPLLDHKY 222
>gi|255083873|ref|XP_002508511.1| predicted protein [Micromonas sp. RCC299]
gi|226523788|gb|ACO69769.1| predicted protein [Micromonas sp. RCC299]
Length = 327
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 128/221 (57%), Gaps = 16/221 (7%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+Q+D F L++ V+DLCAAPG W QV
Sbjct: 1 MGKAS-KDKRDIYYRKAKEEGWRARSAFKLLQIDDSFDILKNVKNVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGS-----------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHG- 108
+R+ + + ++ +DL P+API G +++ D+T A+V++++
Sbjct: 60 SRRIYLPAKEKGLPDEDMPKLIAIDLQPMAPIEGITTIQGDMTS---MAKVEEILAHFTD 116
Query: 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSV 168
R DLV+ DG+P+V G + Q L++ + + T LA GT+V K+FR +D + +
Sbjct: 117 GRKADLVISDGAPDVTGLHDMDEFMQAQLILAGLTVCTHILADGGTYVAKIFRGKDCALL 176
Query: 169 LYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDP 209
LK F++V KP +SR++S E +++ +Y P +P
Sbjct: 177 YSQLKLFFKQVTCAKPKSSRNSSIEAFVVCQEYSPPEGFEP 217
>gi|291222138|ref|XP_002731075.1| PREDICTED: FtsJ homolog 1-like [Saccoglossus kowalevskii]
Length = 361
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 127/225 (56%), Gaps = 13/225 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE G+R+R+++KL+Q++ +F+ + V+DLCAAPG W QV
Sbjct: 1 MGR-SSKDKRDIYYRLAKEEGWRARSAFKLLQINEEFNIFKDVSKVVDLCAAPGSWSQVL 59
Query: 61 VQRV-----PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV 115
+R+ ++ +DL +AP+ G + ++ DITK + E G +A DLV
Sbjct: 60 SRRLRGQDREADPKIVAVDLQAMAPLPGVIQIQGDITKVSTAMEIIGHFE--GEQA-DLV 116
Query: 116 LHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL 175
+ DG+P+V G + Q L++ ++ + T L P GTFV K+FR +D + + LK
Sbjct: 117 VCDGAPDVTGLHDLDEYIQAQLLLAALNITTHVLKPGGTFVAKIFRGKDVTLLYSQLKIF 176
Query: 176 FEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPR----LLDVKY 216
F KV + KP +SR++S E +++ Y P P LLD Y
Sbjct: 177 FPKVTIAKPRSSRNSSIEAFVVCENYSPPVGYKPNMSNPLLDHHY 221
>gi|226500760|ref|NP_001152207.1| ribosomal RNA methyltransferase 1 [Zea mays]
gi|195653845|gb|ACG46390.1| ribosomal RNA methyltransferase 1 [Zea mays]
gi|224035109|gb|ACN36630.1| unknown [Zea mays]
gi|413939353|gb|AFW73904.1| Ribosomal RNA methyltransferase 1 [Zea mays]
Length = 318
Score = 139 bits (349), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 126/219 (57%), Gaps = 22/219 (10%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+Q+D +F+ V+DLCAAPG W QV
Sbjct: 1 MGKAS-KDKRDIYYRKAKEEGWRARSAFKLLQIDQEFNIFHGVKHVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGS------------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEH- 107
+ + V + L++ +DL P+API G + ++ DIT AR V+ H
Sbjct: 60 SRNLYVPAKQSSDCKEGDLPLIVAIDLQPMAPIEGVIQVQGDIT----NARTADVVIRHF 115
Query: 108 -GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYS 166
G +A DLV+ DG+P+V G + Q+ L++ ++ + T L G FV K+FR +D +
Sbjct: 116 DGCKA-DLVVCDGAPDVTGLHDMDEFVQSQLILAALAIVTHVLKVGGKFVAKIFRGKD-T 173
Query: 167 SVLYC-LKQLFEKVEVDKPAASRSASAEIYLLGIKYKAP 204
S+LYC LK F +V KP +SR++S E + + Y P
Sbjct: 174 SLLYCQLKLFFSQVTFAKPKSSRNSSIEAFAVCENYSPP 212
>gi|222423600|dbj|BAH19769.1| AT5G01230 [Arabidopsis thaliana]
Length = 309
Score = 139 bits (349), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 127/225 (56%), Gaps = 22/225 (9%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK R D YYR AKE G+R+R+++KL+Q+D +F+ V+DLCAAPG W QV
Sbjct: 1 MGKASRDKR-DIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVL 59
Query: 61 VQR--VPVGS----------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEH- 107
++ +P S L++ +DL P+API G + ++ DIT AR +V+ H
Sbjct: 60 SRQLYLPAKSSAESKDGDLPLIVAIDLQPMAPIEGVIQVQGDITN----ARTAEVVIRHF 115
Query: 108 -GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYS 166
G +A DLV+ D +P+V G + Q+ L++ + + T L G F+ K+FR +D +
Sbjct: 116 DGCKA-DLVVCDDAPDVTGLHDMDEFVQSQLILAGLTIVTHILKEGGKFIAKIFRGKD-T 173
Query: 167 SVLYC-LKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPR 210
S+LYC LK F V KP +SR++S E + + Y P +PR
Sbjct: 174 SLLYCQLKLFFPTVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPR 218
>gi|253742114|gb|EES98965.1| FtsJ-like protein [Giardia intestinalis ATCC 50581]
Length = 268
Score = 139 bits (349), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 120/196 (61%), Gaps = 4/196 (2%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
K + D YYRLAK+ G+R+R+++KL+QLD+++ +DLCAAPG W QV +++P
Sbjct: 3 KDKRDIYYRLAKDEGWRARSAYKLLQLDAQYDLFSGVTRAVDLCAAPGSWSQVLSRKLPD 62
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
++++ +DL P+AP+ + ++ DIT+ E K++E LV+ DG+P+V G
Sbjct: 63 DAIIISVDLAPMAPLPRVIQIQGDITRKE---VADKIIELCRGEMCQLVVCDGAPDVTGV 119
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVL-YCLKQLFEKVEVDKPA 185
+ Q LV ++ LA + LAP GTFV+KVFR + S+L F+ V+V KP
Sbjct: 120 HDLDEYVQAGLVDHAMTLARRILAPGGTFVSKVFRGECLESLLRRNALSFFKHVDVSKPD 179
Query: 186 ASRSASAEIYLLGIKY 201
ASR++S E +L+ +Y
Sbjct: 180 ASRASSMECFLVCTEY 195
>gi|366996813|ref|XP_003678169.1| hypothetical protein NCAS_0I01590 [Naumovozyma castellii CBS 4309]
gi|342304040|emb|CCC71827.1| hypothetical protein NCAS_0I01590 [Naumovozyma castellii CBS 4309]
Length = 309
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 120/215 (55%), Gaps = 14/215 (6%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHA--VLDLCAAPGGWMQ 58
MGK K + D YYR AKE G+R+R+++KL+QL+ F FL + V+DLCAAPG W Q
Sbjct: 1 MGK-NSKDKRDMYYRKAKEQGFRARSAFKLLQLNDDFHFLDDPNLKRVVDLCAAPGSWSQ 59
Query: 59 VAVQRVPVGSL--------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVR 110
V Q++ G ++ +DL P++PI +L+ DIT P+ +K++++ G
Sbjct: 60 VLSQKLFDGKTAEEIKDRKIVAVDLQPMSPINHVTTLQADITHPK---TLKRILDLFGNE 116
Query: 111 AFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLY 170
D V DG+P+V G + Q L++ +++L L G FV K+FR +D +
Sbjct: 117 KADFVCSDGAPDVTGLHDLDEYVQQQLIMSALQLTACILKKGGIFVAKIFRGRDIDMLYS 176
Query: 171 CLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPA 205
L LF+KV KP +SR S E +++ I Y P+
Sbjct: 177 QLGYLFDKVVCAKPKSSRGTSLEAFIVCIGYNPPS 211
>gi|291413158|ref|XP_002722848.1| PREDICTED: FtsJ homolog 1 [Oryctolagus cuniculus]
Length = 333
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 121/213 (56%), Gaps = 6/213 (2%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE+G+R+R+++KL+QLD +F + +DLCAAPGGW QV
Sbjct: 1 MGRTS-KDKRDVYYRLAKENGWRARSAFKLLQLDEEFQLFQGVTRAVDLCAAPGGWSQVL 59
Query: 61 VQRVPV--GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
Q+ G VL +DL +AP+ G ++ DIT+ + K++++ DLV+ D
Sbjct: 60 SQKTGGQEGGQVLAVDLQAMAPLPGVTQIQGDITQ---LSTAKEIIQHFQGCPADLVVCD 116
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+P+V G + Q L++ ++ +AT L P G FV K+FR +D + + L+ F
Sbjct: 117 GAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLRIFFSS 176
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
V KP +SR++S E + + Y P P L
Sbjct: 177 VLCAKPKSSRNSSIEAFAVCQGYDPPEGFKPDL 209
>gi|114051497|ref|NP_001040360.1| cell division protein [Bombyx mori]
gi|95102628|gb|ABF51252.1| cell division protein [Bombyx mori]
Length = 298
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 132/227 (58%), Gaps = 14/227 (6%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYRLAKE G+R+R+++KL+Q++ +++ +DLCAAPG W QV
Sbjct: 1 MGKT-SKDKRDIYYRLAKEEGWRARSAFKLLQINEEYNIFNGVLRAVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGSL------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114
+ + ++ ++ +DL +A + G ++ DITK E + + E G++A DL
Sbjct: 60 TKNLRQNAVNTEDVKIVAVDLQAMAALPGVKQIQGDITKQETANAI--IEEFQGLKA-DL 116
Query: 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQ 174
V+ DG+P+V G + Q+ L++ ++ + T L +GTFV K+FR +D S + LKQ
Sbjct: 117 VVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKNEGTFVAKIFRGKDVSLLYSQLKQ 176
Query: 175 LFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPR----LLDVKYL 217
F+ V V KP +SR++S E +++ KY P P LLD KYL
Sbjct: 177 FFKLVTVSKPRSSRNSSIEAFVICEKYNPPEDYVPNMVNPLLDHKYL 223
>gi|294495192|ref|YP_003541685.1| 23S rRNA Um-2552 2'-O-methyltransferase [Methanohalophilus mahii
DSM 5219]
gi|292666191|gb|ADE36040.1| 23S rRNA Um-2552 2'-O-methyltransferase [Methanohalophilus mahii
DSM 5219]
Length = 264
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 118/201 (58%), Gaps = 6/201 (2%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+HR D YY AK GYRSRA++KL Q++ KF+ +R V+DL AAPGGW++VA R
Sbjct: 3 RHRRDTYYWRAKAEGYRSRAAYKLQQINKKFNVIREDSDVVDLGAAPGGWLEVA--RELT 60
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+G+D++ I P+ + DIT+ E +++K+ + E G D V+ D +PN+ G
Sbjct: 61 KRKVVGVDILRIKPMDRITIIRGDITREETVSQIKEAVGEDGA---DAVICDAAPNLSGN 117
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
W + AL +++ AT+ L P+G FV KVF+ + L ++ F V P A
Sbjct: 118 WNLDHARSIALAESALECATRILKPQGNFVVKVFQGDMFKEYLDKVRGEFTYVRAHSPEA 177
Query: 187 SRSASAEIYLLGIKY-KAPAK 206
SRS SAEIY++G K+ AP +
Sbjct: 178 SRSESAEIYVVGKKFLTAPIR 198
>gi|224286965|gb|ACN41184.1| unknown [Picea sitchensis]
Length = 309
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 22/227 (9%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+Q+D +F+ V+DLCAAPG W QV
Sbjct: 1 MGKAS-KDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGS------------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEH- 107
+++ + + L++ +DL P+A I G + ++ DIT AR +V+ +H
Sbjct: 60 SRKLYLPAKAAAQSRDEELPLIVAIDLQPMASIEGVIQVQGDITS----ARTAEVVIKHF 115
Query: 108 -GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYS 166
G +A DLV+ DG+P+V G + Q+ L++ ++ + T L G F+ K+FR +D +
Sbjct: 116 DGCKA-DLVVCDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLRVGGKFIAKIFRGKD-T 173
Query: 167 SVLYC-LKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLL 212
S+LYC LK F V KP + R++S E + + Y P DP L
Sbjct: 174 SLLYCQLKMFFSTVTFAKPKSGRNSSIEAFAVCENYNPPEGFDPNNL 220
>gi|357123662|ref|XP_003563527.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like
[Brachypodium distachyon]
Length = 318
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 127/219 (57%), Gaps = 22/219 (10%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+Q+D +F+ V+DLCAAPG W QV
Sbjct: 1 MGKAS-KDKRDIYYRKAKEEGWRARSAFKLLQIDQEFNIFHGVKRVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGS------------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEH- 107
+ + + + L++ +DL P+API G + ++ DIT AR +V+ H
Sbjct: 60 SRNLYLPAKLSSDCKDGGLPLIVAIDLQPMAPIEGVIQVQGDIT----NARTAEVVIRHF 115
Query: 108 -GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYS 166
G +A DLV+ DG+P+V G + Q+ L++ ++ + T L G FV K+FR +D +
Sbjct: 116 DGCKA-DLVVCDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLKVGGKFVAKIFRGKD-T 173
Query: 167 SVLYC-LKQLFEKVEVDKPAASRSASAEIYLLGIKYKAP 204
S+LYC LK F +V KP +SR++S E + + Y P
Sbjct: 174 SLLYCQLKLFFSRVTFAKPKSSRNSSIEAFAVCENYSPP 212
>gi|324513843|gb|ADY45670.1| Ribosomal RNA methyltransferase [Ascaris suum]
Length = 370
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 126/220 (57%), Gaps = 13/220 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYRLAKE G+R+R+++KL+Q+D +F+ +DLCAAPG W QV
Sbjct: 1 MGKT-SKDKRDIYYRLAKEEGWRARSAFKLMQIDDEFNIFEGVTRAVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGS---------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRA 111
+R+ G ++ +DL P++P+ G + L+ DIT+ + E G +A
Sbjct: 60 SKRLYFGEKDEQKRSEVRIVAVDLQPMSPLPGVIQLQGDITESSTAESIISHFE--GSKA 117
Query: 112 FDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYC 171
DLV+ DG+P+V G + + Q+ L++ ++ + T L GTF+ K+FR+++ S +
Sbjct: 118 -DLVVCDGAPDVTGLHSLDEYMQSQLILAALNITTFVLKESGTFIAKIFRAKNVSLLYAQ 176
Query: 172 LKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
LK FE+V KP +SR +S E +++ ++ P P +
Sbjct: 177 LKFFFEEVYCAKPRSSRQSSCEAFVVCKRFHLPTGYVPTV 216
>gi|254572155|ref|XP_002493187.1| 2'-O-ribose methyltransferase, methylates the 2'-O-ribose of
nucleotides [Komagataella pastoris GS115]
gi|238032985|emb|CAY71008.1| 2'-O-ribose methyltransferase, methylates the 2'-O-ribose of
nucleotides [Komagataella pastoris GS115]
gi|328352798|emb|CCA39196.1| ribosomal RNA large subunit methyltransferase E [Komagataella
pastoris CBS 7435]
Length = 311
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 121/210 (57%), Gaps = 12/210 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+QL+ +F+ + V+DLCAAPG W QV
Sbjct: 1 MGKTS-KDKRDLYYRRAKEEGWRARSAFKLLQLNEQFNLFKDVRRVVDLCAAPGSWSQVL 59
Query: 61 VQRV--------PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAF 112
+ + + ++ +DL P++PI G +L+ DIT P+ ++K++E G
Sbjct: 60 SRELYEKQSNNSETPAKIVAVDLQPMSPIDGVTTLQADITHPK---TLEKILEIFGGEPA 116
Query: 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCL 172
D V DG+P+V G + Q+ L++ +++L T L P G+FV K+FR +D + +
Sbjct: 117 DFVCSDGAPDVTGLHDLDEYIQSQLILSALQLTTCILKPGGSFVAKIFRGKDIDLLYSQM 176
Query: 173 KQLFEKVEVDKPAASRSASAEIYLLGIKYK 202
LFE V KP +SR S E +++ Y+
Sbjct: 177 GFLFEHVTCAKPRSSRGTSLESFIVCQGYR 206
>gi|268323180|emb|CBH36768.1| putative ribosomal RNA large subunit methyltransferase J
[uncultured archaeon]
Length = 204
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 109/192 (56%), Gaps = 1/192 (0%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D++Y+ AKE GYRSR+++KL+Q+++KF +R+ VLDL AAPGGW QVA V LV
Sbjct: 10 DRFYKSAKELGYRSRSAFKLLQINTKFGLIRAGDVVLDLGAAPGGWSQVAYGLVGDSGLV 69
Query: 71 LGLDLVPIAPIRGAVSLEQDITK-PECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQ 129
L +DL P+ I V L++DI K E A +K V+ G D V+ D SP + G
Sbjct: 70 LSVDLQPMENIADIVILKRDIAKEQETLAAIKAVLNRKGHELVDAVISDLSPQLSGTRDY 129
Query: 130 EAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRS 189
+ + L ++ +A+ L G FV K+F+ Y+ C+K F PAASR
Sbjct: 130 DQFRSSELSTSALNIASALLRNNGNFVAKIFQGAYYNEFYKCVKAKFRYTRAHSPAASRK 189
Query: 190 ASAEIYLLGIKY 201
SAE+Y++G Y
Sbjct: 190 GSAEMYVIGKGY 201
>gi|167526100|ref|XP_001747384.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774219|gb|EDQ87851.1| predicted protein [Monosiga brevicollis MX1]
Length = 302
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 126/215 (58%), Gaps = 8/215 (3%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYR AKE GYR+R+++KL+QLD +F R+ V+DLCAAPG W QV
Sbjct: 1 MGR-GSKDKRDIYYRQAKEEGYRARSAFKLLQLDEEFDIFRNVERVVDLCAAPGSWSQVL 59
Query: 61 VQRV-PVGS---LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
Q++ P + ++ +DL +AP+ G + ++ DITK A +++++ DLV+
Sbjct: 60 SQKLRPTENDRVKIVAVDLQAMAPLPGVIQMQGDITK---EATAQEIVQHFDGGYADLVV 116
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
DG+P+V G + Q+ L++ ++ ++T L GTF+ K+FR +D + L+ F
Sbjct: 117 SDGAPDVTGLHDIDEYVQSQLILAALNISTHVLKRGGTFIAKIFRGRDVQLLYAQLETFF 176
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
+ V KP +SR++S E +++ + Y P P +
Sbjct: 177 DVVTCSKPRSSRNSSIEAFVVCVGYNPPEGYTPHM 211
>gi|444323463|ref|XP_004182372.1| hypothetical protein TBLA_0I01940 [Tetrapisispora blattae CBS 6284]
gi|387515419|emb|CCH62853.1| hypothetical protein TBLA_0I01940 [Tetrapisispora blattae CBS 6284]
Length = 300
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 126/236 (53%), Gaps = 20/236 (8%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHA--VLDLCAAPGGWMQ 58
MGK K + D YYR AKE GYR+R+++KL+QL+ +F FL + V+DLCAAPG W Q
Sbjct: 1 MGK-SSKDKRDVYYRKAKELGYRARSAFKLLQLNEQFHFLDDPNLKRVVDLCAAPGSWSQ 59
Query: 59 VAVQRVPVG-----------SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEH 107
V + + G ++ +DL P++PI L+ DIT P + K++E
Sbjct: 60 VLSKTMFKGIKESEVTEDDERKIVAVDLQPMSPIDHVTRLQADITHPR---TLNKILELF 116
Query: 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSS 167
D V DG+P+V G + Q L++ +++L T L G FV K+FR +D +
Sbjct: 117 NNSKADFVCSDGAPDVTGLHDLDEYVQQQLIMSALQLTTCILKEGGIFVAKIFRGRDINL 176
Query: 168 VLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL---LDVKYLFQG 220
+ L LFE+V KP +SR S E +++ I Y P P+L + V+ FQG
Sbjct: 177 LYTQLGYLFEQVICAKPRSSRGTSLEAFIVCIGYIPPKGWQPKLDENISVQEFFQG 232
>gi|367006785|ref|XP_003688123.1| hypothetical protein TPHA_0M01140 [Tetrapisispora phaffii CBS 4417]
gi|357526430|emb|CCE65689.1| hypothetical protein TPHA_0M01140 [Tetrapisispora phaffii CBS 4417]
Length = 313
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 122/221 (55%), Gaps = 14/221 (6%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHA--VLDLCAAPGGWMQ 58
MGK + K + D YYR AKE GYR+R+++KL+QL+ ++ FL + V+DLCAAPG W Q
Sbjct: 1 MGK-RSKDKRDLYYRKAKEQGYRARSAFKLLQLNEQYHFLDDPNLKRVVDLCAAPGSWSQ 59
Query: 59 VAVQRVPV--------GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVR 110
V +++ V G ++ +DL P++PI L+ DIT P+ K++E G
Sbjct: 60 VLSRKLFVDNKSEDDSGKKIIAVDLQPMSPIDNVTCLQADITHPK---TFNKILELFGNE 116
Query: 111 AFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLY 170
V DG+P+V G + Q L++ +++L T L G F+ K+FR +D +
Sbjct: 117 KAQFVCSDGAPDVTGLHDLDEYVQQQLIMSALQLTTCILEKGGVFIAKIFRGRDIDLLYS 176
Query: 171 CLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
L LF+K+ KP +SR S E +++ + Y P P+L
Sbjct: 177 QLGFLFKKIICAKPRSSRGTSLEAFIVCLDYCPPKDWVPKL 217
>gi|349686269|ref|ZP_08897411.1| ribosomal RNA large subunit 23S methyltransferase RrmJ
[Gluconacetobacter oboediens 174Bp2]
Length = 254
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 121/208 (58%), Gaps = 12/208 (5%)
Query: 2 GKVKGKHRL------DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGG 55
G+ +HR D Y + A++ G+RSRA++KL++LD +F +R V+DL AAPGG
Sbjct: 47 GRTTAQHRWLQRQLNDPYVQAAQKQGWRSRAAFKLIELDDRFQLIRPGARVVDLGAAPGG 106
Query: 56 WMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV 115
W QVAV+R + V+G+DL+P+ P+ GA +E D P+ R+ ++ G RA D+V
Sbjct: 107 WTQVAVKR--GAAEVVGVDLLPVDPVPGATIIEGDFNDPDMPDRLTGLL---GGRA-DVV 160
Query: 116 LHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL 175
+ D +PN G + + L ++ A + LAP GTFV KVF+ +L LK++
Sbjct: 161 MSDMAPNTTGHAPTDHLRIIGLAELALDFAVRILAPGGTFVAKVFQGGSEKQMLADLKRM 220
Query: 176 FEKVEVDKPAASRSASAEIYLLGIKYKA 203
F +V KP ASR S+E+Y++ ++
Sbjct: 221 FTQVRHAKPPASRKESSELYVVATGFRG 248
>gi|66814044|ref|XP_641201.1| rRNA methyltransferase [Dictyostelium discoideum AX4]
gi|74855831|sp|Q54VA8.1|RRMJ1_DICDI RecName: Full=rRNA methyltransferase 1 homolog; AltName: Full=rRNA
(uridine-2'-O-)-methyltransferase 1
gi|60469225|gb|EAL67220.1| rRNA methyltransferase [Dictyostelium discoideum AX4]
Length = 270
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 126/219 (57%), Gaps = 11/219 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+Q+D ++ V+DLCAAPG W QV
Sbjct: 1 MGK-SSKDKRDIYYRKAKEEGWRARSAFKLIQIDEEYQIFEGVKRVVDLCAAPGSWSQVL 59
Query: 61 VQRV------PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114
+R+ P +V +DL +AP++G V ++ DITK E K+++ DL
Sbjct: 60 SRRIYGDGKDPDVKIV-AVDLQEMAPLKGVVQIKGDITKYETS---KQIISHFDGSLADL 115
Query: 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQ 174
++ DG+P+V G + Q+ L++ ++ + T L GTFV K+F+ D S + +K
Sbjct: 116 IISDGAPDVTGLHDIDFYGQSQLILSALNITTHTLKIGGTFVAKMFKGDDMSLMYSQMKL 175
Query: 175 LFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLD 213
FE V KP++SR +S E ++L Y+ P +P+++D
Sbjct: 176 FFEHVSFVKPSSSRESSLENFILCRNYQPPLNYNPKIID 214
>gi|357446585|ref|XP_003593568.1| rRNA methyltransferase-like protein [Medicago truncatula]
gi|355482616|gb|AES63819.1| rRNA methyltransferase-like protein [Medicago truncatula]
Length = 316
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 128/225 (56%), Gaps = 22/225 (9%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK R D YYR AKE G+R+R+++KL+Q+D +F+ V+DLCAAPG W QV
Sbjct: 1 MGKASRDKR-DIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGS------------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEH- 107
+++ + + L++ +DL P+API G + ++ DIT AR +V+ H
Sbjct: 60 SRKLYLPAKLAPDAKDENLPLIVAIDLQPMAPIEGVIQVQGDITN----ARTAEVVIRHF 115
Query: 108 -GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYS 166
G +A +LV+ DG+P+V G + Q+ L++ + + T L G F+ K+FR +D +
Sbjct: 116 DGCKA-NLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHVLKEGGKFIAKIFRGKD-T 173
Query: 167 SVLYC-LKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPR 210
S+LYC LK F V KP +SR++S E + + Y P +P+
Sbjct: 174 SLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPK 218
>gi|410670198|ref|YP_006922569.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanolobus
psychrophilus R15]
gi|409169326|gb|AFV23201.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanolobus
psychrophilus R15]
Length = 258
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 116/195 (59%), Gaps = 5/195 (2%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+ R D YY AK+ G+RSRAS+KL Q++ K ++S V+DL AAPGGW++VA +
Sbjct: 3 RDRRDNYYWRAKDEGFRSRASYKLFQINEKHQLIKSGDTVVDLGAAPGGWLEVA--KDLS 60
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
G ++G+DL I+PI G +++ DIT ++K++E G+R D+V+ D +PN+ G
Sbjct: 61 GGRIIGVDLQKISPIEGVETIKGDITSDRT---IEKIVEMVGLRGVDVVICDAAPNLSGN 117
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
W+ + L +++ A + L P G FV KVF+ + L + + F + P A
Sbjct: 118 WSLDHARSIDLTTSALECAKKILKPGGHFVVKVFQGDMFKDFLNKMDKNFTFMRSYTPDA 177
Query: 187 SRSASAEIYLLGIKY 201
SRS SAEIY++G K+
Sbjct: 178 SRSQSAEIYVIGKKF 192
>gi|157117994|ref|XP_001658956.1| ribosomal RNA methyltransferase [Aedes aegypti]
gi|108875892|gb|EAT40117.1| AAEL008120-PA [Aedes aegypti]
Length = 306
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 130/222 (58%), Gaps = 14/222 (6%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYRLAKE G+R+R+++KL+ +D F+ +DLCAAPG W QV
Sbjct: 1 MGKT-SKDKRDIYYRLAKEEGWRARSAFKLIHIDEVFNIFEGVTRAVDLCAAPGSWSQVL 59
Query: 61 VQRVPVG-------SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGV-RAF 112
+++ ++ +DL +AP+ G L+ DITK + ++E+ G +
Sbjct: 60 SKKLYENRDKEADDVKIIAVDLQAMAPLPGVTQLQGDITK---LSTANAIIEQFGNGQKA 116
Query: 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYC- 171
LV+ DG+P+V G + Q+ L++ ++ + T L GTF+ K+FR +D +++LY
Sbjct: 117 QLVICDGAPDVTGLHDIDEYIQSQLLLAALNITTHVLTEGGTFIAKIFRGKD-TTLLYSQ 175
Query: 172 LKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLD 213
L+ FEKV + KPA+SR++S E +++ YK P +P++++
Sbjct: 176 LRIFFEKVSIAKPASSRNSSIEAFVVCQSYKPPEGYNPQMIN 217
>gi|161899253|ref|XP_001712853.1| Sbp1 [Bigelowiella natans]
gi|75756346|gb|ABA27241.1| Sbp1 [Bigelowiella natans]
Length = 286
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 123/210 (58%), Gaps = 11/210 (5%)
Query: 11 DKYYRLAKE------HGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV 64
+K++RL+K+ H +RSR+++KL+Q++ KF+ LR ++ ++DLC PGGW+Q+
Sbjct: 39 EKFFRLSKKFKYLYFHSFRSRSAFKLIQIEKKFNLLRFTNRIIDLCCFPGGWLQIIQLLA 98
Query: 65 PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVG 124
L++G+DLV I P++ + ++ I P + K+ + +D +L+DGSPNVG
Sbjct: 99 KRSYLIVGVDLVKIKPLQSVIFIKMSIRSPMLYPALNKISKG---AYYDCLLNDGSPNVG 155
Query: 125 GAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKP 184
++ QN L S K+A + L G+ V+K F S++ + +Y L+ LF+ V + KP
Sbjct: 156 TENIIDSEMQNGLAFFSFKIAIKVLRDGGSLVSKFFISKNLNIFIYLLRILFKYVIILKP 215
Query: 185 AASRSASAEIYLLGIKYKAPAKIDPRLLDV 214
ASR S+E+Y+L + K R LD+
Sbjct: 216 NASRVHSSEVYILNFNFSGFKK--KRYLDI 243
>gi|410907644|ref|XP_003967301.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like
[Takifugu rubripes]
Length = 317
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 126/225 (56%), Gaps = 13/225 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE G+R+R+++KL+QLD +F+ + +DLCAAPG W QV
Sbjct: 1 MGR-SSKDKRDIYYRLAKEEGWRARSAFKLLQLDQEFNLFTGVNRAVDLCAAPGSWSQVL 59
Query: 61 VQRV-----PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV 115
+++ P ++ +DL +AP+ G ++ DITK + ++++ + DLV
Sbjct: 60 SRKLGQEEHPQEVKIVAVDLQAMAPLPGVTQIQGDITK---VSTAQEIIRHFEGQPADLV 116
Query: 116 LHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL 175
+ DG+P+V G + Q L++ ++ + T L P+GTFV K+FR +D + + LK
Sbjct: 117 VCDGAPDVTGLHDVDEYIQAQLLLAALNITTHVLKPRGTFVAKIFRGKDVTLLYSQLKIF 176
Query: 176 FEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPR----LLDVKY 216
F V KP +SR++S E +++ Y P P LLD Y
Sbjct: 177 FSSVTCAKPRSSRNSSIEAFVVCQNYSPPTGFMPNMSNPLLDHSY 221
>gi|170042115|ref|XP_001848783.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Culex
quinquefasciatus]
gi|167865651|gb|EDS29034.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Culex
quinquefasciatus]
Length = 306
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 127/222 (57%), Gaps = 14/222 (6%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR+AKE G+R+R+++KL+ LD F+ +DLCAAPG W QV
Sbjct: 1 MGKT-SKDKRDIYYRMAKEEGWRARSAFKLIHLDENFNIFEGVTRAVDLCAAPGSWSQVL 59
Query: 61 VQRVPVG-------SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHG--VRA 111
+++ ++ +DL +AP+ G L+ DITK + + ++E G RA
Sbjct: 60 SKKLYESRDKDKDDVKIIAVDLQAMAPLPGVTQLQGDITK---LSTAQAIIEHFGNDQRA 116
Query: 112 FDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYC 171
LV+ DG+P+V G + Q+ L++ ++ + T L GTF+ K+FR D + +
Sbjct: 117 -QLVICDGAPDVTGLHDIDEYIQSQLLLAALNITTHVLTIGGTFIAKIFRGHDTTLLYSQ 175
Query: 172 LKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLD 213
L+ FEKV + KPA+SR++S E +++ +YK P P++++
Sbjct: 176 LRIFFEKVSIAKPASSRNSSIEAFVVCQQYKPPEGYVPQMIN 217
>gi|224011377|ref|XP_002295463.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209583494|gb|ACI64180.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 221
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 131/227 (57%), Gaps = 32/227 (14%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG++ R D +YR AKE GYR+R+++KL+Q+D++F L H +DLCAAPGGW QV
Sbjct: 1 MGRLSRDKR-DVFYRKAKETGYRARSAFKLIQIDNEFDLL--VHRAVDLCAAPGGWSQVL 57
Query: 61 VQR-VP----------------------VGS-LVLGLDLVPIAPIRGAVSLEQDITKPEC 96
V+R VP +G+ ++ +DL P+ P+ G ++ DIT E
Sbjct: 58 VERIVPQDAVAKTEASTKDKLNGASGENIGTPAIVAVDLWPMEPLPGVHCIQGDITSLET 117
Query: 97 RARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFV 156
++ + HG RA +LV+ DG+P+V + ++ +Q+ L++ ++ ++T L+P G FV
Sbjct: 118 AQKI--IQHFHGRRA-ELVVCDGAPDVTNLHSFDSYTQSQLLLSAINISTHVLSPNGIFV 174
Query: 157 TKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASAEIYLL--GIKY 201
K+FR +D + L+ LFE V KP ASR+AS E +++ G Y
Sbjct: 175 AKIFRGRDVGLIYTQLQLLFENVVCAKPTASRNASIESFVVCRGFGY 221
>gi|356555232|ref|XP_003545938.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like [Glycine
max]
Length = 316
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 128/225 (56%), Gaps = 22/225 (9%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ R D YYR AKE G+R+R+++KL+Q+D +F+ V+DLCAAPG W QV
Sbjct: 1 MGRASRDKR-DIYYRKAKEEGWRARSAFKLLQIDEEFNLFDGVKRVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGS------------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEH- 107
+++ + + L++ +DL P+API G + ++ DIT AR +V+ H
Sbjct: 60 SRKLYLPAKLAPDAKDENLPLIVAIDLQPMAPIEGVIQVQGDITN----ARTAEVVIRHF 115
Query: 108 -GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYS 166
G +A DLV+ DG+P+V G + Q+ L++ + + T L G F+ K+FR +D +
Sbjct: 116 DGCKA-DLVVCDGAPDVTGLHDMDEFVQSQLLLAGLTIVTHVLKEGGKFIAKIFRGKD-T 173
Query: 167 SVLYC-LKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPR 210
S+LYC LK F V KP +SR++S E + + Y P +P+
Sbjct: 174 SLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPK 218
>gi|354545501|emb|CCE42229.1| hypothetical protein CPAR2_807780 [Candida parapsilosis]
Length = 303
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 117/219 (53%), Gaps = 9/219 (4%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE GYR+R+++KL+QLD +F L + V+DLCAAPG W QV
Sbjct: 1 MGKT-SKDKRDLYYRRAKEDGYRARSAYKLLQLDQQFHLLNNITRVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVG--SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAF------ 112
++ + ++ +DL P+ PI +L+ DIT P+ ++ +
Sbjct: 60 SHKLGSNPDARIVAVDLQPMTPIDHVTTLQADITHPKTLQQIMDCFNDDDGGNGDDEGLA 119
Query: 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCL 172
D V DG+P+V G + Q+ LV + +L T L P G+FV K+FR +D + L
Sbjct: 120 DFVCSDGAPDVTGMHDLDEYVQHQLVWAAFQLTTCILKPGGSFVAKIFRGKDIDLMYKQL 179
Query: 173 KQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
+ F KV KP +SR S E +++ + YK P+L
Sbjct: 180 SKFFTKVYCAKPRSSRGTSLEAFIVCLGYKPIPNWTPKL 218
>gi|307109488|gb|EFN57726.1| hypothetical protein CHLNCDRAFT_142970 [Chlorella variabilis]
Length = 325
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/223 (36%), Positives = 124/223 (55%), Gaps = 15/223 (6%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYR AKE G+R+R+++KL+Q+D F V+DLCAAPG W QV
Sbjct: 1 MGRTS-KDKRDIYYRKAKEEGWRARSAFKLLQIDDAFHIFAGVRHVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGSL-----------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGV 109
+R+ + ++ ++ +DL P+API G L+ DIT E AR + + HG
Sbjct: 60 SRRLYLPAVAAGRTGEQLPKIVAVDLQPMAPIEGVTQLQGDITS-EATAR-QVISHFHGH 117
Query: 110 RAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVL 169
A DLV+ DG+P+V G + Q L++ ++ + L P GT V KVFR +D + +
Sbjct: 118 HA-DLVVCDGAPDVTGLHDMDEFVQGQLILAALAIVAHVLVPGGTLVAKVFRGRDIALLY 176
Query: 170 YCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLL 212
LK F V V KP +SR++S E +++ +Y P +P L
Sbjct: 177 SQLKIFFPDVTVAKPKSSRNSSIEAFVVCRRYAPPPGFEPEQL 219
>gi|168042748|ref|XP_001773849.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674836|gb|EDQ61339.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 295
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 127/218 (58%), Gaps = 16/218 (7%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+Q+D +F L + V+DLCAAPG W QV
Sbjct: 1 MGK-SSKDKRDIYYRKAKEEGWRARSAFKLLQIDEEFGILEGAKRVVDLCAAPGSWSQVL 59
Query: 61 VQR-----VPVG---SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEH--GVR 110
++ V G L++ +DL P+API G + ++ DIT A+ +++ H G +
Sbjct: 60 SRKLYQPAVAAGEPHPLIVAIDLQPMAPIDGVLQIQGDITS----AKTAELVIGHFDGGK 115
Query: 111 AFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLY 170
A DLV+ DG+P+V G + Q+ L++ ++ + T L P G FV K+FR +D S +
Sbjct: 116 A-DLVVCDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLRPGGNFVAKIFRGKDISLLYT 174
Query: 171 CLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKID 208
LK F V KP +SR++S E +++ Y P + D
Sbjct: 175 QLKIFFPVVTCAKPKSSRNSSIEAFVVCEGYNPPEQFD 212
>gi|116754447|ref|YP_843565.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanosaeta thermophila
PT]
gi|121694084|sp|A0B8A1.1|RLME_METTP RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|116665898|gb|ABK14925.1| 23S rRNA Um-2552 2'-O-methyltransferase [Methanosaeta thermophila
PT]
Length = 255
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 116/197 (58%), Gaps = 7/197 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D YYR AKE GYR+R+++KL Q++ KF +R V+DL AAPGGW+QVA R G +V
Sbjct: 7 DHYYRKAKEEGYRARSAYKLKQINDKFHIIRRGSRVVDLGAAPGGWLQVA--RELSGGIV 64
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL I P+ G V+++ DITK E ++ + D+V+ D +PN+ G W +
Sbjct: 65 VGVDLERIEPLEGIVTIQGDITKEETLEQIAAALGGQA----DVVISDAAPNLSGIWDVD 120
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
L ++++A + L P G+F+ KVF+ ++ L +K+ F V P ASR
Sbjct: 121 HARSIDLSRAALRIAKRLLRPGGSFLVKVFQGDMFNDYLEEVKREFSSVHAYTPPASRKE 180
Query: 191 SAEIYLLGIK-YKAPAK 206
SAEIY++G K AP +
Sbjct: 181 SAEIYVIGKKLLSAPVR 197
>gi|326513676|dbj|BAJ87857.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 317
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 126/219 (57%), Gaps = 22/219 (10%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+Q+D +F+ +DLCAAPG W QV
Sbjct: 1 MGKAS-KDKRDIYYRKAKEEGWRARSAFKLMQIDQEFNIFHGVERAVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGS------------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEH- 107
+ + + + L++ +DL P+API G + ++ DIT AR +V+ H
Sbjct: 60 SRNLYLPAKLSSDGKDGGLPLIVAIDLQPMAPIEGVIQVQGDIT----NARTAEVVIRHF 115
Query: 108 -GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYS 166
G +A DLV+ DG+P+V G + Q+ L++ ++ + T L G FV K+FR +D +
Sbjct: 116 DGCKA-DLVVCDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLKVGGKFVAKIFRGKD-T 173
Query: 167 SVLYC-LKQLFEKVEVDKPAASRSASAEIYLLGIKYKAP 204
S+LYC LK F +V KP +SR++S E + + Y P
Sbjct: 174 SLLYCQLKLFFSQVTFAKPKSSRNSSIEAFAVCENYSPP 212
>gi|291413885|ref|XP_002723197.1| PREDICTED: FtsJ homolog 1 [Oryctolagus cuniculus]
Length = 333
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 120/213 (56%), Gaps = 6/213 (2%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K D YYRLAKE+G+R+R+++KL+QLD +F + +DLCAAPGGW QV
Sbjct: 1 MGRTS-KDEHDVYYRLAKENGWRARSAFKLLQLDEEFQLFQGVTRAVDLCAAPGGWSQVL 59
Query: 61 VQRVPV--GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
Q+ G VL +DL +AP+ G ++ DIT+ + K++++ DLV+ D
Sbjct: 60 SQKTGGQEGGQVLAVDLQAMAPLPGVTQIQGDITQ---LSTAKEIIQHFQGCPADLVVCD 116
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+P+V G + Q L++ ++ +AT L P G F+ K+FR +D + + L+ F
Sbjct: 117 GAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFMAKIFRGRDVTLLYSQLRIFFSS 176
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
V KP +SR++S E + + Y P P L
Sbjct: 177 VLCAKPKSSRNSSIEAFAVCQAYDPPEGFKPDL 209
>gi|412989217|emb|CCO15808.1| cell division protein [Bathycoccus prasinos]
Length = 306
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 124/228 (54%), Gaps = 23/228 (10%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSS-HAVLDLCAAPGGWMQV 59
MGK K + D YYR AKE G+R+R+++KL+Q+D F + + V+DLCAAPG W QV
Sbjct: 1 MGK-SSKDKRDIYYRKAKEEGWRARSAFKLIQIDESFHLFKENVKNVVDLCAAPGSWSQV 59
Query: 60 AVQRVPVGSL------------------VLGLDLVPIAPIRGAVSLEQDITKPECRARVK 101
+++ + +L ++ +DL P+API G V ++ DIT +C ++
Sbjct: 60 LSRKLYLPTLNEREKREEDVNTTNKPPKIVAVDLQPMAPIEGVVCIQGDITNVDCMRQI- 118
Query: 102 KVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFR 161
+ E G +A DL++ DG+P+V G + Q L++ +K+ L GT+V K+FR
Sbjct: 119 -ISEFEGEKA-DLIVGDGAPDVTGLHDLDEFMQAQLILAGLKVCAHVLKEGGTYVAKIFR 176
Query: 162 SQDYSSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDP 209
+D + LK F KV KP +SR++S E +++ Y P P
Sbjct: 177 GKDIGLLYNQLKCFFPKVTCAKPKSSRNSSIEAFVVCENYSPPKNFQP 224
>gi|189239587|ref|XP_975693.2| PREDICTED: similar to Putative ribosomal RNA methyltransferase 1
(rRNA (uridine-2-O-)-methyltransferase) [Tribolium
castaneum]
Length = 360
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 125/216 (57%), Gaps = 10/216 (4%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK + R D +YR AKE G+R+R+++KL+Q+D KF+ L +DLCAAPG W QV
Sbjct: 1 MGKFS-RDRRDIFYRKAKEQGWRARSAFKLLQIDEKFNILEGVTKAVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGSL---VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVME-EHGVRAFDLVL 116
Q P + ++ +DL P++P+ G + L+ DIT+ + + E +H DLV+
Sbjct: 60 SQ-TPQKNKDVKIVAVDLQPMSPLPGVIQLQGDITEYKTAEAIISHFEGDHA----DLVV 114
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
DG+P+V G + Q L++ ++ + L P GTFV K+FR++D + L LF
Sbjct: 115 CDGAPDVTGLHCIDIYIQAQLLLGALHITCNVLKPGGTFVAKIFRAKDCDLLTQQLLMLF 174
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLL 212
E V KP +SR++S E +++ K+K P DP L+
Sbjct: 175 EDVITVKPTSSRNSSIEAFVVCRKFKPPKGFDPMLI 210
>gi|66811534|ref|XP_639947.1| rRNA methyltransferase [Dictyostelium discoideum AX4]
gi|74854041|sp|Q54NX0.1|RRMJ3_DICDI RecName: Full=rRNA methyltransferase 3 homolog; AltName: Full=rRNA
(uridine-2'-O-)-methyltransferase 3
gi|60466892|gb|EAL64936.1| rRNA methyltransferase [Dictyostelium discoideum AX4]
Length = 833
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 105/159 (66%), Gaps = 3/159 (1%)
Query: 640 ACAKKMLRKKQREQILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQF 699
A + ++RKK R+ ++DD++N+Y F+D GLP+WF ++E RH +A P+TKE + ++ +
Sbjct: 649 ALGEFLIRKKSRQDLIDDSFNKYAFNDTGLPNWFTDDENRHNKAQTPLTKEMVDEIRRKI 708
Query: 700 KEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVP 759
KEID RP KK+AEAKARKK +K+EK R KA+ I D ++S+R K K IE+LY
Sbjct: 709 KEIDDRPIKKIAEAKARKKYRLGKKMEKTRDKASSIVDNPEMSNREKSKAIEKLYSGTDK 768
Query: 760 K--RPKKEYVVAKKGVQVRAGKGKV-LVDPRMKKDSRTH 795
K +PKK ++AKK G GK +VD RMKKD R
Sbjct: 769 KNMKPKKIIMIAKKSKTAGGGTGKYKIVDKRMKKDLRAQ 807
>gi|332025843|gb|EGI65999.1| Putative ribosomal RNA methyltransferase 1 [Acromyrmex echinatior]
Length = 397
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 126/225 (56%), Gaps = 16/225 (7%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQV- 59
MGK K + D YYR AKE G+R+R+++KL+Q+DS+ +DLCAAPG W QV
Sbjct: 1 MGKT-SKDKRDIYYRKAKEEGWRARSAFKLLQIDSECHIFDGVSKAVDLCAAPGSWSQVL 59
Query: 60 ----------AVQRVPVGSL-VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHG 108
A+++ P ++ +DL +AP+ G + L+ DIT ++ +
Sbjct: 60 ARKLTENYKKALEKGPASKPKIVAVDLQAMAPLEGVIQLQGDITNSSTAEQIIAYFDNS- 118
Query: 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSV 168
RA DLV+ DG+P+V G + Q+ L++ ++ +AT L P GTFV K+FR++D S +
Sbjct: 119 -RA-DLVVCDGAPDVTGLHDMDIFIQSQLLLAALNIATYILRPGGTFVAKIFRAKDVSLL 176
Query: 169 LYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLD 213
L+ F V KP++SR++S E +++ Y P +P +L+
Sbjct: 177 YAQLRIFFPYVYCTKPSSSRNSSIEAFVVCKDYSQPEGYEPNMLN 221
>gi|294948998|ref|XP_002786001.1| cell division protein, putative [Perkinsus marinus ATCC 50983]
gi|239900109|gb|EER17797.1| cell division protein, putative [Perkinsus marinus ATCC 50983]
Length = 297
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 127/221 (57%), Gaps = 14/221 (6%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSS-HAVLDLCAAPGGWMQV 59
MG++ K + D YYRLAKE GYR+R+++KL+Q+D +F L V+DLCAAPG W QV
Sbjct: 1 MGRL-SKDKRDIYYRLAKEEGYRARSAYKLLQVDEQFHILTDDLERVVDLCAAPGSWSQV 59
Query: 60 AVQRVP---VGS------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVR 110
+++ GS L++ +DL +API ++ DIT VK+V++ G +
Sbjct: 60 LSKKLCENLTGSDDKKKPLIVSVDLQEMAPIPDVTCIQGDITS---EKTVKEVLDCFGGQ 116
Query: 111 AFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLY 170
DLV+ DG+P+V G + Q L++ ++ + T L P G+FV KVFR ++ +
Sbjct: 117 LSDLVVCDGAPDVTGMHDMDEYVQFQLLLAALNITTLLLKPGGSFVAKVFRGENVDLLYA 176
Query: 171 CLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
+ FE V V KP +SR++S E +++ ++ P PRL
Sbjct: 177 KMYVFFECVWVAKPRSSRNSSVESFIVCKNFRLPKGYTPRL 217
>gi|224146194|ref|XP_002325916.1| predicted protein [Populus trichocarpa]
gi|222862791|gb|EEF00298.1| predicted protein [Populus trichocarpa]
Length = 316
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 127/225 (56%), Gaps = 22/225 (9%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ R D YYR AKE G+R+R+++KL+Q+D +F+ V+DLCAAPG W QV
Sbjct: 1 MGRASRDKR-DIYYRKAKEEGWRARSAFKLIQIDEEFNIFEGVKRVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGS------------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEH- 107
+++ + + L++ +DL P+A I G + ++ DIT AR +V+ H
Sbjct: 60 SRKLYLPAKLSPDSRDNDLPLIVAIDLQPMALIEGVIQVQGDITN----ARTAEVVIRHF 115
Query: 108 -GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYS 166
G +A DLV+ DG+P+V G + Q+ L++ + + T L G F+ K+FR +D +
Sbjct: 116 DGSKA-DLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHVLKEGGKFIAKIFRGKD-T 173
Query: 167 SVLYC-LKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPR 210
S+LYC LK F V KP +SR++S E + + Y P DP+
Sbjct: 174 SLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYSPPEGFDPK 218
>gi|330506929|ref|YP_004383357.1| ribosomal RNA large subunit methyltransferase J [Methanosaeta
concilii GP6]
gi|328927737|gb|AEB67539.1| ribosomal RNA large subunit methyltransferase J [Methanosaeta
concilii GP6]
Length = 256
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 130/232 (56%), Gaps = 11/232 (4%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D YYR AKE GYR+R+++KL+Q++ KF ++ +V+DL AAPGGW+QVA Q++ G +V
Sbjct: 7 DHYYRKAKEEGYRARSAYKLLQINEKFHVIKKGDSVVDLGAAPGGWLQVA-QKLSGGKIV 65
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
G+DL I PI G V+ DIT +VK + D+V+ D +PN+ GAW ++
Sbjct: 66 -GVDLEGITPIPGVVTFRADITALSTVDQVKDALGGDA----DVVICDAAPNLSGAWDRD 120
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
L ++++A + L P+G FV KVF+ + L +++ F V PAASR
Sbjct: 121 HAISIDLARSALEMAKKLLRPRGNFVVKVFQGDMFIDFLNDVRREFAVVHAHSPAASRKE 180
Query: 191 SAEIYLLGIK-YKAPAK----IDPRLLDVKYLFQGSVEPRKVVDVLRGTKQK 237
SAE Y++G K AP + ++ R+ V G ++RG+K K
Sbjct: 181 SAETYVVGKKLLSAPVRKGDMLNVRIESVGKSGDGVAMVEGFAIIVRGSKLK 232
>gi|239790974|dbj|BAH72013.1| ACYPI009233 [Acyrthosiphon pisum]
Length = 307
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 124/217 (57%), Gaps = 9/217 (4%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYRLAKE G+R+R+++KL+Q++S+F L V+DLCAAPG W QV
Sbjct: 1 MGK-SSKDKRDIYYRLAKEQGWRARSAFKLIQINSQFKVLDGVKRVVDLCAAPGSWSQVL 59
Query: 61 VQRV------PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114
+ + ++ +DL +AP+ G V L+ DITK + + + G R DL
Sbjct: 60 SKALYSDSDDKDDVKIVAVDLQSMAPLPGVVQLKGDITKESTANEI--LAQFDGGRLVDL 117
Query: 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQ 174
V+ DG+P+V G + Q L++ ++ + T L P GTF+ K+FR +D S ++ L+
Sbjct: 118 VVFDGAPDVTGLHDLDEYVQAQLLLAALNITTYLLKPGGTFIGKIFRGKDSSLLISQLEI 177
Query: 175 LFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
F V V KP +SR++S E +++ ++ P P +
Sbjct: 178 FFGDVVVAKPCSSRNSSIESFVVCRDFRLPDGYTPTM 214
>gi|162147649|ref|YP_001602110.1| ribosomal RNA large subunit methyltransferase J [Gluconacetobacter
diazotrophicus PAl 5]
gi|209542278|ref|YP_002274507.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Gluconacetobacter
diazotrophicus PAl 5]
gi|161786226|emb|CAP55808.1| putative ribosomal RNA large subunit methyltransferase J
[Gluconacetobacter diazotrophicus PAl 5]
gi|209529955|gb|ACI49892.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Gluconacetobacter
diazotrophicus PAl 5]
Length = 264
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 111/192 (57%), Gaps = 6/192 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y + A++ G+RSRA++KL++LD +F +R V+DL AAPGGW QVAV+R + V
Sbjct: 67 DPYVQAARKQGWRSRAAFKLIELDDRFHLIRPGMRVIDLGAAPGGWTQVAVKR--GAAYV 124
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL+P+ P+ GA +E D P+ AR+ ++ DLVL D +PN G +
Sbjct: 125 VGVDLLPVDPVAGATIIEGDFNDPDMPARLIDLLGGPA----DLVLSDMAPNTTGHAPTD 180
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ L ++ A + LAP G FV KVF+ +L +KQ F V KP ASR
Sbjct: 181 HLRIIGLAELALDFAVKVLAPGGGFVAKVFQGGSEKQMLAPMKQAFATVRHAKPPASRKE 240
Query: 191 SAEIYLLGIKYK 202
S+E+Y++ ++
Sbjct: 241 SSELYVVATGFR 252
>gi|403297460|ref|XP_003939580.1| PREDICTED: putative ribosomal RNA methyltransferase 1 [Saimiri
boliviensis boliviensis]
Length = 327
Score = 135 bits (340), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 131/234 (55%), Gaps = 10/234 (4%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE+G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 1 MGRTS-KDKRDVYYRLAKENGWRARSAFKLLQLDKEFHLFQGVTRAVDLCAAPGSWSQVL 59
Query: 61 VQRV-PVGS-LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
Q++ GS V+ +DL +AP+ G V ++ DIT+ + K++++ DLV+ D
Sbjct: 60 SQKIGGQGSGHVVAVDLQAMAPLPGVVQIQGDITQ---LSTAKEIIQHFKGCPADLVVCD 116
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+P+V G + Q L++ ++ +AT L P G FV K+FR +D + + L+ F
Sbjct: 117 GAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLRVFFSS 176
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDP----RLLDVKYLFQGSVEPRKVV 228
V KP +SR++S E + + Y P P LLD Y F P +++
Sbjct: 177 VLCAKPRSSRNSSIEAFAVCQGYDPPEGFMPDLSKPLLDHSYDFNQLDGPTRII 230
>gi|410988503|ref|XP_004000523.1| PREDICTED: putative ribosomal RNA methyltransferase 1 [Felis catus]
Length = 329
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 129/226 (57%), Gaps = 8/226 (3%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE+G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 1 MGRTS-KDKRDVYYRLAKENGWRARSAFKLLQLDEEFQLFQGVTRAVDLCAAPGSWSQVL 59
Query: 61 VQRV-PVGS-LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
Q++ GS V+ +DL +AP+ G + ++ DIT+ + K++++ DLV+ D
Sbjct: 60 SQKIGGQGSGHVVAVDLQAMAPLPGVLQIQGDITQ---LSTAKEIIQHFEGCPADLVVCD 116
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+P+V G + Q L++ ++ +AT L P G FV K+FR +D + + L+ F
Sbjct: 117 GAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLIYSQLRVFFSS 176
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEP 224
V KP +SR++S E + + Y PA P L K L S +P
Sbjct: 177 VLCAKPRSSRNSSIEAFAVCQGYDPPAGFLPDL--TKPLLDHSYDP 220
>gi|242217156|ref|XP_002474380.1| predicted protein [Postia placenta Mad-698-R]
gi|220726487|gb|EED80435.1| predicted protein [Postia placenta Mad-698-R]
Length = 388
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/215 (43%), Positives = 137/215 (63%), Gaps = 27/215 (12%)
Query: 600 QVSEVEGDFEIVPAPGADSSDDSS-----SDESEDEEVDTK--------AEILACAKKML 646
Q S+ E DFE+VP + DDS+ +E+EDE + K E + A+K++
Sbjct: 160 QTSDDEDDFEVVP----QAPDDSAYMWDVENENEDELKEAKIRKHGLVTPEAVTIAQKLV 215
Query: 647 -RKKQREQILDDAYNRYMFD-DDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDA 704
R+K R ++++D +NRY + DGLP WFL++E +H + PVTKE + A++A+ + +DA
Sbjct: 216 NREKTRTELINDGFNRYSLNAKDGLPPWFLDDEDKHYKPNIPVTKEAVDALRAKMRALDA 275
Query: 705 RPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKK 764
RP KKVAEAKARKK A ++LEK KKA +++ DI++R K KQIE+L + + K+ KK
Sbjct: 276 RPIKKVAEAKARKKMRAAQRLEKAMKKAEGVNETTDITEREKAKQIEKLMQKGMAKKQKK 335
Query: 765 E--YVVAK---KGVQVR--AGKGK-VLVDPRMKKD 791
E VVAK KGV+ R KG+ V+VD RMKK+
Sbjct: 336 EVKLVVAKGAHKGVKGRPKGVKGRYVMVDSRMKKE 370
>gi|45201131|ref|NP_986701.1| AGR036Wp [Ashbya gossypii ATCC 10895]
gi|44985914|gb|AAS54525.1| AGR036Wp [Ashbya gossypii ATCC 10895]
gi|374109952|gb|AEY98857.1| FAGR036Wp [Ashbya gossypii FDAG1]
Length = 306
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 118/216 (54%), Gaps = 9/216 (4%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+QL+ +F FL V+DLCAAPG W QV
Sbjct: 1 MGK-SSKDKRDLYYRKAKEQGFRARSAFKLLQLNDEFHFLDGVQRVVDLCAAPGSWSQVL 59
Query: 61 VQRV-PVGS----LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV 115
+ + P G ++ +DL P++ I +L+ DIT P + K++E D V
Sbjct: 60 SRELFPDGKNTKKRIVAVDLQPMSRIEHVTTLQADITHPR---TLTKIIELFKGEKADFV 116
Query: 116 LHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL 175
DG+P+V G + Q L++ ++KL LAP G FV K+FR +D + L L
Sbjct: 117 CSDGAPDVTGLHDLDEYVQQQLILSALKLTVSLLAPGGCFVAKIFRGRDIDMLYSQLGLL 176
Query: 176 FEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
F+KV KP +SR S E +++ Y P P +
Sbjct: 177 FDKVTCAKPRSSRGTSLESFIVCQGYTPPLSWAPNI 212
>gi|296080818|ref|NP_001171684.1| FtsJ RNA methyltransferase homolog 1 [Sus scrofa]
gi|197281892|gb|ACH57153.1| FtsJ-like protein 1 [Sus scrofa]
Length = 329
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 128/226 (56%), Gaps = 8/226 (3%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE+G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 1 MGRTS-KDKRDVYYRLAKENGWRARSAFKLLQLDEEFQLFQGVTRAVDLCAAPGSWSQVL 59
Query: 61 VQRV-PVGS-LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
Q++ GS V+ +DL +AP+ G + ++ DIT+ K++++ DLV+ D
Sbjct: 60 SQKIGGQGSGHVVAVDLQAMAPLPGVLQIQGDITQ---LTTAKEIIQHFEGCPADLVVCD 116
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+P+V G + Q L++ ++ +AT L P G FV K+FR +D + + L+ F
Sbjct: 117 GAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLIYSQLRVFFSS 176
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEP 224
V KP +SR++S E + + Y PA P L K L S +P
Sbjct: 177 VLCAKPRSSRNSSIEAFAVCKGYDPPAGFLPDL--TKPLLDHSYDP 220
>gi|348523421|ref|XP_003449222.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like isoform
2 [Oreochromis niloticus]
Length = 309
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 125/221 (56%), Gaps = 9/221 (4%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE G+R+R+++KL+QLD +F+ + +DLCAAPG W QV
Sbjct: 1 MGR-SSKDKRDIYYRLAKEEGWRARSAFKLLQLDQEFNLFTGVNRAVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGSL-VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDG 119
+++ + ++ +DL +AP+ G ++ DITK + ++++ + DLV+ DG
Sbjct: 60 SRKLSGEEVKIVAVDLQAMAPLPGVTQIQGDITK---VSTAQEIIRHFEGQPADLVVCDG 116
Query: 120 SPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKV 179
+P+V G + Q L++ ++ + T L P GTFV K+FR +D + + LK F V
Sbjct: 117 APDVTGLHDVDEYIQAQLLLAALNITTHVLKPGGTFVAKIFRGKDVTLLYSQLKLFFNGV 176
Query: 180 EVDKPAASRSASAEIYLLGIKYKAPAKIDPR----LLDVKY 216
KP +SR++S E +++ Y P P LLD Y
Sbjct: 177 TCTKPRSSRNSSIEAFVVCQNYSPPKGYIPNMSNPLLDHSY 217
>gi|358060101|dbj|GAA94160.1| hypothetical protein E5Q_00808 [Mixia osmundae IAM 14324]
Length = 312
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 117/199 (58%), Gaps = 7/199 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVG--- 67
D +YRLAK GYR+R+++KL+ LD +F R +DLCAAPG W QV + VG
Sbjct: 30 DIFYRLAKSDGYRARSAYKLLHLDEEFDLFRGVTRCIDLCAAPGSWSQVLSDALIVGKEQ 89
Query: 68 -SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
++++ +DL P+A + G V L DITK A ++++E LV+ DG+P+V G
Sbjct: 90 DAVIVAVDLQPMAALPGVVQLVGDITK---LATAQRIIEYFKGEKAQLVVCDGAPDVTGL 146
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ Q+ L++ ++ + L P+GTF+ K+FR +D + + L+ LF KV+ KP +
Sbjct: 147 HDLDEFMQSRLLLAALNITLHTLEPRGTFIAKIFRGKDVTLLFDQLECLFGKVDCAKPRS 206
Query: 187 SRSASAEIYLLGIKYKAPA 205
SR +S E +++ ++ PA
Sbjct: 207 SRDSSIEAFVVCQDFRPPA 225
>gi|347971002|ref|XP_318425.5| AGAP003974-PA [Anopheles gambiae str. PEST]
gi|333469586|gb|EAA13594.5| AGAP003974-PA [Anopheles gambiae str. PEST]
Length = 307
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 126/222 (56%), Gaps = 13/222 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYRLAKE G+R+R+++KL+ +D F +DLCAAPG W QV
Sbjct: 1 MGKT-SKDKRDIYYRLAKEEGWRARSAFKLIHIDEVFQIFDGVTRAVDLCAAPGSWSQVL 59
Query: 61 VQRV-----PVG---SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHG-VRA 111
+R+ P ++ +DL + P+ G + L+ DITK + + ++E G +
Sbjct: 60 SKRLYESRDPAERDEVKIIAVDLQTMGPLPGIIQLQGDITK---LSTAEAIIEHFGDQQK 116
Query: 112 FDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYC 171
LV+ DG+P+V G + Q+ L++ ++ + T L P GTFV K+FR +D S +
Sbjct: 117 AQLVICDGAPDVTGLHDIDEYIQSQLLLAALNITTHVLTPGGTFVAKIFRGKDTSLLYSQ 176
Query: 172 LKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLD 213
L+ FE+V + KP +SR++S E +++ Y+ P P+L++
Sbjct: 177 LRIFFERVTIAKPPSSRNSSIEAFVVCQDYRPPEGYVPQLIN 218
>gi|380811280|gb|AFE77515.1| putative ribosomal RNA methyltransferase 1 isoform b [Macaca
mulatta]
gi|383417199|gb|AFH31813.1| putative ribosomal RNA methyltransferase 1 isoform b [Macaca
mulatta]
Length = 327
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 131/234 (55%), Gaps = 10/234 (4%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE+G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 1 MGRTS-KDKRDVYYRLAKENGWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVL 59
Query: 61 VQRV-PVGS-LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
Q++ GS V+ +DL +AP+ G V ++ DIT+ + K++++ DLV+ D
Sbjct: 60 SQKIGGQGSGHVVAVDLQAMAPLPGVVQIQGDITQ---LSTAKEIIQHFKGCPADLVVCD 116
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+P+V G + Q L++ ++ +AT L P G FV K+FR +D + + L+ F
Sbjct: 117 GAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLRVFFSS 176
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDP----RLLDVKYLFQGSVEPRKVV 228
V KP +SR++S E + + Y P P LLD Y F P +++
Sbjct: 177 VLCAKPRSSRNSSIEAFAVCQGYDPPEGFIPDLSKPLLDHSYDFNQLDGPTRII 230
>gi|348523419|ref|XP_003449221.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like isoform
1 [Oreochromis niloticus]
Length = 313
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 125/225 (55%), Gaps = 13/225 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE G+R+R+++KL+QLD +F+ + +DLCAAPG W QV
Sbjct: 1 MGR-SSKDKRDIYYRLAKEEGWRARSAFKLLQLDQEFNLFTGVNRAVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGSL-----VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV 115
+++ G ++ +DL +AP+ G ++ DITK + ++++ + DLV
Sbjct: 60 SRKLRGGESGEEVKIVAVDLQAMAPLPGVTQIQGDITK---VSTAQEIIRHFEGQPADLV 116
Query: 116 LHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL 175
+ DG+P+V G + Q L++ ++ + T L P GTFV K+FR +D + + LK
Sbjct: 117 VCDGAPDVTGLHDVDEYIQAQLLLAALNITTHVLKPGGTFVAKIFRGKDVTLLYSQLKLF 176
Query: 176 FEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPR----LLDVKY 216
F V KP +SR++S E +++ Y P P LLD Y
Sbjct: 177 FNGVTCTKPRSSRNSSIEAFVVCQNYSPPKGYIPNMSNPLLDHSY 221
>gi|225440636|ref|XP_002278921.1| PREDICTED: putative ribosomal RNA methyltransferase 1 [Vitis
vinifera]
gi|297740237|emb|CBI30419.3| unnamed protein product [Vitis vinifera]
Length = 316
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/219 (36%), Positives = 125/219 (57%), Gaps = 22/219 (10%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK R D YYR AKE G+R+R+++KL+Q+D +F+ V+DLCAAPG W QV
Sbjct: 1 MGKASRDKR-DIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGS------------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEH- 107
+++ + + L++ +DL P+API G + ++ DIT AR +++ H
Sbjct: 60 SRKLFLPAKLSPASRDGDLPLIVAIDLQPMAPIEGVIQVQGDITN----ARTAELVIRHF 115
Query: 108 -GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYS 166
G +A DLV+ DG+P+V G + Q+ L++ + + T L G F+ K+FR +D +
Sbjct: 116 DGCKA-DLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHVLKKGGKFIAKIFRGKD-T 173
Query: 167 SVLYC-LKQLFEKVEVDKPAASRSASAEIYLLGIKYKAP 204
S+LYC LK F V KP +SR++S E + + Y P
Sbjct: 174 SLLYCQLKLFFPIVTFAKPKSSRNSSIEAFAVCENYSPP 212
>gi|195036840|ref|XP_001989876.1| GH18555 [Drosophila grimshawi]
gi|193894072|gb|EDV92938.1| GH18555 [Drosophila grimshawi]
Length = 356
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 124/217 (57%), Gaps = 12/217 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D +YRLAKE G+R+R+++KL+Q D F+ L +DLCAAPGGW QV
Sbjct: 1 MGKT-SKDKRDIFYRLAKEQGWRARSAFKLLQADETFNLLEGVERAVDLCAAPGGWSQVL 59
Query: 61 VQRVPVGSLV--------LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAF 112
+R+ V + +D +API G L DITK + ++E G +
Sbjct: 60 SRRMYEPRTVEEREKVKIIAVDTQGMAPIDGVTQLRADITK---ESTADAIIEFFGGKKA 116
Query: 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCL 172
LV+ DG+P+V G+ +A Q L++ ++ +AT L G+F+ KV+R+ + S V L
Sbjct: 117 QLVVSDGAPDVTGSHDWDAYMQAQLLLSALSIATYILEEGGSFMGKVYRAANTSKVYLQL 176
Query: 173 KQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDP 209
++ F+ V V KP+ASR++S E +++ ++ PA P
Sbjct: 177 QRFFKDVCVFKPSASRNSSIEAFVVARQFSLPAGHVP 213
>gi|442750233|gb|JAA67276.1| Putative sam-dependent rrna methyltransferase spb1 [Ixodes ricinus]
Length = 820
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/167 (48%), Positives = 109/167 (65%), Gaps = 11/167 (6%)
Query: 637 EILACAKKMLR-KKQREQILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAM 695
E LA M+ +K R I+D YNRY F+D+ LP WF EEE++H + PVT E +A
Sbjct: 646 EALALGSMMIHSQKARRDIIDSGYNRYTFNDENLPKWFTEEEKKHTRKHMPVTAEMVAEY 705
Query: 696 KAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYK 755
KAQ K ++ARP KKVAEAKARKK+ A R+LEK RK+A I+++ D++D K +Q+ +YK
Sbjct: 706 KAQLKAVNARPIKKVAEAKARKKQRAARRLEKARKRAEAITEKLDMTDAEKAQQVRAIYK 765
Query: 756 SAVPKRPKKE--YVVAKK--GVQVR-----AGKGKVLVDPRMKKDSR 793
+ + K + Y+VAKK G +VR G+ KV VDPRMKKD R
Sbjct: 766 KVLGDKGKNKVTYLVAKKASGRKVRRPPGVKGRFKV-VDPRMKKDLR 811
>gi|74317150|ref|YP_314890.1| cell division protein FtsJ [Thiobacillus denitrificans ATCC 25259]
gi|123612003|sp|Q3SJR5.1|RLME_THIDA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|74056645|gb|AAZ97085.1| cell division protein FtsJ [Thiobacillus denitrificans ATCC 25259]
Length = 220
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 119/202 (58%), Gaps = 6/202 (2%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y + A++ G+RSRA++KL+++DS+ L V+DL AAPG W QVAVQ++
Sbjct: 17 EHVTDAYVKKAQQDGFRSRAAYKLLEIDSRDHLLHPGMTVVDLGAAPGSWCQVAVQKMKR 76
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
VL +DL+P+AP+ G +L+ D T P+ A ++ ++ V DLVL D +PN+ G
Sbjct: 77 QGRVLAIDLLPVAPLPGVEALQGDFTAPDTLAWLENTLQAARV---DLVLSDMAPNMSGV 133
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
++ L ++ A +L P G F+ KVF+ + +++ F++V + KP A
Sbjct: 134 MLRDQARHYELCELALDFAVNWLKPDGAFLVKVFQGSGFEDFRNAMRRAFDQVVIRKPDA 193
Query: 187 SRSASAEIYLLGIKYKAPAKID 208
SR S+E+YLLG + P K++
Sbjct: 194 SRDRSSEVYLLG---RRPVKLE 212
>gi|71906582|ref|YP_284169.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Dechloromonas aromatica
RCB]
gi|83305658|sp|Q47HI2.1|RLME_DECAR RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|71846203|gb|AAZ45699.1| 23S rRNA Um-2552 2'-O-methyltransferase [Dechloromonas aromatica
RCB]
Length = 205
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 116/196 (59%), Gaps = 11/196 (5%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y +LA++ G+RSRA++KL+++D K L+ V+DL A PGGW QVAV+RV
Sbjct: 13 EHINDTYVQLARKEGWRSRAAFKLMEMDDKDKLLKHGEVVVDLGATPGGWSQVAVKRVGD 72
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
G LV LDL+ + PI G ++ D + E ++++ E+ G R LV+ D +PN+ G
Sbjct: 73 GGLVFALDLLEMEPIHGVHFIQGDFREDEV---LQQLEEQLGERRVGLVMSDMAPNMSGV 129
Query: 127 WAQEAMSQNALVIDSVKLATQF----LAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVD 182
+ A ++ +L +F L P+G F+ KVF+ DY + L +++ F+ V V
Sbjct: 130 ----PLVDQARIMHLAELGLEFSRVHLKPEGAFLVKVFQGTDYETFLKQMRETFKTVAVR 185
Query: 183 KPAASRSASAEIYLLG 198
KP ASR S E+YLLG
Sbjct: 186 KPDASRDRSPELYLLG 201
>gi|336476442|ref|YP_004615583.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanosalsum zhilinae
DSM 4017]
gi|335929823|gb|AEH60364.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanosalsum zhilinae
DSM 4017]
Length = 265
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 113/192 (58%), Gaps = 5/192 (2%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+++ D+YY LAK GYRSRAS+KL Q++ KF+ ++ + V+DL AAPGGW+QVA R
Sbjct: 3 RNQRDRYYWLAKSDGYRSRASYKLQQINKKFNVIKRNDTVVDLGAAPGGWLQVA--RELS 60
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
G V+G+DL I PI +++ DIT ++ ++ EHG D+V+ D +PN+ G
Sbjct: 61 GGKVVGVDLRRIKPIESVDTIKGDITSESTVNKILDLVGEHGA---DVVICDAAPNMSGN 117
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
W+ + L + + + + L P G FV KVF+ + + +K F + P A
Sbjct: 118 WSLDHARSIDLANSAFECSQKILRPGGNFVVKVFQGDMFKEFIDRVKSEFVHTKAYNPEA 177
Query: 187 SRSASAEIYLLG 198
SRS SAEIY++G
Sbjct: 178 SRSQSAEIYVIG 189
>gi|294901600|ref|XP_002777432.1| cell division protein, putative [Perkinsus marinus ATCC 50983]
gi|239885068|gb|EER09248.1| cell division protein, putative [Perkinsus marinus ATCC 50983]
Length = 297
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 127/221 (57%), Gaps = 14/221 (6%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSS-HAVLDLCAAPGGWMQV 59
MG++ K + D YYRLAKE GYR+R+++KL+Q+D +F L V+DLCAAPG W QV
Sbjct: 1 MGRL-SKDKRDIYYRLAKEEGYRARSAYKLLQVDEQFHILTDDLERVVDLCAAPGSWSQV 59
Query: 60 AVQRVP---VGS------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVR 110
+++ GS L++ +DL +API ++ DIT VK+V++ G +
Sbjct: 60 LSKKLCENLRGSDDRKKPLIVSVDLQEMAPIPDVTCIQGDITS---EKTVKEVLDCFGGQ 116
Query: 111 AFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLY 170
DLV+ DG+P+V G + Q L++ ++ + T L P G+FV KVFR ++ +
Sbjct: 117 LSDLVVCDGAPDVTGMHDMDEYVQFQLLLAALNITTLLLKPGGSFVAKVFRGENVDLLYA 176
Query: 171 CLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
+ FE V V KP +SR++S E +++ ++ P PRL
Sbjct: 177 KMYVFFECVWVAKPRSSRNSSVESFIVCKNFRLPKGYTPRL 217
>gi|422294710|gb|EKU22010.1| cell division protein [Nannochloropsis gaditana CCMP526]
Length = 281
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 116/210 (55%), Gaps = 14/210 (6%)
Query: 6 GKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV- 64
GK D YYR AKE G+R+R+++KL+QLD +F R+ +DLCAAPG W QV R+
Sbjct: 2 GKVVRDLYYRKAKEVGFRARSAFKLLQLDEEFGLFRNVQKAVDLCAAPGSWSQVLATRLY 61
Query: 65 PVGSL----------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114
P G+ V+ +DL +API G L+ DIT +A ++ + DL
Sbjct: 62 PDGAFTDDKGGERERVIAVDLQEMAPIPGVRQLQGDITS---QATADTIIGHFEGQRVDL 118
Query: 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQ 174
V+ DG+P+V G + Q L+ ++ + T LA G FV KVFR +D + + L+
Sbjct: 119 VVCDGAPDVTGLHDMDEFLQAQLIFGALAITTHVLASGGKFVAKVFRGRDLTLLAAQLRL 178
Query: 175 LFEKVEVDKPAASRSASAEIYLLGIKYKAP 204
FE + V KPA+SR S+E +++ ++ P
Sbjct: 179 FFESITVAKPASSRVNSSECFVVCEGFQGP 208
>gi|240995616|ref|XP_002404632.1| ribosomal RNA methyltransferase, putative [Ixodes scapularis]
gi|215491634|gb|EEC01275.1| ribosomal RNA methyltransferase, putative [Ixodes scapularis]
Length = 817
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/167 (48%), Positives = 109/167 (65%), Gaps = 11/167 (6%)
Query: 637 EILACAKKMLR-KKQREQILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAM 695
E LA M+ +K R I+D YNRY F+D+ LP WF EEE++H + PVT E +A
Sbjct: 643 EALALGSMMIHSQKARRDIIDSGYNRYTFNDENLPKWFTEEEKKHTRKHMPVTAEMVAEY 702
Query: 696 KAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYK 755
KAQ K ++ARP KKVAEAKARKK+ A R+LEK RK+A I+++ D++D K +Q+ +YK
Sbjct: 703 KAQLKAVNARPIKKVAEAKARKKQRAARRLEKARKRAEAITEKLDMTDAEKAQQVRAIYK 762
Query: 756 SAVPKRPKKE--YVVAKK--GVQVR-----AGKGKVLVDPRMKKDSR 793
+ + K + Y+VAKK G +VR G+ KV VDPRMKKD R
Sbjct: 763 KVLGDKGKNKVTYLVAKKATGRKVRRPPGVKGRFKV-VDPRMKKDLR 808
>gi|29029589|ref|NP_803183.1| putative ribosomal RNA methyltransferase 1 isoform b [Homo sapiens]
gi|29029591|ref|NP_803188.1| putative ribosomal RNA methyltransferase 1 isoform b [Homo sapiens]
gi|397471351|ref|XP_003807259.1| PREDICTED: putative ribosomal RNA methyltransferase 1 isoform 2
[Pan paniscus]
gi|3511153|gb|AAC33734.1| cell division protein [Homo sapiens]
gi|119571169|gb|EAW50784.1| FtsJ homolog 1 (E. coli), isoform CRA_b [Homo sapiens]
gi|410222316|gb|JAA08377.1| FtsJ homolog 1 [Pan troglodytes]
gi|410252888|gb|JAA14411.1| FtsJ homolog 1 [Pan troglodytes]
gi|410290772|gb|JAA23986.1| FtsJ homolog 1 [Pan troglodytes]
gi|410350183|gb|JAA41695.1| FtsJ homolog 1 [Pan troglodytes]
Length = 327
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 131/234 (55%), Gaps = 10/234 (4%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE+G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 1 MGRTS-KDKRDVYYRLAKENGWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVL 59
Query: 61 VQRV-PVGS-LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
Q++ GS V+ +DL +AP+ G V ++ DIT+ + K++++ DLV+ D
Sbjct: 60 SQKIGGQGSGHVVAVDLQAMAPLPGVVQIQGDITQ---LSTAKEIIQHFKGCPADLVVCD 116
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+P+V G + Q L++ ++ +AT L P G FV K+FR +D + + L+ F
Sbjct: 117 GAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLQVFFSS 176
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDP----RLLDVKYLFQGSVEPRKVV 228
V KP +SR++S E + + Y P P LLD Y F P +++
Sbjct: 177 VLCAKPRSSRNSSIEAFAVCQGYDPPEGFIPDLSKPLLDHSYDFNQLDGPTRII 230
>gi|83286571|ref|XP_730220.1| cell division protein FtsJ [Plasmodium yoelii yoelii 17XNL]
gi|23489880|gb|EAA21785.1| FtsJ cell division protein, putative [Plasmodium yoelii yoelii]
Length = 874
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 129/250 (51%), Gaps = 49/250 (19%)
Query: 120 SPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKV 179
+PNVG ++ ++ +QN LV+ S+KLA +FL G F+TKVFR+++Y S+++ L++LF +V
Sbjct: 3 APNVGTTYSYDSFNQNILVLSSIKLAYKFLTKGGIFITKVFRNEEYVSLIWVLEKLFGEV 62
Query: 180 EVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSV--EPRKVVDV------- 230
+ KP +SR S+EIYL+G+ + KID + D Y+F + K+ ++
Sbjct: 63 KHIKPRSSREISSEIYLIGLNF-LGNKIDKKYFDFTYIFSNKFRKDENKLSNIHSKNETE 121
Query: 231 --------------------------LRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNN 264
+ K+K++R GYE GD + + +DFI ++N
Sbjct: 122 DLENDDSENDSDTNNFKNKKKKGLSTILKEKKKKNRQGYEKGDD--YRTADXSDFINNDN 179
Query: 265 PLEILGSVTSITFG-----------DPACSAIKDHELTTEEVKALCDDLRVLGKQDFKHL 313
+++L F AI ++ T E+ LC DL+VLGK D +L
Sbjct: 180 YVDLLIKSNKFIFDKNYKNSSNLLIKNTYEAIYTNKSTNNEIFNLCKDLKVLGKSDLFNL 239
Query: 314 LKWRMQIKKA 323
+KWR +IKK+
Sbjct: 240 IKWRYKIKKS 249
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 123/262 (46%), Gaps = 29/262 (11%)
Query: 541 TNKWFSQEIFAEA---VQNGDL------GKLGSEDETQVD-----------KQAEKHSIP 580
T ++F Q+IF+ + N D+ G+ +DE+Q + KQ K +P
Sbjct: 564 TTRFFDQKIFSNIFNQLNNADVEEGQDEGQDEGQDESQEENSESDIKEINAKQLPKIPLP 623
Query: 581 EKAKQKMANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILA 640
K +K N K +N+ F IV +S + + + ++ D A I
Sbjct: 624 AKLAKKEKNKKLREKYGNNETKIKNASFSIVKTDTNNSENVNEYFSNLIKDDDELAFIKY 683
Query: 641 CAKKMLRKKQREQILDDAYNR--YMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQ 698
+K++ KK R ++DD++NR Y+ D+D LPDWF+EEE+++R+ + P+ K + K +
Sbjct: 684 VGEKLIHKKSRMDLIDDSFNRHSYLEDEDTLPDWFVEEEKKYRKPVIPIDKTVLDQYKNK 743
Query: 699 FKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAV 758
I P KKV EAK R K+ + K++K+ K I D +R L K+
Sbjct: 744 INRITKMPIKKVIEAKMRNKKREITKMKKLEAKIGKIEKDEDDPFLKQRAIANVLKKNKS 803
Query: 759 PKRPKKEYVVAKKGVQVRAGKG 780
K+ +K YVV GKG
Sbjct: 804 EKKREKSYVVC-------TGKG 818
>gi|195110569|ref|XP_001999852.1| GI24754 [Drosophila mojavensis]
gi|193916446|gb|EDW15313.1| GI24754 [Drosophila mojavensis]
Length = 382
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 128/225 (56%), Gaps = 12/225 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K R D +YRLAKE G+R+R+++KL+Q D F+ L +DLCAAPGGW QV
Sbjct: 1 MGKA-SKDRRDIFYRLAKEQGWRARSAFKLLQADETFNLLEGLTRAVDLCAAPGGWSQVL 59
Query: 61 VQRV--PVGS------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAF 112
+R+ P ++ +D+ +API G L DITK + K + G +A
Sbjct: 60 SKRMYEPRSEKDREQVKIIAVDMQGMAPIDGVTQLRADITKESTAEEIIKFFD--GKKA- 116
Query: 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCL 172
+LV+ DG+P+V G +A Q L++ + +AT L GTF+ KV+R+ + S V L
Sbjct: 117 ELVVTDGAPDVTGLHDWDAYMQAELLLSGLSIATYILEEGGTFMGKVYRAANTSRVYLQL 176
Query: 173 KQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYL 217
++ F+ V + KP+ASRS+S E +++ ++ P P L +++
Sbjct: 177 QRFFKDVCLFKPSASRSSSIEAFVVCRQFTMPEGHVPCNLTLEWF 221
>gi|386002741|ref|YP_005921040.1| ribosomal RNA large subunit methyltransferase E [Methanosaeta
harundinacea 6Ac]
gi|357210797|gb|AET65417.1| Ribosomal RNA large subunit methyltransferase E [Methanosaeta
harundinacea 6Ac]
Length = 258
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 116/194 (59%), Gaps = 6/194 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D +YR AK GYR+R+++KL Q++ +F +R AVLDL AAPGGW+QVA + G V
Sbjct: 7 DYFYRKAKAEGYRARSAFKLQQINQRFRLIRRGDAVLDLGAAPGGWLQVAKE--ISGGRV 64
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL+ I PI G +++ DIT PE ++ ++E G +A D+V+ D +PN+ G W +
Sbjct: 65 VGVDLLAIEPIDGVTTIKADITAPET---LELIVEALGGKA-DVVICDAAPNLSGNWTLD 120
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
L ++++A L P G F+ KVF+ + L ++ F + + PAASR
Sbjct: 121 HARSIDLSRSALRVAESVLKPGGNFLVKVFQGDTFLDYLSEVRVRFRRAQSHSPAASRKE 180
Query: 191 SAEIYLLGIKYKAP 204
SAE+Y++G + P
Sbjct: 181 SAEMYVVGQGFFIP 194
>gi|320162925|gb|EFW39824.1| cell division protein [Capsaspora owczarzaki ATCC 30864]
Length = 327
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 128/238 (53%), Gaps = 26/238 (10%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQV- 59
MGK K + D YYRLAKE G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 1 MGK-SSKDKRDIYYRLAKEEGWRARSAFKLLQLDEEFQLFLNVRRAVDLCAAPGSWSQVL 59
Query: 60 -----AVQ---RVPVGSL---------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKK 102
AVQ VP+ SL ++ +DL +AP+ G + ++ DITK + ++
Sbjct: 60 SKKLDAVQCPVAVPMESLPAHCQIPRKIVAVDLQAMAPLPGVIQIQGDITK---ESTAQQ 116
Query: 103 VMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRS 162
++ DLV+ DG+P+V G + Q L++ ++ + T L P G FV K+FR
Sbjct: 117 IVAHFEGELADLVVCDGAPDVTGLHDIDEYIQAQLILAALNITTHVLRPDGVFVAKIFRG 176
Query: 163 QDYSSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPR----LLDVKY 216
+D S + LK F V KP +SR++S E +++ Y P P LLD +Y
Sbjct: 177 KDVSLLYSQLKLFFRNVTCSKPRSSRNSSIEAFVVCRGYSPPVGFVPTMANPLLDQQY 234
>gi|302846344|ref|XP_002954709.1| hypothetical protein VOLCADRAFT_102215 [Volvox carteri f.
nagariensis]
gi|300260128|gb|EFJ44350.1| hypothetical protein VOLCADRAFT_102215 [Volvox carteri f.
nagariensis]
Length = 297
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 120/213 (56%), Gaps = 13/213 (6%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D +YR AKE G+R+R+++KL+Q+D F +DLCAAPG W QV
Sbjct: 1 MGK-SSKDKRDIFYRKAKEEGWRARSAYKLLQIDEAFDIFSGVAHAVDLCAAPGSWSQVL 59
Query: 61 VQRV---------PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRA 111
+++ P ++ +DL P+API G + L+ DIT K+V+ +
Sbjct: 60 SRKLYLPAVRSGSPSPPTIVAVDLQPMAPIEGVIQLQGDITS---EVTAKQVISHFDGQP 116
Query: 112 FDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYC 171
DLV+ DG+P+V G + Q L++ ++ + L P GTFV K+FR +D + +
Sbjct: 117 ADLVVCDGAPDVTGLHDLDEYVQAQLLLAALSIVCAVLRPGGTFVAKIFRGKDVALLYSQ 176
Query: 172 LKQLFEKVEVDKPAASRSASAEIYLLGIKYKAP 204
LK LF +V V KP +SR++S E +++G ++ P
Sbjct: 177 LKLLFPEVYVAKPKSSRNSSIEAFVVGRRFDPP 209
>gi|346469259|gb|AEO34474.1| hypothetical protein [Amblyomma maculatum]
Length = 420
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 129/233 (55%), Gaps = 16/233 (6%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE G+R+R+++KL+Q++ +F +DLCAAPG W QV
Sbjct: 1 MGR-SSKDKRDVYYRLAKEEGWRARSAFKLLQINEEFDIFAGVTKAVDLCAAPGSWSQVL 59
Query: 61 VQRV------PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114
+++ P ++ +DL +AP+ G + L+ DIT+ + +K++ DL
Sbjct: 60 SRKLRGNAENPDEVKIVAVDLQAMAPLPGVIQLQGDITE---VSTAQKIISHFEGEKADL 116
Query: 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQ 174
V+ DG+P+V G + Q L++ ++ + T L GT++ K+FR +D + + LK
Sbjct: 117 VVCDGAPDVTGLHDIDEYIQAELLLSALNITTHVLKNGGTYIAKIFRGKDVTLLYAQLKL 176
Query: 175 LFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKV 227
FE V V KP +SR++S E +++ Y P P ++F GS+E KV
Sbjct: 177 FFEHVTVAKPRSSRNSSIESFVVCRHYSPPEGYKP------FMFSGSMEDLKV 223
>gi|351706512|gb|EHB09431.1| Putative ribosomal RNA methyltransferase 1 [Heterocephalus glaber]
Length = 372
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 125/216 (57%), Gaps = 12/216 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE+G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 56 MGRTS-KDKRDVYYRLAKENGWRARSAFKLLQLDEEFQLFQGVTRAVDLCAAPGSWSQVL 114
Query: 61 VQRV----PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEH-GVRAFDLV 115
Q++ P S V+ +DL +AP+ G V ++ DIT+ + K++++ G A DLV
Sbjct: 115 SQKIRGQGP--SHVVAVDLQAMAPLPGVVQIQGDITQ---LSTAKEIIQHFEGCHA-DLV 168
Query: 116 LHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL 175
+ DG+P+V G + Q L++ ++ +AT L P G FV K+FR +D + + L+
Sbjct: 169 VCDGAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLRVF 228
Query: 176 FEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
F V KP +SR++S E + + Y P P L
Sbjct: 229 FSSVLCSKPRSSRNSSIEAFAVCRGYDPPEGFVPDL 264
>gi|328711007|ref|XP_003244421.1| PREDICTED: putative ribosomal RNA methyltransferase C4F10.03c-like
[Acyrthosiphon pisum]
Length = 307
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 125/218 (57%), Gaps = 11/218 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYRLAKE G+R+R+++KL+Q++S+F L V+DLCAAPG W QV
Sbjct: 1 MGK-SSKDKRDIYYRLAKEQGWRARSAFKLIQINSQFKVLDGVKRVVDLCAAPGSWSQVL 59
Query: 61 VQRV------PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEH-GVRAFD 113
+ + ++ +DL +AP+ G V L+ DITK + +++ + G R D
Sbjct: 60 SKALYSDSDDKDDVKIVAVDLQSMAPLPGVVQLKGDITK---ESTANEILAQFDGGRLVD 116
Query: 114 LVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLK 173
LV+ DG+P+V G + Q L++ ++ + T L P GTF+ K+FR +D S ++ L+
Sbjct: 117 LVVFDGAPDVTGLHDLDEYVQAQLLLAALNITTYLLKPGGTFIGKIFRGKDSSLLISQLE 176
Query: 174 QLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
F V V KP +SR++S E +++ + P P +
Sbjct: 177 IFFGDVVVAKPCSSRNSSIESFVVCRDFWLPDGYTPTM 214
>gi|408406026|ref|YP_006864010.1| ribosomal RNA large subunit, methyltransferase E [Candidatus
Nitrososphaera gargensis Ga9.2]
gi|408366622|gb|AFU60352.1| ribosomal RNA large subunit, methyltransferase E [Candidatus
Nitrososphaera gargensis Ga9.2]
Length = 198
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 116/194 (59%), Gaps = 3/194 (1%)
Query: 9 RLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGS 68
R D+Y RLAK+ GYR+R+++KL+QL+S + L+ V+DL APGGW+QVA + V
Sbjct: 7 RRDQYRRLAKDQGYRARSAYKLLQLNSSYRILKKGSKVVDLGCAPGGWLQVATKEVGQAG 66
Query: 69 LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWA 128
V+G+DL P+ P+ GA LE I P ++ +++ G +A D+VL D +PNV G W
Sbjct: 67 KVVGIDLKPVEPVLGATVLEGSIEDPAMLEKIAGILD--GGKA-DVVLSDLAPNVSGVWD 123
Query: 129 QEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASR 188
+ Q +L ++ A Q L G+ V KVF + LK+ F +V + KP+ASR
Sbjct: 124 VDHARQISLSTIALGFARQILRAGGSAVFKVFEGDMLNEFRAELKKSFGRVFLSKPSASR 183
Query: 189 SASAEIYLLGIKYK 202
S+E+Y++ + +K
Sbjct: 184 QESSELYIVCLDFK 197
>gi|282164555|ref|YP_003356940.1| ribosomal RNA large subunit methyltransferase J [Methanocella
paludicola SANAE]
gi|282156869|dbj|BAI61957.1| ribosomal RNA large subunit methyltransferase J [Methanocella
paludicola SANAE]
Length = 254
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 116/188 (61%), Gaps = 7/188 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D YY AK+ GYRSRA++KL ++ KF ++ AV+DL AAPGGW+QVA + + G+ V
Sbjct: 7 DFYYNKAKQMGYRSRAAFKLKFINEKFGLIKKGDAVVDLGAAPGGWLQVA-KEISEGT-V 64
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL I P+ GAV+++ D+T PE +A++ + +E+ + V+ D +PN+ G WA +
Sbjct: 65 IGVDLQRIEPVEGAVTIKGDMTSPETQAKIFEKVEK-----VNAVICDAAPNLSGNWALD 119
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
L ++ +A + LAP G F+ KVF+ Y + + + F +V K ASR
Sbjct: 120 HARSIDLSKTALDVAAKILAPGGNFLVKVFQGDLYQGFVDEVGRRFSRVYTYKSPASRQQ 179
Query: 191 SAEIYLLG 198
SAEIY++G
Sbjct: 180 SAEIYVIG 187
>gi|159475208|ref|XP_001695715.1| tRNA-2'-O-ribose methyltransferase [Chlamydomonas reinhardtii]
gi|158275726|gb|EDP01502.1| tRNA-2'-O-ribose methyltransferase [Chlamydomonas reinhardtii]
Length = 323
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 123/216 (56%), Gaps = 13/216 (6%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D +YR AKE G+R+R+++KL+Q+D F +DLCAAPG W QV
Sbjct: 1 MGK-SSKDKRDIFYRKAKEEGWRARSAYKLLQIDEAFDIFSGVEHAVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGSL---------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRA 111
+++ + +L ++ +DL P+API G V L+ DIT A K+V+ +
Sbjct: 60 SRKLFLPALRAGNPNPPTIVAVDLQPMAPIEGVVQLQGDITS---EATAKQVISHFHGQP 116
Query: 112 FDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYC 171
DLV+ DG+P+V G + Q L++ ++ + L P GTFV K+FR +D + +
Sbjct: 117 ADLVVCDGAPDVTGLHDLDEYVQAQLLLAALSIVCAVLRPGGTFVAKIFRGKDVALLYSQ 176
Query: 172 LKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKI 207
LK LF +V V KP +SR++S E +++ ++ P +
Sbjct: 177 LKMLFPEVYVAKPKSSRNSSIEAFVVCRRFDPPPGL 212
>gi|58040688|ref|YP_192652.1| ribosomal RNA large subunit methyltransferase J [Gluconobacter
oxydans 621H]
gi|81351345|sp|Q5FNQ1.1|RLME_GLUOX RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|58003102|gb|AAW61996.1| Ribosomal RNA large subunit methyltransferase J [Gluconobacter
oxydans 621H]
Length = 268
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 110/192 (57%), Gaps = 6/192 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y A++ G+RSRA++KL+++D +F + ++DL AAPGGW QVAV+R V
Sbjct: 72 DPYVAAARKQGWRSRAAFKLIEIDDRFKLIGEGTRIIDLGAAPGGWTQVAVKR--GAKHV 129
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+GLDL+P+ P+ GA +E D T PE R+K ++ DLV+ D +PN G A +
Sbjct: 130 VGLDLLPVDPVAGAEIIEGDFTDPEMPDRLKDMLGGPA----DLVMSDMAPNTTGHAATD 185
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
M L ++ A Q LA G+F+ KVF+ +L +K F V+ KP ASR
Sbjct: 186 HMRIMGLAEGALDFAFQVLAEGGSFIAKVFQGGSEKDMLALMKTAFSSVKHVKPPASRKE 245
Query: 191 SAEIYLLGIKYK 202
S+E+Y++ ++
Sbjct: 246 SSELYVIATGFR 257
>gi|392343081|ref|XP_001062916.3| PREDICTED: putative ribosomal RNA methyltransferase 1-like [Rattus
norvegicus]
gi|392355517|ref|XP_343772.5| PREDICTED: putative ribosomal RNA methyltransferase 1-like [Rattus
norvegicus]
Length = 326
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 121/213 (56%), Gaps = 6/213 (2%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 1 MGRTS-KDKRDVYYRLAKEKGWRARSAFKLLQLDEEFQLFKGVKRAVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGS--LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
Q+V S V+ +DL +AP+ G + ++ DIT+ + K++++ DLV+ D
Sbjct: 60 SQKVGGQSSGQVVAVDLQAMAPLPGVIQIQGDITQ---LSTAKEIIQHFEGCPADLVVCD 116
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+P+V G + Q L++ ++ +AT L P G FV K+FR +D + + L+ F
Sbjct: 117 GAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLRIFFSS 176
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
V KP +SR++S E + + Y P P L
Sbjct: 177 VLCAKPKSSRNSSIEAFAVCQGYDPPEGFIPDL 209
>gi|301764809|ref|XP_002917816.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like
[Ailuropoda melanoleuca]
Length = 329
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 128/226 (56%), Gaps = 8/226 (3%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE+G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 1 MGRTS-KDKRDVYYRLAKENGWRARSAFKLLQLDEEFHLFQGVTRAVDLCAAPGSWSQVL 59
Query: 61 VQRV-PVGS-LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
Q++ GS V+ +DL +AP+ G + ++ DIT+ + K++++ DLV+ D
Sbjct: 60 SQKIGGQGSGHVVAVDLQAMAPLPGVLQIQGDITQ---LSTAKEIIQHFEGCPADLVVCD 116
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+P+V G + Q L++ ++ +AT L P G FV K+FR +D + + L+ F
Sbjct: 117 GAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLIYSQLRVFFSS 176
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEP 224
V KP +SR++S E + + Y P P L K L S +P
Sbjct: 177 VLCAKPRSSRNSSIEAFAVCQGYDPPEGFLPDL--TKPLLDHSYDP 220
>gi|350427390|ref|XP_003494742.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like [Bombus
impatiens]
Length = 369
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 123/225 (54%), Gaps = 16/225 (7%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+Q+D++ L + +DLCAAPG W QV
Sbjct: 1 MGKT-SKDKRDIYYRRAKEEGWRARSAFKLLQIDNECHILDGVNKAVDLCAAPGSWSQVL 59
Query: 61 VQRV------------PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHG 108
+R+ ++ +DL +API G + ++ DIT K+++
Sbjct: 60 SRRLNENYKKALETGNATPPKIVAVDLQAMAPIEGVIQIQGDITNIN---TAKQIISHFD 116
Query: 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSV 168
DLV+ DG+P+V G + Q+ L++ ++ + T L GTFV K+FR++D + +
Sbjct: 117 NEQADLVVCDGAPDVTGLHDMDIYIQSQLLLAALNITTHILRKGGTFVAKIFRAKDVTLL 176
Query: 169 LYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLD 213
LK F V KP++SR++S E +++ Y P +P +L+
Sbjct: 177 YAQLKIFFPYVYCTKPSSSRNSSIEAFVVCKDYSPPEGYEPHMLN 221
>gi|57111745|ref|XP_538022.1| PREDICTED: putative ribosomal RNA methyltransferase 1 isoform 1
[Canis lupus familiaris]
Length = 329
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 128/226 (56%), Gaps = 8/226 (3%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE+G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 1 MGRTS-KDKRDVYYRLAKENGWRARSAFKLLQLDEEFHLFQGVTRAVDLCAAPGSWSQVL 59
Query: 61 VQRV-PVGS-LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
Q++ GS V+ +DL +AP+ G + ++ DIT+ + K++++ DLV+ D
Sbjct: 60 SQKIGGQGSGHVVAVDLQAMAPLPGVLQIQGDITQ---LSTAKEIIQHFEGCPADLVVCD 116
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+P+V G + Q L++ ++ +AT L P G FV K+FR +D + + L+ F
Sbjct: 117 GAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLIYSQLRVFFSN 176
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEP 224
V KP +SR++S E + + Y P P L K L S +P
Sbjct: 177 VLCAKPRSSRNSSIEAFAVCQGYDPPEGFLPDL--TKPLLDHSYDP 220
>gi|291407431|ref|XP_002719910.1| PREDICTED: FtsJ homolog 1 [Oryctolagus cuniculus]
Length = 331
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 122/213 (57%), Gaps = 6/213 (2%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE+G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 1 MGRTS-KDKRDVYYRLAKENGWRARSAFKLLQLDEEFQLFKGVTRAVDLCAAPGSWSQVL 59
Query: 61 VQRV-PVGS-LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
Q++ GS V+ +DL +AP+ G ++ DIT+ + K++++ DLV+ D
Sbjct: 60 SQKIGGQGSGQVVAVDLQAMAPLPGVTQIQGDITQ---LSTAKEIIQHFEGCPADLVVCD 116
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+P+V G + Q L++ ++ +AT L P G FV K+FR +D + + L+ F
Sbjct: 117 GAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLRIFFSS 176
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
V KP +SR++S E + + Y P P L
Sbjct: 177 VLCAKPKSSRNSSIEAFAVCQGYDPPEGFKPDL 209
>gi|432950609|ref|XP_004084525.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like [Oryzias
latipes]
Length = 310
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 127/225 (56%), Gaps = 13/225 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE G+R+R+++KL+QLD +F+ +DLCAAPG W QV
Sbjct: 1 MGR-SSKDKRDIYYRLAKEEGWRARSAFKLLQLDQEFNLFTGVSRAVDLCAAPGSWSQVL 59
Query: 61 VQRV-----PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV 115
+++ ++ +DL +AP+ G ++ DITK + ++++ +A DLV
Sbjct: 60 SRKLRGDEGAKEVKIVAVDLQAMAPLPGVTQIQGDITK---VSTAQEIIRHFEGQAADLV 116
Query: 116 LHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL 175
+ DG+P+V G + Q L++ ++ + T L P GTFV K+FR +D + + LK
Sbjct: 117 VCDGAPDVTGLHDVDEYIQAQLLLAALNITTHVLKPGGTFVAKIFRGKDVTLLYSQLKIF 176
Query: 176 FEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPR----LLDVKY 216
F +V KP +SR++S E +++ +Y PA P LLD Y
Sbjct: 177 FSRVTCAKPRSSRNSSIESFVVCQRYSPPACYIPNMSNPLLDHCY 221
>gi|322796151|gb|EFZ18727.1| hypothetical protein SINV_05439 [Solenopsis invicta]
Length = 359
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 124/225 (55%), Gaps = 16/225 (7%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+Q+DS+ +DLCAAPG W QV
Sbjct: 1 MGKT-SKDKRDIYYRKAKEEGWRARSAFKLLQIDSECHIFDGVSKAVDLCAAPGSWSQVL 59
Query: 61 VQRV--------PVGSL----VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHG 108
+++ GS ++ +DL +AP+ G + L+ DIT K+++
Sbjct: 60 ARKLKENYEKASEKGSASPPKIVAVDLQAMAPLEGVIQLQGDITNTN---TAKEIIAHFD 116
Query: 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSV 168
DLV+ DG+P+V G + Q+ L++ ++ +AT L P GTFV K+FR++D + +
Sbjct: 117 NTRADLVVCDGAPDVTGLHDMDIFIQSQLLLAALNIATHILRPGGTFVAKIFRAKDVTFL 176
Query: 169 LYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLD 213
L+ F V KP++SR++S E +++ Y P P +L+
Sbjct: 177 YAQLRIFFPYVYCTKPSSSRNSSIEAFVVCKDYSPPESYTPNMLN 221
>gi|258542575|ref|YP_003188008.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-01]
gi|384042496|ref|YP_005481240.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-12]
gi|384051013|ref|YP_005478076.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-03]
gi|384054121|ref|YP_005487215.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-07]
gi|384057355|ref|YP_005490022.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-22]
gi|384059996|ref|YP_005499124.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-26]
gi|384063288|ref|YP_005483930.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-32]
gi|384119298|ref|YP_005501922.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-01-42C]
gi|421850363|ref|ZP_16283324.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus NBRC 101655]
gi|421854034|ref|ZP_16286672.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus subsp. pasteurianus LMG 1262 =
NBRC 106471]
gi|256633653|dbj|BAH99628.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-01]
gi|256636712|dbj|BAI02681.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-03]
gi|256639765|dbj|BAI05727.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-07]
gi|256642821|dbj|BAI08776.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-22]
gi|256645876|dbj|BAI11824.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-26]
gi|256648929|dbj|BAI14870.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-32]
gi|256651916|dbj|BAI17850.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654973|dbj|BAI20900.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-12]
gi|371458800|dbj|GAB28527.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus NBRC 101655]
gi|371477696|dbj|GAB31875.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus subsp. pasteurianus LMG 1262 =
NBRC 106471]
Length = 263
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 118/198 (59%), Gaps = 7/198 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y + A + G+RSRA++KL++LD +F +R ++DL AAPGGW QV V+R S V
Sbjct: 69 DPYVQAAHKQGWRSRAAFKLIELDDRFHLIRPGMRIVDLGAAPGGWTQVLVKR--GASQV 126
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL+P+ P+ GA +E D T PE AR+ ++ G +A DLV+ D +PN G +
Sbjct: 127 VGVDLLPVEPVAGAEIIEGDFTDPEMDARLISML---GGKA-DLVVSDMAPNTTGHAPTD 182
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ L +++ A LA G FV KVF+ ++L +KQ F +V KP ASR
Sbjct: 183 HVRIIGLAEEALHFAFDILAEGGGFVAKVFQGGSEKAMLNTMKQAFTQVRHAKPPASRKD 242
Query: 191 SAEIYLLGIKYKAPAKID 208
S+E+Y++ ++ P +I+
Sbjct: 243 SSELYVVATGFR-PDRIN 259
>gi|453331116|dbj|GAC86695.1| ribosomal RNA large subunit methyltransferase J [Gluconobacter
thailandicus NBRC 3255]
Length = 266
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 111/192 (57%), Gaps = 6/192 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y A++ G+RSRA++KL+++D +F ++ V+DL AAPGGW QVAV+R +
Sbjct: 73 DPYVAAARKQGWRSRAAFKLIEIDDRFHIIKPGARVIDLGAAPGGWSQVAVKR--GAGHI 130
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
G+DL+P+ P+ GA +E D T PE R+K+++ DLV+ D +PN G A +
Sbjct: 131 AGVDLLPVDPVSGAEIIEGDFTDPEMPDRLKEILGGPA----DLVMSDMAPNTTGHAATD 186
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
M L ++ A Q LA G+FV KVF+ +L +K F V+ KP ASR
Sbjct: 187 HMRIMGLAEGALDFAMQVLAEGGSFVAKVFQGGSEKQMLDSMKLAFASVKHVKPPASRKE 246
Query: 191 SAEIYLLGIKYK 202
S+E+Y++ ++
Sbjct: 247 SSELYVIATGFR 258
>gi|443732827|gb|ELU17391.1| hypothetical protein CAPTEDRAFT_159848 [Capitella teleta]
Length = 315
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 126/226 (55%), Gaps = 15/226 (6%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE G+R+R+++KL+Q+D +F ++ V+DLCAAPG W QV
Sbjct: 1 MGR-SSKDKRDVYYRLAKEEGWRARSAFKLLQIDEEFKIFQNVKKVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVG-----SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVME-EHGVRAFDL 114
Q++ + ++ +DL +API G + L+ DITK + E +H DL
Sbjct: 60 SQKLRSDGDDSEAKIVAVDLQAMAPITGVIQLQGDITKVSTAEDIISHFEGDHA----DL 115
Query: 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQ 174
V+ DG+P+V G + Q L++ ++ + T L GTFV K+FR +D S + L+
Sbjct: 116 VVCDGAPDVTGLHDIDEYIQAQLLLAALNITTHVLKKGGTFVAKIFRGKDVSLLYSQLRI 175
Query: 175 LFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPR----LLDVKY 216
F V + KP +SR++S E +++ KY P P LLD Y
Sbjct: 176 FFPSVTIAKPRSSRNSSIEAFVVCEKYSPPDGYVPNMCNPLLDQHY 221
>gi|410943380|ref|ZP_11375121.1| 23S rRNA methyltransferase J [Gluconobacter frateurii NBRC 101659]
Length = 266
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 111/192 (57%), Gaps = 6/192 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y A++ G+RSRA++KL+++D +F ++ V+DL AAPGGW QVAV+R +
Sbjct: 73 DPYVAAARKQGWRSRAAFKLIEIDDRFHIIKPGARVIDLGAAPGGWSQVAVKR--GAGHI 130
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
G+DL+P+ P+ GA +E D T PE R+K+++ DLV+ D +PN G A +
Sbjct: 131 AGVDLLPVDPVSGAEIIEGDFTDPEMPDRLKEILGGPA----DLVMSDMAPNTTGHAATD 186
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
M L ++ A Q LA G+FV KVF+ +L +K F V+ KP ASR
Sbjct: 187 HMRIMGLAEGALDFAMQVLAEGGSFVAKVFQGGSEKQMLDSMKLAFASVKHVKPPASRKE 246
Query: 191 SAEIYLLGIKYK 202
S+E+Y++ ++
Sbjct: 247 SSELYVIATGFR 258
>gi|123446753|ref|XP_001312124.1| cell division protein [Trichomonas vaginalis G3]
gi|121893960|gb|EAX99194.1| cell division protein, putative [Trichomonas vaginalis G3]
Length = 244
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 113/204 (55%), Gaps = 7/204 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQR---VPVG 67
D +YR AK+ G+R+R+++KL+Q+ F + V+DLCAAPG W QV QR VP
Sbjct: 9 DTFYRAAKQEGWRARSAFKLIQVADHFRLFDNVTRVVDLCAAPGSWSQVCAQRLSKVP-N 67
Query: 68 SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAW 127
S ++ +DL P+API G + + DIT E +V M +G +A DLV+ DG+P+V G
Sbjct: 68 SAIVAVDLQPMAPIPGVIQIRGDITSKETAQQVIDAM--NGKKA-DLVISDGAPDVTGLH 124
Query: 128 AQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAAS 187
+ Q+ LV + +A L GTF+ K+F +D + L FE V KP AS
Sbjct: 125 DLDEYMQSQLVFSAFNIACFMLREGGTFMAKIFTGRDIQDLYSSLSPFFETVTAMKPRAS 184
Query: 188 RSASAEIYLLGIKYKAPAKIDPRL 211
R AS E +++ +K P P L
Sbjct: 185 RVASLESFVVCQGFKLPEGYTPIL 208
>gi|431893580|gb|ELK03443.1| Putative ribosomal RNA methyltransferase 1 [Pteropus alecto]
Length = 332
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 128/226 (56%), Gaps = 8/226 (3%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE+G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 1 MGRTS-KDKRDVYYRLAKENGWRARSAFKLLQLDEEFQLFQGVTRAVDLCAAPGSWSQVL 59
Query: 61 VQRV-PVGS-LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
Q++ GS V+ +DL +API G + ++ DIT+ + K++++ DLV+ D
Sbjct: 60 SQKIGGQGSGHVVAVDLQAMAPIPGVLQIQGDITQ---LSTAKEIIQHFEGCPADLVVCD 116
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+P+V G + Q L++ ++ +AT L P G FV K+FR +D + + L+ F
Sbjct: 117 GAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLIYSQLRVFFSS 176
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEP 224
V KP +SR++S E + + Y P P L K L S +P
Sbjct: 177 VLCAKPRSSRNSSIEAFAVCQGYDPPQGFLPDL--TKPLLDHSYDP 220
>gi|402910070|ref|XP_003917714.1| PREDICTED: putative ribosomal RNA methyltransferase 1 [Papio
anubis]
Length = 329
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 123/213 (57%), Gaps = 6/213 (2%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE+G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 1 MGRTS-KDKRDVYYRLAKENGWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVL 59
Query: 61 VQRV-PVGS-LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
Q++ GS V+ +DL +AP+ G V ++ DIT+ + K++++ DLV+ D
Sbjct: 60 SQKIGGQGSGHVVAVDLQAMAPLPGVVQIQGDITQ---LSTAKEIIQHFKGCPADLVVCD 116
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+P+V G + Q L++ ++ +AT L P G FV K+FR +D + + L+ F
Sbjct: 117 GAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLRVFFSS 176
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
V KP +SR++S E + + Y P P L
Sbjct: 177 VLCAKPRSSRNSSIEAFAVCQGYDPPEGFIPDL 209
>gi|432110134|gb|ELK33911.1| Putative ribosomal RNA methyltransferase 1 [Myotis davidii]
Length = 321
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 128/227 (56%), Gaps = 9/227 (3%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE+G+R+R+++KL+QL+ +F + +DLCAAPG W QV
Sbjct: 1 MGRTS-KDKRDVYYRLAKENGWRARSAFKLLQLNEEFQLFQGVTRAVDLCAAPGSWSQVL 59
Query: 61 VQRV--PVGS-LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117
Q++ P GS V+ +DL +AP+ G + ++ DIT+ + K+++ DLV+
Sbjct: 60 SQKIGSPQGSGHVVAVDLQAMAPLPGVLQIQGDITQ---LSTAKEIIRHFEGCPADLVVC 116
Query: 118 DGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFE 177
DG+P+V G + Q L++ ++ +AT L P G FV K+FR +D + + L+ F
Sbjct: 117 DGAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLRVFFS 176
Query: 178 KVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEP 224
V KP +SR++S E + + Y P P L K L S +P
Sbjct: 177 NVLCAKPRSSRNSSIEAFAVCQGYDPPEGFLPDL--TKPLLDHSYDP 221
>gi|355757329|gb|EHH60854.1| Putative ribosomal RNA methyltransferase 1 [Macaca fascicularis]
Length = 329
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 123/213 (57%), Gaps = 6/213 (2%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE+G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 1 MGRTS-KDKRDVYYRLAKENGWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVL 59
Query: 61 VQRV-PVGS-LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
Q++ GS V+ +DL +AP+ G V ++ DIT+ + K++++ DLV+ D
Sbjct: 60 SQKIGGQGSGHVVAVDLQAMAPLPGVVQIQGDITQ---LSTAKEIIQHFKGCPADLVVCD 116
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+P+V G + Q L++ ++ +AT L P G FV K+FR +D + + L+ F
Sbjct: 117 GAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLRVFFSS 176
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
V KP +SR++S E + + Y P P L
Sbjct: 177 VLCAKPRSSRNSSIEAFAVCQGYDPPEGFIPDL 209
>gi|386781808|ref|NP_001247931.1| putative ribosomal RNA methyltransferase 1 [Macaca mulatta]
gi|355704770|gb|EHH30695.1| Putative ribosomal RNA methyltransferase 1 [Macaca mulatta]
gi|380811278|gb|AFE77514.1| putative ribosomal RNA methyltransferase 1 isoform a [Macaca
mulatta]
gi|383417197|gb|AFH31812.1| putative ribosomal RNA methyltransferase 1 isoform a [Macaca
mulatta]
gi|384946194|gb|AFI36702.1| putative ribosomal RNA methyltransferase 1 isoform a [Macaca
mulatta]
Length = 329
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 123/213 (57%), Gaps = 6/213 (2%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE+G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 1 MGRTS-KDKRDVYYRLAKENGWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVL 59
Query: 61 VQRV-PVGS-LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
Q++ GS V+ +DL +AP+ G V ++ DIT+ + K++++ DLV+ D
Sbjct: 60 SQKIGGQGSGHVVAVDLQAMAPLPGVVQIQGDITQ---LSTAKEIIQHFKGCPADLVVCD 116
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+P+V G + Q L++ ++ +AT L P G FV K+FR +D + + L+ F
Sbjct: 117 GAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLRVFFSS 176
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
V KP +SR++S E + + Y P P L
Sbjct: 177 VLCAKPRSSRNSSIEAFAVCQGYDPPEGFIPDL 209
>gi|403357673|gb|EJY78465.1| Putative ribosomal RNA methyltransferase 1 [Oxytricha trifallax]
Length = 319
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 120/205 (58%), Gaps = 11/205 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K K + D YYR AKE GYR+R+++KL+Q+D +F+ V+DLCAAPG W QV
Sbjct: 1 MGK-KAKDKRDIYYRKAKEEGYRARSAYKLLQIDEEFNIFEGVDRVVDLCAAPGSWSQVI 59
Query: 61 VQRVPVGSL-------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFD 113
+R+ L ++ +DL +A I G ++ DIT+ + +++V E +
Sbjct: 60 SKRLKEKGLDITNTKRLISVDLFEMAAIEGCTIIKGDITREKTVQEIQEVFEGEPSQ--- 116
Query: 114 LVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLK 173
LV+ DG+P++ G + Q+ LV+ ++ +A + L+P GTFV KVFR +D + + +K
Sbjct: 117 LVVSDGAPDILGDHDFDQFVQHQLVLAALNIAIRLLSPGGTFVAKVFRGKDINLLHRQIK 176
Query: 174 QLFEKVEVDKPAASRSASAEIYLLG 198
+F V KP SR++S E +++
Sbjct: 177 MVFSDVYCSKPKCSRNSSIEGFVVA 201
>gi|91773171|ref|YP_565863.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcoides
burtonii DSM 6242]
gi|121689250|sp|Q12WR3.1|RLME_METBU RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|91712186|gb|ABE52113.1| ribosomal RNA large subunit methyltransferase [Methanococcoides
burtonii DSM 6242]
Length = 267
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 119/206 (57%), Gaps = 6/206 (2%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+ R D YY AK+ GYRSRA++KL Q++ K ++ ++DL AAPGGW++VA +++
Sbjct: 3 RDRRDTYYWRAKDEGYRSRAAYKLFQINEKHEVIKEDDTIVDLGAAPGGWLEVA-KKISG 61
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
G +V G+DL I I G +++ DIT E +KK++E G D+V+ D +PN+ G
Sbjct: 62 GKIV-GVDLRRIKEIEGVETIKGDITSDET---IKKIIELVGEGGADVVICDAAPNLSGN 117
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
W+ + L +++ A + L PKG F+ KVF+ + + +++ F P A
Sbjct: 118 WSLDHARSIDLTTSALECAKKILKPKGHFIVKVFQGDMFKEYMDKVRESFTYTRAFSPKA 177
Query: 187 SRSASAEIYLLGIK-YKAPAKIDPRL 211
SR SAEIY++G K AP KID +
Sbjct: 178 SRPESAEIYVIGKKLLTAPLKIDDKF 203
>gi|297618952|ref|YP_003707057.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcus voltae A3]
gi|297377929|gb|ADI36084.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcus voltae A3]
Length = 298
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 112/195 (57%), Gaps = 6/195 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D YY LAK++ YRSRA++KL QL+ KF+F++ + V+DL APGGW+Q A + V V
Sbjct: 15 DFYYNLAKKNQYRSRATYKLFQLNEKFNFIKEDNVVIDLGCAPGGWLQSAREIVGEDGFV 74
Query: 71 LGLDLVPIAPIR--GAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWA 128
+G+DL + P++ V+++ D+TK E V K + R D+++ D SPNV G W
Sbjct: 75 VGIDLQKVKPLKYDNVVAIKGDMTKEE----VLKEALSYLPRNPDVIICDASPNVSGVWD 130
Query: 129 QEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASR 188
+ L ++ +T+ L G FV KVF+ ++ + F+KV KP ASR
Sbjct: 131 VDHTCSLILTTMALMTSTRVLKRGGNFVVKVFQGDLFNKYTDLVGTYFDKVITTKPKASR 190
Query: 189 SASAEIYLLGIKYKA 203
SAE+Y++G ++
Sbjct: 191 GESAEVYVIGRRFNG 205
>gi|7110661|ref|NP_036412.1| putative ribosomal RNA methyltransferase 1 isoform a [Homo sapiens]
gi|397471349|ref|XP_003807258.1| PREDICTED: putative ribosomal RNA methyltransferase 1 isoform 1
[Pan paniscus]
gi|12643879|sp|Q9UET6.2|RRMJ1_HUMAN RecName: Full=Putative ribosomal RNA methyltransferase 1; AltName:
Full=Protein ftsJ homolog 1; AltName: Full=rRNA
(uridine-2'-O-)-methyltransferase
gi|3334739|emb|CAA06749.1| JM23 [Homo sapiens]
gi|23270836|gb|AAH23584.1| FtsJ homolog 1 (E. coli) [Homo sapiens]
gi|119571167|gb|EAW50782.1| FtsJ homolog 1 (E. coli), isoform CRA_a [Homo sapiens]
gi|119571168|gb|EAW50783.1| FtsJ homolog 1 (E. coli), isoform CRA_a [Homo sapiens]
gi|189054765|dbj|BAG37587.1| unnamed protein product [Homo sapiens]
gi|307686265|dbj|BAJ21063.1| FtsJ homolog 1 [synthetic construct]
gi|312151394|gb|ADQ32209.1| FtsJ homolog 1 (E. coli) [synthetic construct]
gi|410222314|gb|JAA08376.1| FtsJ homolog 1 [Pan troglodytes]
gi|410222318|gb|JAA08378.1| FtsJ homolog 1 [Pan troglodytes]
gi|410252886|gb|JAA14410.1| FtsJ homolog 1 [Pan troglodytes]
gi|410252890|gb|JAA14412.1| FtsJ homolog 1 [Pan troglodytes]
gi|410290770|gb|JAA23985.1| FtsJ homolog 1 [Pan troglodytes]
gi|410290774|gb|JAA23987.1| FtsJ homolog 1 [Pan troglodytes]
gi|410350185|gb|JAA41696.1| FtsJ homolog 1 [Pan troglodytes]
Length = 329
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 123/213 (57%), Gaps = 6/213 (2%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE+G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 1 MGRTS-KDKRDVYYRLAKENGWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVL 59
Query: 61 VQRV-PVGS-LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
Q++ GS V+ +DL +AP+ G V ++ DIT+ + K++++ DLV+ D
Sbjct: 60 SQKIGGQGSGHVVAVDLQAMAPLPGVVQIQGDITQ---LSTAKEIIQHFKGCPADLVVCD 116
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+P+V G + Q L++ ++ +AT L P G FV K+FR +D + + L+ F
Sbjct: 117 GAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLQVFFSS 176
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
V KP +SR++S E + + Y P P L
Sbjct: 177 VLCAKPRSSRNSSIEAFAVCQGYDPPEGFIPDL 209
>gi|426395794|ref|XP_004064145.1| PREDICTED: putative ribosomal RNA methyltransferase 1 [Gorilla
gorilla gorilla]
Length = 329
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 123/213 (57%), Gaps = 6/213 (2%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE+G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 1 MGRTS-KDKRDVYYRLAKENGWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVL 59
Query: 61 VQRV-PVGS-LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
Q++ GS V+ +DL +AP+ G V ++ DIT+ + K++++ DLV+ D
Sbjct: 60 SQKIGGQGSGHVVAVDLQAMAPLPGVVQIQGDITQ---LSTAKEIIQHFKGCPADLVVCD 116
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+P+V G + Q L++ ++ +AT L P G FV K+FR +D + + L+ F
Sbjct: 117 GAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLQVFFSS 176
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
V KP +SR++S E + + Y P P L
Sbjct: 177 VLCAKPRSSRNSSIEAFAVCQGYDPPEGFIPDL 209
>gi|426257095|ref|XP_004022170.1| PREDICTED: putative ribosomal RNA methyltransferase 1 [Ovis aries]
Length = 329
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 128/226 (56%), Gaps = 8/226 (3%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE+G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 1 MGRTS-KDKRDVYYRLAKENGWRARSAFKLLQLDEEFQLFQGVTRAVDLCAAPGSWSQVL 59
Query: 61 VQRV-PVGS-LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
Q++ GS V+ +DL +AP+ G + ++ DIT+ + K++++ DLV+ D
Sbjct: 60 SQKIGGQGSGHVVAVDLQAMAPLPGVLQIQGDITQ---LSTAKEIIQHFEGCPADLVVCD 116
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+P+V G + Q L++ ++ +AT L P G FV K+FR +D + + L+ F
Sbjct: 117 GAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLIYSQLRVFFSS 176
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEP 224
V KP +SR++S E + + Y P P L K L S +P
Sbjct: 177 VLCAKPRSSRNSSIEAFAVCKGYDPPEGFLPDL--TKPLLDHSYDP 220
>gi|340623858|ref|YP_004742311.1| ribosomal RNA large subunit methyltransferase E [Methanococcus
maripaludis X1]
gi|339904126|gb|AEK19568.1| ribosomal RNA large subunit methyltransferase E [Methanococcus
maripaludis X1]
Length = 258
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 109/193 (56%), Gaps = 6/193 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D YY LAK YRSRA++KL QL+ KF+ ++ + V+DL APGGW+Q A V +
Sbjct: 15 DHYYNLAKRRNYRSRATYKLFQLNEKFNLIKERNVVVDLGCAPGGWLQAARDIVGDNGFI 74
Query: 71 LGLDLVPIAPIR--GAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWA 128
+G+DL + P+ ++++ D+TK E + K ++ E D+++ D SPN+ G W
Sbjct: 75 VGIDLQTVKPLPHDNVIAIKGDMTKEEILKQAKDLLPEKP----DVIICDASPNISGVWD 130
Query: 129 QEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASR 188
+ + L ++ AT+ L G FV KVF+ + + + + F+K KP ASR
Sbjct: 131 VDHVRSLELTTMALMTATKMLKKGGNFVVKVFQGDLFEKYVQLVSEYFDKAFTTKPRASR 190
Query: 189 SASAEIYLLGIKY 201
SAE+Y++G ++
Sbjct: 191 DESAEVYVIGKRF 203
>gi|193785818|dbj|BAG51253.1| unnamed protein product [Homo sapiens]
Length = 327
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 131/234 (55%), Gaps = 10/234 (4%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE+G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 1 MGRTS-KDKRDVYYRLAKENGWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVL 59
Query: 61 VQRV-PVGS-LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
+++ GS V+ +DL +AP+ G V ++ DIT+ + K++++ DLV+ D
Sbjct: 60 SRKIGGQGSGHVVAVDLQAMAPLPGVVQIQGDITQ---LSTAKEIIQHFKGCPADLVVCD 116
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+P+V G + Q L++ ++ +AT L P G FV K+FR +D + + L+ F
Sbjct: 117 GAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLQVFFSS 176
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDP----RLLDVKYLFQGSVEPRKVV 228
V KP +SR++S E + + Y P P LLD Y F P +++
Sbjct: 177 VLCAKPRSSRNSSIEAFAVCQGYDPPEGFIPDLSKPLLDHSYDFNQLDGPTRII 230
>gi|430812992|emb|CCJ29630.1| unnamed protein product [Pneumocystis jirovecii]
Length = 278
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 119/216 (55%), Gaps = 15/216 (6%)
Query: 15 RLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV------PVGS 68
RLAKE G+R+R+++KL+QLD +F L+ V+DLCAAPG W QV +++
Sbjct: 5 RLAKEEGWRARSAFKLIQLDEEFGLLKDVKRVIDLCAAPGSWSQVLSKKLIEDNDSCENI 64
Query: 69 LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWA 128
++ +DL P+ PI+G +L+ DIT P+ +R ++E G + DLV+ D +V G
Sbjct: 65 TIVAVDLQPMTPIKGVKTLQADITHPDTLSR---ILEIFGNKHADLVICD---DVTGLHD 118
Query: 129 QEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASR 188
+ Q L+ ++ + T L P G FV K+FR +D S + LK FEKV KP +SR
Sbjct: 119 LDEYIQEQLLFSALNMTTCILRPGGNFVAKIFRGRDISFLYAQLKCFFEKVTCAKPLSSR 178
Query: 189 SASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEP 224
+S E Y++ + P P D+ FQ +P
Sbjct: 179 GSSIEAYVVCENFSLPEGYKP---DISAPFQEKNDP 211
>gi|328867319|gb|EGG15702.1| rRNA methyltransferase [Dictyostelium fasciculatum]
Length = 254
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 122/219 (55%), Gaps = 11/219 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE GYR+R+++KL+Q+D ++ V+DLCAAPG W Q A
Sbjct: 1 MGK-SSKDKRDIYYRKAKEEGYRARSAFKLLQIDDDYNIFEGVKRVVDLCAAPGSWSQ-A 58
Query: 61 VQRVPVGS------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114
+ R G ++ +D+ +AP++G V + DITK E + + G +A DL
Sbjct: 59 LSRKIYGDGSDPDVKIVAVDIQEMAPLKGVVQIRGDITKLETALEITNQFD--GKQA-DL 115
Query: 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQ 174
V+ DG+P+V G + Q+ L++ ++ + T L P G FV K+F+ D + + L+
Sbjct: 116 VVSDGAPDVTGLHDIDFYGQSQLILAALNITTHILRPGGCFVAKMFKGNDMTLMYNQLRV 175
Query: 175 LFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLD 213
F V+ KP +SR++S E ++L Y P P ++D
Sbjct: 176 FFRSVQFVKPKSSRNSSLEAFVLCQHYYPPTDFKPTMID 214
>gi|355689322|gb|AER98795.1| FtsJ-like protein 1 [Mustela putorius furo]
Length = 329
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 123/213 (57%), Gaps = 6/213 (2%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE+G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 1 MGRTS-KDKRDVYYRLAKENGWRARSAFKLLQLDEEFHLFQGVTRAVDLCAAPGSWSQVL 59
Query: 61 VQRV-PVGS-LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
Q++ GS V+ +DL +AP+ G + ++ DIT+ + K++++ DLV+ D
Sbjct: 60 SQKIGGQGSGHVVAVDLQAMAPLPGVLQIQGDITQ---LSTAKEIIQHFEGCPADLVVCD 116
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+P+V G + Q L++ ++ +AT L P G FV K+FR +D + + L+ F
Sbjct: 117 GAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLIYSQLRVFFSS 176
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
V KP +SR++S E + + Y P P L
Sbjct: 177 VLCAKPRSSRNSSIEAFAVCQGYDPPEGFLPDL 209
>gi|118150968|ref|NP_001071402.1| putative ribosomal RNA methyltransferase 1 [Bos taurus]
gi|117306288|gb|AAI26604.1| FtsJ homolog 1 (E. coli) [Bos taurus]
gi|296470729|tpg|DAA12844.1| TPA: FtsJ homolog 1 [Bos taurus]
Length = 307
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 128/226 (56%), Gaps = 8/226 (3%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE+G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 1 MGRTS-KDKRDVYYRLAKENGWRARSAFKLLQLDEEFQLFQGVTRAVDLCAAPGSWSQVL 59
Query: 61 VQRV-PVGS-LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
Q++ GS V+ +DL +AP+ G + ++ DIT+ + K++++ DLV+ D
Sbjct: 60 SQKIGGQGSGHVVAVDLQAMAPLPGVLQIQGDITQ---LSTAKEIIQHFEGCPADLVVCD 116
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+P+V G + Q L++ ++ +AT L P G FV K+FR +D + + L+ F
Sbjct: 117 GAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLIYSQLRVFFSS 176
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEP 224
V KP +SR++S E + + Y P P L K L S +P
Sbjct: 177 VLCAKPRSSRNSSIEAFAVCKGYDPPEGFLPDL--TKPLLDHSYDP 220
>gi|321474858|gb|EFX85822.1| hypothetical protein DAPPUDRAFT_309098 [Daphnia pulex]
Length = 302
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 127/225 (56%), Gaps = 13/225 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYRLAKE G+R+R+++KL+Q+D +F +DLCAAPG W QV
Sbjct: 1 MGKT-SKDKRDVYYRLAKEEGWRARSAFKLLQIDEEFRIFEGVKNAVDLCAAPGSWSQVL 59
Query: 61 VQRV-----PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV 115
+++ V + ++ +DL +AP+ G + ++ DIT+ ++ E G +A DLV
Sbjct: 60 TRKLHNKDENVSAKIVAVDLQAMAPLPGVIQIQGDITQLSTAEKIISYFE--GEKA-DLV 116
Query: 116 LHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL 175
+ DG+P+V G + Q L++ ++ + T L G FV K+FR +D + + L+
Sbjct: 117 VCDGAPDVTGLHDIDEYVQAQLLLAALNITTHVLKDGGIFVAKIFRGRDITLLYSQLRIF 176
Query: 176 FEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPR----LLDVKY 216
F KV V KP +SR++S E +++ Y P+ P LLD +Y
Sbjct: 177 FPKVTVAKPMSSRNSSIEAFVVCQNYSPPSGYIPNMSNPLLDHQY 221
>gi|206598233|gb|ACI16035.1| ribosomal RNA methyltransferase [Bodo saltans]
Length = 321
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 121/215 (56%), Gaps = 6/215 (2%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYR AKE GYR+R+++KL+Q+D + + +DLCAAPG W QV
Sbjct: 1 MGRAS-KDKRDMYYRKAKEEGYRARSAYKLLQIDEELDVFTNVTKAVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGS--LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
++P ++ +DL +API G V ++ DIT +V+ G +LV+ D
Sbjct: 60 TAKLPQTPERRIVAVDLQEMAPIAGVVCIQGDITT---EKTANEVIGRLGDVKAELVICD 116
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+P+V G + Q+ L++ ++ + T LAP GTFVTK+FR + ++ + FE
Sbjct: 117 GAPDVTGLHELDEYVQHQLLLAALNITTFVLAPGGTFVTKMFRGPNTPFLVAKSEMFFEN 176
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLD 213
V + KP +SR+AS E +++ ++ P ++D
Sbjct: 177 VMIMKPKSSRNASMEAFMVCQNFRPPIGFVASMVD 211
>gi|347759875|ref|YP_004867436.1| ribosomal RNA large subunit 23S methyltransferase RrmJ
[Gluconacetobacter xylinus NBRC 3288]
gi|347578845|dbj|BAK83066.1| ribosomal RNA large subunit 23S methyltransferase RrmJ
[Gluconacetobacter xylinus NBRC 3288]
Length = 254
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 119/208 (57%), Gaps = 12/208 (5%)
Query: 2 GKVKGKHRL------DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGG 55
G+ +HR D Y + A++ G+RSRA++KL++LD +F ++ V+DL AAPGG
Sbjct: 47 GRTTAQHRWLQRQLNDPYVQAAQKQGWRSRAAFKLIELDDRFHLIQPGTRVVDLGAAPGG 106
Query: 56 WMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV 115
W QVAV+R + V+G+DL+P+ P+ GA +E D P R+ ++ G +A DLV
Sbjct: 107 WTQVAVKR--GAAEVVGVDLLPVDPVPGATVIEGDFNDPAMPGRLTDLL---GGKA-DLV 160
Query: 116 LHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL 175
+ D +PN G + + L ++ AT+ LA G FV KVF+ +L LK+L
Sbjct: 161 MSDMAPNTTGHAPTDHLRIIGLAELALDFATRILAQDGAFVAKVFQGGSEKQMLAELKRL 220
Query: 176 FEKVEVDKPAASRSASAEIYLLGIKYKA 203
F +V KP ASR S+E+Y++ ++
Sbjct: 221 FTQVRHAKPPASRKESSELYVVATGFRG 248
>gi|435850786|ref|YP_007312372.1| 23S rRNA methylase [Methanomethylovorans hollandica DSM 15978]
gi|433661416|gb|AGB48842.1| 23S rRNA methylase [Methanomethylovorans hollandica DSM 15978]
Length = 256
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 113/199 (56%), Gaps = 6/199 (3%)
Query: 9 RLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGS 68
R D YY AKE GYRSRA++KL+Q++ KFS ++ V+DL AAPGGW +VA + G
Sbjct: 5 RRDTYYWRAKEEGYRSRAAFKLLQINEKFSVIKEGDTVVDLGAAPGGWSEVA--KKLSGG 62
Query: 69 LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWA 128
V+G+DL I+PI G +++ DIT A +KK+ E G D+V+ D +PN+ G W+
Sbjct: 63 RVIGVDLQRISPIEGVETIKGDITSD---ATIKKIFELVGEGGVDVVICDAAPNLSGNWS 119
Query: 129 QEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASR 188
+ L ++ A + L P G FV KVF+ + L + F + P ASR
Sbjct: 120 YDHARSIDLSRSALGCAIKILKPGGHFVVKVFQGDMFKGFLEEARTDFVHTKSFSPVASR 179
Query: 189 SASAEIYLLGIKY-KAPAK 206
S SAEIY++ K+ P K
Sbjct: 180 SQSAEIYIIAKKFLNVPVK 198
>gi|440804458|gb|ELR25335.1| ribosomal RNA large subunit methyltransferase J, putative
[Acanthamoeba castellanii str. Neff]
Length = 261
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 134/242 (55%), Gaps = 18/242 (7%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYR AKE G+R+R+++KL+Q+D F+ + +DLCAAPG W QV
Sbjct: 1 MGRTS-KDKRDIYYRKAKEEGWRARSAFKLLQIDEDFNIFKDVVRAVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGSL---------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRA 111
+++ S+ ++ +DL +AP+ G + ++ DITK + V++++ +
Sbjct: 60 SRKLLGSSVPRPEGEEPKIVSVDLQEMAPLEGVIQIKGDITK---LSTVQEIIGHFEGKL 116
Query: 112 FDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYC 171
DLV+ DG+P+V G + Q L++ ++ + T L P GTF+ K+FR +D + +
Sbjct: 117 ADLVVCDGAPDVTGMHDMDEYVQAQLILAALNITTHVLKPGGTFIAKIFRGKDVTLLYEQ 176
Query: 172 LKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGS-----VEPRK 226
LK F V + KP +SR++S E ++L Y P P +++ +Q + V P +
Sbjct: 177 LKVFFPSVTIAKPKSSRNSSIESFVLCQHYTPPQGYVPTIINPMLDYQYADSNELVGPNR 236
Query: 227 VV 228
V+
Sbjct: 237 VI 238
>gi|281353664|gb|EFB29248.1| hypothetical protein PANDA_006186 [Ailuropoda melanoleuca]
Length = 320
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 128/226 (56%), Gaps = 8/226 (3%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE+G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 1 MGRTS-KDKRDVYYRLAKENGWRARSAFKLLQLDEEFHLFQGVTRAVDLCAAPGSWSQVL 59
Query: 61 VQRV-PVGS-LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
Q++ GS V+ +DL +AP+ G + ++ DIT+ + K++++ DLV+ D
Sbjct: 60 SQKIGGQGSGHVVAVDLQAMAPLPGVLQIQGDITQ---LSTAKEIIQHFEGCPADLVVCD 116
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+P+V G + Q L++ ++ +AT L P G FV K+FR +D + + L+ F
Sbjct: 117 GAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLIYSQLRVFFSS 176
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEP 224
V KP +SR++S E + + Y P P L K L S +P
Sbjct: 177 VLCAKPRSSRNSSIEAFAVCQGYDPPEGFLPDL--TKPLLDHSYDP 220
>gi|440912770|gb|ELR62311.1| Putative ribosomal RNA methyltransferase 1 [Bos grunniens mutus]
Length = 320
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 128/226 (56%), Gaps = 8/226 (3%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE+G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 1 MGRTS-KDKRDVYYRLAKENGWRARSAFKLLQLDEEFQLFQGVTRAVDLCAAPGSWSQVL 59
Query: 61 VQRV-PVGS-LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
Q++ GS V+ +DL +AP+ G + ++ DIT+ + K++++ DLV+ D
Sbjct: 60 SQKIGGQGSGHVVAVDLQAMAPLPGVLQIQGDITQ---LSTAKEIIQHFEGCPADLVVCD 116
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+P+V G + Q L++ ++ +AT L P G FV K+FR +D + + L+ F
Sbjct: 117 GAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLIYSQLRVFFSS 176
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEP 224
V KP +SR++S E + + Y P P L K L S +P
Sbjct: 177 VLCAKPRSSRNSSIEAFAVCKGYDPPEGFLPDL--TKPLLDHSYDP 220
>gi|90075218|dbj|BAE87289.1| unnamed protein product [Macaca fascicularis]
Length = 299
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 123/213 (57%), Gaps = 6/213 (2%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE+G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 1 MGRTS-KDKRDVYYRLAKENGWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVL 59
Query: 61 VQRV-PVGS-LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
Q++ GS V+ +DL +AP+ G V ++ DIT+ + K++++ DLV+ D
Sbjct: 60 SQKIGGQGSGHVVAVDLQAMAPLPGVVQIQGDITQ---LSTAKEIIQHFKGCPADLVVCD 116
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+P+V G + Q L++ ++ +AT L P G FV K+FR +D + + L+ F
Sbjct: 117 GAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLRVFFSS 176
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
V KP +SR++S E + + Y P P L
Sbjct: 177 VLCAKPRSSRNSSIEAFAVCQGYDPPEGFIPDL 209
>gi|414343696|ref|YP_006985217.1| ribosomal RNA large subunit methyltransferase J [Gluconobacter
oxydans H24]
gi|411029031|gb|AFW02286.1| ribosomal RNA large subunit methyltransferase J [Gluconobacter
oxydans H24]
Length = 266
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 111/192 (57%), Gaps = 6/192 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y A++ G+RSRA++KL+++D +F ++ V+DL AAPGGW QVAV+R +
Sbjct: 73 DPYVAAARKQGWRSRAAFKLIEIDDRFHIIKPGARVIDLGAAPGGWSQVAVKR--GAGHI 130
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
G+DL+P+ P+ GA +E D T PE R+K+++ DLV+ D +PN G A +
Sbjct: 131 AGVDLLPVDPVSGAEIIEGDFTDPEMPDRLKEILGGPA----DLVMSDMAPNTTGHAATD 186
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
M L ++ A Q LA G+FV KVF+ +L +K F V+ KP ASR
Sbjct: 187 HMRIMGLAEGALDFAMQVLAEGGSFVAKVFQGGSEKQMLDSMKLAFASVKHVKPPASRKE 246
Query: 191 SAEIYLLGIKYK 202
S+E+Y++ ++
Sbjct: 247 SSELYVIASGFR 258
>gi|150403543|ref|YP_001330837.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcus
maripaludis C7]
gi|189040314|sp|A6VJR0.1|RLME_METM7 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|150034573|gb|ABR66686.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcus
maripaludis C7]
Length = 258
Score = 132 bits (332), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 109/193 (56%), Gaps = 6/193 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D YY LAK+ YRSRA++KL QL+ KF+ ++ + V+DL APGGW+Q A V +
Sbjct: 15 DHYYNLAKKRNYRSRATYKLFQLNEKFNLIKERNVVVDLGCAPGGWLQAARDIVGEKGFI 74
Query: 71 LGLDLVPIAPI--RGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWA 128
+G+DL + P+ ++++ D+TK E + K ++ E D+++ D SPN+ G W
Sbjct: 75 VGIDLQTVKPLPYENVIAIKGDMTKEEILKQAKDLLPEKP----DVIICDASPNISGVWD 130
Query: 129 QEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASR 188
+ L ++ AT+ L G FV KVF+ + + + + F+K KP ASR
Sbjct: 131 VDHARSLELTTMALMTATKMLKKGGNFVVKVFQGDLFEKYVQLVSEYFDKAFTTKPRASR 190
Query: 189 SASAEIYLLGIKY 201
SAE+Y++G ++
Sbjct: 191 DESAEVYVIGKRF 203
>gi|45358169|ref|NP_987726.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcus
maripaludis S2]
gi|74555203|sp|Q6LZL8.1|RLME_METMP RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|44920926|emb|CAF30162.1| 23 S ribosomal RNA methyltransferase related [Methanococcus
maripaludis S2]
Length = 258
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 109/193 (56%), Gaps = 6/193 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D YY LAK YRSRA++KL QL+ KF+ ++ + V+DL APGGW+Q A V +
Sbjct: 15 DHYYNLAKRRNYRSRATYKLFQLNEKFNLIKERNVVVDLGCAPGGWLQAARDIVGEDGFI 74
Query: 71 LGLDLVPIAPIR--GAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWA 128
+G+DL + P+ ++++ D+TK E + K ++ E D+++ D SPN+ G W
Sbjct: 75 VGIDLQTVKPLPHDNIIAIKGDMTKEEILKQAKDLLPEKP----DVIICDASPNISGVWD 130
Query: 129 QEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASR 188
+ + L ++ AT+ L G FV KVF+ + + + + F+K KP ASR
Sbjct: 131 VDHVRSLELTTMALMTATKMLKKGGNFVVKVFQGDLFEKYVQLVSEYFDKAFTTKPRASR 190
Query: 189 SASAEIYLLGIKY 201
SAE+Y++G ++
Sbjct: 191 DESAEVYVIGKRF 203
>gi|195392525|ref|XP_002054908.1| GJ22540 [Drosophila virilis]
gi|194152994|gb|EDW68428.1| GJ22540 [Drosophila virilis]
Length = 316
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 129/225 (57%), Gaps = 12/225 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D +YRLAKE G+R+R+++KL+Q D F+ L +DLCAAPGGW QV
Sbjct: 1 MGK-SSKDKRDIFYRLAKEQGWRARSAFKLLQADETFNLLEGVTRAVDLCAAPGGWSQVL 59
Query: 61 VQRVPVGSL--------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAF 112
+R+ ++ +D+ +API G L +DITK E + K + G +A
Sbjct: 60 SKRLYEPRTPEEREQVKIIAVDMQGMAPIDGVTQLREDITKEETAEAIIKFFD--GKKA- 116
Query: 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCL 172
LV+ DG+P+V G +A Q L++ ++ ++T L G+F+ KV+R+ + S V L
Sbjct: 117 QLVVSDGAPDVTGMHDWDAYMQAQLLLSALSISTYILEEGGSFMGKVYRAANTSDVYLQL 176
Query: 173 KQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYL 217
++ F+ V + KP+ASR++S E +++ ++ P P L +++
Sbjct: 177 QRFFKDVCIFKPSASRNSSIEAFVVCRQFTMPEGHVPCNLSLEWF 221
>gi|66504555|ref|XP_392223.2| PREDICTED: putative ribosomal RNA methyltransferase 1-like isoform
1 [Apis mellifera]
Length = 370
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 124/225 (55%), Gaps = 16/225 (7%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+Q+D++ L + +DLCAAPG W QV
Sbjct: 1 MGKT-SKDKRDIYYRRAKEEGWRARSAFKLLQIDNECHILDGVNKAVDLCAAPGSWSQVL 59
Query: 61 VQRV------------PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHG 108
+R+ + ++ +DL +AP+ G + ++ DIT + K+++
Sbjct: 60 SRRLNENYKKALETGNAIPPKIVAVDLQAMAPLEGVIQIQGDITNID---TAKQIISHFD 116
Query: 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSV 168
DLV+ DG+P+V G + Q+ L++ ++ + T L GTFV K+FR++D + +
Sbjct: 117 NEQADLVVCDGAPDVTGLHDMDIYIQSQLLLAALNITTHILKQGGTFVAKIFRAKDVTLL 176
Query: 169 LYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLD 213
LK F V KP++SR++S E +++ Y P P +++
Sbjct: 177 YAQLKIFFPYVYCTKPSSSRNSSIEAFVVCKDYSPPEGYKPHMMN 221
>gi|347819407|ref|ZP_08872841.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Verminephrobacter
aporrectodeae subsp. tuberculatae At4]
Length = 229
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 112/198 (56%), Gaps = 9/198 (4%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV-- 64
+H D Y +LA++ GYR+RA++KL ++D + +R + V+DL PG W Q +R+
Sbjct: 17 EHVNDPYVKLARKEGYRARAAYKLQEMDEQLGLIRPGYTVVDLGCTPGAWSQYLRRRMAA 76
Query: 65 ----PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
P+ ++ LD++P+ PI G L D PE R R+++ + GV D+V+ D +
Sbjct: 77 GAAGPLDGTIIALDILPMQPIEGVTYLHGDFRAPEMRERLEQALNGRGV---DVVVSDMA 133
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
PN+ G + +A LV ++ A + L P+G V K+F YS ++ +Q F++V+
Sbjct: 134 PNLSGIGSADAARMAQLVELALDFACKHLKPEGALVAKLFHGSGYSDLVSLFQQTFQRVK 193
Query: 181 VDKPAASRSASAEIYLLG 198
KP ASR SAE +L+G
Sbjct: 194 PFKPKASRGKSAETFLVG 211
>gi|337279400|ref|YP_004618872.1| cell division protein ftsJ [Ramlibacter tataouinensis TTB310]
gi|334730477|gb|AEG92853.1| Cell division protein ftsJ [Ramlibacter tataouinensis TTB310]
Length = 220
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 115/205 (56%), Gaps = 11/205 (5%)
Query: 8 HRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV-PV 66
H D Y +LA + GYR+RA++KL ++D +R H V+DL APG W Q +R+ P
Sbjct: 18 HVNDPYVKLAHKEGYRARAAYKLKEIDEALGLIRPGHLVVDLGCAPGAWSQYVRRRLSPQ 77
Query: 67 GS-------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDG 119
G+ V+ LDL+P+ I G L+ D +PE AR++ V+ R D+V+ D
Sbjct: 78 GAAAGQLDGTVIALDLLPMEAIEGVTFLQGDFREPEVLARLQAVLAG---RKADVVVSDM 134
Query: 120 SPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKV 179
+PN+ G + +A + LV +V+ A+ L P+G V KVF YS ++ K+ F V
Sbjct: 135 APNLSGVASADAARISHLVELAVEFASAHLKPEGALVAKVFHGSGYSQLVQLFKETFRVV 194
Query: 180 EVDKPAASRSASAEIYLLGIKYKAP 204
+ KP ASR S+E +L+GI KAP
Sbjct: 195 KPLKPKASRDKSSETFLVGIGPKAP 219
>gi|329115331|ref|ZP_08244085.1| Ribosomal RNA large subunit methyltransferase E [Acetobacter
pomorum DM001]
gi|326695310|gb|EGE46997.1| Ribosomal RNA large subunit methyltransferase E [Acetobacter
pomorum DM001]
Length = 263
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 114/192 (59%), Gaps = 6/192 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y + A + G+RSRA++KL++LD +F +R ++DL AAPGGW QV V+R + V
Sbjct: 69 DPYVQAAHKQGWRSRAAFKLIELDDRFHLIRPGMRIVDLGAAPGGWTQVLVKR--GAAQV 126
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL+P+ P+ GA +E D T PE AR+ ++ G +A DLV+ D +PN G +
Sbjct: 127 VGVDLLPVEPVTGAEIIEGDFTDPEMDARLISML---GGKA-DLVVSDMAPNTTGHAPTD 182
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ L +++ A LA G FV KVF+ ++L +KQ F +V KP ASR
Sbjct: 183 HVRIIGLAEEALHFAFDILAEGGGFVAKVFQGGSEKAMLNTMKQAFTQVRHAKPPASRKD 242
Query: 191 SAEIYLLGIKYK 202
S+E+Y++ ++
Sbjct: 243 SSELYVVATGFR 254
>gi|406999295|gb|EKE16984.1| hypothetical protein ACD_10C00688G0004 [uncultured bacterium]
Length = 195
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 111/192 (57%), Gaps = 3/192 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y +LA++ G+RSRA++KL+++D K L+ V+DL A PGGW QVAV+RV
Sbjct: 3 EHFNDPYVQLARKEGWRSRAAFKLMEIDDKDKLLKKGEVVVDLGATPGGWSQVAVKRVGD 62
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
G LV LDL+ + PI G + D + + A++K E+ R LV+ D +PN+ G
Sbjct: 63 GGLVFALDLLEMEPIHGVEFILGDFREDDVLAKLK---EKLNGRQVGLVMSDMAPNMSGV 119
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ L S++ A + P G F+ KVF+ DY + +++ F+ V V KP A
Sbjct: 120 PLIDQARIMHLAELSLEFALTHMKPDGAFLVKVFQGTDYENFFRSMREAFKTVVVRKPDA 179
Query: 187 SRSASAEIYLLG 198
SR SAE+YLLG
Sbjct: 180 SRDRSAELYLLG 191
>gi|428176350|gb|EKX45235.1| hypothetical protein GUITHDRAFT_157875 [Guillardia theta CCMP2712]
Length = 294
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 130/223 (58%), Gaps = 11/223 (4%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYR AKE G+R+R+++KL+QLD +F L + V+DLCAAPG W QV
Sbjct: 1 MGR-AAKDKRDIYYRKAKEVGFRARSAFKLLQLDEEFKLLEGVNRVVDLCAAPGSWSQVI 59
Query: 61 VQRVP---VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117
+++ S ++ +DL +API G ++ DIT ++ ++ + G +A D+V+
Sbjct: 60 SRQLADRRDQSKIVAVDLQEMAPIEGVTLVQGDITSSVVADKIVQLFD--GQKA-DIVVS 116
Query: 118 DGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFE 177
DG+P+V G + Q+ L++ ++ + T L P G+FV K+FR +D + + LK F
Sbjct: 117 DGAPDVTGLHDIDEYVQSQLLLSALNITTVLLRPGGSFVAKIFRGKDVTLLYSQLKIFFP 176
Query: 178 KVEVDKPAASRSASAEIYLLGIKYKAPAK----IDPRLLDVKY 216
V KP +SR++S E +++ Y PA +D LLD KY
Sbjct: 177 FVTCAKPKSSRNSSIESFIVCKGYCPPAGYIPCLDKPLLDFKY 219
>gi|307183163|gb|EFN70073.1| Putative ribosomal RNA methyltransferase 1 [Camponotus floridanus]
Length = 381
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 123/225 (54%), Gaps = 16/225 (7%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+Q+D++ +DLCAAPG W QV
Sbjct: 1 MGKT-SKDKRDIYYRKAKEEGWRARSAFKLLQIDTECHIFDGVSKAVDLCAAPGSWSQVL 59
Query: 61 VQRV--------PVGSL----VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHG 108
+++ G+ ++ +DL +AP+ G + L+ DIT ++++
Sbjct: 60 ARKLNENYKKALETGNASPPKIVAVDLQAMAPLEGVIQLQGDITNTN---TAQQIIAHFD 116
Query: 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSV 168
DLV+ DG+P+V G + Q+ L++ ++ + T L P GTFV K+FR++D S +
Sbjct: 117 NTQADLVVCDGAPDVTGLHDMDIFIQSQLLLAALNITTHILRPGGTFVAKIFRAKDVSFL 176
Query: 169 LYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLD 213
L+ F V KP++SR++S E +++ Y P P +L+
Sbjct: 177 YAQLRIFFPYVYCTKPSSSRNSSIEAFVVCKDYSPPEGYKPHMLN 221
>gi|307208282|gb|EFN85714.1| Putative ribosomal RNA methyltransferase 1 [Harpegnathos saltator]
Length = 361
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 122/226 (53%), Gaps = 17/226 (7%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQV- 59
MGK K + D YYR AKE G+R+R+++KL+Q+D + +DLCAAPG W QV
Sbjct: 1 MGKT-SKDKRDIYYRRAKEEGWRARSAFKLLQIDQECRIFNGVSKTIDLCAAPGSWSQVL 59
Query: 60 ----------AVQRVPVGSL--VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEH 107
A++ S ++ +DL +AP+ G + L+ DIT K+++
Sbjct: 60 ALKLNENYKKALEESSAASPPKIVAVDLQAMAPLEGVIQLQGDITNTN---TAKEIIAHF 116
Query: 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSS 167
DLV+ DG+P+V G + Q+ L++ ++ + T L P GTFV K+FR++D +
Sbjct: 117 DNTQADLVVCDGAPDVTGLHDMDIFIQSQLLLAALNITTHILRPGGTFVAKIFRAKDVTF 176
Query: 168 VLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLD 213
+ L+ F V KP++SR++S E +++ Y P +P +L+
Sbjct: 177 LYAQLRIFFSYVYCAKPSSSRNSSIEAFVVCKNYSPPEGYEPHMLN 222
>gi|147919157|ref|YP_687110.1| 23S rRNA methyltransferase J [Methanocella arvoryzae MRE50]
gi|121685265|sp|Q0W1F9.1|RLME_UNCMA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|110622506|emb|CAJ37784.1| 23S rRNA methyltransferase J [Methanocella arvoryzae MRE50]
Length = 256
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 110/188 (58%), Gaps = 6/188 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D YY AK+ GYRSRAS+KL ++ K ++ V+DL AAPGGW+QVA + + G V
Sbjct: 7 DHYYNKAKQMGYRSRASFKLQFINKKHHIIKKGDTVVDLGAAPGGWLQVA-KELNGGGKV 65
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL I PI G +++ D+T PE +AR+ ++++E D V+ D +PN+ G WA +
Sbjct: 66 IGVDLQRIEPIEGVETIKGDMTSPETQARIFEIVDE-----VDTVICDAAPNLSGNWALD 120
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
L ++ +AT+ L G FV KVF+ Y + + + + F K ASR
Sbjct: 121 HARSIDLATVALDVATKLLKKGGNFVVKVFQGDLYENYVKEVGKRFSYATTYKSQASRQQ 180
Query: 191 SAEIYLLG 198
SAEIY++G
Sbjct: 181 SAEIYVIG 188
>gi|357031417|ref|ZP_09093360.1| ribosomal RNA large subunit methyltransferase J [Gluconobacter
morbifer G707]
gi|356414647|gb|EHH68291.1| ribosomal RNA large subunit methyltransferase J [Gluconobacter
morbifer G707]
Length = 272
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 107/192 (55%), Gaps = 6/192 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y A++ G+RSRA++KL+++D +F + ++DL AAPGGW QVAV+R V
Sbjct: 73 DPYVAAARKQGWRSRAAFKLIEIDDRFHLIHPGTRIIDLGAAPGGWTQVAVKR--GAQHV 130
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
GLDL+P+ P+ GA +E D T P R+K ++ DLV+ D +PN G A +
Sbjct: 131 AGLDLLPVDPVAGAEIIEGDFTDPAMPDRLKDILGGPA----DLVMSDMAPNTTGHAATD 186
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
M L ++ A Q LA G FV KVF+ +L +K FE V KP ASR
Sbjct: 187 HMRIMGLAEGALDFAFQVLAEGGGFVAKVFQGGSEKRMLDAMKLAFETVRHVKPPASRKE 246
Query: 191 SAEIYLLGIKYK 202
S+E+Y++ ++
Sbjct: 247 SSELYVIATGFR 258
>gi|340710519|ref|XP_003393835.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like isoform
2 [Bombus terrestris]
Length = 365
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 123/221 (55%), Gaps = 12/221 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+Q+D++ L + +DLCAAPG W QV
Sbjct: 1 MGKT-SKDKRDIYYRRAKEEGWRARSAFKLLQIDNECHILDGVNKAVDLCAAPGSWSQVL 59
Query: 61 VQRVPVG--------SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAF 112
+R+ ++ +DL +AP+ G + ++ DIT K+++
Sbjct: 60 SRRLKYALEAGNATPPKIVAVDLQAMAPMEGVIQIQGDITNIN---TAKQIISHFDNEQA 116
Query: 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCL 172
DLV+ DG+P+V G + Q+ L++ ++ + T L GTFV K+FR++D + + L
Sbjct: 117 DLVVCDGAPDVTGLHDMDIYIQSQLLLAALNITTHILRQGGTFVAKIFRAKDVTLLYAQL 176
Query: 173 KQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLD 213
K F V KP++SR++S E +++ Y P +P +L+
Sbjct: 177 KIFFPYVYCTKPSSSRNSSIEAFVVCKDYSPPEGYEPHMLN 217
>gi|298400895|gb|ADI81767.1| cell division protein [Heliconius melpomene melpomene]
Length = 273
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 129/229 (56%), Gaps = 17/229 (7%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
K + D YYRLAKE G+R+R+++KL+Q++ +++ +DLCAAPG W QV +++
Sbjct: 3 KDKRDIYYRLAKEEGWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQVLTKKLRQ 62
Query: 67 GSL------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
+ ++ +DL +AP+ G ++ DITK + K E G++A DLV+ DG+
Sbjct: 63 NTSNTDDVKIVAVDLQAMAPLPGVKQIQGDITKISTAHEIIK--EFEGLKA-DLVVCDGA 119
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
P+V G + Q+ L++ ++ + T L G FV K+FR +D + + LK F+ V
Sbjct: 120 PDVTGLHDIDEYVQSQLLLAALNITTHVLKEGGVFVAKIFRGKDVTLLYSQLKLFFDFVT 179
Query: 181 VDKPAASRSASAEIYLLGIKYKAPAKIDPR----LLDVKYL----FQGS 221
V KP +SR++S E +++ YKAP P LLD KY F GS
Sbjct: 180 VSKPRSSRNSSIEAFVICQNYKAPPGYVPTMVNPLLDHKYCNFNQFTGS 228
>gi|258617564|gb|ACV83779.1| cell division-like protein [Heliconius melpomene]
Length = 292
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 131/235 (55%), Gaps = 18/235 (7%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYRLAKE G+R+R+++KL+Q++ +++ +DLCAAPG W QV
Sbjct: 1 MGKT-SKDKRDIYYRLAKEEGWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGSL------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114
+++ + ++ +DL +A + G ++ DITK + K E G++A DL
Sbjct: 60 TKKLRQNTSNTDDVKIVAVDLQAMAALPGVKQIQGDITKISTAHEIIK--EFEGLKA-DL 116
Query: 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQ 174
V+ DG+P+V G + Q+ L++ ++ + T L G FV K+FR +D + + LK
Sbjct: 117 VVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKEGGVFVAKIFRGKDVTLLYSQLKL 176
Query: 175 LFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPR----LLDVKYL----FQGS 221
F+ V V KP +SR++S E +++ YKAP P LLD KY F GS
Sbjct: 177 FFDYVTVSKPRSSRNSSIEAFVICQNYKAPPGYVPTMVNPLLDHKYCNFNQFTGS 231
>gi|11499633|ref|NP_070875.1| cell division protein FtsJ [Archaeoglobus fulgidus DSM 4304]
gi|9911012|sp|O28228.1|RLME_ARCFU RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|2648490|gb|AAB89203.1| cell division protein (ftsJ) [Archaeoglobus fulgidus DSM 4304]
Length = 191
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 108/196 (55%), Gaps = 8/196 (4%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
K R D YY AK+ GYRSRA++KL+Q++ F +R VLDL A PGGW QVA +
Sbjct: 2 KDRQDYYYWKAKKEGYRSRAAYKLLQMNRTFKLIREGDLVLDLGATPGGWSQVAAL---L 58
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
G+ V+ +D+ P+ P+ + DIT PE +++++ ++ D+V+ D SP + G
Sbjct: 59 GARVVAVDINPMKPLENVTFIRGDITLPETLEKIREISPDY-----DVVMSDASPKISGK 113
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
W + + L S +A + L P G FV KVF+ ++ LK F + P A
Sbjct: 114 WTIDHLRSIDLARASFSIAKEVLKPGGNFVVKVFQGEEIQKFFNELKPHFRFKKFHSPQA 173
Query: 187 SRSASAEIYLLGIKYK 202
SR SAE+Y +G +++
Sbjct: 174 SRKRSAEVYFIGKRFR 189
>gi|391336629|ref|XP_003742681.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like
[Metaseiulus occidentalis]
Length = 313
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 125/218 (57%), Gaps = 11/218 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE G+R+R+++KL+Q++ F+ V+DLCAAPG W QV
Sbjct: 1 MGRA-AKDKRDVYYRLAKEEGWRARSAFKLLQINEHFNIFEGVKRVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGSL-------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFD 113
+++ G+ ++ +DL +AP+ G ++ DITK A ++++++ D
Sbjct: 60 SRKLRKGNAHNEHEVKIVAVDLQEMAPLEGVFQIQGDITK---LATAQQIVQQFEGEKAD 116
Query: 114 LVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLK 173
LV+ DG+P+V G + Q L+I ++ + T L P G V K+FR +D + + L+
Sbjct: 117 LVVCDGAPDVTGFHDMDEYIQGQLLIAALNITTHVLKPHGNMVAKIFRGRDVALLTSKLE 176
Query: 174 QLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
F++V + KP++SR++S E + + + Y P P +
Sbjct: 177 LFFKRVVIAKPSSSRNSSIEAFAVCLDYCPPDDYVPHM 214
>gi|146180987|ref|XP_001021884.2| FtsJ-like methyltransferase family protein [Tetrahymena
thermophila]
gi|146144344|gb|EAS01639.2| FtsJ-like methyltransferase family protein [Tetrahymena thermophila
SB210]
Length = 329
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 124/233 (53%), Gaps = 14/233 (6%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE +R+R+++KL+Q+D F ++ V+DLCAAPG W QV
Sbjct: 66 MGKF-TKDKRDIYYRKAKEDCFRARSAYKLLQIDEVFGIFENAERVIDLCAAPGSWSQVV 124
Query: 61 VQRVPVGSL----------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVR 110
+++ L ++ +DL +API V L+ DITK E V +++ +
Sbjct: 125 SKKLTEKGLFKDSNGEDVRIISIDLQEMAPIDNVVQLQGDITKKE---TVDEILHKFKGN 181
Query: 111 AFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLY 170
+LV+ DG+P+V G + Q+ L++ ++ + + L G FV K+F+ D +
Sbjct: 182 KANLVIDDGAPDVTGFHDIDQYLQSQLMVAALNICNETLKKGGHFVAKIFKGTDIKFLYS 241
Query: 171 CLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVE 223
K F+ V V KP +SR++S E +L+ ++Y P + Y FQ +E
Sbjct: 242 QFKLFFKSVYVVKPKSSRASSVENFLVCLQYDPPQSFENSTTKSLYTFQPEIE 294
>gi|134046035|ref|YP_001097521.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcus
maripaludis C5]
gi|189040313|sp|A4FYM2.1|RLME_METM5 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|132663660|gb|ABO35306.1| 23S rRNA Um-2552 2'-O-methyltransferase [Methanococcus maripaludis
C5]
Length = 258
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 109/193 (56%), Gaps = 6/193 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D YY LAK+ YRSRA++KL QL+ KF+ ++ + V+DL APGGW+Q A V +
Sbjct: 15 DHYYNLAKKRNYRSRATYKLFQLNEKFNLIKERNVVVDLGCAPGGWLQAARDIVGDKGFI 74
Query: 71 LGLDLVPIAPI--RGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWA 128
+G+DL + P+ ++++ D+TK E + + ++ E D+++ D SPN+ G W
Sbjct: 75 VGIDLQTVKPLPYENVIAIKGDMTKEEILKQARDLLPEKP----DVIICDASPNISGVWD 130
Query: 129 QEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASR 188
+ L ++ AT+ L G FV KVF+ + + + + F+K KP ASR
Sbjct: 131 VDHARSLELTTMALMTATKMLKKGGNFVVKVFQGDLFEKYVQLVSEYFDKAFTTKPRASR 190
Query: 189 SASAEIYLLGIKY 201
SAE+Y++G ++
Sbjct: 191 DESAEVYVIGKRF 203
>gi|281208196|gb|EFA82374.1| rRNA methyltransferase [Polysphondylium pallidum PN500]
Length = 274
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 121/218 (55%), Gaps = 9/218 (4%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+Q+D + V+DLCAAPG W QV
Sbjct: 1 MGK-SSKDKRDIYYRKAKEEGWRARSAFKLLQIDDDHNIFGGVKRVVDLCAAPGSWSQVL 59
Query: 61 VQRVPV-GS----LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV 115
+R+ GS ++ +D+ +AP++G + ++ DITK V +++ DLV
Sbjct: 60 SRRIYGDGSDPDVKIVAVDIQEMAPLKGVLQIKGDITK---LTTVNQIISHFDGSLADLV 116
Query: 116 LHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL 175
+ DG+P+V G + Q L++ + + T L GTFV K+F+ D + + +K
Sbjct: 117 VSDGAPDVTGLHDIDFYGQAQLILSAFNITTHVLCRGGTFVAKMFKGNDMTLMYNQMKLF 176
Query: 176 FEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLD 213
FEKV KP +SR +S E ++L Y+ P P ++D
Sbjct: 177 FEKVSFVKPKSSRDSSLENFILCQNYQPPTDFTPTMID 214
>gi|440909767|gb|ELR59644.1| hypothetical protein M91_11689, partial [Bos grunniens mutus]
Length = 272
Score = 131 bits (329), Expect = 2e-27, Method: Composition-based stats.
Identities = 78/226 (34%), Positives = 126/226 (55%), Gaps = 8/226 (3%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ + + D Y+RL+KE+G+R+ +++KL+QLD +F + +DLCAAPGGW QV
Sbjct: 23 MGRTS-EDKQDVYHRLSKENGWRAHSAFKLLQLDEEFHLFQGVMRAVDLCAAPGGWTQVL 81
Query: 61 VQRV--PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
Q++ V+ +DL +AP+ G V ++ DIT+ + K++++ DLV+ D
Sbjct: 82 SQKIGGQGSGHVVAVDLQAMAPLPGVVQIQGDITQ---LSTAKEIVQHFEDCPADLVVCD 138
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+P+V G + Q+ L++ ++ +AT L P G FV K+FR +D + V L+ F
Sbjct: 139 GAPDVTGLHDVDEYMQSQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLVYSQLRVFFSS 198
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEP 224
V KP +SR+ S E + + Y P P L K L S +P
Sbjct: 199 VLCAKPRSSRNTSIEAFAVCKGYDPPEGFLPDL--SKPLLDHSYDP 242
>gi|114327810|ref|YP_744967.1| methyltransferase [Granulibacter bethesdensis CGDNIH1]
gi|122327225|sp|Q0BT08.1|RLME_GRABC RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|114315984|gb|ABI62044.1| methyltransferase [Granulibacter bethesdensis CGDNIH1]
Length = 230
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 113/192 (58%), Gaps = 6/192 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y AK G+RSRA++KL++LD KF + V+DL AAPGGW QVA++R ++V
Sbjct: 39 DPYVAAAKAQGWRSRAAFKLIELDDKFGLISKGSRVIDLGAAPGGWTQVAMKR--GAAVV 96
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL+P+ P+ GA ++ D + AR+ +M G +A DLV+ D +PN G A +
Sbjct: 97 VGVDLLPVDPVPGATLIQGDFNDDDMPARLSSLM---GGKA-DLVMSDMAPNTTGHAATD 152
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
M AL ++ A LAP G FV KVF+ +L +KQ F V KPA+SR
Sbjct: 153 HMRIIALTELALHFAFDALAPGGAFVAKVFQGGSEKQLLEPMKQRFASVRHAKPASSRKE 212
Query: 191 SAEIYLLGIKYK 202
S+E+Y++ ++
Sbjct: 213 SSELYVVAKGFR 224
>gi|449439914|ref|XP_004137730.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like [Cucumis
sativus]
gi|449483463|ref|XP_004156599.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like [Cucumis
sativus]
Length = 316
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 120/218 (55%), Gaps = 20/218 (9%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK R D YYR AKE G+R+R+++KL+Q+D +F+ V+DLCAAPG W QV
Sbjct: 1 MGKASRDKR-DIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGS------------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEH- 107
+++ + + L++ +DL P+API G + ++ DIT AR +V+ H
Sbjct: 60 SRKLYLPAKLSPDLKDGELPLIVAIDLQPMAPIEGVIEVQGDITN----ARTAEVVIRHF 115
Query: 108 -GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYS 166
G +A DLV+ DG+P+V G + Q L++ + + T L G F+ K+FR +D S
Sbjct: 116 DGCKA-DLVVCDGAPDVTGLHDMDEFVQFQLILAGLTIVTHILREGGKFIAKIFRGKDTS 174
Query: 167 SVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAP 204
+ LK F V KP +SR++S E + + Y P
Sbjct: 175 LLYSQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYSPP 212
>gi|383320393|ref|YP_005381234.1| 23S rRNA Um2552-methyltransferase [Methanocella conradii HZ254]
gi|379321763|gb|AFD00716.1| 23S rRNA Um-2552 2'-O-methyltransferase [Methanocella conradii
HZ254]
Length = 261
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 114/188 (60%), Gaps = 7/188 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D +Y AK+ GYRSRA++KL ++ KF +++ V+DL AAPGGW+QVA + G V
Sbjct: 16 DVFYNKAKQMGYRSRAAFKLKFINEKFGIIKAGDVVVDLGAAPGGWLQVAKEL--SGGTV 73
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL I PI G ++++ D+T PE + +K+ E+ V ++V+ D +PN+ G WA +
Sbjct: 74 IGVDLQKIEPIEGVITIKGDMTSPETQ---QKIFEK--VEKVNVVICDAAPNLTGNWALD 128
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
L ++ +A++ L P G F+ KVF+ Y + ++ F +V K ASR+
Sbjct: 129 HARSIDLAKTALDVASRLLVPGGNFLVKVFQGDLYQGFVEEAEKRFSRVYTYKSPASRAQ 188
Query: 191 SAEIYLLG 198
SAEIY++G
Sbjct: 189 SAEIYVIG 196
>gi|156368067|ref|XP_001627518.1| predicted protein [Nematostella vectensis]
gi|156214430|gb|EDO35418.1| predicted protein [Nematostella vectensis]
Length = 316
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 120/223 (53%), Gaps = 20/223 (8%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE G+R+R+++KL+QL+ F V+DLCAAPG W QV
Sbjct: 1 MGR-SSKDKRDIYYRLAKEEGWRARSAFKLLQLNEDFDLFSGVSKVVDLCAAPGSWSQVL 59
Query: 61 VQRV-----------PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVME-EHG 108
+++ P ++ +DL +AP+ G + ++ DITK ++ E EH
Sbjct: 60 SRKLIEEKQDEEGEKPK---IVAVDLQAMAPLPGVIQIQGDITKTSTANQIISHFEGEHA 116
Query: 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSV 168
DLV+ DG+P+V G + Q L++ ++ + T L P G FV K+FR +D S +
Sbjct: 117 ----DLVICDGAPDVTGLHDIDEYIQGQLLLAALNITTHVLKPGGNFVAKIFRGKDVSLL 172
Query: 169 LYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
LK F V + KP +SR++S E +++ Y P P +
Sbjct: 173 YAQLKVFFPTVTICKPRSSRNSSIESFVVCQGYAPPQGYKPTM 215
>gi|333911590|ref|YP_004485323.1| ribosomal RNA large subunit methyltransferase E [Methanotorris
igneus Kol 5]
gi|333752179|gb|AEF97258.1| Ribosomal RNA large subunit methyltransferase E [Methanotorris
igneus Kol 5]
Length = 245
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 112/193 (58%), Gaps = 5/193 (2%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D YY LAK+ YRSRA++KL QL+ KF F++ V+DL APGGW+Q A + V V
Sbjct: 15 DFYYNLAKKQKYRSRATFKLFQLNEKFRFMKEGDIVVDLGCAPGGWLQAAREIVGDRGFV 74
Query: 71 LGLDLVPIAPIR--GAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWA 128
+G+DL + P+ +++ D+TK E ++++++ +V+ D SPN+ G W
Sbjct: 75 VGVDLQSVKPLPYDNVKTIKGDMTKEETIQKIREILYPAKP---TVVISDASPNISGVWD 131
Query: 129 QEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASR 188
+ L ++K+ATQ L +G FV KVF+ + + +++ FEKV KP ASR
Sbjct: 132 VDHARSIELTTIALKIATQLLKERGNFVVKVFQGDMFMDYVSLVEKYFEKVYPTKPRASR 191
Query: 189 SASAEIYLLGIKY 201
S+E+Y++ +Y
Sbjct: 192 KESSEVYVVAKRY 204
>gi|341616215|ref|ZP_08703084.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Citromicrobium sp.
JLT1363]
Length = 225
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 105/193 (54%), Gaps = 5/193 (2%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y R AK GYRSRA++KL++LD KF LR S ++DL APGGW QVA+++ P +V
Sbjct: 32 DPYVREAKAAGYRSRAAFKLIELDEKFGILRGSERIVDLGIAPGGWAQVAIKKRPQARIV 91
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
G+DL+P PI G LE D E + EH A DLV+ D + N G +
Sbjct: 92 -GIDLLPTEPIEGVTILEMDFMADEA----PDAIMEHLGGAPDLVMSDMAANTVGHKQTD 146
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ LV + A Q LAP G F+ KV + +L LKQ F+ V+ KP ASR
Sbjct: 147 HLRTMGLVETAADFAIQTLAPGGQFLAKVLAGGTDAELLKLLKQNFKTVKHAKPPASRKG 206
Query: 191 SAEIYLLGIKYKA 203
S+E Y++ +K
Sbjct: 207 SSEWYVVAQGFKG 219
>gi|123977189|ref|XP_001330767.1| cell division protein [Trichomonas vaginalis G3]
gi|121912578|gb|EAY17398.1| cell division protein, putative [Trichomonas vaginalis G3]
Length = 244
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 113/204 (55%), Gaps = 7/204 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQR---VPVG 67
D +YR AK+ G+R+R+++KL+Q+ F + V+DLCAAPG W QV Q+ VP
Sbjct: 9 DTFYRAAKQEGWRARSAFKLIQVADHFRLFDNVTRVVDLCAAPGSWSQVCAQKLSKVP-N 67
Query: 68 SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAW 127
S ++ +DL P+API G + + DIT E +V M +G +A DLV+ DG+P+V G
Sbjct: 68 SAIVAVDLQPMAPIPGVIQIRGDITSKETAQQVIDAM--NGKKA-DLVISDGAPDVTGLH 124
Query: 128 AQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAAS 187
+ Q+ LV + +A L GTF+ K+F +D + L FE V KP AS
Sbjct: 125 DLDEYMQSQLVFSAFNIACFMLREGGTFMAKIFTGRDIQDLYSSLSPFFETVTAMKPRAS 184
Query: 188 RSASAEIYLLGIKYKAPAKIDPRL 211
R AS E +++ ++ P P L
Sbjct: 185 RVASLESFVVCQGFRLPEGYTPIL 208
>gi|148702026|gb|EDL33973.1| Ftsj homolog 1 (E. coli), isoform CRA_b [Mus musculus]
Length = 344
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 130/234 (55%), Gaps = 10/234 (4%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE+G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 23 MGRTS-KDKRDVYYRLAKENGWRARSAFKLLQLDEEFQLFKGVKRAVDLCAAPGSWSQVL 81
Query: 61 VQRV-PVGS-LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
Q+V GS V+ +DL +AP+ G + ++ DIT+ + K++++ DLV+ D
Sbjct: 82 SQKVGGQGSGQVVAVDLQAMAPLPGVIQIQGDITQ---LSTAKEIIQHFEGCPADLVVCD 138
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+P+V G + Q L++ ++ +AT L G FV K+FR +D + + L+ F
Sbjct: 139 GAPDVTGLHDVDEYMQAQLLLAALNIATHVLKLGGCFVAKIFRGRDVTLLYSQLRIFFSS 198
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDP----RLLDVKYLFQGSVEPRKVV 228
V KP +SR++S E + + Y P P LL+ Y F P +V+
Sbjct: 199 VLCAKPKSSRNSSIEAFAVCQGYDPPEGFIPDLTRPLLNHSYDFNQLDGPTRVI 252
>gi|331214017|ref|XP_003319690.1| ribosomal RNA large subunit methyltransferase E [Puccinia graminis
f. sp. tritici CRL 75-36-700-3]
gi|309298680|gb|EFP75271.1| ribosomal RNA large subunit methyltransferase E [Puccinia graminis
f. sp. tritici CRL 75-36-700-3]
Length = 299
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 124/224 (55%), Gaps = 19/224 (8%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFS-FLRSSHAV---LDLCAAPGGW 56
MGK K + D YYRL K GYR+R+++KL+ LD + F S AV +DLCAAPG W
Sbjct: 1 MGKCS-KDKRDIYYRLGKSEGYRARSAYKLIHLDELYGLFNHPSQAVDRVIDLCAAPGSW 59
Query: 57 MQVAVQRV---------PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEH 107
QV V+++ P + ++ +DL P+API G V + DITK E + E
Sbjct: 60 SQVLVKKLNETRSAEEEP--AKIVAVDLQPMAPIDGVVQIVGDITKLETATSILSHFE-- 115
Query: 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSS 167
G +A DLV+ DG+P+V G + Q+ L++ ++ + L P GTFV K+FR +D +
Sbjct: 116 GQKA-DLVVCDGAPDVTGLHDLDEFVQSQLLLAALNITLSVLKPGGTFVAKIFRGRDVNM 174
Query: 168 VLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
+ L F +V+ KP +SRS+S E +++ Y P P +
Sbjct: 175 IYDQLLNFFGEVDCAKPRSSRSSSIEAFVVCRNYAPPDGFVPDM 218
>gi|339053445|ref|ZP_08648154.1| Cell division protein FtsJ / Ribosomal RNA large subunit
methyltransferase J [gamma proteobacterium IMCC2047]
gi|330721347|gb|EGG99422.1| Cell division protein FtsJ / Ribosomal RNA large subunit
methyltransferase J [gamma proteobacterium IMCC2047]
Length = 207
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 116/202 (57%), Gaps = 3/202 (1%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
G+ +H D+Y + +++ GYRSRAS+KL++L K + +VLDL +APGGW QVAV
Sbjct: 8 GRWLDEHFNDQYVKKSQQDGYRSRASYKLLELQDKDKLFKPGMSVLDLGSAPGGWSQVAV 67
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ V V+ D++P+ PI GA +E D T+ E ++ V+ E V DLV+ D +P
Sbjct: 68 ELVGDKGRVVASDILPMEPIAGADFVEGDFTEMEVYDQILNVLGEDKV---DLVISDMAP 124
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
N+ G A + LV +V +A Q L P G + KVF + +L + F+KV++
Sbjct: 125 NMSGVSAVDQPKAMYLVELAVDMADQILKPGGALIAKVFHGDGFDELLKTTRSKFKKVQI 184
Query: 182 DKPAASRSASAEIYLLGIKYKA 203
KP ASR+ S E YL+ +KA
Sbjct: 185 RKPDASRARSKEQYLVAKDFKA 206
>gi|194764569|ref|XP_001964401.1| GF23069 [Drosophila ananassae]
gi|190614673|gb|EDV30197.1| GF23069 [Drosophila ananassae]
Length = 405
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 120/212 (56%), Gaps = 12/212 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D +YRLAKE G+R+R+++KL+Q D F L H +DLCAAPG W QV
Sbjct: 1 MGKT-SKDKRDIFYRLAKEQGWRARSAFKLLQADETFHLLDGLHRAVDLCAAPGSWSQVL 59
Query: 61 VQRV--PVGS------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAF 112
+ + P+ ++ +D+ +API G + +DI+K + E G +A
Sbjct: 60 AKHMYEPLSEEDKKKVKIIAVDMQGMAPIEGVTQMREDISKESTAEAIINFFE--GEKA- 116
Query: 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCL 172
+V+ DG+P+ G ++ Q LVI ++ +AT L G+FV+K++R S +
Sbjct: 117 QIVVCDGAPDSTGMHDFDSYVQIELVITAISIATYILEEGGSFVSKIYRCDKTSKAYTQM 176
Query: 173 KQLFEKVEVDKPAASRSASAEIYLLGIKYKAP 204
K+ F+ V V KP+ASR++S E +++G ++ P
Sbjct: 177 KRFFKDVCVFKPSASRNSSIEAFVIGRQFCLP 208
>gi|340710517|ref|XP_003393834.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like isoform
1 [Bombus terrestris]
Length = 369
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 123/225 (54%), Gaps = 16/225 (7%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+Q+D++ L + +DLCAAPG W QV
Sbjct: 1 MGKT-SKDKRDIYYRRAKEEGWRARSAFKLLQIDNECHILDGVNKAVDLCAAPGSWSQVL 59
Query: 61 VQRV------------PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHG 108
+R+ ++ +DL +AP+ G + ++ DIT K+++
Sbjct: 60 SRRLNENYKKALEAGNATPPKIVAVDLQAMAPMEGVIQIQGDITNIN---TAKQIISHFD 116
Query: 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSV 168
DLV+ DG+P+V G + Q+ L++ ++ + T L GTFV K+FR++D + +
Sbjct: 117 NEQADLVVCDGAPDVTGLHDMDIYIQSQLLLAALNITTHILRQGGTFVAKIFRAKDVTLL 176
Query: 169 LYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLD 213
LK F V KP++SR++S E +++ Y P +P +L+
Sbjct: 177 YAQLKIFFPYVYCTKPSSSRNSSIEAFVVCKDYSPPEGYEPHMLN 221
>gi|47214710|emb|CAG01063.1| unnamed protein product [Tetraodon nigroviridis]
Length = 297
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 123/225 (54%), Gaps = 13/225 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE G+R+R+++KL+QLD +F V+DLCAAPG W QV
Sbjct: 1 MGR-SSKDKRDIYYRLAKEEGWRARSAFKLLQLDQEFDLFTGVTRVVDLCAAPGSWSQVL 59
Query: 61 VQRV-----PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV 115
+++ + ++ +DL +AP+ G ++ DITK ++++ + DLV
Sbjct: 60 SRKLRQDERAEEAKIVAVDLQAMAPLPGVTQIQGDITK---VTTAQEIIRHFEGQPADLV 116
Query: 116 LHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL 175
+ DG+P+V G + Q L++ ++ + T L P GTFV K+FR +D + + LK
Sbjct: 117 VCDGAPDVTGLHDVDEYIQAQLLLAALNITTHVLKPGGTFVAKIFRGKDVTLLYSQLKIF 176
Query: 176 FEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPR----LLDVKY 216
F V KP +SR++S E +++ Y P P LLD Y
Sbjct: 177 FTGVTCAKPRSSRNSSIEAFVVCQNYSPPKGYVPNMSNPLLDHSY 221
>gi|308804277|ref|XP_003079451.1| FtsJ-like methyltransferase family protein (ISS) [Ostreococcus
tauri]
gi|116057906|emb|CAL54109.1| FtsJ-like methyltransferase family protein (ISS) [Ostreococcus
tauri]
Length = 328
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 115/202 (56%), Gaps = 15/202 (7%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+Q+D F R +DLCAAPG W QV
Sbjct: 20 MGK-SSKDKRDIYYRKAKEEGWRARSAFKLLQIDESFDIFRGVKHAVDLCAAPGSWSQVL 78
Query: 61 VQRVPVGSL-----------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGV 109
+++ + ++ ++ +DL P+API G +++ DIT + +V +V+
Sbjct: 79 SRKLYLPAVRAGVSESELPKIVAIDLQPMAPIEGVTTIQGDITSLD---KVLEVLSHFDG 135
Query: 110 RAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVL 169
+ DL++ DG+P+V G + Q L++ + +AT L P GTF+ K+FR +D S +
Sbjct: 136 KQADLIVGDGAPDVTGLHDLDEFMQAQLILAGLTVATHILKPGGTFIAKIFRGKDVSLLY 195
Query: 170 YCLKQLFEKVEVDKPAASRSAS 191
LK F V KP +SR++S
Sbjct: 196 SQLKIFFPDVTCAKPKSSRNSS 217
>gi|307199137|gb|EFN79847.1| Putative rRNA methyltransferase 3 [Harpegnathos saltator]
Length = 853
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 122/200 (61%), Gaps = 26/200 (13%)
Query: 608 FEIVPAPGADSSDDSSSDESEDEEVDTK----AEILACAKKMLR-KKQREQILDDAYNRY 662
FEIVP +E ED+ K AE LA +++ KK R ++D A+N+Y
Sbjct: 631 FEIVP-----------REEGEDKRSKKKRKLTAEDLALGSLLIQSKKSRRDLIDSAWNKY 679
Query: 663 MFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAM 722
F+D+ LPDWF+++E RH + PV E + K + ++++ RP KKV EAKARKK+ A+
Sbjct: 680 AFNDEKLPDWFVKDEERHMKKEAPVPIELVNDYKKRVEDLNVRPIKKVMEAKARKKKRAI 739
Query: 723 RKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKE--YVVAKKGV----QVR 776
RKLEK +KK + D DISDR K +Q+ LYK A K PKKE YVVAKK + VR
Sbjct: 740 RKLEKAKKKVEALMDNTDISDREKARQVAALYKKA-SKEPKKEVTYVVAKKHLAQKRTVR 798
Query: 777 -AG-KGKV-LVDPRMKKDSR 793
AG KG+ +VDPRMKKD R
Sbjct: 799 PAGVKGRYKVVDPRMKKDIR 818
>gi|383853658|ref|XP_003702339.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like
[Megachile rotundata]
Length = 369
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 123/226 (54%), Gaps = 18/226 (7%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+Q+D++ L +DLCAAPG W QV
Sbjct: 1 MGKT-SKDKRDIYYRRAKEEGWRARSAFKLLQIDNECHILDGVSKAVDLCAAPGSWSQVL 59
Query: 61 VQRV------------PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVME-EH 107
+R+ ++ +DL +AP+ G + ++ DIT + ++ + EH
Sbjct: 60 SRRLNENYKKALEKGDATAPKIVAVDLQAMAPLEGVIQIQGDITNTKTAEQIIAHFDNEH 119
Query: 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSS 167
DLV+ DG+P+V G + Q+ L++ ++ + T L GTFV K+FR++D S
Sbjct: 120 A----DLVVCDGAPDVTGLHDMDIYIQSQLLLAALNITTHILRQGGTFVAKIFRAKDVSL 175
Query: 168 VLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLD 213
+ LK F V KP++SR++S E +++ Y P P +L+
Sbjct: 176 LYSQLKIFFPYVYCTKPSSSRNSSIEAFVVCKDYSPPEGYKPHMLN 221
>gi|22028410|gb|AAH34880.1| FtsJ homolog 1 (E. coli) [Mus musculus]
Length = 322
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 130/234 (55%), Gaps = 10/234 (4%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE+G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 1 MGRTS-KDKRDVYYRLAKENGWRARSAFKLLQLDEEFQLFKGVKRAVDLCAAPGSWSQVL 59
Query: 61 VQRV-PVGS-LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
Q+V GS V+ +DL +AP+ G + ++ DIT+ + K++++ DLV+ D
Sbjct: 60 SQKVGGQGSGQVVAVDLQAMAPLPGVIQIQGDITQ---LSTAKEIIQHFEGCPADLVVCD 116
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+P+V G + Q L++ ++ +AT L G FV K+FR +D + + L+ F
Sbjct: 117 GAPDVTGLHDVDEYMQAQLLLAALNIATHVLKLGGCFVAKIFRGRDVTLLYSQLRIFFSS 176
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDP----RLLDVKYLFQGSVEPRKVV 228
V KP +SR++S E + + Y P P LL+ Y F P +V+
Sbjct: 177 VLCAKPKSSRNSSIEAFAVCQGYDPPEGFIPDLTRPLLNHSYDFNQLDGPTRVI 230
>gi|195390727|ref|XP_002054019.1| GJ23026 [Drosophila virilis]
gi|194152105|gb|EDW67539.1| GJ23026 [Drosophila virilis]
Length = 313
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 118/222 (53%), Gaps = 10/222 (4%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+ ++ +F L +DLCAAPG W QV
Sbjct: 1 MGKTS-KDKRDIYYRQAKEEGWRARSAFKLMHINEQFGILNDVRRAVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGSL---------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRA 111
+++ L ++ +DL +APIRG + L+ DITK + +
Sbjct: 60 SRKLFDSCLTDDEKSEVKIIAVDLQAMAPIRGVIQLQGDITKESTAEAIIAHFGNDADQK 119
Query: 112 FDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYC 171
LV+ DG+P+V G + QN L++ ++ +AT L GTFV K+F+ S +
Sbjct: 120 AQLVVCDGAPDVTGVHEMDEYMQNQLIVSALSIATFVLETGGTFVAKIFKGNANSLLESQ 179
Query: 172 LKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLD 213
+ FE + KP +SR +S E +++ ++ P P++++
Sbjct: 180 MLTFFENFHIYKPPSSRPSSIEAFVVCTGFRLPIGYIPQIIN 221
>gi|354594103|ref|ZP_09012146.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Commensalibacter intestini A911]
gi|353673214|gb|EHD14910.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Commensalibacter intestini A911]
Length = 236
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 114/193 (59%), Gaps = 6/193 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y R A++ G+RSRA++KL++LD KF FLR V+DL AAPGGW QVAV R + V
Sbjct: 47 DPYVRAAQQQGWRSRAAFKLIELDEKFKFLRPGLKVVDLGAAPGGWSQVAVFR--KATKV 104
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL+ + PI GA ++ D T PE + ++ + G +A DLV+ D +PN G A +
Sbjct: 105 VGIDLLAVDPIPGAEIIQGDFTDPE---NMDILINKLGGKA-DLVMSDMAPNTTGHAATD 160
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ L D++ A L +G F+ KVF+ +L LK+ F+ V+ KP ASR
Sbjct: 161 HIRIIDLTKDALIFALDILNLQGIFIAKVFQGGSEKEMLDTLKKSFKVVKHAKPPASRKE 220
Query: 191 SAEIYLLGIKYKA 203
S E+Y++ +K
Sbjct: 221 SKELYVIATGFKG 233
>gi|444518695|gb|ELV12328.1| Putative ribosomal RNA methyltransferase 1 [Tupaia chinensis]
Length = 339
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/228 (35%), Positives = 126/228 (55%), Gaps = 12/228 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE+G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 1 MGRTS-KDKRDVYYRLAKENGWRARSAFKLLQLDEEFQLFQGVARAVDLCAAPGSWSQVL 59
Query: 61 VQRV----PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
Q+ P V+ +DL +AP+ G + ++ DIT+ + K++++ DLV+
Sbjct: 60 SQKFGGQGP--GHVVAVDLQAMAPLPGVIQIQGDITQ---LSTAKEIIQHFEGCPADLVV 114
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
DG+P+V G + Q L++ ++ +AT L P G FV K+FR +D + + L+ F
Sbjct: 115 CDGAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLRVFF 174
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEP 224
V KP +SR++S E + + Y P P L K L S +P
Sbjct: 175 SSVLCAKPRSSRNSSIEAFAVCQGYDPPEGFMPDL--TKPLLDHSYDP 220
>gi|339021231|ref|ZP_08645339.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter tropicalis NBRC 101654]
gi|338751669|dbj|GAA08643.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter tropicalis NBRC 101654]
Length = 265
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 109/192 (56%), Gaps = 6/192 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y + A + G+RSRA++KL++LD +F ++ V+DL AAPGGW QV V+R V
Sbjct: 70 DPYVQAAHKQGWRSRAAFKLIELDDRFHLIKPGMRVVDLGAAPGGWTQVIVKR--GAERV 127
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL+P+ P+ GA +E D T P R+ +++ DLVL D +PN G +
Sbjct: 128 VGVDLLPVDPVAGAEIIEGDFTDPTMAERLTSLLDGKA----DLVLSDMAPNTTGHGPTD 183
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
M L +++ A + LA G FV KVF+ +L LKQ F +V KP ASR
Sbjct: 184 HMRIIGLAQEALYFAFEILAEGGGFVAKVFQGGSEKEMLDTLKQAFTQVRHAKPPASRKD 243
Query: 191 SAEIYLLGIKYK 202
S+E+Y++ ++
Sbjct: 244 SSELYVVATGFR 255
>gi|159904677|ref|YP_001548339.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcus
maripaludis C6]
gi|226703310|sp|A9A6B9.1|RLME_METM6 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|159886170|gb|ABX01107.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcus
maripaludis C6]
Length = 258
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 109/193 (56%), Gaps = 6/193 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D YY LAK+ YRSRA++KL QL+ KF+ ++ + V+DL APGGW+Q A V +
Sbjct: 15 DHYYNLAKKRNYRSRATYKLFQLNEKFNLIKERNVVVDLGCAPGGWLQAARDIVGDKGFI 74
Query: 71 LGLDLVPIAPI--RGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWA 128
+G+DL + P+ ++++ D+TK E + + ++ E D+++ D SPN+ G W
Sbjct: 75 VGIDLQTVKPLPYENVIAIKGDMTKEEILKQARDLLPEKP----DVIICDASPNISGVWD 130
Query: 129 QEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASR 188
+ L ++ AT+ L G FV KVF+ + + + + F+K KP ASR
Sbjct: 131 VDHARSLELTTMALMTATKMLKRGGNFVVKVFQGDLFEKYVQLVSEYFDKAFTTKPRASR 190
Query: 189 SASAEIYLLGIKY 201
SAE+Y++G ++
Sbjct: 191 DESAEVYVIGKRF 203
>gi|380026219|ref|XP_003696852.1| PREDICTED: LOW QUALITY PROTEIN: putative ribosomal RNA
methyltransferase 1-like [Apis florea]
Length = 369
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 123/225 (54%), Gaps = 16/225 (7%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+Q+D++ L + +DLCAAPG W QV
Sbjct: 1 MGKT-SKDKRDIYYRRAKEEGWRARSAFKLLQIDNECHILDGVNKAVDLCAAPGSWSQVL 59
Query: 61 VQRV------------PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHG 108
+R+ + ++ +DL +AP+ G + ++ DIT + K+++
Sbjct: 60 SRRLNENYKKALEAGNAIPPKIVAVDLQAMAPLEGVIQIQGDITNID---TAKQIISHFD 116
Query: 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSV 168
DLV+ DG+P+V G + Q+ L++ ++ + T L GTFV K+FR++D + +
Sbjct: 117 NEQADLVVCDGAPDVTGLHDMDIYIQSQLLLAALNITTHILRQGGTFVAKIFRAKDVTLL 176
Query: 169 LYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLD 213
LK F V P++SR++S E +++ Y P P +++
Sbjct: 177 YAQLKIFFPYVYCTXPSSSRNSSIEAFVVCKDYSPPEGYKPHMMN 221
>gi|195438774|ref|XP_002067307.1| GK16249 [Drosophila willistoni]
gi|194163392|gb|EDW78293.1| GK16249 [Drosophila willistoni]
Length = 306
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 121/222 (54%), Gaps = 10/222 (4%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYRLAKE G+R+R+++KL+ +D F V+DLCAAPG W QV
Sbjct: 1 MGKTS-KDKRDVYYRLAKEEGWRARSAFKLMHIDDAFKIFSGVKRVVDLCAAPGSWSQVL 59
Query: 61 VQRV---------PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRA 111
+++ ++ +DL +APIRG + L+ DITK + + E +
Sbjct: 60 SRKLYDTCETDEEKANVKIIAVDLQAMAPIRGVIQLQGDITKESTAEAIIEHFGEGVEQK 119
Query: 112 FDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYC 171
LV+ DG+P+V G + Q+ L++ ++ +AT L P G+FV K+F+ D + +
Sbjct: 120 AQLVVCDGAPDVTGVHEMDEYMQHQLLVSALSIATFVLEPGGSFVAKIFKGNDTTLLDSQ 179
Query: 172 LKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLD 213
++ F+ E KP +SR +S E +++ + P P++++
Sbjct: 180 MRTFFKHFEYYKPLSSRPSSIEHFVVCRDFFLPPGYIPQVIN 221
>gi|46877062|ref|NP_598752.2| Ftsj homolog [Mus musculus]
gi|26331300|dbj|BAC29380.1| unnamed protein product [Mus musculus]
Length = 324
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 122/213 (57%), Gaps = 6/213 (2%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE+G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 1 MGRTS-KDKRDVYYRLAKENGWRARSAFKLLQLDEEFQLFKGVKRAVDLCAAPGSWSQVL 59
Query: 61 VQRV-PVGS-LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
Q+V GS V+ +DL +AP+ G + ++ DIT+ + K++++ DLV+ D
Sbjct: 60 SQKVGGQGSGQVVAVDLQAMAPLPGVIQIQGDITQ---LSTAKEIIQHFEGCPADLVVCD 116
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+P+V G + Q L++ ++ +AT L G FV K+FR +D + + L+ F
Sbjct: 117 GAPDVTGLHDVDEYMQAQLLLAALNIATHVLKLGGCFVAKIFRGRDVTLLYSQLRIFFSS 176
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
V KP +SR++S E + + Y P P L
Sbjct: 177 VLCAKPKSSRNSSIEAFAVCQGYDPPEGFIPDL 209
>gi|55726462|emb|CAH90000.1| hypothetical protein [Pongo abelii]
Length = 319
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 122/213 (57%), Gaps = 6/213 (2%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE+G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 1 MGRTS-KDKRDVYYRLAKENGWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVL 59
Query: 61 VQRV-PVGS-LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
Q++ GS V+ +DL +AP+ G V ++ DIT+ + K++++ DLV+
Sbjct: 60 SQKIGGQGSGHVVAVDLQAMAPLPGVVQIQGDITQ---LSTAKEIIQHFKGCPADLVVCG 116
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+P+V G + Q L++ ++ +AT L P G FV K+FR +D + + L+ F
Sbjct: 117 GAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLQVFFSS 176
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
V KP +SR++S E + + Y P P L
Sbjct: 177 VLCAKPRSSRNSSIEAFAVCQGYDPPEGFIPDL 209
>gi|88705677|ref|ZP_01103387.1| Ribosomal RNA large subunit methyltransferase J [Congregibacter
litoralis KT71]
gi|88700190|gb|EAQ97299.1| Ribosomal RNA large subunit methyltransferase J [Congregibacter
litoralis KT71]
Length = 206
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 114/191 (59%), Gaps = 3/191 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+HR D Y + A+ GYRSRA +KL++L + + +R VLDL +APGGW QVA + V
Sbjct: 14 EHRDDPYVQQAQRDGYRSRACYKLLELQERDNIIRPGMTVLDLGSAPGGWSQVAAELVGK 73
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ D++P+ PI G ++ D T+ + ++++ E G ++ DLV+ D +PN+ G
Sbjct: 74 RGQVIASDILPMDPIDGVNFVQGDFTEDQV---FEQILAEMGDKSADLVISDMAPNMSGV 130
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
A + LV ++ +AT+ L P G F+TKVF+ + + + ++ F+KV KP+A
Sbjct: 131 SAVDQPKSIYLVELALDMATRVLVPGGAFITKVFQGEGFDELFRATREQFDKVLTRKPSA 190
Query: 187 SRSASAEIYLL 197
SR S E+YL+
Sbjct: 191 SRPRSREVYLV 201
>gi|55250314|gb|AAH85449.1| FtsJ homolog 1 (E. coli) [Danio rerio]
gi|182890610|gb|AAI64849.1| Ftsj1 protein [Danio rerio]
Length = 323
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 122/225 (54%), Gaps = 13/225 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE G+R+R+++KL+QLD +F R +DLCAAPG W QV
Sbjct: 1 MGR-SSKDKRDIYYRLAKEEGWRARSAFKLLQLDEEFKLFRGVSRAVDLCAAPGSWSQVL 59
Query: 61 VQRV-----PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV 115
+++ ++ +DL +AP+ G ++ DITK + ++++ + DLV
Sbjct: 60 SRKLRGKDKSEEVKIVAVDLQAMAPLPGVTQIQGDITK---ISTAEEIIRHFEGESADLV 116
Query: 116 LHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL 175
+ DG+P+V G + Q L++ ++ + T L P G FV K+FR +D + + LK
Sbjct: 117 VCDGAPDVTGLHDVDEYIQAQLLLAALNITTHVLKPGGNFVAKIFRGKDVTLLYSQLKIF 176
Query: 176 FEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPR----LLDVKY 216
F V KP +SR++S E +++ Y P P LLD Y
Sbjct: 177 FSFVTCAKPPSSRNSSIEAFVVCQNYSPPEGYVPNMSNPLLDHSY 221
>gi|340779414|ref|ZP_08699357.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter aceti NBRC 14818]
Length = 218
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 112/193 (58%), Gaps = 6/193 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y A + G+RSRA++KL+++D +F ++ V+DL AAPGGW QVAV+R S V
Sbjct: 18 DPYVAAAHKQGWRSRAAFKLIEIDDRFHLIKPGQRVVDLGAAPGGWTQVAVKR--GASHV 75
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL+P+ P+ GA +E D T PE R ++E G +A DLVL D +PN G +
Sbjct: 76 IGVDLLPVDPVAGAEIIEGDFTDPELPDR---LIEMLGGKA-DLVLSDMAPNTTGHAPTD 131
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
M L ++ A LA G F+ KVF+ +L +K+LF V KP ASR
Sbjct: 132 HMRIIGLAEGALDFAFDVLAEGGGFIAKVFQGGSEKQMLEPMKKLFASVRHVKPPASRKD 191
Query: 191 SAEIYLLGIKYKA 203
S+E+Y++ +++
Sbjct: 192 SSELYVVATGFRS 204
>gi|254582987|ref|XP_002499225.1| ZYRO0E06952p [Zygosaccharomyces rouxii]
gi|238942799|emb|CAR30970.1| ZYRO0E06952p [Zygosaccharomyces rouxii]
Length = 291
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 118/218 (54%), Gaps = 11/218 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHA--VLDLCAAPGGWMQ 58
MGK K + D YYR AKE GYR+R+++KL+QL+ +F FL + V+DLCAAPG W Q
Sbjct: 1 MGK-SSKDKRDLYYRKAKEQGYRARSAFKLLQLNEEFHFLDDPNLKRVVDLCAAPGSWSQ 59
Query: 59 VAVQRV-----PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFD 113
V +++ ++ +DL + PI +L+ DIT P + +++E G D
Sbjct: 60 VLSRKLFDKDDYTDRQIVAVDLQAMMPIDHVTTLQADITHPR---TLHQILELFGNHRAD 116
Query: 114 LVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLK 173
V DG+P+V G + Q L++ +++L L GTFV K+FR +D + L
Sbjct: 117 FVCSDGAPDVTGLHDLDEYVQQQLIMSALQLTVCILKRGGTFVAKIFRGRDIDLIYAQLG 176
Query: 174 QLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
LF++V KP +SR +S E +++ Y P P L
Sbjct: 177 YLFDQVTCAKPRSSRGSSLEAFVVCQGYNPPEGWQPSL 214
>gi|53803869|ref|YP_114286.1| ribosomal RNA large subunit methyltransferase J [Methylococcus
capsulatus str. Bath]
gi|81681781|sp|Q607B2.1|RLME_METCA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|53757630|gb|AAU91921.1| ribosomal RNA large subunit methyltransferase J [Methylococcus
capsulatus str. Bath]
Length = 210
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 111/202 (54%), Gaps = 3/202 (1%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
G+ +H D+Y RLA+E GYRSRA +KL++LD V+DL AAPGGW Q A
Sbjct: 9 GRWLAEHFSDEYVRLAQEKGYRSRAVFKLMELDEHDRLFAPGTTVIDLGAAPGGWSQYAA 68
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+RV VL LD++P+ P+ G ++ D A ++E G R D+VL D +P
Sbjct: 69 RRVGASGRVLALDMLPMEPLPGVTVVQGDFLDD---AVFHAMLEAIGGRRVDVVLSDMAP 125
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
N+ G + L + LA + L PKG+FV K+F+ + + + ++ F V +
Sbjct: 126 NMSGNRNVDQPRSMYLAELAFDLAERVLGPKGSFVVKLFQGEGFQEYVARARKAFGSVGM 185
Query: 182 DKPAASRSASAEIYLLGIKYKA 203
KP ASR+ SAEIYL+G Y+
Sbjct: 186 RKPKASRARSAEIYLVGKGYRG 207
>gi|344250012|gb|EGW06116.1| Putative ribosomal RNA methyltransferase 1 [Cricetulus griseus]
Length = 330
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 124/222 (55%), Gaps = 10/222 (4%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE+G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 1 MGRTS-KDKRDVYYRLAKENGWRARSAFKLLQLDEEFQLFQGVKRAVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGS--LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
Q++ S V+ +DL +AP+ G + ++ DIT+ + K++++ DLV+ D
Sbjct: 60 SQKIGGQSSGQVVAVDLQAMAPLPGVIQIQGDITQ---LSTAKEIIQHFEGCPADLVVCD 116
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+P+V G + Q L++ ++ +AT L G FV K+FR +D + + L+ F
Sbjct: 117 GAPDVTGLHDVDEYMQAQLLLAALNIATHVLKLGGCFVAKIFRGRDVTLLYGQLRVFFSS 176
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDP----RLLDVKY 216
V KP +SR++S E + + Y P P LLD Y
Sbjct: 177 VLCAKPKSSRNSSIEAFAVCQGYDPPEGFIPDLTRPLLDYSY 218
>gi|354485981|ref|XP_003505160.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like
[Cricetulus griseus]
Length = 329
Score = 129 bits (324), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 124/222 (55%), Gaps = 10/222 (4%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE+G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 1 MGRTS-KDKRDVYYRLAKENGWRARSAFKLLQLDEEFQLFQGVKRAVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGS--LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
Q++ S V+ +DL +AP+ G + ++ DIT+ + K++++ DLV+ D
Sbjct: 60 SQKIGGQSSGQVVAVDLQAMAPLPGVIQIQGDITQ---LSTAKEIIQHFEGCPADLVVCD 116
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+P+V G + Q L++ ++ +AT L G FV K+FR +D + + L+ F
Sbjct: 117 GAPDVTGLHDVDEYMQAQLLLAALNIATHVLKLGGCFVAKIFRGRDVTLLYGQLRVFFSS 176
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDP----RLLDVKY 216
V KP +SR++S E + + Y P P LLD Y
Sbjct: 177 VLCAKPKSSRNSSIEAFAVCQGYDPPEGFIPDLTRPLLDYSY 218
>gi|426238257|ref|XP_004013071.1| PREDICTED: pre-rRNA processing protein FTSJ3 [Ovis aries]
Length = 833
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 125/211 (59%), Gaps = 21/211 (9%)
Query: 593 GPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQRE 652
G K H SE + FE+VP +D D E ++A +KK R
Sbjct: 620 GKKRGHGPKSEDDDGFEVVPI------EDPVKHRILDPEGLALGAVIASSKKAKR----- 668
Query: 653 QILDDAYNRYMFDDDG--LPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKV 710
++DD+++RY F++D LPDWF++EE++HR PV K+E+ + +++EI+ARP KKV
Sbjct: 669 DLIDDSFSRYTFNEDEGELPDWFVQEEKQHRIRQLPVDKKEVEHYRKRWREINARPIKKV 728
Query: 711 AEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKE--YVV 768
AEAKARKKR ++KLE+ +KKA + + DIS+R K Q+ LYK A + K++ YVV
Sbjct: 729 AEAKARKKRRMLKKLEQTKKKAEAVVNTVDISEREKVAQLRSLYKKAGLGKEKRQVTYVV 788
Query: 769 AKKGV--QVRAGKGKV----LVDPRMKKDSR 793
AKKGV +VR G +VD RMKKD R
Sbjct: 789 AKKGVGRKVRRPAGVRGHFKVVDSRMKKDQR 819
>gi|449015651|dbj|BAM79053.1| probable tRNA methyltransferase Trm7 [Cyanidioschyzon merolae
strain 10D]
Length = 249
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 117/200 (58%), Gaps = 11/200 (5%)
Query: 5 KGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV 64
+ K + D YYR AKE G+R+R+++KL+QLD +F V DLCAAPG W QV Q++
Sbjct: 3 RSKDKRDVYYRKAKEEGFRARSAFKLLQLDDEFGIFTGVRTVADLCAAPGSWSQVVSQKL 62
Query: 65 PV------GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
+ G+ + +DL IAPI G +L+ DIT+ + RV+ + G R DLVL D
Sbjct: 63 RLPESASEGNCAVAVDLQDIAPIPGVCTLQGDITQEDTLERVRCAL---GGRRADLVLSD 119
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYC-LKQLFE 177
G+P+V G + Q LV +++ LA G FV K+FR + S++LY ++ F
Sbjct: 120 GAPDVTGLHDLDEYVQCELVQAALRFCVAMLAEGGKFVAKIFRGYE-SALLYARIRPYFR 178
Query: 178 KVEVDKPAASRSASAEIYLL 197
++ + KP +SR++S E +++
Sbjct: 179 ELYIAKPRSSRNSSLESFIV 198
>gi|356549337|ref|XP_003543050.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like [Glycine
max]
Length = 313
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 125/225 (55%), Gaps = 25/225 (11%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK R D YYR AKE G+R+R+++KL+Q+D +F+ V+DLCAAPG W QV
Sbjct: 1 MGKASRDKR-DIYYRKAKEEGWRARSAFKLLQIDEEFNLFEGVKRVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGS------------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEH- 107
+++ + + L++ +DL P+API G + ++ DIT AR +V+ H
Sbjct: 60 SRKLYLPAKLAPDAKDENLPLIVAIDLQPMAPIEGVIQVQGDITN----ARTAEVVIRHF 115
Query: 108 -GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYS 166
G +A DLV+ DG+P+V G + Q+ L++ + + T L G +FR +D +
Sbjct: 116 DGCKA-DLVVCDGAPDVTGLHDMDEFVQSQLILPGLTIVTHVLKEGGKL---IFRGKD-T 170
Query: 167 SVLYC-LKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPR 210
S+LYC LK F V KP +SR++S E + + Y P +P+
Sbjct: 171 SLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPK 215
>gi|163797468|ref|ZP_02191419.1| 23S rRNA methylase [alpha proteobacterium BAL199]
gi|159177217|gb|EDP61776.1| 23S rRNA methylase [alpha proteobacterium BAL199]
Length = 251
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 116/200 (58%), Gaps = 6/200 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV--PVGS 68
D + +K GYRSRA++KL+QL+ +F+FLR V+DL AAPGGW Q++V RV P
Sbjct: 56 DPFVAESKRLGYRSRAAFKLIQLNERFNFLRPGARVVDLGAAPGGWTQISVDRVGAPGRG 115
Query: 69 LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWA 128
LV+GLD++P+ PI GA +E D + ++K G+ D+VL D + G
Sbjct: 116 LVVGLDILPVEPIAGATLIEADFMADDAPQQIKAA--TGGL--VDVVLSDMAAQTTGHPQ 171
Query: 129 QEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASR 188
+ + L + + A + LAP+GTFV KVF+ +++L +K+ F+ V KP ASR
Sbjct: 172 TDHLRIVGLCEAAFEFALEVLAPEGTFVAKVFQGGSETAMLARMKRAFKAVRHAKPPASR 231
Query: 189 SASAEIYLLGIKYKAPAKID 208
+ SAE Y++ ++ + D
Sbjct: 232 AESAETYVVATGFRGEPETD 251
>gi|284162072|ref|YP_003400695.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Archaeoglobus profundus
DSM 5631]
gi|284012069|gb|ADB58022.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Archaeoglobus profundus
DSM 5631]
Length = 202
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 110/194 (56%), Gaps = 8/194 (4%)
Query: 9 RLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGS 68
R D YY AK+ GYRSRAS+KL+Q++ F ++ VLDL A+PGGW QVAV+ +G+
Sbjct: 4 RRDYYYWQAKKLGYRSRASFKLIQMNRTFKLIKEGDWVLDLGASPGGWSQVAVE---LGA 60
Query: 69 LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWA 128
V+ +D+ P+ PI G + DIT+ E +K V R +D+VL D SP + G W
Sbjct: 61 KVVAVDINPMEPIEGVHFIRGDITREETLEEIKSVR-----RYYDVVLSDASPKISGKWT 115
Query: 129 QEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASR 188
+ + L + K+A + L G FV KVF+ ++ ++ K+ F + P ASR
Sbjct: 116 IDHLLSIDLARSAFKIAREVLKDGGNFVVKVFQGEEIQNLFNEFKRFFRFKKFHSPKASR 175
Query: 189 SASAEIYLLGIKYK 202
SAEIY +G +K
Sbjct: 176 KQSAEIYFVGKGFK 189
>gi|319763183|ref|YP_004127120.1| ribosomal RNA methyltransferase rrmj/ftsj [Alicycliphilus
denitrificans BC]
gi|330825246|ref|YP_004388549.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Alicycliphilus
denitrificans K601]
gi|317117744|gb|ADV00233.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Alicycliphilus
denitrificans BC]
gi|329310618|gb|AEB85033.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Alicycliphilus
denitrificans K601]
Length = 220
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 113/206 (54%), Gaps = 11/206 (5%)
Query: 8 HRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVG 67
H D Y +LA++ GYR+RA++KL ++D +F ++ H V+DL ++PG W Q +R+ G
Sbjct: 18 HVNDTYVKLAQKEGYRARAAYKLKEIDEQFGLIKPGHVVVDLGSSPGAWSQYVRRRLSPG 77
Query: 68 SLVLG--------LDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDG 119
+G LD++P+ PI G L+ D E AR+++ ++ R D+V+ D
Sbjct: 78 GAAMGQLDGTIISLDILPMEPIEGVTFLQGDFRDEEVLARLQQAVQG---RPVDVVVSDM 134
Query: 120 SPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKV 179
+PN+ G + +A+ L+ +V A L P G V K+F Y+ ++ K F V
Sbjct: 135 APNLSGVESVDAVRIAHLIELAVDFAVHHLKPDGALVVKLFHGSGYTQLVQLFKDTFRVV 194
Query: 180 EVDKPAASRSASAEIYLLGIKYKAPA 205
+ KP ASR S+E +L+GI K PA
Sbjct: 195 KPVKPKASRDKSSETFLVGIGLKHPA 220
>gi|383640200|ref|ZP_09952606.1| ribosomal RNA large subunit methyltransferase E [Sphingomonas
elodea ATCC 31461]
Length = 230
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 110/196 (56%), Gaps = 5/196 (2%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y R AK GYRSRA++KL +LD KF FL+ + V+DL APGGW QV V+RV + V
Sbjct: 32 DPYVRRAKAEGYRSRAAYKLTELDEKFGFLKGARRVVDLGVAPGGWTQV-VRRVLPKAAV 90
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL+P+ PI GA L+ D R+ + + DL+L D + N G +
Sbjct: 91 VGIDLLPVDPIEGATLLQMDFMDDAAPDRLIEALGGTP----DLILSDMAANTVGHPQTD 146
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
A+ ALV + A + LAP G FV KVF S+++ +K+ F V+ KP ASR
Sbjct: 147 ALRTMALVETAFDFAIRTLAPGGDFVAKVFAGGADSALIAEMKRAFTTVKHAKPPASRKG 206
Query: 191 SAEIYLLGIKYKAPAK 206
S E Y++ +K A+
Sbjct: 207 SVEWYVVAQGFKGRAE 222
>gi|298400883|gb|ADI81761.1| cell division protein [Heliconius melpomene melpomene]
Length = 273
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 128/229 (55%), Gaps = 17/229 (7%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
K + D YYRLAKE G+R+R+++KL+Q++ +++ +DLCAAPG W QV +++
Sbjct: 3 KDKRDIYYRLAKEEGWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQVLTKKLRQ 62
Query: 67 GSL------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
+ ++ +DL +A + G ++ DITK + K E G++A DLV+ DG+
Sbjct: 63 NTSNTDDVKIVAVDLQAMAALPGVKQIQGDITKISTAHEIIK--EFEGLKA-DLVVCDGA 119
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
P+V G + Q+ L++ ++ + T L G FV K+FR +D + + LK F+ V
Sbjct: 120 PDVTGLHDIDEYVQSQLLLAALNITTHILKEGGVFVAKIFRGKDVTLLYSQLKLFFDYVT 179
Query: 181 VDKPAASRSASAEIYLLGIKYKAPAKIDPR----LLDVKYL----FQGS 221
V KP +SR++S E +++ YKAP P LLD KY F GS
Sbjct: 180 VSKPRSSRNSSIEAFVICQNYKAPPGYVPTMVNPLLDHKYCNFNQFTGS 228
>gi|427779071|gb|JAA54987.1| Putative sam-dependent methyltransferase/cell division protein ftsj
[Rhipicephalus pulchellus]
Length = 611
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 120/210 (57%), Gaps = 10/210 (4%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE G+R+R+++KL+Q++ +F +DLCAAPG W QV
Sbjct: 1 MGR-SSKDKRDVYYRLAKEEGWRARSAFKLLQINEEFDIFTGVTKAVDLCAAPGSWSQVL 59
Query: 61 VQRV------PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114
+++ P ++ +DL +AP+ G + L+ DIT E K + G +A DL
Sbjct: 60 SRKLRGNAQNPDDVKIVAVDLQAMAPLPGVIQLQGDIT--EVTTAQKIIGHFQGEKA-DL 116
Query: 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQ 174
V+ DG+P+V G + Q L++ ++ + T L GT++ K+FR +D + + LK
Sbjct: 117 VVCDGAPDVTGLHDIDEYIQAELLLSALNITTHVLKTGGTYIAKIFRGKDVTLLYAQLKL 176
Query: 175 LFEKVEVDKPAASRSASAEIYLLGIKYKAP 204
FE V V KP +SR++S E +++ +Y P
Sbjct: 177 FFEHVTVAKPRSSRNSSIESFVVCRRYSPP 206
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 118/220 (53%), Gaps = 15/220 (6%)
Query: 14 YRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV------PVG 67
Y E G+R+R+++KL+Q++ +F +DLCAAPG W QV +++ P
Sbjct: 203 YSPPXEEGWRARSAFKLLQINEEFDIFTGVTKAVDLCAAPGSWSQVLSRKLRGNAQNPDD 262
Query: 68 SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAW 127
++ +DL +AP+ G + L+ DIT E K + G +A DLV+ DG+P+V G
Sbjct: 263 VKIVAVDLQAMAPLPGVIQLQGDIT--EVTTAQKIIGHFQGEKA-DLVVCDGAPDVTGLH 319
Query: 128 AQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAAS 187
+ Q L++ ++ + T L GT++ K+FR +D + + LK FE V V KP +S
Sbjct: 320 DIDEYIQAELLLSALNITTHVLKTGGTYIAKIFRGKDVTLLYAQLKLFFEHVTVAKPRSS 379
Query: 188 RSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKV 227
R++S E +++ +Y P P + F GS+E K+
Sbjct: 380 RNSSIESFVVCRRYSPPEGYKP------FTFSGSMEDLKI 413
>gi|298400955|gb|ADI81797.1| cell division protein [Heliconius cydno cordula]
gi|298400957|gb|ADI81798.1| cell division protein [Heliconius cydno cordula]
gi|298400961|gb|ADI81800.1| cell division protein [Heliconius cydno cordula]
gi|298400969|gb|ADI81804.1| cell division protein [Heliconius cydno cordula]
gi|298400971|gb|ADI81805.1| cell division protein [Heliconius cydno cordula]
Length = 273
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 128/229 (55%), Gaps = 17/229 (7%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
K + D YYRLAKE G+R+R+++KL+Q++ +++ +DLCAAPG W QV +++
Sbjct: 3 KDKRDIYYRLAKEEGWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQVLTKKLRQ 62
Query: 67 GSL------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
+ ++ +DL +A + G ++ DITK + K E G++A DLV+ DG+
Sbjct: 63 NTSNTDDVKIVAVDLQAMAALPGVKQIQGDITKNSTAHEIIKEFE--GLKA-DLVVCDGA 119
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
P+V G + Q+ L++ ++ + T L G FV K+FR +D + + LK F+ V
Sbjct: 120 PDVTGLHDIDEYVQSQLLLAALNITTHVLKEGGVFVAKIFRGKDVTLLYSQLKLFFDYVT 179
Query: 181 VDKPAASRSASAEIYLLGIKYKAPAKIDPR----LLDVKYL----FQGS 221
V KP +SR++S E +++ YKAP P LLD KY F GS
Sbjct: 180 VSKPRSSRNSSIEAFVICQNYKAPPGYVPTMVNPLLDHKYCNFNQFTGS 228
>gi|340378876|ref|XP_003387953.1| PREDICTED: hypothetical protein LOC100633473 [Amphimedon
queenslandica]
Length = 394
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 103/155 (66%), Gaps = 11/155 (7%)
Query: 649 KQREQILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAK 708
K+R+ +++ YNR+ DD LPDWF E+E H Q P+TK+ + + + KEI+ARP K
Sbjct: 229 KKRQDLIESGYNRWTSDDPNLPDWFREDESSHCQKQLPITKDMVDKYRKKLKEINARPIK 288
Query: 709 KVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKK---E 765
K+AEAKARKK+ A RKL K R+KA VI D D++D+ K +QI+ +YK A KK +
Sbjct: 289 KIAEAKARKKQRAARKLTKAREKARVICDTPDVTDQKKVRQIKGIYKKAGLASSKKRDVQ 348
Query: 766 YVVAKKGVQVR-------AGKGKVLVDPRMKKDSR 793
YVVAK+G+ R +G+ KV VDPRMKKD+R
Sbjct: 349 YVVAKRGLGKRVKRPAGVSGRFKV-VDPRMKKDNR 382
>gi|114798748|ref|YP_760506.1| putative ribosomal RNA large subunit methyltransferase J
[Hyphomonas neptunium ATCC 15444]
gi|123028016|sp|Q0C187.1|RLME_HYPNA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|114738922|gb|ABI77047.1| putative ribosomal RNA large subunit methyltransferase J
[Hyphomonas neptunium ATCC 15444]
Length = 234
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 110/192 (57%), Gaps = 6/192 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y R AK+ GYRSRA++KL+++D+ LR V+DL APGGW+QV++Q+ + V
Sbjct: 48 DPYVRKAKDEGYRSRAAYKLLEIDAAAKILRKGMRVVDLGCAPGGWIQVSLQQ--GAAEV 105
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL+P+ PI GA +E D+ P+ AR+ + DL+L D + N G +
Sbjct: 106 VGIDLLPLDPIEGATIIEGDVNNPDDVARMMAGLSG----TPDLILSDMAANTTGHKQTD 161
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ ALV +V A + L G F KVF+ VL LKQ F V+ KPAASR+
Sbjct: 162 HLRTVALVEMAVAFAIEHLDDGGAFCAKVFQGGATKDVLNLLKQHFRTVKHIKPAASRAG 221
Query: 191 SAEIYLLGIKYK 202
S EIY++ ++
Sbjct: 222 SPEIYVVAKGFR 233
>gi|298400869|gb|ADI81754.1| cell division protein [Heliconius melpomene melpomene]
gi|298400871|gb|ADI81755.1| cell division protein [Heliconius melpomene melpomene]
gi|298400873|gb|ADI81756.1| cell division protein [Heliconius melpomene melpomene]
gi|298400877|gb|ADI81758.1| cell division protein [Heliconius melpomene melpomene]
gi|298400879|gb|ADI81759.1| cell division protein [Heliconius melpomene melpomene]
gi|298400881|gb|ADI81760.1| cell division protein [Heliconius melpomene melpomene]
gi|298400885|gb|ADI81762.1| cell division protein [Heliconius melpomene melpomene]
gi|298400887|gb|ADI81763.1| cell division protein [Heliconius melpomene melpomene]
gi|298400889|gb|ADI81764.1| cell division protein [Heliconius melpomene melpomene]
gi|298400893|gb|ADI81766.1| cell division protein [Heliconius melpomene melpomene]
gi|298400897|gb|ADI81768.1| cell division protein [Heliconius melpomene melpomene]
gi|298400899|gb|ADI81769.1| cell division protein [Heliconius melpomene melpomene]
gi|298400901|gb|ADI81770.1| cell division protein [Heliconius melpomene melpomene]
gi|298400903|gb|ADI81771.1| cell division protein [Heliconius melpomene melpomene]
gi|298400905|gb|ADI81772.1| cell division protein [Heliconius melpomene melpomene]
gi|298400907|gb|ADI81773.1| cell division protein [Heliconius melpomene melpomene]
gi|298400909|gb|ADI81774.1| cell division protein [Heliconius heurippa]
gi|298400911|gb|ADI81775.1| cell division protein [Heliconius heurippa]
gi|298400913|gb|ADI81776.1| cell division protein [Heliconius heurippa]
gi|298400915|gb|ADI81777.1| cell division protein [Heliconius heurippa]
gi|298400917|gb|ADI81778.1| cell division protein [Heliconius heurippa]
gi|298400919|gb|ADI81779.1| cell division protein [Heliconius heurippa]
gi|298400921|gb|ADI81780.1| cell division protein [Heliconius heurippa]
gi|298400923|gb|ADI81781.1| cell division protein [Heliconius heurippa]
gi|298400925|gb|ADI81782.1| cell division protein [Heliconius heurippa]
gi|298400927|gb|ADI81783.1| cell division protein [Heliconius heurippa]
gi|298400929|gb|ADI81784.1| cell division protein [Heliconius heurippa]
gi|298400931|gb|ADI81785.1| cell division protein [Heliconius heurippa]
gi|298400933|gb|ADI81786.1| cell division protein [Heliconius heurippa]
gi|298400935|gb|ADI81787.1| cell division protein [Heliconius heurippa]
gi|298400937|gb|ADI81788.1| cell division protein [Heliconius heurippa]
gi|298400939|gb|ADI81789.1| cell division protein [Heliconius heurippa]
gi|298400941|gb|ADI81790.1| cell division protein [Heliconius heurippa]
gi|298400943|gb|ADI81791.1| cell division protein [Heliconius heurippa]
gi|298400945|gb|ADI81792.1| cell division protein [Heliconius heurippa]
gi|298400947|gb|ADI81793.1| cell division protein [Heliconius heurippa]
gi|298400949|gb|ADI81794.1| cell division protein [Heliconius cydno cordula]
gi|298400951|gb|ADI81795.1| cell division protein [Heliconius cydno cordula]
gi|298400953|gb|ADI81796.1| cell division protein [Heliconius cydno cordula]
gi|298400959|gb|ADI81799.1| cell division protein [Heliconius cydno cordula]
gi|298400963|gb|ADI81801.1| cell division protein [Heliconius cydno cordula]
gi|298400965|gb|ADI81802.1| cell division protein [Heliconius cydno cordula]
gi|298400967|gb|ADI81803.1| cell division protein [Heliconius cydno cordula]
gi|298400973|gb|ADI81806.1| cell division protein [Heliconius cydno cordula]
gi|298400975|gb|ADI81807.1| cell division protein [Heliconius cydno cordula]
gi|298400977|gb|ADI81808.1| cell division protein [Heliconius cydno cordula]
gi|298400979|gb|ADI81809.1| cell division protein [Heliconius cydno cordula]
gi|298400981|gb|ADI81810.1| cell division protein [Heliconius cydno cordula]
gi|298400983|gb|ADI81811.1| cell division protein [Heliconius cydno cordula]
gi|298400985|gb|ADI81812.1| cell division protein [Heliconius cydno cordula]
gi|298400987|gb|ADI81813.1| cell division protein [Heliconius cydno cordula]
Length = 273
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 128/229 (55%), Gaps = 17/229 (7%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
K + D YYRLAKE G+R+R+++KL+Q++ +++ +DLCAAPG W QV +++
Sbjct: 3 KDKRDIYYRLAKEEGWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQVLTKKLRQ 62
Query: 67 GSL------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
+ ++ +DL +A + G ++ DITK + K E G++A DLV+ DG+
Sbjct: 63 NTSNTDDVKIVAVDLQAMAALPGVKQIQGDITKISTAHEIIK--EFEGLKA-DLVVCDGA 119
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
P+V G + Q+ L++ ++ + T L G FV K+FR +D + + LK F+ V
Sbjct: 120 PDVTGLHDIDEYVQSQLLLAALNITTHVLKEGGVFVAKIFRGKDVTLLYSQLKLFFDYVT 179
Query: 181 VDKPAASRSASAEIYLLGIKYKAPAKIDPR----LLDVKYL----FQGS 221
V KP +SR++S E +++ YKAP P LLD KY F GS
Sbjct: 180 VSKPRSSRNSSIEAFVICQNYKAPPGYVPTMVNPLLDHKYCNFNQFTGS 228
>gi|298400891|gb|ADI81765.1| cell division protein [Heliconius melpomene melpomene]
Length = 273
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 128/229 (55%), Gaps = 17/229 (7%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
K + D YYRLAKE G+R+R+++KL+Q++ +++ +DLCAAPG W QV +++
Sbjct: 3 KDKRDIYYRLAKEEGWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQVLTKKLRQ 62
Query: 67 GSL------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
+ ++ +DL +A + G ++ DITK + K E G++A DLV+ DG+
Sbjct: 63 NTPNTDDVKIVAVDLQAMAALPGVKQIQGDITKISTAHEIIK--EFEGLKA-DLVVCDGA 119
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
P+V G + Q+ L++ ++ + T L G FV K+FR +D + + LK F+ V
Sbjct: 120 PDVTGLHDIDEYVQSQLLLAALNITTHVLKEGGVFVAKIFRGKDVTLLYSQLKLFFDYVT 179
Query: 181 VDKPAASRSASAEIYLLGIKYKAPAKIDPR----LLDVKYL----FQGS 221
V KP +SR++S E +++ YKAP P LLD KY F GS
Sbjct: 180 VSKPRSSRNSSIEAFVICQNYKAPPGYVPTMVNPLLDHKYCNFNQFTGS 228
>gi|442758559|gb|JAA71438.1| Putative sam-dependent methyltransferase/cell division protein ftsj
[Ixodes ricinus]
Length = 310
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 146/279 (52%), Gaps = 36/279 (12%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE G+R+R+++KL+Q++ +F +DLCAAPG W QV
Sbjct: 1 MGR-SSKDKRDVYYRLAKEEGWRARSAFKLLQINEEFDIFSGVKKAVDLCAAPGSWSQVL 59
Query: 61 VQRV------PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114
+++ P ++ +DL +AP+ G + L+ DIT+ + +K++ DL
Sbjct: 60 SRKLRGNAENPDEVKIVAVDLQAMAPLPGVIQLQGDITE---ISTARKIINHFEGEKADL 116
Query: 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYC-LK 173
V+ DG+P+V G + Q L++ ++ + T L GT+V K+FR +D +++LY LK
Sbjct: 117 VVCDGAPDVTGLHDIDEYIQAELLLSALNITTHILKDGGTYVAKIFRGKD-TTLLYAQLK 175
Query: 174 QLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRG 233
F+ V V KP +SR++S E +++ Y P P +++ GS++
Sbjct: 176 LFFKHVVVAKPRSSRNSSIESFVVCQVYSPPEGYKP------FMYTGSLD---------- 219
Query: 234 TKQKRHRDGYEDGDTTLRKVSLATDFIWSNN----PLEI 268
R RD E+ + TL + D ++ PLE+
Sbjct: 220 ----RLRDAAEEPNRTLVPFVVCGDLAGFDSDRTYPLEL 254
>gi|449681403|ref|XP_002158962.2| PREDICTED: pre-rRNA processing protein FTSJ3-like [Hydra
magnipapillata]
Length = 263
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/182 (42%), Positives = 115/182 (63%), Gaps = 11/182 (6%)
Query: 637 EILACAKKMLRKKQREQ-ILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAM 695
E LA M+ K+R++ I+DDAYNRY F+D+GLP WF+E+E +H P+T+EE+
Sbjct: 81 EALALGTAMVTSKKRKRDIVDDAYNRYSFNDEGLPKWFIEDEVKHTVRHIPITREEVEFY 140
Query: 696 KAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYK 755
K + ++++ARP KKV EAKA+KK ++KL++ R+KA I D D R K++QI+ +YK
Sbjct: 141 KQRIRDLNARPIKKVIEAKAKKKSQMLKKLDRARRKAQGILDATDTGSREKQEQIKGIYK 200
Query: 756 SA---VPKRPKKEYVVAKKGVQVR------AGKGKV-LVDPRMKKDSRTHGSGKARKGGS 805
A K+ + YVVAKKG+ + KG+ +VDPRMKKD R + + KG
Sbjct: 201 RAGLLSKKKVETTYVVAKKGLAGKKYSRPDGVKGQFKVVDPRMKKDLRAFKNKEKTKGRK 260
Query: 806 KK 807
K+
Sbjct: 261 KR 262
>gi|298400875|gb|ADI81757.1| cell division protein [Heliconius melpomene melpomene]
Length = 273
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 128/229 (55%), Gaps = 17/229 (7%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
K + D YYRLAKE G+R+R+++KL+Q++ +++ +DLCAAPG W QV +++
Sbjct: 3 KDKRDIYYRLAKEEGWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQVLTKKLRK 62
Query: 67 GSL------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
+ ++ +DL +A + G ++ DITK + + E G++A DLV+ DG+
Sbjct: 63 NTSNTDDVKIVAVDLQAMAALPGVKQIQGDITKISTAHEI--IQEFEGLKA-DLVVCDGA 119
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
P+V G + Q+ L++ ++ + T L G FV K+FR +D + + LK F+ V
Sbjct: 120 PDVTGLHDIDEYVQSQLLLAALNITTHVLKEGGVFVAKIFRGKDVTLLYSQLKLFFDYVT 179
Query: 181 VDKPAASRSASAEIYLLGIKYKAPAKIDPR----LLDVKYL----FQGS 221
V KP +SR++S E +++ YKAP P LLD KY F GS
Sbjct: 180 VSKPRSSRNSSIEAFVICQNYKAPPGYVPTMVNPLLDHKYCNFNQFTGS 228
>gi|374636480|ref|ZP_09708048.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanotorris formicicus
Mc-S-70]
gi|373558869|gb|EHP85190.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanotorris formicicus
Mc-S-70]
Length = 247
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 110/193 (56%), Gaps = 5/193 (2%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D YY LAK+ YRSRA++KL QL+ KF F++ V+DL APGGW+Q A + V V
Sbjct: 17 DFYYNLAKKQKYRSRATFKLFQLNEKFRFMKEGDIVVDLGCAPGGWLQAAREIVGEKGFV 76
Query: 71 LGLDLVPIAPIR--GAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWA 128
+G+DL + P+ +++ D+TK E ++++++ +V+ D SPN+ G W
Sbjct: 77 VGVDLQSVKPLPYDNVKTIKGDMTKEETIQKIREILYPAKP---TVVISDASPNISGVWD 133
Query: 129 QEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASR 188
+ L ++K+AT+ L G F KVF+ + + +++ FEKV KP ASR
Sbjct: 134 VDHARSIELTTIALKIATKLLKEGGNFAVKVFQGDMFMDYVSLVEKYFEKVYPTKPRASR 193
Query: 189 SASAEIYLLGIKY 201
SAE+Y++G Y
Sbjct: 194 KESAEVYVVGKGY 206
>gi|374724488|gb|EHR76568.1| ribosomal RNA large subunit methyltransferase E [uncultured marine
group II euryarchaeote]
Length = 245
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 103/191 (53%), Gaps = 3/191 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
H+ D + R AK GYRSR+++KL Q+ +F+ +R +LD+ PGGW QV ++ V
Sbjct: 8 NHKRDSWRRQAKASGYRSRSAFKLKQIQERFNLIREGDVILDVGCHPGGWAQVGMELVGE 67
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
VLG+DL P P+ GA+ L DIT+P + R ++ E R + ++ D SPN+ G
Sbjct: 68 SGFVLGVDLEPCQPVEGALLLTGDITEPHTQER---MLTELKGRPLNAIVSDISPNITGK 124
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
W + LV A L G+F TK+F+ ++ +K F V P A
Sbjct: 125 WDMDQAVAMTLVAQVFDFALPLLCKGGSFTTKLFQGVGVEELIDGVKPFFSDVRRYAPHA 184
Query: 187 SRSASAEIYLL 197
SR+AS+E+YL+
Sbjct: 185 SRNASSEVYLV 195
>gi|326475211|gb|EGD99220.1| tRNA methyltransferase [Trichophyton tonsurans CBS 112818]
Length = 309
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 123/237 (51%), Gaps = 36/237 (15%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHA-----VLDLCAAPGG 55
MGK K + D YYRLAKE +R+R+++KL+ LD +F S V+DLCAAPG
Sbjct: 1 MGK-SSKDKRDAYYRLAKEQNWRARSAFKLIHLDEEFDLFAHSDPDSVRRVVDLCAAPGS 59
Query: 56 WMQVAVQRVPV-----------------GSL-----------VLGLDLVPIAPIRGAVSL 87
W QV + RV + G++ ++ +DL P+AP+ G +L
Sbjct: 60 WSQV-LSRVLIRGESFGRRQYELDRGGAGNVAEEVRPRRDVKIVSVDLQPMAPLEGITTL 118
Query: 88 EQDITKPECRARVKKVMEEHGVRA-FDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLAT 146
+ DIT P + + + G DLVL DG+P+V G + Q+ L+ ++ LA
Sbjct: 119 QADITHPSTVPLLLNALNDEGEEEKVDLVLSDGAPDVTGLHDLDIYVQSQLLYAALNLAM 178
Query: 147 QFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKA 203
L P GTFV K+FR +D + LK +F +V V KP +SR++S E +++ YK
Sbjct: 179 GILRPGGTFVAKIFRGRDVDVLYAQLKSVFGRVVVAKPRSSRASSLEAFVVCRDYKG 235
>gi|157423575|gb|AAI53565.1| FtsJ homolog 1 (E. coli) [Danio rerio]
Length = 323
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 122/225 (54%), Gaps = 13/225 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 1 MGR-SSKDKRDIYYRLAKEEGWRARSAFKLLQLDEEFKLFKGVSRAVDLCAAPGSWSQVL 59
Query: 61 VQRV-----PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV 115
+++ ++ +DL +AP+ G ++ DITK + ++++ + DLV
Sbjct: 60 SRKLRGKDKSEEVKIVAVDLQAMAPLPGVTQIQGDITK---ISTAEEIIRHFEGESADLV 116
Query: 116 LHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL 175
+ DG+P+V G + Q L++ ++ + T L P G FV K+FR +D + + LK
Sbjct: 117 VCDGAPDVTGLHDVDEYIQAQLLLAALNITTHVLKPGGNFVAKIFRGKDVTLLYSQLKIF 176
Query: 176 FEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPR----LLDVKY 216
F V KP +SR++S E +++ Y P P LLD Y
Sbjct: 177 FSFVTCAKPPSSRNSSIEAFVVCQNYSPPEGYVPNMSNPLLDHSY 221
>gi|83945237|ref|ZP_00957586.1| Ribosomal RNA large subunit methyltransferase J [Oceanicaulis sp.
HTCC2633]
gi|83851407|gb|EAP89263.1| Ribosomal RNA large subunit methyltransferase J [Oceanicaulis sp.
HTCC2633]
Length = 253
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 108/199 (54%), Gaps = 6/199 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y AK+ GYRSRA++KL++LD KF ++ V DL AAPGGW QVA++R V
Sbjct: 58 DPYVARAKQEGYRSRAAYKLIELDDKFGLIKPGMRVADLGAAPGGWTQVALKR--GAEHV 115
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
G+DL+ I PI GA+ ++ D T+ ++K + DLV+ D +P G + +
Sbjct: 116 AGVDLLEIEPIAGAILMQLDFTEEGAEDKLKAALGGPA----DLVISDLAPWTTGHKSTD 171
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ ALV + A L P G F+ KVF+ +L LK FEKV KP ASRS
Sbjct: 172 HLRIVALVETAAYFALDVLKPGGGFIAKVFQGGATGELLDLLKHRFEKVRHYKPPASRSE 231
Query: 191 SAEIYLLGIKYKAPAKIDP 209
SAE +LL ++ K P
Sbjct: 232 SAETFLLATGFRPETKGAP 250
>gi|395521570|ref|XP_003764891.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like
[Sarcophilus harrisii]
Length = 327
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 11/218 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE G+R+R+++KL+QLD +F +DLCAAPG W QV
Sbjct: 1 MGRTS-KDKRDVYYRLAKEEGWRARSAFKLLQLDEEFQLFSGVRRAVDLCAAPGSWSQVL 59
Query: 61 VQRV-----PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV 115
+++ P + ++ +DL +AP+ G V ++ DITK + ++++ + DLV
Sbjct: 60 SRKLGESGQP--ACIVAVDLQAMAPLPGVVQIQGDITK---ASTAREIIGHFEGQPADLV 114
Query: 116 LHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL 175
+ DG+P+V G + Q L++ ++ +A L P G FV K+FR +D + + L+
Sbjct: 115 VCDGAPDVTGLHDIDEYIQAQLLLAALNIAIHVLKPGGNFVAKIFRGRDVTLLYSQLRLF 174
Query: 176 FEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLD 213
F V KP +SR++S E + + + P +P +L+
Sbjct: 175 FPDVVCAKPRSSRNSSIEAFAVCRGFALPQGYEPSMLN 212
>gi|304314116|ref|YP_003849263.1| 23 S ribosomal RNA methyltransferase [Methanothermobacter
marburgensis str. Marburg]
gi|302587575|gb|ADL57950.1| predicted 23 S ribosomal RNA methyltransferase [Methanothermobacter
marburgensis str. Marburg]
Length = 211
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 125/209 (59%), Gaps = 7/209 (3%)
Query: 1 MGK-VKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQV 59
MGK + + + D YY+ AK YRSRAS+KL+QL++++ +R + VLDL AAPGGW QV
Sbjct: 1 MGKRWQAERKRDHYYKSAKRENYRSRASYKLLQLNNRYRLIRKGYRVLDLGAAPGGWSQV 60
Query: 60 AVQRVPVGSLVLGLDLVPI--APIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117
A+++V LV+ +DL I P+ ++ D T P + R ++EE G RA D+V+
Sbjct: 61 ALEKVGEEGLVVAVDLQRIKGFPVENFRAIMGDFTDPAIKER---IIEELGGRA-DVVIS 116
Query: 118 DGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFE 177
D +P++ G + + LV + + +A + L KG + K F+ + V+ +K+ F
Sbjct: 117 DAAPSLSGIRDIDHLRSVDLVENVLDIAYRVLERKGNILIKAFQGPELDKVIKEMKKDFW 176
Query: 178 KVEVDKPAASRSASAEIYLLGIKYKAPAK 206
K++ KPA+SR ASAE+Y++G +K K
Sbjct: 177 KLKTTKPASSRKASAEMYIVGRDFKGKRK 205
>gi|334328090|ref|XP_003341034.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like
[Monodelphis domestica]
Length = 323
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 122/216 (56%), Gaps = 7/216 (3%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE G+R+R+++KL+QLD +F +DLCAAPG W QV
Sbjct: 1 MGRTS-KDKRDVYYRLAKEEGWRARSAFKLLQLDEEFQLFSGVRRAVDLCAAPGSWSQVL 59
Query: 61 VQRV---PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117
+++ + ++ +DL +AP+ G V ++ DITK + ++++ + DLV+
Sbjct: 60 SRKLGEDESPACIVAVDLQAMAPLPGVVQIQGDITK---ASTAQEIIGHFEGQPADLVVC 116
Query: 118 DGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFE 177
DG+P+V G + Q L++ ++ +A L P G+FV K+FR +D + + L+ F
Sbjct: 117 DGAPDVTGLHDIDEYIQAQLLLAALNIAIHVLKPGGSFVAKIFRGRDVTLLYSQLRIFFP 176
Query: 178 KVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLD 213
V KP +SR++S E + + + P P +L+
Sbjct: 177 DVVCAKPRSSRNSSIEAFAVCRGFALPKGYVPSMLN 212
>gi|261349524|ref|ZP_05974941.1| ribosomal RNA large subunit methyltransferase J [Methanobrevibacter
smithii DSM 2374]
gi|288861888|gb|EFC94186.1| ribosomal RNA large subunit methyltransferase J [Methanobrevibacter
smithii DSM 2374]
Length = 207
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 115/199 (57%), Gaps = 7/199 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D YY+ AK+ YRSRAS+K+ QLD KF ++ V+DL AAPGGW QVA+++V LV
Sbjct: 12 DPYYKKAKKEDYRSRASYKIKQLDKKFKLIKEGDTVVDLGAAPGGWSQVALEKVGEEGLV 71
Query: 71 LGLDLVPIAPI--RGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWA 128
+G+DL I P + D T E + +KVM G +A +V+ D SP++ G
Sbjct: 72 IGVDLNRIKPFPEENFHGIRGDFTTTEVQ---EKVMNLIGGKA-KVVISDASPSLCGIKN 127
Query: 129 QEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASR 188
+ + L + +A L PKG V KVF+ +Y +L LK+ + +V+ KP +SR
Sbjct: 128 IDQLRSIDLTNTVIGIADNILEPKGNLVMKVFQGPEYKDMLTRLKKKYRQVKTTKPPSSR 187
Query: 189 SASAEIYLLGIKYKAPAKI 207
S+E+Y++G+ +K P KI
Sbjct: 188 KKSSEMYVVGLDFK-PKKI 205
>gi|224809482|ref|NP_001007385.2| FtsJ homolog 1 [Danio rerio]
Length = 323
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 122/225 (54%), Gaps = 13/225 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 1 MGR-SSKDKRDIYYRLAKEEGWRARSAFKLLQLDEEFKLFKGVSRAVDLCAAPGSWSQVL 59
Query: 61 VQRV-----PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV 115
+++ ++ +DL +AP+ G ++ DITK + ++++ + DLV
Sbjct: 60 SRKLRGKDKSEEVKIVAVDLQAMAPLPGVTQIQGDITK---ISTAEEIIRHFEGESADLV 116
Query: 116 LHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL 175
+ DG+P+V G + Q L++ ++ + T L P G FV K+FR +D + + LK
Sbjct: 117 VCDGAPDVTGLHDVDEYIQAQLLLAALNITTHVLKPGGNFVAKIFRGKDVTLLYSQLKIF 176
Query: 176 FEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPR----LLDVKY 216
F V KP +SR++S E +++ Y P P LLD Y
Sbjct: 177 FSFVTCAKPPSSRNSSIEAFVVCQNYSPPEGYVPNMSNPLLDHSY 221
>gi|156402431|ref|XP_001639594.1| predicted protein [Nematostella vectensis]
gi|156226723|gb|EDO47531.1| predicted protein [Nematostella vectensis]
Length = 529
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/313 (34%), Positives = 161/313 (51%), Gaps = 66/313 (21%)
Query: 497 LSEGD--EDEDTMHTSYDSDKDQGDLDA------NPLMVPLDDGIRPTQEEITNKWFSQE 548
L EG E++D S D + +Q +D NPL+V L++ + + T+KWF ++
Sbjct: 251 LEEGSDVENDDNEMESSDGEDNQESVDTQKENVENPLVVTLEE--KESASAKTSKWFEKD 308
Query: 549 IFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKAKQKMANDAAGPKSTHNQVSEVEGDF 608
IF G ED+ VD+ E + + K+K G K + ++ +
Sbjct: 309 IFQ-----------GLEDD--VDEDVEISQMLQDYKKK------GGKLIGSYAKKLTPEG 349
Query: 609 EIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQREQILDDAYNRYMFDDDG 668
+ A A S RK++R+ I+DD+YNRY F+D
Sbjct: 350 MAIGAQMASS----------------------------RKRKRD-IIDDSYNRYSFNDPS 380
Query: 669 LPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKV 728
LP WF+E+E R + P+TK E+ +A+ K+I+ARP KK+AEAK RKKR ++++E+
Sbjct: 381 LPSWFVEDEARCCKRQLPITKAEVEEYRARLKDINARPIKKIAEAKGRKKRKELKRVERA 440
Query: 729 RKKANVISDQADISDRSKRKQIEQLYKSA-VPKRPKKEYVVAKKGVQVR-----AG-KGK 781
RKKA + D D++ + K KQI+ LYK A V K+ + +YVV KK + AG KG
Sbjct: 441 RKKAEAVCDAPDVTAQEKMKQIQNLYKKASVNKKKEIKYVVTKKHQSAKRMKRPAGVKGP 500
Query: 782 V-LVDPRMKKDSR 793
+VDPRMKKD R
Sbjct: 501 FKVVDPRMKKDMR 513
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 61/85 (71%)
Query: 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCL 172
D VL+DG+PNVG AW Q+A +Q L + ++KLA + L G F+TKVFRS+DY +L+
Sbjct: 30 DCVLNDGAPNVGTAWVQDAFTQAELTLSALKLACENLKEGGWFITKVFRSKDYQPLLWVF 89
Query: 173 KQLFEKVEVDKPAASRSASAEIYLL 197
+QLF+ V KP ASR+ SAEI+++
Sbjct: 90 QQLFKSVHSTKPQASRNESAEIFVV 114
>gi|120553329|ref|YP_957680.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Marinobacter aquaeolei
VT8]
gi|143460489|sp|A1TXM4.1|RLME_MARAV RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|120323178|gb|ABM17493.1| 23S rRNA Um-2552 2'-O-methyltransferase [Marinobacter aquaeolei
VT8]
Length = 207
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 121/197 (61%), Gaps = 3/197 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D + + A++ GYRSRAS+KL+++++K ++ + V+DL +APGGW QVA + V
Sbjct: 13 EHVNDPFVKQAQQDGYRSRASYKLLEINNKDRLIKPTDLVVDLGSAPGGWSQVAAKLVGH 72
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ D++P+ PI G ++ D T+ E ++ +++ G RA D+V+ D +PN+ G
Sbjct: 73 KGRVVASDILPMDPIAGVEFIQGDFTEQEVFDQIMAILD--GARA-DVVISDMAPNISGV 129
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
A + + LV ++ +A Q L PKG+FV KVF + Y + +++ F+KV + KP +
Sbjct: 130 NAADQAASMYLVELALDMACQVLKPKGSFVAKVFHGEGYDEYVKTVRESFDKVVIRKPDS 189
Query: 187 SRSASAEIYLLGIKYKA 203
SR+ S E+YL+ ++
Sbjct: 190 SRARSREVYLVAKGFRV 206
>gi|150400217|ref|YP_001323984.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcus vannielii
SB]
gi|189040315|sp|A6USA0.1|RLME_METVS RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|150012920|gb|ABR55372.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcus vannielii
SB]
Length = 259
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 105/193 (54%), Gaps = 6/193 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D YY LAK YRSRA++KL QL+ KF+ ++ + V+DL APGGW+Q A +
Sbjct: 15 DPYYNLAKRKNYRSRATYKLFQLNEKFNIIKEKNVVVDLGCAPGGWLQAARDMTGEEGFI 74
Query: 71 LGLDLVPIAPI--RGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWA 128
+G+DL I P+ ++++ D+T E +++ ++ E D+++ D SPN+ G W
Sbjct: 75 VGIDLQQIKPLPYENVIAVKGDMTDEETLKKIQDILPEKP----DVIICDASPNISGVWD 130
Query: 129 QEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASR 188
+ L ++ AT+ L G FV KVF+ + + + + F+K KP ASR
Sbjct: 131 VDHTRSLELTTMALMTATKMLKKGGNFVVKVFQGDLFYKYVELVSEYFDKAFTTKPRASR 190
Query: 189 SASAEIYLLGIKY 201
SAE+Y++ Y
Sbjct: 191 EESAEVYVIAKHY 203
>gi|195450026|ref|XP_002072331.1| GK22383 [Drosophila willistoni]
gi|194168416|gb|EDW83317.1| GK22383 [Drosophila willistoni]
Length = 305
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 123/212 (58%), Gaps = 12/212 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D +YRLAK+ G+R+R+++KL+Q + F L +DLCAAPG W QV
Sbjct: 1 MGRT-SKDKRDIFYRLAKQQGWRARSAFKLLQAEETFHLLDGVTRAVDLCAAPGSWSQVL 59
Query: 61 VQ-----RVPV---GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAF 112
+ R P ++ +D+ +API G L DITK + K+++E G +
Sbjct: 60 SKHMYEPRTPEEREQVKIIAVDMQGMAPIDGVKQLRADITK---ESTAKEIIEYFGGQKA 116
Query: 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCL 172
LV+ DG+P+V G ++A Q L++ ++ +AT L G+FV KV+R+ D SSV
Sbjct: 117 QLVISDGAPDVTGQHDRDAYMQGQLLLAALSIATYILEEGGSFVGKVYRAGDISSVYAQF 176
Query: 173 KQLFEKVEVDKPAASRSASAEIYLLGIKYKAP 204
++ F+ V + KP+ASR++S E +++ ++ P
Sbjct: 177 QRFFKDVCLFKPSASRNSSIEAFVVARQFNLP 208
>gi|302510170|ref|XP_003017045.1| hypothetical protein ARB_05339 [Arthroderma benhamiae CBS 112371]
gi|291180615|gb|EFE36400.1| hypothetical protein ARB_05339 [Arthroderma benhamiae CBS 112371]
Length = 309
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 120/236 (50%), Gaps = 34/236 (14%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHA-----VLDLCAAPGG 55
MGK K + D YYRLAKE +R+R+++KL+ LD +F S V+DLCAAPG
Sbjct: 1 MGK-SSKDKRDAYYRLAKEQNWRARSAFKLIHLDEEFDLFAHSDPDSVRRVVDLCAAPGS 59
Query: 56 WMQVA----------------VQRVPVGSL-----------VLGLDLVPIAPIRGAVSLE 88
W QV + R G + ++ +DL P+AP+ G +L+
Sbjct: 60 WSQVLSRVLIRGESFGRRQYELDRGGTGDVAEEVRPRRDVKIVSVDLQPMAPLEGITTLQ 119
Query: 89 QDITKPECRARVKKVMEEHGVRA-FDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQ 147
DIT P + + + G DLVL DG+P+V G + Q+ L+ ++ LA
Sbjct: 120 ADITHPSTVPLLLNALNDEGEEEKVDLVLSDGAPDVTGLHDLDIYVQSQLLYAALNLAMG 179
Query: 148 FLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKA 203
L P GTFV K+FR +D + LK +F +V V KP +SR++S E +++ YK
Sbjct: 180 ILRPGGTFVAKIFRGRDVDVLYAQLKSVFGRVVVAKPRSSRASSLEAFVVCRDYKG 235
>gi|89095222|ref|ZP_01168145.1| cell division protein FtsJ [Neptuniibacter caesariensis]
gi|89080519|gb|EAR59768.1| cell division protein FtsJ [Oceanospirillum sp. MED92]
Length = 206
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 112/197 (56%), Gaps = 3/197 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y + +KE GYRSRAS+KL++LD K + V+DL AAPGGW Q+A +RV
Sbjct: 13 EHFDDHYVKKSKELGYRSRASFKLIELDEKDKLFQPGMTVVDLGAAPGGWSQIAAERVGD 72
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ D++P+ + G ++ D T+ E R+ K + G DLV+ D +PN+ G
Sbjct: 73 HGRVVASDILPMDSMAGVEFVQGDFTEEEVLNRILKAL---GDEPADLVISDMAPNMSGM 129
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
A + + LV ++ +A + L P G FV KVF+ + + L ++ F KV KP +
Sbjct: 130 SAVDQPAAMYLVELALDMAREVLKPGGNFVAKVFQGEGFDQYLKDMRTSFNKVVTRKPDS 189
Query: 187 SRSASAEIYLLGIKYKA 203
SR+ S E+YLLG +K
Sbjct: 190 SRARSREVYLLGKGFKG 206
>gi|254787193|ref|YP_003074622.1| ribosomal RNA large subunit methyltransferase J [Teredinibacter
turnerae T7901]
gi|237683719|gb|ACR10983.1| ribosomal RNA large subunit methyltransferase J [Teredinibacter
turnerae T7901]
Length = 206
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 113/209 (54%), Gaps = 9/209 (4%)
Query: 1 MGKVKGKHRL------DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPG 54
M + K HR D+Y + +++ GYRSRAS+KL++LD+K R V+DL AAPG
Sbjct: 1 MARSKSSHRWLREHFSDQYVKASQKDGYRSRASYKLIELDNKDKLFRPGMTVVDLGAAPG 60
Query: 55 GWMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114
GW QVAVQ++ V+ D++P+ I G ++ D T+ + M+ G RA DL
Sbjct: 61 GWSQVAVQQIGDKGQVIASDILPMDSIAGVTFIQGDFTEESVLEELLGAMD--GERA-DL 117
Query: 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQ 174
V+ D +PN+ G A + LV ++ +A Q L P GTFV KVF + +
Sbjct: 118 VISDMAPNMSGVTAVDQPKSMYLVELALDMAKQVLKPGGTFVCKVFHGEGFDDFFKDCNA 177
Query: 175 LFEKVEVDKPAASRSASAEIYLLGIKYKA 203
F K KP ASR+ S E+YL+ YKA
Sbjct: 178 SFSKAVTRKPDASRARSREVYLVAKGYKA 206
>gi|387812794|ref|YP_005428271.1| 23S rRNA methyltransferase [Marinobacter hydrocarbonoclasticus ATCC
49840]
gi|381337801|emb|CCG93848.1| 23 S rRNA methyltransferase [Marinobacter hydrocarbonoclasticus
ATCC 49840]
Length = 213
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 120/196 (61%), Gaps = 3/196 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D + + A++ GYRSRAS+KL+++++K ++ + V+DL +APGGW QVA + V
Sbjct: 19 EHVNDPFVKQAQQDGYRSRASYKLLEINNKDRLIKPTDLVVDLGSAPGGWSQVAAKLVGH 78
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ D++P+ PI G ++ D T+ E ++ +++ G RA D V+ D +PN+ G
Sbjct: 79 KGRVVASDILPMDPIAGVEFIQGDFTEQEVFDQIMAILD--GARA-DAVISDMAPNISGV 135
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
A + + LV ++ +A Q L PKG+FV KVF + Y + +++ F+KV + KP +
Sbjct: 136 NAADQAASMYLVELALDMACQVLKPKGSFVAKVFHGEGYDEYVKTVRESFDKVVIRKPDS 195
Query: 187 SRSASAEIYLLGIKYK 202
SR+ S E+YL+ ++
Sbjct: 196 SRARSREVYLVAKGFR 211
>gi|196016828|ref|XP_002118264.1| hypothetical protein TRIADDRAFT_62287 [Trichoplax adhaerens]
gi|190579165|gb|EDV19267.1| hypothetical protein TRIADDRAFT_62287 [Trichoplax adhaerens]
Length = 313
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 120/223 (53%), Gaps = 14/223 (6%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+Q+D +F+ + +DLCAAPG W QV
Sbjct: 1 MGK-SSKDKRDIYYRQAKEEGWRARSAFKLLQIDEEFTIFKGVTRAVDLCAAPGSWSQVL 59
Query: 61 VQRV----------PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVR 110
+++ ++ +DL +AP+ G + ++ DIT R+ E G +
Sbjct: 60 SKKLRNQENLSEAEQSKVKIVAVDLQAMAPLDGVIQIQGDITSVSTANRIIDYFE--GEK 117
Query: 111 AFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLY 170
A DLV+ DG+P+V G + Q L++ ++ + L GTF+ K+FR +D S +
Sbjct: 118 A-DLVVCDGAPDVTGQHDLDEYFQAQLLLAALNITNHVLKSGGTFIAKIFRGKDVSLLYS 176
Query: 171 CLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLD 213
L+ F V + KP +SR++S E +++ Y P P + +
Sbjct: 177 QLRVFFPNVTISKPRSSRNSSIEAFVVCRNYSQPEGFTPTMTN 219
>gi|257095284|ref|YP_003168925.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257047808|gb|ACV36996.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 206
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 108/192 (56%), Gaps = 3/192 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y + A+ GYRSRA++KL+ +D LRS ++DL A+PGGW QVA +R+
Sbjct: 13 EHVSDAYVQRARAEGYRSRAAYKLMAIDDTDHLLRSGDVIVDLGASPGGWSQVAARRLQG 72
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
G V+ +DL+ + P+R L+ D +P+ R++ ++ V LVL D SPN+ G
Sbjct: 73 GGRVIAVDLLEMEPLRDVTFLQGDFREPDVIGRLETILAGKKV---GLVLSDMSPNISGI 129
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ L ++ A ++L P+G F+ KVF+ + L +++ F+ V KP A
Sbjct: 130 AVCDQARGMHLAELGLEFACKWLKPEGAFLVKVFQGHGFDDFLAAMRKAFKSVASRKPDA 189
Query: 187 SRSASAEIYLLG 198
SR S EIYLLG
Sbjct: 190 SRDRSPEIYLLG 201
>gi|198428770|ref|XP_002127655.1| PREDICTED: similar to FtsJ homolog 1 [Ciona intestinalis]
Length = 322
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 133/242 (54%), Gaps = 18/242 (7%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSS-HAVLDLCAAPGGWMQV 59
MG+ K + D YYRLAKE G+R+R+++KL+ LD +F+ + V+DLCAAPG W QV
Sbjct: 1 MGRT-SKDKRDVYYRLAKEQGWRARSAFKLLHLDEEFNLFHNGVKKVVDLCAAPGSWSQV 59
Query: 60 AVQRVPVGSL-------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAF 112
+++ + ++ +DL +A + G + L+ DIT + + ++ +
Sbjct: 60 LSRKLRGTEVENNKDVKIVAVDLQAMADLPGVIQLQGDITN---VSTAQSIISHFEGESA 116
Query: 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCL 172
DLV+ DG+P+V G + Q L++ ++ + T L GTFV K+FR +D + + L
Sbjct: 117 DLVVCDGAPDVTGLHDIDEYIQAQLLLAALNITTHVLKLGGTFVAKIFRGKDVTLLYAQL 176
Query: 173 KQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPR----LLDVKY-LFQGSVE-PRK 226
+ F+KV KP +SR++S E +++ Y P P LLD+ Y L+ +E P +
Sbjct: 177 RLFFKKVTCAKPRSSRNSSIEAFVVCENYSPPPSYIPNMSNPLLDMNYDLYANQLEGPNR 236
Query: 227 VV 228
V+
Sbjct: 237 VI 238
>gi|194383894|dbj|BAG59305.1| unnamed protein product [Homo sapiens]
Length = 726
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 124/211 (58%), Gaps = 28/211 (13%)
Query: 593 GPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQRE 652
GPKS + FEIVP +D + D E ++A +KK R
Sbjct: 520 GPKSDDD-------GFEIVPI------EDPAKHRILDPEGLALGAVIASSKKAKR----- 561
Query: 653 QILDDAYNRYMFDDDG--LPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKV 710
++D+++NRY F++D LP+WF++EE++HR PV K+E+ + +++EI+ARP KKV
Sbjct: 562 DLIDNSFNRYTFNEDEGELPEWFVQEEKQHRIRQLPVGKKEVEHYRKRWREINARPIKKV 621
Query: 711 AEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKE--YVV 768
AEAKARKKR +++LE+ RKKA + + DIS+R K Q+ LYK A + K+ YVV
Sbjct: 622 AEAKARKKRRMLKRLEQTRKKAEAVVNTVDISEREKVAQLRSLYKKAGLGKEKRHVTYVV 681
Query: 769 AKKGV--QVRAGKGKV----LVDPRMKKDSR 793
AKKGV +VR G +VD RMKKD R
Sbjct: 682 AKKGVGRKVRRPAGVRGHFKVVDSRMKKDQR 712
>gi|302659743|ref|XP_003021559.1| hypothetical protein TRV_04406 [Trichophyton verrucosum HKI 0517]
gi|291185462|gb|EFE40941.1| hypothetical protein TRV_04406 [Trichophyton verrucosum HKI 0517]
Length = 309
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 120/236 (50%), Gaps = 34/236 (14%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHA-----VLDLCAAPGG 55
MGK K + D YYRLAKE +R+R+++KL+ LD +F S V+DLCAAPG
Sbjct: 1 MGK-SSKDKRDAYYRLAKEQNWRARSAFKLIHLDEEFDLFAHSDPDSVRRVVDLCAAPGS 59
Query: 56 WMQVA----------------VQRVPVGSL-----------VLGLDLVPIAPIRGAVSLE 88
W QV + R G + ++ +DL P+AP+ G +L+
Sbjct: 60 WSQVLSRVLIRGESFGRRQYELDRGGTGGVAEEVRPRRDVKIVSVDLQPMAPLEGITTLQ 119
Query: 89 QDITKPECRARVKKVMEEHGVRA-FDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQ 147
DIT P + + + G DLVL DG+P+V G + Q+ L+ ++ LA
Sbjct: 120 ADITHPSTVPLLLNALNDEGEEEKVDLVLSDGAPDVTGLHDLDIYVQSQLLYAALNLAMG 179
Query: 148 FLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKA 203
+ P GTFV K+FR +D + LK +F +V V KP +SR++S E +++ YK
Sbjct: 180 IIRPGGTFVAKIFRGRDVDVLYAQLKSVFGRVVVAKPRSSRASSLEAFVVCRDYKG 235
>gi|357604421|gb|EHJ64181.1| cell division-like protein [Danaus plexippus]
Length = 292
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 131/240 (54%), Gaps = 17/240 (7%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYRLAKE G+R+R+++KL+Q++ + + +DLCAAPG W QV
Sbjct: 1 MGKTS-KDKRDIYYRLAKEEGWRARSAFKLLQINEEHNIFNGVLRAVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGS------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114
+++ + ++ +DL +A + G ++ DITK + K E G++A DL
Sbjct: 60 TKKLRQNAENDDDVKIVAVDLQAMAALPGVKQIQGDITKISTANEIIK--EFEGLKA-DL 116
Query: 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQ 174
V+ DG+P+V G + Q+ L++ ++ + T L G FV K+FR +D + V LK
Sbjct: 117 VVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKNGGVFVAKIFRGKDVTLVYSQLKL 176
Query: 175 LFEKVEVDKPAASRSASAEIYLLGIKYK-----APAKIDPRLLDVKYL-FQGSVEPRKVV 228
FE V V KP +SR++S E +++ Y P I+P LLD KY F P + +
Sbjct: 177 FFEFVTVSKPRSSRNSSIEAFVICQNYSPPPGYVPTMINP-LLDHKYCDFNQLTGPNRFI 235
>gi|381166722|ref|ZP_09875936.1| Ribosomal RNA large subunit (23S) methyltransferase [Phaeospirillum
molischianum DSM 120]
gi|380684295|emb|CCG40748.1| Ribosomal RNA large subunit (23S) methyltransferase [Phaeospirillum
molischianum DSM 120]
Length = 253
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 109/197 (55%), Gaps = 8/197 (4%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV----PV 66
D Y AK GYRSRA++K++QLD +F LR V+DL AAPGGW QVAVQRV P
Sbjct: 52 DPYVYEAKRLGYRSRAAFKIIQLDDRFHLLRPGVRVVDLGAAPGGWTQVAVQRVKAGQPK 111
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
G V+G+D++ PI GA L+ D + R+K+ + D+VL D + G
Sbjct: 112 GGTVVGMDILEWDPIAGATVLQGDFLADDAPDRLKEALGGPA----DVVLSDMAAPTTGH 167
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ + + ALV ++ A + L P G FV KVF+ ++L LK+ F V KP A
Sbjct: 168 PSTDHLRIIALVEVALHFAMEVLTPGGAFVAKVFQGGTEKTLLDQLKKNFTTVRHAKPPA 227
Query: 187 SRSASAEIYLLGIKYKA 203
SRS SAE Y++ ++
Sbjct: 228 SRSDSAETYVVATGFRG 244
>gi|407784103|ref|ZP_11131288.1| 23S rRNA methylase [Oceanibaculum indicum P24]
gi|407198352|gb|EKE68389.1| 23S rRNA methylase [Oceanibaculum indicum P24]
Length = 231
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 109/193 (56%), Gaps = 5/193 (2%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y AK GYRSRA++K+ QLD KF F + + ++DL AAPGGW QVAV+R P ++V
Sbjct: 37 DPYVAEAKRLGYRSRAAFKIAQLDDKFGFFKGAKRIVDLGAAPGGWTQVAVERAPNATIV 96
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
LD++P+ + G L D + R+K + G +A DLVL D +P G +
Sbjct: 97 -ALDILPMDEMGGVTVLHMDFLAEDAPERLKTAL---GGKA-DLVLSDMAPPTTGHTKTD 151
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ L ++ A + LAP GTF+ KVF+ ++L +K F V+ KP ASRS
Sbjct: 152 HLRIMGLCEIALAFAEEVLAPGGTFLCKVFQGGTEGALLNRMKLCFATVKHAKPPASRSD 211
Query: 191 SAEIYLLGIKYKA 203
SAE+Y++ ++
Sbjct: 212 SAELYVIASGFRG 224
>gi|344924728|ref|ZP_08778189.1| cell division protein methyltransferase [Candidatus Odyssella
thessalonicensis L13]
Length = 226
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 111/197 (56%), Gaps = 8/197 (4%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGS-- 68
D Y + AK GYRSRA++KL+++D KF L+ V+DL A PGGW QVAV+RV +
Sbjct: 34 DPYVQQAKSDGYRSRAAYKLIEIDQKFKILKPGQRVIDLGACPGGWTQVAVERVKSQTNP 93
Query: 69 --LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+G+DL +A I GA + D T+ E + ++ ++++ ++L D + G
Sbjct: 94 KARVIGVDLTEMAAIAGATVFQGDFTEEETQTKLIELLDGKA----QVILSDMAAPACGM 149
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ + LV ++ A LAP G FV KV R +++L LK F+KV KP A
Sbjct: 150 TDVDHIRIMVLVEEAFNFAENILAPGGAFVAKVLRGGTEANLLKRLKLAFQKVTHFKPPA 209
Query: 187 SRSASAEIYLLGIKYKA 203
SR SAE+Y++GI +K
Sbjct: 210 SRKDSAEMYVIGIGFKG 226
>gi|317032331|ref|XP_001394644.2| transfer RNA methyltransferase [Aspergillus niger CBS 513.88]
Length = 396
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 122/236 (51%), Gaps = 33/236 (13%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHA-----VLDLCAAPGG 55
MGK K + D YYRLAKE +R+R+++KL+Q+D +F + V+DLCAAPG
Sbjct: 1 MGK-SSKDKRDAYYRLAKEQNWRARSAFKLIQIDEQFDLFEHENPDKVTRVVDLCAAPGS 59
Query: 56 WMQVAVQRVPVGSL------------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKV 103
W QV + RV + ++ +DL P+AP+ G +L+ DIT P + +
Sbjct: 60 WSQV-LSRVLIKDTDMAELKPRKNVKIVSIDLQPMAPLEGITTLKADITHPSTIPLLLRA 118
Query: 104 MEEHGV--------------RAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFL 149
++ DLV+ DG+P+V G + Q+ L+ ++ LA L
Sbjct: 119 LDPEAYDSSTSSTPSAIRPPHPVDLVISDGAPDVTGLHDLDIYIQSQLLYSALNLALGVL 178
Query: 150 APKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPA 205
P G FV K+FR +D + L+ +FEKV V KP +SR++S E +++ + P+
Sbjct: 179 RPGGKFVAKIFRGRDVDLLYAQLRTVFEKVSVAKPRSSRASSLEAFVVCEGFIPPS 234
>gi|348685725|gb|EGZ25540.1| putative ribosomal RNA methyltransferase [Phytophthora sojae]
Length = 256
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 114/211 (54%), Gaps = 13/211 (6%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA---------V 61
D YYR AKE G+R+R+++KL+QLD +F FLR +DLCAAPG W QV V
Sbjct: 10 DIYYRKAKEVGFRARSAFKLLQLDEQFDFLRHVQRAVDLCAAPGSWSQVLSRKLYDASNV 69
Query: 62 QRVPVGSL-VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
Q G + V+ +DL +API G L+ DIT R + + HG +A +++ DG+
Sbjct: 70 QSADSGDVRVVSVDLQEMAPIAGVQLLQGDITSK--RTAEQIIGHFHGAKA-QVLVSDGA 126
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
P+V G + Q L+ ++ + T L G+FV K+FR + Y + L FE V
Sbjct: 127 PDVTGVHDIDEFVQAELLAAALNITTHVLEEGGSFVAKIFRCEQYDLLATQLSVFFESVS 186
Query: 181 VDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
KP +SR+ S E +++ ++ P K P +
Sbjct: 187 CSKPMSSRAQSNEAFVVCQGFRLPEKYTPVM 217
>gi|7019917|dbj|BAA90924.1| unnamed protein product [Homo sapiens]
Length = 574
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 124/211 (58%), Gaps = 28/211 (13%)
Query: 593 GPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQRE 652
GPKS + FEIVP +D + D E ++A +KK R
Sbjct: 368 GPKSDDD-------GFEIVPI------EDPAKHRILDPEGLALGAVIASSKKAKR----- 409
Query: 653 QILDDAYNRYMFDDDG--LPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKV 710
++D+++NRY F++D LP+WF++EE++HR PV K+E+ + +++EI+ARP KKV
Sbjct: 410 DLIDNSFNRYTFNEDEGELPEWFVQEEKQHRIRQLPVGKKEVEHYRKRWREINARPIKKV 469
Query: 711 AEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKE--YVV 768
AEAKARKKR +++LE+ RKKA + + DIS+R K Q+ LYK A + K+ YVV
Sbjct: 470 AEAKARKKRRMLKRLEQTRKKAEAVVNTVDISEREKVAQLRSLYKKAGLGKEKRHVTYVV 529
Query: 769 AKKGV--QVRAGKGKV----LVDPRMKKDSR 793
AKKGV +VR G +VD RMKKD R
Sbjct: 530 AKKGVGRKVRRPAGVRGHFKVVDSRMKKDQR 560
>gi|15679761|ref|NP_276879.1| cell division protein J [Methanothermobacter thermautotrophicus
str. Delta H]
gi|9911011|sp|O27801.1|RLME_METTH RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|2622903|gb|AAB86239.1| cell division protein J [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 211
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 123/209 (58%), Gaps = 7/209 (3%)
Query: 1 MGK-VKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQV 59
MGK + + + D YYR AK+ YRSRAS+KL+QL++K+ ++ VLDL AAPGGW QV
Sbjct: 1 MGKRWQAERKRDHYYRSAKKENYRSRASYKLLQLNNKYKLIKKGDRVLDLGAAPGGWSQV 60
Query: 60 AVQRVPVGSLVLGLDLVPI--APIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117
A+ +V LV+ +DL I P ++ D T PE + K++ E G RA D+V+
Sbjct: 61 ALDKVGEEGLVVAVDLQRIKGFPAENFRAIRGDFTDPEVK---DKIIRELGGRA-DVVIS 116
Query: 118 DGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFE 177
D +P++ G + + LV + + +A + L KG + K F+ + V+ L++ F
Sbjct: 117 DAAPSLSGIRDIDHLRSVDLVENVLDIAYRVLDRKGNILIKAFQGPELDRVIKELRKDFW 176
Query: 178 KVEVDKPAASRSASAEIYLLGIKYKAPAK 206
K++ KPA+SR ASAE+Y++G +K K
Sbjct: 177 KLKTTKPASSRKASAEMYIVGRDFKGKEK 205
>gi|343961403|dbj|BAK62291.1| putative rRNA methyltransferase 3 [Pan troglodytes]
Length = 473
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 127/211 (60%), Gaps = 28/211 (13%)
Query: 593 GPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQRE 652
GPKS + FEIVP +D + D E ++A +KK R
Sbjct: 267 GPKSDDD-------GFEIVPI------EDPAKHRILDPEGLALGAVIASSKKAKR----- 308
Query: 653 QILDDAYNRYMFDDDG--LPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKV 710
++D+++NRY F++D LP+WF++EE++HR PV K+E+ + +++EI+ARP KKV
Sbjct: 309 DLIDNSFNRYTFNEDEGELPEWFVQEEKQHRIRQLPVGKKEVEHYRKRWREINARPIKKV 368
Query: 711 AEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKE--YVV 768
AEAKARKKR +++LE+ RKKA + + DIS+R K Q+ LYK A + K+ YVV
Sbjct: 369 AEAKARKKRRMLKRLEQTRKKAEAVVNTVDISEREKVAQLRSLYKKAGLGKEKRHVTYVV 428
Query: 769 AKKGV--QVR--AG-KGKV-LVDPRMKKDSR 793
AKKGV +VR AG +G +VD RMKKD R
Sbjct: 429 AKKGVGRKVRRPAGVRGHFKVVDSRMKKDQR 459
>gi|21740261|emb|CAD39141.1| hypothetical protein [Homo sapiens]
Length = 691
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 124/211 (58%), Gaps = 28/211 (13%)
Query: 593 GPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQRE 652
GPKS + FEIVP +D + D E ++A +KK R
Sbjct: 485 GPKSDDD-------GFEIVPI------EDPAKHRILDPEGLALGAVIASSKKAKR----- 526
Query: 653 QILDDAYNRYMFDDDG--LPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKV 710
++D+++NRY F++D LP+WF++EE++HR PV K+E+ + +++EI+ARP KKV
Sbjct: 527 DLIDNSFNRYTFNEDEGELPEWFVQEEKQHRIRQLPVGKKEVEHYRKRWREINARPIKKV 586
Query: 711 AEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKE--YVV 768
AEAKARKKR +++LE+ RKKA + + DIS+R K Q+ LYK A + K+ YVV
Sbjct: 587 AEAKARKKRRMLKRLEQTRKKAEAVVNTVDISEREKVAQLRSLYKKAGLGKEKRHVTYVV 646
Query: 769 AKKGV--QVRAGKGKV----LVDPRMKKDSR 793
AKKGV +VR G +VD RMKKD R
Sbjct: 647 AKKGVGRKVRRPAGVRGHFKVVDSRMKKDQR 677
>gi|291406359|ref|XP_002719522.1| PREDICTED: FtsJ homolog 3 [Oryctolagus cuniculus]
Length = 836
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 130/225 (57%), Gaps = 28/225 (12%)
Query: 593 GPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQRE 652
GPKS + FE+VP +D + D E ++A +KK R
Sbjct: 630 GPKSD-------DAGFEVVPI------EDPAKRRILDPEGLALGAVIASSKKAKR----- 671
Query: 653 QILDDAYNRYMFDDDG--LPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKV 710
++D+++NRY F++D LP+WF++EE++HR P+ K+++ + ++KEI+ARP KKV
Sbjct: 672 DLIDNSFNRYTFNEDEEELPEWFVQEEKQHRIRQLPIDKKDVEHYRKRWKEINARPIKKV 731
Query: 711 AEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKE--YVV 768
AEAKARKKR ++KLE+ +KKA + + DIS+R K Q+ LYK A + K++ YVV
Sbjct: 732 AEAKARKKRRMLKKLEQTKKKAEAVVNTVDISEREKVAQLRSLYKKAGLGKEKRQVTYVV 791
Query: 769 AKKGV--QVRAGKGKV----LVDPRMKKDSRTHGSGKARKGGSKK 807
AKKGV +VR G +VD RMKKD R + RK +K
Sbjct: 792 AKKGVGRKVRRPAGVRGHFKVVDSRMKKDQRAQQRKEQRKKHKRK 836
>gi|56551298|ref|YP_162137.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Zymomonas mobilis subsp.
mobilis ZM4]
gi|260753080|ref|YP_003225973.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
gi|384411860|ref|YP_005621225.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|397676729|ref|YP_006518267.1| ribosomal RNA large subunit methyltransferase E [Zymomonas mobilis
subsp. mobilis ATCC 29191]
gi|81355445|sp|Q5NQH8.1|RLME_ZYMMO RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|56542872|gb|AAV89026.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Zymomonas mobilis subsp.
mobilis ZM4]
gi|258552443|gb|ACV75389.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
gi|335932234|gb|AEH62774.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|395397418|gb|AFN56745.1| Ribosomal RNA large subunit methyltransferase E [Zymomonas mobilis
subsp. mobilis ATCC 29191]
Length = 221
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 114/195 (58%), Gaps = 5/195 (2%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y + A+ GYRSRA++KL++LD +FS L+++ ++DL APGGW QVA ++ P +V
Sbjct: 29 DPYVQKAQAEGYRSRAAFKLIELDERFSLLKNARRIIDLGIAPGGWSQVARKKAPQAKIV 88
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
G+DL+ API G + D T PE + KK++E G A DLVL D + N G +
Sbjct: 89 -GIDLLEAAPIEGVTIFQNDFTDPEAQ---KKLIEALG-GAADLVLSDMAANTIGHAQTD 143
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ ALV ++ A++ L G+FV KV ++ LK+LF +V+ KP ASR
Sbjct: 144 HLRTMALVEEAAVFASETLREGGSFVAKVLAGGADKDLVALLKRLFGQVKHAKPPASRRE 203
Query: 191 SAEIYLLGIKYKAPA 205
S+E Y++ ++ A
Sbjct: 204 SSEWYVIAQNFRGEA 218
>gi|73965375|ref|XP_548033.2| PREDICTED: putative rRNA methyltransferase 3 [Canis lupus
familiaris]
Length = 834
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 128/213 (60%), Gaps = 22/213 (10%)
Query: 593 GPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQRE 652
G K +H S+ +G FEIVP +D + D E I+A +KK R
Sbjct: 622 GKKRSHGLKSDDDG-FEIVPI------EDPVKHQILDPEGLALGAIIASSKKAKR----- 669
Query: 653 QILDDAYNRYMFDDDG--LPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKV 710
++DD+++RY F+++ LP+WF++EE++HR P+ K++I + +++EI+ARP KKV
Sbjct: 670 DLIDDSFSRYTFNEEEGELPEWFVQEEKQHRIRQLPIDKKDIEHYRRRWREINARPIKKV 729
Query: 711 AEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKE--YVV 768
AEAKARKKR ++KLE+ +KKA + + DIS+R K Q+ LYK A + K++ YVV
Sbjct: 730 AEAKARKKRRMLKKLEQTKKKAEAVVNTVDISEREKVAQLRSLYKKAGLGKEKRQVTYVV 789
Query: 769 AKKGV--QVRAGKGKV----LVDPRMKKDSRTH 795
AKKGV +VR G +VD RMKKD R
Sbjct: 790 AKKGVGRKVRRPAGVRGHFKVVDSRMKKDQRAQ 822
>gi|365858113|ref|ZP_09398069.1| ribosomal RNA large subunit methyltransferase J [Acetobacteraceae
bacterium AT-5844]
gi|363714683|gb|EHL98171.1| ribosomal RNA large subunit methyltransferase J [Acetobacteraceae
bacterium AT-5844]
Length = 228
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 107/193 (55%), Gaps = 4/193 (2%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y R AK G+RSRA++K+++LD K+ R + V+DL AAPGGW QVAVQRV V
Sbjct: 35 DPYVRAAKAAGWRSRAAFKILELDEKYKLFRPNQRVVDLGAAPGGWTQVAVQRVGDSGKV 94
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+GLDL+P+ I GA L+ D V + ++ DLVL D +PN G A +
Sbjct: 95 VGLDLLPMDEIPGATLLQGDFQDDAVEQAVLEALDGPA----DLVLSDMAPNTTGHNATD 150
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ L+ ++ A + L P G FV K F+ +L +K+ F V+ KP ASR
Sbjct: 151 HLRILGLIELALDFAGKVLTPGGAFVAKAFQGGTERELLNRMKRDFASVKHAKPPASRKG 210
Query: 191 SAEIYLLGIKYKA 203
SAE+Y++ ++
Sbjct: 211 SAEMYVVAQGFRG 223
>gi|194227880|ref|XP_001493665.2| PREDICTED: putative ribosomal RNA methyltransferase 1-like [Equus
caballus]
Length = 301
Score = 125 bits (314), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 116/195 (59%), Gaps = 6/195 (3%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE+G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 1 MGRTS-KDKRDVYYRLAKENGWRARSAFKLLQLDEEFQLFQGVTRAVDLCAAPGSWSQVL 59
Query: 61 VQRV-PVGS-LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
Q++ GS V+ +DL +AP+ G + ++ DIT+ + + E G A DLV+ D
Sbjct: 60 SQKIGGQGSGHVVAVDLQAMAPLPGVLQIQGDITQLSTAQEIIRHFE--GCPA-DLVVCD 116
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+P+V G + Q L++ ++ +AT L P G FV K+FR +D + + L+ F
Sbjct: 117 GAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLIYSQLRVFFSS 176
Query: 179 VEVDKPAASRSASAE 193
V KP +SR++S +
Sbjct: 177 VLCAKPRSSRNSSID 191
>gi|302758754|ref|XP_002962800.1| hypothetical protein SELMODRAFT_404105 [Selaginella moellendorffii]
gi|300169661|gb|EFJ36263.1| hypothetical protein SELMODRAFT_404105 [Selaginella moellendorffii]
Length = 674
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 110/163 (67%), Gaps = 24/163 (14%)
Query: 635 KAEILACAKKMLRKKQREQILDDAYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAA 694
KAEIL AKK+L KK R++I+DDAYN+YMFDD+GLP+WF ++E+RH RPV
Sbjct: 483 KAEILTYAKKILLKKDRDRIIDDAYNKYMFDDEGLPEWFADDEKRHSPRKRPV------- 535
Query: 695 MKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLY 754
KKVAEAKA KKR M+K+E+ R KA I+DQ +IS++SK + ++++Y
Sbjct: 536 -------------KKVAEAKAHKKRRVMKKMEQARSKAAAIADQPNISNKSKNRMMDKVY 582
Query: 755 KSA---VPKRPKKEYVVAKKGVQVRAGKGKVLVDPRMKKDSRT 794
K A KRPK+E +V K V+ GKGK++VD RMKKDSR+
Sbjct: 583 KKAAATTTKRPKRE-LVVAKKGGVKGGKGKLVVDRRMKKDSRS 624
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/118 (53%), Positives = 77/118 (65%), Gaps = 19/118 (16%)
Query: 256 ATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCDDLRVLGKQDFKHLLK 315
A DF+WS PLE+LGS+TSI+F DP IKDH TT+E+KALC+DLRVLGK++FK LLK
Sbjct: 202 AADFVWSEKPLELLGSITSISFEDPP---IKDHAETTDEIKALCEDLRVLGKKEFKQLLK 258
Query: 316 WRMQIKKAFSSAEKATVPASASAPTEG---------ENEEDADNRVLNEMEELKYAMD 364
W + ++KA S SAS TEG E EED D LN+M+ELK MD
Sbjct: 259 WCLHVRKALSK-------TSASEETEGDKAAEKDDDEKEEDEDEDTLNKMKELKSLMD 309
>gi|300709773|ref|YP_003735587.1| ribosomal RNA large subunit methyltransferase J [Halalkalicoccus
jeotgali B3]
gi|448297457|ref|ZP_21487503.1| 23S rRNA methyltransferase J [Halalkalicoccus jeotgali B3]
gi|299123456|gb|ADJ13795.1| ribosomal RNA large subunit methyltransferase J [Halalkalicoccus
jeotgali B3]
gi|445579766|gb|ELY34159.1| 23S rRNA methyltransferase J [Halalkalicoccus jeotgali B3]
Length = 251
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 111/202 (54%), Gaps = 7/202 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D+YY AK+ GYRSRA++KL QLD L V+DL AAPGGW+QVA +RV G+ V
Sbjct: 5 DEYYNKAKQQGYRSRAAYKLQQLDEMEDLLSHGDRVVDLGAAPGGWLQVASERVGTGT-V 63
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL I + G +++ D+T R + + + E D VL D +PN+ G ++ +
Sbjct: 64 IGVDLQRIDSLEGVETIKGDMTDEGTRGEIIERIGEA-----DTVLSDMAPNMTGEYSLD 118
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
L + + A + L P G V KVF +D ++ ++ FE V PAASR
Sbjct: 119 QARSVHLARQAFETAREILTPGGDLVVKVFEGRDLDALRDDMEAEFEYVRTTSPAASREE 178
Query: 191 SAEIYLLGIKY-KAPAKIDPRL 211
S+E+YL+ + AP + RL
Sbjct: 179 SSEVYLIAKGFLTAPVEAGQRL 200
>gi|301111504|ref|XP_002904831.1| ribosomal RNA methyltransferase, putative [Phytophthora infestans
T30-4]
gi|262095161|gb|EEY53213.1| ribosomal RNA methyltransferase, putative [Phytophthora infestans
T30-4]
Length = 256
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 115/211 (54%), Gaps = 13/211 (6%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV----PV 66
D YYR AKE G+R+R+++KL+QLD +F FLR+ +DLCAAPG W QV +++ V
Sbjct: 10 DIYYRKAKEVGFRARSAFKLLQLDEQFDFLRNVQRAVDLCAAPGSWSQVLSRKLYDASNV 69
Query: 67 GSL------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
S+ ++ +DL +API G L+ DIT R + + HG +A +V+ DG+
Sbjct: 70 QSVDSDDVRIMSVDLQEMAPIAGVQLLQGDITSK--RTAEQIISHFHGAKA-QVVVSDGA 126
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
P+V G + Q L+ ++ + T L G FV K+FR + Y + L FE V
Sbjct: 127 PDVTGVHDIDEFVQAELLAAALNITTHVLEEGGAFVAKIFRCEQYDLLATQLSVFFESVS 186
Query: 181 VDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
KP +SR+ S E +++ ++ P P +
Sbjct: 187 CSKPMSSRAQSNEAFVVCQGFRLPENYTPVM 217
>gi|144900076|emb|CAM76940.1| Ribosomal RNA methyltransferase RrmJ/FtsJ [Magnetospirillum
gryphiswaldense MSR-1]
Length = 238
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 109/193 (56%), Gaps = 4/193 (2%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y + A++ GYRSRA++KL++LD +F L+ V+DL AAPGGW QVAVQRV V
Sbjct: 45 DPYVQEARKLGYRSRAAFKLIELDDRFHLLKPGLRVVDLGAAPGGWTQVAVQRVGARGKV 104
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+D++ P+ GA+ + D + R+K+ ++ DLV+ D + G +
Sbjct: 105 VGMDILEYDPVPGAICMLGDFLADDSPDRLKEALDGLA----DLVVSDMAAPTTGHPPTD 160
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ LV ++ A + LAP GTF+ KVF+ S+L LK+ F V KP ASR
Sbjct: 161 HLRIIGLVEVALHFALEVLAPGGTFIAKVFQGGTEKSLLDLLKKNFTTVRHAKPPASRKE 220
Query: 191 SAEIYLLGIKYKA 203
SAE Y++ +K
Sbjct: 221 SAETYVIATGFKG 233
>gi|399067044|ref|ZP_10748724.1| 23S rRNA methylase [Novosphingobium sp. AP12]
gi|398027459|gb|EJL21010.1| 23S rRNA methylase [Novosphingobium sp. AP12]
Length = 225
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 104/195 (53%), Gaps = 5/195 (2%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y + AK GYRSRA++KL++LD KF L+ +DL APGGW QV + P V
Sbjct: 32 DPYVKKAKADGYRSRAAYKLIELDEKFGLLKGVTRAVDLGIAPGGWSQVLRLKAPKAK-V 90
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL+P PI G E D E A +++ +E A DLVL D + N G +
Sbjct: 91 VGIDLLPTDPIEGVTIFEMDFMADEAPAALEEALEG----APDLVLSDMAANTVGHKQTD 146
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ LV + A QF+AP GTFV KV + +L LK+ F V+ KP ASR
Sbjct: 147 HLRTMGLVETAADFAIQFMAPGGTFVAKVLAGGTDTELLTLLKRHFTSVKHAKPPASRKD 206
Query: 191 SAEIYLLGIKYKAPA 205
S+E Y++ +K A
Sbjct: 207 SSEWYVIAKGFKGRA 221
>gi|395826081|ref|XP_003786248.1| PREDICTED: putative rRNA methyltransferase 3 [Otolemur garnettii]
Length = 838
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 123/198 (62%), Gaps = 21/198 (10%)
Query: 608 FEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQREQILDDAYNRYMFDDD 667
FEIVP +D + D E ++A +KK R ++D+++NRY F+++
Sbjct: 640 FEIVPI------EDPVKHQILDAEGLALGAVIASSKKAKR-----DLIDNSFNRYSFNEE 688
Query: 668 G--LPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKL 725
LP+WF++EE++HR P+ K+E+ + +++EI+ARP KKVAEAKARKKR ++KL
Sbjct: 689 EGELPEWFVQEEKQHRIRQLPIDKKEVEHYRKRWREINARPIKKVAEAKARKKRRMLKKL 748
Query: 726 EKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKE--YVVAKKGV--QVR--AG- 778
E+ RKKA + + DIS+R K Q+ LYK A + K++ YVVAKKGV +VR AG
Sbjct: 749 EQTRKKAEAVVNTVDISEREKVAQLRSLYKKAGLGKEKRQVTYVVAKKGVGRKVRRPAGV 808
Query: 779 KGKV-LVDPRMKKDSRTH 795
+G +VD RMKKD R
Sbjct: 809 RGHFKVVDSRMKKDQRAQ 826
>gi|195355564|ref|XP_002044261.1| GM15097 [Drosophila sechellia]
gi|194129562|gb|EDW51605.1| GM15097 [Drosophila sechellia]
Length = 321
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 128/225 (56%), Gaps = 14/225 (6%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D +YRLAKE G+R+R+++KL+Q D F L +DLCAAPG W QV
Sbjct: 1 MGRT-SKDKRDIFYRLAKEQGWRARSAFKLLQADETFQLLEGLTRAVDLCAAPGSWSQVL 59
Query: 61 VQRV--PVGS------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAF 112
+R+ P+ ++ +DL +API G L DI+K + + ++E G
Sbjct: 60 AKRMYEPLTPEDREKVKIIAVDLQGMAPIEGVKQLRADISK---ESTAEAIIEFFGGEKA 116
Query: 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYC- 171
+V+ DG+P+ G ++ Q L++ ++ ++T L G+FV+K++R+ D +S LY
Sbjct: 117 QIVVSDGAPDSTGMHDFDSYVQGELLLSALSISTFILEEGGSFVSKIYRA-DRTSRLYTQ 175
Query: 172 LKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKY 216
LK+ F+ V V KP+ASR++S E +++ K+ P P L ++
Sbjct: 176 LKRFFKDVCVFKPSASRNSSIEAFVVARKFCLPDGFKPCNLTTEW 220
>gi|148557611|ref|YP_001265193.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Sphingomonas wittichii
RW1]
gi|189040343|sp|A5VFI9.1|RLME_SPHWW RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|148502801|gb|ABQ71055.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Sphingomonas wittichii
RW1]
Length = 229
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 109/193 (56%), Gaps = 5/193 (2%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y R A+ GYRSRA++KL++LD +F FLR + V+DL APGGW QV V+RV + +
Sbjct: 32 DPYVRKAQAEGYRSRAAYKLIELDERFHFLRGAKRVIDLGIAPGGWTQV-VRRVCPQAAI 90
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL+P PI GA+ L+ D E A++ + + D+VL D + N G +
Sbjct: 91 VGIDLLPTDPIDGAIILQMDFMSDEAPAQLAEALGGPA----DIVLSDMAANTVGHQQTD 146
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ ALV A++ L P GT+V KV ++ LK+LF V+ KP ASR
Sbjct: 147 HLRTMALVEAGCLFASEVLRPGGTYVAKVLAGGADHGLVAELKRLFTTVKHAKPPASRKD 206
Query: 191 SAEIYLLGIKYKA 203
S+E Y++ +K
Sbjct: 207 SSEWYVIAQGFKG 219
>gi|385333356|ref|YP_005887307.1| ribosomal RNA large subunit methyltransferase J [Marinobacter
adhaerens HP15]
gi|311696506|gb|ADP99379.1| ribosomal RNA large subunit methyltransferase J [Marinobacter
adhaerens HP15]
Length = 206
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 115/197 (58%), Gaps = 3/197 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D + + A+ GYRSRAS+KL++++ K + + V+DL +APGGW QVA + V
Sbjct: 13 EHVNDPFVKQAQVDGYRSRASYKLLEINKKDRLIHPNMVVVDLGSAPGGWSQVAAKLVGH 72
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ D++P+ I G ++ D T+ + + +M G D+V+ D +PN+ G
Sbjct: 73 KGRVIASDILPMDAIAGVDFIQGDFTENDV---FESIMATLGDDPVDVVISDMAPNISGV 129
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ S LV ++ +A+Q L PKG+F+ KVF+ + Y L ++ +F+KV V KP +
Sbjct: 130 TVADQASSMYLVELALDMASQVLKPKGSFLAKVFQGEGYDEYLKSVRAVFDKVVVRKPDS 189
Query: 187 SRSASAEIYLLGIKYKA 203
SRS S E+Y+LG +K
Sbjct: 190 SRSRSREVYILGKGFKG 206
>gi|409396347|ref|ZP_11247350.1| 23S rRNA methyltransferase J [Pseudomonas sp. Chol1]
gi|409119124|gb|EKM95511.1| 23S rRNA methyltransferase J [Pseudomonas sp. Chol1]
Length = 210
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 114/198 (57%), Gaps = 3/198 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y ++A+ GYRSRAS+KL+++ K LR V+DL AAPGGW QV + +
Sbjct: 13 EHFDDPYVKMAQRDGYRSRASYKLLEIQEKDRILRPGMTVVDLGAAPGGWSQVTSRVIGD 72
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
++ D++P+ I ++ D T+ E A++ + + EH V DLV+ D +PN+ G
Sbjct: 73 KGRLIASDILPMDSIADVTFIQGDFTEDEVFAQILEAIGEHPV---DLVISDMAPNMSGV 129
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
A + L ++ LAT+ L P G F+ K+F+ + + + L ++Q F+KV++ KP +
Sbjct: 130 RASDQPRAMFLCELALDLATRVLRPGGDFLIKIFQGEGFDAYLKDVRQNFDKVQMRKPLS 189
Query: 187 SRSASAEIYLLGIKYKAP 204
SR S E YLL +K P
Sbjct: 190 SRDRSREQYLLARGFKGP 207
>gi|260793442|ref|XP_002591721.1| hypothetical protein BRAFLDRAFT_80816 [Branchiostoma floridae]
gi|229276930|gb|EEN47732.1| hypothetical protein BRAFLDRAFT_80816 [Branchiostoma floridae]
Length = 303
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 122/220 (55%), Gaps = 11/220 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYR AKE G+R+R+++KL+Q+D +F+ L V+DLCAAPG W QV
Sbjct: 1 MGR-SSKDKRDIYYRKAKEEGWRARSAFKLMQIDEEFNVLSGVQKVVDLCAAPGSWSQVL 59
Query: 61 VQRV-------PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFD 113
+R+ ++ +DL +API G + ++ DITK + ++++ D
Sbjct: 60 SKRLRGEGKQKSDDVKIVAVDLQAMAPIPGVIQIQGDITK---VSTAQEIIGHFSGEQAD 116
Query: 114 LVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLK 173
LV+ DG+P+V G + Q L++ ++ + T L G FV K+FR +D + + LK
Sbjct: 117 LVVCDGAPDVTGLHDIDEYIQAQLLLAALNITTHVLKKGGGFVAKIFRGKDITLLYSQLK 176
Query: 174 QLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLD 213
F V V KP +SR++S E +++ Y P P +++
Sbjct: 177 IFFPDVTVAKPRSSRNSSIESFVVCRGYSPPEGYTPNMMN 216
>gi|319942668|ref|ZP_08016975.1| ribosomal RNA large subunit methyltransferase E [Sutterella
wadsworthensis 3_1_45B]
gi|319803751|gb|EFW00686.1| ribosomal RNA large subunit methyltransferase E [Sutterella
wadsworthensis 3_1_45B]
Length = 217
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 116/203 (57%), Gaps = 8/203 (3%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV-- 64
+H D + + ++ GYR+R+ +KL++LD K L+ V+DL +APG W QV +R+
Sbjct: 17 RHINDPFVKRSRAEGYRARSVYKLIELDEKEHLLKPGSTVVDLGSAPGSWTQVVRERLAG 76
Query: 65 PVGSL---VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
P GS+ ++ +D++P+ PI L+ D + E ++ +++ V D+VL D +P
Sbjct: 77 PDGSVRGRIIAMDILPMDPIDDVYFLQGDFREQEVADKLAEILNGDKV---DVVLSDMAP 133
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
N+ G A +A L +++ + LAP G FVTK F+ YS + LK++F+KV
Sbjct: 134 NLSGIAAADAARSLLLNELALEFCLEHLAPNGVFVTKAFQGSGYSQYVESLKRVFKKVAA 193
Query: 182 DKPAASRSASAEIYLLGIKYKAP 204
KP ASR SAE+YL+ KAP
Sbjct: 194 KKPEASRDTSAEVYLVSRGLKAP 216
>gi|390463195|ref|XP_003732988.1| PREDICTED: LOW QUALITY PROTEIN: putative rRNA methyltransferase 3
[Callithrix jacchus]
Length = 839
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 121/211 (57%), Gaps = 24/211 (11%)
Query: 595 KSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQREQI 654
K +H + S +G FEIVP +D D E ++A +KK R ++
Sbjct: 627 KRSHGRKSN-DGGFEIVPI------EDPVKHRILDPEGLALGAVIASSKKAKR-----EL 674
Query: 655 LDDAYNRYMFDDDG--LPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAE 712
+D+++NRY F++D LP+WF++EE++HR PV K+E+ + +++EI+ARP KKVAE
Sbjct: 675 IDNSFNRYTFNEDEGELPEWFVQEEKQHRIRQLPVGKKEVEHYRKRWREINARPIKKVAE 734
Query: 713 AKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKE--YVVAK 770
AKARKKR ++KLE+ RKKA + + DIS+R K Q+ LYK A + K YVVAK
Sbjct: 735 AKARKKRRMLKKLEQTRKKAEAVVNTVDISEREKVAQLRSLYKKAGLGKEKCHVTYVVAK 794
Query: 771 KGV--------QVRAGKGKVLVDPRMKKDSR 793
KGV VR V RMKKD R
Sbjct: 795 KGVGRKVRRPAGVRGHFKXVDWSSRMKKDQR 825
>gi|148642568|ref|YP_001273081.1| cell division protein J (23S rRNA methylase), FtsJ
[Methanobrevibacter smithii ATCC 35061]
gi|158513776|sp|A5UKI5.1|RLME_METS3 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|148551585|gb|ABQ86713.1| cell division protein J (23S rRNA methylase), FtsJ
[Methanobrevibacter smithii ATCC 35061]
Length = 210
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 111/193 (57%), Gaps = 6/193 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D YY+ AK+ YRSRAS+K+ QLD KF ++ V+DL AAPGGW QVA+++V LV
Sbjct: 12 DPYYKKAKKEDYRSRASYKIKQLDKKFKLIKEGDTVVDLGAAPGGWSQVALEKVGEEGLV 71
Query: 71 LGLDLVPIAPI--RGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWA 128
+G+DL I P + D T E + +KVM G +A +V+ D SP++ G
Sbjct: 72 IGVDLNRIKPFPEENFHGIRGDFTTTEVQ---EKVMNLIGGKA-KVVISDASPSLCGIKN 127
Query: 129 QEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASR 188
+ + L + +A L PKG V KVF+ +Y +L LK+ + +V+ KP +SR
Sbjct: 128 IDQLRSIDLTNTVIGIADNILEPKGNLVMKVFQGPEYKDMLTRLKKKYRQVKTTKPPSSR 187
Query: 189 SASAEIYLLGIKY 201
S+E+Y++G+ +
Sbjct: 188 KKSSEMYVVGLDF 200
>gi|440492017|gb|ELQ74619.1| SAM-dependent methyltransferase/cell division protein FtsJ
[Trachipleistophora hominis]
Length = 249
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 116/199 (58%), Gaps = 13/199 (6%)
Query: 16 LAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDL 75
+AKE+GYR+R+++K+ Q+D + L + V+DLCAAPGGW Q+ ++ + V+ +D+
Sbjct: 1 MAKENGYRARSAYKIQQIDEHYKILHGNTTVIDLCAAPGGWTQIIAEKC---TKVIAVDI 57
Query: 76 VPIAPIRGAVSLEQDITKPECRARVKKVMEE-HGVRA-----FDLVLHDGSPNVGGAWAQ 129
I PI G V + DIT C VK V+E H + DLVL DG+ N G
Sbjct: 58 QTILPIEGVVFIRDDITSDSC---VKSVLEHVHLLNNSENAKADLVLCDGASNTSGMLDV 114
Query: 130 EAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRS 189
+ Q++++ ++KLA + TFV K++R+ D +VL +++E+VE+ KP SRS
Sbjct: 115 DVHVQHSILQAALKLAEKISKVCSTFVGKLYRNGDIGTVLRQFSEVYERVELVKPKCSRS 174
Query: 190 ASAEIYLLGI-KYKAPAKI 207
S E +++ + K + P K+
Sbjct: 175 QSIECFVIAMSKRREPLKL 193
>gi|87119799|ref|ZP_01075696.1| cell division protein FtsJ [Marinomonas sp. MED121]
gi|86165275|gb|EAQ66543.1| cell division protein FtsJ [Marinomonas sp. MED121]
Length = 196
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 116/198 (58%), Gaps = 5/198 (2%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y + +++ GYRSRAS+KL++++ K L+S V+DL AAPGGW Q+A + +
Sbjct: 3 EHFDDVYVKRSQQDGYRSRASYKLIEINDKDKLLKSGMKVVDLGAAPGGWSQIAGRLIGD 62
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARV-KKVMEEHGVRAFDLVLHDGSPNVGG 125
V+ D++ +AP+ G ++ D T+ + + K + +EH DLV+ D +PN+ G
Sbjct: 63 KGRVVASDILEMAPLPGVTFVQGDFTEDDVYQEILKAIGDEHA----DLVISDMAPNMSG 118
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
A + LV ++ +A+Q L P G F+ KVF+ + + L ++ +F V KP
Sbjct: 119 NSAVDQPQSMYLVELALDMASQVLRPGGNFLVKVFQGEGFDEYLKTMRGMFTSVVTRKPE 178
Query: 186 ASRSASAEIYLLGIKYKA 203
+SR+ S E+YLLG ++K
Sbjct: 179 SSRARSREVYLLGRQFKG 196
>gi|311266963|ref|XP_003131335.1| PREDICTED: putative rRNA methyltransferase 3 [Sus scrofa]
Length = 836
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 126/213 (59%), Gaps = 24/213 (11%)
Query: 594 PKSTHNQVSEVEGD---FEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQ 650
P+S + GD FEIVP +D + D E I+A +KK R
Sbjct: 621 PRSQKRRRGPEAGDDDGFEIVPI------EDPARHRILDPEGLALGAIIASSKKAKR--- 671
Query: 651 REQILDDAYNRYMFDDDG--LPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAK 708
++DD+++RY F++D LP+WF++EE++HR P+ K+E+ + +++EI+ARP K
Sbjct: 672 --DLIDDSFSRYTFNEDEGELPEWFVQEEKQHRIRQLPLDKKEVEYYRKRWREINARPIK 729
Query: 709 KVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKE--Y 766
KVAEAKARKKR ++KLE+ +KKA + + DIS+R K Q+ LYK A + K++ Y
Sbjct: 730 KVAEAKARKKRRMLKKLEQTKKKAEAVVNTVDISEREKVAQLRSLYKKAGLGKEKRQVTY 789
Query: 767 VVAKKGV--QVRAGKGKV----LVDPRMKKDSR 793
VVAKKGV +VR G +VD RMKKD R
Sbjct: 790 VVAKKGVGRKVRRPAGVRGHFKVVDSRMKKDQR 822
>gi|296534248|ref|ZP_06896731.1| ribosomal RNA large subunit methyltransferase J [Roseomonas
cervicalis ATCC 49957]
gi|296265422|gb|EFH11564.1| ribosomal RNA large subunit methyltransferase J [Roseomonas
cervicalis ATCC 49957]
Length = 228
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 106/196 (54%), Gaps = 4/196 (2%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y R AK G+RSRA++KL++LD K+ L+ ++DL AAPGGW QVAVQR V
Sbjct: 35 DPYVRAAKAAGWRSRAAFKLIELDEKYKLLKPGQRIVDLGAAPGGWTQVAVQRAGDRGKV 94
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+GLDL+P+ I GA L+ D V ++ DLV+ D +PN G A +
Sbjct: 95 VGLDLLPMDVIAGATLLQGDFQDEAVEQAVLDALDGPA----DLVMSDMAPNTTGHNATD 150
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ LV ++ A + L P G F+ KVF+ +L LK+ + V KP ASR
Sbjct: 151 HLRILGLVELALDFADKVLVPGGAFIAKVFQGGTEREMLNRLKRDYATVRHAKPPASRKD 210
Query: 191 SAEIYLLGIKYKAPAK 206
SAE+Y++ Y+ K
Sbjct: 211 SAEMYVVAQGYRGEGK 226
>gi|119897677|ref|YP_932890.1| ribosomal RNA large subunit methyltransferase J [Azoarcus sp. BH72]
gi|143459390|sp|A1K598.1|RLME_AZOSB RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|119670090|emb|CAL94003.1| ribosomal RNA large subunit methyltransferase j [Azoarcus sp. BH72]
Length = 205
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 108/196 (55%), Gaps = 3/196 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y + A GYR+RA++KL+++D + LR V+DL AAPG W QVA QRV
Sbjct: 13 EHLNDTYVQRANAEGYRARAAYKLMEIDERDRLLRPGRVVVDLGAAPGSWCQVARQRVGS 72
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
VL LD++P+ P+ G L+ D T+ A ++ + V DLVL D +PN+ G
Sbjct: 73 DGRVLALDILPMDPVPGVDFLQGDFTEDAVLAELESRLAGAAV---DLVLSDMAPNLSGV 129
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ L ++ A + L P G F+ KVF+ + + + ++F V+V KP A
Sbjct: 130 ATVDQARSIYLCELALDFARRHLKPGGQFLVKVFQGEGFMGFRKAMDEVFLSVQVRKPKA 189
Query: 187 SRSASAEIYLLGIKYK 202
SR SAE+YLLG+ +
Sbjct: 190 SRDRSAEVYLLGVDLR 205
>gi|448737824|ref|ZP_21719857.1| 23S rRNA methyltransferase J [Halococcus thailandensis JCM 13552]
gi|445802786|gb|EMA53087.1| 23S rRNA methyltransferase J [Halococcus thailandensis JCM 13552]
Length = 251
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 111/204 (54%), Gaps = 7/204 (3%)
Query: 9 RLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGS 68
R D+YY AK+ GYRSR+++KL QLD V+DL AAPGGW+QVA +R P G
Sbjct: 3 RRDEYYNKAKQQGYRSRSAYKLQQLDETADLFADRSTVIDLGAAPGGWLQVAAERAPEGR 62
Query: 69 LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWA 128
V+G+D I I G + D+T + RA +K + E D+VL D +PN+ G +
Sbjct: 63 -VVGVDRQRIEAIDGVETRRGDLTDEDVRAELKADVGEA-----DVVLSDMAPNMSGEYN 116
Query: 129 QEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASR 188
+ L ++ +A + L P G V KVF +D + +++ FE V +P ASR
Sbjct: 117 LDHARSVHLARQALDVAREVLTPGGDLVVKVFDGRDLDDLEADIEEAFEYVRTVRPDASR 176
Query: 189 SASAEIYLLG-IKYKAPAKIDPRL 211
S+E+YL+G + AP ++ L
Sbjct: 177 DESSELYLVGKGRMTAPVEVGDEL 200
>gi|354479439|ref|XP_003501917.1| PREDICTED: putative rRNA methyltransferase 3 [Cricetulus griseus]
gi|344243070|gb|EGV99173.1| Putative rRNA methyltransferase 3 [Cricetulus griseus]
Length = 830
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/157 (47%), Positives = 108/157 (68%), Gaps = 12/157 (7%)
Query: 648 KKQREQILDDAYNRYMFDDDG--LPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDAR 705
KK + ++D+++NRY F++D LP+WF++EE++HR P+ K+E+ + +++EI+AR
Sbjct: 661 KKAKRDLIDNSFNRYAFNEDEGELPEWFVQEEKQHRIRQLPIDKKEVEHYRKRWREINAR 720
Query: 706 PAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKE 765
P KKVAEAKARKKR ++KLE+ +KKA + + DIS+R K Q+ LYK A + K++
Sbjct: 721 PIKKVAEAKARKKRRMLKKLEQTKKKAEAVVNTVDISEREKVAQLRSLYKKAGLGKEKRQ 780
Query: 766 --YVVAKKGV--QVR-----AGKGKVLVDPRMKKDSR 793
YVVAKKGV +VR G+ KV VD RMKKD R
Sbjct: 781 VTYVVAKKGVGRKVRRPAGVRGQFKV-VDSRMKKDQR 816
>gi|253997068|ref|YP_003049132.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylotenera mobilis
JLW8]
gi|253983747|gb|ACT48605.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylotenera mobilis
JLW8]
Length = 206
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 108/192 (56%), Gaps = 3/192 (1%)
Query: 8 HRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVG 67
H D Y +LA++ GYR+RA++KL+++D K ++ V+DL +APG W QV VQR+
Sbjct: 14 HLNDPYVKLAQKDGYRARAAYKLMEIDDKDKIIKPGMTVVDLGSAPGSWSQVTVQRLKGQ 73
Query: 68 SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAW 127
V+ LD++ + PI G ++ D + +++ + V DLV+ D +PN+ G
Sbjct: 74 GKVIALDILEMTPISGVTFIQGDFREDAVLKLLEQTLNNLQV---DLVIADMAPNISGVK 130
Query: 128 AQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAAS 187
+ L +++ + +L P G F+ KVF + +L ++Q+F KV KP AS
Sbjct: 131 DVDQAGAAYLTELALEFSKDWLKPNGNFLVKVFIGAGFEEILQSMRQMFTKVVTRKPKAS 190
Query: 188 RSASAEIYLLGI 199
R S+E+YLLGI
Sbjct: 191 RDRSSEVYLLGI 202
>gi|115496334|ref|NP_001068830.1| pre-rRNA processing protein FTSJ3 [Bos taurus]
gi|109659216|gb|AAI18407.1| FtsJ homolog 3 (E. coli) [Bos taurus]
Length = 834
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 125/211 (59%), Gaps = 27/211 (12%)
Query: 593 GPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQRE 652
GPKS E + FE+VP +D D E ++A +KK R
Sbjct: 627 GPKS------EDDDGFEVVPI------EDPVKHRILDPEGLALGALIASSKKAKR----- 669
Query: 653 QILDDAYNRYMFDDDG--LPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKV 710
++DD+++RY F++D LPDWF++EE++HR PV K+E+ + +++EI+ARP KKV
Sbjct: 670 DLIDDSFSRYTFNEDEGELPDWFVQEEKQHRIRQLPVDKKEVEHYRKRWREINARPIKKV 729
Query: 711 AEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKE--YVV 768
AEAKARKKR ++KLE+ +KKA + + DIS+R K Q+ LY+ A + K++ YVV
Sbjct: 730 AEAKARKKRRMLKKLEQTKKKAEAVVNTVDISEREKVAQLRSLYRKAGLGKEKRQVTYVV 789
Query: 769 AKKGV--QVRAGKGKV----LVDPRMKKDSR 793
AKKGV +VR G +VD RMKKD R
Sbjct: 790 AKKGVGRKVRRPAGVRGHFKVVDSRMKKDQR 820
>gi|387592292|gb|EIJ87316.1| hypothetical protein NEQG_02439 [Nematocida parisii ERTm3]
gi|387596339|gb|EIJ93961.1| hypothetical protein NEPG_01533 [Nematocida parisii ERTm1]
Length = 261
Score = 124 bits (311), Expect = 2e-25, Method: Composition-based stats.
Identities = 69/194 (35%), Positives = 111/194 (57%), Gaps = 5/194 (2%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D +YR AK GYR+R+++KL+++ +++ L + +V+DLCAAPG W QV +R+P L
Sbjct: 72 DVHYRKAKSEGYRARSAYKLLEIIEEYNILENVQSVIDLCAAPGSWSQVIKERLPHAHL- 130
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
L +DL I PI A+ ++ DIT + + +K G R DL+L DG+P V G +
Sbjct: 131 LSVDLQDIEPINDAIIVKGDITSDKTISEIKNTF---GARV-DLILCDGAPEVTGLHDLD 186
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
++L+ + L+ L+P G FV KVF D ++ LK+ F +V + KP +SR
Sbjct: 187 EYFHSSLITAACSLSRTLLSPSGCFVIKVFTGSDPEILMEDLKEYFSEVLIVKPKSSRIK 246
Query: 191 SAEIYLLGIKYKAP 204
S E + + + + P
Sbjct: 247 SKEAFAICHQIRIP 260
>gi|254491856|ref|ZP_05105035.1| ribosomal RNA large subunit methyltransferase J [Methylophaga
thiooxidans DMS010]
gi|224463334|gb|EEF79604.1| ribosomal RNA large subunit methyltransferase J [Methylophaga
thiooxydans DMS010]
Length = 205
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 111/192 (57%), Gaps = 3/192 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D+Y + A++ G+RSRA++KL ++D K LR +V+DL AAPGGW A ++V
Sbjct: 13 EHFDDQYVKKAQKEGHRSRATFKLDEIDQKDKLLRPGMSVVDLGAAPGGWSDYAFRKVGD 72
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ LD++P+ P+ G +E D + E + KV+ R DLVL D +PN+ G
Sbjct: 73 SGTVVALDILPMTPLTGVHFIEGDFREDEVLDELNKVLNG---REIDLVLSDMAPNMSGV 129
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ + + LV ++ A L+ +G F+ KVF+ + + + L ++ F KV KP A
Sbjct: 130 GSIDQPASMYLVELALDFAVNNLSKQGCFLVKVFQGEGFDAYLKQMRDSFNKVVTRKPGA 189
Query: 187 SRSASAEIYLLG 198
SR+ S E+YLLG
Sbjct: 190 SRARSREVYLLG 201
>gi|262094409|gb|ACY09334.1| cell division protein [Heliconius melpomene melpomene]
Length = 253
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 124/222 (55%), Gaps = 17/222 (7%)
Query: 14 YRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSL---- 69
YRLAKE G+R+R+++KL+Q++ +++ +DLCAAPG W QV +++ +
Sbjct: 1 YRLAKEEGWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQVLTKKLRQNTSNTDD 60
Query: 70 --VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAW 127
++ +DL +A + G ++ DITK + K E G++A DLV+ DG+P+V G
Sbjct: 61 VKIVAVDLQAMAALPGVKQIQGDITKISTAHEIXK--EFEGLKA-DLVVCDGAPDVTGLH 117
Query: 128 AQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAAS 187
+ Q+ L++ ++ + T L G FV K+FR +D + + LK F+ V V KP +S
Sbjct: 118 DIDEYVQSQLLLAALNITTHVLKEGGVFVAKIFRGKDVTLLYSQLKLFFDYVTVSKPRSS 177
Query: 188 RSASAEIYLLGIKYKAPAKIDPR----LLDVKYL----FQGS 221
R++S E +++ YKAP P LLD KY F GS
Sbjct: 178 RNSSIEAFVICQNYKAPPGYVPTMVNPLLDHKYCNFNQFTGS 219
>gi|148261003|ref|YP_001235130.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Acidiphilium cryptum
JF-5]
gi|326404403|ref|YP_004284485.1| ribosomal RNA large subunit methyltransferase J [Acidiphilium
multivorum AIU301]
gi|338990646|ref|ZP_08634478.1| Ribosomal RNA large subunit methyltransferase J [Acidiphilium sp.
PM]
gi|189044083|sp|A5G029.1|RLME_ACICJ RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|146402684|gb|ABQ31211.1| 23S rRNA Um-2552 2'-O-methyltransferase [Acidiphilium cryptum JF-5]
gi|325051265|dbj|BAJ81603.1| ribosomal RNA large subunit methyltransferase J [Acidiphilium
multivorum AIU301]
gi|338205457|gb|EGO93761.1| Ribosomal RNA large subunit methyltransferase J [Acidiphilium sp.
PM]
Length = 225
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 107/192 (55%), Gaps = 6/192 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y AKE G+RSRA++KL++LD KF + V+DL AAPGGW QVA++R S V
Sbjct: 36 DPYVAAAKERGFRSRAAFKLIELDEKFGLIGKGARVVDLGAAPGGWTQVALER--GASRV 93
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL+ I PI GA ++ D + +++ D+V+ D +PN G A +
Sbjct: 94 VGIDLLDIDPIAGATLIKGDFQDESMETALAEILGGPA----DVVMSDMAPNTTGHTATD 149
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ L ++ A + LAP G FVTK+F+ +L LK+ F +V KP ASR
Sbjct: 150 HLRIMGLAELALDFAFKHLAPGGAFVTKLFQGGAQGDMLNLLKRRFAQVRHAKPEASRKD 209
Query: 191 SAEIYLLGIKYK 202
S E+YL+ Y+
Sbjct: 210 SRELYLVATGYR 221
>gi|62857467|ref|NP_001016817.1| FtsJ RNA methyltransferase homolog 1 [Xenopus (Silurana)
tropicalis]
gi|89273969|emb|CAJ81745.1| FtsJ homolog 1 (E. coli) [Xenopus (Silurana) tropicalis]
Length = 335
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 122/217 (56%), Gaps = 10/217 (4%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE G+R+R+++KL+QLD ++ + +DLCAAPG W QV
Sbjct: 1 MGR-SSKDKRDIYYRLAKEEGWRARSAFKLLQLDEEYRLFQGVQRAVDLCAAPGSWSQVL 59
Query: 61 VQRV-----PVGSL-VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114
+++ G + ++ +DL +AP+ G + ++ DITK + + E + DL
Sbjct: 60 SRKLRGSEEQSGQVKIVAVDLQAMAPLPGVIQIQGDITKVSTAHEIIRHFEG---QPADL 116
Query: 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQ 174
V+ DG+P+V G + Q L++ ++ + T L GTFV K+FR +D + + L+
Sbjct: 117 VVCDGAPDVTGLHDIDEYIQAQLLLAALNITTHVLRDGGTFVAKIFRGKDVTLLYSQLQI 176
Query: 175 LFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
F +V KP +SR++S E +++ Y+ P P +
Sbjct: 177 FFREVTCAKPRSSRNSSIEAFVVCQGYRPPEGYVPNM 213
>gi|358449512|ref|ZP_09159996.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Marinobacter
manganoxydans MnI7-9]
gi|357226267|gb|EHJ04748.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Marinobacter
manganoxydans MnI7-9]
Length = 206
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 115/197 (58%), Gaps = 3/197 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D + + A+ GYRSRAS+KL++++ K + + V+DL +APGGW QVA + V
Sbjct: 13 EHVNDPFVKQAQVDGYRSRASYKLLEINKKDRLIHPNMVVVDLGSAPGGWSQVAAKLVGH 72
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ D++P+ I G ++ D T+ + + +M G D+V+ D +PN+ G
Sbjct: 73 KGRVIASDILPMDAIAGVDFIQGDFTENDV---FESIMATLGGDPVDVVISDMAPNISGV 129
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ + LV ++ +A+Q L PKG+F+ KVF+ + Y L ++ +F+KV V KP +
Sbjct: 130 TVADQAASMYLVELALDMASQVLKPKGSFLAKVFQGEGYDEYLKSVRAVFDKVVVRKPDS 189
Query: 187 SRSASAEIYLLGIKYKA 203
SRS S E+Y+LG +K
Sbjct: 190 SRSRSREVYILGKGFKG 206
>gi|429966197|gb|ELA48194.1| 23S rRNA (uridine(2552)-2'-O-)-methyltransferase [Vavraia culicis
'floridensis']
Length = 259
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 115/201 (57%), Gaps = 7/201 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D YYRLAKE+ YR+R+++K+ Q+D + L + V+DLCAAPGGW QV ++ + V
Sbjct: 10 DIYYRLAKENDYRARSAYKIKQIDEHYKILHGNTTVVDLCAAPGGWTQVVAEKC---AKV 66
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKK---VMEEHGVRAFDLVLHDGSPNVGGAW 127
+ +D+ I + + +++DIT C V K + + DLVL DG+ N+ G
Sbjct: 67 VAVDIQDILTMDDVIFIKEDITSNSCTELVLKSVHFLNNNENAKADLVLCDGASNISGMP 126
Query: 128 AQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAAS 187
+ Q++++ ++KLA + TFV K++R D S+VL +++E VE+ KP S
Sbjct: 127 DVDVHVQHSILCSALKLAGKISRAGSTFVGKLYRDGDVSTVLKRFLEVYEHVELAKPKCS 186
Query: 188 RSASAEIYLLGI-KYKAPAKI 207
RS S E +++ + K P KI
Sbjct: 187 RSLSIECFVVAMSKRLKPVKI 207
>gi|152995050|ref|YP_001339885.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Marinomonas sp. MWYL1]
gi|150835974|gb|ABR69950.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Marinomonas sp. MWYL1]
Length = 196
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 114/197 (57%), Gaps = 3/197 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y + +++ GYRSRAS+KL++++ K + + V+DL AAPGGW QVA + V
Sbjct: 3 EHFDDPYVKKSQQDGYRSRASYKLIEINDKDKLFKPAMRVVDLGAAPGGWSQVAAKLVGD 62
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
++ D++ +AP+ G ++ D T+ E + ++ E G + DLV+ D +PN+ G
Sbjct: 63 HGTIVASDILEMAPLPGVSFVQGDFTEQEV---YEAILAEIGDKKADLVISDMAPNMSGN 119
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ + LV ++ +A Q L P G F+ KVF+ + + L ++ F+ V KP A
Sbjct: 120 SSSDQPQAMYLVELALDMAAQVLRPGGNFLVKVFQGEGFEEYLKTMRAQFDSVVTRKPDA 179
Query: 187 SRSASAEIYLLGIKYKA 203
SR+ S E+YLLG +YK
Sbjct: 180 SRARSREVYLLGRQYKG 196
>gi|378822243|ref|ZP_09845052.1| ribosomal RNA large subunit methyltransferase J [Sutterella
parvirubra YIT 11816]
gi|378598935|gb|EHY32014.1| ribosomal RNA large subunit methyltransferase J [Sutterella
parvirubra YIT 11816]
Length = 217
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 112/203 (55%), Gaps = 8/203 (3%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP- 65
+H D + + ++ GYR+R+ +KL +LD + LR V+DL AAPG W Q+ +R+
Sbjct: 17 RHINDPFVKRSRAEGYRARSVYKLTELDDREHLLRRGMTVVDLGAAPGSWTQIVRERLSD 76
Query: 66 ----VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
V ++ +D++P+ PI G L+ D + + ++ +++ V D+VL D +P
Sbjct: 77 KEGRVQGRIIAMDILPMDPIEGVTFLQGDFREQDVADKLSEILNGDKV---DVVLSDMAP 133
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
N+ G A +A L + + + L P G FVTK F+ YS + LK+ F+KV
Sbjct: 134 NLSGIAAADAARSLLLNELAHEFCLEHLKPTGVFVTKAFQGSGYSQFVEALKKSFKKVYT 193
Query: 182 DKPAASRSASAEIYLLGIKYKAP 204
KPAASR SAE+YL+ + KAP
Sbjct: 194 RKPAASRDTSAEVYLVARELKAP 216
>gi|262094425|gb|ACY09342.1| cell division protein [Heliconius melpomene melpomene]
Length = 253
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 124/222 (55%), Gaps = 17/222 (7%)
Query: 14 YRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSL---- 69
YRLAKE G+R+R+++KL+Q++ +++ +DLCAAPG W QV +++ +
Sbjct: 1 YRLAKEEGWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQVLTKKLRQNTSNTDD 60
Query: 70 --VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAW 127
++ +DL +A + G ++ DITK + K E G++A DLV+ DG+P+V G
Sbjct: 61 VKIVAVDLQAMAALPGVKQIQGDITKISTAHEIIK--EFEGLKA-DLVVCDGAPDVTGLH 117
Query: 128 AQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAAS 187
+ Q+ L++ ++ + T L G FV K+FR +D + + LK F+ V V KP +S
Sbjct: 118 DIDEYVQSQLLLAALNITTHVLKEGGVFVAKIFRGKDVTLLYSQLKLFFDHVTVSKPRSS 177
Query: 188 RSASAEIYLLGIKYKAPAKIDPR----LLDVKYL----FQGS 221
R++S E +++ YKAP P LLD KY F GS
Sbjct: 178 RNSSIEAFVICQNYKAPPGYVPTMVNPLLDHKYCNFNQFTGS 219
>gi|358333999|dbj|GAA52447.1| tRNA methyltransferase [Clonorchis sinensis]
Length = 278
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 131/227 (57%), Gaps = 22/227 (9%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHA-----VLDLCAAPGG 55
MGK + + D YYRLAKE G+R+R+++KL+Q+D +F L+SS + V+DLCAAPG
Sbjct: 1 MGK-SSRDKRDIYYRLAKEEGWRARSAYKLMQIDDEFGILKSSDSDPLERVVDLCAAPGS 59
Query: 56 WMQVAVQRV--PVGS------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEH 107
W QV +R+ P + ++ +DL +API G + ++ DIT R +++E
Sbjct: 60 WSQVLAKRLWEPKSAENREKVKIVAVDLQAMAPIPGVIQIQGDITT---RKTANEIIERF 116
Query: 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSS 167
+ LV+ DG+P+V G + Q+ L++ ++ + ++ L GTFV KVFR +D
Sbjct: 117 EGKLAQLVVCDGAPDVTGLHDLDEYVQSHLILAALTICSRILQHGGTFVAKVFRGRDAGL 176
Query: 168 VLYCLKQLFE-KVEVDKPAASRSASAEIYLLGIKYKAP----AKIDP 209
+ L+ LF+ +V KP +SR++S E +++ + P + +DP
Sbjct: 177 LGSQLRCLFDGQVTFAKPKSSRNSSLEAFVVCQGFSGPRMLSSSVDP 223
>gi|262094385|gb|ACY09322.1| cell division protein [Heliconius melpomene rosina]
gi|262094435|gb|ACY09347.1| cell division protein [Heliconius melpomene rosina]
Length = 253
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 124/222 (55%), Gaps = 17/222 (7%)
Query: 14 YRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSL---- 69
YRLAKE G+R+R+++KL+Q++ +++ +DLCAAPG W QV +++ +
Sbjct: 1 YRLAKEEGWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQVLTKKLRQNTSNTDD 60
Query: 70 --VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAW 127
++ +DL +A + G ++ DITK + K E G++A DLV+ DG+P+V G
Sbjct: 61 VKIVAVDLQAMAALPGVKQIQGDITKISTAHEIIK--EFEGLKA-DLVVCDGAPDVTGLH 117
Query: 128 AQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAAS 187
+ Q+ L++ ++ + T L G FV K+FR +D + + LK F+ V V KP +S
Sbjct: 118 DIDEYVQSQLLLAALNITTHVLKEGGVFVAKIFRGKDVTLLYSQLKLFFDXVTVSKPRSS 177
Query: 188 RSASAEIYLLGIKYKAPAKIDPR----LLDVKYL----FQGS 221
R++S E +++ YKAP P LLD KY F GS
Sbjct: 178 RNSSIEAFVICQNYKAPPGYVPTMVNPLLDHKYCNFNQFTGS 219
>gi|87198497|ref|YP_495754.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Novosphingobium
aromaticivorans DSM 12444]
gi|123490739|sp|Q2GB53.1|RLME_NOVAD RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|87134178|gb|ABD24920.1| 23S rRNA Um-2552 2'-O-methyltransferase [Novosphingobium
aromaticivorans DSM 12444]
Length = 222
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 103/193 (53%), Gaps = 5/193 (2%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y + AK G+RSRA++KL++LD KF L+ + V+DL APGGW QV ++ P +V
Sbjct: 32 DPYVKKAKAEGWRSRAAFKLIELDEKFGLLKGAKRVVDLGIAPGGWSQVVRKKAPAAKIV 91
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
G+DL+P PI G E D E ++ ++ DLVL D + N G +
Sbjct: 92 -GIDLLPTEPIEGVTIFEMDFMADEAPEALQSALDGPP----DLVLSDMAANTVGHKQTD 146
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ LV +V A Q LAP G FV KVF + +L LK+ F V+ KP ASR
Sbjct: 147 HLRTMGLVETAVDFAVQTLAPGGAFVAKVFAGGTDTELLAILKKNFTTVKHAKPPASRKD 206
Query: 191 SAEIYLLGIKYKA 203
S+E Y++ +K
Sbjct: 207 SSEWYVIAQGFKG 219
>gi|209963501|ref|YP_002296416.1| ribosomal RNA large subunit methyltransferase J [Rhodospirillum
centenum SW]
gi|209956967|gb|ACI97603.1| ribosomal RNA large subunit methyltransferase J,RrmJ
[Rhodospirillum centenum SW]
Length = 227
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 109/204 (53%), Gaps = 8/204 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVG--- 67
D Y A++ GYRSRA++KL+QLD KF FLR ++DL AAPGGW QVAV V G
Sbjct: 23 DPYVAEARKRGYRSRAAFKLLQLDEKFHFLRRGQRIVDLGAAPGGWTQVAVAVVKPGEGS 82
Query: 68 -SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+GLDL+ + P+ GA ++ D R+K+++ D+VL D + N G
Sbjct: 83 TGKVVGLDLLEVEPVPGATIIQLDFLDASAPDRLKELLGGQA----DIVLSDMAANTTGH 138
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
A + + L + A LAP G FV K+F+ +L LK+ F V KP A
Sbjct: 139 PATDHLRIIGLAEAAYDFAADVLAPGGAFVCKLFQGGATKGLLDLLKRDFATVRHAKPPA 198
Query: 187 SRSASAEIYLLGIKYKAPAKIDPR 210
SR+ S+E Y++ ++ + D R
Sbjct: 199 SRADSSETYVVATGFRGSSSADDR 222
>gi|288559850|ref|YP_003423336.1| ribosomal RNA large subunit methyltransferase J RrmJ
[Methanobrevibacter ruminantium M1]
gi|288542560|gb|ADC46444.1| ribosomal RNA large subunit methyltransferase J RrmJ
[Methanobrevibacter ruminantium M1]
Length = 213
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 112/194 (57%), Gaps = 6/194 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D YYR AK YRSRAS+KL QLD K+ ++ + V+DL AAPGGW QVA+++V +V
Sbjct: 12 DPYYRRAKSEEYRSRASYKLKQLDKKYKIIKEGNTVVDLGAAPGGWSQVALEKVGEEGIV 71
Query: 71 LGLDLVPIAPI--RGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWA 128
+G+DL I P + + D TK + K+ME +A +++ D +P++ G
Sbjct: 72 VGVDLNRIKPFPEKNFYGIRGDFTKEIVQ---DKIMELTNGKA-KVLISDAAPSLTGIKT 127
Query: 129 QEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASR 188
+ ++ LV +K+A L +G V K F+ +Y +L +KQ F KV+ KP +SR
Sbjct: 128 IDHLNSVDLVETVIKIADNILETEGNMVIKAFQGPEYKRLLDEIKQDFRKVKSTKPPSSR 187
Query: 189 SASAEIYLLGIKYK 202
S E+Y++G+ Y+
Sbjct: 188 HRSKEMYIVGLGYR 201
>gi|449663261|ref|XP_002156663.2| PREDICTED: putative ribosomal RNA methyltransferase 1-like [Hydra
magnipapillata]
Length = 299
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 120/217 (55%), Gaps = 10/217 (4%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE G+R+R+++KL+Q++ +F + + V+DLCAAPG W QV
Sbjct: 1 MGR-SSKDKRDVYYRLAKEGGWRARSAFKLLQINEEFDLFTNVNRVVDLCAAPGSWSQVL 59
Query: 61 VQRVP------VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114
+++ ++ +DL +AP+ G + ++ DITK + +++ DL
Sbjct: 60 SRKLIEERDQKNAVKIVAVDLQAMAPLPGVIQIQGDITK---VSTANEIISHFEGEPADL 116
Query: 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQ 174
V+ DG+P+V G + Q L++ + + + L G FV K+FR +D + + +K
Sbjct: 117 VVCDGAPDVTGLHDIDEYIQGQLLLAAFNITSHVLKKGGNFVAKIFRGKDVNLLYSQMKL 176
Query: 175 LFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
F V V KP +SR++S E +++ + Y P P +
Sbjct: 177 FFTDVTVCKPRSSRNSSIEAFIVCLNYFPPEGYIPTM 213
>gi|194899566|ref|XP_001979330.1| GG14838 [Drosophila erecta]
gi|190651033|gb|EDV48288.1| GG14838 [Drosophila erecta]
Length = 321
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 122/217 (56%), Gaps = 12/217 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D +YRLAKE G+R+R+++KL+Q + F L +DLCAAPG W QV
Sbjct: 1 MGRT-SKDKRDIFYRLAKEQGWRARSAFKLLQAEETFQLLEGLTRAVDLCAAPGSWSQVL 59
Query: 61 VQRV--PVGS------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAF 112
+R+ P+ ++ +DL +API G L DI+K + + ++E G
Sbjct: 60 AKRMYEPLPPEEREKVKIIAVDLQGMAPIEGVKQLRADISK---ESTAEAIIEFFGGEKA 116
Query: 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCL 172
+V+ DG+P+ G ++ Q L++ ++ ++T L G+FV+K++RS S + L
Sbjct: 117 QIVVSDGAPDSTGMHDFDSYVQGELLLSALSISTFILEEGGSFVSKIYRSDRTSRLYIQL 176
Query: 173 KQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDP 209
K+ F+ V V KP+ASR++S E +++ K+ P P
Sbjct: 177 KRFFKDVCVFKPSASRNSSIEAFVVARKFCLPEGYKP 213
>gi|403342831|gb|EJY70740.1| Ribosomal RNA methyltransferase [Oxytricha trifallax]
Length = 262
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 115/203 (56%), Gaps = 13/203 (6%)
Query: 9 RLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV-- 66
+ D YYR AKE GYR+R+++KL+Q+D +F + +DLCAAPG W QV ++
Sbjct: 17 KTDIYYRKAKEEGYRARSAYKLLQIDDEFKIFQDVVRAVDLCAAPGSWSQVLANKLYSSD 76
Query: 67 --------GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
V+ +DL +API G ++ DIT + +V V + G +A DLV+ D
Sbjct: 77 DERKNSEENVKVVSVDLQEMAPIDGVSIIQGDITTQQTLEKVLAVFK--GNKA-DLVVSD 133
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+P+V G + Q L+ ++ + L GTFV K F+S D S + +KQ+F+
Sbjct: 134 GAPDVTGFHEIDQYLQAQLLQAALTITQHMLREGGTFVAKFFKSNDLSYLYVMMKQIFKN 193
Query: 179 VEVDKPAASRSASAEIYLLGIKY 201
V V KP +SR++SAE +++G+ +
Sbjct: 194 VYVVKPQSSRASSAEAFVIGLGF 216
>gi|194742497|ref|XP_001953739.1| GF17080 [Drosophila ananassae]
gi|190626776|gb|EDV42300.1| GF17080 [Drosophila ananassae]
Length = 301
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 133/250 (53%), Gaps = 23/250 (9%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+ +D + L +DLCAAPG W QV
Sbjct: 1 MGKTS-KDKRDIYYRQAKEEGWRARSAFKLLHVDEAYGILNGVQRAVDLCAAPGSWSQVL 59
Query: 61 VQRV---------PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRA 111
+++ ++ +DL +APIRG + L+ DITK ++ + ++ G
Sbjct: 60 SRKLYDTCQTDDEKAAVKIIAVDLQAMAPIRGVIQLQGDITK---QSTAEAIIGHFGDNK 116
Query: 112 FD---LVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSV 168
D LV+ DG+P+V G + Q+ L++ ++ +AT L GTFV K+F+ +
Sbjct: 117 EDKAQLVVCDGAPDVTGVHEMDEYMQHQLLVAALSIATCVLETGGTFVAKIFKGNATWLL 176
Query: 169 LYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLL-----DVKYLFQ--GS 221
+K F+K ++ KP +SR +S E +++ + P P+++ D++ L Q GS
Sbjct: 177 SSQMKIFFKKFDIYKPPSSRPSSIEAFVVCSDFCLPTGYIPQVINTARDDIRILAQKTGS 236
Query: 222 VEPRKVVDVL 231
RK+V +
Sbjct: 237 EVNRKLVPFI 246
>gi|328848748|gb|EGF97947.1| hypothetical protein MELLADRAFT_84132 [Melampsora larici-populina
98AG31]
Length = 294
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 116/222 (52%), Gaps = 19/222 (8%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSH----AVLDLCAAPGGW 56
MGK R D +YRL+K GYR+R+++KL+ LD + + + V+DLCAAPG W
Sbjct: 1 MGKCSKDQR-DIFYRLSKSEGYRARSAYKLIHLDQHYHLFNNPNQPIKTVVDLCAAPGSW 59
Query: 57 MQVAVQRVPVGSL---------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEH 107
QV V ++ G ++ +DL P+AP+ G L DIT+ E + +M
Sbjct: 60 SQVLVNKL--GHHPELHDELPKIVAVDLQPMAPLSGVHQLMGDITQIE---TAQAIMSYF 114
Query: 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSS 167
+ DLV+ DG+P+V G + Q L++ ++ + L G+FV K+F+ +D
Sbjct: 115 NGQKTDLVVCDGAPDVTGLHDLDEFVQAQLLLAALNITLSLLREGGSFVAKIFKGRDVGL 174
Query: 168 VLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDP 209
+L L FE+V KP +SR +S E +++ YK P P
Sbjct: 175 LLSQLDCFFEEVSTFKPKSSRDSSIESFVICRNYKPPIGFIP 216
>gi|262094381|gb|ACY09320.1| cell division protein [Heliconius melpomene rosina]
gi|262094383|gb|ACY09321.1| cell division protein [Heliconius melpomene rosina]
gi|262094387|gb|ACY09323.1| cell division protein [Heliconius melpomene rosina]
gi|262094389|gb|ACY09324.1| cell division protein [Heliconius melpomene rosina]
gi|262094391|gb|ACY09325.1| cell division protein [Heliconius melpomene rosina]
gi|262094393|gb|ACY09326.1| cell division protein [Heliconius melpomene rosina]
gi|262094395|gb|ACY09327.1| cell division protein [Heliconius melpomene rosina]
gi|262094397|gb|ACY09328.1| cell division protein [Heliconius melpomene rosina]
gi|262094399|gb|ACY09329.1| cell division protein [Heliconius melpomene melpomene]
gi|262094403|gb|ACY09331.1| cell division protein [Heliconius melpomene melpomene]
gi|262094405|gb|ACY09332.1| cell division protein [Heliconius melpomene melpomene]
gi|262094411|gb|ACY09335.1| cell division protein [Heliconius melpomene melpomene]
gi|262094415|gb|ACY09337.1| cell division protein [Heliconius melpomene melpomene]
gi|262094417|gb|ACY09338.1| cell division protein [Heliconius melpomene melpomene]
gi|262094419|gb|ACY09339.1| cell division protein [Heliconius melpomene melpomene]
gi|262094421|gb|ACY09340.1| cell division protein [Heliconius melpomene melpomene]
gi|262094423|gb|ACY09341.1| cell division protein [Heliconius melpomene melpomene]
gi|262094427|gb|ACY09343.1| cell division protein [Heliconius melpomene rosina]
gi|262094429|gb|ACY09344.1| cell division protein [Heliconius melpomene rosina]
gi|262094431|gb|ACY09345.1| cell division protein [Heliconius melpomene rosina]
gi|262094433|gb|ACY09346.1| cell division protein [Heliconius melpomene rosina]
Length = 253
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 124/222 (55%), Gaps = 17/222 (7%)
Query: 14 YRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSL---- 69
YRLAKE G+R+R+++KL+Q++ +++ +DLCAAPG W QV +++ +
Sbjct: 1 YRLAKEEGWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQVLTKKLRQNTSNTDD 60
Query: 70 --VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAW 127
++ +DL +A + G ++ DITK + K E G++A DLV+ DG+P+V G
Sbjct: 61 VKIVAVDLQAMAALPGVKQIQGDITKISTAHEIIK--EFEGLKA-DLVVCDGAPDVTGLH 117
Query: 128 AQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAAS 187
+ Q+ L++ ++ + T L G FV K+FR +D + + LK F+ V V KP +S
Sbjct: 118 DIDEYVQSQLLLAALNITTHVLKEGGVFVAKIFRGKDVTLLYSQLKLFFDYVTVSKPRSS 177
Query: 188 RSASAEIYLLGIKYKAPAKIDPR----LLDVKYL----FQGS 221
R++S E +++ YKAP P LLD KY F GS
Sbjct: 178 RNSSIEAFVICQNYKAPPGYVPTMVNPLLDHKYCNFNQFTGS 219
>gi|301778303|ref|XP_002924561.1| PREDICTED: putative rRNA methyltransferase 3-like [Ailuropoda
melanoleuca]
gi|281351660|gb|EFB27244.1| hypothetical protein PANDA_013937 [Ailuropoda melanoleuca]
Length = 831
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 126/213 (59%), Gaps = 22/213 (10%)
Query: 593 GPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQRE 652
G K + SE +G FE+VP +D D E I+A +KK R
Sbjct: 619 GKKRSRGLKSEDDG-FEVVPI------EDPVKHRILDPEGLALGAIIASSKKAKR----- 666
Query: 653 QILDDAYNRYMFDDDG--LPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKV 710
++DD+++RY F+++ LP+WF++EE++HR PV K+E+ + +++EI+ARP KKV
Sbjct: 667 DLIDDSFSRYTFNEEEGELPEWFVQEEKQHRIRQLPVDKKEVEHYRRRWREINARPIKKV 726
Query: 711 AEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKE--YVV 768
AEAKARKKR ++KLE+ +KKA + + DIS+R K Q+ LYK A + K++ YVV
Sbjct: 727 AEAKARKKRRMLKKLEQTKKKAEAVMNTVDISEREKVAQLRSLYKKAGLGKEKRQVTYVV 786
Query: 769 AKKGV--QVRAGKGKV----LVDPRMKKDSRTH 795
AKKGV +VR G +VD RMKKD R
Sbjct: 787 AKKGVGRKVRRPAGVRGHFKVVDSRMKKDQRAQ 819
>gi|389691027|ref|ZP_10179920.1| 23S rRNA methylase [Microvirga sp. WSM3557]
gi|388589270|gb|EIM29559.1| 23S rRNA methylase [Microvirga sp. WSM3557]
Length = 232
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 112/199 (56%), Gaps = 4/199 (2%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y AK GYRSRA++KL+++D K+ L+ ++DL AAPGGW Q+A ++V +
Sbjct: 36 DPYVARAKREGYRSRAAFKLIEIDDKYKILKPGQRIVDLGAAPGGWSQIAAKKVGPKGKI 95
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL+PI P+ G +E D AR ++E G A D+V+ D + N G +
Sbjct: 96 VGIDLLPIDPMAGVEFIELDFLDESAPAR---LIEMLGGPA-DVVMSDMAANTTGHKKTD 151
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ L ++ A + LAP G FV KVF+ + +L LK+ F V KPAASR+
Sbjct: 152 HLRIIGLAEAAIYFAREILAPGGAFVAKVFQGGTENQLLADLKRDFAVVRHVKPAASRAD 211
Query: 191 SAEIYLLGIKYKAPAKIDP 209
SAE+Y+L ++ A+ P
Sbjct: 212 SAELYVLATGFRGRAEETP 230
>gi|222445937|ref|ZP_03608452.1| hypothetical protein METSMIALI_01585 [Methanobrevibacter smithii
DSM 2375]
gi|222435502|gb|EEE42667.1| ribosomal RNA large subunit methyltransferase J [Methanobrevibacter
smithii DSM 2375]
Length = 217
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 111/193 (57%), Gaps = 6/193 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D YY+ AK+ YRSRAS+K+ QLD KF ++ V+DL AAPGGW QVA+++V LV
Sbjct: 12 DPYYKKAKKEDYRSRASYKIKQLDKKFKLIKEGDTVVDLGAAPGGWSQVALEKVGEEGLV 71
Query: 71 LGLDLVPIAPI--RGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWA 128
+G+DL I P + D T E + +KVM G +A +++ D SP++ G
Sbjct: 72 IGVDLNRIKPFPEENFHGIRGDFTTTEVQ---EKVMNLIGGKA-KVIISDASPSLCGIKN 127
Query: 129 QEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASR 188
+ + L + +A L PKG V KVF+ +Y +L LK+ + +V+ KP +SR
Sbjct: 128 IDQLRSIDLTNTVIGIADNILEPKGNLVMKVFQGPEYKDMLTRLKKKYRQVKTTKPPSSR 187
Query: 189 SASAEIYLLGIKY 201
S+E+Y++G+ +
Sbjct: 188 KKSSEMYVVGLDF 200
>gi|222110672|ref|YP_002552936.1| ribosomal RNA methyltransferase rrmj/ftsj [Acidovorax ebreus TPSY]
gi|221730116|gb|ACM32936.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Acidovorax ebreus TPSY]
Length = 220
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 114/203 (56%), Gaps = 11/203 (5%)
Query: 8 HRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV--- 64
H D Y +LA++ GYR+RA++KL ++D + ++ H V+DL ++PG W Q +R+
Sbjct: 18 HVNDTYVKLAQKEGYRARAAYKLKEIDEQLGLIKPGHVVVDLGSSPGAWSQYVRRRLSPD 77
Query: 65 --PVGSL---VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDG 119
VG L ++ LD++P+ PI G L+ D + E AR+++ ++ R D+V+ D
Sbjct: 78 GAAVGQLNGVIIALDILPMEPIEGVTFLQGDFREEEVLARLQEAVQG---RPVDVVVSDM 134
Query: 120 SPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKV 179
+PN+ G + +A+ L+ +V A L P+G V K+F YS ++ K F V
Sbjct: 135 APNLSGVESVDAVRIAHLIELAVDFAVHHLKPEGALVVKLFHGSGYSQLVQLFKDTFRVV 194
Query: 180 EVDKPAASRSASAEIYLLGIKYK 202
+ KP ASR S+E +L+G+ K
Sbjct: 195 KPMKPKASRDKSSETFLVGMGLK 217
>gi|333909215|ref|YP_004482801.1| ribosomal RNA large subunit methyltransferase E [Marinomonas
posidonica IVIA-Po-181]
gi|333479221|gb|AEF55882.1| Ribosomal RNA large subunit methyltransferase E [Marinomonas
posidonica IVIA-Po-181]
Length = 206
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 114/197 (57%), Gaps = 3/197 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y + +++ GYRSRAS+KL++++ K +R +V+DL AAPGGW Q+A + +
Sbjct: 13 EHFDDPYVKKSQQDGYRSRASYKLIEINDKDKLIRPGMSVVDLGAAPGGWSQIAAKLIGD 72
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
++ D++ +AP+ G ++ D T+ E + ++ E G + DLV+ D +PN+ G
Sbjct: 73 KGTIVASDILEMAPLPGVRFVQGDFTEQEV---YEAILAEIGDQKADLVISDMAPNMSGN 129
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ + LV ++ +A L P G F+ KVF+ + + L +++ F V KP A
Sbjct: 130 SSSDQPQAMYLVELALDMAAHVLRPGGNFLVKVFQGEGFEEYLKAMREQFGSVVTRKPDA 189
Query: 187 SRSASAEIYLLGIKYKA 203
SR+ S E+YLLG +YK
Sbjct: 190 SRARSREVYLLGRQYKG 206
>gi|332188162|ref|ZP_08389891.1| ftsJ-like methyltransferase family protein [Sphingomonas sp. S17]
gi|332011769|gb|EGI53845.1| ftsJ-like methyltransferase family protein [Sphingomonas sp. S17]
Length = 231
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 107/193 (55%), Gaps = 5/193 (2%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y R AK GYRSRA++KL++LD +F FLR ++DL APGGW QV +++P + V
Sbjct: 32 DPYVRRAKAEGYRSRAAYKLIELDERFGFLRGKKRIIDLGIAPGGWSQVVRRKLP-NAAV 90
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL+P+ PI G E D A ++ME G A DLV+ D + N G +
Sbjct: 91 VGIDLLPVDPIDGVTIFEMDFMD---DAAPDRLMEALG-GAPDLVMSDMAANTVGHPQTD 146
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
A+ LV + A L+P G FV+KVF S ++ +K+ F V+ KP +SR
Sbjct: 147 ALRTMGLVETAFAFACDVLSPGGVFVSKVFAGGADSQLVAEMKRHFATVKHAKPPSSRKG 206
Query: 191 SAEIYLLGIKYKA 203
S E +++ +K
Sbjct: 207 SVEWFVVAQGFKG 219
>gi|262094413|gb|ACY09336.1| cell division protein [Heliconius melpomene melpomene]
Length = 253
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 124/222 (55%), Gaps = 17/222 (7%)
Query: 14 YRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSL---- 69
YRLAKE G+R+R+++KL+Q++ +++ +DLCAAPG W QV +++ +
Sbjct: 1 YRLAKEEGWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQVLTKKLRQNTSNTDD 60
Query: 70 --VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAW 127
++ +DL +A + G ++ DITK + K E G++A DLV+ DG+P+V G
Sbjct: 61 VKIVAVDLQAMAALPGVKQIQGDITKISTAHEIIK--EFEGLKA-DLVVCDGAPDVTGLH 117
Query: 128 AQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAAS 187
+ Q+ L++ ++ + T L G FV K+FR +D + + LK F+ V V KP +S
Sbjct: 118 DIDEYVQSQLLLAALNITTHXLKEGGVFVAKIFRGKDVTLLYSQLKLFFDYVTVSKPRSS 177
Query: 188 RSASAEIYLLGIKYKAPAKIDPR----LLDVKYL----FQGS 221
R++S E +++ YKAP P LLD KY F GS
Sbjct: 178 RNSSIEAFVICQNYKAPPGYVPTMVNPLLDHKYCNFNQFTGS 219
>gi|397572922|gb|EJK48467.1| hypothetical protein THAOC_32733 [Thalassiosira oceanica]
Length = 327
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 124/229 (54%), Gaps = 32/229 (13%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSS----------------- 43
MGK+ R D +YRLAKE GYR+R+++KL+Q+DS+F L S
Sbjct: 1 MGKLSRDKR-DVFYRLAKESGYRARSAYKLLQIDSRFHLLGPSTDDNDDGTSRTDGSDGW 59
Query: 44 -----HAVLDLCAAPGGWMQVAVQ---RVPVGSL---VLGLDLVPIAPIRGAVSLEQDIT 92
H +DLCAAPGGW QV Q RV S ++ +DL PI P+ G + DIT
Sbjct: 60 RPPRVHRAVDLCAAPGGWSQVLAQCMERVCEISHRPSIVAVDLWPIEPLDGVKFIRGDIT 119
Query: 93 KPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPK 152
+ + + E G RA +LV+ DG+P+V + + Q+ L++ ++ +AT +
Sbjct: 120 SIDTAKSIIQHFE--GERA-ELVVCDGAPDVTNRHSFDEYIQSQLLLAAINIATHVICEG 176
Query: 153 GTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKY 201
GTFV K+FR +D + L+ LF +V KP ASR+AS E +++ ++
Sbjct: 177 GTFVAKIFRGRDVGLIYTQLELLFGQVTCAKPTASRNASIESFVVCQRF 225
>gi|24648639|ref|NP_650947.1| CG7009 [Drosophila melanogaster]
gi|9910868|sp|Q9VDD9.1|RMJ1B_DROME RecName: Full=Putative ribosomal RNA methyltransferase CG7009;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|7300710|gb|AAF55857.1| CG7009 [Drosophila melanogaster]
Length = 320
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 128/225 (56%), Gaps = 14/225 (6%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D +YRLAKE G+R+R+++KL+Q D F L +DLCAAPG W QV
Sbjct: 1 MGRT-SKDKRDIFYRLAKEQGWRARSAFKLLQADETFQLLEGLTRAVDLCAAPGSWSQVL 59
Query: 61 VQRV--PVGS------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAF 112
+R+ P+ ++ +DL +API G L DI+K + + ++E G
Sbjct: 60 AKRLYEPLPPEEREKVKIIAVDLQGMAPIEGVKQLRADISK---ESTAEAIIEFFGGEKA 116
Query: 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYC- 171
+V+ DG+P+ G ++ Q L++ ++ ++T L G+FV+K++R+ D +S LY
Sbjct: 117 QIVVSDGAPDSTGMHDFDSYVQGELLLSALSISTFILEEGGSFVSKIYRA-DRTSRLYTQ 175
Query: 172 LKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKY 216
LK+ F+ V V KP+ASR++S E +++ ++ P P L ++
Sbjct: 176 LKRFFKNVCVFKPSASRNSSIEAFVVAREFCLPDGYKPCNLTTEW 220
>gi|406990719|gb|EKE10349.1| Ribosomal RNA methyltransferase RrmJ/FtsJ [uncultured bacterium]
Length = 223
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 110/196 (56%), Gaps = 4/196 (2%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y + AKE GYRSRA++KL ++D KF L+ V+DL A+PGGW+QVA++RV
Sbjct: 31 RHLNDPYVQRAKEKGYRSRAAYKLQEIDDKFKILKRGTRVVDLGASPGGWLQVALERVGA 90
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+G+DL PI P+ G + D T P V K ++E D+VL D + G
Sbjct: 91 QGKVVGIDLTPIEPLPGVHFICGDFTDP----LVLKTLKEALNGRVDVVLSDMAAPSTGH 146
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ + AL ++ A L G+FV KV R +++L +K+ F KV KP A
Sbjct: 147 SQTDHIRIMALAEEAFLFAQDVLEKDGSFVIKVLRGGTETNLLNLMKKHFAKVTHFKPPA 206
Query: 187 SRSASAEIYLLGIKYK 202
SR SAEIY++ + ++
Sbjct: 207 SRRDSAEIYVVALGFR 222
>gi|195349217|ref|XP_002041143.1| GM15199 [Drosophila sechellia]
gi|194122748|gb|EDW44791.1| GM15199 [Drosophila sechellia]
Length = 302
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 134/248 (54%), Gaps = 21/248 (8%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYRLAK+ G+R+R+++KL+ +D + L +DLCAAPG W QV
Sbjct: 1 MGKTS-KDKRDIYYRLAKDEGWRARSAFKLIHVDEAYGILNGVQRAVDLCAAPGSWSQVL 59
Query: 61 VQRV---------PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRA 111
+++ ++ +DL +APIRG + L+ DITK ++ + ++ G
Sbjct: 60 SRKLYDTCETDDEKAAVKIIAVDLQAMAPIRGILQLQGDITK---QSTAEAIIGHFGGNE 116
Query: 112 -FDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLY 170
LV+ DG+P+V G + Q+ L++ ++ +AT L GTFV K+F+ S +
Sbjct: 117 KAQLVVCDGAPDVTGVHEMDEYMQHQLLVAALSIATCVLETGGTFVAKIFKGNATSLLSS 176
Query: 171 CLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLL-----DVKYLFQ--GSVE 223
++ F+K ++ KP +SR +S E +++ + P P+++ D++ L Q GS
Sbjct: 177 QMQIFFKKFDIYKPPSSRPSSIEAFVVCSGFCLPEGYIPQVINPARDDIRLLAQKSGSEV 236
Query: 224 PRKVVDVL 231
R++V +
Sbjct: 237 NRRLVPFI 244
>gi|195113347|ref|XP_002001229.1| GI10674 [Drosophila mojavensis]
gi|193917823|gb|EDW16690.1| GI10674 [Drosophila mojavensis]
Length = 305
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 121/225 (53%), Gaps = 16/225 (7%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+ ++ +F L + +DLCAAPG W QV
Sbjct: 1 MGKTS-KDKRDVYYRQAKEEGWRARSAFKLMHINDQFGVLDNVQRAVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGSL---------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGV-- 109
+++ L ++ +DL +APIRG V L+ DITK ++ K ++
Sbjct: 60 SRKLYDCCLTDDQKSEVKIVAVDLQAMAPIRGVVQLQGDITK---QSTAKAIISHFNYGD 116
Query: 110 -RAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSV 168
+ LV+ DG+P+V G + Q+ L+I ++ +AT L G FV K+F+ +
Sbjct: 117 DKKAQLVVCDGAPDVTGVHEMDEYMQSQLIISALSIATFVLESGGKFVAKIFKGNANCML 176
Query: 169 LYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLD 213
L F ++ KP +SR +S E +++ ++ P P++++
Sbjct: 177 ESRLLSFFNNFQIYKPPSSRPSSNEAFVVCCDFRLPPGYIPQVIN 221
>gi|121607215|ref|YP_995022.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Verminephrobacter
eiseniae EF01-2]
gi|143462104|sp|A1WEE7.1|RLME_VEREI RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|121551855|gb|ABM56004.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Verminephrobacter
eiseniae EF01-2]
Length = 242
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 111/206 (53%), Gaps = 5/206 (2%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y + A++ GYR+RA++KL ++D + +R + V+DL A PG W Q +R+
Sbjct: 17 QHVNDPYVQRARKEGYRARAAYKLREIDEQLGLIRPGYTVVDLGATPGAWSQYLRRRMAA 76
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
++ LD++P+ P+ G L D P+ + R+++ + R D+V+ D +PN+ G
Sbjct: 77 EGAIIALDILPMEPLEGVTCLHGDFRAPDVQQRLEQALAG---RVVDVVVSDMAPNLSGI 133
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+A LV +V + + L P G + K+F YS + KQ F +V KP A
Sbjct: 134 ACADAARMADLVELAVAFSCRHLKPDGALLVKLFHGSGYSDLAALFKQTFLRVVPLKPKA 193
Query: 187 SRSASAEIYLL--GIKYKAPAKIDPR 210
SR S+E +LL G+K +P +D R
Sbjct: 194 SRDKSSETFLLGRGLKKASPNGLDSR 219
>gi|71020429|ref|XP_760445.1| hypothetical protein UM04298.1 [Ustilago maydis 521]
gi|73621943|sp|Q4P6G5.1|SPB1_USTMA RecName: Full=AdoMet-dependent rRNA methyltransferase SPB1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|46100114|gb|EAK85347.1| hypothetical protein UM04298.1 [Ustilago maydis 521]
Length = 921
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/235 (39%), Positives = 136/235 (57%), Gaps = 33/235 (14%)
Query: 603 EVEGD-FEIVPAPGADSSDDSSSDE-----SEDEEVDTK----------AEILACAKKML 646
EVE D FE+VP D + + DE EDEE + AE +A A+ ++
Sbjct: 677 EVEDDDFEVVPQ---DQEEHAIPDEEWDLNGEDEEAGKQKRIKDHGLATAEAVALAQALV 733
Query: 647 -RKKQREQILDDAYNRYMF-DDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDA 704
R+ +E ++D ++++ F D DGLP WFL++E++H +A P+TKE I A++ + + +DA
Sbjct: 734 NRQITKEDLMDQGFSKHNFVDKDGLPTWFLDDEQKHYKANIPITKEAIQALRERQRALDA 793
Query: 705 RPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKK 764
RP KKVAEAKARKK +R+LEK +KKA I++ DIS++ K I +L +V KK
Sbjct: 794 RPIKKVAEAKARKKMRTLRRLEKAQKKAETINENEDISEKEKSNTINKLLAKSVKGAQKK 853
Query: 765 EYV--VAKKGVQVRAGKGKV--------LVDPRMKKDSRTHGSGKARKGGSKKGN 809
+ V V KGV R KG+ +VDPRMKK+ R KA++ G K G+
Sbjct: 854 KEVQLVVAKGVN-RGLKGRPKGTKGRYKMVDPRMKKELRAFKR-KAKRDGKKLGS 906
>gi|114569722|ref|YP_756402.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Maricaulis maris MCS10]
gi|122316269|sp|Q0AQH3.1|RLME_MARMM RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|114340184|gb|ABI65464.1| 23S rRNA Um-2552 2'-O-methyltransferase [Maricaulis maris MCS10]
Length = 279
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 109/193 (56%), Gaps = 6/193 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y + A+ GYRSRA++KL+QLD +F L+ V+DL +APGGW+QVA++ S V
Sbjct: 93 DPYVKKAQMEGYRSRAAYKLLQLDERFKLLKPGMRVVDLGSAPGGWVQVALKS--GASEV 150
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL+ + I GA LE+D T + + VK M A D V+ D +P G +
Sbjct: 151 VGIDLLEMEAIAGATLLEKDFTDADAPSLVKAEMGG----AADAVVSDLAPWTTGHKTTD 206
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ AL + A + L P G F+ KVF+ S +L LK FEKV KP ASRS
Sbjct: 207 HLRIVALAELAAHFAVETLKPGGFFIAKVFQGGSDSDLLNFLKANFEKVRHFKPDASRSE 266
Query: 191 SAEIYLLGIKYKA 203
SAE +++ + +K
Sbjct: 267 SAETFVVAMGFKG 279
>gi|448726837|ref|ZP_21709226.1| 23S rRNA methyltransferase J [Halococcus morrhuae DSM 1307]
gi|445793345|gb|EMA43925.1| 23S rRNA methyltransferase J [Halococcus morrhuae DSM 1307]
Length = 251
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 110/204 (53%), Gaps = 7/204 (3%)
Query: 9 RLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGS 68
R D+YY AK+ GYRSR+++KL QLD V+DL AAPGGW+QVA +R P G
Sbjct: 3 RRDEYYNKAKQQGYRSRSAYKLQQLDETADLFTDRSTVIDLGAAPGGWLQVAAERAPEGR 62
Query: 69 LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWA 128
V+G+D I I G + D+T + RA +K + E D+VL D +PN+ G +
Sbjct: 63 -VVGVDRQRIEAIDGVETRRGDLTDEDVRADLKADIGEA-----DVVLSDMAPNMSGEYD 116
Query: 129 QEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASR 188
+ L ++ +A + L P G KVF +D + +++ FE V +P ASR
Sbjct: 117 LDHARSVHLARQALDVAREVLTPGGDLAVKVFDGRDLDGLEADIEEAFEYVRTVRPDASR 176
Query: 189 SASAEIYLLG-IKYKAPAKIDPRL 211
S+E+YL+G + AP ++ L
Sbjct: 177 DESSELYLVGKGRMTAPIEVGDEL 200
>gi|399069128|ref|ZP_10749299.1| 23S rRNA methylase [Caulobacter sp. AP07]
gi|398045280|gb|EJL38019.1| 23S rRNA methylase [Caulobacter sp. AP07]
Length = 235
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 109/194 (56%), Gaps = 8/194 (4%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSL- 69
D + A+ GYRSRA++K+ ++D K F R ++DL APGGW+Q+A +R G
Sbjct: 48 DPFSAKARALGYRSRAAFKISEIDDKHHFFRKGARIIDLGCAPGGWLQIATER---GVTD 104
Query: 70 VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQ 129
++G+DL+P+ P+ A LE D T P C ++ +++ A DLV+ D +PN G
Sbjct: 105 IVGVDLLPVDPVAPAHILEMDFTDPACPPKMLELLGG----APDLVMSDMAPNTVGHRET 160
Query: 130 EAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRS 189
+ + L+ + A + L P G FV K F+ + + V+ LK+ F KV KP ASRS
Sbjct: 161 DHLRIVGLIEIGAEFAIEVLKPGGAFVAKAFQGGETAEVIAQLKKHFTKVVHFKPKASRS 220
Query: 190 ASAEIYLLGIKYKA 203
S+E++L+ +K
Sbjct: 221 DSSEVFLVATGFKG 234
>gi|21430814|gb|AAM51085.1| SD16956p [Drosophila melanogaster]
Length = 324
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 128/225 (56%), Gaps = 14/225 (6%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D +YRLAKE G+R+R+++KL+Q D F L +DLCAAPG W QV
Sbjct: 1 MGRT-SKDKRDIFYRLAKEQGWRARSAFKLLQADETFQLLEGLTRAVDLCAAPGSWSQVL 59
Query: 61 VQRV--PVGS------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAF 112
+R+ P+ ++ +DL +API G L DI+K + + ++E G
Sbjct: 60 AKRLYEPLPPEEREKVKIIAVDLQGMAPIEGVKQLRADISK---ESTAEAIIEFFGGEKA 116
Query: 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYC- 171
+V+ DG+P+ G ++ Q L++ ++ ++T L G+FV+K++R+ D +S LY
Sbjct: 117 QIVVSDGAPDSTGMHDFDSYVQGELLLSALSISTFILEEGGSFVSKIYRA-DRTSRLYTQ 175
Query: 172 LKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKY 216
LK+ F+ V V KP+ASR++S E +++ ++ P P L ++
Sbjct: 176 LKRFFKDVCVFKPSASRNSSIEAFVVAREFCLPDGYKPCNLTTEW 220
>gi|254468491|ref|ZP_05081897.1| ribosomal RNA large subunit methyltransferase J [beta
proteobacterium KB13]
gi|207087301|gb|EDZ64584.1| ribosomal RNA large subunit methyltransferase J [beta
proteobacterium KB13]
Length = 205
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 112/192 (58%), Gaps = 3/192 (1%)
Query: 8 HRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVG 67
H D++ + A++ G+RSRA++K ++++ K+ +R + ++DL +APG W Q A +
Sbjct: 14 HLSDEFVKRAQKDGFRSRAAYKFIEMNDKYHLIRPNDRIVDLGSAPGSWSQAASSLISNN 73
Query: 68 SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAW 127
+ +DL+P+ ++ ++ D + ++++++E V DLV+ D +PN+ G
Sbjct: 74 GKIFAIDLLPMDDVKNTTFIQGDFRELSILQKLEELLENTAV---DLVISDMAPNISGIK 130
Query: 128 AQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAAS 187
+++ N L S+K A+ +L PKG F+ K F + + L+ LF KV+++KP +S
Sbjct: 131 SRDQAMINDLNDLSLKFASDWLKPKGHFMVKTFMGSGFEEYVKKLRSLFNKVKIEKPDSS 190
Query: 188 RSASAEIYLLGI 199
R SAE +L+G+
Sbjct: 191 RDRSAEFFLIGL 202
>gi|407938541|ref|YP_006854182.1| 23S rRNA methyltransferase J [Acidovorax sp. KKS102]
gi|407896335|gb|AFU45544.1| 23S rRNA methyltransferase J [Acidovorax sp. KKS102]
Length = 218
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 113/203 (55%), Gaps = 11/203 (5%)
Query: 8 HRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV-PV 66
H D Y +LA++ GYR+RA++KL ++D + ++ + V+DL + PG W Q +R+ P
Sbjct: 18 HVNDTYVKLAQKEGYRARAAYKLKEIDEQLGLIKPGYTVVDLGSTPGAWSQYLRRRLSPS 77
Query: 67 GSL-------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDG 119
G+ ++ LD++P+ PI G L D +PE R+++ ++ R D+V+ D
Sbjct: 78 GAAAGQLNGAIIALDILPMEPIEGVTYLNGDFREPEVLERLEQALDG---RVVDVVVSDM 134
Query: 120 SPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKV 179
+PN+ G + +A LV +V A L P+G V K+F YS ++ KQ F+ V
Sbjct: 135 APNLSGIESADAARIAHLVELAVDFACNHLKPEGALVVKLFHGSGYSDLVTLFKQTFKVV 194
Query: 180 EVDKPAASRSASAEIYLLGIKYK 202
+ KP ASR S+E +L+G+ K
Sbjct: 195 KPLKPKASRDKSSETFLVGMGLK 217
>gi|224035899|gb|ACN37025.1| unknown [Zea mays]
gi|413939352|gb|AFW73903.1| hypothetical protein ZEAMMB73_056426 [Zea mays]
Length = 202
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 111/189 (58%), Gaps = 21/189 (11%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+Q+D +F+ V+DLCAAPG W QV
Sbjct: 1 MGKAS-KDKRDIYYRKAKEEGWRARSAFKLLQIDQEFNIFHGVKHVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGS------------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEH- 107
+ + V + L++ +DL P+API G + ++ DIT AR V+ H
Sbjct: 60 SRNLYVPAKQSSDCKEGDLPLIVAIDLQPMAPIEGVIQVQGDITN----ARTADVVIRHF 115
Query: 108 -GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYS 166
G +A DLV+ DG+P+V G + Q+ L++ ++ + T L G FV K+FR +D +
Sbjct: 116 DGCKA-DLVVCDGAPDVTGLHDMDEFVQSQLILAALAIVTHVLKVGGKFVAKIFRGKD-T 173
Query: 167 SVLYCLKQL 175
S+LYC ++L
Sbjct: 174 SLLYCQRRL 182
>gi|329893942|ref|ZP_08269977.1| Ribosomal RNA large subunit methyltransferase J [gamma
proteobacterium IMCC3088]
gi|328923397|gb|EGG30714.1| Ribosomal RNA large subunit methyltransferase J [gamma
proteobacterium IMCC3088]
Length = 208
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 111/197 (56%), Gaps = 3/197 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+HR D Y + A++ GYRSRA +KL++L+ K LR V+DL +APGGW QVA V V
Sbjct: 14 EHRDDVYVQRAQKEGYRSRACYKLIELNEKDRLLRPGMTVVDLGSAPGGWSQVAAGIVGV 73
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ D++P+ + ++ D T+ A ++E G DLV+ D +PN+ G
Sbjct: 74 KGRVIATDILPMDTLEDVDFIQGDFTE---EAVFDALLEAIGDEPVDLVMSDMAPNMSGM 130
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
A + LV +V +A++ LAPKG FV KVF+ + + + L++ ++ V KP A
Sbjct: 131 TAVDQPRAMYLVELAVDMASRVLAPKGAFVAKVFQGEGFDELFRSLREQYQTVLTRKPDA 190
Query: 187 SRSASAEIYLLGIKYKA 203
SR S E+Y++ +K
Sbjct: 191 SRPRSREVYIVAKGFKG 207
>gi|381160479|ref|ZP_09869711.1| 23S rRNA methylase [Thiorhodovibrio sp. 970]
gi|380878543|gb|EIC20635.1| 23S rRNA methylase [Thiorhodovibrio sp. 970]
Length = 215
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 109/200 (54%), Gaps = 3/200 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+ R D Y + A+ GYRSRA++K +++D+K LR VLDL AAPGGW QV V
Sbjct: 14 RQRRDPYVKQAQSEGYRSRAAYKFLEIDAKDRLLRPGMRVLDLGAAPGGWSQVLAAGVGS 73
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ LDL+P+ P+ G V ++ D T+ E R+ + V DLVL D +PN+ G
Sbjct: 74 RGQVIALDLLPMDPVPGVVFIQGDFTEDEPLERIHAALNGEFV---DLVLSDMAPNISGM 130
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
A + L ++ LAT+ L G V K F + + ++ L++ FE+V KP A
Sbjct: 131 RAVDQPRSVHLCELALDLATRVLQSGGHLVIKAFHGEGFDQLVRELRRCFERVVTRKPDA 190
Query: 187 SRSASAEIYLLGIKYKAPAK 206
SR+ S E YL+ +++ +
Sbjct: 191 SRANSRETYLVATGFRSACR 210
>gi|350563180|ref|ZP_08932002.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Thioalkalimicrobium
aerophilum AL3]
gi|349779044|gb|EGZ33391.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Thioalkalimicrobium
aerophilum AL3]
Length = 205
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 107/194 (55%), Gaps = 3/194 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y A++ G+RSRA +KL +++ K L+ VLDL AAPGGW Q A Q V
Sbjct: 13 EHFDDPYVLQAQKEGWRSRAIYKLKEINEKDQLLKPGMLVLDLGAAPGGWSQYAAQNVSP 72
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
VL LD++P+ P G L+ D T ++ + E R DLV+ D +PN G
Sbjct: 73 AGKVLALDILPVEPYAGVSFLQGDFTDETIFEQLLASINE---RPVDLVMSDMAPNFSGN 129
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
A + LV ++ LA + L P G + KVF+ + Y +L ++Q + KV KP A
Sbjct: 130 KAIDIPRAMYLVELTLDLAERVLKPGGNVLMKVFQGEGYEQLLAQMRQDYAKVITRKPQA 189
Query: 187 SRSASAEIYLLGIK 200
SR+ S+EIYLLG+K
Sbjct: 190 SRARSSEIYLLGLK 203
>gi|448456751|ref|ZP_21595407.1| 23S rRNA methyltransferase J [Halorubrum lipolyticum DSM 21995]
gi|445811348|gb|EMA61355.1| 23S rRNA methyltransferase J [Halorubrum lipolyticum DSM 21995]
Length = 265
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 105/189 (55%), Gaps = 5/189 (2%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D YY +K+ GYRSRAS+KL QLD + V+DL AAPGGW+QVA + V V
Sbjct: 5 DDYYNRSKQQGYRSRASYKLKQLDEEADLFERGDTVVDLGAAPGGWLQVAAEEVGESGTV 64
Query: 71 LGLDLVPIAPI--RGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWA 128
+G+DL I + +L D+T+ R +++ + E G D+V+ D +PN+ G +A
Sbjct: 65 IGVDLQRIDDLEEHDVQTLRGDMTEERTRHYLREAVGERGA---DVVISDMAPNMTGEYA 121
Query: 129 QEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASR 188
+ L + +A + LAP G FV KVF+ +D + ++ FE + P ASR
Sbjct: 122 LDHARSVHLARQAFDVAEELLAPGGDFVVKVFQGEDLDAFREDVRAEFEYLRTVSPPASR 181
Query: 189 SASAEIYLL 197
+S+E+YL+
Sbjct: 182 DSSSEVYLV 190
>gi|409399806|ref|ZP_11250034.1| ribosomal RNA large subunit methyltransferase J [Acidocella sp.
MX-AZ02]
gi|409131089|gb|EKN00811.1| ribosomal RNA large subunit methyltransferase J [Acidocella sp.
MX-AZ02]
Length = 224
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 111/192 (57%), Gaps = 6/192 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y AK G+RSRA++KL++LD K+ + VLDL AAPGGW QVA++R + V
Sbjct: 37 DPYVTAAKAAGWRSRAAFKLIELDEKYKLIGKGSRVLDLGAAPGGWSQVALER--GAAKV 94
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL+ I P+ GA ++ D + AR+ +++ G +A DLVL D +PN G A +
Sbjct: 95 VGIDLLEIQPVAGADFIQGDFLEEGIEARLTELL---GGKA-DLVLSDMAPNTSGHVATD 150
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ AL ++ A + LAP G FV K+F+ +L LK F V+ KP ASR
Sbjct: 151 HIRIMALAETALAFACEILAPDGAFVAKLFQGGAEKDMLNTLKARFRSVKHAKPPASRKD 210
Query: 191 SAEIYLLGIKYK 202
S E+Y++ ++
Sbjct: 211 SKEMYVVATGFR 222
>gi|328771243|gb|EGF81283.1| hypothetical protein BATDEDRAFT_10491 [Batrachochytrium
dendrobatidis JAM81]
Length = 283
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 123/231 (53%), Gaps = 20/231 (8%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYRLAKE G+R+R+++KL+Q+D +++ V+DLCAAPG W QV
Sbjct: 1 MGK-SSKDKRDIYYRLAKEQGWRARSAFKLLQIDEEYNIFEDVKNVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVG-----SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV 115
+R+ S ++ +DL +AP+ G + ++ DITK ++ + + DLV
Sbjct: 60 SRRLASTDSTKQSKIVAVDLQAMAPLPGVIQIQGDITK---KSTAELITSHFDGEKADLV 116
Query: 116 LHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL 175
+ DG+P+V G + Q L++ + + + L GTF+ K+FR +D S + ++
Sbjct: 117 ICDGAPDVTGLHDMDEYIQAQLLLAAFNITSHVLRNGGTFIAKIFRGKDISLLFAQMRLF 176
Query: 176 FEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPR----LLDVKYLFQGSV 222
F V+V KP S +++ Y PA P LLD+ Y F+ +
Sbjct: 177 FPLVDVAKPRKS-------FIVCRNYSPPAGYVPTMANPLLDLDYNFENEL 220
>gi|167646174|ref|YP_001683837.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Caulobacter sp. K31]
gi|167348604|gb|ABZ71339.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Caulobacter sp. K31]
Length = 235
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 110/194 (56%), Gaps = 8/194 (4%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSL- 69
D + A+ GYRSRA++K+ ++D K+ F + V+DL APGGW+Q+A +R G
Sbjct: 48 DPFSAKARALGYRSRAAFKISEIDDKYRFFKKGAKVIDLGCAPGGWLQMATER---GVTD 104
Query: 70 VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQ 129
++G+DL+P+ P+ A LE D T P C K++E G A DLV+ D +PN G
Sbjct: 105 IVGVDLLPVDPVAPAHILEMDFTDPACP---PKMLELLG-GAPDLVMSDMAPNTVGHRET 160
Query: 130 EAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRS 189
+ + L+ A + L P G FV K F+ + ++V+ LK+ F KV KP ASRS
Sbjct: 161 DHLRIVGLIEIGADFAIEVLKPGGAFVAKAFQGGETAAVIAQLKKHFTKVVHFKPKASRS 220
Query: 190 ASAEIYLLGIKYKA 203
S+E++L+ +K
Sbjct: 221 DSSEVFLVATGFKG 234
>gi|13384672|ref|NP_079586.1| pre-rRNA processing protein FTSJ3 [Mus musculus]
gi|73621844|sp|Q9DBE9.1|RRMJ3_MOUSE RecName: Full=pre-rRNA processing protein FTSJ3; AltName:
Full=Protein ftsJ homolog 3; AltName: Full=Putative rRNA
methyltransferase 3; AltName: Full=rRNA
(uridine-2'-O-)-methyltransferase 3
gi|12836606|dbj|BAB23730.1| unnamed protein product [Mus musculus]
gi|74211447|dbj|BAE26467.1| unnamed protein product [Mus musculus]
gi|148702334|gb|EDL34281.1| FtsJ homolog 3 (E. coli) [Mus musculus]
Length = 838
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 108/156 (69%), Gaps = 10/156 (6%)
Query: 648 KKQREQILDDAYNRYMFDDDG--LPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDAR 705
KK + ++D+++NRY F+++ LP+WF +EE++HR PV K+E+ + +++EI+AR
Sbjct: 669 KKAKRDLIDNSFNRYAFNEEEGELPEWFAQEEKQHRIRQLPVDKKEVEHYRKRWREINAR 728
Query: 706 PAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKE 765
P KKVAEAKARKKR ++KLE+ +KKA + + DIS+R K Q+ LYK A + K++
Sbjct: 729 PIKKVAEAKARKKRRVLKKLEQTKKKAEAVVNTVDISEREKVAQLRSLYKKAGLGKEKRQ 788
Query: 766 --YVVAKKGV--QVR--AG-KGKV-LVDPRMKKDSR 793
YVVAKKGV +VR AG KG +VD RMKKD R
Sbjct: 789 VTYVVAKKGVGRKVRRPAGVKGHFKVVDSRMKKDQR 824
>gi|312076873|ref|XP_003141055.1| hypothetical protein LOAG_05470 [Loa loa]
Length = 335
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 119/219 (54%), Gaps = 28/219 (12%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYRLAKE G+R+R + H V+DLCAAPG W QV
Sbjct: 1 MGKT-SKDKRDIYYRLAKEEGWRAR----------------NVHRVVDLCAAPGSWSQVL 43
Query: 61 VQRVPVGS--------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAF 112
++V ++ +DL P++P+ G + L+ DIT+ ++ E G++A
Sbjct: 44 SKKVYFAEDEGRRKDIRIVAVDLQPMSPLPGVIQLQGDITETSTAEKIISYFE--GLKA- 100
Query: 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCL 172
DLV+ DG+P+V G A + Q+ LV+ ++ +AT L GTFV KVFR++D + + L
Sbjct: 101 DLVVCDGAPDVTGLHALDEYMQSQLVLAALNIATFVLKETGTFVAKVFRARDITLLYAQL 160
Query: 173 KQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
K F++V KP +SR +S E +++ ++ P P +
Sbjct: 161 KIFFKEVYCAKPRSSRQSSCEAFVVCKEFNLPKGYTPTM 199
>gi|241763937|ref|ZP_04761979.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Acidovorax delafieldii
2AN]
gi|241366760|gb|EER61201.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Acidovorax delafieldii
2AN]
Length = 220
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 112/203 (55%), Gaps = 11/203 (5%)
Query: 8 HRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV-PV 66
H D Y +LA++ GYR+RA++KL ++D + ++ V+DL + PG W Q +R+ P
Sbjct: 18 HVNDTYVKLAQKEGYRARAAYKLKEIDEQLGLIKPGFTVVDLGSTPGAWSQYVRRRLSPA 77
Query: 67 GSL-------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDG 119
G+ ++ LD++P+ P+ G L D +PE AR+++ ++ R D+V+ D
Sbjct: 78 GAAAGQLNGAIIALDILPMEPVEGVTFLHGDFREPEVLARLEEALQG---RTVDVVVSDM 134
Query: 120 SPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKV 179
+PN+ G + +A LV +V A L P+G V K+F Y ++ K+ F+ V
Sbjct: 135 APNLSGIESADAARIAHLVELAVDFACHHLKPEGALVVKLFHGSGYGELVALFKRTFKTV 194
Query: 180 EVDKPAASRSASAEIYLLGIKYK 202
+ KP ASR S+E +L+GI K
Sbjct: 195 KPLKPKASRDKSSETFLVGIGLK 217
>gi|170591144|ref|XP_001900330.1| protein R74.7 [Brugia malayi]
gi|158591942|gb|EDP30544.1| protein R74.7, putative [Brugia malayi]
Length = 207
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 116/193 (60%), Gaps = 15/193 (7%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYRLAKE G+R+R+++KL+Q+D +F+ H V+DLCAAPG W QV
Sbjct: 1 MGKT-SKDKRDIYYRLAKEEGWRARSAFKLMQIDDEFNIFEGVHRVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGS--------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAF 112
++V ++ +DL P++P+ G + L+ DIT+ C A+ K + G +A
Sbjct: 60 SKKVYFAQDEKERKAVRIVAVDLQPMSPLPGIIQLQGDITE-ACTAK-KIISYLEGSKA- 116
Query: 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCL 172
DLV+ DG+P+V G A + Q+ LV+ + +AT L GTFV K FR++D ++LY
Sbjct: 117 DLVICDGAPDVTGLHALDEYMQSQLVLAPLNIATFVLKEAGTFVAK-FRTRDI-TLLYAQ 174
Query: 173 KQLFEK-VEVDKP 184
++F K V KP
Sbjct: 175 LKIFSKEVYCTKP 187
>gi|409722538|ref|ZP_11269984.1| 23S rRNA methyltransferase J [Halococcus hamelinensis 100A6]
gi|448722128|ref|ZP_21704667.1| 23S rRNA methyltransferase J [Halococcus hamelinensis 100A6]
gi|445790119|gb|EMA40789.1| 23S rRNA methyltransferase J [Halococcus hamelinensis 100A6]
Length = 251
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 111/199 (55%), Gaps = 7/199 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D+YY AK+ GYRSR+++KL QLD V+DL AAPGGW+QVA +RV G V
Sbjct: 5 DEYYNKAKQQGYRSRSAYKLQQLDETADLFDDGDTVIDLGAAPGGWLQVAAERVGTGR-V 63
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+D I + G ++ D+T + +A + + + E D+VL D +PN+ G + +
Sbjct: 64 VGVDRQRIDSLDGVETVRGDLTDEDVQAYLAERVGEA-----DVVLSDMAPNMTGEYDLD 118
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
L + +A LAP G FV KVF +D ++ + FE V+ +P ASR
Sbjct: 119 HARSVYLARQAFDVALDVLAPGGDFVAKVFDGRDLDALEADIDTEFEYVQTVRPDASRDE 178
Query: 191 SAEIYLLGIKYKAPAKIDP 209
S+E+YL+G K + A ++P
Sbjct: 179 SSELYLVG-KGRMTAPVEP 196
>gi|387130166|ref|YP_006293056.1| Cell division protein FtsJ / Ribosomal RNA large subunit
methyltransferase J [Methylophaga sp. JAM7]
gi|386271455|gb|AFJ02369.1| Cell division protein FtsJ / Ribosomal RNA large subunit
methyltransferase J [Methylophaga sp. JAM7]
Length = 205
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 110/192 (57%), Gaps = 3/192 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y + A + GYRSRA++KL +++ K LR V+DL AAPGGW A+ +V
Sbjct: 13 EHFDDVYVKKAHQKGYRSRATFKLDEINQKDKLLRPGMVVVDLGAAPGGWSDYALHQVGE 72
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ LD++P+ P+ G +E D + +++V+ + + DLVL D +PN+ G
Sbjct: 73 SGTVVALDILPMTPLTGVHFIEGDFREQTVLDALEEVVADQSI---DLVLSDMAPNLSGV 129
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
A + LV ++ A Q L+ G F+ KVF+ + + + L +++ F+KV KP A
Sbjct: 130 DAIDQAGSMYLVELALDFAQQHLSKNGDFLVKVFQGEGFEAYLKAMRETFKKVVSRKPDA 189
Query: 187 SRSASAEIYLLG 198
SR+ S EIYLLG
Sbjct: 190 SRARSREIYLLG 201
>gi|296283049|ref|ZP_06861047.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Citromicrobium
bathyomarinum JL354]
Length = 226
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 104/193 (53%), Gaps = 5/193 (2%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y R AK GYRSRA++KL++LD KF LR + ++DL APGGW Q+A ++ P ++V
Sbjct: 32 DPYVREAKAAGYRSRAAFKLIELDEKFGILRGAERIVDLGIAPGGWSQIAQKKRPQATIV 91
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
G+DL+P P+ G LE D E + + H DLV+ D + N G +
Sbjct: 92 -GIDLLPTEPLDGVTILEMDFMADEA----PETIMGHLGGPPDLVMSDMAANTVGHKQTD 146
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ LV + A Q LAP G F+ KV + +L LK+ F+ V+ KP ASR
Sbjct: 147 HLRTMGLVETAADFAIQTLAPGGQFLAKVLAGGTDAQLLALLKKNFKTVKHAKPPASRKG 206
Query: 191 SAEIYLLGIKYKA 203
S+E Y++ +K
Sbjct: 207 SSEWYVVAQGFKG 219
>gi|219110463|ref|XP_002176983.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411518|gb|EEC51446.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 315
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 126/242 (52%), Gaps = 44/242 (18%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSF----------------LRSSH 44
MG++ R D +YRLAKE GYR+R+++KL+Q+D++F LR
Sbjct: 1 MGRLSRDKR-DVFYRLAKEKGYRARSAFKLLQVDAEFDIFGARGAPASLGNTIEPLRVQR 59
Query: 45 AVLDLCAAPGGWMQVAVQRV-----------------------PVGSLVLGLDLVPIAPI 81
AV DLCAAPG W QV ++ P ++ +DL P+API
Sbjct: 60 AV-DLCAAPGSWSQVLSDKLYELNHATGDAGANSDQALDIDEQPEEPSIVAVDLQPMAPI 118
Query: 82 RGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDS 141
G + L+ DIT + K + G RA +LV+ DG+P+V G + Q L++ +
Sbjct: 119 DGVLCLQGDITAQSTAQDIIKHFQ--GNRA-ELVVCDGAPDVTGLHDVDEYLQGQLLLSA 175
Query: 142 VKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKY 201
+ + T L +GTFV K+FR ++ + L+ LFE+V + KP +SR++S E +++ ++
Sbjct: 176 MMITTHVLCERGTFVAKIFRGRNVGFLYAQLRLLFERVSIAKPTSSRNSSMESFVVCQRF 235
Query: 202 KA 203
K
Sbjct: 236 KG 237
>gi|254281755|ref|ZP_04956723.1| ribosomal RNA large subunit methyltransferase J [gamma
proteobacterium NOR51-B]
gi|219677958|gb|EED34307.1| ribosomal RNA large subunit methyltransferase J [gamma
proteobacterium NOR51-B]
Length = 206
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 106/191 (55%), Gaps = 3/191 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+HR D Y + A++ GYRSRA +KL++L+ + +R VLDL AAPGGW QVA V
Sbjct: 14 EHREDPYVQRAQKEGYRSRACYKLLELNERDRLIRPGMTVLDLGAAPGGWSQVAANLVGA 73
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ D++P+ + G L+ D T+ A +K++ E + LV+ D +PN+ G
Sbjct: 74 KGRVVASDILPMDSLAGVTFLQGDFTE---EAIYQKLLAEFELAPPQLVMSDMAPNLSGM 130
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
A + ALV ++ LA L P G FV KVF + + +L + F++V KP A
Sbjct: 131 TAVDQPRAMALVELALDLAVTLLPPGGAFVAKVFHGEGFEPLLKACRGQFDRVLTRKPTA 190
Query: 187 SRSASAEIYLL 197
SR S E+YL+
Sbjct: 191 SRPRSREVYLV 201
>gi|195570241|ref|XP_002103117.1| GD19132 [Drosophila simulans]
gi|194199044|gb|EDX12620.1| GD19132 [Drosophila simulans]
Length = 302
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 134/248 (54%), Gaps = 21/248 (8%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYRLAK+ G+R+R+++KL+ +D + L +DLCAAPG W QV
Sbjct: 1 MGKTS-KDKRDIYYRLAKDEGWRARSAFKLLHVDEAYGILNGVQRAVDLCAAPGSWSQVL 59
Query: 61 VQRV---------PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRA 111
+++ ++ +DL +APIRG + L+ DITK ++ + ++ G
Sbjct: 60 SRKLYDTCETDDEKAAVKIIAVDLQAMAPIRGILQLQGDITK---QSTAEAIIGHFGGNE 116
Query: 112 -FDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLY 170
LV+ DG+P+V G + Q+ L++ ++ +AT L GTFV K+F+ S +
Sbjct: 117 KAQLVVCDGAPDVTGVHEMDEYMQHQLLVAALSIATCVLETGGTFVAKIFKGNATSLLSS 176
Query: 171 CLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLL-----DVKYLFQ--GSVE 223
++ F+K ++ KP +SR +S E +++ + P P+++ D++ L Q GS
Sbjct: 177 QMQIFFKKFDIYKPPSSRPSSIEAFVVCSGFCLPEGYIPQVINPARDDIRLLAQKSGSEV 236
Query: 224 PRKVVDVL 231
R++V +
Sbjct: 237 NRRLVPFI 244
>gi|110772930|ref|XP_001123010.1| PREDICTED: ribosomal RNA large subunit methyltransferase E-like,
partial [Apis mellifera]
Length = 225
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 108/193 (55%), Gaps = 6/193 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y + A++HG+RSRA++KL++L+ KF FL+ V+DL AAPGGW QVAV S V
Sbjct: 32 DPYVKAAQQHGWRSRAAYKLIELNDKFHFLKKGIKVVDLGAAPGGWSQVAVYH--KASKV 89
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL+ + P+ GA + D T+P + +E DLV+ D +PN G A +
Sbjct: 90 VGIDLLQVEPVMGADIFQGDFTEPHNLEVLLDKLEGKA----DLVMSDMAPNTTGHAATD 145
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ L ++ A + L G F+ KVF+ +L LK+ F+ V+ KP ASR
Sbjct: 146 HIRIVNLTEQALDFAIKILNLNGVFIAKVFQGGSEKLMLNNLKRSFKIVKHAKPPASRKE 205
Query: 191 SAEIYLLGIKYKA 203
S E+Y++ +K
Sbjct: 206 SRELYVIATGFKG 218
>gi|448730693|ref|ZP_21712998.1| 23S rRNA methyltransferase J [Halococcus saccharolyticus DSM 5350]
gi|445793134|gb|EMA43724.1| 23S rRNA methyltransferase J [Halococcus saccharolyticus DSM 5350]
Length = 251
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 106/188 (56%), Gaps = 6/188 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D+YY AK+ GYRSR+++KL QLD + S V+DL AAPGGW+QVA +R G V
Sbjct: 5 DEYYNKAKQQGYRSRSAYKLQQLDDTADLIASGDTVIDLGAAPGGWLQVAAERTDDGR-V 63
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+D I I G ++ D+T+ + +A + + + E DLVL D +PN+ G + +
Sbjct: 64 VGVDRQRIESIDGVETVRGDLTEDDTQAELAERVGEA-----DLVLSDMAPNMTGEYDLD 118
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
L ++ +A LAP G V KVF +D + ++ FE V +P ASR
Sbjct: 119 HARSVHLARQALDVARTVLAPGGDLVVKVFDGRDLDDLEADIEDEFEYVRTVRPEASRDE 178
Query: 191 SAEIYLLG 198
S+E+YL+G
Sbjct: 179 SSELYLVG 186
>gi|393720036|ref|ZP_10339963.1| 23S rRNA methyltransferase J [Sphingomonas echinoides ATCC 14820]
Length = 230
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 110/197 (55%), Gaps = 5/197 (2%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y + AK G+RSRA++KL +LD +F+FL+ V+DL APGGW QV + VP ++V
Sbjct: 32 DPYVKRAKADGFRSRAAYKLSELDERFAFLKGKRRVVDLGIAPGGWSQVVRRLVPKAAIV 91
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
G+DL+P+ PI G + D R+ ++ A DLVL D + N G +
Sbjct: 92 -GIDLLPVDPIEGVTIFQLDFMADVAPERLMAALDG----APDLVLSDMAANTVGHPQTD 146
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
A+ LV ++ A L P G FV KVF ++++ +K+ F V+ KPAASR A
Sbjct: 147 ALRTMGLVEAALAFAIDVLEPGGAFVGKVFAGGADTALVAEMKRNFASVKHAKPAASRKA 206
Query: 191 SAEIYLLGIKYKAPAKI 207
S+E Y++ +K AK+
Sbjct: 207 SSEWYVVAQGFKGRAKV 223
>gi|393218409|gb|EJD03897.1| FtsJ-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 870
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/217 (39%), Positives = 134/217 (61%), Gaps = 23/217 (10%)
Query: 599 NQVSEVEGDFEIVPAPGADSS----DDSSSDESEDEEVDT------KAEILACAKKML-R 647
N+VS+ E DFE+VP G D D + + ++E +E AE + A++++ R
Sbjct: 642 NEVSDSENDFEVVPK-GNDEDIEMWDANGASDNEGKEAKALKNGLMTAEAVTLAQQLVNR 700
Query: 648 KKQREQILDDAYNRYMFDD-DGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARP 706
+K + Q+++D +NRY + +GLP WFL++E +H + PVTKE I ++A+ + +DARP
Sbjct: 701 EKTKTQLINDGFNRYSLNSKEGLPPWFLDDEAKHYKPNIPVTKEAIDILRARQRALDARP 760
Query: 707 AKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKK-- 764
KKVAEAKARKK A++KL+K KKA +++ D+S+R K +QI++L + K +K
Sbjct: 761 IKKVAEAKARKKHKALQKLQKAMKKAEGVNESTDMSEREKAQQIQKLMLKGLAKAKQKKS 820
Query: 765 --EYVVAK---KGVQVR--AGKGKV-LVDPRMKKDSR 793
+ VVAK +G+Q R KG+ +VD R KK+ R
Sbjct: 821 EVKVVVAKGPHRGIQGRPKGVKGRYRMVDSRGKKELR 857
>gi|254420188|ref|ZP_05033912.1| ribosomal RNA large subunit methyltransferase J [Brevundimonas sp.
BAL3]
gi|196186365|gb|EDX81341.1| ribosomal RNA large subunit methyltransferase J [Brevundimonas sp.
BAL3]
Length = 224
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 111/189 (58%), Gaps = 6/189 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
DK+ A+ G+RSRA++KL+++D KF ++ V+DL AAPGGW+QVAV R V
Sbjct: 39 DKWSEKARAEGWRSRAAFKLIEIDDKFHLIKRGSKVIDLGAAPGGWIQVAVNR--GAGAV 96
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
G+DL+ I PI G+ L+ D T P +++++ G A DLVL D + N G +
Sbjct: 97 AGVDLLMIEPIPGSTLLQADFTHPGVD---QQLIDAIG-GAPDLVLSDMAHNTVGHRQTD 152
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ AL+ + A + L P G FV+K F+ D VL L++ FE V+ KPA+SR
Sbjct: 153 HLKIIALIEIAADFAIRTLRPGGNFVSKNFQGGDAGGVLARLREEFETVKYVKPASSRKD 212
Query: 191 SAEIYLLGI 199
SAE++L+ +
Sbjct: 213 SAEVFLVAL 221
>gi|262094407|gb|ACY09333.1| cell division protein [Heliconius melpomene melpomene]
Length = 253
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 123/222 (55%), Gaps = 17/222 (7%)
Query: 14 YRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSL---- 69
YRLAKE G+R+R+++KL+Q++ +++ +DLCAAPG W QV +++ +
Sbjct: 1 YRLAKEEGWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQVLTKKLRQNTSNTDD 60
Query: 70 --VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAW 127
++ +DL +A + G ++ DITK + K E G++A DLV+ DG+P+V G
Sbjct: 61 VKIVAVDLQAMAALPGVKQIQGDITKISTXHEIIK--EFEGLKA-DLVVCDGAPDVTGLH 117
Query: 128 AQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAAS 187
+ Q+ L++ ++ + T L G FV K+FR +D + + LK F+ V V KP +S
Sbjct: 118 DIDEYVQSQLLLAALNITTHVLKEGGVFVAKIFRGKDXTLLYSQLKLFFDYVTVSKPRSS 177
Query: 188 RSASAEIYLLGIKYKAPAKIDPR----LLDVKYL----FQGS 221
R++S E +++ Y AP P LLD KY F GS
Sbjct: 178 RNSSIEAFVICQNYXAPPGYVPTMVNPLLDHKYCNFNQFTGS 219
>gi|347526771|ref|YP_004833518.1| ribosomal RNA large subunit methyltransferase E [Sphingobium sp.
SYK-6]
gi|345135452|dbj|BAK65061.1| ribosomal RNA large subunit methyltransferase E [Sphingobium sp.
SYK-6]
Length = 234
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 105/193 (54%), Gaps = 5/193 (2%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y + AK GYRSRA++KL++LD KF L+ V+DL APGGW QV ++VP ++V
Sbjct: 32 DPYVKRAKAEGYRSRAAYKLIELDEKFGLLKGVRHVVDLGVAPGGWAQVVRKKVPQAAIV 91
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
G+DL+P+ PI G L+ D E R ++ E G A DLV+ D + N G +
Sbjct: 92 -GIDLLPVEPIAGVTLLQMDFMADEAPGR---LIAELG-SAPDLVMSDMAANTVGHQQTD 146
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ LV + A + L P G FV+KVF ++L LK F V+ KP +SR
Sbjct: 147 HLRTMGLVEAAADFAMRTLKPGGAFVSKVFAGGTDDALLRQLKAAFRTVKHAKPPSSRKG 206
Query: 191 SAEIYLLGIKYKA 203
S E +++ +K
Sbjct: 207 SVEWFVVAQGFKG 219
>gi|365096706|ref|ZP_09331149.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Acidovorax sp. NO-1]
gi|363413732|gb|EHL20924.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Acidovorax sp. NO-1]
Length = 220
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 113/206 (54%), Gaps = 11/206 (5%)
Query: 8 HRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV-PV 66
H D Y +LA++ GYR+RA++KL ++D + ++ + V+DL + PG W Q +R+ P
Sbjct: 18 HVNDTYVKLAQKEGYRARAAYKLKEIDEQLGLIKPGYTVVDLGSTPGAWSQYLRRRMSPA 77
Query: 67 GS-------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDG 119
G+ +++ LD++P+ PI G + D +PE +++ +E R D+V+ D
Sbjct: 78 GAASGQLNGVIIALDILPMEPIEGVTYINGDFREPEVLEHLEQALEG---RVVDVVVSDM 134
Query: 120 SPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKV 179
+PN+ G + +A LV +V A L P G V K+F YS ++ KQ F+ V
Sbjct: 135 APNLSGIESADAARIAHLVELAVDFACNHLKPDGALVVKLFHGSGYSDLVTLFKQTFKVV 194
Query: 180 EVDKPAASRSASAEIYLLGIKYKAPA 205
+ KP ASR S+E +L+G+ + A
Sbjct: 195 KPLKPKASRDKSSETFLVGMGLRKTA 220
>gi|359785311|ref|ZP_09288464.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Halomonas sp. GFAJ-1]
gi|359297426|gb|EHK61661.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Halomonas sp. GFAJ-1]
Length = 215
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 113/199 (56%), Gaps = 3/199 (1%)
Query: 5 KGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV 64
K +H D+Y + + + GYRSRAS+KL+++D K R+ V+DL AAPGGW Q+A ++V
Sbjct: 20 KKEHFDDQYVKQSWQDGYRSRASYKLLEMDEKDKLFRAGMTVIDLGAAPGGWSQIAAEKV 79
Query: 65 PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVG 124
+V+ D++ + + G ++ D T+ + ++E G R DLV+ D +PN+
Sbjct: 80 GPEGVVIASDILEMDALAGVDFIQGDFTEERV---LNAILERLGNRPVDLVMSDMAPNMS 136
Query: 125 GAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKP 184
G A + LV +++LA + L P G F+ KVF+ + + + L L+ F +V KP
Sbjct: 137 GMAAIDQPQAMYLVELALELARETLPPGGRFLAKVFQGEGFDAYLKALRGSFNRVVTRKP 196
Query: 185 AASRSASAEIYLLGIKYKA 203
ASR+ S E+Y L ++
Sbjct: 197 DASRARSREVYFLAEGFRG 215
>gi|189040697|sp|B0T8J6.2|RLME_CAUSK RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
Length = 226
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 110/194 (56%), Gaps = 8/194 (4%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSL- 69
D + A+ GYRSRA++K+ ++D K+ F + V+DL APGGW+Q+A +R G
Sbjct: 39 DPFSAKARALGYRSRAAFKISEIDDKYRFFKKGAKVIDLGCAPGGWLQMATER---GVTD 95
Query: 70 VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQ 129
++G+DL+P+ P+ A LE D T P C K++E G A DLV+ D +PN G
Sbjct: 96 IVGVDLLPVDPVAPAHILEMDFTDPACP---PKMLELLG-GAPDLVMSDMAPNTVGHRET 151
Query: 130 EAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRS 189
+ + L+ A + L P G FV K F+ + ++V+ LK+ F KV KP ASRS
Sbjct: 152 DHLRIVGLIEIGADFAIEVLKPGGAFVAKAFQGGETAAVIAQLKKHFTKVVHFKPKASRS 211
Query: 190 ASAEIYLLGIKYKA 203
S+E++L+ +K
Sbjct: 212 DSSEVFLVATGFKG 225
>gi|290974158|ref|XP_002669813.1| predicted protein [Naegleria gruberi]
gi|284083365|gb|EFC37069.1| predicted protein [Naegleria gruberi]
Length = 303
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 125/219 (57%), Gaps = 6/219 (2%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ + + D +YR AK+ G+R+R+++KL+Q+D +F+ + +DLCAAPG W QV
Sbjct: 1 MGR-NSREKRDIFYRKAKQEGWRARSAFKLLQVDEEFNIFENVKRAVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
Q ++++ +DL +AP+ G + ++ DIT + + V G +A LV+ DG+
Sbjct: 60 QQE--EDAIIVSVDLQEMAPLEGVIEIQGDITSEKTAEEI--VHHFKGKKA-QLVVCDGA 114
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
P+V G + Q L++ ++ + + L G+FV+K+FR +D + + FE+V
Sbjct: 115 PDVTGMHDIDEYIQLQLILAALNITSHVLEEGGSFVSKIFRGKDITLLYSQCSIFFERVY 174
Query: 181 VDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ 219
KP +SR++S E +++ +K P PR++D FQ
Sbjct: 175 CAKPKSSRNSSLESFVVCKGFKLPKNYIPRMVDPLLDFQ 213
>gi|192359469|ref|YP_001983134.1| ribosomal RNA large subunit J [Cellvibrio japonicus Ueda107]
gi|226703290|sp|B3PLQ4.1|RLME_CELJU RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|190685634|gb|ACE83312.1| ribosomal RNA large subunit J [Cellvibrio japonicus Ueda107]
Length = 211
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 108/192 (56%), Gaps = 3/192 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D+Y + + GYR+RAS+KL++L+ K +R V+DL AAPGGW QVA Q+V
Sbjct: 13 EHFSDQYVKKSHADGYRTRASYKLLELNDKDRLIRPGMLVVDLGAAPGGWSQVAGQQVGT 72
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ D++P+ + G ++ D T +++ G DLV+ D +PN+ G
Sbjct: 73 HGRVVASDILPMDTLEGVEFIQGDFTDDSV---FNQILLAIGDTPVDLVISDMAPNMSGI 129
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
A + LV ++ +A + L P+G FV KVF + Y L LK FEKV + KP A
Sbjct: 130 NAVDQPQAMYLVELALDMAKRVLKPQGNFVAKVFHGEGYDQYLKDLKGCFEKVVIRKPDA 189
Query: 187 SRSASAEIYLLG 198
SRS S E+Y++G
Sbjct: 190 SRSRSREVYVVG 201
>gi|452963162|gb|EME68244.1| 23S rRNA methylase [Magnetospirillum sp. SO-1]
Length = 256
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 109/198 (55%), Gaps = 9/198 (4%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV---- 66
D Y AK GYRSRA++K++QLD +F L+ V+DL AAPGGW QVAV++V
Sbjct: 53 DPYVHEAKRLGYRSRAAFKMIQLDERFHILKPGLRVVDLGAAPGGWTQVAVEKVGALKPQ 112
Query: 67 -GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
G V+G+D++ P+ GA++L+ D + R+K+ + D+VL D + G
Sbjct: 113 GGGKVVGIDILEWDPLPGAITLQGDFLADDAPDRLKEALGG----PADVVLSDMAAPTTG 168
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
+ + + LV ++ A + L P GTFV KVF+ ++L LK+ F V KP
Sbjct: 169 HPSTDHLRIIGLVEVALHFALEILTPGGTFVAKVFQGGTEKTLLDQLKKNFTTVRHAKPP 228
Query: 186 ASRSASAEIYLLGIKYKA 203
ASR SAE Y++ ++
Sbjct: 229 ASRQGSAETYVVATGFRG 246
>gi|312385342|gb|EFR29867.1| hypothetical protein AND_00887 [Anopheles darlingi]
Length = 308
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 127/230 (55%), Gaps = 14/230 (6%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYRLAKE G+R+R+++KL+ LD ++ L +DLCAAPG W QV
Sbjct: 1 MGKT-SKDKRDIYYRLAKEEGWRARSAFKLIHLDETYNILDGVTRAVDLCAAPGSWSQVL 59
Query: 61 VQRVPVG--------SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAF 112
+R+ + ++ +DL + P+ G + L DIT+ + +E G +A
Sbjct: 60 SKRLYLSREEKDRDEVKIVAVDLQAMGPLPGVIQLRGDITRFTTAEAIISHFDE-GQKA- 117
Query: 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCL 172
LV+ DG+P+V G + Q+ L++ ++ + T L P GTFV K+FR + S+ L
Sbjct: 118 QLVICDGAPDVTGLHDMDEYLQSQLLLAALGITTFVLVPGGTFVAKIFRGKCTHSLYSQL 177
Query: 173 KQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSV 222
+ F+ V++ KP +SR++S E +++ Y P P+ ++ L Q SV
Sbjct: 178 RIFFDTVDIAKPQSSRNSSIEAFVVCQGYNPPEGYIPQEIN---LLQDSV 224
>gi|6759446|emb|CAB69851.1| cell division-like protein [Arabidopsis thaliana]
Length = 287
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 112/198 (56%), Gaps = 23/198 (11%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK R D YYR AKE G+R+R+++KL+Q+D +F+ V+DLCAAPG W QV
Sbjct: 1 MGKASRDKR-DIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVL 59
Query: 61 VQR--VPVGS----------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEH- 107
++ +P S L++ +DL P+API G + ++ DIT AR +V+ H
Sbjct: 60 SRQLYLPAKSSAESKDGDLPLIVAIDLQPMAPIEGVIQVQGDITN----ARTAEVVIRHF 115
Query: 108 -GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYS 166
G +A DLV+ DG+P+V G + Q+ L++ + + T L G F+ K+FR +D +
Sbjct: 116 DGCKA-DLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHILKEGGKFIAKIFRGKD-T 173
Query: 167 SVLYCLKQLFEKVEVDKP 184
S+LYC Q F E P
Sbjct: 174 SLLYC--QAFAVCENYSP 189
>gi|91775135|ref|YP_544891.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylobacillus
flagellatus KT]
gi|123380563|sp|Q1H387.1|RLME_METFK RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|91709122|gb|ABE49050.1| 23S rRNA Um-2552 2'-O-methyltransferase [Methylobacillus
flagellatus KT]
Length = 207
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 112/194 (57%), Gaps = 3/194 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D++ + A+ GYR+RA++KL+++D K ++ ++DL +APG W QVAVQR+
Sbjct: 13 EHVNDEFVKRAQRDGYRARAAYKLLEIDDKDQLIKPGMTIVDLGSAPGSWSQVAVQRLAG 72
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ LD++ + PI G ++ D + E ++K + V DLV+ D +PN+ G
Sbjct: 73 QGRVIALDILEMPPIPGVEFIQGDFREEEILLVLEKSLNGKPV---DLVIADMAPNISGI 129
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ LV +++ + ++L P G F+ KVF + ++ ++ FEKV KP A
Sbjct: 130 SDVDQARAAYLVELALEFSREWLKPGGNFLVKVFVGSGFDEIVMAMRDSFEKVVTRKPKA 189
Query: 187 SRSASAEIYLLGIK 200
SR S+E+YLLG+K
Sbjct: 190 SRDRSSEVYLLGLK 203
>gi|262094401|gb|ACY09330.1| cell division protein [Heliconius melpomene melpomene]
Length = 253
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 123/222 (55%), Gaps = 17/222 (7%)
Query: 14 YRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSL---- 69
YRLAKE G+R+R+++KL+Q++ +++ +DLCAAPG W QV +++ +
Sbjct: 1 YRLAKEEGWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQVLTKKLRQNTSNTDD 60
Query: 70 --VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAW 127
++ +DL +A + G ++ DITK + K E G++A DLV+ DG+P+V G
Sbjct: 61 VKIVAVDLQAMAALPGVKQIQGDITKISTAHEIIK--EFEGLKA-DLVVCDGAPDVTGLH 117
Query: 128 AQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAAS 187
+ Q+ L++ ++ + T L G FV K+FR +D + + LK F+ V V KP +S
Sbjct: 118 DIDEYVQSQLLLAALNITTHXLKEGGVFVAKIFRGKDVTLLYSQLKLFFDYVTVSKPRSS 177
Query: 188 RSASAEIYLLGIKYKAPAKIDPR----LLDVKYL----FQGS 221
R++S E +++ Y AP P LLD KY F GS
Sbjct: 178 RNSSIEAFVICQNYXAPPGYVPTMVNPLLDHKYCNFNQFTGS 219
>gi|288958935|ref|YP_003449276.1| cell division protein methyltransferase [Azospirillum sp. B510]
gi|288911243|dbj|BAI72732.1| cell division protein methyltransferase [Azospirillum sp. B510]
Length = 235
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 111/200 (55%), Gaps = 7/200 (3%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y A + GYRSRA++KL+QLD KF L V+DL AAPGGW Q+AV++V V
Sbjct: 35 RHLNDPYVAEATKRGYRSRAAFKLLQLDEKFRLLGPGKRVVDLGAAPGGWTQIAVEKVQV 94
Query: 67 ---GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNV 123
G V+GLD++P+ P+ GA +++ D + R+K+ + DLVL D +
Sbjct: 95 AREGWKVVGLDILPMDPVPGATTMQADFLEEGAADRLKEALGGPA----DLVLSDMAAPT 150
Query: 124 GGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDK 183
G + + L + A + LAP G FV K+F+ S+L L++ F V+ K
Sbjct: 151 TGHQQTDHLRIMGLAEAAYDFAEEVLAPGGAFVAKLFQGGAERSLLDRLRRDFAVVKHAK 210
Query: 184 PAASRSASAEIYLLGIKYKA 203
P ASR+ S+E Y++ ++
Sbjct: 211 PPASRAESSETYVVATGFRG 230
>gi|15791077|ref|NP_280901.1| hypothetical protein VNG2263G [Halobacterium sp. NRC-1]
gi|169236828|ref|YP_001690028.1| 23S rRNA methyltransferase [Halobacterium salinarum R1]
gi|74568838|sp|Q9HN40.1|RLME_HALSA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226703307|sp|B0R7G3.1|RLME_HALS3 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|10581676|gb|AAG20381.1| cell division protein [Halobacterium sp. NRC-1]
gi|167727894|emb|CAP14682.1| 23S rRNA (uridine-2'-O-) methyltransferase [Halobacterium salinarum
R1]
Length = 259
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 106/194 (54%), Gaps = 7/194 (3%)
Query: 8 HRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVG 67
+R D YY +K+ GYRSRA++KL QLD +F L +V+DL AAPGGW+QVA +R
Sbjct: 3 NRKDHYYNKSKQEGYRSRAAYKLQQLDDRFDVLFGGASVVDLGAAPGGWLQVAAERAGAR 62
Query: 68 SLVLGLDLVPIAPIRGAVSLEQ---DITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVG 124
V+G+D I LE D+T+ E R RV+ + D+V+ D +P++
Sbjct: 63 GKVVGVDFQSITQFETDAGLETVRGDMTEDETRQRVRDAAN----GSADVVVSDMAPDMT 118
Query: 125 GAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKP 184
G + + L +++ A + L G FV KVF +D+ +L ++ F V P
Sbjct: 119 GEYDLDHARSVHLARQALETARELLDAGGHFVVKVFDGRDFQDLLADIEDEFAFVATHSP 178
Query: 185 AASRSASAEIYLLG 198
ASR AS+E+Y++G
Sbjct: 179 DASRDASSELYVVG 192
>gi|448747661|ref|ZP_21729317.1| Ribosomal RNA large subunit methyltransferase E [Halomonas
titanicae BH1]
gi|445564773|gb|ELY20889.1| Ribosomal RNA large subunit methyltransferase E [Halomonas
titanicae BH1]
Length = 227
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 113/199 (56%), Gaps = 3/199 (1%)
Query: 5 KGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV 64
K +H D+Y + + + GYRSRAS+KL++LD K LR V+DL AAPGGW Q+A +RV
Sbjct: 32 KKEHFDDQYVKQSWQDGYRSRASYKLIELDEKDKLLRPGMTVIDLGAAPGGWSQIAAERV 91
Query: 65 PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVG 124
+V+ D++ + + G ++ D T+ + K ++ R DLV+ D +PN+
Sbjct: 92 GPEGVVIASDILEMDALAGVDFIQGDFTEEAVLEAILKCLDN---RRVDLVMSDMAPNMS 148
Query: 125 GAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKP 184
G A + LV +++LA + L+P G F+ KVF+ + + + L L+ F KV KP
Sbjct: 149 GMAAIDQPQAMYLVELALELARETLSPGGRFLAKVFQGEGFDAYLKELRGSFNKVVTRKP 208
Query: 185 AASRSASAEIYLLGIKYKA 203
ASR+ S E+Y L ++
Sbjct: 209 DASRARSREVYFLAEGFRG 227
>gi|407044201|gb|EKE42437.1| ribosomal RNA large subunit methyltransferase J protein [Entamoeba
nuttalli P19]
Length = 231
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 108/191 (56%), Gaps = 3/191 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
K +DK++R AK+ GYR+R+++KL+ ++ F H V+DLCAAPG W QV + +
Sbjct: 2 KTTIDKFHRQAKQEGYRARSAFKLIDVERDFHIFDGVHNVVDLCAAPGSWSQVLSKTIKE 61
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
++ +DL IAPI G ++ DITK + K+VM DL++ DG+P+V G
Sbjct: 62 PKNIVSVDLQDIAPIEGVTLVKGDITK---GSTAKEVMSHFTNGKADLIICDGAPDVTGI 118
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ +Q L+ + + L G+FV K+F +Y + + K +FE V + KP +
Sbjct: 119 HDIDEANQWILMQAAFSIMAVVLKQGGSFVAKIFVENEYPHLYFQFKSVFESVTIYKPES 178
Query: 187 SRSASAEIYLL 197
SRS+S E +++
Sbjct: 179 SRSSSYEHFVV 189
>gi|352104769|ref|ZP_08960522.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Halomonas sp. HAL1]
gi|350598691|gb|EHA14801.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Halomonas sp. HAL1]
Length = 227
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 115/199 (57%), Gaps = 3/199 (1%)
Query: 5 KGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV 64
K +H D+Y + + + GYRSRAS+KL++LD K LR V+DL AAPGGW Q+A +RV
Sbjct: 32 KKEHFDDQYVKQSWQDGYRSRASYKLIELDEKDKLLRPGMTVIDLGAAPGGWSQIAAERV 91
Query: 65 PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVG 124
+V+ D++ + + G ++ D T+ A ++ +++ R DLV+ D +PN+
Sbjct: 92 GPEGVVIASDILEMDALAGVDFIQGDFTE---EAVLEAILKRLDNRRVDLVMSDMAPNMS 148
Query: 125 GAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKP 184
G A + LV +++LA + L+P G F+ KVF+ + + + L L+ F KV KP
Sbjct: 149 GMAAIDQPQAMYLVELALELARETLSPGGRFLAKVFQGEGFDAYLKELRSSFSKVVTRKP 208
Query: 185 AASRSASAEIYLLGIKYKA 203
ASR+ S E+Y L ++
Sbjct: 209 DASRARSREVYFLAEGFRG 227
>gi|387128715|ref|YP_006297320.1| cell division protein FtsJ / Ribosomal RNA large subunit
methyltransferase J [Methylophaga sp. JAM1]
gi|386275777|gb|AFI85675.1| Cell division protein FtsJ / Ribosomal RNA large subunit
methyltransferase J [Methylophaga sp. JAM1]
Length = 205
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 109/192 (56%), Gaps = 3/192 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y + A++ GYRSRA++KL ++D K +R+ +V+DL +APGGW A+ RV
Sbjct: 13 EHFDDPYVKKAQQKGYRSRATFKLEEIDQKDKLIRNGMSVVDLGSAPGGWSDYALHRVGD 72
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ LD++P+ P+ G +E D + ++ +V+ + DLVL D +PN+ G
Sbjct: 73 KGKVIALDILPMTPLTGVHFIEGDFREDHVLEQLNEVLAGQSI---DLVLSDMAPNMTGV 129
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
A + LV ++ A L+ +G F+ KVF+ + + L ++ F KV KP A
Sbjct: 130 GAIDQPGSMYLVELALDFAINNLSKQGDFLVKVFQGEGFDEFLKFMRAHFNKVITRKPDA 189
Query: 187 SRSASAEIYLLG 198
SR+ S E+YLLG
Sbjct: 190 SRARSREVYLLG 201
>gi|393769849|ref|ZP_10358366.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylobacterium sp.
GXF4]
gi|392724671|gb|EIZ82019.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylobacterium sp.
GXF4]
Length = 241
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 106/193 (54%), Gaps = 4/193 (2%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y AK GYRSRA++KL+++D ++ LR V+DL AAPGGW QVA + V V
Sbjct: 42 DPYVARAKREGYRSRAAYKLIEIDERYKLLRPGQRVVDLGAAPGGWSQVAARIVGATGRV 101
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL+ I P+ G + D PE ++ ++ DLVL D + N G +
Sbjct: 102 VGIDLLEIEPMAGVEFITLDFLDPEAPEKLTTLLGGPA----DLVLSDMAANATGHKKTD 157
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ L + + A + LAP G ++ KV + +++L LK+ F V KPAASRS
Sbjct: 158 HLRIIGLAETAAEFAREILAPGGAYLAKVLQGGTENALLADLKRDFTAVRHVKPAASRSD 217
Query: 191 SAEIYLLGIKYKA 203
S+E+Y+L Y++
Sbjct: 218 SSELYVLATGYRS 230
>gi|242009665|ref|XP_002425603.1| ribosomal RNA methyltransferase, putative [Pediculus humanus
corporis]
gi|212509496|gb|EEB12865.1| ribosomal RNA methyltransferase, putative [Pediculus humanus
corporis]
Length = 334
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 123/226 (54%), Gaps = 25/226 (11%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQV- 59
MGK K + D YYRLAKE G+R+R+++KL+Q++ +F+ + V+DL W QV
Sbjct: 1 MGKT-SKDKRDIYYRLAKEEGWRARSAFKLLQINEEFNIFENVTRVVDL------WSQVL 53
Query: 60 --------------AVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVME 105
+ Q++ ++++ +DL P+AP+ G + ++ DITK + K+++E
Sbjct: 54 SRKLYGKDMSKSVDSNQKLSNDTIIVAVDLQPMAPLPGVIQIQGDITK---LSTAKQIIE 110
Query: 106 EHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDY 165
LV+ DG+P+V G + Q+ L++ + + + L GTFV K+FR +D
Sbjct: 111 HFSGSPAQLVVCDGAPDVTGLHDIDEFVQSQLLLAAFNITSHILMKGGTFVAKIFRGKDI 170
Query: 166 SSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
+ + LK F+ V V KP +SR++S E +++ Y+ P P +
Sbjct: 171 TLIYSQLKIFFKFVTVAKPRSSRNSSIEAFVVCQNYQPPNDYVPNM 216
>gi|154251621|ref|YP_001412445.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Parvibaculum
lavamentivorans DS-1]
gi|189040318|sp|A7HSA5.1|RLME_PARL1 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|154155571|gb|ABS62788.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Parvibaculum
lavamentivorans DS-1]
Length = 254
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 106/203 (52%), Gaps = 14/203 (6%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV---- 66
D Y AK GYRSRA++KL ++D K+ FL+ V+DL APGGW QVAV RV
Sbjct: 46 DPYVHAAKREGYRSRAAFKLAEIDDKYRFLKPGGRVVDLGCAPGGWCQVAVARVKAEGGD 105
Query: 67 ------GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
V+GLD + + P+ GA L+ D +VK+++ D+VL D +
Sbjct: 106 AGAEGRHGRVIGLDYLEMDPVPGATILQLDFLSEGADDQVKELLAGEA----DVVLSDMA 161
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
G + M +L + AT+ LAP GTF+ KV R + +L LKQ F+ V
Sbjct: 162 APTTGHKQTDHMRIMSLCEIAAHFATEVLAPGGTFLAKVLRGGTENELLVLLKQHFKTVR 221
Query: 181 VDKPAASRSASAEIYLLGIKYKA 203
KP ASR+ SAE+Y+L +K
Sbjct: 222 HVKPKASRADSAEMYVLAQGFKG 244
>gi|121594725|ref|YP_986621.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Acidovorax sp. JS42]
gi|120606805|gb|ABM42545.1| 23S rRNA Um-2552 2'-O-methyltransferase [Acidovorax sp. JS42]
Length = 237
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 113/203 (55%), Gaps = 11/203 (5%)
Query: 8 HRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV--- 64
H D Y +LA++ GYR+RA++KL ++D + ++ H V+DL ++PG W Q +R+
Sbjct: 35 HVNDTYVKLAQKEGYRARAAYKLKEIDEQLGLIKPGHVVVDLGSSPGAWSQYVRRRLSPD 94
Query: 65 --PVGSL---VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDG 119
VG L ++ LD++P+ PI G L+ D + E A +++ ++ R D+V+ D
Sbjct: 95 GAAVGQLNGVIIALDILPMEPIEGVTFLQGDFREEEVLAGLQEAVQA---RPVDVVVSDM 151
Query: 120 SPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKV 179
+PN+ G + +A+ L+ +V A L P+G V K+F YS ++ K F V
Sbjct: 152 APNLSGVESVDAVRIAHLIELAVDFAVHHLKPEGALVVKLFHGSGYSQLVQLFKDTFRVV 211
Query: 180 EVDKPAASRSASAEIYLLGIKYK 202
+ KP ASR S+E +L+G+ K
Sbjct: 212 KPMKPKASRDKSSETFLVGMGLK 234
>gi|67473519|ref|XP_652522.1| ribosomal RNA methyltransferase [Entamoeba histolytica HM-1:IMSS]
gi|56469380|gb|EAL47134.1| ribosomal RNA methyltransferase, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449704737|gb|EMD44923.1| ribosomal RNA methyltransferase [Entamoeba histolytica KU27]
Length = 231
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 108/191 (56%), Gaps = 3/191 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
K +DK++R AK+ GYR+R+++KL+ ++ F H V+DLCAAPG W QV + +
Sbjct: 2 KTTIDKFHRQAKQEGYRARSAFKLIDVERDFHIFDGVHNVVDLCAAPGSWSQVLSKTIKE 61
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
++ +DL IAPI G ++ DITK + K+VM DL++ DG+P+V G
Sbjct: 62 PKNIVSVDLQDIAPIEGVTLVKGDITK---GSTAKEVMSHFTDGKADLIICDGAPDVTGI 118
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ +Q L+ + + L G+FV K+F +Y + + K +FE V + KP +
Sbjct: 119 HDIDEANQWILMQAAFSIMAVVLKQGGSFVAKIFVENEYPHLYFQFKSVFESVTIYKPES 178
Query: 187 SRSASAEIYLL 197
SRS+S E +++
Sbjct: 179 SRSSSYEHFVV 189
>gi|143459181|sp|A1W8H0.2|RLME_ACISJ RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
Length = 220
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 113/203 (55%), Gaps = 11/203 (5%)
Query: 8 HRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV--- 64
H D Y +LA++ GYR+RA++KL ++D + ++ H V+DL ++PG W Q +R+
Sbjct: 18 HVNDTYVKLAQKEGYRARAAYKLKEIDEQLGLIKPGHVVVDLGSSPGAWSQYVRRRLSPD 77
Query: 65 --PVGSL---VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDG 119
VG L ++ LD++P+ PI G L+ D + E A +++ ++ R D+V+ D
Sbjct: 78 GAAVGQLNGVIIALDILPMEPIEGVTFLQGDFREEEVLAGLQEAVQA---RPVDVVVSDM 134
Query: 120 SPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKV 179
+PN+ G + +A+ L+ +V A L P+G V K+F YS ++ K F V
Sbjct: 135 APNLSGVESVDAVRIAHLIELAVDFAVHHLKPEGALVVKLFHGSGYSQLVQLFKDTFRVV 194
Query: 180 EVDKPAASRSASAEIYLLGIKYK 202
+ KP ASR S+E +L+G+ K
Sbjct: 195 KPMKPKASRDKSSETFLVGMGLK 217
>gi|440295993|gb|ELP88839.1| ribosomal RNA methyltransferase, putative [Entamoeba invadens IP1]
Length = 231
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 110/196 (56%), Gaps = 3/196 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
K +DKY+R AK+ GYR+R+++KL+ ++ F + H V+DLCAAPG W QV +
Sbjct: 2 KGTIDKYHRHAKQEGYRARSAFKLIDVERDFHIFSNVHKVVDLCAAPGSWSQVLSSSIEE 61
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
++ +DL IAPI G ++ DITK + K+VM DLV+ DG+P+V G
Sbjct: 62 PRTLVAVDLQDIAPIDGVTLVKGDITKGK---TAKEVMSHFVDGKADLVICDGAPDVTGV 118
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ +Q L+ + + L G+FV K+F ++ + + K +FE V + KP +
Sbjct: 119 HDIDEANQWILMQAAFSIMAVVLKSGGSFVAKIFVEGEHPHLYFQFKSVFESVTIYKPDS 178
Query: 187 SRSASAEIYLLGIKYK 202
SRSAS E +++ +K
Sbjct: 179 SRSASFEHFVVCKGFK 194
>gi|410665450|ref|YP_006917821.1| ribosomal RNA large subunit methyltransferase J [Simiduia
agarivorans SA1 = DSM 21679]
gi|409027807|gb|AFV00092.1| ribosomal RNA large subunit methyltransferase J [Simiduia
agarivorans SA1 = DSM 21679]
Length = 207
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 112/197 (56%), Gaps = 3/197 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y + A+ GYRSRAS+KL++L+ K R V+DL +APGGW QVA++ V
Sbjct: 13 EHVNDPYVKRAQVDGYRSRASYKLLELNEKDKLFRPHQVVMDLGSAPGGWSQVAMKLVGE 72
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ D++P+ I ++ D T+ + ++M A D+V+ D +PN+ G
Sbjct: 73 HGRVIASDILPMDAIAQVEFIQGDFTEDKV---FDQIMATINSDAVDVVISDMAPNISGV 129
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
A + S LV ++ +A Q L KG+FV KVF + Y L +++ F+KV + KPAA
Sbjct: 130 NAADQASSMYLVELALDMARQVLRKKGSFVAKVFMGEGYDDYLKDVRESFDKVVIRKPAA 189
Query: 187 SRSASAEIYLLGIKYKA 203
SR+ S E+Y++ +K
Sbjct: 190 SRARSREVYVVAKGFKG 206
>gi|126664481|ref|ZP_01735465.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Marinobacter sp. ELB17]
gi|126630807|gb|EBA01421.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Marinobacter sp. ELB17]
Length = 206
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 115/197 (58%), Gaps = 3/197 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D + + A+ GYRSR+S+KL+++++K ++ + V+DL +APGGW QVA V
Sbjct: 13 EHVNDPFVKKAQMDGYRSRSSYKLLEINAKDKLIQPTMTVMDLGSAPGGWSQVATDLVGH 72
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ D++P+ + G ++ D T+ + V+ + V D+V+ D +PN+ G
Sbjct: 73 KGRVIASDILPMDAVAGVEFIQGDFTENAVFEEIMAVLRDAKV---DVVISDMAPNISGV 129
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
A + + L+ ++ +A+Q L PKG+FV KVF Y + +++ F+KV V KP +
Sbjct: 130 NAADQAASMYLIELALDMASQVLKPKGSFVAKVFHGGGYDGYVKAVREQFDKVVVRKPDS 189
Query: 187 SRSASAEIYLLGIKYKA 203
SR+ S E+YL+G ++
Sbjct: 190 SRARSREVYLVGKGFRG 206
>gi|163852846|ref|YP_001640889.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylobacterium
extorquens PA1]
gi|163664451|gb|ABY31818.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylobacterium
extorquens PA1]
Length = 239
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 107/195 (54%), Gaps = 4/195 (2%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y AK GYRSRA++KL+++D +F L+ ++DL AAPGGW QVA + + +
Sbjct: 39 DPYVARAKREGYRSRAAFKLLEIDERFKLLKPGQRIVDLGAAPGGWSQVAARILGESGRI 98
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL+ I P+ GA + D P R+ +++ G RA DLVL D + N G +
Sbjct: 99 VGIDLLEIEPMPGATFITLDFLDPSAPERLTELL---GGRA-DLVLSDMAANTTGHKKTD 154
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ L + A + LAP G ++ KVF+ +L LK+ F V KP ASR+
Sbjct: 155 HLRIIGLAETAAAFAREILAPGGAYLAKVFQGGTEGDLLTELKRDFATVRHVKPQASRAD 214
Query: 191 SAEIYLLGIKYKAPA 205
S+E+Y+L ++ A
Sbjct: 215 SSELYVLATGFRGEA 229
>gi|332255476|ref|XP_003276857.1| PREDICTED: LOW QUALITY PROTEIN: putative ribosomal RNA
methyltransferase 1 [Nomascus leucogenys]
Length = 329
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 126/224 (56%), Gaps = 14/224 (6%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE+G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 1 MGRTS-KDKRDVYYRLAKENGWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVL 59
Query: 61 VQRV-PVGS-LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
Q++ GS V+ +DL +AP+ G V ++ DIT+ + K++++ DLV+ D
Sbjct: 60 SQKIGGQGSGHVVAVDLQAMAPLPGVVQIQGDITQ---LSTAKEIIQHFKGCPADLVVCD 116
Query: 119 GSPNVGGAWAQEAMSQ--NALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
G+P+ G Q+ Q L++ ++ +AT L P G FV K+FR +D + + L+ F
Sbjct: 117 GAPD--GKXQQKVGGQAGAPLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLQVFF 174
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKIDP----RLLDVKY 216
V KP +SR++S E + + Y P P LLD Y
Sbjct: 175 SSVLCAKPRSSRNSSIEAFAVCQGYDPPEGFIPDLSKPLLDHSY 218
>gi|224033613|gb|ACN35882.1| unknown [Zea mays]
gi|413939351|gb|AFW73902.1| hypothetical protein ZEAMMB73_056426 [Zea mays]
Length = 190
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 108/185 (58%), Gaps = 21/185 (11%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+Q+D +F+ V+DLCAAPG W QV
Sbjct: 1 MGKAS-KDKRDIYYRKAKEEGWRARSAFKLLQIDQEFNIFHGVKHVVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGS------------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEH- 107
+ + V + L++ +DL P+API G + ++ DIT AR V+ H
Sbjct: 60 SRNLYVPAKQSSDCKEGDLPLIVAIDLQPMAPIEGVIQVQGDITN----ARTADVVIRHF 115
Query: 108 -GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYS 166
G +A DLV+ DG+P+V G + Q+ L++ ++ + T L G FV K+FR +D +
Sbjct: 116 DGCKA-DLVVCDGAPDVTGLHDMDEFVQSQLILAALAIVTHVLKVGGKFVAKIFRGKD-T 173
Query: 167 SVLYC 171
S+LYC
Sbjct: 174 SLLYC 178
>gi|76801271|ref|YP_326279.1| ribosomal RNA methyltransferase [Natronomonas pharaonis DSM 2160]
gi|83305661|sp|Q3IT24.1|RLME_NATPD RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|76557136|emb|CAI48710.1| 23S rRNA (uridine-2'-O-) methyltransferase [Natronomonas pharaonis
DSM 2160]
Length = 252
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 103/189 (54%), Gaps = 5/189 (2%)
Query: 9 RLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGS 68
R D YY AK+ GYRSRA++KL QLD + V+DL AAPGGW+QVA +
Sbjct: 3 RKDDYYNRAKQQGYRSRAAYKLKQLDEAADLINEGDTVVDLGAAPGGWLQVANELAGEAG 62
Query: 69 LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWA 128
V+G+DL I PI G ++ D+T+ R +V+ ++ E D+V+ D +PN+ G ++
Sbjct: 63 TVVGVDLQRIDPIEGVETVRGDMTEDATREKVRALVGEA-----DVVISDMAPNMTGEYS 117
Query: 129 QEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASR 188
+ L + + A LAP G V KVF D + + + FE V P ASR
Sbjct: 118 LDHARSVHLARMAFETALDLLAPNGDLVAKVFEGPDTDDLRADIDREFEYVRTIHPDASR 177
Query: 189 SASAEIYLL 197
+S+E++++
Sbjct: 178 DSSSELFMV 186
>gi|326386107|ref|ZP_08207731.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Novosphingobium
nitrogenifigens DSM 19370]
gi|326209332|gb|EGD60125.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Novosphingobium
nitrogenifigens DSM 19370]
Length = 225
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 104/193 (53%), Gaps = 5/193 (2%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y + A+ G+RSRA++K+++LD KF+ L+ + V+DL APGGW QV QR P+ V
Sbjct: 32 DPYVQKARAEGWRSRAAFKMIELDEKFALLKGARRVVDLGIAPGGWSQVVRQRAPLAK-V 90
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL+P PI G + D E + ++ DLV+ D + N G +
Sbjct: 91 VGIDLLPTDPIEGVTIFQMDFMADEAPEALTGALDGPP----DLVISDMAANTVGHKQTD 146
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ LV +V A LAP G FV KVF +++L LK+ F V+ KP ASR
Sbjct: 147 HLRTMGLVETAVDFAITHLAPGGAFVAKVFAGGTDTTLLNLLKRNFTTVKHAKPPASRKD 206
Query: 191 SAEIYLLGIKYKA 203
S+E Y++ +K
Sbjct: 207 SSEWYVIAQGFKG 219
>gi|338998862|ref|ZP_08637523.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Halomonas sp. TD01]
gi|338764244|gb|EGP19215.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Halomonas sp. TD01]
Length = 227
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 112/199 (56%), Gaps = 3/199 (1%)
Query: 5 KGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV 64
K +H D+Y + + GYRSRAS+KL++LD K R V+DL AAPGGW Q+A ++V
Sbjct: 32 KKEHFDDQYVKQRWQDGYRSRASYKLLELDDKDKLFRPGMTVIDLGAAPGGWSQIAAEKV 91
Query: 65 PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVG 124
+V+ D++ + + G ++ D T+ + ++E G R DLV+ D +PN+
Sbjct: 92 GPDGVVIASDILEMDALAGVDFIQGDFTEESV---LNAILERLGNRQVDLVMSDMAPNMS 148
Query: 125 GAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKP 184
G A + LV +++LA + L P G F+ KVF+ + + + L L+ F++V KP
Sbjct: 149 GMAAIDQPQAMYLVELALELARETLPPGGRFLAKVFQGEGFDTYLKELRSSFDRVVTRKP 208
Query: 185 AASRSASAEIYLLGIKYKA 203
ASR+ S E+Y L ++
Sbjct: 209 DASRARSREVYFLAEGFRG 227
>gi|307546735|ref|YP_003899214.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Halomonas elongata DSM
2581]
gi|307218759|emb|CBV44029.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Halomonas elongata DSM
2581]
Length = 225
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 113/197 (57%), Gaps = 3/197 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D+Y + + + GYRSRAS+KL+ LD K LR V+DL AAPGGW QVA ++V
Sbjct: 32 EHFDDRYVQQSWQDGYRSRASYKLLALDEKDRLLRPGMTVIDLGAAPGGWSQVAAEKVGD 91
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ D++ + + G ++ D T+ +++++ G R DLV+ D +PN+ G
Sbjct: 92 EGRVIASDILEMDALAGVDFVQGDFTEDSV---LEEILARIGDRPVDLVMSDMAPNMSGM 148
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
A + LV ++ LA Q L+P G F+ KVF+ + + + L L+ F++V KP A
Sbjct: 149 AAIDQPQAMYLVELALDLARQTLSPGGVFLAKVFQGEGFDAYLKELRAGFKRVVTRKPEA 208
Query: 187 SRSASAEIYLLGIKYKA 203
SR+ S E+YLL ++
Sbjct: 209 SRARSREVYLLAEGFRG 225
>gi|344339771|ref|ZP_08770699.1| Ribosomal RNA large subunit methyltransferase E [Thiocapsa marina
5811]
gi|343800507|gb|EGV18453.1| Ribosomal RNA large subunit methyltransferase E [Thiocapsa marina
5811]
Length = 206
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 103/187 (55%), Gaps = 3/187 (1%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y + A+ GYRSRA++KL+++ K R VLDL AAPG W Q+A + V V
Sbjct: 17 DPYVKRAQREGYRSRAAYKLLEIQEKDRIFRPGMRVLDLGAAPGSWSQIAARLVGARGSV 76
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+ LDL+P+ P+ G V ++ D +PE R+ + G + DLVL D +PN+ G +
Sbjct: 77 VALDLLPMDPLAGVVVMQGDFREPEILDRLCATL---GGESLDLVLSDMAPNITGMTVVD 133
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
LV ++ LA L P G V KVF+ + +L L++ F KV KP +SRS
Sbjct: 134 QPRSMYLVELALDLARSRLQPGGALVVKVFQGTGFDDILTELRRSFAKVVSRKPKSSRSQ 193
Query: 191 SAEIYLL 197
S E+YL+
Sbjct: 194 SRELYLV 200
>gi|355689328|gb|AER98797.1| FtsJ-like protein 3 [Mustela putorius furo]
Length = 306
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 120/198 (60%), Gaps = 21/198 (10%)
Query: 608 FEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQREQILDDAYNRYMFDDD 667
FEIVP +D + D E ++A +KK R ++DD+++RY F+++
Sbjct: 109 FEIVPI------EDPAKHRVLDPEGLALGALIASSKKAKR-----DLIDDSFSRYAFNEE 157
Query: 668 G--LPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKL 725
LP+WF++EE++HR PV K+E+ + +++EI+ARP KKVAEAKARKKR ++KL
Sbjct: 158 EGELPEWFVQEEKQHRLRQLPVDKKEVEHYRRRWREINARPIKKVAEAKARKKRRMLKKL 217
Query: 726 EKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKE--YVVAKKGV--QVRAGKGK 781
E+ +KKA + + DIS+R K Q+ LYK A + K++ YVVAKKGV +VR G
Sbjct: 218 EQTKKKAEAVVNTVDISEREKVAQLRSLYKKAGLGKEKRQVTYVVAKKGVGRKVRRPAGV 277
Query: 782 V----LVDPRMKKDSRTH 795
+VD RMKKD R
Sbjct: 278 RGHFKVVDSRMKKDQRAQ 295
>gi|419954429|ref|ZP_14470567.1| 23S rRNA methyltransferase J [Pseudomonas stutzeri TS44]
gi|387968762|gb|EIK53049.1| 23S rRNA methyltransferase J [Pseudomonas stutzeri TS44]
Length = 212
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 112/197 (56%), Gaps = 3/197 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y ++A++ GYRSRAS+KL+++ K LR V+DL AAPGGW QV + +
Sbjct: 13 EHFDDPYVKMAQKDGYRSRASYKLLEIQEKDRILRPGMTVVDLGAAPGGWSQVTSRVIGD 72
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
++ D++P+ I ++ D T+ A++ + EH V DLV+ D +PN+ G
Sbjct: 73 KGRLIASDILPMDSIADVTFIQGDFTEDAVFAQILDAIGEHPV---DLVISDMAPNMSGV 129
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
A + L ++ LAT+ L P G F+ K+F+ + + + L ++Q F+KV++ KP +
Sbjct: 130 RASDQPRAMFLCELALDLATRVLRPGGDFLIKIFQGEGFDAYLKDVRQNFDKVQMRKPLS 189
Query: 187 SRSASAEIYLLGIKYKA 203
SR S E YLL +K
Sbjct: 190 SRDRSREQYLLARGFKG 206
>gi|83312878|ref|YP_423142.1| 23S rRNA methylase [Magnetospirillum magneticum AMB-1]
gi|123540815|sp|Q2W0P2.1|RLME_MAGSA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|82947719|dbj|BAE52583.1| 23S rRNA methylase [Magnetospirillum magneticum AMB-1]
Length = 244
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 109/198 (55%), Gaps = 9/198 (4%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV---- 66
D Y AK GYRSRA++K++QLD +F L+ V+DL AAPGGW QVAV++V
Sbjct: 48 DPYVHEAKRLGYRSRAAFKMIQLDERFHILKPGLRVVDLGAAPGGWTQVAVEKVGALKPK 107
Query: 67 -GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
G V+G+D++ P+ GA++L+ D + R+K+ + D+VL D + G
Sbjct: 108 GGGKVVGMDILEWDPLPGAITLQGDFLADDAPDRLKEALGGPA----DVVLSDMAAPTTG 163
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
+ + + LV ++ A + L P GTFV KVF+ ++L LK+ F V KP
Sbjct: 164 HPSTDHLRIIGLVEVALHFALEVLTPGGTFVAKVFQGGTEKTLLDQLKKNFTTVRHAKPP 223
Query: 186 ASRSASAEIYLLGIKYKA 203
ASR SAE Y++ ++
Sbjct: 224 ASRQGSAETYVVATGFRG 241
>gi|432853581|ref|XP_004067778.1| PREDICTED: pre-rRNA processing protein FTSJ3-like [Oryzias latipes]
Length = 857
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/226 (39%), Positives = 131/226 (57%), Gaps = 29/226 (12%)
Query: 605 EGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQREQILDDAYNRYMF 664
E DF++VP +S+S ++ ++ + L C +KK R+ ++D++++RY
Sbjct: 634 EDDFQVVPV-------ESTSKKARI--LNAEGLALGCQIATSKKKTRD-LVDNSFHRYAH 683
Query: 665 DDDG--LPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAM 722
+D +P+WFL++ER+HRQ VTKE + K ++KEI+ARP K+VAEAKARKKR +
Sbjct: 684 SEDTWEVPEWFLDDERKHRQRPVEVTKEMVEEYKQKWKEINARPIKRVAEAKARKKRRML 743
Query: 723 RKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKE--YVVAKKGV--QVRAG 778
+K E+ +KKA + + DIS+R K Q++ +YK A + K+E YVV KKG +VR
Sbjct: 744 KKTEQAKKKAEAVVNTVDISEREKMAQLKSIYKKAGLGKEKREVTYVVTKKGAGKKVRRP 803
Query: 779 KGKV----LVDPRMKKDSRTHGSGKARKGGSKKGNIGKARKGKGSV 820
G +VD RMKKD R G RK KG KGKG
Sbjct: 804 PGVKGVFKVVDGRMKKDMR----GMQRKEQHAKGG-----KGKGRH 840
>gi|149375763|ref|ZP_01893531.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Marinobacter algicola
DG893]
gi|149359888|gb|EDM48344.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Marinobacter algicola
DG893]
Length = 206
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 112/189 (59%), Gaps = 3/189 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D + + ++E GYRSRAS+KL++LD+K R V+DL AAPGGW QVA++RV
Sbjct: 13 EHFDDVWVKKSREDGYRSRASYKLIELDNKDRLFRPGQTVVDLGAAPGGWSQVAIERVGD 72
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
+V+ D++ ++PI G ++ D T+ + ++ + R D+V+ D +PN+ G
Sbjct: 73 NGVVVASDILEMSPIAGVAFVQGDFTEQSVLDELLDLLGD---RRADVVISDMAPNMSGM 129
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
A + + LV ++ +A Q L P G FV KVF+ + + ++L +++ F V KP +
Sbjct: 130 AAVDIPNAMGLVELALDMAQQVLKPGGVFVAKVFQGEGFDALLAEMRKSFGTVVSRKPDS 189
Query: 187 SRSASAEIY 195
SR+ S EIY
Sbjct: 190 SRARSREIY 198
>gi|448467750|ref|ZP_21599579.1| 23S rRNA methyltransferase J [Halorubrum kocurii JCM 14978]
gi|445811836|gb|EMA61837.1| 23S rRNA methyltransferase J [Halorubrum kocurii JCM 14978]
Length = 265
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 105/189 (55%), Gaps = 5/189 (2%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D+YY +K+ GYRSRAS+KL Q+D + + V+DL AAPGGW+QVA + V V
Sbjct: 5 DEYYNRSKQQGYRSRASYKLKQIDEESALFERGDTVVDLGAAPGGWLQVAAEEVGESGTV 64
Query: 71 LGLDLVPIAPI--RGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWA 128
+G+DL I ++ D+T+ R +++ + E G D V+ D +PN+ G +A
Sbjct: 65 VGVDLQRIDDFEEHDVETIRGDMTEERTRHYLREAVGERGA---DAVISDMAPNMTGEYA 121
Query: 129 QEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASR 188
+ L + +A + LAP G FV KVF+ +D + ++ FE + P ASR
Sbjct: 122 LDHARSVHLARQAFDVAEELLAPGGDFVVKVFQGEDLDAFREDVRAEFEYLRTVSPPASR 181
Query: 189 SASAEIYLL 197
+S+E+YL+
Sbjct: 182 DSSSEVYLV 190
>gi|240140172|ref|YP_002964649.1| ribosomal RNA large subunit methyltransferase J [Methylobacterium
extorquens AM1]
gi|254562611|ref|YP_003069706.1| ribosomal RNA large subunit methyltransferase J [Methylobacterium
extorquens DM4]
gi|418061826|ref|ZP_12699660.1| Ribosomal RNA large subunit methyltransferase E [Methylobacterium
extorquens DSM 13060]
gi|240010146|gb|ACS41372.1| Ribosomal RNA large subunit methyltransferase J (rRNA
(uridine-2'-O-)-methyltransferase) (23S rRNA m2U2552
methyltransferase) [Methylobacterium extorquens AM1]
gi|254269889|emb|CAX25867.1| Ribosomal RNA large subunit methyltransferase J (rRNA
(uridine-2'-O-)-methyltransferase) (23S rRNA m2U2552
methyltransferase) [Methylobacterium extorquens DM4]
gi|373564618|gb|EHP90713.1| Ribosomal RNA large subunit methyltransferase E [Methylobacterium
extorquens DSM 13060]
Length = 239
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 107/195 (54%), Gaps = 4/195 (2%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y AK GYRSRA++KL+++D +F L+ ++DL AAPGGW QVA + + +
Sbjct: 39 DPYVARAKREGYRSRAAFKLLEIDERFKLLKPGQRIVDLGAAPGGWSQVAARILGESGRI 98
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL+ I P+ GA + D P R+ +++ G RA DLVL D + N G +
Sbjct: 99 VGIDLLEIEPMPGATFITLDFLDPSAPERLTELL---GGRA-DLVLSDMAANTTGHKKTD 154
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ L + A + LAP G ++ KVF+ +L LK+ F V KP ASR+
Sbjct: 155 HLRIIGLAETAAVFAREILAPGGAYLAKVFQGGTEGDLLTELKRDFATVRHVKPQASRAD 214
Query: 191 SAEIYLLGIKYKAPA 205
S+E+Y+L ++ A
Sbjct: 215 SSELYVLATGFRGEA 229
>gi|432100102|gb|ELK28995.1| Putative ribosomal RNA methyltransferase 2 [Myotis davidii]
Length = 270
Score = 119 bits (299), Expect = 5e-24, Method: Composition-based stats.
Identities = 77/206 (37%), Positives = 111/206 (53%), Gaps = 14/206 (6%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV-- 64
+H D + + AK YR R+++KL+++D++ LR VLD AAPG W QVAVQRV
Sbjct: 61 RHLKDPFVKAAKVESYRCRSAFKLLEVDTRHRILRPGLRVLDCGAAPGAWSQVAVQRVNA 120
Query: 65 -------PVGSLVLGLDLVPIAPIRGAVSL-EQDITKPECRARVKKVMEEHGVRAFDLVL 116
PVG VLG+DL+ IAP+ GA + D+T P RV++++ G RA D+VL
Sbjct: 121 AGTDPSSPVG-FVLGVDLLHIAPLGGATFVCPADVTDPRTLQRVQELLP--GGRA-DVVL 176
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
D +PN G + L + +A L P GTF+ K + + L + F
Sbjct: 177 SDMAPNATGIRGLDHDRLIGLCWSLLDMAPDLLCPGGTFLCKTWAGSQSHRLQKRLTEEF 236
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYK 202
+ V KP ASR S+E+YLL +Y+
Sbjct: 237 QSVRTLKPEASRKESSEVYLLATQYR 262
>gi|392377558|ref|YP_004984717.1| ribosomal RNA large subunit (23S) methyltransferase [Azospirillum
brasilense Sp245]
gi|356879039|emb|CCC99935.1| ribosomal RNA large subunit (23S) methyltransferase [Azospirillum
brasilense Sp245]
Length = 236
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 110/199 (55%), Gaps = 7/199 (3%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y A + G+RSRA++KL+QLD KF L V+DL AAPGGW QVAV +V
Sbjct: 36 RHLNDPYVHEATKRGFRSRAAFKLLQLDEKFHLLGPGKRVVDLGAAPGGWTQVAVDKVQT 95
Query: 67 ---GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNV 123
G V+GLD++P+ P+ GA +++ D + R+K+ + D+VL D +
Sbjct: 96 AREGWKVVGLDILPMDPVPGATTMQADFLEEGAAERLKEALGGPA----DVVLSDMAAPT 151
Query: 124 GGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDK 183
G + + + AL + A + LAP G FV K+F+ S+L LK+ F V K
Sbjct: 152 IGHQSTDHLRIMALAEAAYDFAEEVLAPGGAFVAKLFQGGAEKSLLERLKRDFTTVRHAK 211
Query: 184 PAASRSASAEIYLLGIKYK 202
P ASR+ S+E Y++ ++
Sbjct: 212 PPASRAESSETYVVATGFR 230
>gi|91788714|ref|YP_549666.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Polaromonas sp. JS666]
gi|123059751|sp|Q129M4.1|RLME_POLSJ RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|91697939|gb|ABE44768.1| 23S rRNA Um-2552 2'-O-methyltransferase [Polaromonas sp. JS666]
Length = 247
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 116/213 (54%), Gaps = 9/213 (4%)
Query: 8 HRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV-PV 66
H D Y +LA++ GYR+RA++KL ++D ++ V+DL + PG W Q +++ P
Sbjct: 34 HINDPYVKLAQKEGYRARAAYKLKEIDETLGLIKPGDCVVDLGSTPGAWSQYVRRKLSPT 93
Query: 67 GSL-------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVM-EEHGVRAFDLVLHD 118
G+ ++GLD++P+ PI G ++ D +PE ++++ + + G DLV+ D
Sbjct: 94 GAAAGELNGRIIGLDMLPMEPIEGVAFIQGDFREPEVLQKLEQALATDKGQVKVDLVISD 153
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
+PN+ G + +A LV +V+ A + P GT V K+F Y ++ + F+
Sbjct: 154 MAPNLSGIESADAARIVHLVELAVEFAQNRMKPDGTLVVKLFHGSGYDELVKLFRATFKV 213
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
V+ KP ASRS S+E +L+G K A+ P L
Sbjct: 214 VKPMKPKASRSNSSETFLVGKGLKKRAETVPEL 246
>gi|209876181|ref|XP_002139533.1| tRNA (uridine-2'-O-)-methyltransferase protein [Cryptosporidium
muris RN66]
gi|209555139|gb|EEA05184.1| tRNA (uridine-2'-O-)-methyltransferase protein, putative
[Cryptosporidium muris RN66]
Length = 264
Score = 119 bits (299), Expect = 6e-24, Method: Composition-based stats.
Identities = 63/185 (34%), Positives = 110/185 (59%), Gaps = 7/185 (3%)
Query: 17 AKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV----GSLVLG 72
AK+ GYR+R+++KL+Q+D + + + +DLCAAPG W QV Q++ +L++
Sbjct: 16 AKQEGYRARSAYKLLQVDQYYPIFKGVNRAVDLCAAPGSWSQVLSQKLNCNENNNALIVS 75
Query: 73 LDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAM 132
+DL +API G ++ DIT + V +++ G DLVL DG+P+V G +
Sbjct: 76 VDLQDMAPIEGVNIIKGDITS---QNTVDIILDYFGGEKADLVLCDGAPDVTGFHDIDEF 132
Query: 133 SQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASA 192
QN L++ ++ + T+ L G+FV K+FR ++ + + + FE V+ KPA+SR++S
Sbjct: 133 IQNQLLLSALSITTKLLCDGGSFVAKIFRGENIAFIYQQMFYYFEYVDCCKPASSRNSSL 192
Query: 193 EIYLL 197
E +++
Sbjct: 193 EAFIV 197
>gi|253999580|ref|YP_003051643.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylovorus
glucosetrophus SIP3-4]
gi|253986259|gb|ACT51116.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylovorus
glucosetrophus SIP3-4]
Length = 207
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 115/197 (58%), Gaps = 3/197 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D++ + A+ GYR+RA++KL+++D K ++ ++DL A PG W QVAVQR+
Sbjct: 13 EHVNDEFVKRAQRDGYRARAAYKLMEIDDKDQLIKPGMTIVDLGATPGSWSQVAVQRLKG 72
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
++ LDL+ +A I G ++ D + A + ++ E+ R DLV+ D +PN+ G
Sbjct: 73 QGRIIALDLLEMAAIPGVDFIQGDFRED---AVLFQLEEKLNNRPIDLVIADMAPNISGI 129
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ + + L +++ + ++L P G F+ KVF + ++ ++ F+KV KP A
Sbjct: 130 SSVDQANAAYLTELALEFSLKWLKPGGNFLVKVFIGSGFDEIMKTMRLGFDKVVTRKPKA 189
Query: 187 SRSASAEIYLLGIKYKA 203
SR S+E+YLLG+K KA
Sbjct: 190 SRDRSSEVYLLGLKRKA 206
>gi|398383744|ref|ZP_10541807.1| 23S rRNA methylase [Sphingobium sp. AP49]
gi|427408984|ref|ZP_18899186.1| ribosomal RNA large subunit methyltransferase E [Sphingobium
yanoikuyae ATCC 51230]
gi|397724189|gb|EJK84664.1| 23S rRNA methylase [Sphingobium sp. AP49]
gi|425713294|gb|EKU76308.1| ribosomal RNA large subunit methyltransferase E [Sphingobium
yanoikuyae ATCC 51230]
Length = 224
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 106/197 (53%), Gaps = 5/197 (2%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y AK+ G+RSRA++KL++LD KF F++ S AV+DL APGGW QV + P
Sbjct: 27 RHLNDPYVHKAKQEGWRSRAAFKLIELDEKFHFVKGSRAVVDLGVAPGGWAQVIRKMAPK 86
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
+ V+G+DL+P+ PI G E D + +++ + + DLV+ D + N G
Sbjct: 87 AA-VVGIDLLPVDPIPGVTLFEMDFMDDKAPDLLREALGQEP----DLVISDMAANTVGH 141
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ + LV + A Q L GTFV KVF + +L LK+ F ++ KP A
Sbjct: 142 AQTDHLRTMGLVEAAADFAVQNLRKGGTFVAKVFAGGTDAELLAVLKKHFTTIKHAKPPA 201
Query: 187 SRSASAEIYLLGIKYKA 203
SR S E Y++ +K
Sbjct: 202 SRKGSVEWYVVAQGFKG 218
>gi|294010578|ref|YP_003544038.1| cell division protein methyltransferase FtsJ [Sphingobium japonicum
UT26S]
gi|292673908|dbj|BAI95426.1| cell division protein methyltransferase FtsJ [Sphingobium japonicum
UT26S]
Length = 215
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 104/192 (54%), Gaps = 5/192 (2%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y R AK G+RSRA++KL++LD KF FL+ S AV+DL APGGW QV + P V
Sbjct: 23 DPYVRRAKAEGWRSRAAFKLIELDEKFHFLKGSRAVVDLGVAPGGWAQVVRKLCPKAK-V 81
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL+P PI G + D + A + + + + A DLV+ D + N G A +
Sbjct: 82 VGIDLLPTDPIPGVTLFQMDFMDDKAPALLAEALGD----APDLVISDMAANTVGHAATD 137
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ LV + A + L GTFV KVF + +L LK+ F ++ KP ASR
Sbjct: 138 HLRTMGLVEAAAMFAVENLRKGGTFVAKVFAGGTDADLLAILKRHFTTIKHAKPPASRKG 197
Query: 191 SAEIYLLGIKYK 202
S E Y++ +K
Sbjct: 198 SVEWYVVAQGFK 209
>gi|378755530|gb|EHY65556.1| hypothetical protein NERG_01163 [Nematocida sp. 1 ERTm2]
Length = 223
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 112/193 (58%), Gaps = 5/193 (2%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D +YR AK GYR+R+++KL+++ +++ L V+DLCAAPG W QV +R+P L
Sbjct: 33 DIHYRKAKSEGYRARSAYKLLEIIEEYNVLVGVSTVIDLCAAPGSWSQVIKERLPDAKL- 91
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
L +DL I PI A+ L+ DIT +++K ++ DL+L DG+P V G +
Sbjct: 92 LSVDLQDIEPISDAIILKGDITADSTISQIKDAFKQK----VDLILCDGAPEVTGLHDLD 147
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
++L+ S +L++Q L+P G F+TKVF + ++ LK+ F V + KP +SR
Sbjct: 148 EYFHSSLIQASCRLSSQLLSPAGCFITKVFTGDSPNILMEDLKEYFTDVIIVKPKSSRIK 207
Query: 191 SAEIYLLGIKYKA 203
S E + + K K+
Sbjct: 208 SKEAFAICHKIKS 220
>gi|448481917|ref|ZP_21605232.1| 23S rRNA methyltransferase J [Halorubrum arcis JCM 13916]
gi|445821616|gb|EMA71405.1| 23S rRNA methyltransferase J [Halorubrum arcis JCM 13916]
Length = 261
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 107/193 (55%), Gaps = 5/193 (2%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D YY +K+ GYR+R+++KL QLD + L V+DL AAPGGW+QVA + V V
Sbjct: 5 DDYYNRSKQQGYRARSAYKLKQLDEEADLLGPGDTVVDLGAAPGGWLQVAAEEVGESGTV 64
Query: 71 LGLDLVPIAPI--RGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWA 128
+G+DL I + +L D+T+ R +++ ++E G D+VL D +PN+ G ++
Sbjct: 65 VGVDLQRIEELDDHDIETLRGDMTEERTRHYLREAVDEGGA---DVVLSDMAPNMTGEYS 121
Query: 129 QEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASR 188
+ L ++ A + LAP G FV KVF+ QD + + F+ V P ASR
Sbjct: 122 LDHARSVHLARQALDTADELLAPGGDFVVKVFQGQDLDAFRDDVADSFQYVRTVSPPASR 181
Query: 189 SASAEIYLLGIKY 201
+S+E+YL+ Y
Sbjct: 182 DSSSEVYLVAKGY 194
>gi|313201615|ref|YP_004040273.1| ribosomal RNA methyltransferase rrmj/ftsj [Methylovorus sp. MP688]
gi|312440931|gb|ADQ85037.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylovorus sp. MP688]
Length = 197
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 115/197 (58%), Gaps = 3/197 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D++ + A+ GYR+RA++KL+++D K ++ ++DL A PG W QVAVQR+
Sbjct: 3 EHVNDEFVKRAQRDGYRARAAYKLMEIDDKDQLIKPGMTIVDLGATPGSWSQVAVQRLKG 62
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
++ LDL+ +A I G ++ D + A + ++ E+ R DLV+ D +PN+ G
Sbjct: 63 QGRIIALDLLEMAAIPGVDFIQGDFRED---AVLLQLEEKLNNRPIDLVIADMAPNISGI 119
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ + + L +++ + ++L P G F+ KVF + ++ ++ F+KV KP A
Sbjct: 120 SSVDQANAAYLTELALEFSLKWLKPGGNFLVKVFIGSGFDEIMKTMRLGFDKVVTRKPKA 179
Query: 187 SRSASAEIYLLGIKYKA 203
SR S+E+YLLG+K KA
Sbjct: 180 SRDRSSEVYLLGLKRKA 196
>gi|326317394|ref|YP_004235066.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323374230|gb|ADX46499.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 218
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 112/200 (56%), Gaps = 11/200 (5%)
Query: 8 HRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV-PV 66
H D Y +LA++ GYR+RA++KL ++D +R V+DL +APG W Q +R+ P
Sbjct: 18 HVNDTYVKLAQKEGYRARAAYKLKEIDETLGLIRPGQVVVDLGSAPGAWSQYLRRRMAPA 77
Query: 67 GS-------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDG 119
G+ ++ LD++P+ PI G L+ D + + AR+++ ++ R D+V+ D
Sbjct: 78 GAATGQLNGTLIALDILPMEPIEGVTFLQGDFREEDVLARLQETVQG---RPVDVVVSDM 134
Query: 120 SPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKV 179
+PN+ G + +A+ L+ +V A Q L P G V K+F Y+ ++ K+ F V
Sbjct: 135 APNLSGVESVDAVRIAHLIELAVDFAQQHLKPDGALVVKLFHGSGYTQLVQLFKENFRTV 194
Query: 180 EVDKPAASRSASAEIYLLGI 199
+ KP ASR S+E +L+G+
Sbjct: 195 KPMKPKASRDKSSETFLVGM 214
>gi|323447697|gb|EGB03609.1| hypothetical protein AURANDRAFT_33790 [Aureococcus anophagefferens]
Length = 311
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/206 (40%), Positives = 117/206 (56%), Gaps = 16/206 (7%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHA-----VLDLCAAPGG 55
MG+ R D YYRLAK YR+RA++KL+QLD+ L ++ V DLCAAPGG
Sbjct: 1 MGRTSRDKR-DIYYRLAKTSNYRARAAFKLLQLDATLGILSTATTHDRLRVADLCAAPGG 59
Query: 56 WMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRA---F 112
W QV +R P G+ V+ +DL P+API G + DIT A ++V++ G A
Sbjct: 60 WSQVVAERRP-GARVVAVDLKPMAPIAGVEMVLGDITA---AATAREVVDALGGGADARR 115
Query: 113 DLVLHDGSPNVGGAWAQEAMSQNALV-IDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYC 171
+VL DG+P+V G + QN L S + FL G FV+KV+R +D +++L
Sbjct: 116 GVVLCDGAPDVIGLNDVDEHLQNELARAASGRREPPFLG--GCFVSKVYRGRDATALLES 173
Query: 172 LKQLFEKVEVDKPAASRSASAEIYLL 197
L++ F V V KP SRSAS E +++
Sbjct: 174 LRKHFRSVFVAKPRCSRSASPEAFVV 199
>gi|218531672|ref|YP_002422488.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylobacterium
extorquens CM4]
gi|218523975|gb|ACK84560.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylobacterium
extorquens CM4]
Length = 239
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 107/195 (54%), Gaps = 4/195 (2%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y AK GYRSRA++KL+++D +F L+ ++DL AAPGGW QVA + + +
Sbjct: 39 DPYVARAKREGYRSRAAFKLLEIDERFKLLKPGQRIVDLGAAPGGWSQVAARILGESGRI 98
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL+ I P+ GA + D P R+ +++ G RA DLVL D + N G +
Sbjct: 99 VGIDLLEIEPMPGATFITLDFLDPSAPERLTELL---GGRA-DLVLSDMAANTTGHKKTD 154
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ L + A + LAP G ++ KVF+ +L LK+ F V KP ASR+
Sbjct: 155 HLRIIGLAETAAVFAREILAPGGAYLAKVFQGGTEGDLLTELKRDFATVRHVKPQASRAD 214
Query: 191 SAEIYLLGIKYKAPA 205
S+E+Y+L ++ A
Sbjct: 215 SSELYVLATGFRGQA 229
>gi|381200990|ref|ZP_09908121.1| ribosomal RNA large subunit methyltransferase E [Sphingobium
yanoikuyae XLDN2-5]
Length = 214
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 106/197 (53%), Gaps = 5/197 (2%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y AK+ G+RSRA++KL++LD KF F++ S AV+DL APGGW QV + P
Sbjct: 17 RHLNDPYVHKAKQEGWRSRAAFKLIELDEKFHFVKGSRAVVDLGVAPGGWAQVIRKMAPK 76
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
+ V+G+DL+P+ PI G E D + +++ + + DLV+ D + N G
Sbjct: 77 AA-VVGIDLLPVDPIPGVTLFEMDFMDDKAPDLLREALGQEP----DLVISDMAANTVGH 131
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ + LV + A Q L GTFV KVF + +L LK+ F ++ KP A
Sbjct: 132 AQTDHLRTMGLVEAAADFAVQNLRKGGTFVAKVFAGGTDAELLAVLKKHFTTIKHAKPPA 191
Query: 187 SRSASAEIYLLGIKYKA 203
SR S E Y++ +K
Sbjct: 192 SRKGSVEWYVVAQGFKG 208
>gi|254516625|ref|ZP_05128684.1| ribosomal RNA large subunit methyltransferase J [gamma
proteobacterium NOR5-3]
gi|219675048|gb|EED31415.1| ribosomal RNA large subunit methyltransferase J [gamma
proteobacterium NOR5-3]
Length = 212
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 107/191 (56%), Gaps = 3/191 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+HR D Y + A+ GYRSRA +KL++L + +R +LDL +APGGW QVA V
Sbjct: 14 EHREDPYVQQAQRDGYRSRACYKLLELQERERLIRPGMTILDLGSAPGGWSQVAAALVGD 73
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ D++P+ I G +E D T+ A ++++ + DLV+ D +PN+ G
Sbjct: 74 HGQVIASDILPMDSIAGVDFVEGDFTE---NAVFERILTTLNGKPADLVISDMAPNMSGV 130
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
A + LV ++ +A + LAP G FVTKVF+ + + + ++ F+KV KP A
Sbjct: 131 SAVDQPKSIYLVELALDMACRVLAPGGVFVTKVFQGEGFDELFKATREQFDKVLTRKPTA 190
Query: 187 SRSASAEIYLL 197
SR S E+YL+
Sbjct: 191 SRPRSREVYLV 201
>gi|338707794|ref|YP_004661995.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Zymomonas mobilis subsp.
pomaceae ATCC 29192]
gi|336294598|gb|AEI37705.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Zymomonas mobilis subsp.
pomaceae ATCC 29192]
Length = 225
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 109/196 (55%), Gaps = 13/196 (6%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y + A+ GYRSRA++KL++LD +FS L+ + ++DL APGGW QVA ++ P +V
Sbjct: 29 DPYVQKAQSEGYRSRAAYKLLELDERFSLLKGAKRIIDLGIAPGGWSQVARKKAPQAKIV 88
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAF----DLVLHDGSPNVGGA 126
G+DL+ API G + D T P V ++H + A DLVL D + N G
Sbjct: 89 -GIDLLEAAPIEGVTIFQNDFTDP--------VAQQHLIEALGGAADLVLSDMAANTIGH 139
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ + ALV ++ A++ L G+FV KV + ++ LK+LF V+ KP A
Sbjct: 140 ARTDHLRTMALVEEAAIFASETLHEGGSFVAKVLAGGADNDLVALLKRLFGHVKHAKPPA 199
Query: 187 SRSASAEIYLLGIKYK 202
SR S+E Y++ +K
Sbjct: 200 SRRESSEWYVIAQNFK 215
>gi|167378804|ref|XP_001734938.1| ribosomal RNA methyltransferase [Entamoeba dispar SAW760]
gi|165903298|gb|EDR28886.1| ribosomal RNA methyltransferase, putative [Entamoeba dispar SAW760]
Length = 231
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 108/191 (56%), Gaps = 3/191 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
K +DK++R AK+ GYR+R+++KL+ ++ F H V+DLCAAPG W QV + +
Sbjct: 2 KTTIDKFHRQAKQEGYRARSAFKLIDVERDFHIFDGVHNVVDLCAAPGSWSQVLSKTIKE 61
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
++ +DL IAPI G ++ DITK + K+VM DL++ DG+P+V G
Sbjct: 62 PKNIVSVDLQDIAPIEGVKLVKGDITK---GSTAKEVMSHFTDGKADLIICDGAPDVTGI 118
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ +Q L+ + + L G+FV K+F +Y + + K +FE V + KP +
Sbjct: 119 HDIDEANQWILMQAAFSIMAVVLKQGGSFVAKIFVENEYPHLYFQFKSVFESVTIYKPES 178
Query: 187 SRSASAEIYLL 197
SRS+S E +++
Sbjct: 179 SRSSSYEHFVV 189
>gi|120611284|ref|YP_970962.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Acidovorax citrulli
AAC00-1]
gi|143459163|sp|A1TQF0.1|RLME_ACIAC RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|120589748|gb|ABM33188.1| 23S rRNA Um-2552 2'-O-methyltransferase [Acidovorax citrulli
AAC00-1]
Length = 218
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 112/200 (56%), Gaps = 11/200 (5%)
Query: 8 HRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV-PV 66
H D Y +LA++ GYR+RA++KL ++D +R V+DL +APG W Q +R+ P
Sbjct: 18 HVNDTYVKLAQKEGYRARAAYKLKEIDETLGLIRPGQVVVDLGSAPGAWSQYLRRRMAPA 77
Query: 67 GS-------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDG 119
G+ ++ LD++P+ PI G L+ D + + AR+++ ++ R D+V+ D
Sbjct: 78 GAAAGQLNGTLIALDILPMEPIEGVTFLQGDFREEDVLARLQEAVQ---ARPVDVVVSDM 134
Query: 120 SPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKV 179
+PN+ G + +A+ L+ +V A Q L P G V K+F Y+ ++ K+ F V
Sbjct: 135 APNLSGVESVDAVRIAHLIELAVDFAQQHLKPDGALVVKLFHGSGYAQLVQLFKEHFRTV 194
Query: 180 EVDKPAASRSASAEIYLLGI 199
+ KP ASR S+E +L+G+
Sbjct: 195 KPMKPKASRDKSSETFLVGM 214
>gi|295689972|ref|YP_003593665.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Caulobacter segnis ATCC
21756]
gi|295431875|gb|ADG11047.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Caulobacter segnis ATCC
21756]
Length = 235
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 109/196 (55%), Gaps = 12/196 (6%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D + A+ GYRSRA++K+ ++D KF F R V+DL APGGW+Q+AV+R V L
Sbjct: 48 DPFSAKARALGYRSRAAFKISEIDEKFHFFRKGARVIDLGCAPGGWLQIAVERG-VTDLA 106
Query: 71 LGLDLVPIAPIRGAVSLEQDIT---KPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAW 127
G+DL+P+ P+ A LE D T PE K+ME G DLV+ D +PN G
Sbjct: 107 -GIDLLPVDPVAPAHILEMDFTADGAPE------KLMEILGGEP-DLVMSDMAPNTVGHR 158
Query: 128 AQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAAS 187
+ + L+ + + A L P G FV K F+ + + V+ LK+ F KV+ KP AS
Sbjct: 159 ETDHLRIVGLIEIAAEFAVDVLKPGGAFVAKAFQGGETAEVIGKLKRHFTKVQHFKPKAS 218
Query: 188 RSASAEIYLLGIKYKA 203
R S+E++L+ +K
Sbjct: 219 RQDSSEVFLVATGFKG 234
>gi|46203098|ref|ZP_00208794.1| COG0293: 23S rRNA methylase [Magnetospirillum magnetotacticum MS-1]
Length = 251
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 109/198 (55%), Gaps = 4/198 (2%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y AK GYRSRA++KL+++D +F L+ ++DL AAPGGW QVA + V +
Sbjct: 52 DPYVARAKREGYRSRAAFKLIEIDERFKLLKPGQRIVDLGAAPGGWSQVAAKIVGENGCI 111
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL+ I P+ GA + D AR+ +++ G +A DLVL D + N G +
Sbjct: 112 VGIDLLEIEPMAGATFITLDFLDESAPARLHELL---GGKA-DLVLSDMAANTTGHKKTD 167
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ L + A + LAP G F+ KVF+ +L LK+ F V KPAASR+
Sbjct: 168 HLRTIGLAETAAAFAAEILAPGGAFLAKVFQGGTEGELLADLKRDFAVVRHVKPAASRAD 227
Query: 191 SAEIYLLGIKYKAPAKID 208
S+E+Y+L ++ A D
Sbjct: 228 SSELYVLATGFRGRAAGD 245
>gi|194900526|ref|XP_001979808.1| GG21940 [Drosophila erecta]
gi|190651511|gb|EDV48766.1| GG21940 [Drosophila erecta]
Length = 300
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 133/248 (53%), Gaps = 21/248 (8%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AK+ G+R+R+++KL+ +D + L +DLCAAPG W QV
Sbjct: 1 MGKTS-KDKRDIYYRQAKDEGWRARSAFKLLHVDEAYGILNGVQRAVDLCAAPGSWSQVL 59
Query: 61 VQRV---------PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRA 111
+++ ++ +DL +APIRG + L+ DITK ++ + ++ G
Sbjct: 60 SRKLYDACETDDEKAAVKIIAVDLQAMAPIRGILQLQGDITK---QSTAEAIISHFGGNE 116
Query: 112 -FDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLY 170
LV+ DG+P+V G + Q+ L++ ++ +AT L GTFV K+F+ S +
Sbjct: 117 KAQLVVCDGAPDVTGVHEMDEYMQHQLLVAALSIATCVLETGGTFVAKIFKGNATSLLSS 176
Query: 171 CLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLL-----DVKYLFQ--GSVE 223
++ F+K ++ KP +SR +S E +++ + P P+++ D++ L Q GS
Sbjct: 177 QMQIFFKKFDIYKPPSSRPSSIEAFVVCSGFCLPEGYIPQVINPARDDIRLLAQKTGSEV 236
Query: 224 PRKVVDVL 231
R++V +
Sbjct: 237 NRRLVPFI 244
>gi|149054554|gb|EDM06371.1| rCG34397 [Rattus norvegicus]
Length = 393
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 106/158 (67%), Gaps = 10/158 (6%)
Query: 648 KKQREQILDDAYNRYMFDDDG--LPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDAR 705
KK + ++D+++NRY F+++ LP+WF++EE++HR P+ K+E+ + +++EI+AR
Sbjct: 225 KKAKRDLIDNSFNRYAFNEEEEELPEWFVQEEKQHRIRQLPLDKKEVEHYRKRWREINAR 284
Query: 706 PAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKE 765
P KKVAEAKARKKR ++KLE+ +KKA + + DIS+R K Q+ LYK A + K++
Sbjct: 285 PIKKVAEAKARKKRRMLKKLEQTKKKAEAVVNTVDISEREKVAQLRSLYKKAGLGKEKRQ 344
Query: 766 --YVVAKKGV--QVRAGKGKV----LVDPRMKKDSRTH 795
YVVAKKGV +VR G +VD RMKKD R
Sbjct: 345 VTYVVAKKGVGRKVRRPAGVRGHFKVVDSRMKKDQRAQ 382
>gi|91976736|ref|YP_569395.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Rhodopseudomonas
palustris BisB5]
gi|123762792|sp|Q138J5.1|RLME_RHOPS RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|91683192|gb|ABE39494.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Rhodopseudomonas
palustris BisB5]
Length = 235
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 116/206 (56%), Gaps = 7/206 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV--PVG- 67
D Y AK GYRSRA++KL+++D K+ FL+S AV DL AAPGGW Q+A +RV P G
Sbjct: 33 DPYVAQAKRDGYRSRAAYKLLEIDDKYHFLKSGLAVADLGAAPGGWSQIAAKRVGAPDGR 92
Query: 68 SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAW 127
V+ +DL+ + I G + D R+++++ D+V+ D + N G
Sbjct: 93 GKVIAIDLLEMGEIPGVTFAQLDFLDDAAPDRLREMLGGGA----DVVMSDMAANTTGHR 148
Query: 128 AQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAAS 187
+ + LV + + A++ L P GTFV KVF+S ++++ LK+ F V+ KPAAS
Sbjct: 149 KTDQLRIVGLVESAAQFASEVLKPGGTFVAKVFQSGADATLMTQLKRDFATVKHVKPAAS 208
Query: 188 RSASAEIYLLGIKYKAPAKIDPRLLD 213
R S+E Y+L + ++ + P +D
Sbjct: 209 RKDSSERYVLAMGFRGVPIVAPETVD 234
>gi|195500126|ref|XP_002097241.1| GE24604 [Drosophila yakuba]
gi|194183342|gb|EDW96953.1| GE24604 [Drosophila yakuba]
Length = 302
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 130/247 (52%), Gaps = 19/247 (7%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AK+ G+R+R+++KL+ +D + L +DLCAAPG W QV
Sbjct: 1 MGKTS-KDKRDIYYRQAKDEGWRARSAFKLLHVDEAYGILNGVQRAVDLCAAPGSWSQVL 59
Query: 61 VQRV---------PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRA 111
+++ ++ +DL +APIRG + L+ DITK + + G
Sbjct: 60 SRKLYDACETDDEKAAVKIIAVDLQAMAPIRGILQLQGDITKQSTAEAI--IGHFGGNEK 117
Query: 112 FDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYC 171
LV+ DG+P+V G + Q+ L++ ++ +AT L GTFV K+F+ S +
Sbjct: 118 AQLVVCDGAPDVTGVHEMDEYMQHQLLVAALSIATCVLETGGTFVAKIFKGNATSLLSSQ 177
Query: 172 LKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLL-----DVKYLFQ--GSVEP 224
++ F+K ++ KP +SR +S E +++ + P P+++ D++ L Q GS
Sbjct: 178 MQIFFKKFDIYKPPSSRPSSIEAFVVCSDFCLPEGYIPQVINPARDDIRLLAQKTGSEVN 237
Query: 225 RKVVDVL 231
R++V +
Sbjct: 238 RRLVPFI 244
>gi|322368172|ref|ZP_08042741.1| ribosomal RNA large subunit methyltransferase J [Haladaptatus
paucihalophilus DX253]
gi|320552188|gb|EFW93833.1| ribosomal RNA large subunit methyltransferase J [Haladaptatus
paucihalophilus DX253]
Length = 254
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 105/199 (52%), Gaps = 6/199 (3%)
Query: 9 RLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGS 68
R D YY +K+ GYRSRA++KL QLD L V+DL AAPGGW+QVA + V
Sbjct: 3 RKDHYYNKSKQQGYRSRAAYKLKQLDESAHLLHEGETVVDLGAAPGGWLQVAAEEVGDTG 62
Query: 69 LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWA 128
V+G+DL I I G ++ D+T+ E + V V + D+VL D +PN+ G ++
Sbjct: 63 TVIGVDLQRIKDIDGVETIRGDMTEEETQEEVIDV-----AGSADVVLSDMAPNMTGEYS 117
Query: 129 QEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASR 188
+ L + + A + L G FV KVF+ D + ++ FE V P ASR
Sbjct: 118 LDHARSVYLARQAFETALELLDSGGDFVVKVFQGPDLDDLREDMEPEFEYVRTMSPDASR 177
Query: 189 SASAEIYLLGIK-YKAPAK 206
S+E+YL+ K AP +
Sbjct: 178 DESSEVYLVARKRLTAPVR 196
>gi|296484247|tpg|DAA26362.1| TPA: FtsJ homolog 1-like [Bos taurus]
Length = 327
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 121/218 (55%), Gaps = 11/218 (5%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV-P 65
K + D YYRLAKE G+R+R+++KL+QLD +F + +DLCAAPG W QV Q++
Sbjct: 6 KDKRDVYYRLAKEKGWRARSAFKLLQLDEEFQLFQGVTRAIDLCAAPGSWSQVLSQKIGG 65
Query: 66 VGS-LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVG 124
GS V+ +DL +AP+ G + ++ DIT+ + K++++ DLV+ DG+P+V
Sbjct: 66 QGSGHVVAVDLQAMAPLPGVLQIQGDITQ---LSTAKEIIQHFEDCPTDLVVCDGAPDVT 122
Query: 125 GAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKP 184
G + +Q L ++ + L P G FV K+FR +D + + L+ F +V KP
Sbjct: 123 GLHVEYMQAQLLLAALNLAM--HVLKPGGCFVGKIFRGRDVTLIYSQLRVFFSRVLCAKP 180
Query: 185 AASRSASAEIYLLGIKYKAPAKIDP----RLLDVKYLF 218
+SR++S E + + Y P P LLD Y F
Sbjct: 181 RSSRNSSIEAFAVCKGYNPPEGFLPDLTKPLLDHSYDF 218
>gi|195498417|ref|XP_002096514.1| GE25011 [Drosophila yakuba]
gi|194182615|gb|EDW96226.1| GE25011 [Drosophila yakuba]
Length = 318
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 121/217 (55%), Gaps = 12/217 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D +YRLAKE G+R+R+++KL+Q + F L +DLCAAPG W QV
Sbjct: 1 MGRT-SKDKRDIFYRLAKEQGWRARSAFKLLQAEETFQLLDGLTRAVDLCAAPGSWSQVL 59
Query: 61 VQRV--PVGS------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAF 112
+R+ P+ ++ +DL +A I G L DI+K + + ++E G
Sbjct: 60 AKRMYDPLPPEERERVKIIAVDLQGMASIEGVTQLRADISK---ESTAEAIIEFFGGEKA 116
Query: 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCL 172
+V+ DG+P+ G ++ Q L++ ++ ++T L G+FV+K++R+ S + L
Sbjct: 117 QIVVSDGAPDSTGMHDFDSYVQGELLLSALSISTFILEEGGSFVSKIYRADKTSRLYTQL 176
Query: 173 KQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDP 209
K+ F+ V V KP+ASR++S E +++ K+ P P
Sbjct: 177 KRFFKDVCVFKPSASRNSSIEAFVVAQKFCLPEGYKP 213
>gi|195060807|ref|XP_001995863.1| GH14141 [Drosophila grimshawi]
gi|193891655|gb|EDV90521.1| GH14141 [Drosophila grimshawi]
Length = 311
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 121/225 (53%), Gaps = 16/225 (7%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+ + +FS +DLCAAPG W QV
Sbjct: 1 MGKTS-KDKRDVYYRQAKEEGWRARSAFKLLHIHEQFSIFDGVQRAVDLCAAPGSWSQVL 59
Query: 61 VQRV---------PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGV-- 109
+++ + ++ +DL +API G + ++ DIT+ + + ++ G
Sbjct: 60 SRKLFEPCQTDDEKLAVKIIAVDLQAMAPIPGVLQIQGDITQ---ESTAEAIIAHFGSGD 116
Query: 110 -RAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSV 168
+ LV+ DG+P+V G + QN L++ ++ LAT L P G FV K+F + +
Sbjct: 117 DQKAQLVVCDGAPDVTGFHEMDEYMQNQLIVSALSLATCVLEPGGKFVAKIFNVTENDLL 176
Query: 169 LYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLD 213
++ F+ + KP +SR +S E +++ ++ PA P++++
Sbjct: 177 ETQMRTFFKHFHIYKPPSSRPSSYEAFVVCSDFRLPAGYIPQIIN 221
>gi|292493675|ref|YP_003529114.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Nitrosococcus halophilus
Nc4]
gi|291582270|gb|ADE16727.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Nitrosococcus halophilus
Nc4]
Length = 212
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 107/191 (56%), Gaps = 3/191 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y AK GYRSRA +KL ++D++ LR S V+DL AAPGGW Q A+++V
Sbjct: 14 EHFRDPYVTKAKAQGYRSRAVFKLQEIDTRERLLRPSMVVVDLGAAPGGWSQWAIEQVGA 73
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ LD++P+ P G ++ D + A ++ + R DLV+ D +PN+ G
Sbjct: 74 QGQVIALDILPMVPPAGVQFIQGDFCEDNVLAELQNTLAG---RVVDLVMSDMAPNMSGM 130
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
A + L ++ A + L P+G+F+ K F+ + + ++ ++Q F V + KP+A
Sbjct: 131 AAVDQPRAIYLGELALAFAQEHLGPEGSFLLKTFQGEGFEALYEAIRQEFSGVRIKKPSA 190
Query: 187 SRSASAEIYLL 197
SR S E+Y++
Sbjct: 191 SRGRSREVYIV 201
>gi|24647580|ref|NP_650590.1| CG5220 [Drosophila melanogaster]
gi|9910870|sp|Q9VEP1.1|RMJ1A_DROME RecName: Full=Putative ribosomal RNA methyltransferase CG5220;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|7300216|gb|AAF55380.1| CG5220 [Drosophila melanogaster]
gi|25012244|gb|AAN71236.1| LD21957p [Drosophila melanogaster]
gi|220943874|gb|ACL84480.1| CG5220-PA [synthetic construct]
gi|220953752|gb|ACL89419.1| CG5220-PA [synthetic construct]
Length = 302
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 130/247 (52%), Gaps = 19/247 (7%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AK+ G+R+R+++KL+ +D + L +DLCAAPG W QV
Sbjct: 1 MGKTS-KDKRDIYYRQAKDEGWRARSAFKLLHVDEAYGILNGVQRAVDLCAAPGSWSQVL 59
Query: 61 VQRV---------PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRA 111
+++ ++ +DL +APIRG + L+ DITK + + G
Sbjct: 60 SRKLYDTCETDDEKSAVKIIAVDLQAMAPIRGILQLQGDITKQSTAEAI--IGHFGGNEK 117
Query: 112 FDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYC 171
LV+ DG+P+V G + Q+ L++ ++ +AT L GTFV K+F+ S +
Sbjct: 118 AQLVVCDGAPDVTGVHEMDEYMQHQLLVAALSIATCVLETGGTFVAKIFKGNATSLLSSQ 177
Query: 172 LKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLL-----DVKYLFQ--GSVEP 224
++ F+K ++ KP +SR +S E +++ + P P+++ D++ L Q GS
Sbjct: 178 MQIFFKKFDIYKPPSSRPSSIEAFVVCSDFCLPEGYIPQVINPARDDIRLLAQKTGSEVN 237
Query: 225 RKVVDVL 231
R++V +
Sbjct: 238 RRLVPFI 244
>gi|432115993|gb|ELK37132.1| Putative ribosomal RNA methyltransferase 1 [Myotis davidii]
Length = 315
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 120/214 (56%), Gaps = 7/214 (3%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE+G+R+R+++KL+QL+ +F +DLCAAPG W QV
Sbjct: 1 MGRTS-KDKRDVYYRLAKENGWRARSAFKLLQLNEEFRLFEGVTRAVDLCAAPGSWSQVL 59
Query: 61 VQRV--PVGS-LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117
Q++ P GS V+ +DL +AP+ G + ++ DIT+ + + E G A DLV+
Sbjct: 60 SQKIGSPQGSGHVVAVDLQAMAPLPGVLQIQGDITQLSTAEDIFRHFE--GCPA-DLVVC 116
Query: 118 DGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFE 177
DG+P+V G + Q L++ ++ +A L P G FV K+FR +D + + L F
Sbjct: 117 DGAPDVTGLHEVDEYLQAQLLLAALNIAAHVLKPGGCFVAKIFRGRDMTLIYSQLHVFFS 176
Query: 178 KVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
V KP++SR AS E + + Y P P L
Sbjct: 177 SVLCAKPSSSRKASREAFAVCQGYDPPEGFLPDL 210
>gi|422350578|ref|ZP_16431462.1| 23S rRNA (uridine(2552)-2'-O-)-methyltransferase [Sutterella
wadsworthensis 2_1_59BFAA]
gi|404657181|gb|EKB30084.1| 23S rRNA (uridine(2552)-2'-O-)-methyltransferase [Sutterella
wadsworthensis 2_1_59BFAA]
Length = 217
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 113/205 (55%), Gaps = 9/205 (4%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP- 65
+H D + + +K GYR+R+ +KL +LD + LR V++L AAPG W Q+ +R+
Sbjct: 17 RHINDPFVKRSKAEGYRARSVYKLTELDDREHLLRRGMTVVELGAAPGSWTQIVRERLSD 76
Query: 66 ----VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
V ++ +D++P+ PI G L+ D + E ++ ++++ V D+VL D +P
Sbjct: 77 KDGRVQGRIIAMDILPMDPIDGVTFLQGDFREQEIADKLAEILDGDKV---DVVLSDMAP 133
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
N+ G A +A L + + + L P G FVTK F+ +S + LK+ F+KV
Sbjct: 134 NLSGIAAADAARSLLLNELAHEFCLEHLKPNGVFVTKSFQGSGFSQFVEALKKTFKKVYT 193
Query: 182 DKPAASRSASAEIYLLGIKYKAPAK 206
KPAASR SAE+YL+ + K P K
Sbjct: 194 RKPAASRDTSAEVYLVARELK-PGK 217
>gi|390604798|gb|EIN14189.1| hypothetical protein PUNSTDRAFT_129823 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 873
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 164/292 (56%), Gaps = 42/292 (14%)
Query: 525 LMVPLDDGIRPTQEEITNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKAK 584
L+ L++ +P++ T WFSQ++FA D+ + +++TQ+ A+ PE+
Sbjct: 588 LLTTLEEPAQPSR--TTQLWFSQDMFAGVDGLDDMDEDEPDEDTQMGSLAD--PTPEEQ- 642
Query: 585 QKMANDAAGPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVD----------- 633
++A P S+ DFE+VP DS D+ + DE+ D
Sbjct: 643 ----SEAETP-------SDDGDDFEVVPQ---DSDADAVMWDVNDEDQDEAKRVQIRKHG 688
Query: 634 -TKAEILACAKKML-RKKQREQILDDAYNRYMFDD-DGLPDWFLEEERRHRQAIRPVTKE 690
T AE + A++++ R+K + Q+++D +NRY + + LP WFL++E +H + PVTKE
Sbjct: 689 LTTAEAMTLAQQLVNREKTKTQLINDGFNRYSLNSKEDLPSWFLDDESKHYKPNIPVTKE 748
Query: 691 EIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQI 750
I A++A+ + +DARP KKVAEAK RKK A ++LEK KKA +++ +D+++R K +QI
Sbjct: 749 AIRALRAKMRALDARPIKKVAEAKGRKKLRAAQRLEKAMKKAQGVTEASDMTEREKAQQI 808
Query: 751 EQLYKSAVPKRPKKEYVV------AKKGVQVR--AGKGK-VLVDPRMKKDSR 793
E+L + + KK+ + KG++ R KG+ V+VD RMKK+ R
Sbjct: 809 EKLMRKGLSSGKKKKETKVVVAKGSHKGIKGRPKGVKGRYVMVDSRMKKEVR 860
>gi|343425309|emb|CBQ68845.1| probable SPB1-required for ribosome synthesis, putative methylase
[Sporisorium reilianum SRZ2]
Length = 915
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 121/186 (65%), Gaps = 14/186 (7%)
Query: 636 AEILACAKKML-RKKQREQILDDAYNRYMF-DDDGLPDWFLEEERRHRQAIRPVTKEEIA 693
AE +A A+ ++ RK +E ++D ++++ F D DGLP WFL++E++H +A P+TKE +
Sbjct: 717 AEAVALAQALVNRKITKEDLMDQGFSKHSFVDKDGLPTWFLDDEQKHYKANIPITKEAVQ 776
Query: 694 AMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQL 753
A++ + + +DARP KK+AEAKARKK A+R+LEK ++KA I++ DI+++ K I +L
Sbjct: 777 ALRDRQRALDARPIKKIAEAKARKKMRALRRLEKAQQKAETINENEDITEKEKSNTINKL 836
Query: 754 Y-KSAVPKRPKKEY-VVAKKGVQVRAGKGKV--------LVDPRMKKDSRTHGSGKARKG 803
KSA + KKE +V KGV R KG+ +VDPRMKK+ R + KA++
Sbjct: 837 LAKSAKGGQKKKEVQLVVAKGVN-RGLKGRPKGTKGRYKMVDPRMKKELRANKR-KAKRD 894
Query: 804 GSKKGN 809
G K G+
Sbjct: 895 GKKIGS 900
>gi|323450630|gb|EGB06510.1| hypothetical protein AURANDRAFT_5019, partial [Aureococcus
anophagefferens]
Length = 180
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 107/184 (58%), Gaps = 4/184 (2%)
Query: 14 YRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGL 73
YR AKE +R+R+++KL+ +D +F L ++ V+DLCAAPG W QV +R P G+ V+ +
Sbjct: 1 YRKAKEEKFRARSAYKLMDVDDEFHLLANAARVVDLCAAPGSWCQVLRRRCPAGAAVVAV 60
Query: 74 DLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMS 133
DL P+AP+ G V L DIT PE + D+V+ DG+P V G + +
Sbjct: 61 DLQPMAPLDGVVVLRGDITTPE----TAAAVVAAAGGPADVVVCDGAPEVTGVHDVDEFA 116
Query: 134 QNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASAE 193
+L+ + LA + L P G FV K+FR D + V L+ LF V+V KPA+SR S E
Sbjct: 117 HASLMAAAAALAARLLRPGGAFVAKLFRCTDAALVEAQLRCLFVDVDVRKPASSRDRSVE 176
Query: 194 IYLL 197
+++
Sbjct: 177 AFVV 180
>gi|395005246|ref|ZP_10389138.1| 23S rRNA methylase [Acidovorax sp. CF316]
gi|394316826|gb|EJE53527.1| 23S rRNA methylase [Acidovorax sp. CF316]
Length = 217
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 112/203 (55%), Gaps = 11/203 (5%)
Query: 8 HRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV-PV 66
H D Y +LA++ G+R+RA++KL ++D + ++ + V+DL + PG W Q +R+ P
Sbjct: 18 HVNDTYVKLAQKEGFRARAAYKLKEIDEQLHLIKPGNTVVDLGSTPGAWSQYVRRRLSPS 77
Query: 67 GSL-------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDG 119
G+ ++ LD++P+ PI G L D + A+++ +E R D+V+ D
Sbjct: 78 GAATGQLNGNIIALDILPMEPIEGVTFLNGDFREESVLAQLEAALEG---RVVDVVVSDM 134
Query: 120 SPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKV 179
+PN+ G + +A + LV +V AT L P G V K+F YS ++ KQ F+ V
Sbjct: 135 APNLSGIESADAARISHLVELAVDFATAHLKPDGALVVKLFHGSGYSDLVTLFKQTFKVV 194
Query: 180 EVDKPAASRSASAEIYLLGIKYK 202
+ KP ASR S+E +L+G+ K
Sbjct: 195 KPVKPKASRDKSSETFLVGMGLK 217
>gi|390165494|ref|ZP_10217822.1| 23S rRNA methyltransferase J [Sphingobium indicum B90A]
gi|389591669|gb|EIM69589.1| 23S rRNA methyltransferase J [Sphingobium indicum B90A]
Length = 195
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 104/192 (54%), Gaps = 5/192 (2%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y R AK G+RSRA++KL++LD KF FL+ S AV+DL APGGW QV + P V
Sbjct: 3 DPYVRRAKAEGWRSRAAFKLIELDEKFHFLKGSRAVVDLGVAPGGWAQVVRKLCPKAK-V 61
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL+P PI G + D + A + + + + A DLV+ D + N G A +
Sbjct: 62 VGIDLLPTDPIPGVALFQMDFMDDKAPALLAEALGD----APDLVISDMAANTVGHAATD 117
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ LV + A + L GTFV KVF + +L LK+ F ++ KP ASR
Sbjct: 118 HLRTMGLVEAAAMFAVENLRKGGTFVAKVFAGGTDADLLAILKRHFTTIKHAKPPASRKG 177
Query: 191 SAEIYLLGIKYK 202
S E Y++ +K
Sbjct: 178 SVEWYVVAQGFK 189
>gi|92115197|ref|YP_575125.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Chromohalobacter
salexigens DSM 3043]
gi|122419130|sp|Q1QSY2.1|RLME_CHRSD RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|91798287|gb|ABE60426.1| 23S rRNA Um-2552 2'-O-methyltransferase [Chromohalobacter
salexigens DSM 3043]
Length = 210
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 111/191 (58%), Gaps = 3/191 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D+Y + + + GYRSRAS+KL++LD+K + L+ V+DL AAPGGW Q+A +V
Sbjct: 17 EHFDDRYVQRSWQDGYRSRASYKLLELDAKDALLKPGMTVIDLGAAPGGWSQIAADKVGD 76
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ D++ + + G ++ D T+ E ++ +E R DLV+ D +PN+ G
Sbjct: 77 KGCVIASDILEMDALAGVTFVQGDFTEMEVLEQILVALEG---RRVDLVMSDMAPNMSGM 133
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
A + LV ++ LA Q L+P G F+ KVF+ + + + L L+ F KV KP A
Sbjct: 134 AAIDQPQAMYLVELALDLARQTLSPGGRFLAKVFQGEGFDAYLKELRGSFRKVVTRKPEA 193
Query: 187 SRSASAEIYLL 197
SR+ S E+YLL
Sbjct: 194 SRARSREVYLL 204
>gi|197104878|ref|YP_002130255.1| cell division protein FtsJ [Phenylobacterium zucineum HLK1]
gi|196478298|gb|ACG77826.1| cell division protein FtsJ [Phenylobacterium zucineum HLK1]
Length = 239
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 109/199 (54%), Gaps = 11/199 (5%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSL- 69
D + A+ GYRSRA++K+ ++D +F R V+DL APGGW QVA+QR G
Sbjct: 47 DPFAAKARALGYRSRAAFKISEIDDRFHLFRKGVRVVDLGLAPGGWTQVAIQR---GVTD 103
Query: 70 VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQ 129
++G+DL+P+ P+ A L+ D T P C ++ +++ D+V+ D +PN G
Sbjct: 104 IVGVDLLPVEPLPPAHILQMDFTDPACGPKLIELLGGPP----DVVISDMAPNTIGHRET 159
Query: 130 EAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRS 189
+ + L+ ++ A + L P GTFV K F+ ++ LK F+ V KP ASR
Sbjct: 160 DHLRIVGLIEAAIDFAVEVLKPGGTFVAKAFQGGGTDQIIAGLKTRFKDVRNIKPKASRQ 219
Query: 190 ASAEIYLLGIKYK---APA 205
S+E++L+ +K APA
Sbjct: 220 DSSEVFLVATGFKGRAAPA 238
>gi|372489670|ref|YP_005029235.1| 23S rRNA methylase [Dechlorosoma suillum PS]
gi|359356223|gb|AEV27394.1| 23S rRNA methylase [Dechlorosoma suillum PS]
Length = 210
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 105/196 (53%), Gaps = 3/196 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D + AK G+RSRAS+KL+++D K L+ V+DL AAPGGW QVAVQRV
Sbjct: 13 EHVNDHFVHRAKAEGWRSRASFKLLEIDDKDKLLKPGEVVVDLGAAPGGWCQVAVQRVGE 72
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
G V +DL+ + I G ++ D + +++ R LVL D +PN+ G
Sbjct: 73 GGKVFAIDLLEMQGIAGVDFMQGDFREESV---LREFESRLAGRQVGLVLSDMAPNISGV 129
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ L +++ A + L P G F+ KVF+ ++ L +++ FE V KP +
Sbjct: 130 NVSDQARSIYLCELALEFAREHLKPDGAFLVKVFQGSGFNEFLAAMRETFEVVATRKPKS 189
Query: 187 SRSASAEIYLLGIKYK 202
SR S E+YLLG + K
Sbjct: 190 SRDRSPELYLLGRRLK 205
>gi|355572364|ref|ZP_09043508.1| Ribosomal RNA large subunit methyltransferase E [Methanolinea tarda
NOBI-1]
gi|354824738|gb|EHF08980.1| Ribosomal RNA large subunit methyltransferase E [Methanolinea tarda
NOBI-1]
Length = 202
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 104/197 (52%), Gaps = 10/197 (5%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG G+ D Y A GYRSRA++KL ++ +F +R + VLDL AAPG W+QV
Sbjct: 1 MGSQWGR---DSAYVRAIREGYRSRAAYKLKEIQERFHLIRDTDNVLDLGAAPGSWLQVT 57
Query: 61 VQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
R VLG+DL PIAP+ G +L DIT P R + ++ ++VL D S
Sbjct: 58 --RSITKGRVLGIDLAPIAPLEGVTTLVGDITDPRMRMEARSILG-----TVNIVLSDAS 110
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
P + G + + L D + A L P G + K F+ +D+S +L ++Q F V+
Sbjct: 111 PKLSGNRSYDQARAIGLGEDVLSFACAVLKPGGNLLMKSFQGEDFSGLLDDVRQHFLSVK 170
Query: 181 VDKPAASRSASAEIYLL 197
+ ASR S+EIY++
Sbjct: 171 TFRSRASRKGSSEIYII 187
>gi|406979651|gb|EKE01397.1| ribosomal RNA large subunit methyltransferase J [uncultured
bacterium]
Length = 209
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 111/199 (55%), Gaps = 3/199 (1%)
Query: 8 HRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVG 67
H D Y + AK+ G+R+R+ +KL ++ ++ ++ + V+DL AAPGGW + AVQ V
Sbjct: 14 HFSDIYVKKAKQEGFRARSVYKLSEIQERYKIIKPNMFVVDLGAAPGGWSEYAVQLVAPK 73
Query: 68 SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAW 127
+ LD++P+ PI+G ++ D T+ + VK + D+VL D +PN+ G
Sbjct: 74 GKIFALDILPMQPIKGVDFIQGDFTQDDV---VKDLHARLNGEKIDVVLSDMAPNLSGLS 130
Query: 128 AQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAAS 187
+ LV ++ A + L P G F+TK+F+ + + + L+ F +V+V KP AS
Sbjct: 131 VVDQSRSINLVEIALAFAQKGLKPGGVFLTKIFQGAGFENFVKNLRHSFGEVKVIKPDAS 190
Query: 188 RSASAEIYLLGIKYKAPAK 206
R+ S EI+LL + AP K
Sbjct: 191 RARSKEIFLLARDFGAPKK 209
>gi|222478870|ref|YP_002565107.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Halorubrum lacusprofundi
ATCC 49239]
gi|254809555|sp|B9LSX2.1|RLME_HALLT RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|222451772|gb|ACM56037.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Halorubrum lacusprofundi
ATCC 49239]
Length = 269
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 107/189 (56%), Gaps = 5/189 (2%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D+YY +K+ GYR+R+++KL Q+D + + V+DL AAPGGW+QVA + V V
Sbjct: 5 DEYYNKSKQQGYRARSAYKLKQIDEEANLFERGDTVVDLGAAPGGWLQVAAEEVGESGTV 64
Query: 71 LGLDLVPIAPI--RGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWA 128
+G+DL I + ++ D+T+ R +++ + E G D+V+ D +PN+ G +A
Sbjct: 65 VGVDLQRIDDLDDHDVETIRGDMTEERTRHYLREAIGERGA---DVVISDMAPNMTGEYA 121
Query: 129 QEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASR 188
+ L + +A + LAP G FV KVF+ +D + ++ FE + P ASR
Sbjct: 122 LDHARSVHLARQAFDVAEELLAPGGDFVVKVFQGEDLDAFREDVRAEFEYLRTVSPPASR 181
Query: 189 SASAEIYLL 197
+S+E+YL+
Sbjct: 182 DSSSEVYLV 190
>gi|261400135|ref|ZP_05986260.1| ribosomal RNA large subunit methyltransferase J [Neisseria
lactamica ATCC 23970]
gi|269210130|gb|EEZ76585.1| ribosomal RNA large subunit methyltransferase J [Neisseria
lactamica ATCC 23970]
Length = 206
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 107/192 (55%), Gaps = 3/192 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y +A++ GYR+RA++KL++++ K ++ + DL +APG W QVA +
Sbjct: 14 EHVNDHYVHMAQKDGYRARAAYKLLEINEKDKLIKPGTVLADLGSAPGSWSQVAAKLTGT 73
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V LD++P+ PI G ++ D + + A+ + ++ R DLV+ D +PN+ G
Sbjct: 74 SGAVFALDILPMEPIGGVSFIQGDFRENDVLAQFEGLLNN---RPLDLVICDMAPNMSGN 130
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ L ++ A+Q L G+F+ KVF+ Y + ++++F V+ KP A
Sbjct: 131 AVSDQARSFYLCELALDFASQHLKTGGSFLVKVFQGAGYQEYMAAMREIFGTVQTRKPEA 190
Query: 187 SRSASAEIYLLG 198
SR+ S+EIYLLG
Sbjct: 191 SRNRSSEIYLLG 202
>gi|49473815|ref|YP_031857.1| cell division protein ftsJ [Bartonella quintana str. Toulouse]
gi|81647276|sp|Q6G0S9.1|RLME_BARQU RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|49239318|emb|CAF25648.1| Cell division protein ftsJ [Bartonella quintana str. Toulouse]
Length = 241
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 115/206 (55%), Gaps = 11/206 (5%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y +K GYRSRA++KL++++ ++ FL+ ++DL AAPGGW QVA QR+ V
Sbjct: 41 RHLNDPYVHQSKVDGYRSRAAYKLIEMNERYKFLKKGQKIIDLGAAPGGWCQVA-QRI-V 98
Query: 67 GS-----LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
GS V+G+D +P+ P+ G + LE D + +K+++ G + D+VL D +
Sbjct: 99 GSSDEKPSVVGIDYLPVVPLPGVIMLEMDFLHTDAP---QKLIDALGTKP-DVVLSDMAA 154
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
G + + L + A L G F+ K F+ +++L LKQ F+ V
Sbjct: 155 PTTGHRQTDYLRTTYLCEVAADFALSVLKSGGHFLVKAFQGGAENTLLTTLKQNFKTVHH 214
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKI 207
KP ASR+ S E+YLL +++KA ++
Sbjct: 215 VKPPASRTESVELYLLALEFKAKTEV 240
>gi|317142766|ref|XP_001819081.2| transfer RNA methyltransferase [Aspergillus oryzae RIB40]
Length = 393
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 122/235 (51%), Gaps = 32/235 (13%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHA-----VLDLCAAPGG 55
MGK K + D YYRLAKE +R+R+++KL+Q+D +F + V+DLCAAPG
Sbjct: 1 MGK-SSKDKRDAYYRLAKEQNWRARSAFKLIQIDEQFDLFEHENPEKVTRVVDLCAAPGS 59
Query: 56 WMQVAVQRVPV------------GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKV 103
W QV + RV + ++ +DL P+AP+ G +L+ DIT P + +
Sbjct: 60 WSQV-LSRVLIKDAAMEELKPRKNVKIVSIDLQPMAPLEGITTLKADITHPSTIPLLLRA 118
Query: 104 MEEHGV-------------RAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLA 150
++ DLV+ DG+P+V G + Q+ L+ ++ LA L
Sbjct: 119 LDPEAYDSTTSSPSSLRQPHPVDLVISDGAPDVTGLHDLDIYIQSQLLYAALNLALGVLR 178
Query: 151 PKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPA 205
P G FV K+FR +D + L+ +FEKV V KP +SR++S E +++ + P+
Sbjct: 179 PGGKFVAKIFRGRDVDLIYAQLRTVFEKVSVAKPRSSRASSLEAFVVCEGFIPPS 233
>gi|296476235|tpg|DAA18350.1| TPA: putative rRNA methyltransferase 3 [Bos taurus]
Length = 809
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 112/185 (60%), Gaps = 21/185 (11%)
Query: 593 GPKSTHNQVSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQRE 652
GPKS E + FE+VP +D D E ++A +KK R
Sbjct: 627 GPKS------EDDDGFEVVPI------EDPVKHRILDPEGLALGALIASSKKAKR----- 669
Query: 653 QILDDAYNRYMFDDDG--LPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKV 710
++DD+++RY F++D LPDWF++EE++HR PV K+E+ + +++EI+ARP KKV
Sbjct: 670 DLIDDSFSRYTFNEDEGELPDWFVQEEKQHRIRQLPVDKKEVEHYRKRWREINARPIKKV 729
Query: 711 AEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKE--YVV 768
AEAKARKKR ++KLE+ +KKA + + DIS+R K Q+ LY+ A + K++ YVV
Sbjct: 730 AEAKARKKRRMLKKLEQTKKKAEAVVNTVDISEREKVAQLRSLYRKAGLGKEKRQVTYVV 789
Query: 769 AKKGV 773
AKKGV
Sbjct: 790 AKKGV 794
>gi|448732348|ref|ZP_21714629.1| 23S rRNA methyltransferase J [Halococcus salifodinae DSM 8989]
gi|445804921|gb|EMA55151.1| 23S rRNA methyltransferase J [Halococcus salifodinae DSM 8989]
Length = 251
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 108/202 (53%), Gaps = 7/202 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D+YY AK+ GYRSR+++KL Q+D + S V+DL AAPGGW+QVA +R G V
Sbjct: 5 DEYYNKAKQQGYRSRSAYKLQQIDDTADLIAPSDTVIDLGAAPGGWLQVAAERAD-GGRV 63
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+D I I G ++ D+T+ +A + + V DLVL D +PN+ G + +
Sbjct: 64 VGVDRQRIESIDGVETVRGDLTEESTQAEIAER-----VGKADLVLSDMAPNMTGEYELD 118
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
L ++ +A L P G V K F +D + ++ FE V +P ASR
Sbjct: 119 HARSIHLARQALDVARTILTPGGDLVVKAFDGRDLDDLEADIEDEFEYVRTVRPDASRDE 178
Query: 191 SAEIYLLG-IKYKAPAKIDPRL 211
S+E++L+G + AP +D L
Sbjct: 179 SSELFLVGKGRMTAPVAVDDEL 200
>gi|303256870|ref|ZP_07342884.1| ribosomal RNA large subunit methyltransferase J [Burkholderiales
bacterium 1_1_47]
gi|330998881|ref|ZP_08322608.1| ribosomal RNA large subunit methyltransferase J [Parasutterella
excrementihominis YIT 11859]
gi|302860361|gb|EFL83438.1| ribosomal RNA large subunit methyltransferase J [Burkholderiales
bacterium 1_1_47]
gi|329576095|gb|EGG57614.1| ribosomal RNA large subunit methyltransferase J [Parasutterella
excrementihominis YIT 11859]
Length = 214
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 113/200 (56%), Gaps = 14/200 (7%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP- 65
+H D + + + + GYR+R+ +KL+++D K ++ +V+DL AAPG W Q+ +R+
Sbjct: 17 RHLTDPFVKKSVQEGYRARSVYKLMEIDDKDKIIKPGMSVVDLGAAPGSWTQIVKERLTD 76
Query: 66 ----VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ V+ +D++P+ PI G L+ D + E ++ ++E V D+VL D +P
Sbjct: 77 KDGKIDGKVIAMDILPMEPIEGVHFLQGDFREQEVADKLTDLLEGEKV---DVVLSDMAP 133
Query: 122 NVGGAWAQEA---MSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
N+ G A +A + N L +D A + L G+FV KVF+ YS + K+ F K
Sbjct: 134 NLSGVAAADAARCLLLNELALD---FAKENLKKNGSFVCKVFQGSGYSQYVEACKKTFRK 190
Query: 179 VEVDKPAASRSASAEIYLLG 198
V V KP ASRS+SAE+Y++
Sbjct: 191 VSVRKPEASRSSSAEVYIVA 210
>gi|388855633|emb|CCF50856.1| probable SPB1-required for ribosome synthesis, putative methylase
[Ustilago hordei]
Length = 928
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 137/241 (56%), Gaps = 27/241 (11%)
Query: 603 EVEGDFEIVPAPGADSS--DDSSSDESEDEEVDTK----------AEILACAKKML-RKK 649
E E DFE+V + + DD + ED+E + AE ++ A+ ++ RK
Sbjct: 685 EQENDFEVVLQDQEEDAIPDDEWDLDGEDQEAGKQKRIQDHGLATAEAVSLAQALVNRKI 744
Query: 650 QREQILDDAYNRYMF-DDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAK 708
+E ++D +++ F D DGLP WFL++E+++ +A P+TKE + A++ + + +DARP K
Sbjct: 745 TKEDLMDQGFSKNNFVDKDGLPTWFLDDEQKYYKANIPITKEAVQALRERQRALDARPIK 804
Query: 709 KVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKEYV- 767
KVAEAKARKK +R+LEK +KKA I++ DIS++ K I +L +V KK+ V
Sbjct: 805 KVAEAKARKKMRTLRRLEKAQKKAETINENEDISEKEKSSTINKLLSKSVKGGQKKKEVQ 864
Query: 768 -VAKKGVQVRAGKGKV--------LVDPRMKKDSRTHGSGKARKGGSKKGNIG-KARKGK 817
V KGV R KG+ +VDPRMKK+ R KA++ G K G+ K R K
Sbjct: 865 LVVAKGVN-RGLKGRPKGTKGRYKMVDPRMKKELRAFKR-KAKRDGKKLGSSNHKPRAAK 922
Query: 818 G 818
G
Sbjct: 923 G 923
>gi|348504914|ref|XP_003440006.1| PREDICTED: putative rRNA methyltransferase 3-like [Oreochromis
niloticus]
Length = 816
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/282 (35%), Positives = 145/282 (51%), Gaps = 55/282 (19%)
Query: 544 WFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEK-------------HSIPEKAKQKMAND 590
WFS+ IF+E GD + E KQ+ K E + K A
Sbjct: 522 WFSKGIFSEIGLEGDAESELKQTEWLRTKQSGKGKKRKAEEDIEEEEEEQEITRMKQARG 581
Query: 591 AAGPKSTHNQVS-EVE--GDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILA------C 641
A G VS EVE DF++VP E KA IL+
Sbjct: 582 AGG-------VSVEVEDDNDFQVVPV----------------ESTSKKARILSPEGLALG 618
Query: 642 AKKMLRKKQREQILDDAYNRYMFDDDG--LPDWFLEEERRHRQAIRPVTKEEIAAMKAQF 699
A+ KK+ ++D +++R+ D+ +P+WFL++ER+HR+ PVTKE + K ++
Sbjct: 619 AQIATSKKRARDLVDSSFHRFATSDEPWEVPEWFLDDERKHRKRPVPVTKEMVEEYKQKW 678
Query: 700 KEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVP 759
KEI+ARP K+VAEAKARKKR ++K+E+ +KKA + + DIS+R K Q++ +YK A
Sbjct: 679 KEINARPIKRVAEAKARKKRRTLKKMEQAKKKAEAVVNTVDISEREKMAQLKSIYKKAGL 738
Query: 760 KRPKKE--YVVAKKGV--QVRAGKGK----VLVDPRMKKDSR 793
+ K+E YVV+KKG +VR G +VD RMKKD R
Sbjct: 739 GKEKREVTYVVSKKGAGKKVRRPPGVKGVFKVVDGRMKKDLR 780
>gi|255954021|ref|XP_002567763.1| Pc21g07220 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589474|emb|CAP95619.1| Pc21g07220 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 838
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/168 (44%), Positives = 110/168 (65%), Gaps = 10/168 (5%)
Query: 636 AEILACAKKMLR-KKQREQILDDAYNRYMFDD-DGLPDWFLEEERRHRQAIRPVTKEEIA 693
AE +A A+ M +K+ I+DD +NR+ F D DGLP+WFL++E +H + +RPVTK A
Sbjct: 659 AEAMALAQSMATGEKKSTDIVDDGFNRFAFRDVDGLPEWFLDDEGKHSKPVRPVTKAAAA 718
Query: 694 AMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQL 753
A++ + + I+ARP KKV EA+ RKK A ++LEK+RKK+ ++++ +S+R K I +L
Sbjct: 719 AIREKLRAINARPIKKVMEAQGRKKYKAAQRLEKLRKKSALLAEDDALSERDKAGAIARL 778
Query: 754 YKSAVPKRPKKE--YVVAK---KGVQVR--AGKGKV-LVDPRMKKDSR 793
A K+PK+E VVAK +G+ R KGK +VD RMKKD R
Sbjct: 779 MSRATKKKPKQEVKLVVAKGPNRGISGRPKGVKGKYKIVDARMKKDVR 826
>gi|332530812|ref|ZP_08406738.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Hylemonella gracilis
ATCC 19624]
gi|332039724|gb|EGI76124.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Hylemonella gracilis
ATCC 19624]
Length = 219
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 107/199 (53%), Gaps = 11/199 (5%)
Query: 8 HRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQ-----VAVQ 62
H D Y +LA++ GYR+RA++KL ++D ++ ++DL APG W Q +A Q
Sbjct: 18 HVNDPYVKLAQKEGYRARAAYKLKEIDETLRLVKPGQVIVDLGCAPGAWSQYLRRRLAPQ 77
Query: 63 RVPVGSL---VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDG 119
VG L V+GLDL+P+ PI G ++ D + A+++ +++ R DLV+ D
Sbjct: 78 GAAVGELNGSVIGLDLLPMEPIEGVQYIQGDFREAAVLAQLEALLQG---RPVDLVVSDM 134
Query: 120 SPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKV 179
+PN+ G + + LV ++ L P GT V KVF Y+ +L K F+ V
Sbjct: 135 APNLSGVASVDTARVEELVALAIDFCNAHLKPSGTLVAKVFHGSGYNELLALFKNNFKTV 194
Query: 180 EVDKPAASRSASAEIYLLG 198
+ KP ASR S+E +L+G
Sbjct: 195 KPLKPKASRDRSSETFLIG 213
>gi|328544053|ref|YP_004304162.1| ribosomal RNA large subunit methyltransferase J [Polymorphum gilvum
SL003B-26A1]
gi|326413797|gb|ADZ70860.1| Ribosomal RNA large subunit methyltransferase J [Polymorphum gilvum
SL003B-26A1]
Length = 240
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 107/196 (54%), Gaps = 6/196 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV---PVG 67
D Y R AK GYRSRA++KL+++D K L+ V+DL AAPGGW QVAV+RV P
Sbjct: 37 DPYVRRAKMEGYRSRAAYKLIEIDDKHRLLKPGQRVVDLGAAPGGWCQVAVERVGSTPEN 96
Query: 68 SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAW 127
LV+G+D + + I G V L +D + A +M G D+VL D + G
Sbjct: 97 PLVVGIDYLDMDHIPGVVFLRKDFLDDDAPA---ALMAALGGHRPDVVLSDMAAPTTGHR 153
Query: 128 AQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAAS 187
+ + L ++ A + LAP G+F+ KVFR +++L LK+ FE V KP AS
Sbjct: 154 QTDHLRTTHLFEVAILFARENLAPGGSFLAKVFRGGTENALLADLKRDFETVVHVKPPAS 213
Query: 188 RSASAEIYLLGIKYKA 203
R S E+Y++ ++
Sbjct: 214 RKESPELYVVAKGFRG 229
>gi|46200783|ref|ZP_00207841.1| COG0293: 23S rRNA methylase [Magnetospirillum magnetotacticum MS-1]
Length = 247
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 108/198 (54%), Gaps = 9/198 (4%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV---- 66
D Y AK G+RSRA++KL+QLD +F L+ V+DL AAPGGW QVAV +V
Sbjct: 48 DPYVHEAKRLGFRSRAAFKLIQLDERFHILKPGLRVVDLGAAPGGWTQVAVDKVGALRPK 107
Query: 67 -GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
G V+G+D++ P+ GA++L+ D + R+K+ + D+VL D + G
Sbjct: 108 GGGKVVGMDILEWDPLPGAITLQGDFLADDAPDRLKEALGGPA----DVVLSDMAAPTTG 163
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
+ + + LV ++ A + L P GTFV KVF+ ++L LK+ F V KP
Sbjct: 164 HPSTDHLRIIGLVEVALHFALEVLTPGGTFVAKVFQGGTEKTLLDQLKRNFTTVRHAKPP 223
Query: 186 ASRSASAEIYLLGIKYKA 203
ASR SAE Y++ ++
Sbjct: 224 ASRQGSAETYVVATGFRG 241
>gi|94496284|ref|ZP_01302862.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Sphingomonas sp. SKA58]
gi|94424463|gb|EAT09486.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Sphingomonas sp. SKA58]
Length = 224
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 106/196 (54%), Gaps = 5/196 (2%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y + AK G+RSRA++KL++LD KF F++ S AV+DL APGGW QV + P
Sbjct: 27 RHLNDPYVKKAKAEGWRSRAAFKLIELDEKFHFVKGSRAVVDLGVAPGGWAQVVRKMAPK 86
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
+ V+G+DL+P PI G E D + +++ + + DLV+ D + N G
Sbjct: 87 AA-VVGIDLLPTDPIPGVTLFEMDFMDDKAPDLLREALGQEP----DLVISDMAANTVGH 141
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ + LV + + A + L GTFV KVF + +L LK+ F ++ KP A
Sbjct: 142 APTDHLRTMGLVEAAAQFAVENLRKGGTFVAKVFAGGTDAQLLAVLKKHFTTIKHAKPPA 201
Query: 187 SRSASAEIYLLGIKYK 202
SR S E Y++ +K
Sbjct: 202 SRKGSVEWYVVAQGFK 217
>gi|294891102|ref|XP_002773421.1| ribosomal RNA methyltransferase, putative [Perkinsus marinus ATCC
50983]
gi|239878574|gb|EER05237.1| ribosomal RNA methyltransferase, putative [Perkinsus marinus ATCC
50983]
Length = 532
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/312 (32%), Positives = 152/312 (48%), Gaps = 58/312 (18%)
Query: 541 TNKWFSQEIFAEAVQNGD--------LGKLGSEDETQV---DKQAEKHSIPEKAKQKMAN 589
T++WFSQE+F E + D + +L ED ++ DKQ K EK K+ +A
Sbjct: 220 TDRWFSQELFKEDSDDDDEMKDDVDGIRELDDEDLLKLPLTDKQLRK----EKRKRDLAK 275
Query: 590 DAAGPKSTHNQVSEVE------------------GDFEIVPAPGADSSDDSSSDESEDEE 631
++ EVE G FE+VPA A S+ + ED +
Sbjct: 276 KEKKEAKRARKMGEVEEEGDGHGHKDGDVAGTDVGGFEVVPASTA-----SAFERPEDPQ 330
Query: 632 VDTKAEILACAKKMLRKKQREQILDDAYNRYMFDDD---GLPDWFLEEERRHRQAIRPVT 688
AE LA + KK R +++D AYNRY F DD LPDWF+EEE+ + + P++
Sbjct: 331 --ELAETLALGSLLTSKKSRMELIDSAYNRYTFADDHNAALPDWFVEEEKPFTRQMVPIS 388
Query: 689 KEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRK 748
KE + +A+ +EI+ARP +KVAEA ARKK+ ++LEK+RK A + + +D+ D K +
Sbjct: 389 KELMNQYRAKMREINARPVRKVAEAAARKKKRLTQQLEKLRKTATSLQESSDLGDSGKAR 448
Query: 749 QIEQLYKSAVPKRPKKEYVVAKKGVQVRAGKGKV-----------LVDPRMKKDSRTHGS 797
+ + + KKE VA VQ + G + +VD R+K D R
Sbjct: 449 AMRKAVGKVLRGNDKKE--VAYAAVQGKGGSKVISKGASRGAKVKMVDKRLKNDKRAQKR 506
Query: 798 GKAR--KGGSKK 807
R K G+K+
Sbjct: 507 ADKRLKKAGAKR 518
>gi|374292556|ref|YP_005039591.1| Ribosomal RNA large subunit (23S) methyltransferase [Azospirillum
lipoferum 4B]
gi|357424495|emb|CBS87374.1| Ribosomal RNA large subunit (23S) methyltransferase [Azospirillum
lipoferum 4B]
Length = 238
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 109/200 (54%), Gaps = 7/200 (3%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y A + GYRSRA++KL+QLD KF L V+DL AAPGGW Q+AV++V
Sbjct: 35 RHLNDPYVAEATKRGYRSRAAFKLLQLDEKFRLLAPGKRVVDLGAAPGGWTQIAVEKVQT 94
Query: 67 ---GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNV 123
G V+GLD++P+ P+ GA +++ D + +K+ + DLVL D +
Sbjct: 95 AKDGWKVVGLDILPMDPVPGATTMQADFLEEGAAEALKEALGGPA----DLVLSDMAAPT 150
Query: 124 GGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDK 183
G + + L + A + LAP G FV K+F+ S+L L++ F V+ K
Sbjct: 151 TGHQQTDHLRIMGLAEAAYDFAEEVLAPGGAFVAKLFQGGAERSLLDRLRRDFAVVKHAK 210
Query: 184 PAASRSASAEIYLLGIKYKA 203
P ASR+ S+E Y++ ++
Sbjct: 211 PPASRAESSETYVVATGFRG 230
>gi|288941981|ref|YP_003444221.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Allochromatium vinosum
DSM 180]
gi|288897353|gb|ADC63189.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Allochromatium vinosum
DSM 180]
Length = 206
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 108/196 (55%), Gaps = 3/196 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y + + GYRSRA++KL+++ K L+ V+DL AAPG W Q+A Q V
Sbjct: 13 RHFNDPYVKRVQVDGYRSRAAYKLLEIQEKDPILKPGMRVVDLGAAPGSWSQIARQLVGP 72
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ LD++P+ P+ G V L+ D E +R+++ + E D+VL D +PN+ G
Sbjct: 73 EGCVVALDILPMEPLPGVVVLQGDFRDDEVLSRLREAIGEA---PLDVVLSDMAPNITGT 129
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ LV +++LA L P GT VTKVF+ + + L+ F +V KP +
Sbjct: 130 MVVDQTRAMYLVELALELARSHLKPGGTLVTKVFQGTGFDDYMRELRSSFRQVATRKPKS 189
Query: 187 SRSASAEIYLLGIKYK 202
SR+ S E++L+ ++
Sbjct: 190 SRTESREVFLVAKGFR 205
>gi|422295818|gb|EKU23117.1| rrna methyltransferase [Nannochloropsis gaditana CCMP526]
Length = 806
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 125/212 (58%), Gaps = 25/212 (11%)
Query: 604 VEGDFEIVPA----------PGADSSD-DSSSDESEDEEVDTKAEILACAKKMLRKKQRE 652
++ FE+VPA P ADS DS ++ +DEE +A LA MLR+ + +
Sbjct: 569 LQSTFEVVPAGGPPLLSLVPPVADSRKYDSDHEDWDDEE---RARTLAIGTMMLRRSKAK 625
Query: 653 QILDDAYNRYMFDDDG-LPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVA 711
+++D +YNR+ ++D G LP+WF+++E RH + P+ K + MK +FK + ++P KVA
Sbjct: 626 ELVDASYNRFAWNDAGDLPEWFVDDEERHYRPQIPIPKPLLDEMKERFKSLASKPIAKVA 685
Query: 712 EAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPK--RPKKEYVVA 769
EA+ARKK +++L++ + KA+ I D+++R K K I++ K K RP K Y V
Sbjct: 686 EARARKKHRLVQRLKQAKSKASAIVSNPDMTERDKMKAIQKAVKGKGDKFSRPDKVYAVV 745
Query: 770 KKGVQVRA-------GKGKV-LVDPRMKKDSR 793
++G +A G+ +V LVD RMKKD+R
Sbjct: 746 RRGGSSQAKQKDGASGRARVKLVDKRMKKDTR 777
>gi|166796476|gb|AAI59356.1| LOC100145257 protein [Xenopus (Silurana) tropicalis]
Length = 270
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/168 (44%), Positives = 111/168 (66%), Gaps = 15/168 (8%)
Query: 638 ILACAKKMLRKKQREQILDDAYNRYMFDDDG--LPDWFLEEERRHRQAIRPVTKEEIAAM 695
++A +KK R ++D ++NR F+DD LPDWF+ EER+HR PV + +
Sbjct: 104 VIATSKKSTR-----DLIDSSFNRRNFNDDEDELPDWFVSEERKHRIVQVPVDRYMMEEY 158
Query: 696 KAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANVISDQADISDRSKRKQIEQLY- 754
+ Q +E++ARP KKVAEAKARKKR ++K+E+++KKA + + +DIS+R K Q+ +Y
Sbjct: 159 RKQQRELNARPIKKVAEAKARKKRRTLKKMEQIKKKAEAVVNTSDISEREKAAQLRSIYR 218
Query: 755 KSAVPK-RPKKEYVVAKKGV--QVR--AG-KGKV-LVDPRMKKDSRTH 795
K + K +P+ Y+VAKKGV +VR AG KG +VD RM+KD+R+
Sbjct: 219 KCGLGKEKPQVTYLVAKKGVGRKVRRPAGIKGHFKVVDGRMRKDTRSQ 266
>gi|429962346|gb|ELA41890.1| 23S rRNA (uridine(2552)-2'-O-)-methyltransferase [Vittaforma
corneae ATCC 50505]
Length = 258
Score = 117 bits (293), Expect = 2e-23, Method: Composition-based stats.
Identities = 71/211 (33%), Positives = 118/211 (55%), Gaps = 6/211 (2%)
Query: 4 VKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQR 63
+ K R D YY AK GYR+R+++KL+ ++ + L S+ V+DLCAAPG W QV
Sbjct: 3 IPSKDRRDYYYYQAKALGYRARSAFKLLDINEAYRILESASKVIDLCAAPGSWSQVLASH 62
Query: 64 VPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNV 123
+ ++ +D+ +API G L++DIT EC ++ +V + G +A DL++ DG+P+V
Sbjct: 63 TK--AKIVAVDIQDMAPINGVTILKEDITSGECLNKIFEVFD--GEKA-DLIVCDGAPDV 117
Query: 124 GGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDK 183
G + Q L+ ++ + T+ L FV K FR +++ + F++V++ K
Sbjct: 118 TGFHDLDEFLQLDLLKSALHICTKTLKTGSNFVGKCFRGAYSGYIVHHFLKFFDRVDLVK 177
Query: 184 PAASRSASAEIYLLGIKYKAPAKIDPRLLDV 214
P ASR S E +L+ +K A +P +DV
Sbjct: 178 PRASRHVSIECFLVCFGFK-DANNNPFEIDV 207
>gi|374852419|dbj|BAL55352.1| cell division protein FtsJ [uncultured gamma proteobacterium]
Length = 206
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 109/197 (55%), Gaps = 3/197 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y RLA+ GYRSRA +KL ++ ++ L V+DL AAPGGW Q A ++
Sbjct: 13 EHFDDAYVRLAQAQGYRSRAVFKLQEIQARDRILAPGMTVVDLGAAPGGWSQFAADQIKP 72
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
G ++ +D++P+ P+ G L+ D T+ + R+K V++E R ++VL D +PN+ G
Sbjct: 73 GGKIVAVDILPMDPLPGVTFLQGDFTEEQTWQRLKAVLQE---RPVNVVLSDLAPNLSGN 129
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ + L ++ A Q L G +TK+F+ + + + L+ F KV KP A
Sbjct: 130 RSVDQARAVHLAELALDTAEQLLVEGGCLLTKLFQGEGFEAFQKRLRTRFAKVTTRKPKA 189
Query: 187 SRSASAEIYLLGIKYKA 203
SRS S E+YLL ++
Sbjct: 190 SRSRSREVYLLAQGFRG 206
>gi|154244787|ref|YP_001415745.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Xanthobacter
autotrophicus Py2]
gi|226705323|sp|A7IDJ5.1|RLME_XANP2 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|154158872|gb|ABS66088.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Xanthobacter
autotrophicus Py2]
Length = 254
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 111/199 (55%), Gaps = 9/199 (4%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV----PV 66
D Y AK G+RSRA++KL+++D K L+ ++DL AAPGGW QVA +++ +
Sbjct: 37 DPYVARAKREGWRSRAAFKLIEMDEKARLLKRGMRIVDLGAAPGGWSQVAAKKIGLEEGL 96
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
G +V +DL+ I PI G + D P+ R+ ++ DLV+ D + N G
Sbjct: 97 GKIV-AIDLLEIEPIPGVAFAQMDFLAPDAPERLIAMLGGQA----DLVMSDMAANATGH 151
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ + LV +V+ A Q LAP GTF+ KV + +++L LK+ F +V KPAA
Sbjct: 152 KKTDHLRIVGLVELAVEFARQVLAPGGTFLAKVIQGGMEATLLADLKRDFTQVRHVKPAA 211
Query: 187 SRSASAEIYLLGIKYKAPA 205
SR+ SAE+Y+L ++ A
Sbjct: 212 SRADSAELYVLATGFRGEA 230
>gi|226469920|emb|CAX70241.1| FtsJ homolog 1 [Schistosoma japonicum]
Length = 345
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 123/218 (56%), Gaps = 18/218 (8%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHA-----VLDLCAAPGG 55
MGK + + D YYRLAKE G+R+R+++KL+Q+D ++ L S+ V+DLCAAPG
Sbjct: 1 MGK-SSRDKRDIYYRLAKEEGWRARSAYKLLQIDDEYGILSSTENIPLERVVDLCAAPGS 59
Query: 56 WMQVAVQRVPVGSL--------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEH 107
W QV +R+ ++ +DL +API G + ++ DIT + +++++
Sbjct: 60 WSQVLSKRLWESKSPDDRKSVKIVAVDLQAMAPIPGVIQIQGDITSQD---TAQQIIKHF 116
Query: 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSS 167
+ LV+ DG+P+V G + Q+ L++ ++ + ++ L GTFV KVFR +D
Sbjct: 117 SGKLAQLVVCDGAPDVTGLHDLDEYVQSHLILAALTICSRVLELGGTFVAKVFRGRDSGL 176
Query: 168 VLYCLKQLFE-KVEVDKPAASRSASAEIYLLGIKYKAP 204
+ L+ LF +V KP ASR++S E +++ + P
Sbjct: 177 LGSQLRCLFSGQVSFAKPKASRNSSLESFVVCRGFMGP 214
>gi|123449199|ref|XP_001313321.1| FtsJ-like methyltransferase family protein [Trichomonas vaginalis
G3]
gi|121895200|gb|EAY00392.1| FtsJ-like methyltransferase family protein [Trichomonas vaginalis
G3]
Length = 250
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 113/205 (55%), Gaps = 5/205 (2%)
Query: 9 RLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGS 68
R D Y + A E G+R+R+++KL+Q++S+ FL+ S V+DLC+APG W QV + +P
Sbjct: 7 RRDVYKKTAVEEGWRARSAYKLIQVESEMHFLKDSTRVVDLCSAPGSWSQVCAKLMPETD 66
Query: 69 L--VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
++ +DL I PI G L DIT + V +++ G +A D VL DG+P+
Sbjct: 67 ARKIISIDLRRIVPIDGVTELRGDITDVKTAENVISLLD--GNKA-DAVLADGAPDTIIR 123
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ Q+ +V S+ +AT L GTFV+K+FR++ +L F K+ + KP A
Sbjct: 124 IEFDEYVQHNIVKASLTIATMVLREGGTFVSKIFRTKSLPKLLAIFGCFFSKITMCKPRA 183
Query: 187 SRSASAEIYLLGIKYKAPAKIDPRL 211
R +S E +++ +K P P L
Sbjct: 184 CRLSSVESFIVCQGFKLPDGYTPTL 208
>gi|334143726|ref|YP_004536882.1| ribosomal RNA large subunit methyltransferase E
[Thioalkalimicrobium cyclicum ALM1]
gi|333964637|gb|AEG31403.1| Ribosomal RNA large subunit methyltransferase E
[Thioalkalimicrobium cyclicum ALM1]
Length = 205
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 109/194 (56%), Gaps = 3/194 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y A++ G+RSRA +KL +++ K ++ V+DL AAPGGW Q A Q+V
Sbjct: 13 EHFDDPYVLQAQKEGWRSRAIYKLKEINEKDQLIKPDMLVIDLGAAPGGWSQYAAQQVSH 72
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
VL LD++P+ G L+ D T+ +K+++ R DLV+ D +PN G
Sbjct: 73 AGEVLALDILPVESYAGVRFLQGDFTEESV---FEKLLDLINKRPVDLVMSDMAPNFSGN 129
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ LV ++ LA++ L P G + KVF+ + Y +L ++Q + KV KP A
Sbjct: 130 KGVDIPRAMYLVELTLDLASRVLKPGGNVLMKVFQGEGYEQLLATMRQDYCKVITRKPQA 189
Query: 187 SRSASAEIYLLGIK 200
SR+ S+EIYLLG+K
Sbjct: 190 SRARSSEIYLLGLK 203
>gi|86750307|ref|YP_486803.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Rhodopseudomonas
palustris HaA2]
gi|123292402|sp|Q2IV68.1|RLME_RHOP2 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|86573335|gb|ABD07892.1| Ribosomal RNA methyltransferase RrmJ/FtsJ [Rhodopseudomonas
palustris HaA2]
Length = 236
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 117/207 (56%), Gaps = 12/207 (5%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSL- 69
D Y AK GYRSRA++KL ++D K+ FL+S AV+DL AAPGGW QVA +R +GS
Sbjct: 33 DPYVAQAKRDGYRSRAAYKLTEIDDKYHFLKSGQAVVDLGAAPGGWSQVAAKR--IGSAN 90
Query: 70 ----VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
++ +DL+ + I G + D ++++++ G D+V+ D + N G
Sbjct: 91 GRGKLIAIDLLEMGEIPGVTFAQLDFLDSAAPDKLREMLGGDGA---DVVMSDMAGNTTG 147
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
+ + LV + + A++ L P G FV KVF+S ++++ LK+ F V+ KPA
Sbjct: 148 HRKTDQLRIVGLVESAAQFASEVLKPGGIFVAKVFQSGADATLMNQLKRDFATVKHVKPA 207
Query: 186 ASRSASAEIYLLGIKYKA--PAKIDPR 210
ASR S+E Y+L + ++ PA +P+
Sbjct: 208 ASRKDSSERYVLAMGFRGTQPAAQEPQ 234
>gi|421567246|ref|ZP_16012982.1| ribosomal RNA large subunit methyltransferase E [Neisseria
meningitidis NM3001]
gi|402344257|gb|EJU79398.1| ribosomal RNA large subunit methyltransferase E [Neisseria
meningitidis NM3001]
Length = 206
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 108/192 (56%), Gaps = 3/192 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y +A++ GYR+RA++KL++++ K ++ + DL +APG W QVA +
Sbjct: 14 EHVNDHYVHMAQKDGYRARAAYKLLEINEKDKLIKPGTVLADLGSAPGSWSQVAAKLTGT 73
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V LD++P+ I G ++ D + + A+ + +++ R DLV+ D +PN+ G
Sbjct: 74 SGAVFALDILPMEAIGGVSFIQGDFRENDVLAQFETLLDN---RPLDLVICDMAPNMSGN 130
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ L ++ A+Q+L G+F+ KVF+ Y + ++++F V+ KP A
Sbjct: 131 AVSDQARSFYLCELALDFASQYLKTGGSFLVKVFQGAGYQEYMAAMREIFGTVQTRKPEA 190
Query: 187 SRSASAEIYLLG 198
SR+ S+EIYLLG
Sbjct: 191 SRNRSSEIYLLG 202
>gi|170739001|ref|YP_001767656.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylobacterium sp.
4-46]
gi|168193275|gb|ACA15222.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylobacterium sp.
4-46]
Length = 258
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 103/200 (51%), Gaps = 11/200 (5%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV------ 64
D Y AK GYRSRA++KL+++D +F LR V+DL AAPGGW QVA +V
Sbjct: 37 DPYVARAKREGYRSRAAYKLLEIDERFHLLRPGQRVVDLGAAPGGWSQVAAAKVGSHPGA 96
Query: 65 -PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNV 123
P V+G+DL+ I P+ G L D P AR+ ++ DLV+ D + N
Sbjct: 97 PPPRGRVVGIDLLEIEPMPGVDFLTLDFLDPSAPARLIALLGGPA----DLVMSDMAANA 152
Query: 124 GGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDK 183
G + + L + A + LAP G ++ KV + +L LK+ F V K
Sbjct: 153 TGHKKTDHLRIMGLAETAAAFAREVLAPGGAYLAKVLQGGTEGGLLADLKRDFAAVRHVK 212
Query: 184 PAASRSASAEIYLLGIKYKA 203
PAASR+ S+E+Y+L Y+
Sbjct: 213 PAASRADSSELYVLATGYRG 232
>gi|443683858|gb|ELT87960.1| hypothetical protein CAPTEDRAFT_174292 [Capitella teleta]
Length = 223
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 114/202 (56%), Gaps = 13/202 (6%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV------ 64
D Y + A+E +R R+++KL+++D K S L+ H V+D AAPG W QVAV RV
Sbjct: 21 DPYVKKAREESWRCRSAFKLMEIDDKHSILKPGHIVIDCGAAPGSWSQVAVHRVNSLGKD 80
Query: 65 --PVGSLVLGLDLVPIAPIRGAVSLEQ-DITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
P GS V+G+DL + P+ GA L Q D T E + + +++ G +A DLV+ D +P
Sbjct: 81 PGPTGS-VIGIDLQHMMPVEGATMLHQSDFTSHETQKSLLTMLD--GSKA-DLVMSDMAP 136
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
N G + + L ++K A L GTF+ K++ + + + ++ +F++V V
Sbjct: 137 NPVGVKTVDHTAIVKLCKSALKFAANVLQLNGTFLCKLWEGNERNDLEKLMRIVFKQVRV 196
Query: 182 DKPAASRSASAEIYLLGIKYKA 203
KP ASRS SAEI+LL +K
Sbjct: 197 VKPLASRSDSAEIFLLAKHFKG 218
>gi|24372779|ref|NP_716821.1| 23S rRNA (uridine2552-2'-O)-methyltransferase RrmJ [Shewanella
oneidensis MR-1]
gi|81462880|sp|Q8EHM3.1|RLME_SHEON RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|24346860|gb|AAN54266.1| 23S rRNA (uridine2552-2'-O)-methyltransferase RrmJ [Shewanella
oneidensis MR-1]
Length = 209
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 111/196 (56%), Gaps = 3/196 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y +LA++ G RSRA++KL +L K +R V+DL AAPGGW QVAV+ V
Sbjct: 16 EHFDDHYVKLAQKRGLRSRAAFKLEELQQKDQLIRPGMTVVDLGAAPGGWSQVAVKLVGD 75
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ D++P+ PI G L+ D + + ++ ++ G D+VL D +PN+ G+
Sbjct: 76 KGKVIACDILPMDPIVGVDFLQGDFREEKV---LEALLTRVGADKVDVVLSDMAPNMSGS 132
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ LV ++ + Q LAP G+F KVF+ + + + +K+ F+ V+ KP +
Sbjct: 133 DGVDQPRAMYLVELALDMCHQVLAPNGSFAVKVFQGEGFDEYMKAVKEAFKVVKTRKPDS 192
Query: 187 SRSASAEIYLLGIKYK 202
SR+ S E+YL+ YK
Sbjct: 193 SRARSREVYLVATGYK 208
>gi|393722927|ref|ZP_10342854.1| 23S rRNA methyltransferase J [Sphingomonas sp. PAMC 26605]
Length = 223
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 108/196 (55%), Gaps = 11/196 (5%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y + AK G+RSRA++KL +LD +F FL+ V+DL APGGW QV ++VP ++V
Sbjct: 32 DPYVKRAKADGFRSRAAYKLSELDERFGFLKGKRRVVDLGLAPGGWAQVVRRQVPKAAIV 91
Query: 71 LGLDLVPIAPIRGAVSLEQDI---TKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAW 127
G+DL+P+ PI G L+ D PE ++M G DLVL D + N G
Sbjct: 92 -GIDLLPVDPIEGVTILQLDFMDDVAPE------RLMAGLGGTP-DLVLSDMAANTVGHP 143
Query: 128 AQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAAS 187
+A+ LV ++ A L P G FV KVF ++++ +K+ F V+ KP AS
Sbjct: 144 QTDALRTMGLVEAALAFAIDVLEPGGAFVGKVFAGGADTALVAEMKRNFTTVKHAKPPAS 203
Query: 188 RSASAEIYLLGIKYKA 203
R AS+E Y++ +K
Sbjct: 204 RKASSEWYVVAQGFKG 219
>gi|329297291|ref|ZP_08254627.1| 23S rRNA methyltransferase J [Plautia stali symbiont]
Length = 209
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 107/191 (56%), Gaps = 3/191 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H DKY + A++ G RSRA +KL ++ + V+DL AAPGGW Q VQ++
Sbjct: 16 EHFSDKYVQQAQKKGLRSRAWFKLDEIQQGDKLFKPGMTVVDLGAAPGGWSQYVVQQIGS 75
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
G ++ DL+PI PI G L+ D A +K ++E G + +V+ D +PN+ G
Sbjct: 76 GGRIIACDLLPIDPIGGVDFLQGDFRD---EAVLKALLERVGDQKVQVVMSDMAPNMSGT 132
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
A + LV ++++ LAP G+FV KVF+ + L ++ LF KV++ KP A
Sbjct: 133 PAVDIPRSMYLVELALEMCRDVLAPGGSFVVKVFQGDGFDEYLREIRSLFTKVKIRKPDA 192
Query: 187 SRSASAEIYLL 197
SRS S E+Y++
Sbjct: 193 SRSRSREVYIV 203
>gi|326797289|ref|YP_004315109.1| ribosomal RNA large subunit methyltransferase E [Marinomonas
mediterranea MMB-1]
gi|326548053|gb|ADZ93273.1| Ribosomal RNA large subunit methyltransferase E [Marinomonas
mediterranea MMB-1]
Length = 206
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 115/197 (58%), Gaps = 3/197 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y + A+ GYRSRAS+KL++L+ K ++ + V+DL +APGGW Q+A + V
Sbjct: 13 EHVNDPYVKQAQVDGYRSRASYKLLELNDKDKLIKPGNLVMDLGSAPGGWSQIASKLVGN 72
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ D++P+ + G ++ D T+ ++ ++M D+V+ D +PN+ G
Sbjct: 73 KGKVIASDILPMDSLAGVEFIQGDFTE---QSVFDEIMVAVNGAPVDVVVSDMAPNLSGI 129
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ + S LV ++ +ATQ L PKG+F KVF + Y + + +++ F+ V V KP +
Sbjct: 130 ASSDQASSIYLVELALDMATQVLKPKGSFAVKVFHGEGYDAFVKEVRKHFQTVVVRKPDS 189
Query: 187 SRSASAEIYLLGIKYKA 203
SR+ S E+YL+G +K
Sbjct: 190 SRARSREVYLVGKGFKG 206
>gi|91792359|ref|YP_562010.1| 23S rRNA methyltransferase J [Shewanella denitrificans OS217]
gi|123357037|sp|Q12QI9.1|RLME_SHEDO RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|91714361|gb|ABE54287.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Shewanella denitrificans
OS217]
Length = 209
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 109/196 (55%), Gaps = 3/196 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y +LA++ G RSRA++KL ++ K +R V+DL AAPGGW QVAV+
Sbjct: 16 EHFDDHYVKLAQKRGLRSRAAFKLEEIQQKDHLIRQGMTVVDLGAAPGGWSQVAVKLAGD 75
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ D++P+ PI G L+ D + + +++ G D+VL D +PN+ G+
Sbjct: 76 NGKVIACDILPMDPIVGVDFLQGDFREENV---LNALLDRVGEDKVDVVLSDMAPNMSGS 132
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ LV ++++ Q LAP G F KVF+ + + + +KQ F+ V+ KP +
Sbjct: 133 DGVDQPRAMYLVELALEMCHQVLAPNGCFAVKVFQGEGFDEYIKSVKQAFKTVKTRKPDS 192
Query: 187 SRSASAEIYLLGIKYK 202
SR+ S E+YL+ YK
Sbjct: 193 SRARSREVYLVATGYK 208
>gi|344289813|ref|XP_003416635.1| PREDICTED: putative ribosomal RNA methyltransferase 2-like
[Loxodonta africana]
Length = 260
Score = 117 bits (292), Expect = 4e-23, Method: Composition-based stats.
Identities = 75/206 (36%), Positives = 110/206 (53%), Gaps = 14/206 (6%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV-- 64
+H D + + AK YR R+++KL+++D + LR VLD AAPG W QVAVQ V
Sbjct: 51 RHLKDPFVKAAKVESYRCRSAFKLLEVDERHRILRPGLRVLDCGAAPGAWSQVAVQSVNA 110
Query: 65 -------PVGSLVLGLDLVPIAPIRGAVSL-EQDITKPECRARVKKVMEEHGVRAFDLVL 116
PVG VLG+DL+ I P+ GA L D+T P R+++++ H RA D++L
Sbjct: 111 AGTDPSSPVG-FVLGVDLLHIFPLEGATFLCPADVTDPRTFQRIRELLPGH--RA-DVIL 166
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
D +PN G + +L + LA L P GTF+ K++ + L Q F
Sbjct: 167 SDMAPNATGIRDLDHNRLISLCWSLLDLAQHILHPGGTFLCKIWTGSQTHRLQKRLTQEF 226
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYK 202
+ + KP ASR S+E+YLL +Y+
Sbjct: 227 QSMRTIKPNASRKESSEVYLLATQYR 252
>gi|297539174|ref|YP_003674943.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylotenera versatilis
301]
gi|297258521|gb|ADI30366.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylotenera versatilis
301]
Length = 206
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 110/192 (57%), Gaps = 3/192 (1%)
Query: 8 HRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVG 67
H D++ + A++ GYR+RA++KL ++D K ++ ++DL + PG W QVAVQR+
Sbjct: 14 HINDEFVKRAQKEGYRARAAYKLTEIDDKDKLIKPGMTIVDLGSTPGSWSQVAVQRLKGQ 73
Query: 68 SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAW 127
++ LDL+ + PI+G ++ D + ++K + V DLV+ D +PN+ G
Sbjct: 74 GRIIALDLLEMEPIKGVEFIQGDFREETILEILEKSLNGKQV---DLVIADMAPNMSGIT 130
Query: 128 AQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAAS 187
+ L +++ + ++L P G F+ KVF + + ++ ++ +F+KV KP AS
Sbjct: 131 IVDQAGAAYLTELALEFSKEWLKPSGNFLVKVFIGEGFDDIVKNMRTIFDKVVTRKPKAS 190
Query: 188 RSASAEIYLLGI 199
R S+E+YLLG+
Sbjct: 191 RGRSSEVYLLGL 202
>gi|170746591|ref|YP_001752851.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylobacterium
radiotolerans JCM 2831]
gi|170653113|gb|ACB22168.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylobacterium
radiotolerans JCM 2831]
Length = 241
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 106/197 (53%), Gaps = 5/197 (2%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y AK GYRSRA++KL+++D ++ LR ++DL AAPGGW QVA + V V
Sbjct: 42 DPYVARAKREGYRSRAAYKLLEIDERYKLLRPGQKIVDLGAAPGGWSQVAARVVGPTGRV 101
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL+ I P+ G + D PE R+ ++ DLV+ D + N G +
Sbjct: 102 VGIDLLEIEPMAGVEFITLDFLDPEAPDRLTGMLGGPA----DLVMSDMAANATGHKKTD 157
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ L + + A + L P G ++ KV + ++L LK+ F V KPAASR+
Sbjct: 158 HLRIIGLAETAAEFAREILGPGGAYLAKVLQGGTEGALLTDLKRDFATVRHVKPAASRAD 217
Query: 191 SAEIYLLGIKYK-APAK 206
S+E+Y+L Y+ AP +
Sbjct: 218 SSELYVLATGYRGAPGR 234
>gi|120597892|ref|YP_962466.1| 23S rRNA methyltransferase J [Shewanella sp. W3-18-1]
gi|146293936|ref|YP_001184360.1| 23S rRNA methyltransferase J [Shewanella putrefaciens CN-32]
gi|386314688|ref|YP_006010853.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Shewanella putrefaciens
200]
gi|143461753|sp|A1RGW7.1|RLME_SHESW RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|189040339|sp|A4Y9C8.1|RLME_SHEPC RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|120557985|gb|ABM23912.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Shewanella sp. W3-18-1]
gi|145565626|gb|ABP76561.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Shewanella putrefaciens
CN-32]
gi|319427313|gb|ADV55387.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Shewanella putrefaciens
200]
Length = 209
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 111/196 (56%), Gaps = 3/196 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y +LA++ G RSRA++KL +L K +R V+DL AAPGGW QVAV+ V
Sbjct: 16 EHFDDHYVKLAQKRGLRSRAAFKLEELQQKDQLIRPGMTVVDLGAAPGGWSQVAVKLVGD 75
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ D++P+ PI G L+ D + + ++ ++ G D+VL D +PN+ G+
Sbjct: 76 RGKVIACDILPMDPIVGVDFLQGDFREEKV---LEALLTRVGADKVDVVLSDMAPNMSGS 132
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ LV ++ + Q LAP G+F KVF+ + + + +K+ F+ V+ KP +
Sbjct: 133 DGVDQPRAMYLVELALDMCHQVLAPNGSFAVKVFQGEGFDEYMKAVKEAFKVVKTRKPDS 192
Query: 187 SRSASAEIYLLGIKYK 202
SR+ S E+YL+ YK
Sbjct: 193 SRARSREVYLVATGYK 208
>gi|148225294|ref|NP_001089803.1| FtsJ RNA methyltransferase homolog 2 [Xenopus laevis]
gi|76779644|gb|AAI06596.1| MGC131369 protein [Xenopus laevis]
Length = 246
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 109/201 (54%), Gaps = 12/201 (5%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV---- 66
D Y + A+ H YR R+++KL+++DSK L H V+D AAPG W QVAV++V
Sbjct: 45 DPYIKEAQAHNYRCRSAFKLLEIDSKHHILHPGHHVIDCGAAPGAWSQVAVEKVNSLGRD 104
Query: 67 ----GSLVLGLDLVPIAPIRGAVSLEQ-DITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
V+G+DL+ I P+ GAV L DIT + + ++ V+ D++L D +P
Sbjct: 105 SAARAGFVVGVDLLNITPLDGAVFLSNSDITDSDTQRKIISVLPSGKA---DVILSDMAP 161
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
N G + + + ++L+ + L P GTF+ KV+ + S V L+Q F+ V
Sbjct: 162 NATGIRDLDHQRLVNMCLSLLELSQRVLLPGGTFLCKVWDGSEISLVRDRLRQRFQDVRT 221
Query: 182 DKPAASRSASAEIYLLGIKYK 202
KP ASR SAEIYLL +K
Sbjct: 222 VKPKASRMESAEIYLLAKMHK 242
>gi|336310469|ref|ZP_08565441.1| cell division protein FtsJ / ribosomal RNA large subunit
methyltransferase J [Shewanella sp. HN-41]
gi|335866199|gb|EGM71190.1| cell division protein FtsJ / ribosomal RNA large subunit
methyltransferase J [Shewanella sp. HN-41]
Length = 209
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 111/196 (56%), Gaps = 3/196 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y +LA++ G RSRA++KL +L K +R V+DL AAPGGW QVAV+ V
Sbjct: 16 EHFDDHYVKLAQKRGLRSRAAFKLEELQQKDQLIRPGMTVVDLGAAPGGWSQVAVKLVGD 75
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ D++P+ PI G L+ D + + ++ ++ G D+VL D +PN+ G+
Sbjct: 76 RGKVIACDILPMDPIVGVDFLQGDFREDKV---LEALLTRVGADKVDVVLSDMAPNMSGS 132
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ LV ++ + Q LAP G+F KVF+ + + + +K+ F+ V+ KP +
Sbjct: 133 DGVDQPRAMYLVELALDMCHQVLAPNGSFAVKVFQGEGFDEYMKAVKEAFKVVKTRKPDS 192
Query: 187 SRSASAEIYLLGIKYK 202
SR+ S E+YL+ YK
Sbjct: 193 SRARSREVYLVATGYK 208
>gi|399546762|ref|YP_006560070.1| ribosomal RNA large subunit methyltransferase E [Marinobacter sp.
BSs20148]
gi|399162094|gb|AFP32657.1| Ribosomal RNA large subunit methyltransferase E [Marinobacter sp.
BSs20148]
Length = 206
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 114/197 (57%), Gaps = 3/197 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D + + A+ GYRSR+S+KL+++++K ++ + V+DL +APGGW QVA V
Sbjct: 13 EHVNDPFVKKAQMDGYRSRSSYKLLEINAKDKLIQPTMTVMDLGSAPGGWSQVATDLVGH 72
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ D++P+ + G ++ D T+ + V+ + V D+V+ D +PN+ G
Sbjct: 73 KGRVIASDILPMDAVAGVEFIQGDFTENAVFEEIMAVLRDAKV---DVVISDMAPNISGV 129
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
A + + L+ ++ +A+Q L KG+FV KVF Y + +++ F+KV V KP +
Sbjct: 130 NAADQAASMYLIELALDMASQVLKSKGSFVAKVFHGGGYDGYVKAVREQFDKVVVRKPDS 189
Query: 187 SRSASAEIYLLGIKYKA 203
SR+ S E+YL+G ++
Sbjct: 190 SRARSREVYLVGKGFRG 206
>gi|334345476|ref|YP_004554028.1| ribosomal RNA large subunit methyltransferase E [Sphingobium
chlorophenolicum L-1]
gi|334102098|gb|AEG49522.1| Ribosomal RNA large subunit methyltransferase E [Sphingobium
chlorophenolicum L-1]
Length = 223
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 103/193 (53%), Gaps = 5/193 (2%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y R AK G+RSRA++KL++LD KF F++ S AV+DL APGGW QV + P V
Sbjct: 31 DPYVRRAKAEGWRSRAAFKLIELDEKFHFVKGSRAVVDLGVAPGGWAQVVRKLCPKAK-V 89
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL+P PI G + D + + + + + A DLV+ D + N G A +
Sbjct: 90 VGIDLLPTDPIPGVTLFQMDFMDDKAPVLLAEALGD----APDLVISDMAANTVGHAATD 145
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ LV + A + L GTFV KVF + +L LK+ F ++ KP ASR
Sbjct: 146 HLRTMGLVEAAAMFAVENLRKGGTFVAKVFAGGTDADLLAILKKHFTTIKHAKPPASRKG 205
Query: 191 SAEIYLLGIKYKA 203
S E Y++ +K
Sbjct: 206 SVEWYVVAQGFKG 218
>gi|221234624|ref|YP_002517060.1| 23S rRNA Um2552 2'-O-methyltransferase [Caulobacter crescentus
NA1000]
gi|220963796|gb|ACL95152.1| 23S rRNA Um2552 2'-O-methyltransferase [Caulobacter crescentus
NA1000]
Length = 236
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 108/194 (55%), Gaps = 8/194 (4%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D + A+ GYRSRA++K+ ++D KF F V+DL APGGW+Q+AV+R G
Sbjct: 49 DPFSAKARALGYRSRAAFKISEIDDKFHFFSKGAKVIDLGCAPGGWLQIAVER---GVTT 105
Query: 71 L-GLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQ 129
L G+DL+P+ P+ A LE D T +K++E G DLV+ D +PN G
Sbjct: 106 LAGIDLLPVDPVAPAHLLEMDFT---ADGAPEKLLELLGGEP-DLVMSDMAPNTVGHRET 161
Query: 130 EAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRS 189
+ + L+ + + A L P G FV K F+ + + ++ LK+ F+KV+ KP ASR
Sbjct: 162 DHLRIVGLIEIAAEFAIDVLKPGGAFVAKAFQGGETAEIIGKLKRHFDKVQHFKPKASRQ 221
Query: 190 ASAEIYLLGIKYKA 203
S+E++L+ +K
Sbjct: 222 DSSEVFLVATGFKG 235
>gi|395765708|ref|ZP_10446300.1| ribosomal RNA large subunit methyltransferase E [Bartonella sp.
DB5-6]
gi|395410903|gb|EJF77445.1| ribosomal RNA large subunit methyltransferase E [Bartonella sp.
DB5-6]
Length = 240
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 115/205 (56%), Gaps = 11/205 (5%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y +K GYRSRA++KL++++ ++ FL+ V+DL AAPGGW QVA + V
Sbjct: 41 RHLNDPYVHQSKIDGYRSRAAYKLIEINERYKFLKKGQKVIDLGAAPGGWCQVAGRL--V 98
Query: 67 GS-----LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
GS V+G+D +P+ P+ G V+LE D + +K+++ GV+ D+VL D +
Sbjct: 99 GSSNEKPSVVGIDYLPVDPLPGVVTLEIDFLHADAP---QKLIDALGVKP-DVVLSDMAA 154
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
G + + L + A L P+G F+ K F+ +++L LKQ F+ V
Sbjct: 155 PTTGHRRTDHLRTVHLCEVAADFALSVLKPRGHFLAKAFQGGTENTLLTTLKQNFKTVYH 214
Query: 182 DKPAASRSASAEIYLLGIKYKAPAK 206
KP +SR+ S E+YLL +++K K
Sbjct: 215 VKPPSSRAESVELYLLALEFKGKTK 239
>gi|329889243|ref|ZP_08267586.1| ftsJ-like methyltransferase family protein [Brevundimonas diminuta
ATCC 11568]
gi|328844544|gb|EGF94108.1| ftsJ-like methyltransferase family protein [Brevundimonas diminuta
ATCC 11568]
Length = 240
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 108/189 (57%), Gaps = 6/189 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D++ A+ G+RSRA++KL+++D KF ++ V+DL AAPGGW+QVA+ R + V
Sbjct: 55 DEWSDRARAEGWRSRAAFKLMEIDDKFRLIKRGSRVIDLGAAPGGWVQVALDR--GAAAV 112
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
G+DL+ I PI GA ++ D T P V + M + DLVL D + N G +
Sbjct: 113 AGVDLLMIEPIPGATLIQADFTDPG----VDQQMLDAIGGPPDLVLSDMAHNTVGHRQTD 168
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ AL+ + A + L P G FV+K F+ D VL L++ FE V+ KP +SR
Sbjct: 169 HLKIIALIEIAADFAIRTLRPGGNFVSKNFQGGDAGGVLTRLREEFETVKYVKPESSRKG 228
Query: 191 SAEIYLLGI 199
SAE++L+ +
Sbjct: 229 SAEVFLVAL 237
>gi|148702027|gb|EDL33974.1| Ftsj homolog 1 (E. coli), isoform CRA_c [Mus musculus]
Length = 310
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 117/213 (54%), Gaps = 20/213 (9%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYRLAKE+G+R+R+++KL+QLD +F + +DLCAAPG W QV
Sbjct: 1 MGRTS-KDKRDVYYRLAKENGWRARSAFKLLQLDEEFQLFKGVKRAVDLCAAPGSWSQVL 59
Query: 61 VQRV-PVGS-LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118
Q+V GS V+ +DL +AP+ G + ++ DIT+ + K++++ DLV+ D
Sbjct: 60 SQKVGGQGSGQVVAVDLQAMAPLPGVIQIQGDITQ---LSTAKEIIQHFEGCPADLVVCD 116
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
G+P+ G A ++ +AT L G FV K+FR +D + + L+ F
Sbjct: 117 GAPD--GKCA------------ALNIATHVLKLGGCFVAKIFRGRDVTLLYSQLRIFFSS 162
Query: 179 VEVDKPAASRSASAEIYLLGIKYKAPAKIDPRL 211
V KP +SR++S E + + Y P P L
Sbjct: 163 VLCAKPKSSRNSSIEAFAVCQGYDPPEGFIPDL 195
>gi|395491107|ref|ZP_10422686.1| 23S rRNA methyltransferase J [Sphingomonas sp. PAMC 26617]
gi|404251927|ref|ZP_10955895.1| 23S rRNA methyltransferase J [Sphingomonas sp. PAMC 26621]
Length = 224
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 109/196 (55%), Gaps = 11/196 (5%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y + AK G+RSRA++KL +LD +F FL+ V+DL APGGW QV ++VP ++V
Sbjct: 32 DPYVKRAKADGFRSRAAYKLSELDERFDFLKGKRHVVDLGIAPGGWAQVVRRQVPKAAIV 91
Query: 71 LGLDLVPIAPIRGAVSLEQDI---TKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAW 127
G+DL+P+ PI G L+ D PE ++M G A DLVL D + N G
Sbjct: 92 -GIDLLPVDPIDGVEILQLDFMDDVAPE------RLMAALG-GAPDLVLSDMAANTVGHP 143
Query: 128 AQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAAS 187
+A+ LV ++ A L P G FV KVF ++++ +K+ F V+ KP AS
Sbjct: 144 QTDALRTMGLVEAALDFAIDVLQPGGAFVGKVFAGGADTALVAEMKRNFTTVKHAKPPAS 203
Query: 188 RSASAEIYLLGIKYKA 203
R AS+E Y++ +K
Sbjct: 204 RKASSEWYVVAQGFKG 219
>gi|153209329|ref|ZP_01947348.1| ribosomal RNA large subunit methyltransferase J [Coxiella burnetii
'MSU Goat Q177']
gi|165924044|ref|ZP_02219876.1| ribosomal RNA large subunit methyltransferase J [Coxiella burnetii
Q321]
gi|212218759|ref|YP_002305546.1| 23S rRNA Um2552 2'-O-methyltransferase [Coxiella burnetii
CbuK_Q154]
gi|226703291|sp|B6J802.1|RLME_COXB1 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|120575400|gb|EAX32024.1| ribosomal RNA large subunit methyltransferase J [Coxiella burnetii
'MSU Goat Q177']
gi|165916503|gb|EDR35107.1| ribosomal RNA large subunit methyltransferase J [Coxiella burnetii
Q321]
gi|212013021|gb|ACJ20401.1| 23S rRNA Um2552 2'-O-methyltransferase [Coxiella burnetii
CbuK_Q154]
Length = 212
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 108/191 (56%), Gaps = 1/191 (0%)
Query: 8 HRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVG 67
H D Y + AK+ GY SRA++KL+++ K+ + S V+DL AAPGGW QVA V
Sbjct: 11 HEKDPYVKRAKKEGYPSRAAYKLLEIHQKYKLFKPSMNVIDLGAAPGGWSQVAKDLVGPK 70
Query: 68 SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRA-FDLVLHDGSPNVGGA 126
+V+ +DL+PI + + ++ D +PE +++ ++ + + DLV+ D +PN+ G
Sbjct: 71 GVVIAIDLLPIQSMLDVIFIQGDFNEPEIFNQLEAIVAKKTLTGQVDLVISDMAPNISGI 130
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ LV + A + LA GTF+ KVF+ L L+ F +V+ KP+A
Sbjct: 131 KNVDQSRSLHLVELAWDCAQKLLARGGTFLVKVFQGPGVDRFLINLRPYFNQVKFLKPSA 190
Query: 187 SRSASAEIYLL 197
SRS S+EIY+L
Sbjct: 191 SRSRSSEIYIL 201
>gi|429769254|ref|ZP_19301370.1| ribosomal RNA large subunit methyltransferase J [Brevundimonas
diminuta 470-4]
gi|429187601|gb|EKY28512.1| ribosomal RNA large subunit methyltransferase J [Brevundimonas
diminuta 470-4]
Length = 240
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 108/189 (57%), Gaps = 6/189 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D++ A+ G+RSRA++KL+++D KF ++ V+DL AAPGGW+QVA+ R + V
Sbjct: 55 DEWSDRARAEGWRSRAAFKLMEIDDKFRLIKRGSRVIDLGAAPGGWVQVALDR--GAAAV 112
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
G+DL+ I PI GA ++ D T P V + M + DLVL D + N G +
Sbjct: 113 AGVDLLMIEPIPGATLIQADFTDPG----VDQQMLDAIGGPPDLVLSDMAHNTIGHRQTD 168
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ AL+ + A + L P G FV+K F+ D VL L++ FE V+ KP +SR
Sbjct: 169 HLKIIALIEIAADFAIRTLRPGGNFVSKNFQGGDAGGVLTRLREEFETVKYVKPESSRKG 228
Query: 191 SAEIYLLGI 199
SAE++L+ +
Sbjct: 229 SAEVFLVAL 237
>gi|399907841|ref|ZP_10776393.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Halomonas sp. KM-1]
Length = 246
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 111/197 (56%), Gaps = 3/197 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D++ + + + GYRSRAS+KL+ LD K + +V+DL AAPGGW QVA RV
Sbjct: 53 EHFDDRFVQQSWQDGYRSRASYKLLALDEKDRLFKPGMSVIDLGAAPGGWSQVAADRVGP 112
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
+V+ D++ + + G ++ D T+ A ++ ++ R DLV+ D +PN+ G
Sbjct: 113 EGMVIASDILEMDALAGVEFIQGDFTE---EAVLEAILATLDGRPVDLVMSDMAPNMSGM 169
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
A + LV ++ LA Q L P G F+ KVF+ + + + L L++ F KV KP A
Sbjct: 170 SAIDQPQAMYLVELALDLARQTLRPGGRFLAKVFQGEGFDAYLKELRESFTKVVTRKPEA 229
Query: 187 SRSASAEIYLLGIKYKA 203
SR+ S E+YLL ++
Sbjct: 230 SRARSREVYLLADGFRG 246
>gi|319944197|ref|ZP_08018473.1| ribosomal RNA large subunit methyltransferase J [Lautropia
mirabilis ATCC 51599]
gi|319742492|gb|EFV94903.1| ribosomal RNA large subunit methyltransferase J [Lautropia
mirabilis ATCC 51599]
Length = 239
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 109/218 (50%), Gaps = 25/218 (11%)
Query: 8 HRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQR---- 63
H D Y +LA+ H YR+RA++KL+ +D + +R V+DL +APG W QV +R
Sbjct: 17 HLNDPYVKLAQRHHYRARAAFKLIGIDEQDHLIRPGMTVVDLGSAPGSWSQVVRRRLAAP 76
Query: 64 ------------------VPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVME 105
VP+ ++ LDL+P+ PI L+ D + + R++ +++
Sbjct: 77 NLAEDVRKADDLRGEAPQVPIQGRIVALDLLPMEPIPDVNYLQGDFREQDVLDRLEALLD 136
Query: 106 EHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDY 165
V DLVL D +PN+ G + L SV A+++L P G + KVF Y
Sbjct: 137 GGKV---DLVLSDMAPNLSGVGVADTARMQDLAELSVDFASRWLKPDGALLIKVFHGSGY 193
Query: 166 SSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKA 203
S ++ K F V+ KP ASR SAE YLLG + K+
Sbjct: 194 SQLVRLFKDHFAVVQPRKPKASRDRSAETYLLGRRLKS 231
>gi|431903056|gb|ELK09236.1| Putative ribosomal RNA methyltransferase 2 [Pteropus alecto]
Length = 257
Score = 116 bits (291), Expect = 5e-23, Method: Composition-based stats.
Identities = 74/210 (35%), Positives = 112/210 (53%), Gaps = 14/210 (6%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV-- 64
+H D + + AK YR R+++KL+++D K LR VLD AAPG W QV+VQRV
Sbjct: 51 RHLKDPFVKAAKLESYRCRSAFKLLEVDEKHRILRPGLRVLDCGAAPGAWSQVSVQRVNA 110
Query: 65 -------PVGSLVLGLDLVPIAPIRGAVSL-EQDITKPECRARVKKVMEEHGVRAFDLVL 116
PVG VLG+DL+ I+P+ GA L ++T P R+++++ G RA D++L
Sbjct: 111 AGTEPSTPVG-FVLGVDLLHISPLEGATFLCPANVTDPGTFQRIQELLP--GGRA-DVIL 166
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
D +PN G + L + + +A L P GTF+ K + + L + F
Sbjct: 167 SDMAPNATGIRGLDHDRIIGLCLSLLDMAPHILHPGGTFLCKTWAGSQSHRLQKRLTEEF 226
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAK 206
+ + KP ASR S+E+YLL +Y+ K
Sbjct: 227 QNTRIVKPEASRKESSEVYLLATQYRRAVK 256
>gi|403354542|gb|EJY76828.1| Ribosomal RNA large subunit methyltransferase E [Oxytricha
trifallax]
Length = 521
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 105/195 (53%), Gaps = 6/195 (3%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV-- 64
+H D + + AK YRSRA++KL+++D+KFS + V+D+ APGGW Q+ ++V
Sbjct: 28 RHLNDPFVKQAKLQAYRSRAAYKLMEIDNKFSIFKKGMKVIDVGCAPGGWSQIIAEKVDS 87
Query: 65 -PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNV 123
P +G+DL+ I P++G ++ DI K + + ++ + ++ + DL+L D P+
Sbjct: 88 QPGSETAVGVDLIEIIPVKGVKFIQGDIQKQDIQDKISEALD---FQKADLILSDAVPDF 144
Query: 124 GGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDK 183
G + M L +K + L P G + K+ + + K LF+ ++ K
Sbjct: 145 VGERYIDHMKSVNLNHLILKFCEKNLRPGGLLLMKIMQGPAEQDLFDYTKLLFDNLQRVK 204
Query: 184 PAASRSASAEIYLLG 198
P+ASR S EIYLLG
Sbjct: 205 PSASRQESKEIYLLG 219
>gi|94264071|ref|ZP_01287870.1| Ribosomal RNA methyltransferase RrmJ/FtsJ [delta proteobacterium
MLMS-1]
gi|93455487|gb|EAT05677.1| Ribosomal RNA methyltransferase RrmJ/FtsJ [delta proteobacterium
MLMS-1]
Length = 199
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 111/197 (56%), Gaps = 11/197 (5%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D YY AK+ GY +R+ +KL++ KF LR VLDL PGGW A ++V LV
Sbjct: 6 DHYYHRAKKEGYPARSVYKLIEAQQKFRLLRPGDRVLDLGCQPGGWSMFAAEQVGARGLV 65
Query: 71 LGLDL--VPIAPIRGAV--SLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP-NVGG 125
+G+DL PI P +GA + DI + ARV+++ ++ V +L D +P G
Sbjct: 66 VGVDLNPGPIRPRKGAPFHFVLGDINRESVLARVREITPDYTV-----LLSDMAPRTTGN 120
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
WA + S L + ++LA + LA G F KVF +D+ ++ +Q F KV++ KP
Sbjct: 121 RWADQQQSLR-LAREVLRLAGELLAAGGNFYCKVFEGEDFQELVADCRQRFAKVKIFKPK 179
Query: 186 ASRSASAEIYLLGIKYK 202
+SR+ S E+++LG+K+K
Sbjct: 180 SSRAESREVFVLGLKHK 196
>gi|254292202|ref|ZP_04962970.1| cell division protein FtsJ [Vibrio cholerae AM-19226]
gi|421350465|ref|ZP_15800831.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HE-25]
gi|150421883|gb|EDN13862.1| cell division protein FtsJ [Vibrio cholerae AM-19226]
gi|395954587|gb|EJH65197.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HE-25]
Length = 209
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 110/196 (56%), Gaps = 3/196 (1%)
Query: 8 HRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVG 67
H DKY AK+ GYRSRA +K+ ++ +K L++ V+DL AAPGGW Q A + V G
Sbjct: 17 HFDDKYVNEAKKKGYRSRAIFKIEEIQNKDKLLKAGMTVVDLGAAPGGWSQFAAKVVGEG 76
Query: 68 SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAW 127
V+ DL+P+ I G L+ D + A + +++ D+V+ D +PN+ G
Sbjct: 77 GRVIACDLLPMESIAGVSFLQGDFRE---EAVLNALLDRIQPDMVDVVMSDMAPNMAGNL 133
Query: 128 AQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAAS 187
+ + LV ++ + Q LAP G+FV KVF+ + + + ++ LF+ V++ KP +S
Sbjct: 134 SVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDDYVKAVRNLFKVVKIRKPDSS 193
Query: 188 RSASAEIYLLGIKYKA 203
RS S E++++ YK
Sbjct: 194 RSRSREVFIVATGYKG 209
>gi|433639801|ref|YP_007285561.1| 23S rRNA methylase [Halovivax ruber XH-70]
gi|433291605|gb|AGB17428.1| 23S rRNA methylase [Halovivax ruber XH-70]
Length = 269
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 108/206 (52%), Gaps = 12/206 (5%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D YY AK+ GYR+R+++KL QLD + VLDL AAPGGW+QVA +RV V
Sbjct: 5 DHYYNKAKQEGYRARSAYKLQQLDDLEGLIDRGDTVLDLGAAPGGWLQVAAERVGPEGTV 64
Query: 71 LGLDLVPIAPIRGAV-----SLEQDITKPECRARVKKVM-----EEHGVR-AFDLVLHDG 119
+G+D I + +L D+T+ + R+++ E +G R A D+VL D
Sbjct: 65 IGVDFQRIDGFDDEIDDRIETLRGDVTEAKTLDRIRRAAGASDGESNGERGAVDVVLSDM 124
Query: 120 SPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKV 179
+PNV G ++ + L + ++A + L GTF KVF D L+ F+ V
Sbjct: 125 APNVTGEYSLDQARSLHLARTASEVALELLETGGTFAAKVFEGPDVDDFRADLEDEFQYV 184
Query: 180 EVDKPAASRSASAEIYLLGI-KYKAP 204
P A+R S+E+YLLGI + AP
Sbjct: 185 RATVPKATRDESSELYLLGIGRLTAP 210
>gi|345801372|ref|XP_003434808.1| PREDICTED: putative ribosomal RNA methyltransferase 2 [Canis lupus
familiaris]
Length = 246
Score = 116 bits (291), Expect = 5e-23, Method: Composition-based stats.
Identities = 76/206 (36%), Positives = 110/206 (53%), Gaps = 14/206 (6%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV-- 64
+H D Y + AK YR R+++KL+++D + LR VLD AAPG W QVAVQRV
Sbjct: 37 RHLKDPYVKAAKVESYRCRSAFKLLEMDERHRILRPGLRVLDCGAAPGAWSQVAVQRVNA 96
Query: 65 -------PVGSLVLGLDLVPIAPIRGAVSL-EQDITKPECRARVKKVMEEHGVRAFDLVL 116
PVG VLG+DL+ I P+ GA L D+T P R+++++ G RA D++L
Sbjct: 97 AGTDPGTPVG-FVLGVDLLHIFPLEGATFLCPADVTDPGTLQRIQELLP--GGRA-DVIL 152
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
D +PN G + + L + + LA L P GTF+ K + ++ L F
Sbjct: 153 SDMAPNATGIHSLDHDRLIRLCLFLLDLAADVLHPGGTFLCKTWAGSQSLALQKRLTGQF 212
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYK 202
+ KP ASR S+E+YLL +Y+
Sbjct: 213 QSTRTIKPRASRKESSEVYLLATQYQ 238
>gi|118589174|ref|ZP_01546581.1| cell division protein ftsJ [Stappia aggregata IAM 12614]
gi|118438503|gb|EAV45137.1| cell division protein ftsJ [Stappia aggregata IAM 12614]
Length = 235
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 111/202 (54%), Gaps = 7/202 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV---G 67
D Y R AK GYRSRA++KL+++D K L+ + V+DL APGGW QVAVQRV
Sbjct: 37 DPYVRRAKMDGYRSRAAYKLIEIDDKHKLLKPGYRVVDLGCAPGGWCQVAVQRVQSSVDA 96
Query: 68 SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAW 127
V+G+D + + +RG L++D + A +ME G D+VL D + G
Sbjct: 97 PKVVGIDYLEMDHVRGTTFLQKDFLDDDAPA---ALMEALGGHKPDVVLSDMAAPTTGHK 153
Query: 128 AQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAAS 187
+ + L ++ A + L P G+F+ KVFR +++L+ LK+ F+ V KP AS
Sbjct: 154 QTDHLRTTHLFEIAIDFARRNLVPGGSFLAKVFRGGTENALLHDLKREFKSVAHIKPPAS 213
Query: 188 RSASAEIYLLGIKYKAPAKIDP 209
R S E+Y++ ++ + +DP
Sbjct: 214 RKESPELYVIAKGFRG-SDLDP 234
>gi|188582866|ref|YP_001926311.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylobacterium populi
BJ001]
gi|179346364|gb|ACB81776.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylobacterium populi
BJ001]
Length = 244
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 107/193 (55%), Gaps = 4/193 (2%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y AK GYRSRA++KL+++D +F L+ + ++DL AAPGGW QVA + V +
Sbjct: 45 DPYVARAKREGYRSRAAFKLIEIDERFKLLKPAQRIVDLGAAPGGWSQVAAKIVGESGRI 104
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL+ + P+ GA + D R+ +++ G +A DLVL D + N G +
Sbjct: 105 VGIDLLDVEPMAGATFITLDFLDDSAPERLTELL---GGKA-DLVLSDMAANTTGHKKTD 160
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ L + A + LAP G F+ KVF+ +L LK+ F V KPAASR+
Sbjct: 161 HLRTIGLAESAAAFAAEILAPGGAFLAKVFQGGTEGQLLADLKRDFATVRHVKPAASRAD 220
Query: 191 SAEIYLLGIKYKA 203
S+E+Y+L ++
Sbjct: 221 SSELYVLATGFRG 233
>gi|312884009|ref|ZP_07743726.1| 23S rRNA methyltransferase J [Vibrio caribbenthicus ATCC BAA-2122]
gi|309368467|gb|EFP96002.1| 23S rRNA methyltransferase J [Vibrio caribbenthicus ATCC BAA-2122]
Length = 209
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 114/202 (56%), Gaps = 3/202 (1%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
G+ +H DKY A++ GYRSRA +K+ ++ +K L+ + V+DL AAPGGW Q A
Sbjct: 11 GRWLKEHFDDKYANEARKKGYRSRAYFKIEEIQNKDKLLKPNMTVVDLGAAPGGWSQFAA 70
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
+ V ++ DL+P+ PI G L+ D A + ++E D+V+ D +P
Sbjct: 71 KIVGEKGQIIACDLLPMDPISGVSFLQGDFRD---EAVLDALLERISPEMVDVVMSDMAP 127
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
N+ G + + LV ++ + Q LAP G+FV KVF+ + + + + +++LF+ V+V
Sbjct: 128 NIAGNNSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDNFVKEVRELFKVVKV 187
Query: 182 DKPAASRSASAEIYLLGIKYKA 203
KP +SR+ S E++++ YK
Sbjct: 188 RKPDSSRARSREVFIVATGYKG 209
>gi|431931857|ref|YP_007244903.1| 23S rRNA methylase [Thioflavicoccus mobilis 8321]
gi|431830160|gb|AGA91273.1| 23S rRNA methylase [Thioflavicoccus mobilis 8321]
Length = 207
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 108/196 (55%), Gaps = 3/196 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y A++ GYRSRA++KL++L K L VLDL AAPGGW QVA Q V
Sbjct: 15 RHFNDDYVIRAQKLGYRSRAAFKLLELQEKDRLLGRGMRVLDLGAAPGGWSQVATQLVGP 74
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
+V+ LDL+ I + G V L+ D A + ++M+ G D+VL D +PN+ G
Sbjct: 75 RGIVVALDLLAIESLPGVVILQGDFRD---EAVLAELMQALGEAPLDVVLSDMAPNISGI 131
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
A + L ++ A Q L P G V K+F+ + + ++L ++ LF V V KPAA
Sbjct: 132 AAVDQPRAALLGELALDCARQVLKPGGALVVKMFQGEGFDALLGDMRGLFRSVAVRKPAA 191
Query: 187 SRSASAEIYLLGIKYK 202
SR+ S E YL+ ++
Sbjct: 192 SRANSRECYLVAKGFR 207
>gi|119774090|ref|YP_926830.1| 23S rRNA methyltransferase J [Shewanella amazonensis SB2B]
gi|143461617|sp|A1S454.1|RLME_SHEAM RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|119766590|gb|ABL99160.1| ribosomal RNA large subunit methyltransferase J [Shewanella
amazonensis SB2B]
Length = 209
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 111/196 (56%), Gaps = 3/196 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y +LA++ G RSRA++KL +L K ++ V+DL AAPGGW QVAV+ V
Sbjct: 16 EHFDDHYVKLAQKRGLRSRAAFKLEELQEKDHLIKPGMTVVDLGAAPGGWSQVAVKLVGD 75
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ D++P+ PI G L+ D + A + ++E G D+VL D +PN+ G+
Sbjct: 76 RGKVIACDILPMDPIVGVDFLQGDFRED---AVLNALLERVGDEKVDVVLSDMAPNMSGS 132
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ LV ++ + Q LAP G+F KVF+ + + + +++ F+ V+ KP +
Sbjct: 133 DGVDQPRAMYLVELALDMCHQVLAPNGSFAVKVFQGEGFDEYMKAVREAFKVVKTRKPDS 192
Query: 187 SRSASAEIYLLGIKYK 202
SR+ S E+YL+ YK
Sbjct: 193 SRARSREVYLVATGYK 208
>gi|334139955|ref|YP_004533155.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Novosphingobium sp.
PP1Y]
gi|359398875|ref|ZP_09191890.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Novosphingobium
pentaromativorans US6-1]
gi|333937979|emb|CCA91337.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Novosphingobium sp.
PP1Y]
gi|357599818|gb|EHJ61522.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Novosphingobium
pentaromativorans US6-1]
Length = 219
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 100/193 (51%), Gaps = 5/193 (2%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y + AK GYRSRA++KL++LD KF + +DL APGGW QV + P V
Sbjct: 32 DPYVKKAKADGYRSRAAYKLIELDEKFGLFKGVTRAVDLGIAPGGWSQVLRLKCPRAK-V 90
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL+P PI G E D E A ++ ++ A +LVL D + N G +
Sbjct: 91 VGIDLLPTDPIEGVTIFEMDFMADEAPAALEGALDG----APELVLSDMAANTVGHKQTD 146
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ LV + A Q LAP GTFV KV + +L LK+ F V+ KP ASR
Sbjct: 147 HLRTMGLVETAADFAIQTLAPGGTFVAKVLAGGTDTELLNLLKRHFTSVKHAKPPASRKD 206
Query: 191 SAEIYLLGIKYKA 203
S+E Y++ +K
Sbjct: 207 SSEWYVIAKGFKG 219
>gi|360043701|emb|CCD81247.1| putative ribosomal RNA methyltransferase [Schistosoma mansoni]
Length = 343
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 122/217 (56%), Gaps = 17/217 (7%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHA----VLDLCAAPGGW 56
MGK + + D YYRLAKE G+R+R+++KL+Q+D ++ + + V+DLCAAPG W
Sbjct: 1 MGK-SSRDKRDIYYRLAKEEGWRARSAYKLLQIDDEYGIFSTENTPLERVVDLCAAPGSW 59
Query: 57 MQVAVQRV--------PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHG 108
QV +R+ ++ +DL +API G + ++ DIT + +++++
Sbjct: 60 SQVLSKRLWESKSPEDQKSVKIVAVDLQAMAPIPGVIQIQGDITSQD---TAQQIIKHFD 116
Query: 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSV 168
+ LV+ DG+P+V G + Q+ L++ +V + ++ L GTFV KVFR +D +
Sbjct: 117 GKLAQLVVCDGAPDVTGLHDLDEYVQSHLILAAVTICSRVLELGGTFVAKVFRGRDSGLL 176
Query: 169 LYCLKQLFE-KVEVDKPAASRSASAEIYLLGIKYKAP 204
L+ LF +V KP ASR++S E +++ + P
Sbjct: 177 GSQLRCLFSGEVSFAKPRASRNSSLESFVICRGFMGP 213
>gi|221134032|ref|ZP_03560337.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Glaciecola sp. HTCC2999]
Length = 206
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 105/196 (53%), Gaps = 3/196 (1%)
Query: 8 HRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVG 67
H D Y + A+ GYRSRAS+KL++++ K +R + V+DL +APGGW QV V
Sbjct: 14 HLNDPYVKKAQVDGYRSRASYKLIEINEKDQLVRPGNIVMDLGSAPGGWSQVLAPMVGDA 73
Query: 68 SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAW 127
V+ D++P+ I G L+ D T A +++E G D V+ D +PN+ G
Sbjct: 74 GRVIASDILPMDSIVGVSFLQGDFTD---EAVYNAILKELGDDRVDTVVSDMAPNLSGNN 130
Query: 128 AQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAAS 187
+ S LV ++ +A L P G F KVF+ Y + ++Q F KV + KPAAS
Sbjct: 131 TTDQYSSIYLVELALDMARNVLKPGGGFCAKVFQGVGYEEYVKEVRQSFSKVIIRKPAAS 190
Query: 188 RSASAEIYLLGIKYKA 203
R S E+Y++G +K
Sbjct: 191 RPRSREVYVVGKGFKG 206
>gi|429210168|ref|ZP_19201335.1| ribosomal RNA large subunit methyltransferase E [Pseudomonas sp.
M1]
gi|428158942|gb|EKX05488.1| ribosomal RNA large subunit methyltransferase E [Pseudomonas sp.
M1]
Length = 207
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 114/209 (54%), Gaps = 9/209 (4%)
Query: 1 MGKVKGKHRL------DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPG 54
M + K HR D Y ++A+ GYRSRAS+KL+++ K LR V+DL AAPG
Sbjct: 1 MARSKTSHRWLKEHFDDPYVKMAQRDGYRSRASYKLLEIQEKDRILRPGMTVVDLGAAPG 60
Query: 55 GWMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114
GW QV + + ++ D++P+ I ++ D T+ E AR+ + + E+ V DL
Sbjct: 61 GWSQVTSRVIGDKGTLIASDILPMDSIPDVTFIQGDFTEDEVFARLLEAIGENPV---DL 117
Query: 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQ 174
V+ D +PN+ G A + L ++ L + L P G F+ K+F+ + + + L +++
Sbjct: 118 VISDMAPNMSGLPAVDMPRAMFLCELALDLCARVLRPGGDFLIKIFQGEGFDTYLKTVRE 177
Query: 175 LFEKVEVDKPAASRSASAEIYLLGIKYKA 203
FEKV++ KP +SR S E YLL ++
Sbjct: 178 NFEKVQMRKPLSSRDRSREQYLLARGFRG 206
>gi|15640656|ref|NP_230285.1| 23S rRNA methyltransferase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121730106|ref|ZP_01682507.1| cell division protein FtsJ [Vibrio cholerae V52]
gi|147673945|ref|YP_001216130.1| 23S rRNA methyltransferase J [Vibrio cholerae O395]
gi|153820567|ref|ZP_01973234.1| cell division protein FtsJ [Vibrio cholerae NCTC 8457]
gi|153830952|ref|ZP_01983619.1| cell division protein FtsJ [Vibrio cholerae 623-39]
gi|227080817|ref|YP_002809368.1| 23S rRNA methyltransferase J [Vibrio cholerae M66-2]
gi|227117011|ref|YP_002818907.1| cell division protein FtsJ [Vibrio cholerae O395]
gi|254850870|ref|ZP_05240220.1| cell division protein FtsJ [Vibrio cholerae MO10]
gi|255744147|ref|ZP_05418100.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholera CIRS 101]
gi|262155721|ref|ZP_06028845.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae INDRE 91/1]
gi|262189675|ref|ZP_06048049.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae CT 5369-93]
gi|297580762|ref|ZP_06942688.1| ribosomal RNA large subunit methyltransferase J [Vibrio cholerae
RC385]
gi|298500752|ref|ZP_07010555.1| ribosomal RNA large subunit methyltransferase J [Vibrio cholerae
MAK 757]
gi|360034452|ref|YP_004936215.1| 23S rRNA methyltransferase J [Vibrio cholerae O1 str. 2010EL-1786]
gi|379740495|ref|YP_005332464.1| 23S rRNA methyltransferase J [Vibrio cholerae IEC224]
gi|417812598|ref|ZP_12459258.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-49A2]
gi|417815461|ref|ZP_12462095.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HCUF01]
gi|417819490|ref|ZP_12466107.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HE39]
gi|417823757|ref|ZP_12470349.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HE48]
gi|418331604|ref|ZP_12942546.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-06A1]
gi|418336479|ref|ZP_12945378.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-23A1]
gi|418342861|ref|ZP_12949657.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-28A1]
gi|418348022|ref|ZP_12952758.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-43A1]
gi|418354363|ref|ZP_12957087.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-61A1]
gi|419825104|ref|ZP_14348610.1| ftsJ-like methyltransferase family protein [Vibrio cholerae
CP1033(6)]
gi|419829182|ref|ZP_14352670.1| ftsJ-like methyltransferase family protein [Vibrio cholerae HC-1A2]
gi|419831978|ref|ZP_14355443.1| ftsJ-like methyltransferase family protein [Vibrio cholerae
HC-61A2]
gi|419835556|ref|ZP_14359001.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-46B1]
gi|421315726|ref|ZP_15766298.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
CP1032(5)]
gi|421319403|ref|ZP_15769962.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
CP1038(11)]
gi|421323450|ref|ZP_15773979.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
CP1041(14)]
gi|421327855|ref|ZP_15778371.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
CP1042(15)]
gi|421330862|ref|ZP_15781344.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
CP1046(19)]
gi|421334444|ref|ZP_15784913.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
CP1048(21)]
gi|421338341|ref|ZP_15788779.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-20A2]
gi|421342057|ref|ZP_15792464.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-43B1]
gi|421346659|ref|ZP_15797042.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-46A1]
gi|421353444|ref|ZP_15803777.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HE-45]
gi|422306043|ref|ZP_16393229.1| ftsJ-like methyltransferase family protein [Vibrio cholerae
CP1035(8)]
gi|422890675|ref|ZP_16933089.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-40A1]
gi|422901543|ref|ZP_16936908.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-48A1]
gi|422905762|ref|ZP_16940608.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-70A1]
gi|422909150|ref|ZP_16943802.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HE-09]
gi|422912360|ref|ZP_16946887.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HFU-02]
gi|422916348|ref|ZP_16950686.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-02A1]
gi|422921860|ref|ZP_16955066.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
BJG-01]
gi|422924842|ref|ZP_16957873.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-38A1]
gi|423144163|ref|ZP_17131778.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-19A1]
gi|423148867|ref|ZP_17136227.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-21A1]
gi|423152658|ref|ZP_17139857.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-22A1]
gi|423155440|ref|ZP_17142577.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-32A1]
gi|423159303|ref|ZP_17146276.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-33A2]
gi|423163988|ref|ZP_17150776.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-48B2]
gi|423730114|ref|ZP_17703433.1| ftsJ-like methyltransferase family protein [Vibrio cholerae
HC-17A1]
gi|423733919|ref|ZP_17707135.1| ftsJ-like methyltransferase family protein [Vibrio cholerae
HC-41B1]
gi|423748278|ref|ZP_17711512.1| ftsJ-like methyltransferase family protein [Vibrio cholerae
HC-50A2]
gi|423817259|ref|ZP_17715290.1| ftsJ-like methyltransferase family protein [Vibrio cholerae
HC-55C2]
gi|423849294|ref|ZP_17719076.1| ftsJ-like methyltransferase family protein [Vibrio cholerae
HC-59A1]
gi|423878948|ref|ZP_17722683.1| ftsJ-like methyltransferase family protein [Vibrio cholerae
HC-60A1]
gi|423891835|ref|ZP_17725523.1| ftsJ-like methyltransferase family protein [Vibrio cholerae
HC-62A1]
gi|423926609|ref|ZP_17730138.1| ftsJ-like methyltransferase family protein [Vibrio cholerae
HC-77A1]
gi|423947594|ref|ZP_17733553.1| ftsJ-like methyltransferase family protein [Vibrio cholerae HE-40]
gi|423976864|ref|ZP_17737101.1| ftsJ-like methyltransferase family protein [Vibrio cholerae HE-46]
gi|423996770|ref|ZP_17740033.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-02C1]
gi|424001166|ref|ZP_17744256.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-17A2]
gi|424005324|ref|ZP_17748309.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-37A1]
gi|424008204|ref|ZP_17751154.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-44C1]
gi|424015472|ref|ZP_17755319.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-55B2]
gi|424020583|ref|ZP_17760363.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-59B1]
gi|424023333|ref|ZP_17762998.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-62B1]
gi|424026136|ref|ZP_17765753.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-69A1]
gi|424585541|ref|ZP_18025135.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
CP1030(3)]
gi|424589881|ref|ZP_18029328.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
CP1037(10)]
gi|424594158|ref|ZP_18033497.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
CP1040(13)]
gi|424598099|ref|ZP_18037297.1| ribosomal RNA large subunit methyltransferase E [Vibrio Cholerae
CP1044(17)]
gi|424600856|ref|ZP_18040013.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
CP1047(20)]
gi|424605751|ref|ZP_18044717.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
CP1050(23)]
gi|424609588|ref|ZP_18048447.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-39A1]
gi|424612390|ref|ZP_18051198.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-41A1]
gi|424616267|ref|ZP_18054959.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-42A1]
gi|424621146|ref|ZP_18059675.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-47A1]
gi|424623951|ref|ZP_18062428.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-50A1]
gi|424628526|ref|ZP_18066832.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-51A1]
gi|424632487|ref|ZP_18070603.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-52A1]
gi|424635572|ref|ZP_18073593.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-55A1]
gi|424639486|ref|ZP_18077382.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-56A1]
gi|424644123|ref|ZP_18081878.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-56A2]
gi|424647645|ref|ZP_18085322.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-57A1]
gi|424651769|ref|ZP_18089294.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-57A2]
gi|424655716|ref|ZP_18093019.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-81A2]
gi|424658505|ref|ZP_18095762.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HE-16]
gi|429887867|ref|ZP_19369372.1| Cell division protein FtsJ / Ribosomal RNA large subunit
methyltransferase E LSU rRNA Um2552 [Vibrio cholerae
PS15]
gi|440708840|ref|ZP_20889500.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae 4260B]
gi|443502664|ref|ZP_21069654.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-64A1]
gi|443506578|ref|ZP_21073369.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-65A1]
gi|443510684|ref|ZP_21077349.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-67A1]
gi|443514244|ref|ZP_21080784.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-68A1]
gi|443518059|ref|ZP_21084477.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-71A1]
gi|443522926|ref|ZP_21089167.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-72A2]
gi|443528469|ref|ZP_21094503.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-78A1]
gi|443530544|ref|ZP_21096560.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-7A1]
gi|443534319|ref|ZP_21100232.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-80A1]
gi|443537895|ref|ZP_21103752.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-81A1]
gi|449054141|ref|ZP_21732809.1| Cell division protein FtsJ/Ribosomal RNA large subunit
methyltransferase E [Vibrio cholerae O1 str. Inaba
G4222]
gi|81545365|sp|Q9KU87.1|RLME_VIBCH RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|189040344|sp|A5F937.1|RLME_VIBC3 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|254809561|sp|C3LSP1.1|RLME_VIBCM RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|9655071|gb|AAF93802.1| cell division protein FtsJ [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121628141|gb|EAX60673.1| cell division protein FtsJ [Vibrio cholerae V52]
gi|126508889|gb|EAZ71483.1| cell division protein FtsJ [Vibrio cholerae NCTC 8457]
gi|146315828|gb|ABQ20367.1| cell division protein FtsJ [Vibrio cholerae O395]
gi|148873565|gb|EDL71700.1| cell division protein FtsJ [Vibrio cholerae 623-39]
gi|227008705|gb|ACP04917.1| cell division protein FtsJ [Vibrio cholerae M66-2]
gi|227012461|gb|ACP08671.1| cell division protein FtsJ [Vibrio cholerae O395]
gi|254846575|gb|EET24989.1| cell division protein FtsJ [Vibrio cholerae MO10]
gi|255738087|gb|EET93479.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholera CIRS 101]
gi|262030432|gb|EEY49072.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae INDRE 91/1]
gi|262034441|gb|EEY52807.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae CT 5369-93]
gi|297535178|gb|EFH74013.1| ribosomal RNA large subunit methyltransferase J [Vibrio cholerae
RC385]
gi|297540533|gb|EFH76591.1| ribosomal RNA large subunit methyltransferase J [Vibrio cholerae
MAK 757]
gi|340041346|gb|EGR02313.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HE39]
gi|340043447|gb|EGR04406.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HCUF01]
gi|340043978|gb|EGR04935.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-49A2]
gi|340048386|gb|EGR09308.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HE48]
gi|341625110|gb|EGS50579.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-70A1]
gi|341626329|gb|EGS51724.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-48A1]
gi|341626909|gb|EGS52249.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-40A1]
gi|341635740|gb|EGS60446.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HE-09]
gi|341640200|gb|EGS64791.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-02A1]
gi|341640926|gb|EGS65501.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HFU-02]
gi|341647802|gb|EGS71878.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
BJG-01]
gi|341648469|gb|EGS72529.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-38A1]
gi|356420631|gb|EHH74150.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-06A1]
gi|356421491|gb|EHH74992.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-21A1]
gi|356426114|gb|EHH79448.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-19A1]
gi|356433260|gb|EHH86453.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-23A1]
gi|356434441|gb|EHH87620.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-22A1]
gi|356437906|gb|EHH90977.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-28A1]
gi|356443107|gb|EHH95939.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-32A1]
gi|356448133|gb|EHI00918.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-43A1]
gi|356450140|gb|EHI02872.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-33A2]
gi|356454139|gb|EHI06794.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-61A1]
gi|356456280|gb|EHI08888.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-48B2]
gi|356645606|gb|AET25661.1| 23S rRNA methyltransferase J [Vibrio cholerae O1 str. 2010EL-1786]
gi|378794005|gb|AFC57476.1| 23S rRNA methyltransferase J [Vibrio cholerae IEC224]
gi|395922467|gb|EJH33283.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
CP1032(5)]
gi|395923295|gb|EJH34107.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
CP1041(14)]
gi|395925728|gb|EJH36525.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
CP1038(11)]
gi|395931589|gb|EJH42334.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
CP1042(15)]
gi|395934715|gb|EJH45453.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
CP1046(19)]
gi|395937553|gb|EJH48267.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
CP1048(21)]
gi|395945461|gb|EJH56127.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-20A2]
gi|395945560|gb|EJH56225.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-43B1]
gi|395946807|gb|EJH57467.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-46A1]
gi|395954791|gb|EJH65400.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HE-45]
gi|395962625|gb|EJH72919.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-56A2]
gi|395963752|gb|EJH74009.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-57A2]
gi|395966573|gb|EJH76691.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-42A1]
gi|395974808|gb|EJH84322.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-47A1]
gi|395977387|gb|EJH86797.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
CP1030(3)]
gi|395979076|gb|EJH88440.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
CP1047(20)]
gi|408009674|gb|EKG47574.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-39A1]
gi|408015757|gb|EKG53330.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-50A1]
gi|408016532|gb|EKG54076.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-41A1]
gi|408020689|gb|EKG57976.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-52A1]
gi|408026688|gb|EKG63683.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-56A1]
gi|408027123|gb|EKG64105.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-55A1]
gi|408036122|gb|EKG72569.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
CP1037(10)]
gi|408036702|gb|EKG73123.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-57A1]
gi|408037136|gb|EKG73542.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
CP1040(13)]
gi|408044691|gb|EKG80587.1| ribosomal RNA large subunit methyltransferase E [Vibrio Cholerae
CP1044(17)]
gi|408046648|gb|EKG82324.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
CP1050(23)]
gi|408054989|gb|EKG89943.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HE-16]
gi|408057148|gb|EKG92012.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-81A2]
gi|408058732|gb|EKG93518.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-51A1]
gi|408611375|gb|EKK84736.1| ftsJ-like methyltransferase family protein [Vibrio cholerae
CP1033(6)]
gi|408621816|gb|EKK94808.1| ftsJ-like methyltransferase family protein [Vibrio cholerae HC-1A2]
gi|408627325|gb|EKL00141.1| ftsJ-like methyltransferase family protein [Vibrio cholerae
HC-17A1]
gi|408627426|gb|EKL00234.1| ftsJ-like methyltransferase family protein [Vibrio cholerae
CP1035(8)]
gi|408631689|gb|EKL04217.1| ftsJ-like methyltransferase family protein [Vibrio cholerae
HC-41B1]
gi|408636482|gb|EKL08619.1| ftsJ-like methyltransferase family protein [Vibrio cholerae
HC-55C2]
gi|408640842|gb|EKL12625.1| ftsJ-like methyltransferase family protein [Vibrio cholerae
HC-50A2]
gi|408643656|gb|EKL15373.1| ftsJ-like methyltransferase family protein [Vibrio cholerae
HC-60A1]
gi|408644693|gb|EKL16367.1| ftsJ-like methyltransferase family protein [Vibrio cholerae
HC-59A1]
gi|408651879|gb|EKL23118.1| ftsJ-like methyltransferase family protein [Vibrio cholerae
HC-61A2]
gi|408658678|gb|EKL29744.1| ftsJ-like methyltransferase family protein [Vibrio cholerae
HC-77A1]
gi|408659339|gb|EKL30390.1| ftsJ-like methyltransferase family protein [Vibrio cholerae
HC-62A1]
gi|408661583|gb|EKL32567.1| ftsJ-like methyltransferase family protein [Vibrio cholerae HE-40]
gi|408666078|gb|EKL36880.1| ftsJ-like methyltransferase family protein [Vibrio cholerae HE-46]
gi|408848339|gb|EKL88388.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-37A1]
gi|408849164|gb|EKL89194.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-17A2]
gi|408854148|gb|EKL93912.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-02C1]
gi|408858969|gb|EKL98639.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-46B1]
gi|408861828|gb|EKM01395.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-55B2]
gi|408866074|gb|EKM05463.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-44C1]
gi|408866448|gb|EKM05828.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-59B1]
gi|408873455|gb|EKM12652.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-62B1]
gi|408881295|gb|EKM20199.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-69A1]
gi|429225035|gb|EKY31321.1| Cell division protein FtsJ / Ribosomal RNA large subunit
methyltransferase E LSU rRNA Um2552 [Vibrio cholerae
PS15]
gi|439975581|gb|ELP51693.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae 4260B]
gi|443433055|gb|ELS75575.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-64A1]
gi|443436844|gb|ELS82960.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-65A1]
gi|443440406|gb|ELS90094.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-67A1]
gi|443444501|gb|ELS97774.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-68A1]
gi|443448337|gb|ELT04971.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-71A1]
gi|443451112|gb|ELT11375.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-72A2]
gi|443453043|gb|ELT16876.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-78A1]
gi|443458745|gb|ELT26140.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-7A1]
gi|443462477|gb|ELT33515.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-80A1]
gi|443466720|gb|ELT41377.1| ribosomal RNA large subunit methyltransferase E [Vibrio cholerae
HC-81A1]
gi|448266376|gb|EMB03603.1| Cell division protein FtsJ/Ribosomal RNA large subunit
methyltransferase E [Vibrio cholerae O1 str. Inaba
G4222]
Length = 209
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 111/197 (56%), Gaps = 3/197 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H DKY AK+ GYRSRA +K+ ++ +K L++ V+DL AAPGGW Q A + V
Sbjct: 16 EHFDDKYVNEAKKKGYRSRAIFKIEEIQNKDKLLKAGMTVVDLGAAPGGWSQFAAKVVGE 75
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
G V+ DL+P+ I G L+ D + A + +++ D+V+ D +PN+ G
Sbjct: 76 GGRVIACDLLPMESIAGVSFLQGDFRE---EAVLNALLDRIQPDMVDVVMSDMAPNMAGN 132
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ + LV ++ + Q LAP G+FV KVF+ + + + ++ LF+ V++ KP +
Sbjct: 133 LSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDDYVKAVRDLFKVVKIRKPDS 192
Query: 187 SRSASAEIYLLGIKYKA 203
SRS S E++++ YK
Sbjct: 193 SRSRSREVFIVATGYKG 209
>gi|428180442|gb|EKX49309.1| hypothetical protein GUITHDRAFT_104837 [Guillardia theta CCMP2712]
Length = 255
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 117/206 (56%), Gaps = 5/206 (2%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H DK+ + A++ G+RSRA++K++Q+ K S + VLDL +APG W QVA +RV
Sbjct: 15 EHVNDKWVKQAQQDGWRSRAAYKILQIQEKDSIFKPGQLVLDLGSAPGSWSQVASKRVLP 74
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNV-GG 125
V+ D++ + P+ G ++ D T+ R ++ ++ G RA D+VL D +PN+ G
Sbjct: 75 TGRVIATDILEMRPLPGVEFVQGDFTEDTTRGQLSVML--AGARA-DVVLSDMAPNLSGN 131
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
A + + N LV + + ++L G V KVFR + Y L ++ F +V+V KP
Sbjct: 132 ALLDQGRAYN-LVSLAFFMMEEWLKRGGKAVVKVFRGEGYDECLNEMRARFNEVKVRKPE 190
Query: 186 ASRSASAEIYLLGIKYKAPAKIDPRL 211
ASR S EI+L+GI +K +I L
Sbjct: 191 ASRGRSTEIFLVGIGFKGAGEIQAGL 216
>gi|304310499|ref|YP_003810097.1| cell division protein FtsJ [gamma proteobacterium HdN1]
gi|301796232|emb|CBL44440.1| Cell division protein FtsJ [gamma proteobacterium HdN1]
Length = 206
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 109/195 (55%), Gaps = 3/195 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y + A++ GYRSRA++KL+++ K L+ VLDL AAPGGW QVA + V
Sbjct: 13 EHFDDPYVKKAQQDGYRSRAAYKLLEIQEKDRILKQGMTVLDLGAAPGGWSQVAARYVGD 72
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ D + + P+ G L+ D + E A K+++ G R DLV+ D +PN+ G
Sbjct: 73 AGHVIASDRLEMDPLYGVDFLQGDFCEEEVFA---KLLQMTGNRGIDLVISDMAPNMSGN 129
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
A + LV ++ +AT+ L P G+ + KVF+ + + S+ + F +++ KP A
Sbjct: 130 RAVDQPRAMYLVELALDMATRVLKPGGSLLVKVFQGEGFDSLRKDMHTHFRQLQTRKPDA 189
Query: 187 SRSASAEIYLLGIKY 201
SRS SAE Y L Y
Sbjct: 190 SRSRSAETYWLAKDY 204
>gi|224823864|ref|ZP_03696973.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Pseudogulbenkiania
ferrooxidans 2002]
gi|347541233|ref|YP_004848659.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Pseudogulbenkiania sp.
NH8B]
gi|224604319|gb|EEG10493.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Pseudogulbenkiania
ferrooxidans 2002]
gi|345644412|dbj|BAK78245.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Pseudogulbenkiania sp.
NH8B]
Length = 205
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 106/192 (55%), Gaps = 3/192 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y +A++ GYR+RA++KL++++ K +R + DL +APG W QVA + V
Sbjct: 13 EHVHDHYVHMAQKDGYRARAAYKLLEINDKDKLIRPGTVLADLGSAPGSWSQVAARLVGD 72
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V LD++P+ PI ++ D + E + ++ G R DLV+ D +PN+ G
Sbjct: 73 KGKVYALDILPMNPIADVEFIQGDFREQEVLDQFVALL---GGRELDLVISDMAPNISGM 129
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
A + L +++ L P G+F+ KVF+ D+ L +++LF++V KP A
Sbjct: 130 SAIDQARSFHLCELALEFVRDHLKPGGSFLVKVFQGSDFQPYLKSMRELFDEVVSRKPKA 189
Query: 187 SRSASAEIYLLG 198
SR S EIYLLG
Sbjct: 190 SRDRSTEIYLLG 201
>gi|448376549|ref|ZP_21559641.1| 23S rRNA methyltransferase J [Halovivax asiaticus JCM 14624]
gi|445657131|gb|ELZ09962.1| 23S rRNA methyltransferase J [Halovivax asiaticus JCM 14624]
Length = 270
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 108/207 (52%), Gaps = 13/207 (6%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D YY AK+ GYR+R+++KL QLD + VLDL AAPGGW+QVA +RV V
Sbjct: 5 DHYYNKAKQEGYRARSAYKLQQLDDLEGLIDRGDTVLDLGAAPGGWLQVAAERVGPEGTV 64
Query: 71 LGLDLVPIAPIRGAV-----SLEQDITKPECRARVKKVM-----EEHGVR--AFDLVLHD 118
+G+D I + +L D+T+ + R+++ E +G R A D+VL D
Sbjct: 65 IGVDFQRIDGFDDEIDDRIETLRGDVTETKTLDRIRRAAGASDGESNGERGGAVDVVLSD 124
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
+PNV G ++ + L + ++A + L GTF KVF D L+ F+
Sbjct: 125 MAPNVTGEYSLDQARSLHLARTASEVALELLETGGTFAAKVFEGPDVDDFRADLEDEFQY 184
Query: 179 VEVDKPAASRSASAEIYLLGI-KYKAP 204
V P A+R S+E+YLLGI + AP
Sbjct: 185 VRATVPNATRDESSELYLLGIGRLTAP 211
>gi|83644093|ref|YP_432528.1| 23S rRNA methylase [Hahella chejuensis KCTC 2396]
gi|123534482|sp|Q2SMM1.1|RLME_HAHCH RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|83632136|gb|ABC28103.1| 23S rRNA methylase [Hahella chejuensis KCTC 2396]
Length = 206
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 105/197 (53%), Gaps = 3/197 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y + +KE G+RSRAS+KL++LD + LR V+DL AAPGGW QV V
Sbjct: 13 EHHSDVYVKKSKEDGFRSRASYKLIELDRQDKLLRPGMTVIDLGAAPGGWSQVVADVVGD 72
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ DL+ + I G + D T+ E + ++ E R DLV+ D +PN+ G
Sbjct: 73 QGKVVACDLLSMDSIAGVTFFQGDFTEDE---MLDAILNEVNSRPVDLVISDMAPNMSGM 129
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ + LV ++ LA + L G FV KVF+ + + +L + F V + KP A
Sbjct: 130 KSVDIPKAMYLVELALDLACRVLKKNGCFVAKVFQGEGFDQILQESRGRFSSVNIRKPDA 189
Query: 187 SRSASAEIYLLGIKYKA 203
SR+ S EIYL+ ++
Sbjct: 190 SRARSREIYLVAKGFRG 206
>gi|345006507|ref|YP_004809360.1| ribosomal RNA large subunit methyltransferase E [halophilic
archaeon DL31]
gi|344322133|gb|AEN06987.1| Ribosomal RNA large subunit methyltransferase E [halophilic
archaeon DL31]
Length = 260
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 108/197 (54%), Gaps = 9/197 (4%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D YY AK+ GYR+R+++KL QLD + + V+DL AAPGGW+QVA ++V V
Sbjct: 5 DDYYNRAKQQGYRARSAYKLKQLDEEATLFEEGDTVVDLGAAPGGWLQVAAEKVGPQGRV 64
Query: 71 LGLDLVPIAPI--RGAVSLEQDITKPECRARVKKVMEEHGV----RAFDLVLHDGSPNVG 124
+G+D I + ++ D+T+ + R R+++ E GV R D+V+ D +PN+
Sbjct: 65 VGVDFQSIDDLEPHQVKTMRGDMTEEQTRDRLRR---ELGVEDDERVVDVVISDMAPNMT 121
Query: 125 GAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKP 184
G + + L + + A ++L P FV KVF+ +D ++ F+ V P
Sbjct: 122 GEYELDHARSVHLARTAFETALKYLKPDSDFVVKVFQGRDLDEFRSDVEAEFQYVRTIAP 181
Query: 185 AASRSASAEIYLLGIKY 201
ASR AS+E+YL+G Y
Sbjct: 182 PASRDASSEVYLVGKGY 198
>gi|221066109|ref|ZP_03542214.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Comamonas testosteroni
KF-1]
gi|264679344|ref|YP_003279251.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Comamonas testosteroni
CNB-2]
gi|299532303|ref|ZP_07045696.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Comamonas testosteroni
S44]
gi|220711132|gb|EED66500.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Comamonas testosteroni
KF-1]
gi|262209857|gb|ACY33955.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Comamonas testosteroni
CNB-2]
gi|298719711|gb|EFI60675.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Comamonas testosteroni
S44]
Length = 220
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 110/203 (54%), Gaps = 11/203 (5%)
Query: 8 HRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV--- 64
H D Y + A++ GYR+RA++KL ++D ++ H V+DL APG W Q +R+
Sbjct: 18 HINDPYVKAAQKDGYRARAAYKLKEIDESLKLIQPGHTVVDLGCAPGAWSQYVRRRLSPS 77
Query: 65 --PVGSL---VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDG 119
VG L ++ LDL+P+ PI G ++ D + A++++ M G D+V+ D
Sbjct: 78 GAAVGELNGRIISLDLLPMEPIEGVHYIQGDFREEAVLAQLEEAM---GGGKADVVVSDM 134
Query: 120 SPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKV 179
+PN+ G A + L+ +V A + P+G V K+F Y+ ++ KQ F+ V
Sbjct: 135 APNLSGHGATDGARVAVLIEMAVDFAINNMKPEGALVVKLFHGSGYNELVDLFKQTFKVV 194
Query: 180 EVDKPAASRSASAEIYLLGIKYK 202
+ KP ASR SAEI+L+G+ K
Sbjct: 195 KPIKPKASRDRSAEIFLVGMGLK 217
>gi|348027847|ref|YP_004870533.1| cell division protein FtsJ [Glaciecola nitratireducens FR1064]
gi|347945190|gb|AEP28540.1| cell division protein FtsJ [Glaciecola nitratireducens FR1064]
Length = 206
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 107/197 (54%), Gaps = 3/197 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y + A+ GYRSRAS+KL++++ K +R V+DL +APGGW QV V
Sbjct: 13 EHVNDPYVKKAQIDGYRSRASYKLIEINEKDKLIRPGSVVMDLGSAPGGWSQVVSPWVGD 72
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ D++P+ I G ++ D T+ A K+++ E D+V+ D +PN+ G
Sbjct: 73 SGRVIASDILPMDGIVGVTFIQGDFTE---EAVYKQILSELNGEKVDVVVSDMAPNLSGV 129
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ S LV ++ +A L P G+F KVF+ Y ++ F+KV V KPAA
Sbjct: 130 NTTDQYSSIYLVELALDMARNVLKPGGSFCAKVFQGVGYEEYAKDVRSSFDKVLVRKPAA 189
Query: 187 SRSASAEIYLLGIKYKA 203
SR S E+Y++G +K
Sbjct: 190 SRPRSREVYIVGKGFKG 206
>gi|448589333|ref|ZP_21649492.1| 23S rRNA methyltransferase J [Haloferax elongans ATCC BAA-1513]
gi|445735761|gb|ELZ87309.1| 23S rRNA methyltransferase J [Haloferax elongans ATCC BAA-1513]
Length = 257
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 113/201 (56%), Gaps = 6/201 (2%)
Query: 9 RLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGS 68
R D YY AK+ GYR+R+++KL QLDS+ + V+DL AAPGGW+QVA ++V
Sbjct: 3 RKDHYYNKAKQEGYRARSAYKLKQLDSETGLFGPGNTVVDLGAAPGGWLQVASEKVGDHG 62
Query: 69 LVLGLDLVPIAPI--RGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+G+DL I I ++ D+T+ + + ++K ++ E G D V+ D +PN+ G
Sbjct: 63 KVVGVDLQRIRDIDHHNVETVRGDMTEDDTKEKLKDIVGEQGA---DAVVSDMAPNMTGE 119
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
++ + L + ++A + LA G F KVF QD + ++ F+ V +P A
Sbjct: 120 YSLDHARSIYLARQAFEVAQELLATGGDFAVKVFDGQDLADFRADMEPEFQYVRSIRPDA 179
Query: 187 SRSASAEIYLLGIKY-KAPAK 206
SR +S+E YL+G + AP +
Sbjct: 180 SRDSSSEQYLVGKHFLTAPVR 200
>gi|59800827|ref|YP_207539.1| hypothetical protein NGO0383 [Neisseria gonorrhoeae FA 1090]
gi|240013700|ref|ZP_04720613.1| hypothetical protein NgonD_03460 [Neisseria gonorrhoeae DGI18]
gi|240016140|ref|ZP_04722680.1| hypothetical protein NgonFA_03058 [Neisseria gonorrhoeae FA6140]
gi|240120769|ref|ZP_04733731.1| hypothetical protein NgonPI_03133 [Neisseria gonorrhoeae PID24-1]
gi|268603220|ref|ZP_06137387.1| cell division protein [Neisseria gonorrhoeae PID1]
gi|293399468|ref|ZP_06643621.1| ribosomal RNA large subunit methyltransferase J [Neisseria
gonorrhoeae F62]
gi|75356299|sp|Q5F9L0.1|RLME_NEIG1 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|59717722|gb|AAW89127.1| putative methyltranferase involved in cell division [Neisseria
gonorrhoeae FA 1090]
gi|268587351|gb|EEZ52027.1| cell division protein [Neisseria gonorrhoeae PID1]
gi|291610037|gb|EFF39159.1| ribosomal RNA large subunit methyltransferase J [Neisseria
gonorrhoeae F62]
Length = 206
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 108/192 (56%), Gaps = 3/192 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D+Y +A++ GYR+RA++KL++++ K ++ + DL +APG W QVA +
Sbjct: 14 EHINDQYVHMAQKDGYRARAAYKLLEINEKDKIIKPGTVLADLGSAPGSWSQVAAKLTGT 73
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V LD++P+ I G ++ D + + A+ + +++ R DLV+ D +PN+ G
Sbjct: 74 SGAVFALDILPMEAIGGVSFIQGDFRENDVLAQFETLLDN---RPLDLVICDMAPNMSGN 130
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ L ++ A+Q L G+F+ KVF+ Y + ++++F V+ KP A
Sbjct: 131 AVSDQARSFYLCELALDFASQHLKTGGSFLVKVFQGAGYQEYMAAMREIFGTVQTRKPEA 190
Query: 187 SRSASAEIYLLG 198
SR+ S+EIYLLG
Sbjct: 191 SRNRSSEIYLLG 202
>gi|381395089|ref|ZP_09920795.1| ribosomal RNA large subunit methyltransferase E [Glaciecola punicea
DSM 14233 = ACAM 611]
gi|379329188|dbj|GAB55928.1| ribosomal RNA large subunit methyltransferase E [Glaciecola punicea
DSM 14233 = ACAM 611]
Length = 206
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 108/196 (55%), Gaps = 3/196 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y + AK GYRSRAS+KL++L+ K R + V+DL +APGGW Q+ V
Sbjct: 13 EHVNDPYVKKAKADGYRSRASYKLIELNEKDKLFRPGNIVMDLGSAPGGWSQIVAPLVGE 72
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ D++ + I G ++ D T A++ + +G +A D+V+ D SPN+ G
Sbjct: 73 RGGVIASDILHMDSIIGVTFIQGDFTDEAVYAQILSTL--NGQKA-DVVMSDMSPNLSGV 129
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ S LV ++ +A L P G+F KVF+ Y + ++ F+KV V KPAA
Sbjct: 130 ATTDQYSSIYLVELALDMARNVLTPGGSFCAKVFQGVGYEEYVKDVRTSFDKVVVRKPAA 189
Query: 187 SRSASAEIYLLGIKYK 202
SR S E+Y++G +K
Sbjct: 190 SRPRSREVYIVGKGFK 205
>gi|39935266|ref|NP_947542.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Rhodopseudomonas
palustris CGA009]
gi|81562937|sp|Q6N7Q9.1|RLME_RHOPA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|39649118|emb|CAE27638.1| cell division protein FtsJ [Rhodopseudomonas palustris CGA009]
Length = 237
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 108/196 (55%), Gaps = 7/196 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVG--- 67
D Y AK GYRSRA++KL ++D KF L+S AV+DL AAPGGW QVA ++V
Sbjct: 33 DPYVAQAKRDGYRSRAAYKLTEIDDKFRLLKSGMAVVDLGAAPGGWSQVAAKKVGAADGR 92
Query: 68 SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAW 127
V+ +DL+ + + G + D P R+++++ D+V+ D + N G
Sbjct: 93 GKVVAIDLLEMGEVPGVTFAQLDFLDPSAPERLREMLGGGA----DIVMSDMAANTTGHR 148
Query: 128 AQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAAS 187
+ + LV + A++ L P GTF+ KVF+S +S++ LK+ + V+ KPAAS
Sbjct: 149 KTDQLRIVGLVETAAMFASEVLKPGGTFLAKVFQSGADASLMTELKRDYASVKHVKPAAS 208
Query: 188 RSASAEIYLLGIKYKA 203
R S+E YLL ++
Sbjct: 209 RKDSSERYLLATGFRG 224
>gi|268598561|ref|ZP_06132728.1| cell division protein FtsJ [Neisseria gonorrhoeae MS11]
gi|268582692|gb|EEZ47368.1| cell division protein FtsJ [Neisseria gonorrhoeae MS11]
Length = 206
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 107/192 (55%), Gaps = 3/192 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y +A++ GYR+RA++KL++++ K ++ + DL +APG W QVA +
Sbjct: 14 EHINDHYVHMAQKDGYRARATYKLLEINEKDKIIKPGTVLADLGSAPGSWSQVAAKLTGT 73
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V LD++P+ I G ++ D + + A+ + +++ R DLV+ D +PN+ G
Sbjct: 74 SGTVFALDILPMEAIGGVSFIQGDFRENDVLAQFETLLDN---RPLDLVICDMAPNMSGN 130
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ L ++ A+Q L G+F+ KVF+ Y + ++++F V+ KP A
Sbjct: 131 AVSDQARSFYLCELALDFASQHLKTGGSFLVKVFQGAGYQEYMAAMREIFGTVQTRKPEA 190
Query: 187 SRSASAEIYLLG 198
SR+ S+EIYLLG
Sbjct: 191 SRNRSSEIYLLG 202
>gi|192290875|ref|YP_001991480.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Rhodopseudomonas
palustris TIE-1]
gi|226705305|sp|B3QFD2.1|RLME_RHOPT RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|192284624|gb|ACF01005.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Rhodopseudomonas
palustris TIE-1]
Length = 237
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 108/196 (55%), Gaps = 7/196 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVG--- 67
D Y AK GYRSRA++KL ++D KF L+S AV+DL AAPGGW QVA ++V
Sbjct: 33 DPYVAQAKRDGYRSRAAYKLTEIDDKFRLLKSGMAVVDLGAAPGGWSQVAAKKVGAADGR 92
Query: 68 SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAW 127
V+ +DL+ + + G + D P R+++++ D+V+ D + N G
Sbjct: 93 GKVVAIDLLEMGEVPGVTFAQLDFLDPSAPERLREMLGGGA----DIVMSDMAANTTGHR 148
Query: 128 AQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAAS 187
+ + LV + A++ L P GTF+ KVF+S +S++ LK+ + V+ KPAAS
Sbjct: 149 KTDQLRIVGLVETAAMFASEVLKPGGTFLAKVFQSGADASLMTELKRDYASVKHVKPAAS 208
Query: 188 RSASAEIYLLGIKYKA 203
R S+E YLL ++
Sbjct: 209 RKDSSERYLLATGFRG 224
>gi|300123162|emb|CBK24435.2| unnamed protein product [Blastocystis hominis]
Length = 288
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 115/212 (54%), Gaps = 8/212 (3%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG+ K + D YYR AKE GYR+R+++KL+Q++ ++ +DLCAAPG W QV
Sbjct: 1 MGRY-SKDKRDIYYRKAKEVGYRARSAFKLLQINEEYHIFDQVSRAVDLCAAPGSWSQVL 59
Query: 61 VQRVPVGSL----VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116
+ + ++ +DL +API G + ++ DIT + +++ + LV+
Sbjct: 60 SRELYKPEKKDVKIVAVDLQEMAPIEGVIQIQGDITS---KKTADEIINHFEGKKAQLVI 116
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
DG+P+V G + Q+ L++ ++ + Q L GTF+ K+FR +D + + L+ F
Sbjct: 117 CDGAPDVTGLHDMDVYVQSQLLLSALSITAQVLCDGGTFIAKIFRGRDVTLLFAQLRVFF 176
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKAPAKID 208
+V KP +SR++S E +++ + P D
Sbjct: 177 SEVACCKPKSSRNSSMEAFVVCRDFSIPEGFD 208
>gi|260220960|emb|CBA29048.1| Ribosomal RNA large subunit methyltransferase J [Curvibacter
putative symbiont of Hydra magnipapillata]
Length = 205
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 110/204 (53%), Gaps = 11/204 (5%)
Query: 8 HRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQ-----VAVQ 62
H D Y +LA + GYR+RA++KL ++D ++ V+DL PG W Q ++ Q
Sbjct: 4 HINDPYVKLANKEGYRARAAYKLKEIDEALHLVKPGQLVVDLGCTPGAWSQYLRRRMSPQ 63
Query: 63 RVPVGSL---VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDG 119
VG + ++GLDL+P+ PI G ++ D + E A+++ + G + DLV+ D
Sbjct: 64 GAAVGEMNGTIIGLDLLPMEPIEGVTFIQGDFREVETLAKLEAAL---GGQKADLVVSDM 120
Query: 120 SPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKV 179
+PN+ G + +A LV +++ A + P+G V KVF Y+ V+ KQ F V
Sbjct: 121 APNLSGISSADAARVEYLVELAIEFAQNHMKPQGALVAKVFHGGSYNEVVQRFKQAFVTV 180
Query: 180 EVDKPAASRSASAEIYLLGIKYKA 203
+ KP ASR S+E +L+G+ K
Sbjct: 181 KPLKPKASRDRSSETFLIGLGLKG 204
>gi|410623395|ref|ZP_11334209.1| ribosomal RNA large subunit methyltransferase E [Glaciecola
pallidula DSM 14239 = ACAM 615]
gi|410156997|dbj|GAC29583.1| ribosomal RNA large subunit methyltransferase E [Glaciecola
pallidula DSM 14239 = ACAM 615]
Length = 206
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 107/197 (54%), Gaps = 3/197 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y + AK GYRSRAS+K+++++ K +R+ + V+DL +APGGW QV V
Sbjct: 13 EHVNDPYVKKAKIDGYRSRASYKIIEINEKDKIIRAGNIVMDLGSAPGGWSQVVAPLVGA 72
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ D++P+ I G ++ D T+ + + V D+V+ D SPN+ G
Sbjct: 73 SGRVIASDILPMDGIIGVTFIQGDFTEAAVYDNILSTLNGDKV---DVVVSDMSPNLSGV 129
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ S LV ++ +A L P G+F KVF+ Y +++ F+KV V KP A
Sbjct: 130 NTTDQYSSIYLVELALDMARNVLKPGGSFCAKVFQGVGYEEYAKEVRKSFDKVVVRKPDA 189
Query: 187 SRSASAEIYLLGIKYKA 203
SR+ S E+Y++G +K
Sbjct: 190 SRARSREVYIVGKGFKG 206
>gi|296445113|ref|ZP_06887073.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylosinus
trichosporium OB3b]
gi|296257287|gb|EFH04354.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylosinus
trichosporium OB3b]
Length = 235
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 108/200 (54%), Gaps = 7/200 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVG--- 67
D Y AK GYRSRA++KL++LD +F R + DL AAPGGW Q+A ++V G
Sbjct: 39 DPYVAQAKRDGYRSRAAYKLLELDERFHLFRPGQRIADLGAAPGGWSQIAARKVGAGQGK 98
Query: 68 SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAW 127
V+G+DL+ + P++G D + R+K+++ D V+ D + N G
Sbjct: 99 GRVVGIDLLEMEPVQGVEFTVMDFNDADAPERIKEMLGGPA----DGVMSDMAANATGHK 154
Query: 128 AQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAAS 187
+ + AL +V+ A + LAP G FV KV + ++L LK+ F V KPAAS
Sbjct: 155 QTDHLKIVALAELAVEFAREVLAPGGFFVAKVLQGGTEHTLLAELKRDFAVVRHVKPAAS 214
Query: 188 RSASAEIYLLGIKYKAPAKI 207
R+ SAE+Y+L ++ A +
Sbjct: 215 RADSAELYVLATGFRGRAAV 234
>gi|302382743|ref|YP_003818566.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Brevundimonas
subvibrioides ATCC 15264]
gi|302193371|gb|ADL00943.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Brevundimonas
subvibrioides ATCC 15264]
Length = 224
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 108/192 (56%), Gaps = 6/192 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D + A+ G+RSRA++K ++D +F ++ V+DL AAPGGW+QV V R + V
Sbjct: 39 DPWSEKARAEGWRSRAAFKFSEIDDRFHLVKRGSRVIDLGAAPGGWVQVCVNRG--AASV 96
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+G+DL+PI PI G+ ++ D T P ++ ++ DLVL D + N G +
Sbjct: 97 VGVDLLPIEPIPGSTLIQADFTDPGVDQQLIDLLGG----PPDLVLSDMAHNTVGHRQTD 152
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ AL+ + A + L P G FVTK F+ D VL L+ F++V+ KPAASR
Sbjct: 153 HLKIIALIEVASDFAIRTLRPGGHFVTKNFQGGDAGRVLAELRAAFQEVKYVKPAASRKG 212
Query: 191 SAEIYLLGIKYK 202
S+E+YL+ + K
Sbjct: 213 SSEVYLVALNRK 224
>gi|427429963|ref|ZP_18919887.1| Ribosomal RNA large subunit methyltransferase J [Caenispirillum
salinarum AK4]
gi|425879342|gb|EKV28049.1| Ribosomal RNA large subunit methyltransferase J [Caenispirillum
salinarum AK4]
Length = 263
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 104/197 (52%), Gaps = 8/197 (4%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV----PV 66
D Y A+ G RSRA++KL++LD +F FL+ V+DL AAPGGW QVAV RV P
Sbjct: 52 DPYVAEARALGLRSRAAFKLLELDDRFHFLKPGQKVVDLGAAPGGWTQVAVDRVNAMKPG 111
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
G V+GLD++ + GA + +D P+ +K + D+VL D + G
Sbjct: 112 GGTVVGLDILEWETVAGATCITKDFNDPDAPDVLKAALGGPA----DVVLSDMAAPTTGH 167
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ + AL+ + A LAP GTFV KVF+ +L +K L E V KP A
Sbjct: 168 PPTDHLRIMALLELAWDFAEDVLAPGGTFVCKVFQGGTEGELLTRMKSLCETVRHAKPPA 227
Query: 187 SRSASAEIYLLGIKYKA 203
SR S+E+Y++ ++
Sbjct: 228 SRKESSEMYVIASGFRG 244
>gi|421557023|ref|ZP_16002932.1| ribosomal RNA large subunit methyltransferase E [Neisseria
meningitidis 80179]
gi|402335708|gb|EJU70972.1| ribosomal RNA large subunit methyltransferase E [Neisseria
meningitidis 80179]
Length = 206
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 107/192 (55%), Gaps = 3/192 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y +A++ GYR+RA++KL++++ K ++ + DL +APG W QVA +
Sbjct: 14 EHVNDHYVHMAQKDGYRARAAYKLLEINEKDKLIKPGTVLADLGSAPGSWSQVAAKLTGT 73
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V LD++P+ I G ++ D + + A+ + +++ R DLV+ D +PN+ G
Sbjct: 74 SGAVFALDILPMEAIGGVSFIQGDFRENDVLAQFETLLDN---RPLDLVICDMAPNMSGN 130
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ L ++ A+Q L G+F+ KVF+ Y + ++++F V+ KP A
Sbjct: 131 AVSDQARSFYLCELALDFASQHLKTGGSFLVKVFQGAGYQEYMAAMREIFGTVQTRKPEA 190
Query: 187 SRSASAEIYLLG 198
SR+ S+EIYLLG
Sbjct: 191 SRNRSSEIYLLG 202
>gi|229520927|ref|ZP_04410349.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae TM 11079-80]
gi|229342160|gb|EEO07156.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae TM 11079-80]
Length = 239
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 111/197 (56%), Gaps = 3/197 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H DKY AK+ GYRSRA +K+ ++ +K L++ V+DL AAPGGW Q A + V
Sbjct: 46 EHFDDKYVNEAKKKGYRSRAIFKIEEIQNKDKLLKAGMTVVDLGAAPGGWSQFAAKVVGE 105
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
G V+ DL+P+ I G L+ D + A + +++ D+V+ D +PN+ G
Sbjct: 106 GGRVIACDLLPMESIAGVSFLQGDFRE---EAVLNALLDRIQPDMVDVVMSDMAPNMAGN 162
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ + LV ++ + Q LAP G+FV KVF+ + + + ++ LF+ V++ KP +
Sbjct: 163 LSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDDYVKAVRDLFKVVKIRKPDS 222
Query: 187 SRSASAEIYLLGIKYKA 203
SRS S E++++ YK
Sbjct: 223 SRSRSREVFIVATGYKG 239
>gi|194098119|ref|YP_002001167.1| putative cell division protein [Neisseria gonorrhoeae NCCP11945]
gi|254493296|ref|ZP_05106467.1| cell division protein FtsJ [Neisseria gonorrhoeae 1291]
gi|268594434|ref|ZP_06128601.1| ribosomal RNA large subunit methyltransferase J [Neisseria
gonorrhoeae 35/02]
gi|268596430|ref|ZP_06130597.1| ribosomal RNA large subunit methyltransferase J [Neisseria
gonorrhoeae FA19]
gi|268600914|ref|ZP_06135081.1| cell division protein [Neisseria gonorrhoeae PID18]
gi|268681701|ref|ZP_06148563.1| cell division protein FtsJ [Neisseria gonorrhoeae PID332]
gi|268683928|ref|ZP_06150790.1| cell division protein [Neisseria gonorrhoeae SK-92-679]
gi|268686171|ref|ZP_06153033.1| cell division protein [Neisseria gonorrhoeae SK-93-1035]
gi|291044276|ref|ZP_06569985.1| ribosomal RNA large subunit methyltransferase J [Neisseria
gonorrhoeae DGI2]
gi|385335306|ref|YP_005889253.1| putative cell division protein [Neisseria gonorrhoeae TCDC-NG08107]
gi|226703876|sp|B4RK82.1|RLME_NEIG2 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|193933409|gb|ACF29233.1| putative cell division protein [Neisseria gonorrhoeae NCCP11945]
gi|226512336|gb|EEH61681.1| cell division protein FtsJ [Neisseria gonorrhoeae 1291]
gi|268547823|gb|EEZ43241.1| ribosomal RNA large subunit methyltransferase J [Neisseria
gonorrhoeae 35/02]
gi|268550218|gb|EEZ45237.1| ribosomal RNA large subunit methyltransferase J [Neisseria
gonorrhoeae FA19]
gi|268585045|gb|EEZ49721.1| cell division protein [Neisseria gonorrhoeae PID18]
gi|268621985|gb|EEZ54385.1| cell division protein FtsJ [Neisseria gonorrhoeae PID332]
gi|268624212|gb|EEZ56612.1| cell division protein [Neisseria gonorrhoeae SK-92-679]
gi|268626455|gb|EEZ58855.1| cell division protein [Neisseria gonorrhoeae SK-93-1035]
gi|291011170|gb|EFE03166.1| ribosomal RNA large subunit methyltransferase J [Neisseria
gonorrhoeae DGI2]
gi|317163849|gb|ADV07390.1| putative cell division protein [Neisseria gonorrhoeae TCDC-NG08107]
Length = 206
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 107/192 (55%), Gaps = 3/192 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y +A++ GYR+RA++KL++++ K ++ + DL +APG W QVA +
Sbjct: 14 EHINDHYVHMAQKDGYRARAAYKLLEINEKDKIIKPGTVLADLGSAPGSWSQVAAKLTGT 73
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V LD++P+ I G ++ D + + A+ + +++ R DLV+ D +PN+ G
Sbjct: 74 SGTVFALDILPMEAIGGVSFIQGDFRENDVLAQFETLLDN---RPLDLVICDMAPNMSGN 130
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ L ++ A+Q L G+F+ KVF+ Y + ++++F V+ KP A
Sbjct: 131 AVSDQARSFYLCELALDFASQHLKTGGSFLVKVFQGAGYQEYMAAMREIFGTVQTRKPEA 190
Query: 187 SRSASAEIYLLG 198
SR+ S+EIYLLG
Sbjct: 191 SRNRSSEIYLLG 202
>gi|16125862|ref|NP_420426.1| cell division protein FtsJ [Caulobacter crescentus CB15]
gi|81535426|sp|Q9A7V4.1|RLME_CAUCR RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|13423014|gb|AAK23594.1| cell division protein FtsJ [Caulobacter crescentus CB15]
Length = 226
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 109/197 (55%), Gaps = 14/197 (7%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D + A+ GYRSRA++K+ ++D KF F V+DL APGGW+Q+AV+R G
Sbjct: 39 DPFSAKARALGYRSRAAFKISEIDDKFHFFSKGAKVIDLGCAPGGWLQIAVER---GVTT 95
Query: 71 L-GLDLVPIAPIRGAVSLEQDIT---KPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
L G+DL+P+ P+ A LE D T PE K++E G DLV+ D +PN G
Sbjct: 96 LAGIDLLPVDPVAPAHLLEMDFTADGAPE------KLLELLGGEP-DLVMSDMAPNTVGH 148
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ + L+ + + A L P G FV K F+ + + ++ LK+ F+KV+ KP A
Sbjct: 149 RETDHLRIVGLIEIAAEFAIDVLKPGGAFVAKAFQGGETAEIIGKLKRHFDKVQHFKPKA 208
Query: 187 SRSASAEIYLLGIKYKA 203
SR S+E++L+ +K
Sbjct: 209 SRQDSSEVFLVATGFKG 225
>gi|335044221|ref|ZP_08537246.1| 23S rRNA methylase [Methylophaga aminisulfidivorans MP]
gi|333787467|gb|EGL53351.1| 23S rRNA methylase [Methylophaga aminisulfidivorans MP]
Length = 205
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 110/192 (57%), Gaps = 3/192 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D+Y + A++ G+RSRA++KL ++D K +R +V+DL +APGGW A+ +V
Sbjct: 13 EHFDDQYVKQAQKEGHRSRATFKLKEIDDKDKLIRPGMSVVDLGSAPGGWSDYALAKVGD 72
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ LD++ + P+ G ++ D + + + KV++ R DLVL D +PN+ G
Sbjct: 73 SGKVIALDILEMTPLTGVHFIQGDFREDDVLDELNKVLDG---RQIDLVLSDMAPNMTGV 129
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ + S LV ++ A L+ G F+ KVF+ + + + L ++ F KV KP A
Sbjct: 130 GSIDQPSSMYLVELALDFALNNLSKSGCFLVKVFQGEGFEAFLKEMRDNFTKVVTRKPGA 189
Query: 187 SRSASAEIYLLG 198
SR+ S E+YLLG
Sbjct: 190 SRARSREVYLLG 201
>gi|403530064|ref|YP_006664593.1| cell division protein ftsJ [Bartonella quintana RM-11]
gi|403232136|gb|AFR25879.1| cell division protein ftsJ [Bartonella quintana RM-11]
Length = 241
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 115/206 (55%), Gaps = 11/206 (5%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y +K GYRSRA++KL++++ ++ FL+ ++DL AAPGGW QVA QR+ V
Sbjct: 41 RHLNDPYVHQSKIDGYRSRAAYKLIEMNERYKFLKKGQKIIDLGAAPGGWCQVA-QRI-V 98
Query: 67 GS-----LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
GS V+G+D +P+ P+ G + LE D + +K+++ G + D+VL D +
Sbjct: 99 GSSDEKPSVVGIDYLPVVPLPGVIMLEMDFLHTDAP---QKLIDALGTKP-DVVLSDMAA 154
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
G + + L + A L G F+ K F+ +++L LKQ F+ V
Sbjct: 155 PTIGHRQTDYLRTIYLCEVAADFALSVLKSGGHFLVKAFQGGAENTLLTTLKQNFKTVHH 214
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKI 207
KP ASR+ S E+YLL +++KA ++
Sbjct: 215 VKPPASRTESVELYLLALEFKAKTEV 240
>gi|421554562|ref|ZP_16000503.1| ribosomal RNA large subunit methyltransferase E [Neisseria
meningitidis 98008]
gi|402332522|gb|EJU67847.1| ribosomal RNA large subunit methyltransferase E [Neisseria
meningitidis 98008]
Length = 206
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 107/192 (55%), Gaps = 3/192 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y +A++ GYR+RA++KL++++ K ++ + DL +APG W QVA +
Sbjct: 14 EHVNDHYVHMAQKDGYRARAAYKLLEINDKDKLIKPGTVLADLGSAPGSWSQVAAKLTGT 73
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V LD++P+ I G ++ D + + A+ + +++ R DLV+ D +PN+ G
Sbjct: 74 SGAVFALDILPMEAIGGVSFIQGDFRENDVLAQFETLLDN---RPLDLVICDMAPNMSGN 130
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ L ++ A+Q L G+F+ KVF+ Y + ++++F V+ KP A
Sbjct: 131 AVSDQARSFYLCELALDFASQHLKTGGSFLVKVFQGAGYQDYMAAMREIFGTVQTRKPEA 190
Query: 187 SRSASAEIYLLG 198
SR+ S+EIYLLG
Sbjct: 191 SRNRSSEIYLLG 202
>gi|421539978|ref|ZP_15986131.1| ribosomal RNA large subunit methyltransferase E [Neisseria
meningitidis 93004]
gi|421560976|ref|ZP_16006829.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
NM2657]
gi|402320262|gb|EJU55753.1| ribosomal RNA large subunit methyltransferase E [Neisseria
meningitidis 93004]
gi|402339456|gb|EJU74672.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
NM2657]
Length = 206
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 108/192 (56%), Gaps = 3/192 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y +A++ GYR+RA++KL++++ K ++ + DL +APG W QVA +
Sbjct: 14 EHVNDHYVHMAQKDGYRARAAYKLLEINDKDKLIKPGTVLADLGSAPGSWSQVAAKLTGS 73
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V LD++P+ I G ++ D + + A+ + +++ R DLV+ D +PN+ G
Sbjct: 74 SGAVFALDILPMEAIGGVSFIQGDFRENDVLAQFETLLDN---RPLDLVICDMAPNMSGN 130
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ + L ++ A+Q L G+F+ KVF+ Y + ++++F V+ KP A
Sbjct: 131 AVSDQVRSFYLCELALDFASQHLKTGGSFLVKVFQGAGYQEYMAAMREIFGTVQTRKPEA 190
Query: 187 SRSASAEIYLLG 198
SR+ S+EIYLLG
Sbjct: 191 SRNRSSEIYLLG 202
>gi|56416831|ref|YP_153905.1| cell division protein [Anaplasma marginale str. St. Maries]
gi|222475196|ref|YP_002563612.1| cell division protein FtsJ [Anaplasma marginale str. Florida]
gi|254995031|ref|ZP_05277221.1| cell division protein (ftsJ) [Anaplasma marginale str. Mississippi]
gi|255003177|ref|ZP_05278141.1| cell division protein (ftsJ) [Anaplasma marginale str. Puerto Rico]
gi|255004308|ref|ZP_05279109.1| cell division protein (ftsJ) [Anaplasma marginale str. Virginia]
gi|269958781|ref|YP_003328569.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Anaplasma centrale str.
Israel]
gi|81359063|sp|Q5PAN0.1|RLME_ANAMM RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|254809546|sp|B9KIP4.1|RLME_ANAMF RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|56388063|gb|AAV86650.1| cell division protein [Anaplasma marginale str. St. Maries]
gi|222419333|gb|ACM49356.1| cell division protein (ftsJ) [Anaplasma marginale str. Florida]
gi|269848611|gb|ACZ49255.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Anaplasma centrale str.
Israel]
Length = 201
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 109/192 (56%), Gaps = 9/192 (4%)
Query: 16 LAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVG--SLVLGL 73
LAK+HGYRSR+++KL+ +D KF L+ VLDL + PGGW QVA +RV G + V+ +
Sbjct: 2 LAKKHGYRSRSAYKLIDIDCKFKLLQRGRYVLDLGSCPGGWAQVAAERVAEGGKAHVVAV 61
Query: 74 DLVPIAPIRGAVSLEQDI-TKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAM 132
D+ P+ I ++ D+ PE ++ +++ R FD+VL D +P G +
Sbjct: 62 DMAPMERIPNVDFVQCDVEHSPE---LLRAALQD---RKFDVVLSDMAPKSCGHRQVDHA 115
Query: 133 SQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASA 192
+ L ++ LA +FL G+FVTK+ + + L+ F V KP +SRS S+
Sbjct: 116 NIINLCEMALDLAVEFLRSGGSFVTKILQGEYEQEFRRSLQYYFASVTYFKPKSSRSESS 175
Query: 193 EIYLLGIKYKAP 204
EIYL+G K+K P
Sbjct: 176 EIYLVGTKFKNP 187
>gi|388258636|ref|ZP_10135811.1| LacI family transcription regulator [Cellvibrio sp. BR]
gi|387937395|gb|EIK43951.1| LacI family transcription regulator [Cellvibrio sp. BR]
Length = 206
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 111/197 (56%), Gaps = 3/197 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y + A+ GYR+RA++KL++L+ K +R + V+DL +APG W Q+A + V V
Sbjct: 13 EHVNDPYVKKAQVDGYRARAAYKLLELNEKDKLIRPAMMVVDLGSAPGSWSQIAGRLVGV 72
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ D++P+ + ++ D T+ ++ME+ G D+V+ D +PN+ G
Sbjct: 73 KGRVIASDILPMDSLEHVDFIQGDFTEEVV---FNQIMEKLGGNRADVVISDMAPNISGV 129
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
A + S LV ++ +A L PKG FV KVF + Y + ++ FEKV + KP A
Sbjct: 130 DAVDQASSMYLVELALDMARSVLKPKGDFVAKVFHGEGYDDYVKEVRTSFEKVVIRKPDA 189
Query: 187 SRSASAEIYLLGIKYKA 203
SR S E+Y++G +K
Sbjct: 190 SRPRSREVYVVGKGFKG 206
>gi|15676697|ref|NP_273841.1| cell division protein FtsJ [Neisseria meningitidis MC58]
gi|161869743|ref|YP_001598910.1| cell division protein [Neisseria meningitidis 053442]
gi|218767917|ref|YP_002342429.1| cell division protein [Neisseria meningitidis Z2491]
gi|304387890|ref|ZP_07370064.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis ATCC 13091]
gi|385324447|ref|YP_005878886.1| ribosomal RNA large subunit methyltransferase J (rRNA
(uridine-2'-O-)-methyltransferase; 23S rRNA m2U2552
methyltransferase; cell division protein FtsJ)
[Neisseria meningitidis 8013]
gi|385328133|ref|YP_005882436.1| putative cell division protein [Neisseria meningitidis alpha710]
gi|385337751|ref|YP_005891624.1| ribosomal RNA large subunit methyltransferase J (rRNA
(uridine-2'-O-)-methyltransferase; 23S rRNA m2U2552
methyltransferase; cell division protein FtsJ)
[Neisseria meningitidis WUE 2594]
gi|385339773|ref|YP_005893645.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis G2136]
gi|385342200|ref|YP_005896071.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis M01-240149]
gi|385851537|ref|YP_005898052.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis M04-240196]
gi|385853513|ref|YP_005900027.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis H44/76]
gi|385856953|ref|YP_005903465.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis NZ-05/33]
gi|416162842|ref|ZP_11606851.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis N1568]
gi|416172576|ref|ZP_11608769.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis OX99.30304]
gi|416183699|ref|ZP_11612712.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis M13399]
gi|416188196|ref|ZP_11614665.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis M0579]
gi|416213911|ref|ZP_11622604.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis M01-240013]
gi|421544174|ref|ZP_15990252.1| ribosomal RNA large subunit methyltransferase E [Neisseria
meningitidis NM140]
gi|421546284|ref|ZP_15992333.1| ribosomal RNA large subunit methyltransferase E [Neisseria
meningitidis NM183]
gi|421548553|ref|ZP_15994578.1| ribosomal RNA large subunit methyltransferase E [Neisseria
meningitidis NM2781]
gi|421550353|ref|ZP_15996358.1| ribosomal RNA large subunit methyltransferase E [Neisseria
meningitidis 69166]
gi|421552578|ref|ZP_15998552.1| ribosomal RNA large subunit methyltransferase E [Neisseria
meningitidis NM576]
gi|421563027|ref|ZP_16008849.1| ribosomal RNA large subunit methyltransferase E [Neisseria
meningitidis NM2795]
gi|421565089|ref|ZP_16010875.1| ribosomal RNA large subunit methyltransferase E [Neisseria
meningitidis NM3081]
gi|421906595|ref|ZP_16336488.1| cell division protein FtsJ [Neisseria meningitidis alpha704]
gi|427828521|ref|ZP_18995537.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
H44/76]
gi|433464782|ref|ZP_20422267.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
NM422]
gi|433466949|ref|ZP_20424406.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
87255]
gi|433468956|ref|ZP_20426385.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
98080]
gi|433471197|ref|ZP_20428588.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
68094]
gi|433473203|ref|ZP_20430567.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
97021]
gi|433475409|ref|ZP_20432750.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
88050]
gi|433477288|ref|ZP_20434611.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
70012]
gi|433479507|ref|ZP_20436801.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
63041]
gi|433481752|ref|ZP_20439017.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
2006087]
gi|433483738|ref|ZP_20440966.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
2002038]
gi|433485937|ref|ZP_20443138.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
97014]
gi|433488033|ref|ZP_20445201.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
M13255]
gi|433490151|ref|ZP_20447280.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
NM418]
gi|433504558|ref|ZP_20461498.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
9506]
gi|433506821|ref|ZP_20463733.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
9757]
gi|433509002|ref|ZP_20465875.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
12888]
gi|433511066|ref|ZP_20467898.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
4119]
gi|433513158|ref|ZP_20469952.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
63049]
gi|433515471|ref|ZP_20472243.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
2004090]
gi|433517305|ref|ZP_20474054.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
96023]
gi|433519525|ref|ZP_20476246.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
65014]
gi|433521627|ref|ZP_20478322.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
61103]
gi|433523594|ref|ZP_20480259.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
97020]
gi|433525670|ref|ZP_20482304.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
69096]
gi|433527914|ref|ZP_20484525.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
NM3652]
gi|433530088|ref|ZP_20486681.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
NM3642]
gi|433532346|ref|ZP_20488912.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
2007056]
gi|433534230|ref|ZP_20490775.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
2001212]
gi|433538680|ref|ZP_20495160.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
70030]
gi|433540658|ref|ZP_20497113.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
63006]
gi|81542244|sp|Q9JQX5.1|RLME_NEIMA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|81707224|sp|Q7DDL2.1|RLME_NEIMB RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|189040316|sp|A9M3N1.1|RLME_NEIM0 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|7226032|gb|AAF41212.1| cell division protein FtsJ [Neisseria meningitidis MC58]
gi|121051925|emb|CAM08231.1| putative cell division protein [Neisseria meningitidis Z2491]
gi|161595296|gb|ABX72956.1| cell division protein [Neisseria meningitidis 053442]
gi|261392834|emb|CAX50415.1| ribosomal RNA large subunit methyltransferase J (rRNA
(uridine-2'-O-)-methyltransferase; 23S rRNA m2U2552
methyltransferase; cell division protein FtsJ)
[Neisseria meningitidis 8013]
gi|304338155|gb|EFM04291.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis ATCC 13091]
gi|308388985|gb|ADO31305.1| putative cell division protein [Neisseria meningitidis alpha710]
gi|316983790|gb|EFV62771.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
H44/76]
gi|319410165|emb|CBY90501.1| ribosomal RNA large subunit methyltransferase J (rRNA
(uridine-2'-O-)-methyltransferase; 23S rRNA m2U2552
methyltransferase; cell division protein FtsJ)
[Neisseria meningitidis WUE 2594]
gi|325127924|gb|EGC50827.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis N1568]
gi|325129969|gb|EGC52768.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis OX99.30304]
gi|325134056|gb|EGC56711.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis M13399]
gi|325135979|gb|EGC58589.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis M0579]
gi|325144164|gb|EGC66471.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis M01-240013]
gi|325198017|gb|ADY93473.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis G2136]
gi|325200517|gb|ADY95972.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis H44/76]
gi|325202406|gb|ADY97860.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis M01-240149]
gi|325206360|gb|ADZ01813.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis M04-240196]
gi|325207842|gb|ADZ03294.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis NZ-05/33]
gi|393292343|emb|CCI72429.1| cell division protein FtsJ [Neisseria meningitidis alpha704]
gi|402324019|gb|EJU59457.1| ribosomal RNA large subunit methyltransferase E [Neisseria
meningitidis NM183]
gi|402324286|gb|EJU59722.1| ribosomal RNA large subunit methyltransferase E [Neisseria
meningitidis NM140]
gi|402326214|gb|EJU61619.1| ribosomal RNA large subunit methyltransferase E [Neisseria
meningitidis NM2781]
gi|402330568|gb|EJU65915.1| ribosomal RNA large subunit methyltransferase E [Neisseria
meningitidis 69166]
gi|402331210|gb|EJU66551.1| ribosomal RNA large subunit methyltransferase E [Neisseria
meningitidis NM576]
gi|402341734|gb|EJU76907.1| ribosomal RNA large subunit methyltransferase E [Neisseria
meningitidis NM2795]
gi|402345418|gb|EJU80535.1| ribosomal RNA large subunit methyltransferase E [Neisseria
meningitidis NM3081]
gi|432203525|gb|ELK59576.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
87255]
gi|432204269|gb|ELK60314.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
NM422]
gi|432205349|gb|ELK61379.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
98080]
gi|432209686|gb|ELK65653.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
68094]
gi|432210804|gb|ELK66760.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
97021]
gi|432211227|gb|ELK67182.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
88050]
gi|432216510|gb|ELK72391.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
70012]
gi|432217310|gb|ELK73179.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
63041]
gi|432217583|gb|ELK73451.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
2006087]
gi|432221441|gb|ELK77251.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
2002038]
gi|432222983|gb|ELK78765.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
97014]
gi|432224499|gb|ELK80264.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
M13255]
gi|432228059|gb|ELK83760.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
NM418]
gi|432242073|gb|ELK97597.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
9506]
gi|432242610|gb|ELK98128.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
9757]
gi|432247816|gb|ELL03251.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
12888]
gi|432248557|gb|ELL03982.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
4119]
gi|432248835|gb|ELL04259.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
63049]
gi|432254059|gb|ELL09395.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
2004090]
gi|432254314|gb|ELL09649.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
96023]
gi|432255516|gb|ELL10845.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
65014]
gi|432260400|gb|ELL15659.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
61103]
gi|432260493|gb|ELL15751.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
97020]
gi|432261861|gb|ELL17106.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
69096]
gi|432266221|gb|ELL21409.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
NM3652]
gi|432268016|gb|ELL23188.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
NM3642]
gi|432268291|gb|ELL23462.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
2007056]
gi|432272740|gb|ELL27847.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
2001212]
gi|432274688|gb|ELL29775.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
70030]
gi|432277673|gb|ELL32719.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
63006]
Length = 206
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 107/192 (55%), Gaps = 3/192 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y +A++ GYR+RA++KL++++ K ++ + DL +APG W QVA +
Sbjct: 14 EHVNDHYVHMAQKDGYRARAAYKLLEINEKDKLIKPGTVLADLGSAPGSWSQVAAKLTGT 73
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V LD++P+ I G ++ D + + A+ + +++ R DLV+ D +PN+ G
Sbjct: 74 SGAVFALDILPMEAIGGVSFIQGDFRENDVLAQFETLLDN---RPLDLVICDMAPNMSGN 130
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ L ++ A+Q L G+F+ KVF+ Y + ++++F V+ KP A
Sbjct: 131 AVSDQARSFYLCELALDFASQHLKTGGSFLVKVFQGAGYQEYMAAMREIFGTVQTRKPEA 190
Query: 187 SRSASAEIYLLG 198
SR+ S+EIYLLG
Sbjct: 191 SRNRSSEIYLLG 202
>gi|29654650|ref|NP_820342.1| 23S rRNA Um2552 2'-O-methyltransferase [Coxiella burnetii RSA 493]
gi|154707305|ref|YP_001424788.1| 23S rRNA Um2552 2'-O-methyltransferase [Coxiella burnetii Dugway
5J108-111]
gi|212212272|ref|YP_002303208.1| 23S rRNA Um2552 2'-O-methyltransferase [Coxiella burnetii
CbuG_Q212]
gi|81628790|sp|Q83BY4.1|RLME_COXBU RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|189040686|sp|A9KGE6.1|RLME_COXBN RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226703292|sp|B6IZD5.1|RLME_COXB2 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|29541918|gb|AAO90856.1| 23S rRNA Um2552 2'-O-methyltransferase [Coxiella burnetii RSA 493]
gi|154356591|gb|ABS78053.1| 23S rRNA Um2552 2'-O-methyltransferase [Coxiella burnetii Dugway
5J108-111]
gi|212010682|gb|ACJ18063.1| 23S rRNA Um2552 2'-O-methyltransferase [Coxiella burnetii
CbuG_Q212]
Length = 212
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 108/191 (56%), Gaps = 1/191 (0%)
Query: 8 HRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVG 67
H D Y + AK+ GY SRA++KL+++ K+ + S V+DL AAPGGW QVA V
Sbjct: 11 HEKDPYVKRAKKEGYPSRAAYKLLEIHQKYKLFKPSMNVIDLGAAPGGWSQVAKDLVGPK 70
Query: 68 SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRA-FDLVLHDGSPNVGGA 126
+V+ +DL+P+ + + ++ D +PE +++ ++ + + DLV+ D +PN+ G
Sbjct: 71 GVVIAIDLLPMQSMLDVIFIQGDFNEPEIFNQLEAIVAKKTLTGQVDLVISDMAPNISGI 130
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ LV + A + LA GTF+ KVF+ L L+ F +V+ KP+A
Sbjct: 131 KNVDQSRSLHLVELAWDCAQKLLARGGTFLVKVFQGPGVDRFLINLRPYFNQVKFLKPSA 190
Query: 187 SRSASAEIYLL 197
SRS S+EIY+L
Sbjct: 191 SRSRSSEIYIL 201
>gi|383759178|ref|YP_005438163.1| ribosomal RNA large subunit methyltransferase J [Rubrivivax
gelatinosus IL144]
gi|381379847|dbj|BAL96664.1| ribosomal RNA large subunit methyltransferase J [Rubrivivax
gelatinosus IL144]
Length = 226
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 104/204 (50%), Gaps = 11/204 (5%)
Query: 8 HRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQ-----VAVQ 62
H D Y + A+ GYRSRA++KL ++D F+ +R +DL A PG W Q A +
Sbjct: 17 HLTDPYVKAAQREGYRSRAAYKLKEIDEAFALIRPGQVAVDLGATPGAWSQYLRRRFAPE 76
Query: 63 RVPVGSL---VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDG 119
G+L ++ LD++ PI G L+ D + E AR+ E R D+V+ D
Sbjct: 77 GAAAGALDGTIIALDILDFEPIEGVTFLQGDFREDEVAARLAA---ELAGRPVDIVVSDM 133
Query: 120 SPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKV 179
+PN+ G +A LV +V+ A Q L P+G V K F YS ++ K F V
Sbjct: 134 APNLSGIPVSDAARVAHLVELAVEFALQHLKPEGALVCKAFHGSGYSQLVKLFKDSFRIV 193
Query: 180 EVDKPAASRSASAEIYLLGIKYKA 203
+ KP ASR SAE +L+GI K+
Sbjct: 194 KPIKPKASRDKSAETFLVGIGPKS 217
>gi|307353428|ref|YP_003894479.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanoplanus
petrolearius DSM 11571]
gi|307156661|gb|ADN36041.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanoplanus
petrolearius DSM 11571]
Length = 199
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 113/203 (55%), Gaps = 10/203 (4%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MG GK DKYY ++ GYRSRA++KL+ + +F +R ++DL AAPG WMQV
Sbjct: 1 MGSQWGK---DKYYNKSRSEGYRSRAAYKLLDIQKRFGIIRDDDNIVDLGAAPGSWMQV- 56
Query: 61 VQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120
++ + G++V G+DL PIAPI + + D T + + ++ + E ++V+ D S
Sbjct: 57 LRDMTSGAIV-GVDLNPIAPIENTIQITGDFTTEKIQEKIISHIHE-----VNVVVCDAS 110
Query: 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180
P + G+ + + L ++ + A + L P G FV K F+ + +S +L +++ F V+
Sbjct: 111 PKLSGSKSYDQARAIGLNHEAFEFARRVLKPGGNFVIKSFQGEMFSELLNDIRESFYSVK 170
Query: 181 VDKPAASRSASAEIYLLGIKYKA 203
V + ASR S E Y++ ++
Sbjct: 171 VYRTTASRRGSTETYIIAKNFRG 193
>gi|114046589|ref|YP_737139.1| 23S rRNA methyltransferase J [Shewanella sp. MR-7]
gi|122944866|sp|Q0HXS3.1|RLME_SHESR RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|113888031|gb|ABI42082.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Shewanella sp. MR-7]
Length = 209
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 110/196 (56%), Gaps = 3/196 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y +LA++ G RSRA++KL +L K +R V+DL AAPGGW QVAV+
Sbjct: 16 EHFDDHYVKLAQKRGLRSRAAFKLEELQQKDQLIRPGMTVVDLGAAPGGWSQVAVKLAGD 75
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ D++P+ PI G L+ D + + ++ ++ G D+VL D +PN+ G+
Sbjct: 76 KGKVIACDILPMDPIVGVDFLQGDFREEKV---LEALLTRVGADKVDVVLSDMAPNMSGS 132
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ LV ++ + Q LAP G+F KVF+ + + + +K+ F+ V+ KP +
Sbjct: 133 DGVDQPRAMYLVELALDMCHQVLAPNGSFAVKVFQGEGFDEYMKAVKEAFKVVKTRKPDS 192
Query: 187 SRSASAEIYLLGIKYK 202
SR+ S E+YL+ YK
Sbjct: 193 SRARSREVYLVATGYK 208
>gi|313673338|ref|YP_004051449.1| 23S rRNA um-2552 2'-o-methyltransferase [Calditerrivibrio
nitroreducens DSM 19672]
gi|312940094|gb|ADR19286.1| 23S rRNA Um-2552 2'-O-methyltransferase [Calditerrivibrio
nitroreducens DSM 19672]
Length = 196
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 112/197 (56%), Gaps = 7/197 (3%)
Query: 8 HRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVG 67
+R D +Y+ AK GYRSRAS+KL++L+ K+ R + AVLD+ AAPGGW QVA+Q +
Sbjct: 3 NRKDSFYKKAKLEGYRSRASYKLLELNQKYKLFRKNDAVLDVGAAPGGWSQVALQLLGEK 62
Query: 68 SLVLGLDLVPIAPI--RGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG 125
+V+ +D++ I P+ + ++ DI + + K +FD+V+ D +PN G
Sbjct: 63 GIVVAVDILDINPLNDKRFHFIKGDIRDENTLSEITKYAS-----SFDIVISDIAPNTTG 117
Query: 126 AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
+ + L+ + + L G F+ K+F ++ S++ LK+LFE +++ +P
Sbjct: 118 QKFVDHQNSINLIKTVMNFIMKTLKKNGIFLFKLFDGEERESLVKDLKELFEDIKIIRPD 177
Query: 186 ASRSASAEIYLLGIKYK 202
A+R S EIY++ YK
Sbjct: 178 ATRKNSFEIYIICKGYK 194
>gi|121605506|ref|YP_982835.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Polaromonas
naphthalenivorans CJ2]
gi|143460978|sp|A1VQI6.1|RLME_POLNA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|120594475|gb|ABM37914.1| 23S rRNA Um-2552 2'-O-methyltransferase [Polaromonas
naphthalenivorans CJ2]
Length = 245
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 111/200 (55%), Gaps = 9/200 (4%)
Query: 8 HRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV--- 64
H D Y + A++ GYR+RA++KL ++D ++ V+DL + PG W Q +++
Sbjct: 37 HINDPYVKQARKEGYRARAAFKLKEMDETLGLIKPGDCVVDLGSTPGAWSQYVRRKLSPT 96
Query: 65 --PVGSL---VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVME-EHGVRAFDLVLHD 118
VG+L ++GLDL+P+ PI G V ++ D +PE A++++ + E G DLV+ D
Sbjct: 97 GAAVGALNGRIIGLDLLPMEPIEGVVFIQGDFREPEVLAKLEQALSTEKGPVKVDLVISD 156
Query: 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178
+PN+ G + +A LV +V+ A + P G V K+F Y ++ + F+
Sbjct: 157 MAPNLSGIESADAARIAHLVELAVEFAQTRMKPDGALVVKLFHGSGYDDLVKLFQASFKV 216
Query: 179 VEVDKPAASRSASAEIYLLG 198
V+ KP ASR S+E +L+G
Sbjct: 217 VKRMKPKASRPNSSETFLVG 236
>gi|323445643|gb|EGB02153.1| hypothetical protein AURANDRAFT_8728 [Aureococcus anophagefferens]
Length = 203
Score = 115 bits (288), Expect = 1e-22, Method: Composition-based stats.
Identities = 81/203 (39%), Positives = 111/203 (54%), Gaps = 10/203 (4%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHA-----VLDLCAAPGG 55
MG+ R D YYRLAK YR+RA++KL+QLD+ L ++ V DLCAAPGG
Sbjct: 1 MGRTSRDKR-DIYYRLAKTSNYRARAAFKLLQLDATLGILSTATTHDRLRVADLCAAPGG 59
Query: 56 WMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV 115
W QV +R P G+ V+ +DL PIAPI G + DIT V + +V
Sbjct: 60 WSQVVAERRP-GARVVAVDLKPIAPIAGVEMVLGDITAAATAREVVDALGGGADARRGVV 118
Query: 116 LHDGSPNVGGAWAQEAMSQNALV-IDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQ 174
L DG+P+V G + QN L S + FL G FV+KV+R +D +++L L++
Sbjct: 119 LCDGAPDVIGLNDVDEHLQNELARAASGRREPPFLG--GCFVSKVYRGRDATALLESLRK 176
Query: 175 LFEKVEVDKPAASRSASAEIYLL 197
F V V KP SRSAS E +++
Sbjct: 177 HFRSVFVAKPRCSRSASPEAFVV 199
>gi|229505742|ref|ZP_04395252.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae BX 330286]
gi|229509225|ref|ZP_04398710.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae B33]
gi|229512898|ref|ZP_04402365.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae TMA 21]
gi|229519566|ref|ZP_04409009.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae RC9]
gi|229525289|ref|ZP_04414694.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae bv. albensis VL426]
gi|229530441|ref|ZP_04419829.1| cell division protein ftsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae 12129(1)]
gi|229608853|ref|YP_002879501.1| 23S rRNA methyltransferase J [Vibrio cholerae MJ-1236]
gi|229332214|gb|EEN97702.1| cell division protein ftsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae 12129(1)]
gi|229338870|gb|EEO03887.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae bv. albensis VL426]
gi|229344255|gb|EEO09230.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae RC9]
gi|229350147|gb|EEO15100.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae TMA 21]
gi|229353797|gb|EEO18733.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae B33]
gi|229357965|gb|EEO22882.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae BX 330286]
gi|229371508|gb|ACQ61931.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae MJ-1236]
Length = 239
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 111/197 (56%), Gaps = 3/197 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H DKY AK+ GYRSRA +K+ ++ +K L++ V+DL AAPGGW Q A + V
Sbjct: 46 EHFDDKYVNEAKKKGYRSRAIFKIEEIQNKDKLLKAGMTVVDLGAAPGGWSQFAAKVVGE 105
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
G V+ DL+P+ I G L+ D + A + +++ D+V+ D +PN+ G
Sbjct: 106 GGRVIACDLLPMESIAGVSFLQGDFRE---EAVLNALLDRIQPDMVDVVMSDMAPNMAGN 162
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ + LV ++ + Q LAP G+FV KVF+ + + + ++ LF+ V++ KP +
Sbjct: 163 LSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDDYVKAVRDLFKVVKIRKPDS 222
Query: 187 SRSASAEIYLLGIKYKA 203
SRS S E++++ YK
Sbjct: 223 SRSRSREVFIVATGYKG 239
>gi|344239698|gb|EGV95801.1| Putative ribosomal RNA methyltransferase 2 [Cricetulus griseus]
Length = 245
Score = 115 bits (287), Expect = 1e-22, Method: Composition-based stats.
Identities = 75/207 (36%), Positives = 107/207 (51%), Gaps = 14/207 (6%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV-- 64
+H D + + AK YR R+++KL+ ++ K LR VLD AAPG W QVAVQRV
Sbjct: 37 RHLKDPFVKAAKVESYRCRSAFKLMAINEKHHILRPGLRVLDCGAAPGAWSQVAVQRVNA 96
Query: 65 -------PVGSLVLGLDLVPIAPIRGAVSL-EQDITKPECRARVKKVMEEHGVRAFDLVL 116
PVG VLG+DL+ I P+ GA L D+T P R R+ ++ R D++L
Sbjct: 97 TGTDCSSPVG-YVLGVDLLHIFPLEGATFLCPADVTDPGTRQRILDLLPR---RKADVIL 152
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
D +PN G + +L + V +A L P GT + K + + + L Q F
Sbjct: 153 SDMAPNATGIRDLDHDRLISLCLTLVDMAVDILHPGGTLLCKTWAGRKSHLLQKRLTQEF 212
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKA 203
+ V KP ASR S+E+YLL +Y+
Sbjct: 213 QNTRVVKPEASRKESSEVYLLATQYRG 239
>gi|313668721|ref|YP_004049005.1| cell division protein [Neisseria lactamica 020-06]
gi|421863048|ref|ZP_16294749.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309379377|emb|CBX21944.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|313006183|emb|CBN87645.1| putative cell division protein [Neisseria lactamica 020-06]
Length = 206
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 106/192 (55%), Gaps = 3/192 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y +A++ GYR+RA++KL++++ K ++ + DL +APG W QVA +
Sbjct: 14 EHVNDHYVHMAQKDGYRARAAYKLLEINEKDKLIKPGTVLADLGSAPGSWSQVAAKLTGT 73
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V LD++P+ + G ++ D + + A+ + ++ R DLV+ D +PN+ G
Sbjct: 74 SGAVFALDILPMEAVNGVSFIQGDFRENDVLAQFEGLLNN---RPLDLVICDMAPNMSGN 130
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ L ++ A+Q L G+F+ KVF+ Y + ++++F V+ KP A
Sbjct: 131 AVSDQARSFYLCELALDFASQHLKTGGSFLVKVFQGAGYQEYMAAMREIFGTVQTRKPEA 190
Query: 187 SRSASAEIYLLG 198
SR+ S+EIYLLG
Sbjct: 191 SRNRSSEIYLLG 202
>gi|116748440|ref|YP_845127.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Syntrophobacter
fumaroxidans MPOB]
gi|143461985|sp|A0LGZ0.1|RLME_SYNFM RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|116697504|gb|ABK16692.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Syntrophobacter
fumaroxidans MPOB]
Length = 197
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 112/195 (57%), Gaps = 9/195 (4%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y+ AK+ Y +RA +KL ++ ++ L+ + VLDL AAPG WMQ A + V LV
Sbjct: 7 DHYFHKAKKEHYLARAVYKLQEIQDRYKILKPGNRVLDLGAAPGSWMQFAREIVGPSGLV 66
Query: 71 LGLDLVPI---APIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAW 127
+G+DL + P G V L+ D+T PE AR V EHG FD+VL D +P+ G
Sbjct: 67 VGVDLKGVEHRFP-EGVVVLQGDVTDPEL-ARSLSV--EHG--PFDVVLSDMAPSTSGIR 120
Query: 128 AQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAAS 187
++ L ++++A L P G FV K+F+ ++ +L +K+ FE V+V KP AS
Sbjct: 121 VADSARSALLFESALEMARSALRPGGHFVAKLFQGAEFHVLLQAVKRDFEWVKVTKPDAS 180
Query: 188 RSASAEIYLLGIKYK 202
R S EIY++G++ +
Sbjct: 181 RKQSKEIYVIGMRLR 195
>gi|327282720|ref|XP_003226090.1| PREDICTED: putative ribosomal RNA methyltransferase 2-like [Anolis
carolinensis]
Length = 241
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 111/207 (53%), Gaps = 14/207 (6%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV-- 64
+H D Y + A++ YR R+++KL+++D K LR V+D APG W QVAVQRV
Sbjct: 37 RHFSDPYVKKARQRSYRCRSAFKLIEIDDKHGILRPGLHVVDCGTAPGAWAQVAVQRVNA 96
Query: 65 -------PVGSLVLGLDLVPIAPIRGAVSLEQ-DITKPECRARVKKVMEEHGVRAFDLVL 116
PVG VLG DL+ I+P+ GAV L D+T P R +++ + + D+VL
Sbjct: 97 EGSDPDTPVG-FVLGFDLLHISPLEGAVFLPHSDLTDPSTRQKIRDSLPKGKA---DVVL 152
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
D +PN G + L + + LA L P GT + K + S++ + L Q F
Sbjct: 153 SDMAPNATGIRELDHDRLIRLCLSLLDLAPHILHPGGTLLCKFWESKESRLLQKRLTQDF 212
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKA 203
++V+ KP ASR SAE+Y L YK+
Sbjct: 213 KEVKSIKPQASRKESAEMYYLAKLYKS 239
>gi|298290958|ref|YP_003692897.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Starkeya novella DSM
506]
gi|296927469|gb|ADH88278.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Starkeya novella DSM
506]
Length = 236
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 107/196 (54%), Gaps = 7/196 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVG--- 67
D Y AK G+RSRA++KL+++D K L+ V+DL AAPGGW QVA QRV
Sbjct: 40 DPYVARAKREGWRSRAAFKLLEIDDKLKLLKPGLRVVDLGAAPGGWSQVAAQRVKATEGR 99
Query: 68 SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAW 127
V+ +DL+ I PI + D K E R+K+++ D+VL D + N G
Sbjct: 100 GKVVAIDLLEIDPIPAVDFAQLDFLKDEAPDRLKEMLGGEA----DVVLSDMAANTTGHR 155
Query: 128 AQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAAS 187
A + + LV ++ A Q L+P G FV KVF+ +++L LK+ F V KP AS
Sbjct: 156 ATDHLRIVGLVELAIDFARQVLSPGGAFVAKVFQGGTENTLLAELKRDFTTVRHIKPQAS 215
Query: 188 RSASAEIYLLGIKYKA 203
R+ SAE+Y++ ++
Sbjct: 216 RADSAELYVVATGFRG 231
>gi|397688599|ref|YP_006525918.1| cell division protein FtsJ [Pseudomonas stutzeri DSM 10701]
gi|395810155|gb|AFN79560.1| cell division protein FtsJ [Pseudomonas stutzeri DSM 10701]
Length = 206
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 108/196 (55%), Gaps = 3/196 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y + A++ G RSR+S+KLV+L+ K +R V+DL +APGGW QVA V
Sbjct: 13 EHVNDPYVKKAQKDGLRSRSSYKLVELNEKDKLIRPGMLVMDLGSAPGGWSQVAGGLVGE 72
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ D++P+ P+ ++ D T A ++++ R DL++ D +PN+ G
Sbjct: 73 KGRVIATDILPMDPLDNVDFIQGDFTD---DAVFQQILARLDGRQPDLIVSDIAPNISGI 129
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
A + S LV ++ + Q L P G +V KVF+ + L ++ FEKV + KP A
Sbjct: 130 AAADQASSMYLVELTLDMVRQVLKPGGNYVVKVFQGEGSDQFLKDVRTSFEKVVIRKPEA 189
Query: 187 SRSASAEIYLLGIKYK 202
SR S E+YL+G +K
Sbjct: 190 SRPRSREVYLVGKGFK 205
>gi|34499253|ref|NP_903468.1| cell division protein FtsJ [Chromobacterium violaceum ATCC 12472]
gi|81654487|sp|Q7NRI3.1|RLME_CHRVO RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|34105104|gb|AAQ61460.1| cell division protein FtsJ [Chromobacterium violaceum ATCC 12472]
Length = 205
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 108/192 (56%), Gaps = 3/192 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D+Y +A++ GYR+RA++KL++++ K +R + DL + PG W QVA + V
Sbjct: 13 EHVNDQYVHMAQKDGYRARAAYKLLEINDKDKLIRPGTVLADLGSTPGSWSQVAARIVGE 72
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V LD++ + P+ G ++ D + +++++ RA DLV+ D +PN+ G
Sbjct: 73 KGKVFALDILDMDPVPGVDFIQGDFREEAVLREFEQLLDG---RALDLVISDMAPNMSGM 129
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
A + L +++ A L P G F+ KVF+ D+ L +++LF++V KP A
Sbjct: 130 SAIDQARSFLLCELALEFARDHLKPGGHFLVKVFQGSDFQPYLKAMRELFDEVVTRKPKA 189
Query: 187 SRSASAEIYLLG 198
SR S+EIYLLG
Sbjct: 190 SRDRSSEIYLLG 201
>gi|374335269|ref|YP_005091956.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Oceanimonas sp. GK1]
gi|372984956|gb|AEY01206.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Oceanimonas sp. GK1]
Length = 209
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 109/196 (55%), Gaps = 3/196 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H DKY + A++ G RSRA +KL +L + LR V+DL AAPGGW Q A ++V
Sbjct: 16 EHFDDKYVQQAQKKGLRSRAVFKLEELQGRDKLLRPGMTVVDLGAAPGGWSQYATEQVGQ 75
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
G V+ D++P+ PI G L+ D + A + ++E G D++L D +PN+ G
Sbjct: 76 GGKVIACDILPMDPIAGVDFLQGDFRE---EAVLNALLERVGDDKVDVLLSDMAPNMSGT 132
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ LV ++ + Q LAP+G+FV KVF+ + L +++ F V+V KP +
Sbjct: 133 PEVDQPRAMYLVELALDMCRQVLAPRGSFVVKVFQGAGFDEFLGEVRRSFATVKVRKPDS 192
Query: 187 SRSASAEIYLLGIKYK 202
SR S E+Y++ +K
Sbjct: 193 SRPRSREVYIVATGFK 208
>gi|347759014|ref|YP_004866576.1| ftsJ-like methyltransferase family protein [Micavibrio
aeruginosavorus ARL-13]
gi|347591532|gb|AEP10574.1| ftsJ-like methyltransferase family protein [Micavibrio
aeruginosavorus ARL-13]
Length = 210
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 107/193 (55%), Gaps = 7/193 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y A++ G+RSRA++KL+++D + +R ++DL AAPGGW QVA + G+ V
Sbjct: 22 DPYVLEAQKAGFRSRAAFKLIEMDEQLHLIRPGMNIIDLGAAPGGWSQVAAAK---GAHV 78
Query: 71 LGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE 130
+GLDL+PI P+ G L+ D + + ++ DLV+ D +PN G + +
Sbjct: 79 VGLDLLPIDPLPGIAFLQMDFMNDDAPEALITTLDGPA----DLVMSDMAPNTTGHQSTD 134
Query: 131 AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190
+ LV + A + L P G+FV KVF+ + +L +K+ F+ V+ KP ASR
Sbjct: 135 HIRIMGLVEAAYDFALEVLRPGGSFVAKVFQGGTQAELLARMKRDFKSVKHIKPKASRKE 194
Query: 191 SAEIYLLGIKYKA 203
SAE Y++ +K
Sbjct: 195 SAEQYVVATGFKG 207
>gi|351728204|ref|ZP_08945895.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Acidovorax radicis N35]
Length = 220
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 110/203 (54%), Gaps = 11/203 (5%)
Query: 8 HRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV-PV 66
H D Y +LA + G+R+RA++KL ++D + ++ + V+DL + PG W Q +R+ P
Sbjct: 18 HVNDTYVKLAHKEGFRARAAYKLKEIDEQLGLIKPGYTVVDLGSTPGAWSQYLRRRMSPA 77
Query: 67 GS-------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDG 119
G+ ++ LDL+P+ PI G + D + + R++ ++ + D+V+ D
Sbjct: 78 GAAAGQLNGTIIALDLLPMEPIEGVTYINGDFREADVLGRLEAALDG---KVVDVVVSDM 134
Query: 120 SPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKV 179
+PN+ G + +A LV +V+ A L P G V K+F YS ++ KQ F+ V
Sbjct: 135 APNLSGIESADAARIAHLVELAVEFACNHLKPDGALVVKLFHGSGYSDLVTLFKQTFKVV 194
Query: 180 EVDKPAASRSASAEIYLLGIKYK 202
+ KP ASR S+E +L+G+ K
Sbjct: 195 KPLKPKASRDKSSETFLVGMGLK 217
>gi|82701616|ref|YP_411182.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Nitrosospira multiformis
ATCC 25196]
gi|123545045|sp|Q2YBT1.1|RLME_NITMU RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|82409681|gb|ABB73790.1| 23S rRNA Um-2552 2'-O-methyltransferase [Nitrosospira multiformis
ATCC 25196]
Length = 206
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 105/192 (54%), Gaps = 3/192 (1%)
Query: 8 HRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVG 67
H D + R AK+ GYRSRA++KL+++ + + V+DL AAPGGW QVA +++
Sbjct: 14 HVNDFFVRQAKKEGYRSRAAYKLMEIAERDHLFKPGMTVVDLGAAPGGWSQVAAEKLKGK 73
Query: 68 SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAW 127
+ LD++ +API G ++ D + A +K+ +++ V DLV+ D SPN+ G
Sbjct: 74 GRAVALDILEMAPISGVTFIQGDFREASVLAELKEQLKDLPV---DLVICDMSPNITGIR 130
Query: 128 AQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAAS 187
+ L +++ T+ L G F+ KVF+ + ++ F +V KP AS
Sbjct: 131 VIDQTRGMHLAELALEFCTEQLNSGGNFLVKVFQGSGFDEFFRAMRATFHRVVTRKPLAS 190
Query: 188 RSASAEIYLLGI 199
R S+EIYLLG+
Sbjct: 191 RGRSSEIYLLGL 202
>gi|448434687|ref|ZP_21586461.1| 23S rRNA methyltransferase J [Halorubrum tebenquichense DSM 14210]
gi|445684683|gb|ELZ37056.1| 23S rRNA methyltransferase J [Halorubrum tebenquichense DSM 14210]
Length = 260
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 104/193 (53%), Gaps = 5/193 (2%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D YY +K+ GYR+R+++KL Q+D + V+DL AAPGGW+QVA + V V
Sbjct: 5 DDYYNRSKQQGYRARSAYKLKQIDEEADLFERGDTVVDLGAAPGGWLQVAAEEVGEAGTV 64
Query: 71 LGLDLVPIAPI--RGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWA 128
+G+DL I + ++ D+T+ R +++ ++E G D+V+ D +PN+ G +
Sbjct: 65 VGVDLQRIDDLDDHDVETIRGDMTEERTRHYLREAVDEEGA---DVVVSDMAPNMTGEYT 121
Query: 129 QEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASR 188
+ L + A + LA G FV KVF+ D + + + F+ V P ASR
Sbjct: 122 LDHARSVHLARQAFDAADELLASGGDFVVKVFQGDDLDAFRDDVSEAFQYVRTVSPPASR 181
Query: 189 SASAEIYLLGIKY 201
+S+E+YL+G Y
Sbjct: 182 DSSSEVYLVGKGY 194
>gi|171059499|ref|YP_001791848.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Leptothrix cholodnii
SP-6]
gi|226703309|sp|B1XXG3.1|RLME_LEPCP RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|170776944|gb|ACB35083.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Leptothrix cholodnii
SP-6]
Length = 232
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 106/209 (50%), Gaps = 16/209 (7%)
Query: 8 HRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVP-- 65
H D Y +LA + GYRSRA++K+ ++D +R V+DL A PG W Q +R
Sbjct: 18 HIHDTYVKLAHKEGYRSRAAYKIKEIDETCGLIRPGQVVVDLGAVPGAWSQYVRRRFAPR 77
Query: 66 -----------VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114
+ ++ LDL+P P+ G L+ D + A++ +++ RA D+
Sbjct: 78 EAGVGGAAAGELNGRIIALDLLPFEPLEGVAFLQGDFCEEAVLAQLVGLLDG---RAVDV 134
Query: 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQ 174
VL D +PN+ G +A LV +++ A L P+G V KVF YS ++ K+
Sbjct: 135 VLSDMAPNLSGVEVTDAARIANLVELALEFAQSHLKPQGALVCKVFHGSGYSQLVDQFKR 194
Query: 175 LFEKVEVDKPAASRSASAEIYLLGIKYKA 203
F V+ KP ASR SAE +L+GI K+
Sbjct: 195 TFRVVKAVKPKASRDRSAETFLVGIGLKS 223
>gi|119713379|gb|ABL97442.1| 23S rRNA methylase [uncultured marine bacterium EB80_69G07]
Length = 203
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 110/191 (57%), Gaps = 5/191 (2%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
K R D Y R +K GYR+R+++KL+++D KF + +V+D+ AAPG W Q A + V
Sbjct: 13 KQRRDTYVRQSKVDGYRARSAYKLIEIDEKFKVFKGGISVIDIGAAPGSWSQYASKVVKN 72
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
G+ ++ +DL + I+ + +E D T+P +A++KK + D+V+ D + N G
Sbjct: 73 GT-IISIDLKKMEKIKNTIQIEGDFTEPNIQAKIKKNLHN----PIDVVMSDMAVNTTGI 127
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+A+ L +++ + ++ KG F+ K+F + ++ ++ K++F +V+V KP +
Sbjct: 128 KDVDAIQTGELCKEAMIFSKDVISEKGIFIAKIFMGRSFNEIVALGKKIFREVKVFKPNS 187
Query: 187 SRSASAEIYLL 197
SR S E +++
Sbjct: 188 SRKDSKESFII 198
>gi|325265685|ref|ZP_08132374.1| ribosomal RNA large subunit methyltransferase J [Kingella
denitrificans ATCC 33394]
gi|324982816|gb|EGC18439.1| ribosomal RNA large subunit methyltransferase J [Kingella
denitrificans ATCC 33394]
Length = 213
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 107/192 (55%), Gaps = 3/192 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y + A++ GYR+RA++KL++++ K ++S + DL +APG W QVA + V
Sbjct: 21 EHVNDPYVQRAQKDGYRARAAYKLLEINEKDKLIKSGTLLADLGSAPGSWSQVAAKLVGP 80
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V LD++P+ I G ++ D + E + + ++ G R DLV+ D +PN+ G
Sbjct: 81 SGQVFALDILPMERIDGVDFIQGDFREDEVLRQFENLL---GNRPLDLVICDMAPNMSGN 137
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ L ++ A L P G+F+ KVF+ Y L ++ LF+ V+ KP A
Sbjct: 138 AVTDQARSYYLCELALDFARNHLKPGGSFLIKVFQGAGYQEYLAEMRSLFQTVQTRKPDA 197
Query: 187 SRSASAEIYLLG 198
SR+ S+EIYLLG
Sbjct: 198 SRNRSSEIYLLG 209
>gi|418532364|ref|ZP_13098272.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Comamonas testosteroni
ATCC 11996]
gi|371450595|gb|EHN63639.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Comamonas testosteroni
ATCC 11996]
Length = 220
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 110/203 (54%), Gaps = 11/203 (5%)
Query: 8 HRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV--- 64
H D Y + A++ GYR+RA++KL ++D ++ H V+DL APG W Q +R+
Sbjct: 18 HINDPYVKAAQKDGYRARAAYKLKEIDESLKLIQPGHTVVDLGCAPGAWSQYVRRRLSPS 77
Query: 65 --PVGSL---VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDG 119
VG L ++ LDL+P+ PI G ++ D + A++++ M G D+V+ D
Sbjct: 78 GAAVGELNGRIISLDLLPMEPIEGVHYIQGDFREEAVLAQLEEAM---GGGKADVVVSDM 134
Query: 120 SPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKV 179
+PN+ G A + L+ +V A + P+G V K+F Y+ ++ KQ F+ V
Sbjct: 135 APNLSGHGATDGARVAVLIEMAVDFAINNMKPEGALVVKLFHGSGYNELVDLFKQTFKVV 194
Query: 180 EVDKPAASRSASAEIYLLGIKYK 202
+ KP ASR S+EI+L+G+ K
Sbjct: 195 KPIKPKASRDRSSEIFLVGMGLK 217
>gi|161830541|ref|YP_001597195.1| ribosomal RNA large subunit methyltransferase J [Coxiella burnetii
RSA 331]
gi|189040687|sp|A9N8M5.1|RLME_COXBR RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|161762408|gb|ABX78050.1| ribosomal RNA large subunit methyltransferase J [Coxiella burnetii
RSA 331]
Length = 212
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 108/191 (56%), Gaps = 1/191 (0%)
Query: 8 HRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVG 67
H D Y + AK+ GY SRA++KL+++ K+ + S V+DL AAPGGW QVA V
Sbjct: 11 HAKDPYVKRAKKEGYPSRAAYKLLEIHQKYKLFKPSMNVIDLGAAPGGWSQVAKDLVGPK 70
Query: 68 SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRA-FDLVLHDGSPNVGGA 126
+V+ +DL+P+ + + ++ D +PE +++ ++ + + DLV+ D +PN+ G
Sbjct: 71 GVVIAIDLLPMQSMLDVIFIQGDFNEPEIFNQLEAIVAKKTLTGQVDLVISDMAPNISGI 130
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ LV + A + LA GTF+ KVF+ L L+ F +V+ KP+A
Sbjct: 131 KNVDQSRSLHLVELAWDCAQKLLARGGTFLVKVFQGPGVDRFLINLRPYFNQVKFLKPSA 190
Query: 187 SRSASAEIYLL 197
SRS S+EIY+L
Sbjct: 191 SRSRSSEIYIL 201
>gi|416178625|ref|ZP_11610653.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis M6190]
gi|416192632|ref|ZP_11616738.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis ES14902]
gi|433492302|ref|ZP_20449396.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
NM586]
gi|433496563|ref|ZP_20453604.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
M7089]
gi|433498623|ref|ZP_20455632.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
M7124]
gi|433500591|ref|ZP_20457577.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
NM174]
gi|433502832|ref|ZP_20459797.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
NM126]
gi|325131968|gb|EGC54667.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis M6190]
gi|325137799|gb|EGC60374.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis ES14902]
gi|432229091|gb|ELK84784.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
NM586]
gi|432234457|gb|ELK90077.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
M7124]
gi|432235263|gb|ELK90879.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
M7089]
gi|432235882|gb|ELK91491.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
NM174]
gi|432240928|gb|ELK96459.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
NM126]
Length = 206
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 106/192 (55%), Gaps = 3/192 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y +A++ GYR+RA++KL++++ K ++ + DL +APG W QVA +
Sbjct: 14 EHVNDHYVHMAQKDGYRARAAYKLLEINEKDKLIKPGTVLADLGSAPGSWSQVAAKLTGT 73
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V LD++P+ I G ++ D + + A+ + ++ R DLV+ D +PN+ G
Sbjct: 74 SGAVFALDILPMEAIGGVSFIQGDFRENDVLAQFEGLLNN---RPLDLVICDMAPNMSGN 130
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ L ++ A+Q L G+F+ KVF+ Y + ++++F V+ KP A
Sbjct: 131 AVSDQARSFYLCELALDFASQHLKTGGSFLVKVFQGAGYQEYMAAMREIFGTVQTRKPEA 190
Query: 187 SRSASAEIYLLG 198
SR+ S+EIYLLG
Sbjct: 191 SRNRSSEIYLLG 202
>gi|448471992|ref|ZP_21601019.1| 23S rRNA methyltransferase J [Halorubrum aidingense JCM 13560]
gi|445820419|gb|EMA70242.1| 23S rRNA methyltransferase J [Halorubrum aidingense JCM 13560]
Length = 263
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 112/205 (54%), Gaps = 8/205 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D YY +K+ GYR+R+++KL QLD + S V+DL AAPGGW+Q+A + V V
Sbjct: 5 DDYYNRSKQQGYRARSAYKLKQLDEEADLFDSGDTVVDLGAAPGGWLQIAAEEVGESGTV 64
Query: 71 LGLDLVPIAPI--RGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWA 128
+G+DL I ++ D+T+ R +++ + E G D+V+ D +PN+ G ++
Sbjct: 65 VGVDLQRIDDFDDHDVETIRGDMTQERTRHYLREAIGERGA---DVVISDMAPNMTGEYS 121
Query: 129 QEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASR 188
+ L + +A + LAP G FV KVF+ +D + ++ F+ + P ASR
Sbjct: 122 LDHARSVHLARQAFDVAEELLAPGGDFVVKVFQGEDLDAFREDVRDEFQYLRTVSPPASR 181
Query: 189 SASAEIYLL--GIKYKAPAKIDPRL 211
+S+E+YL+ G+ AP + RL
Sbjct: 182 DSSSEVYLVAKGL-ITAPVETGDRL 205
>gi|114562160|ref|YP_749673.1| 23S rRNA methyltransferase J [Shewanella frigidimarina NCIMB 400]
gi|122300525|sp|Q086I0.1|RLME_SHEFN RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|114333453|gb|ABI70835.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Shewanella frigidimarina
NCIMB 400]
Length = 209
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 108/195 (55%), Gaps = 3/195 (1%)
Query: 8 HRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVG 67
H D Y +LA++ G RSRA++KL ++ K ++ V+DL AAPGGW QVA +
Sbjct: 17 HFDDHYVKLAQKRGLRSRAAFKLEEIQEKDHLIKQGMTVVDLGAAPGGWSQVAAKLTGDK 76
Query: 68 SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAW 127
V+ D++P+ PI G L+ D + + ++ ++E G D+VL D +PN+ G+
Sbjct: 77 GKVIACDILPMDPIVGVDFLQGDFREDKV---LQALLERVGQDKVDVVLSDMAPNMSGSG 133
Query: 128 AQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAAS 187
A + LV ++ + Q L P G F KVF+ + + + +KQ F+ V+ KP +S
Sbjct: 134 AVDQPRAMYLVELALDMCHQVLTPNGCFAVKVFQGEGFDDYIKTVKQAFKVVKTRKPDSS 193
Query: 188 RSASAEIYLLGIKYK 202
R+ S E+YL+ YK
Sbjct: 194 RARSREVYLVATGYK 208
>gi|66358984|ref|XP_626670.1| ybr061c-like, FtsJ methylase [Cryptosporidium parvum Iowa II]
gi|46228392|gb|EAK89291.1| ybr061c-like, FtsJ methylase [Cryptosporidium parvum Iowa II]
Length = 296
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 24/207 (11%)
Query: 17 AKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGS-------- 68
AK+ G+R+R+++KL+Q+D K++ +DLCAAPG W QV ++ S
Sbjct: 37 AKQEGFRARSAYKLIQIDEKYNIFDKVTRAVDLCAAPGSWSQVLSTKLLNNSEYNEGQPK 96
Query: 69 -------------LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV 115
L++ +DL +API G ++ DIT + V +++E + DLV
Sbjct: 97 ETDQIDSNNGEAPLIVAVDLQEMAPIYGVNIIKGDITS---QLTVSRILEYFQGKKADLV 153
Query: 116 LHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL 175
L DGSP+V G + QN L++ S+ + ++ + GTFV K+FR ++ S + +
Sbjct: 154 LCDGSPDVTGLHDIDEYIQNQLLVSSLSITSKIMRKGGTFVAKIFRGENISRIYQQMFCY 213
Query: 176 FEKVEVDKPAASRSASAEIYLLGIKYK 202
FE V+ KP +SR++S E +++ +K
Sbjct: 214 FELVDCCKPESSRNSSLEAFIVCRYFK 240
>gi|354609708|ref|ZP_09027664.1| Ribosomal RNA large subunit methyltransferase E [Halobacterium sp.
DL1]
gi|353194528|gb|EHB60030.1| Ribosomal RNA large subunit methyltransferase E [Halobacterium sp.
DL1]
Length = 257
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 102/190 (53%), Gaps = 6/190 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D YY +K+ GYR+RA++KL Q+D +F L V+DL AAPGGW+QVA + V
Sbjct: 6 DHYYNKSKQEGYRTRAAYKLQQIDDEFGLLFGGATVVDLGAAPGGWLQVAAEEAGARGRV 65
Query: 71 LGLDLVPIAPI---RGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAW 127
+G+D I I G ++ D+T+ + R ++++ GV D+VL D +PN+ G +
Sbjct: 66 IGVDFQRIDDIDTEAGFQTIRGDMTEEDTREQIRQAAGSSGV---DVVLSDMAPNMTGEY 122
Query: 128 AQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAAS 187
+ L ++ A + L G F KVF QD+ L +++ F P AS
Sbjct: 123 NLDHARSVHLARQALDTAREVLVDGGHFAVKVFDGQDFKEFLADVEEEFAFTRTYTPDAS 182
Query: 188 RSASAEIYLL 197
R +S+E+Y++
Sbjct: 183 RDSSSELYVV 192
>gi|254804677|ref|YP_003082898.1| ribosomal RNA large subunit methyltransferase j [Neisseria
meningitidis alpha14]
gi|385854943|ref|YP_005901456.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis M01-240355]
gi|418288025|ref|ZP_12900548.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis NM233]
gi|418290283|ref|ZP_12902450.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis NM220]
gi|421542207|ref|ZP_15988317.1| ribosomal RNA large subunit methyltransferase E [Neisseria
meningitidis NM255]
gi|421558645|ref|ZP_16004523.1| ribosomal RNA large subunit methyltransferase E [Neisseria
meningitidis 92045]
gi|254668219|emb|CBA04997.1| ribosomal RNA large subunit methyltransferase j [Neisseria
meningitidis alpha14]
gi|254671945|emb|CBA04325.1| cell division protein FtsJ [Neisseria meningitidis alpha275]
gi|325203884|gb|ADY99337.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis M01-240355]
gi|372201873|gb|EHP15748.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis NM220]
gi|372202730|gb|EHP16504.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis NM233]
gi|402318143|gb|EJU53668.1| ribosomal RNA large subunit methyltransferase E [Neisseria
meningitidis NM255]
gi|402337388|gb|EJU72636.1| ribosomal RNA large subunit methyltransferase E [Neisseria
meningitidis 92045]
Length = 206
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 107/192 (55%), Gaps = 3/192 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y +A++ GYR+RA++KL++++ K ++ + DL +APG W QVA +
Sbjct: 14 EHVNDHYVHMAQKDGYRARAAYKLLEINDKDKLIKPGTVLADLGSAPGSWSQVAAKLTGS 73
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V LD++P+ I G ++ D + + A+ + +++ R DLV+ D +PN+ G
Sbjct: 74 SGAVFALDILPMEAIGGVSFIQGDFRENDVLAQFETLLDN---RPLDLVICDMAPNMSGN 130
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ L ++ A+Q L G+F+ KVF+ Y + ++++F V+ KP A
Sbjct: 131 AVSDQARSFYLCELALDFASQHLKTGGSFLVKVFQGAGYQEYMAAMREIFGTVQTRKPEA 190
Query: 187 SRSASAEIYLLG 198
SR+ S+EIYLLG
Sbjct: 191 SRNRSSEIYLLG 202
>gi|76154918|gb|AAX26315.2| SJCHGC03585 protein [Schistosoma japonicum]
Length = 218
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 123/218 (56%), Gaps = 18/218 (8%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHA-----VLDLCAAPGG 55
MGK + + D YYRLAKE G+R+R+++KL+Q+D ++ L S+ V+DLCAAPG
Sbjct: 1 MGK-SSRDKRDIYYRLAKEEGWRARSAYKLLQIDDEYGILSSTENIPLERVVDLCAAPGS 59
Query: 56 WMQVAVQRVPVGSL--------VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEH 107
W QV +R+ ++ +DL +API G + ++ DIT + +++++
Sbjct: 60 WSQVLSKRLWESKSPDDRKSVKIVAVDLQAMAPIPGVIQIQGDITSQD---TAQQIIKHF 116
Query: 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSS 167
+ LV+ DG+P+V G + Q+ L++ ++ + ++ L GTFV KVFR +D
Sbjct: 117 SGKLAQLVVCDGAPDVTGLHDLDEYVQSHLILAALTICSRVLELGGTFVAKVFRGRDSGL 176
Query: 168 VLYCLKQLFE-KVEVDKPAASRSASAEIYLLGIKYKAP 204
+ L+ LF +V KP ASR++S E +++ + P
Sbjct: 177 LGSQLRCLFSGQVSFAKPKASRNSSLESFVVCRGFMGP 214
>gi|119504342|ref|ZP_01626422.1| ribosomal RNA methyltransferase RrmJ/FtsJ [marine gamma
proteobacterium HTCC2080]
gi|119459850|gb|EAW40945.1| ribosomal RNA methyltransferase RrmJ/FtsJ [marine gamma
proteobacterium HTCC2080]
Length = 208
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 110/197 (55%), Gaps = 3/197 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+HR D Y + A + GYRSRA +KL +++ + ++ VLDL AAPGGW QVAV+ V
Sbjct: 14 EHREDLYVQRAVKEGYRSRACYKLKEINDRDRVIKPGMTVLDLGAAPGGWSQVAVEMVGA 73
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ D++P+ + + D T+ A + ++ G A D+VL D +PN+ G
Sbjct: 74 RGRVIASDILPMDSLADVEFILGDFTE---EAVFEALLNLLGESAVDVVLSDMAPNMSGV 130
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
A + LV ++ LATQ L GT V+KVF+ + + +V+ +Q F++V KP A
Sbjct: 131 SAVDQPRSMYLVELALDLATQTLEKGGTLVSKVFQGEGFEAVMSTARQNFDRVLTRKPEA 190
Query: 187 SRSASAEIYLLGIKYKA 203
SR S E+YL+ +K
Sbjct: 191 SRPRSREVYLVASGFKG 207
>gi|394989168|ref|ZP_10382002.1| hypothetical protein SCD_01587 [Sulfuricella denitrificans skB26]
gi|393791587|dbj|GAB71641.1| hypothetical protein SCD_01587 [Sulfuricella denitrificans skB26]
Length = 208
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 104/191 (54%), Gaps = 3/191 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y +LAK GYRSRAS+KL+++ + L+S V+DL A PGGW QV Q++
Sbjct: 13 EHVTDPYVQLAKHEGYRSRASYKLLEIIERDHLLKSVTRVVDLGATPGGWSQVVAQKLAG 72
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ LDL+ + P+ G ++ D + A + K ++ R DLV+ D +PN+ G
Sbjct: 73 QGKVIALDLLEMLPLAGVTFIQGDFREDTVLAELVKALDG---RPVDLVISDMAPNLSGV 129
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ L +++ A Q L P G+F+ KVF+ + + ++ F++V KP A
Sbjct: 130 GLVDQARAMHLAELALEFALQHLKPGGSFLVKVFQGDGFDEYIRTMRGHFKQVATRKPKA 189
Query: 187 SRSASAEIYLL 197
SR + E +LL
Sbjct: 190 SRGRTNETFLL 200
>gi|113969362|ref|YP_733155.1| 23S rRNA methyltransferase J [Shewanella sp. MR-4]
gi|117919471|ref|YP_868663.1| 23S rRNA methyltransferase J [Shewanella sp. ANA-3]
gi|123325253|sp|Q0HLG9.1|RLME_SHESM RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|143461679|sp|A0KTY8.1|RLME_SHESA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|113884046|gb|ABI38098.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Shewanella sp. MR-4]
gi|117611803|gb|ABK47257.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Shewanella sp. ANA-3]
Length = 209
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 109/196 (55%), Gaps = 3/196 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y +LA++ G RSRA++KL +L K +R V+DL AAPGGW Q+AV+
Sbjct: 16 EHFDDHYVKLAQKRGLRSRAAFKLEELQEKDQLIRPGMTVVDLGAAPGGWSQIAVKLTGD 75
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+ D++P+ PI G L+ D + + ++ ++ G D+VL D +PN+ G+
Sbjct: 76 KGKVIACDILPMDPIVGVDFLQGDFREEKV---LEALLTRVGADKVDVVLSDMAPNMSGS 132
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ LV ++ + Q LAP G+F KVF+ + + + +K F+ V+ KP +
Sbjct: 133 DGVDQPRAMYLVELALDMCHQVLAPNGSFAVKVFQGEGFDEYMKAVKDAFKVVKTRKPDS 192
Query: 187 SRSASAEIYLLGIKYK 202
SR+ S E+YL+ YK
Sbjct: 193 SRARSREVYLVATGYK 208
>gi|448611198|ref|ZP_21661832.1| 23S rRNA methyltransferase J [Haloferax mucosum ATCC BAA-1512]
gi|445743630|gb|ELZ95111.1| 23S rRNA methyltransferase J [Haloferax mucosum ATCC BAA-1512]
Length = 257
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 117/216 (54%), Gaps = 7/216 (3%)
Query: 9 RLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGS 68
R D YY AK+ GYR+R+++KL QLD + V+DL AAPGGW+QVA +RV
Sbjct: 3 RKDHYYNKAKQEGYRARSAYKLKQLDEDAGLFGPGNTVVDLGAAPGGWLQVASERVGDHG 62
Query: 69 LVLGLDLVPIAPI--RGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V+G+DL I + ++ D+T+ E + R+ + E G D V+ D +PN+ G
Sbjct: 63 KVVGVDLQRIRDLDHHNIETIRGDMTEDETKERLTASIGEAGA---DAVVSDMAPNMTGE 119
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
++ + L + ++A + LA G F KVF QD + ++ F+ V +P A
Sbjct: 120 YSLDHARSIYLARQAFEVAQELLATGGDFAVKVFDGQDLADFRADMEPEFQYVRSIRPKA 179
Query: 187 SRSASAEIYLLGIKY-KAPAKIDPRLLDVKYLFQGS 221
SR +S+E YL+G + AP ++ LDV+ + GS
Sbjct: 180 SRDSSSEQYLVGKHFLTAPVRVGDE-LDVEIVDVGS 214
>gi|157376529|ref|YP_001475129.1| 23S rRNA methyltransferase [Shewanella sediminis HAW-EB3]
gi|189040340|sp|A8FYS8.1|RLME_SHESH RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|157318903|gb|ABV38001.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Shewanella sediminis
HAW-EB3]
Length = 209
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 109/200 (54%), Gaps = 11/200 (5%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y +LA++ G+RSRA++K+ ++ K +R V+DL AAPGGW QVAV+
Sbjct: 16 EHFDDHYVKLAQKRGFRSRAAFKIEEIQEKDKLIRPGMTVVDLGAAPGGWSQVAVKLAGD 75
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRA----FDLVLHDGSPN 122
V+ D++P+ PI G L+ D R +KV++ R D+VL D +PN
Sbjct: 76 NGKVIACDILPMDPIVGVDFLQGDF-------REEKVLDALLTRVGDAKVDVVLSDMAPN 128
Query: 123 VGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVD 182
+ G + LV ++ + Q LAP G F KVF+ + + + +++ F+ V+
Sbjct: 129 MSGTGGVDQPRAMYLVELALDMCHQVLAPNGCFAVKVFQGEGFEEYMKSVREAFKTVKTR 188
Query: 183 KPAASRSASAEIYLLGIKYK 202
KP +SR+ S E+YL+ YK
Sbjct: 189 KPDSSRARSREVYLVATGYK 208
>gi|308464733|ref|XP_003094631.1| hypothetical protein CRE_31467 [Caenorhabditis remanei]
gi|308247098|gb|EFO91050.1| hypothetical protein CRE_31467 [Caenorhabditis remanei]
Length = 227
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 109/197 (55%), Gaps = 9/197 (4%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D++ A+EH YR+R+++KL+++D KF FL+ V+D+ APG W+QV V++ P G V
Sbjct: 35 DEFAVKAREHNYRARSAFKLMEIDEKFKFLKPESTVIDIGCAPGSWIQVVVEKCPNG-YV 93
Query: 71 LGLDLVPIAPIRGAVSLEQ-DITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQ 129
LG+DL + PIRGA L Q D+T PE ++++ ++ R D+VL D +PN G A
Sbjct: 94 LGVDLQNVLPIRGAEILSQSDVTSPEVHLKIREKLKN---RQLDVVLSDMAPNPTGDNAT 150
Query: 130 EAMSQNALVIDSVKLATQ----FLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPA 185
+ + L +L ++ L G F+ K++ + L + F V+ KP
Sbjct: 151 DHLRLIELCRTVFRLFSEENCIELKRNGVFLCKIWDGAARGDFIRELSERFATVKTVKPT 210
Query: 186 ASRSASAEIYLLGIKYK 202
A R SAE+YL +K
Sbjct: 211 ACRDNSAEMYLFCRGFK 227
>gi|300795838|ref|NP_001178187.1| putative ribosomal RNA methyltransferase 2 [Bos taurus]
gi|296473105|tpg|DAA15220.1| TPA: FtsJ homolog 2-like [Bos taurus]
Length = 244
Score = 114 bits (285), Expect = 2e-22, Method: Composition-based stats.
Identities = 72/207 (34%), Positives = 111/207 (53%), Gaps = 14/207 (6%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV-- 64
+H D + + AK YR R+++KL++++ + LR VLD AAPG W QVAVQRV
Sbjct: 37 RHLRDPFVKAAKVESYRCRSAFKLLEMNERHQILRPGLRVLDCGAAPGAWSQVAVQRVNA 96
Query: 65 -------PVGSLVLGLDLVPIAPIRGAVSL-EQDITKPECRARVKKVMEEHGVRAFDLVL 116
PVG VLG+DL+ I P+ GA L D+T P ++++++ G RA D++L
Sbjct: 97 AGTDPSAPVG-FVLGVDLLHIFPLEGATFLCPADVTDPRTFRKIQELLP--GGRA-DVIL 152
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
D +PN G + + +L + + + L P+GTF+ K + + L Q F
Sbjct: 153 SDMAPNATGIRSLDHDRLISLCLSLLDMVPDVLHPRGTFLCKTWAGSQSQRLQKRLTQEF 212
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKA 203
+ KP ASR S+E+YLL +Y+
Sbjct: 213 QNTRTVKPEASRKESSEVYLLATQYRG 239
>gi|357384019|ref|YP_004898743.1| cell division protein FtsJ / ribosomal RNA large subunit
methyltransferase J [Pelagibacterium halotolerans B2]
gi|351592656|gb|AEQ50993.1| cell division protein FtsJ / ribosomal RNA large subunit
methyltransferase J [Pelagibacterium halotolerans B2]
Length = 238
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 105/196 (53%), Gaps = 6/196 (3%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV---PVG 67
D Y A+ G+R+R+++KL++LD K+ L+ V+DL AAPGGW QVAV+ V P
Sbjct: 42 DPYVARARAEGWRARSAYKLLELDEKYELLKPGMRVVDLGAAPGGWCQVAVKAVKSDPEN 101
Query: 68 SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAW 127
V+G+D + + P+ GA L++D T + + ++ H D+VL D + G
Sbjct: 102 PTVVGIDYLEMDPVPGAALLQKDFTDEDAPQALFDLLGGHKA---DIVLSDMAAPTTGHK 158
Query: 128 AQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAAS 187
+ + ALV + A LAP GTFV KVF+ +L LK+ F KP +S
Sbjct: 159 PTDHLRIIALVEIAADYALDVLAPGGTFVAKVFQGGTEHELLAMLKRNFATTFHAKPPSS 218
Query: 188 RSASAEIYLLGIKYKA 203
RS SAE YL+ +K
Sbjct: 219 RSESAETYLIARGFKG 234
>gi|39979231|emb|CAE85601.1| probable tRNA 2'-O-ribose methyltransferase [Neurospora crassa]
Length = 318
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 104/191 (54%), Gaps = 14/191 (7%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQV- 59
MGK K + D YYRLAKE G+R+R+++KL+QLD +F+ + V+DLCAAPG W QV
Sbjct: 1 MGK-SSKDKRDAYYRLAKEQGWRARSAFKLLQLDEEFNLFENVTRVVDLCAAPGSWSQVL 59
Query: 60 AVQRVPVG---SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKK---------VMEEH 107
+ + P ++ +DL PI+P+ G ++L DIT P + K M
Sbjct: 60 SRESTPAPREQVKIVSIDLQPISPLPGIITLRADITHPATVPLLLKALDPDFDPSTMNPQ 119
Query: 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSS 167
DLV+ DG+P+V G + Q+ L+ ++ LA L P G FV K+FR ++
Sbjct: 120 ASHPVDLVISDGAPDVTGLHDLDIYVQSQLLFAALNLALCVLKPGGKFVAKIFRGRNVDL 179
Query: 168 VLYCLKQLFEK 178
+ LK FEK
Sbjct: 180 LYAQLKVFFEK 190
>gi|448312389|ref|ZP_21502135.1| 23S rRNA methyltransferase J [Natronolimnobius innermongolicus JCM
12255]
gi|445601774|gb|ELY55757.1| 23S rRNA methyltransferase J [Natronolimnobius innermongolicus JCM
12255]
Length = 260
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 108/206 (52%), Gaps = 10/206 (4%)
Query: 9 RLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGS 68
R D YY AK+ GYRSRA++KL QLD + + V+DL AAPGGW+QVA ++V
Sbjct: 3 RKDDYYNRAKQEGYRSRAAYKLKQLDDLENVINGGDTVVDLGAAPGGWLQVAAEKVGPRG 62
Query: 69 LVLGLDLVPIAPIRGAV-----SLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNV 123
V+G+DL I + G + ++ D+T+ R R V++ G D V+ D +PN+
Sbjct: 63 NVIGVDLQRIKDLEGTIDERVETIRGDMTEDRTRER---VIDAAGGEV-DAVVSDMAPNM 118
Query: 124 GGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDK 183
G ++ + L + + A + L G FV KVF D + L F+ V
Sbjct: 119 SGEYSLDQARSLYLARQAFETALELLDTGGNFVVKVFEGPDVDDLRADLDDEFQYVRATA 178
Query: 184 PAASRSASAEIYLLGIKYKAPAKIDP 209
P ASR S+EIYL+G K + A + P
Sbjct: 179 PKASRDESSEIYLIG-KGRLTAPVRP 203
>gi|357976399|ref|ZP_09140370.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Sphingomonas sp. KC8]
Length = 241
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 105/199 (52%), Gaps = 11/199 (5%)
Query: 11 DKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLV 70
D Y R AK GYRSRA++KL++LD +F L+ V+DL APGGW QV V+R + +
Sbjct: 42 DPYVRRAKAEGYRSRAAYKLIELDERFHLLKGVSRVIDLGIAPGGWSQV-VRRTAPKAAI 100
Query: 71 LGLDLVPIAPIRGAVSLEQDI---TKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAW 127
+G+DL+P+ PI G + D P+ + E G +A DLVL D + N G
Sbjct: 101 VGIDLLPVDPIDGVTIFQMDFMDDAAPDL------LTEALGGKA-DLVLSDMAANTTGHP 153
Query: 128 AQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAAS 187
+ + ALV A L P G +V KV + ++ LK+LF V+ KP AS
Sbjct: 154 QTDHLRTMALVETGCAFAADILRPGGAYVAKVLAGGADNDLVAELKRLFTTVKHAKPPAS 213
Query: 188 RSASAEIYLLGIKYKAPAK 206
R S+E Y++ +K A+
Sbjct: 214 RKDSSEWYVIAQGFKGRAQ 232
>gi|349609395|ref|ZP_08888790.1| ribosomal RNA large subunit methyltransferase E [Neisseria sp.
GT4A_CT1]
gi|348611956|gb|EGY61584.1| ribosomal RNA large subunit methyltransferase E [Neisseria sp.
GT4A_CT1]
Length = 206
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 106/192 (55%), Gaps = 3/192 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y +A++ GYR+RA++KL++++ K ++ + DL +APG W QVA + V
Sbjct: 14 EHVNDHYVHMAQKDGYRARAAYKLLEINGKDKLIKPGTVLADLGSAPGSWSQVAAKLVGN 73
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V LD++P+ I G ++ D + E A+ + +++ R DLV+ D +PN+ G
Sbjct: 74 SGRVFALDILPMDEIEGVSFIQGDFREDEVLAQFETLLD---ARPLDLVICDMAPNMSGN 130
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ L ++ A L G+F+ KVF+ Y + ++++F V+ KP A
Sbjct: 131 AVTDQARSFYLCELALDFAVNHLKTGGSFLVKVFQGAGYQEYMAAMREIFGTVQTRKPEA 190
Query: 187 SRSASAEIYLLG 198
SR+ S+EIYLLG
Sbjct: 191 SRNRSSEIYLLG 202
>gi|197334812|ref|YP_002155234.1| 23S rRNA methyltransferase J [Vibrio fischeri MJ11]
gi|423685191|ref|ZP_17659999.1| 23S rRNA methyltransferase J [Vibrio fischeri SR5]
gi|226705320|sp|B5FA72.1|RLME_VIBFM RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|197316302|gb|ACH65749.1| ribosomal RNA large subunit methyltransferase J [Vibrio fischeri
MJ11]
gi|371495692|gb|EHN71287.1| 23S rRNA methyltransferase J [Vibrio fischeri SR5]
Length = 209
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 113/202 (55%), Gaps = 3/202 (1%)
Query: 2 GKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAV 61
G+ +H DKY A++ GYRSRA +K+ ++ +K L+S V+DL AAPGGW Q AV
Sbjct: 11 GRWLKEHFDDKYVLEAQKRGYRSRAIFKIEEIQNKDKLLKSGMTVVDLGAAPGGWSQYAV 70
Query: 62 QRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
++V V+ D++P+ I G L+ D + A + ++E D+V+ D +P
Sbjct: 71 EQVGDEGQVIACDILPMDSIAGVSFLQGDFRE---EAVLDALLERIQPDMVDVVMSDMAP 127
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
N+ G A + LV ++ + Q LAP G+F KVF+ + + L ++ +F+ V++
Sbjct: 128 NMSGNLAVDQPRAMYLVELALDMCRQVLAPNGSFTVKVFQGEGFDQYLQEVRNMFKVVKI 187
Query: 182 DKPAASRSASAEIYLLGIKYKA 203
KP +SR+ S E+Y++ YK
Sbjct: 188 RKPDSSRARSREVYIVATGYKG 209
>gi|121634592|ref|YP_974837.1| cell division protein [Neisseria meningitidis FAM18]
gi|433494379|ref|ZP_20451449.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
NM762]
gi|158513144|sp|A1KT57.1|RLME_NEIMF RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|120866298|emb|CAM10039.1| putative cell division protein [Neisseria meningitidis FAM18]
gi|432231053|gb|ELK86723.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
NM762]
Length = 206
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 105/192 (54%), Gaps = 3/192 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y +A++ GYR+RA++KL++++ K ++ + DL +APG W QVA +
Sbjct: 14 EHVNDHYVHMAQKDGYRARAAYKLLEINEKDKLIKPGTVLADLGSAPGSWSQVAAKLTGT 73
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V LD++P+ I G ++ D + + A+ + ++ R DLV+ D +PN+ G
Sbjct: 74 SGAVFALDILPMEAIGGVSFIQGDFRENDVLAQFEGLLNN---RPLDLVICDMAPNMSGN 130
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ L ++ A+Q L G+F+ KVF+ Y + +++ F V+ KP A
Sbjct: 131 AVSDQARSFYLCELALDFASQHLKTGGSFLVKVFQGAGYQEYMAAMREFFGTVQTRKPEA 190
Query: 187 SRSASAEIYLLG 198
SR+ S+EIYLLG
Sbjct: 191 SRNRSSEIYLLG 202
>gi|345097009|gb|AEN68006.1| cell division protein [Heliconius numata aurora]
Length = 247
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 122/220 (55%), Gaps = 17/220 (7%)
Query: 16 LAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSL------ 69
+++E G+R+R+++KL+Q++ +++ +DLCAAPG W QV +++ +
Sbjct: 1 VSEEEGWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQVLTKKLRQNTSNTDDVK 60
Query: 70 VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQ 129
++ +DL +A + G ++ DITK + K E G++A DLV+ DG+P+V G
Sbjct: 61 IVAVDLQAMAALPGVKQIQGDITKISTAHEIIK--EFEGLKA-DLVVCDGAPDVTGLHDI 117
Query: 130 EAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRS 189
+ Q+ L++ ++ + T L G FV K+FR +D + + LK F+ V V KP +SR+
Sbjct: 118 DEYVQSQLLLAALNITTHVLKEGGVFVAKIFRGKDVTLLYSQLKXFFDFVTVSKPRSSRN 177
Query: 190 ASAEIYLLGIKYKAPAKIDPR----LLDVKYL----FQGS 221
+S E +++ YKAP P LLD KY F GS
Sbjct: 178 SSIEAFVICQNYKAPPGYVPTMVNPLLDHKYCNFNQFTGS 217
>gi|13386002|ref|NP_080786.1| putative ribosomal RNA methyltransferase 2 [Mus musculus]
gi|81880352|sp|Q9CPY0.1|RRMJ2_MOUSE RecName: Full=Putative ribosomal RNA methyltransferase 2; AltName:
Full=Protein ftsJ homolog 2; AltName: Full=rRNA
(uridine-2'-O-)-methyltransferase
gi|12844585|dbj|BAB26420.1| unnamed protein product [Mus musculus]
gi|12856472|dbj|BAB30680.1| unnamed protein product [Mus musculus]
gi|26346843|dbj|BAC37070.1| unnamed protein product [Mus musculus]
gi|40555804|gb|AAH64776.1| FtsJ homolog 2 (E. coli) [Mus musculus]
gi|74219034|dbj|BAE26662.1| unnamed protein product [Mus musculus]
gi|148687177|gb|EDL19124.1| FtsJ homolog 2 (E. coli) [Mus musculus]
Length = 246
Score = 114 bits (285), Expect = 2e-22, Method: Composition-based stats.
Identities = 75/207 (36%), Positives = 107/207 (51%), Gaps = 14/207 (6%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV-- 64
+H D + + AK YR R+++KL++++ K LR VLD AAPG W QVAVQRV
Sbjct: 37 RHLKDPFVKAAKVESYRCRSAFKLLEMNEKHQILRPGLRVLDCGAAPGAWSQVAVQRVNA 96
Query: 65 -------PVGSLVLGLDLVPIAPIRGAVSL-EQDITKPECRARVKKVMEEHGVRAFDLVL 116
PVG VLG+DL+ I P+ GA L D+T P +K++E R D++L
Sbjct: 97 TGADSSSPVG-FVLGVDLLHIFPLAGATFLCPADVTDPRT---FQKILELLPSRRADVIL 152
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
D +PN G + +L + V +A L P GT + K + + L Q F
Sbjct: 153 SDMAPNATGIRDLDHDKLISLCLTLVDMAVDILHPGGTLLCKTWAGSKSHLLQKRLTQEF 212
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKA 203
+ V KP ASR S+E+YLL +Y+
Sbjct: 213 QSTRVVKPEASRKESSEVYLLATQYRG 239
>gi|359394206|ref|ZP_09187259.1| Ribosomal RNA large subunit methyltransferase E [Halomonas
boliviensis LC1]
gi|357971453|gb|EHJ93898.1| Ribosomal RNA large subunit methyltransferase E [Halomonas
boliviensis LC1]
Length = 187
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 107/185 (57%), Gaps = 3/185 (1%)
Query: 19 EHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI 78
+ GYRSRAS+KL++LD K LR V+DL AAPGGW Q+A +RV +V+ D++ +
Sbjct: 6 QDGYRSRASYKLIELDEKDKLLRPGMTVIDLGAAPGGWSQIAAERVGPEGVVIASDILEM 65
Query: 79 APIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALV 138
+ G ++ D T+ A ++ +++ R DLV+ D +PN+ G A + LV
Sbjct: 66 DALAGVDFIQGDFTE---EAVLEAILKRLDNRRVDLVMSDMAPNMSGMAAIDQPQAMYLV 122
Query: 139 IDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASAEIYLLG 198
+++LA + L+P G F+ KVF+ + + + L L+ F KV KP ASR+ S E+Y L
Sbjct: 123 ELALELARETLSPGGRFLAKVFQGEGFDAYLKELRGSFSKVVTRKPDASRARSREVYFLA 182
Query: 199 IKYKA 203
++
Sbjct: 183 EGFRG 187
>gi|395792525|ref|ZP_10471952.1| ribosomal RNA large subunit methyltransferase E [Bartonella
vinsonii subsp. arupensis Pm136co]
gi|395432498|gb|EJF98484.1| ribosomal RNA large subunit methyltransferase E [Bartonella
vinsonii subsp. arupensis Pm136co]
Length = 240
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 112/206 (54%), Gaps = 11/206 (5%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y +K GYRSRA++KL++++ ++ FL+ ++DL AAPGGW QVAV RV V
Sbjct: 41 RHLNDPYVHQSKVDGYRSRAAYKLIEINERYKFLKKGQKIIDLGAAPGGWCQVAV-RV-V 98
Query: 67 GS-----LVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121
GS V+G+D + + P+ G V L+ D + ++ + E D+VL D +
Sbjct: 99 GSNDQKPSVVGIDYLHVNPLPGVVMLKMDFLHADAPQKLIDALGEKP----DVVLSDMAA 154
Query: 122 NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181
G + + L + A L P G F+ K F+ +++L LKQ F+ V
Sbjct: 155 PTTGHRQTDHLRTVYLCEVAADFALSVLKPGGHFLAKAFQGGAENTLLTTLKQNFKTVHH 214
Query: 182 DKPAASRSASAEIYLLGIKYKAPAKI 207
KP ASRS S E+YLL +++K A++
Sbjct: 215 VKPPASRSESVELYLLALRFKGKAEV 240
>gi|198453132|ref|XP_001359081.2| GA18746 [Drosophila pseudoobscura pseudoobscura]
gi|198132224|gb|EAL28224.2| GA18746 [Drosophila pseudoobscura pseudoobscura]
Length = 304
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 131/261 (50%), Gaps = 17/261 (6%)
Query: 1 MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA 60
MGK K + D YYR AKE G+R+R+++KL+ + + L +DLCAAPG W QV
Sbjct: 1 MGKTS-KDKRDIYYRQAKEEGWRARSAFKLLHIHDAYGILNGVRRAVDLCAAPGSWSQVL 59
Query: 61 VQRV---------PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRA 111
+++ + ++ +DL +APIRG + L+ DITK + G
Sbjct: 60 SRKLYDTCQNDAEKSATKIIAVDLQAMAPIRGVLQLQGDITKESTAEAIISHFSADGQEK 119
Query: 112 FDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYC 171
LV+ DG+P+V G + Q+ L++ ++ +AT L G+FV K+F+ +
Sbjct: 120 AQLVVCDGAPDVTGVHEMDEYMQHQLLVSALSIATVVLETGGSFVAKIFQGNATGLLSTQ 179
Query: 172 LKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLL-----DVKYLFQ--GSVEP 224
+K F K ++ KP +SRS+S E +++ + P P+++ D++ L Q GS
Sbjct: 180 MKIFFNKFDIYKPPSSRSSSIESFVVCSDFCLPPGYIPQVINTARDDIRVLAQKTGSDVN 239
Query: 225 RKVVDVLRGTKQKRHRDGYED 245
R +V + H + ED
Sbjct: 240 RHLVPFIACGDLDGHNNHSED 260
>gi|291415281|ref|XP_002723882.1| PREDICTED: FtsJ homolog 2 [Oryctolagus cuniculus]
Length = 740
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 109/207 (52%), Gaps = 14/207 (6%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRV-- 64
+H D + + A+ YR R+++KL+++D K LR VLD AAPG W QVAVQRV
Sbjct: 37 RHLRDPFVKAARAESYRCRSAFKLLEMDRKHRILRPGLRVLDCGAAPGSWSQVAVQRVNA 96
Query: 65 -------PVGSLVLGLDLVPIAPIRGAVSL-EQDITKPECRARVKKVMEEHGVRAFDLVL 116
PVG VLG+D++ + P+ GA L D+ P R+++++ GV D+VL
Sbjct: 97 AGTDPSSPVG-FVLGVDVLHVFPLEGATFLCPADVMDPGAWPRIRELL-PGGV--ADVVL 152
Query: 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176
D +PN G A + +L + V LA L P GT + K + + L++ F
Sbjct: 153 SDMAPNATGIRALDHDRLISLCLALVDLAPDLLQPGGTLLCKTWAGSQSHRLQSRLREEF 212
Query: 177 EKVEVDKPAASRSASAEIYLLGIKYKA 203
V KP ASR SAE+YLL +++
Sbjct: 213 LSVRAVKPEASRKESAEVYLLATQHRG 239
>gi|419795754|ref|ZP_14321335.1| ribosomal RNA large subunit methyltransferase J [Neisseria sicca
VK64]
gi|385700117|gb|EIG30373.1| ribosomal RNA large subunit methyltransferase J [Neisseria sicca
VK64]
Length = 206
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 106/192 (55%), Gaps = 3/192 (1%)
Query: 7 KHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV 66
+H D Y +A++ GYR+RA++KL++++ K ++ + DL +APG W QVA + V
Sbjct: 14 EHVNDHYVHMAQKDGYRARAAYKLLEINEKDKLIKPGTVLADLGSAPGSWSQVAAKLVGN 73
Query: 67 GSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA 126
V LD++P+ I G ++ D + E A+ + +++ R DLV+ D +PN+ G
Sbjct: 74 SGRVFALDILPMDEIEGVSFIQGDFREDEVLAQFETLLD---ARPLDLVICDMAPNMSGN 130
Query: 127 WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186
+ L ++ A L G+F+ KVF+ Y + ++++F V+ KP A
Sbjct: 131 AVTDQARSFYLCELALDFAVNHLKTGGSFLVKVFQGAGYQEYMAAMREIFGTVQTRKPEA 190
Query: 187 SRSASAEIYLLG 198
SR+ S+EIYLLG
Sbjct: 191 SRNRSSEIYLLG 202
>gi|226705314|sp|B8CKG5.1|RLME_SHEPW RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|212555550|gb|ACJ28004.1| Ribosomal RNA large subunit methyltransferase J [Shewanella
piezotolerans WP3]
Length = 209
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 107/199 (53%), Gaps = 11/199 (5%)
Query: 8 HRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVG 67
H D Y +LA++ G+RSRA++K+ ++ K +R V+DL AAPGGW QVAV+
Sbjct: 17 HFDDHYVKLAQKRGFRSRAAFKIEEIQEKDKLIRPGMTVVDLGAAPGGWSQVAVKLAGDK 76
Query: 68 SLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRA----FDLVLHDGSPNV 123
V+ D++P+ PI G L+ D R +KV++ R D+VL D +PN+
Sbjct: 77 GKVIACDILPMDPIVGVDFLQGDF-------REEKVLDALLTRVGDAKVDVVLSDMAPNM 129
Query: 124 GGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDK 183
G + LV ++ + Q LAP G F KVF+ + + + +K+ F+ V+ K
Sbjct: 130 SGTGGVDQPRAMYLVELALDMCHQVLAPNGCFAVKVFQGEGFDEYMKAVKEAFKTVKTRK 189
Query: 184 PAASRSASAEIYLLGIKYK 202
P +SR S E+YL+ YK
Sbjct: 190 PDSSRPRSREVYLVATGYK 208
>gi|345096995|gb|AEN67999.1| cell division protein [Heliconius numata arcuella]
gi|345097025|gb|AEN68014.1| cell division protein [Heliconius numata aurora]
gi|345097063|gb|AEN68033.1| cell division protein [Heliconius numata silvana]
gi|345097067|gb|AEN68035.1| cell division protein [Heliconius numata silvana]
Length = 247
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 122/220 (55%), Gaps = 17/220 (7%)
Query: 16 LAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSL------ 69
+++E G+R+R+++KL+Q++ +++ +DLCAAPG W QV +++ +
Sbjct: 1 VSEEEGWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQVLTKKLRQNTSNTDDVK 60
Query: 70 VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQ 129
++ +DL +A + G ++ DITK + K E G++A DLV+ DG+P+V G
Sbjct: 61 IVAVDLQAMAALPGVKQIQGDITKISTAHEIIK--EFEGLKA-DLVVCDGAPDVTGLHDI 117
Query: 130 EAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRS 189
+ Q+ L++ ++ + T L G FV K+FR +D + + LK F+ V V KP +SR+
Sbjct: 118 DEYVQSQLLLAALNITTHVLKEXGVFVAKIFRGKDVTLLYSQLKLFFDFVTVSKPRSSRN 177
Query: 190 ASAEIYLLGIKYKAPAKIDPR----LLDVKYL----FQGS 221
+S E +++ YKAP P LLD KY F GS
Sbjct: 178 SSIEAFVICQNYKAPPGYVPTMVNPLLDHKYCNFNQFTGS 217
>gi|345097019|gb|AEN68011.1| cell division protein [Heliconius numata aurora]
Length = 247
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 122/220 (55%), Gaps = 17/220 (7%)
Query: 16 LAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSL------ 69
+++E G+R+R+++KL+Q++ +++ +DLCAAPG W QV +++ +
Sbjct: 1 VSEEEGWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQVLTKKLRQNTSNTDDVK 60
Query: 70 VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQ 129
++ +DL +A + G ++ DITK + K E G++A DLV+ DG+P+V G
Sbjct: 61 IVAVDLQAMAALPGVKQIQGDITKISTAHEIIK--EFEGLKA-DLVVCDGAPDVTGLHDI 117
Query: 130 EAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRS 189
+ Q+ L++ ++ + T L G FV K+FR +D + + LK F+ V V KP +SR+
Sbjct: 118 DEYVQSQLLLAALNITTHVLKEGGVFVAKIFRGKDVTLLYSQLKLFFDFVTVSKPRSSRN 177
Query: 190 ASAEIYLLGIKYKAPAKIDPR----LLDVKYL----FQGS 221
+S E +++ YKAP P LLD KY F GS
Sbjct: 178 SSIEAFVICQNYKAPPGYVPTMVNPLLDHKYCNFNQFTGS 217
>gi|345097003|gb|AEN68003.1| cell division protein [Heliconius numata aurora]
Length = 247
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 122/220 (55%), Gaps = 17/220 (7%)
Query: 16 LAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSL------ 69
+++E G+R+R+++KL+Q++ +++ +DLCAAPG W QV +++ +
Sbjct: 1 VSEEEGWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQVLTKKLRQNTSNTDDVK 60
Query: 70 VLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQ 129
++ +DL +A + G ++ DITK + K E G++A DLV+ DG+P+V G
Sbjct: 61 IVAVDLQAMAALPGVKQIQGDITKISTAHEIIK--EFEGLKA-DLVVCDGAPDVTGLHDI 117
Query: 130 EAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRS 189
+ Q+ L++ ++ + T L G FV K+FR +D + + LK F+ V V KP +SR+
Sbjct: 118 DEYVQSQLLLAALNITTHVLKEGGVFVAKIFRGKDVTLLYSQLKLFFDFVTVSKPRSSRN 177
Query: 190 ASAEIYLLGIKYKAPAKIDPR----LLDVKYL----FQGS 221
+S E +++ YKAP P LLD KY F GS
Sbjct: 178 SSIEAFVICQNYKAPPGYVPTMVNPLLDHKYCNFNQFTGS 217
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.129 0.358
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,979,077,786
Number of Sequences: 23463169
Number of extensions: 570727248
Number of successful extensions: 2689649
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2919
Number of HSP's successfully gapped in prelim test: 20464
Number of HSP's that attempted gapping in prelim test: 2434063
Number of HSP's gapped (non-prelim): 146266
length of query: 832
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 681
effective length of database: 8,816,256,848
effective search space: 6003870913488
effective search space used: 6003870913488
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 81 (35.8 bits)