Query 003302
Match_columns 832
No_of_seqs 338 out of 1987
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 20:33:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003302.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003302hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dou_A Ribosomal RNA large sub 100.0 1.6E-36 5.3E-41 306.9 19.8 184 19-205 2-185 (191)
2 3gcz_A Polyprotein; flavivirus 100.0 4.4E-31 1.5E-35 279.6 14.4 166 20-204 69-247 (282)
3 2px2_A Genome polyprotein [con 100.0 1.8E-31 6.2E-36 278.4 10.7 164 20-203 52-228 (269)
4 3evf_A RNA-directed RNA polyme 100.0 2.7E-30 9.2E-35 273.3 15.7 165 21-204 54-230 (277)
5 2plw_A Ribosomal RNA methyltra 100.0 1.5E-29 5.1E-34 253.4 20.3 183 21-206 1-201 (201)
6 3eld_A Methyltransferase; flav 100.0 4.5E-30 1.5E-34 273.3 15.7 166 20-204 60-237 (300)
7 2nyu_A Putative ribosomal RNA 100.0 8.6E-28 3E-32 239.3 20.4 184 21-207 1-193 (196)
8 1ej0_A FTSJ; methyltransferase 99.9 5.1E-23 1.8E-27 198.4 22.1 180 21-203 1-180 (180)
9 2oxt_A Nucleoside-2'-O-methylt 99.9 4.5E-24 1.5E-28 226.9 13.8 159 21-204 54-231 (265)
10 3p8z_A Mtase, non-structural p 99.9 1.2E-23 4.3E-28 216.2 16.3 156 20-197 57-225 (267)
11 2p41_A Type II methyltransfera 99.9 9.4E-24 3.2E-28 228.7 14.5 161 20-204 61-237 (305)
12 3r24_A NSP16, 2'-O-methyl tran 99.9 2.4E-23 8.3E-28 219.6 10.9 162 41-219 108-277 (344)
13 2wa2_A Non-structural protein 99.9 7.5E-23 2.6E-27 218.7 14.0 158 21-203 62-238 (276)
14 3lkz_A Non-structural protein 99.9 1.9E-21 6.4E-26 206.0 14.4 158 21-199 74-245 (321)
15 2xyq_A Putative 2'-O-methyl tr 99.8 4E-21 1.4E-25 206.7 9.8 164 37-219 58-231 (290)
16 3lpm_A Putative methyltransfer 99.6 1.1E-14 3.7E-19 152.6 12.1 172 37-221 43-236 (259)
17 2hwk_A Helicase NSP2; rossman 99.5 1.5E-14 5.2E-19 151.8 11.2 140 49-206 148-302 (320)
18 2ozv_A Hypothetical protein AT 99.5 3.7E-14 1.2E-18 149.3 11.3 173 40-220 34-228 (260)
19 4auk_A Ribosomal RNA large sub 99.5 1.1E-13 3.7E-18 152.7 11.8 89 20-122 182-281 (375)
20 3id6_C Fibrillarin-like rRNA/T 99.4 6E-13 2.1E-17 138.8 11.4 140 21-182 56-214 (232)
21 3hp7_A Hemolysin, putative; st 99.3 1.4E-11 5E-16 132.4 11.2 157 20-200 63-249 (291)
22 1ixk_A Methyltransferase; open 99.2 1.3E-11 4.5E-16 133.7 9.8 125 40-175 116-265 (315)
23 3mti_A RRNA methylase; SAM-dep 99.2 9.6E-11 3.3E-15 115.3 12.7 109 40-163 20-139 (185)
24 2frx_A Hypothetical protein YE 99.2 3.9E-11 1.3E-15 137.5 11.2 124 42-175 117-265 (479)
25 3m4x_A NOL1/NOP2/SUN family pr 99.2 2.1E-11 7.2E-16 138.7 8.7 126 40-175 103-253 (456)
26 3ajd_A Putative methyltransfer 99.2 2.8E-11 9.6E-16 128.3 9.1 129 40-175 81-230 (274)
27 2b3t_A Protein methyltransfera 99.2 1.2E-10 4.2E-15 122.8 13.5 143 41-201 108-276 (276)
28 3m6w_A RRNA methylase; rRNA me 99.2 2.2E-11 7.6E-16 138.8 7.9 125 40-175 99-248 (464)
29 3eey_A Putative rRNA methylase 99.2 7.9E-11 2.7E-15 117.1 10.9 152 40-205 20-192 (197)
30 4dzr_A Protein-(glutamine-N5) 99.2 9.3E-11 3.2E-15 116.8 11.1 151 40-202 28-206 (215)
31 4gek_A TRNA (CMO5U34)-methyltr 99.2 1E-10 3.5E-15 123.5 11.9 101 39-161 67-180 (261)
32 4df3_A Fibrillarin-like rRNA/T 99.2 1E-10 3.5E-15 122.0 11.4 99 40-159 75-182 (233)
33 1dus_A MJ0882; hypothetical pr 99.1 1.6E-10 5.5E-15 112.9 10.1 117 41-182 51-180 (194)
34 4hg2_A Methyltransferase type 99.1 9.8E-11 3.3E-15 123.6 9.1 139 10-176 8-153 (257)
35 3evz_A Methyltransferase; NYSG 99.1 3.2E-10 1.1E-14 115.4 12.4 135 39-186 52-207 (230)
36 2yxl_A PH0851 protein, 450AA l 99.1 1E-10 3.4E-15 132.8 9.2 127 40-175 257-408 (450)
37 1nt2_A Fibrillarin-like PRE-rR 99.1 1.7E-10 5.9E-15 117.7 9.3 98 40-159 55-161 (210)
38 2b9e_A NOL1/NOP2/SUN domain fa 99.1 1.3E-10 4.4E-15 126.0 8.5 127 40-175 100-253 (309)
39 3e05_A Precorrin-6Y C5,15-meth 99.1 2.5E-10 8.5E-15 114.4 9.8 116 40-182 38-165 (204)
40 2ipx_A RRNA 2'-O-methyltransfe 99.1 1.9E-10 6.4E-15 118.0 8.8 119 21-161 57-184 (233)
41 3a27_A TYW2, uncharacterized p 99.1 7.7E-11 2.6E-15 124.9 6.0 137 38-202 115-268 (272)
42 1sqg_A SUN protein, FMU protei 99.1 9E-10 3.1E-14 124.1 14.8 124 41-175 245-393 (429)
43 3cgg_A SAM-dependent methyltra 99.0 1.9E-09 6.4E-14 105.4 13.8 127 40-188 44-179 (195)
44 3pfg_A N-methyltransferase; N, 99.0 9.8E-10 3.4E-14 114.2 12.5 95 41-158 49-150 (263)
45 3g5l_A Putative S-adenosylmeth 99.0 6.2E-10 2.1E-14 114.9 10.8 95 42-160 44-146 (253)
46 3opn_A Putative hemolysin; str 99.0 6.5E-10 2.2E-14 115.5 10.7 116 20-159 15-137 (232)
47 1jsx_A Glucose-inhibited divis 99.0 3.2E-10 1.1E-14 113.4 7.9 128 42-199 65-203 (207)
48 3h2b_A SAM-dependent methyltra 99.0 8.2E-10 2.8E-14 110.0 10.5 135 43-204 42-198 (203)
49 4fzv_A Putative methyltransfer 99.0 4.7E-10 1.6E-14 124.0 9.4 125 40-175 146-303 (359)
50 1yzh_A TRNA (guanine-N(7)-)-me 99.0 7.5E-10 2.6E-14 112.0 10.2 128 41-182 40-180 (214)
51 3q87_B N6 adenine specific DNA 99.0 8.2E-10 2.8E-14 108.5 10.2 137 41-203 22-164 (170)
52 3hm2_A Precorrin-6Y C5,15-meth 99.0 1.1E-09 3.8E-14 106.3 10.6 110 40-176 23-144 (178)
53 3ujc_A Phosphoethanolamine N-m 99.0 3.3E-09 1.1E-13 109.4 14.7 100 40-161 53-161 (266)
54 3ofk_A Nodulation protein S; N 99.0 1.8E-09 6.2E-14 108.6 12.4 121 40-183 49-187 (216)
55 3e8s_A Putative SAM dependent 99.0 1.9E-09 6.5E-14 108.2 12.5 137 41-199 51-225 (227)
56 3dh0_A SAM dependent methyltra 99.0 5.8E-10 2E-14 112.3 8.6 121 40-182 35-179 (219)
57 3njr_A Precorrin-6Y methylase; 99.0 1.3E-09 4.3E-14 110.5 11.0 106 40-175 53-170 (204)
58 3dtn_A Putative methyltransfer 99.0 2.7E-09 9.1E-14 108.7 13.5 103 40-164 42-153 (234)
59 3u81_A Catechol O-methyltransf 99.0 8.3E-10 2.8E-14 112.4 9.3 117 41-175 57-186 (221)
60 1xdz_A Methyltransferase GIDB; 99.0 1.1E-09 3.7E-14 113.1 10.0 94 41-158 69-173 (240)
61 3dli_A Methyltransferase; PSI- 99.0 9.1E-10 3.1E-14 113.1 8.8 110 36-166 35-147 (240)
62 3sso_A Methyltransferase; macr 99.0 1.7E-09 5.7E-14 120.8 11.5 102 41-159 215-324 (419)
63 2frn_A Hypothetical protein PH 99.0 5.9E-10 2E-14 118.4 7.5 113 40-181 123-253 (278)
64 2fca_A TRNA (guanine-N(7)-)-me 99.0 1.3E-09 4.5E-14 111.0 9.6 105 41-159 37-153 (213)
65 3ggd_A SAM-dependent methyltra 99.0 4.6E-09 1.6E-13 107.9 13.7 108 39-164 53-168 (245)
66 3e23_A Uncharacterized protein 99.0 1E-09 3.4E-14 110.2 8.6 141 39-203 40-202 (211)
67 3ou2_A SAM-dependent methyltra 98.9 1.6E-09 5.4E-14 108.4 9.6 105 35-163 39-150 (218)
68 3mb5_A SAM-dependent methyltra 98.9 1.1E-09 3.9E-14 113.2 8.8 115 40-182 91-220 (255)
69 3grz_A L11 mtase, ribosomal pr 98.9 1.2E-09 4.2E-14 109.3 8.6 114 40-182 58-183 (205)
70 4fsd_A Arsenic methyltransfera 98.9 1E-09 3.4E-14 121.7 8.7 104 40-159 81-203 (383)
71 3sm3_A SAM-dependent methyltra 98.9 2.6E-09 8.8E-14 108.0 10.8 100 40-161 28-143 (235)
72 4dcm_A Ribosomal RNA large sub 98.9 2.1E-09 7.1E-14 119.4 10.7 119 42-182 222-354 (375)
73 2gb4_A Thiopurine S-methyltran 98.9 1.9E-09 6.6E-14 113.2 9.8 95 41-157 67-189 (252)
74 2bm8_A Cephalosporin hydroxyla 98.9 7.3E-09 2.5E-13 107.5 13.9 97 42-159 81-187 (236)
75 1g8a_A Fibrillarin-like PRE-rR 98.9 1E-09 3.5E-14 111.7 7.3 98 40-158 71-177 (227)
76 3adn_A Spermidine synthase; am 98.9 5.8E-09 2E-13 112.2 13.4 142 41-200 82-244 (294)
77 3ccf_A Cyclopropane-fatty-acyl 98.9 1.1E-09 3.8E-14 115.1 7.6 108 40-173 55-168 (279)
78 1y8c_A S-adenosylmethionine-de 98.9 6.1E-09 2.1E-13 105.9 12.8 97 41-160 36-143 (246)
79 3p9n_A Possible methyltransfer 98.9 2.4E-09 8.2E-14 106.1 9.5 100 41-161 43-155 (189)
80 1l3i_A Precorrin-6Y methyltran 98.9 1.2E-09 4.3E-14 106.4 7.2 115 40-183 31-158 (192)
81 1pjz_A Thiopurine S-methyltran 98.9 1.9E-09 6.5E-14 108.9 8.7 96 40-157 20-138 (203)
82 3dxy_A TRNA (guanine-N(7)-)-me 98.9 7.6E-10 2.6E-14 113.6 5.9 106 41-159 33-150 (218)
83 3duw_A OMT, O-methyltransferas 98.9 2.3E-09 8E-14 108.6 9.4 98 41-158 57-166 (223)
84 3f4k_A Putative methyltransfer 98.9 3.7E-09 1.3E-13 109.0 11.0 96 39-159 43-150 (257)
85 3hem_A Cyclopropane-fatty-acyl 98.9 4.5E-09 1.5E-13 111.9 11.9 105 40-164 70-188 (302)
86 3gu3_A Methyltransferase; alph 98.9 1.1E-09 3.8E-14 115.8 7.1 99 40-161 20-128 (284)
87 1fbn_A MJ fibrillarin homologu 98.9 3.2E-09 1.1E-13 108.9 10.2 98 40-159 72-178 (230)
88 1nkv_A Hypothetical protein YJ 98.9 4.3E-09 1.5E-13 108.4 11.1 95 40-159 34-140 (256)
89 3d2l_A SAM-dependent methyltra 98.9 7.9E-09 2.7E-13 105.3 12.9 97 40-160 31-138 (243)
90 3mgg_A Methyltransferase; NYSG 98.9 9.4E-10 3.2E-14 115.0 6.1 105 32-159 27-142 (276)
91 3g5t_A Trans-aconitate 3-methy 98.9 2.3E-09 8E-14 113.9 9.2 101 41-158 35-148 (299)
92 1nv8_A HEMK protein; class I a 98.9 3.1E-09 1.1E-13 113.5 10.1 134 42-199 123-280 (284)
93 1vl5_A Unknown conserved prote 98.9 1.5E-09 5E-14 112.7 7.0 96 41-161 36-142 (260)
94 3l8d_A Methyltransferase; stru 98.9 9.7E-09 3.3E-13 104.7 12.9 98 40-162 51-156 (242)
95 3dlc_A Putative S-adenosyl-L-m 98.9 4.6E-09 1.6E-13 104.7 10.3 94 41-159 43-148 (219)
96 3kkz_A Uncharacterized protein 98.9 2E-09 6.8E-14 112.3 7.7 97 39-160 43-151 (267)
97 2p7i_A Hypothetical protein; p 98.9 1.3E-09 4.5E-14 110.8 6.2 100 41-166 41-148 (250)
98 2yxd_A Probable cobalt-precorr 98.9 2.6E-09 8.9E-14 103.5 7.7 115 40-186 33-158 (183)
99 2p35_A Trans-aconitate 2-methy 98.9 1.6E-09 5.4E-14 111.7 6.6 113 23-163 18-136 (259)
100 3p2e_A 16S rRNA methylase; met 98.9 2.7E-09 9.1E-14 110.1 8.0 100 41-157 23-137 (225)
101 3hnr_A Probable methyltransfer 98.9 4E-09 1.4E-13 106.2 9.0 97 41-161 44-147 (220)
102 3ege_A Putative methyltransfer 98.9 2.5E-09 8.4E-14 111.7 7.7 96 40-161 32-132 (261)
103 3fpf_A Mtnas, putative unchara 98.9 1E-08 3.4E-13 110.5 12.6 92 40-159 120-222 (298)
104 3lcc_A Putative methyl chlorid 98.9 4.9E-09 1.7E-13 107.1 9.7 136 43-203 67-228 (235)
105 3r3h_A O-methyltransferase, SA 98.9 4.9E-09 1.7E-13 109.2 9.9 99 41-158 59-169 (242)
106 2zfu_A Nucleomethylin, cerebra 98.9 8.6E-09 2.9E-13 103.7 11.3 108 41-181 66-176 (215)
107 3ocj_A Putative exported prote 98.9 5.5E-09 1.9E-13 111.6 10.5 101 40-160 116-228 (305)
108 3uwp_A Histone-lysine N-methyl 98.9 5.8E-09 2E-13 116.8 11.0 96 40-157 171-286 (438)
109 3gjy_A Spermidine synthase; AP 98.9 1.3E-08 4.5E-13 110.6 13.5 123 44-183 91-227 (317)
110 3g89_A Ribosomal RNA small sub 98.9 4.8E-09 1.6E-13 109.9 9.5 93 41-157 79-182 (249)
111 2ih2_A Modification methylase 98.9 2.9E-08 9.8E-13 110.3 16.2 122 41-174 38-183 (421)
112 2pxx_A Uncharacterized protein 98.8 4E-09 1.4E-13 105.1 8.2 110 40-163 40-163 (215)
113 2ex4_A Adrenal gland protein A 98.8 5.7E-09 2E-13 107.2 9.6 120 41-182 78-223 (241)
114 3dmg_A Probable ribosomal RNA 98.8 6E-09 2E-13 116.1 10.1 118 42-182 233-360 (381)
115 1xxl_A YCGJ protein; structura 98.8 3E-09 1E-13 109.4 7.2 98 40-162 19-127 (239)
116 3tma_A Methyltransferase; thum 98.8 1.2E-08 4.3E-13 111.6 12.4 107 40-160 201-318 (354)
117 4htf_A S-adenosylmethionine-de 98.8 7.2E-09 2.5E-13 109.1 9.8 97 41-161 67-175 (285)
118 1xtp_A LMAJ004091AAA; SGPP, st 98.8 2.8E-08 9.5E-13 102.1 14.0 120 41-182 92-236 (254)
119 2nxc_A L11 mtase, ribosomal pr 98.8 1.7E-08 5.7E-13 105.7 12.4 113 40-182 118-242 (254)
120 1wzn_A SAM-dependent methyltra 98.8 8.4E-09 2.9E-13 106.1 10.0 96 41-159 40-145 (252)
121 3g07_A 7SK snRNA methylphospha 98.8 1.7E-08 5.8E-13 107.6 12.6 105 42-158 46-219 (292)
122 3mq2_A 16S rRNA methyltransfer 98.8 3.7E-09 1.3E-13 106.8 7.1 101 40-159 25-140 (218)
123 3jwh_A HEN1; methyltransferase 98.8 1.6E-08 5.6E-13 102.0 11.9 99 41-160 28-142 (217)
124 3ckk_A TRNA (guanine-N(7)-)-me 98.8 3.7E-09 1.3E-13 109.8 7.2 107 40-159 44-168 (235)
125 3dr5_A Putative O-methyltransf 98.8 3.6E-09 1.2E-13 108.8 7.1 92 43-157 57-161 (221)
126 3bxo_A N,N-dimethyltransferase 98.8 7.3E-09 2.5E-13 105.3 9.1 98 41-160 39-142 (239)
127 2a14_A Indolethylamine N-methy 98.8 2.9E-09 9.8E-14 111.7 6.1 127 41-184 54-238 (263)
128 3tr6_A O-methyltransferase; ce 98.8 5.7E-09 2E-13 105.7 7.9 99 41-158 63-173 (225)
129 2pwy_A TRNA (adenine-N(1)-)-me 98.8 5.3E-09 1.8E-13 107.9 7.8 114 40-180 94-220 (258)
130 3vc1_A Geranyl diphosphate 2-C 98.8 7.2E-09 2.5E-13 111.1 9.0 96 40-160 115-222 (312)
131 3orh_A Guanidinoacetate N-meth 98.8 2.6E-09 8.7E-14 110.6 5.1 100 41-157 59-168 (236)
132 1ri5_A MRNA capping enzyme; me 98.8 8.2E-09 2.8E-13 108.4 8.9 103 40-161 62-176 (298)
133 3tfw_A Putative O-methyltransf 98.8 8E-09 2.7E-13 107.6 8.7 96 41-158 62-169 (248)
134 2xvm_A Tellurite resistance pr 98.8 1E-08 3.4E-13 101.1 8.9 94 42-159 32-136 (199)
135 1kpg_A CFA synthase;, cyclopro 98.8 2.7E-08 9.2E-13 104.7 12.7 100 40-164 62-173 (287)
136 2b25_A Hypothetical protein; s 98.8 1.6E-08 5.4E-13 109.8 11.2 110 40-174 103-234 (336)
137 1ve3_A Hypothetical protein PH 98.8 7.5E-09 2.6E-13 104.3 8.0 99 39-160 35-143 (227)
138 2fk8_A Methoxy mycolic acid sy 98.8 5.8E-08 2E-12 103.9 15.0 100 40-164 88-199 (318)
139 3jwg_A HEN1, methyltransferase 98.8 8.5E-08 2.9E-12 96.7 15.4 99 41-160 28-142 (219)
140 3bus_A REBM, methyltransferase 98.8 1.5E-08 5.2E-13 105.5 10.1 97 40-160 59-167 (273)
141 2igt_A SAM dependent methyltra 98.8 1.4E-08 4.7E-13 111.0 10.1 125 41-176 152-291 (332)
142 3bwc_A Spermidine synthase; SA 98.8 1.9E-08 6.3E-13 108.4 11.0 142 41-200 94-257 (304)
143 4dmg_A Putative uncharacterize 98.8 2.4E-08 8.2E-13 111.7 12.1 121 40-176 212-344 (393)
144 2yqz_A Hypothetical protein TT 98.8 8.7E-09 3E-13 106.2 8.0 95 39-158 36-140 (263)
145 1yb2_A Hypothetical protein TA 98.8 4.4E-09 1.5E-13 111.0 5.6 114 40-181 108-234 (275)
146 2yx1_A Hypothetical protein MJ 98.8 4.8E-09 1.6E-13 114.6 6.1 102 40-175 193-306 (336)
147 3m33_A Uncharacterized protein 98.8 4.8E-09 1.6E-13 107.1 5.5 112 40-181 46-164 (226)
148 1i9g_A Hypothetical protein RV 98.8 6.8E-09 2.3E-13 108.9 6.8 117 40-183 97-229 (280)
149 3g2m_A PCZA361.24; SAM-depende 98.8 1.2E-08 4E-13 108.5 8.7 98 42-162 82-193 (299)
150 2o57_A Putative sarcosine dime 98.8 5.6E-09 1.9E-13 110.5 6.1 97 40-160 80-188 (297)
151 1i1n_A Protein-L-isoaspartate 98.7 3E-09 1E-13 108.1 3.5 94 40-161 75-184 (226)
152 2pjd_A Ribosomal RNA small sub 98.7 1E-08 3.5E-13 112.0 7.8 118 42-182 196-323 (343)
153 1zx0_A Guanidinoacetate N-meth 98.7 3.8E-09 1.3E-13 108.4 4.1 102 40-158 58-169 (236)
154 3i9f_A Putative type 11 methyl 98.7 2.6E-08 9E-13 96.3 9.8 114 40-182 15-146 (170)
155 3lbf_A Protein-L-isoaspartate 98.7 1.3E-08 4.3E-13 102.1 7.8 91 40-161 75-176 (210)
156 3ntv_A MW1564 protein; rossman 98.7 1.2E-08 4.2E-13 104.9 7.8 93 41-157 70-174 (232)
157 1inl_A Spermidine synthase; be 98.7 2.5E-08 8.5E-13 107.1 10.4 142 41-200 89-251 (296)
158 3m70_A Tellurite resistance pr 98.7 2.6E-08 9E-13 104.8 10.3 93 42-159 120-223 (286)
159 1o54_A SAM-dependent O-methylt 98.7 1.1E-08 3.6E-13 107.9 6.9 116 40-183 110-238 (277)
160 1o9g_A RRNA methyltransferase; 98.7 1.5E-08 5E-13 105.1 7.7 112 42-162 51-216 (250)
161 2p8j_A S-adenosylmethionine-de 98.7 8.6E-09 2.9E-13 102.8 5.7 102 40-163 21-132 (209)
162 1uir_A Polyamine aminopropyltr 98.7 2.1E-08 7.3E-13 108.5 9.0 143 41-200 76-241 (314)
163 3bkw_A MLL3908 protein, S-aden 98.7 9.2E-09 3.1E-13 104.8 5.8 97 41-161 42-146 (243)
164 2vdw_A Vaccinia virus capping 98.7 1.2E-08 4.3E-13 109.8 7.1 107 41-160 47-170 (302)
165 2gs9_A Hypothetical protein TT 98.7 9.5E-09 3.3E-13 102.9 5.7 97 41-164 35-137 (211)
166 1iy9_A Spermidine synthase; ro 98.7 5.5E-08 1.9E-12 103.4 11.8 141 42-200 75-235 (275)
167 2avd_A Catechol-O-methyltransf 98.7 1.6E-08 5.3E-13 102.8 7.2 99 41-158 68-178 (229)
168 3thr_A Glycine N-methyltransfe 98.7 6.5E-09 2.2E-13 109.6 4.5 106 41-160 56-176 (293)
169 2kw5_A SLR1183 protein; struct 98.7 1.7E-08 5.8E-13 100.4 7.3 98 40-163 28-135 (202)
170 2pbf_A Protein-L-isoaspartate 98.7 1.8E-08 6.3E-13 102.3 7.6 99 39-161 77-195 (227)
171 2ift_A Putative methylase HI07 98.7 9E-09 3.1E-13 103.7 5.2 96 42-160 53-164 (201)
172 1mjf_A Spermidine synthase; sp 98.7 4.5E-08 1.5E-12 104.2 10.8 139 41-200 74-238 (281)
173 1wxx_A TT1595, hypothetical pr 98.7 3.6E-08 1.2E-12 109.4 10.4 109 42-162 209-328 (382)
174 2b78_A Hypothetical protein SM 98.7 5.2E-08 1.8E-12 108.4 11.7 123 41-175 211-348 (385)
175 2esr_A Methyltransferase; stru 98.7 2.3E-08 7.8E-13 97.5 7.7 99 41-163 30-142 (177)
176 1p91_A Ribosomal RNA large sub 98.7 3E-08 1E-12 103.3 9.0 94 41-164 84-183 (269)
177 2qe6_A Uncharacterized protein 98.7 6.4E-08 2.2E-12 102.7 11.5 109 42-163 77-200 (274)
178 1sui_A Caffeoyl-COA O-methyltr 98.7 4E-08 1.4E-12 102.6 9.7 98 41-158 78-189 (247)
179 3iv6_A Putative Zn-dependent a 98.7 6E-08 2.1E-12 102.7 11.0 104 40-163 43-152 (261)
180 3k6r_A Putative transferase PH 98.7 1.9E-08 6.6E-13 107.5 7.2 92 40-160 123-226 (278)
181 2i7c_A Spermidine synthase; tr 98.7 2.4E-08 8.4E-13 106.4 8.1 141 41-199 77-237 (283)
182 2fhp_A Methylase, putative; al 98.7 2E-08 6.9E-13 98.1 6.8 104 41-163 43-158 (187)
183 1ws6_A Methyltransferase; stru 98.7 2.9E-08 9.8E-13 95.4 7.8 102 41-164 40-152 (171)
184 3bkx_A SAM-dependent methyltra 98.7 5.2E-08 1.8E-12 101.5 10.3 103 40-162 41-162 (275)
185 2as0_A Hypothetical protein PH 98.7 5.9E-08 2E-12 108.0 11.4 122 41-173 216-350 (396)
186 3bgv_A MRNA CAP guanine-N7 met 98.7 2.3E-08 7.9E-13 107.1 7.7 108 41-162 33-158 (313)
187 2pt6_A Spermidine synthase; tr 98.7 9.5E-08 3.3E-12 103.9 12.6 142 41-200 115-276 (321)
188 2vdv_E TRNA (guanine-N(7)-)-me 98.7 1.4E-08 4.7E-13 105.3 5.5 106 41-159 48-173 (246)
189 1dl5_A Protein-L-isoaspartate 98.7 2.1E-08 7.1E-13 108.3 7.0 92 40-159 73-175 (317)
190 3cc8_A Putative methyltransfer 98.7 1.6E-08 5.4E-13 101.6 5.6 104 41-167 31-138 (230)
191 2yxe_A Protein-L-isoaspartate 98.7 3.1E-08 1.1E-12 99.6 7.6 92 40-159 75-177 (215)
192 2yvl_A TRMI protein, hypotheti 98.7 2.7E-08 9.2E-13 101.9 7.3 112 40-181 89-212 (248)
193 2i62_A Nicotinamide N-methyltr 98.6 6.2E-08 2.1E-12 99.9 9.9 126 41-182 55-237 (265)
194 2g72_A Phenylethanolamine N-me 98.6 5.3E-08 1.8E-12 102.9 8.7 123 42-181 71-253 (289)
195 2h00_A Methyltransferase 10 do 98.6 2E-07 6.9E-12 96.4 12.9 136 42-183 65-237 (254)
196 3v97_A Ribosomal RNA large sub 98.6 3.9E-08 1.3E-12 117.6 8.4 107 42-160 539-658 (703)
197 2f8l_A Hypothetical protein LM 98.6 6.4E-08 2.2E-12 105.6 9.5 117 41-173 129-274 (344)
198 2o07_A Spermidine synthase; st 98.6 7.2E-08 2.5E-12 104.1 9.7 142 41-200 94-255 (304)
199 3c3y_A Pfomt, O-methyltransfer 98.6 5.1E-08 1.7E-12 100.9 7.7 98 41-158 69-180 (237)
200 3q7e_A Protein arginine N-meth 98.6 2.2E-08 7.4E-13 109.9 5.0 96 41-157 65-171 (349)
201 3gdh_A Trimethylguanosine synt 98.6 5E-09 1.7E-13 107.5 -0.1 90 42-157 78-179 (241)
202 2fpo_A Methylase YHHF; structu 98.6 5.7E-08 1.9E-12 97.9 7.5 96 42-161 54-162 (202)
203 2gpy_A O-methyltransferase; st 98.6 3.7E-08 1.3E-12 100.7 6.1 95 41-158 53-159 (233)
204 1fp1_D Isoliquiritigenin 2'-O- 98.6 2.5E-07 8.5E-12 101.8 13.1 104 31-158 198-305 (372)
205 3c3p_A Methyltransferase; NP_9 98.6 3.7E-08 1.3E-12 99.1 5.9 92 42-158 56-159 (210)
206 3r0q_C Probable protein argini 98.6 8.9E-08 3E-12 106.1 9.4 96 40-157 61-167 (376)
207 1wy7_A Hypothetical protein PH 98.6 1.4E-07 4.7E-12 94.3 9.9 106 41-174 48-164 (207)
208 2fyt_A Protein arginine N-meth 98.6 4.9E-08 1.7E-12 106.8 7.0 96 40-156 62-168 (340)
209 2avn_A Ubiquinone/menaquinone 98.6 5.8E-08 2E-12 101.0 7.2 96 41-161 53-154 (260)
210 2hnk_A SAM-dependent O-methylt 98.6 5.2E-08 1.8E-12 100.3 6.3 103 41-159 59-181 (239)
211 1xj5_A Spermidine synthase 1; 98.6 2.2E-07 7.6E-12 101.7 11.6 121 41-178 119-258 (334)
212 2aot_A HMT, histamine N-methyl 98.6 1.1E-07 3.7E-12 100.9 8.8 106 40-162 50-175 (292)
213 2b2c_A Spermidine synthase; be 98.6 8.5E-08 2.9E-12 104.1 8.1 141 41-200 107-268 (314)
214 3kr9_A SAM-dependent methyltra 98.5 2.1E-07 7.1E-12 96.6 10.4 115 38-179 11-138 (225)
215 3cbg_A O-methyltransferase; cy 98.5 6E-08 2E-12 99.8 6.3 98 41-158 71-181 (232)
216 3c0k_A UPF0064 protein YCCW; P 98.5 1.1E-07 3.7E-12 106.0 8.5 110 41-161 219-341 (396)
217 2cmg_A Spermidine synthase; tr 98.5 3E-07 1E-11 97.2 11.4 125 41-200 71-215 (262)
218 2r3s_A Uncharacterized protein 98.5 3.7E-07 1.3E-11 98.1 12.3 107 32-160 154-272 (335)
219 1vbf_A 231AA long hypothetical 98.5 1.6E-07 5.3E-12 95.5 8.8 90 40-160 68-166 (231)
220 1r18_A Protein-L-isoaspartate( 98.5 5.1E-08 1.7E-12 99.4 5.1 94 40-161 82-196 (227)
221 4hc4_A Protein arginine N-meth 98.5 1.1E-07 3.8E-12 105.7 7.4 93 42-156 83-186 (376)
222 2y1w_A Histone-arginine methyl 98.5 1.3E-07 4.5E-12 103.6 7.8 95 41-158 49-154 (348)
223 1ne2_A Hypothetical protein TA 98.5 3.4E-07 1.2E-11 91.2 10.1 105 41-174 50-160 (200)
224 1vlm_A SAM-dependent methyltra 98.5 9.3E-08 3.2E-12 96.8 5.6 92 42-162 47-142 (219)
225 3mcz_A O-methyltransferase; ad 98.5 3E-07 1E-11 99.9 9.8 108 32-159 169-287 (352)
226 3reo_A (ISO)eugenol O-methyltr 98.5 1.2E-06 4E-11 96.6 14.6 104 33-160 194-301 (368)
227 1u2z_A Histone-lysine N-methyl 98.5 3.9E-07 1.3E-11 103.1 10.6 98 40-158 240-358 (433)
228 1jg1_A PIMT;, protein-L-isoasp 98.5 1.3E-07 4.5E-12 97.0 6.0 92 40-161 89-191 (235)
229 1g6q_1 HnRNP arginine N-methyl 98.4 2.3E-07 7.8E-12 100.8 7.9 95 41-156 37-142 (328)
230 3lec_A NADB-rossmann superfami 98.4 4.5E-07 1.5E-11 94.4 9.6 117 37-180 16-145 (230)
231 3gnl_A Uncharacterized protein 98.4 3.9E-07 1.3E-11 95.6 9.0 115 37-178 16-143 (244)
232 1qzz_A RDMB, aclacinomycin-10- 98.4 1.3E-06 4.5E-11 95.5 13.5 97 40-160 180-288 (374)
233 3axs_A Probable N(2),N(2)-dime 98.4 2.6E-08 8.8E-13 111.4 -0.3 153 41-221 51-219 (392)
234 3giw_A Protein of unknown func 98.4 4.6E-07 1.6E-11 96.7 9.3 107 43-163 79-204 (277)
235 1fp2_A Isoflavone O-methyltran 98.4 7.9E-07 2.7E-11 97.0 11.3 96 40-160 186-289 (352)
236 2qm3_A Predicted methyltransfe 98.4 9.7E-07 3.3E-11 97.5 12.0 97 41-161 171-280 (373)
237 3lst_A CALO1 methyltransferase 98.4 4.8E-07 1.6E-11 98.7 9.3 103 33-160 176-287 (348)
238 3p9c_A Caffeic acid O-methyltr 98.4 1.8E-06 6.3E-11 95.0 14.0 103 33-159 192-298 (364)
239 1x19_A CRTF-related protein; m 98.4 1.4E-06 4.9E-11 95.1 12.8 101 35-160 184-296 (359)
240 3htx_A HEN1; HEN1, small RNA m 98.4 4E-07 1.4E-11 109.1 7.9 97 42-159 721-834 (950)
241 2ip2_A Probable phenazine-spec 98.4 2.2E-06 7.4E-11 92.4 13.1 101 34-160 161-273 (334)
242 3dp7_A SAM-dependent methyltra 98.4 6.6E-07 2.3E-11 98.3 9.0 99 41-159 178-287 (363)
243 4e2x_A TCAB9; kijanose, tetron 98.4 2.9E-07 9.8E-12 102.5 6.2 100 40-159 105-208 (416)
244 3b3j_A Histone-arginine methyl 98.3 3.3E-07 1.1E-11 105.0 6.5 94 41-157 157-261 (480)
245 3bzb_A Uncharacterized protein 98.3 3.5E-06 1.2E-10 89.3 14.0 113 27-157 64-203 (281)
246 3i53_A O-methyltransferase; CO 98.3 1.5E-06 5.1E-11 93.8 11.1 103 33-160 161-275 (332)
247 3tm4_A TRNA (guanine N2-)-meth 98.3 5.4E-07 1.9E-11 99.7 7.5 101 40-157 215-327 (373)
248 2qfm_A Spermine synthase; sper 98.3 2.8E-06 9.6E-11 93.8 12.3 129 41-181 187-339 (364)
249 1tw3_A COMT, carminomycin 4-O- 98.3 1.8E-06 6.2E-11 94.0 10.8 98 40-161 181-290 (360)
250 2okc_A Type I restriction enzy 98.3 5.4E-07 1.9E-11 101.9 6.1 105 41-159 170-307 (445)
251 1zg3_A Isoflavanone 4'-O-methy 98.3 2.5E-06 8.6E-11 93.2 10.5 97 40-160 191-294 (358)
252 1yub_A Ermam, rRNA methyltrans 98.2 4.2E-08 1.4E-12 101.9 -3.5 104 40-157 27-143 (245)
253 1af7_A Chemotaxis receptor met 98.2 2.8E-06 9.7E-11 90.5 10.5 97 42-157 105-250 (274)
254 1zq9_A Probable dimethyladenos 98.2 1.1E-06 3.6E-11 93.8 7.0 67 40-122 26-104 (285)
255 3gwz_A MMCR; methyltransferase 98.2 3.2E-06 1.1E-10 93.1 10.9 102 33-159 194-307 (369)
256 3fzg_A 16S rRNA methylase; met 98.2 2.8E-07 9.5E-12 93.5 1.5 92 40-157 47-150 (200)
257 2dul_A N(2),N(2)-dimethylguano 98.2 1.7E-06 5.8E-11 96.2 7.0 91 42-158 47-163 (378)
258 3bt7_A TRNA (uracil-5-)-methyl 98.1 1.9E-06 6.5E-11 95.1 6.3 94 43-162 214-329 (369)
259 4a6d_A Hydroxyindole O-methylt 98.1 6.2E-06 2.1E-10 90.4 10.3 102 34-159 172-283 (353)
260 2ar0_A M.ecoki, type I restric 98.1 1.1E-05 3.8E-10 93.6 12.8 107 41-159 168-312 (541)
261 2h1r_A Dimethyladenosine trans 98.1 3E-06 1E-10 91.0 6.2 66 40-121 40-116 (299)
262 1qam_A ERMC' methyltransferase 98.1 5.5E-07 1.9E-11 93.9 0.4 52 40-94 28-88 (244)
263 1uwv_A 23S rRNA (uracil-5-)-me 98.0 1.5E-05 5.2E-10 89.9 11.0 71 40-120 284-365 (433)
264 3s1s_A Restriction endonucleas 98.0 2.9E-05 9.9E-10 93.1 13.1 109 41-159 320-465 (878)
265 3lkd_A Type I restriction-modi 98.0 2E-05 6.9E-10 91.5 11.3 109 41-159 220-358 (542)
266 4azs_A Methyltransferase WBDD; 98.0 6.2E-06 2.1E-10 96.2 6.4 101 40-161 64-175 (569)
267 1m6y_A S-adenosyl-methyltransf 98.0 9.4E-06 3.2E-10 87.6 7.3 74 40-120 24-107 (301)
268 2jjq_A Uncharacterized RNA met 97.9 2.2E-05 7.5E-10 88.6 10.4 88 40-158 288-386 (425)
269 3ll7_A Putative methyltransfer 97.9 1.5E-05 5.2E-10 89.5 7.1 114 40-171 91-221 (410)
270 3gru_A Dimethyladenosine trans 97.8 1.6E-05 5.5E-10 85.5 6.5 68 40-121 48-124 (295)
271 3khk_A Type I restriction-modi 97.7 2.2E-05 7.7E-10 91.2 6.3 104 45-159 247-395 (544)
272 3ldu_A Putative methylase; str 97.7 8.3E-05 2.8E-09 82.8 10.0 69 41-121 194-311 (385)
273 3k0b_A Predicted N6-adenine-sp 97.7 9.8E-05 3.4E-09 82.4 9.7 69 41-121 200-317 (393)
274 3tka_A Ribosomal RNA small sub 97.7 0.00018 6E-09 78.6 11.2 74 40-119 55-136 (347)
275 3ldg_A Putative uncharacterize 97.6 0.00011 3.7E-09 81.9 9.0 69 41-121 193-310 (384)
276 3fut_A Dimethyladenosine trans 97.5 8.8E-05 3E-09 78.8 6.3 70 40-123 45-122 (271)
277 3o4f_A Spermidine synthase; am 97.5 0.00041 1.4E-08 74.6 11.3 143 41-201 82-245 (294)
278 2ld4_A Anamorsin; methyltransf 97.5 2.5E-05 8.5E-10 76.0 1.6 83 40-158 10-100 (176)
279 2qy6_A UPF0209 protein YFCK; s 97.5 0.00011 3.8E-09 77.5 6.6 114 41-177 59-228 (257)
280 3ufb_A Type I restriction-modi 97.5 0.0005 1.7E-08 79.6 12.1 110 41-159 216-362 (530)
281 2oyr_A UPF0341 protein YHIQ; a 97.4 5.6E-05 1.9E-09 79.9 3.7 68 41-121 85-174 (258)
282 2r6z_A UPF0341 protein in RSP 97.4 4E-05 1.4E-09 80.8 2.4 71 41-121 82-171 (258)
283 3lcv_B Sisomicin-gentamicin re 97.4 8.8E-05 3E-09 78.6 4.9 106 29-157 115-234 (281)
284 3frh_A 16S rRNA methylase; met 97.4 0.00014 4.9E-09 76.2 6.0 91 41-157 104-204 (253)
285 2k4m_A TR8_protein, UPF0146 pr 97.4 0.00099 3.4E-08 64.6 10.8 91 41-164 34-126 (153)
286 3trk_A Nonstructural polyprote 97.3 0.00071 2.4E-08 70.8 10.1 95 110-205 210-306 (324)
287 3tqs_A Ribosomal RNA small sub 97.3 0.00016 5.3E-09 76.2 5.3 70 40-120 27-105 (255)
288 4gqb_A Protein arginine N-meth 97.3 9.4E-05 3.2E-09 87.2 3.6 93 43-156 358-464 (637)
289 3cvo_A Methyltransferase-like 97.3 0.0011 3.7E-08 67.6 10.4 109 41-169 29-165 (202)
290 3c6k_A Spermine synthase; sper 97.2 0.0006 2.1E-08 75.6 9.1 130 42-182 205-357 (381)
291 3v97_A Ribosomal RNA large sub 97.2 0.00026 8.8E-09 84.7 6.1 104 41-157 189-345 (703)
292 3b5i_A S-adenosyl-L-methionine 97.2 0.00093 3.2E-08 74.2 10.1 112 42-161 52-227 (374)
293 3ftd_A Dimethyladenosine trans 97.1 0.00048 1.7E-08 72.0 6.5 71 40-122 29-106 (249)
294 1wg8_A Predicted S-adenosylmet 97.1 0.00094 3.2E-08 71.3 8.3 71 40-119 20-97 (285)
295 3ua3_A Protein arginine N-meth 97.1 0.00018 6.2E-09 85.1 3.0 99 43-156 410-531 (745)
296 3uzu_A Ribosomal RNA small sub 97.1 0.00032 1.1E-08 74.8 4.7 56 40-95 40-103 (279)
297 4gua_A Non-structural polyprot 97.1 0.0022 7.7E-08 73.2 11.3 95 110-205 220-316 (670)
298 1qyr_A KSGA, high level kasuga 97.0 0.00062 2.1E-08 71.4 6.2 75 40-123 19-102 (252)
299 2efj_A 3,7-dimethylxanthine me 96.8 0.0023 7.8E-08 71.2 9.0 21 43-63 53-73 (384)
300 2wk1_A NOVP; transferase, O-me 96.4 0.0057 1.9E-07 65.4 7.9 94 43-158 107-243 (282)
301 1m6e_X S-adenosyl-L-methionnin 96.0 0.0066 2.3E-07 67.0 6.4 112 41-160 50-210 (359)
302 3g7u_A Cytosine-specific methy 95.6 0.029 9.8E-07 62.2 9.2 106 44-157 3-117 (376)
303 3vyw_A MNMC2; tRNA wobble urid 95.4 0.033 1.1E-06 60.1 8.6 118 43-183 97-246 (308)
304 1g55_A DNA cytosine methyltran 93.9 0.041 1.4E-06 60.0 4.7 71 44-122 3-79 (343)
305 2zig_A TTHA0409, putative modi 93.2 0.053 1.8E-06 57.7 4.1 34 41-77 234-267 (297)
306 3tos_A CALS11; methyltransfera 93.0 0.59 2E-05 49.2 11.6 117 43-177 70-235 (257)
307 4e4y_A Short chain dehydrogena 92.7 0.76 2.6E-05 46.6 11.7 111 43-157 4-124 (244)
308 2oo3_A Protein involved in cat 92.3 0.11 3.7E-06 55.4 5.0 96 43-157 92-196 (283)
309 4h0n_A DNMT2; SAH binding, tra 91.8 0.15 5E-06 55.6 5.3 71 44-122 4-80 (333)
310 3qv2_A 5-cytosine DNA methyltr 91.7 0.24 8.2E-06 53.8 6.9 70 43-122 10-87 (327)
311 1dhr_A Dihydropteridine reduct 91.6 1.2 4.2E-05 44.9 11.8 115 42-157 6-131 (241)
312 2zig_A TTHA0409, putative modi 91.4 0.22 7.5E-06 52.9 6.2 68 83-159 21-97 (297)
313 3iyl_W VP1; non-enveloped viru 90.8 0.62 2.1E-05 57.4 9.7 90 110-203 573-664 (1299)
314 2qrv_A DNA (cytosine-5)-methyl 90.6 0.22 7.6E-06 53.3 5.2 107 42-158 15-139 (295)
315 1i4w_A Mitochondrial replicati 90.6 0.31 1.1E-05 53.5 6.5 53 42-95 58-118 (353)
316 3ubt_Y Modification methylase 90.5 0.4 1.4E-05 51.2 7.1 97 44-157 1-108 (331)
317 3vtz_A Glucose 1-dehydrogenase 90.5 2 6.7E-05 44.5 12.2 80 41-122 12-92 (269)
318 3ijr_A Oxidoreductase, short c 90.2 2.8 9.6E-05 43.8 13.3 114 42-157 46-180 (291)
319 2c7p_A Modification methylase 90.2 0.17 5.7E-06 54.9 3.9 98 43-157 11-118 (327)
320 3mag_A VP39; methylated adenin 90.1 2.9 0.0001 44.6 13.1 150 42-204 60-218 (307)
321 3d7l_A LIN1944 protein; APC893 90.1 1.4 4.9E-05 42.8 10.3 65 44-121 4-68 (202)
322 3pxx_A Carveol dehydrogenase; 89.9 3.2 0.00011 42.7 13.3 114 42-157 9-151 (287)
323 2fwm_X 2,3-dihydro-2,3-dihydro 89.9 3.2 0.00011 42.1 13.1 78 42-121 6-84 (250)
324 1boo_A Protein (N-4 cytosine-s 89.9 0.38 1.3E-05 51.8 6.3 69 83-160 14-85 (323)
325 3oig_A Enoyl-[acyl-carrier-pro 89.9 2.9 0.0001 42.6 12.9 115 42-157 6-145 (266)
326 1uay_A Type II 3-hydroxyacyl-C 89.8 2.2 7.6E-05 42.4 11.6 74 43-121 2-76 (242)
327 2dtx_A Glucose 1-dehydrogenase 89.7 3.5 0.00012 42.4 13.4 77 43-122 8-85 (264)
328 2dph_A Formaldehyde dismutase; 89.4 0.29 1E-05 53.9 5.1 106 40-157 183-297 (398)
329 1e3j_A NADP(H)-dependent ketos 89.4 0.78 2.7E-05 49.4 8.4 98 40-157 166-269 (352)
330 2h7i_A Enoyl-[acyl-carrier-pro 89.4 0.82 2.8E-05 47.2 8.2 115 42-157 6-146 (269)
331 1g60_A Adenine-specific methyl 89.4 0.25 8.4E-06 51.5 4.2 34 41-77 211-244 (260)
332 3is3_A 17BETA-hydroxysteroid d 89.3 2.6 8.8E-05 43.5 12.0 114 42-157 17-150 (270)
333 1pqw_A Polyketide synthase; ro 89.3 0.38 1.3E-05 47.1 5.3 94 40-157 36-135 (198)
334 1ooe_A Dihydropteridine reduct 89.1 1.5 5.1E-05 44.1 9.8 114 43-157 3-127 (236)
335 1f8f_A Benzyl alcohol dehydrog 89.0 0.45 1.6E-05 51.7 6.2 94 40-157 188-287 (371)
336 3v2g_A 3-oxoacyl-[acyl-carrier 89.0 3.5 0.00012 42.7 12.8 114 42-157 30-163 (271)
337 1sby_A Alcohol dehydrogenase; 88.9 2.6 8.8E-05 42.7 11.5 77 43-121 5-94 (254)
338 3dii_A Short-chain dehydrogena 88.8 1.9 6.5E-05 43.8 10.4 78 43-122 2-86 (247)
339 2gdz_A NAD+-dependent 15-hydro 88.5 1.8 6.2E-05 44.3 10.1 79 42-122 6-97 (267)
340 3jv7_A ADH-A; dehydrogenase, n 88.4 0.81 2.8E-05 49.1 7.6 94 40-157 169-268 (345)
341 3s2e_A Zinc-containing alcohol 88.2 0.71 2.4E-05 49.4 6.9 93 40-157 164-261 (340)
342 3me5_A Cytosine-specific methy 88.1 0.34 1.2E-05 55.4 4.6 77 43-122 88-180 (482)
343 3sx2_A Putative 3-ketoacyl-(ac 88.0 4.6 0.00016 41.5 12.9 79 42-122 12-113 (278)
344 3o38_A Short chain dehydrogena 88.0 4.6 0.00016 41.1 12.8 79 42-122 21-112 (266)
345 1pl8_A Human sorbitol dehydrog 87.9 0.99 3.4E-05 48.7 7.9 95 40-157 169-271 (356)
346 1g60_A Adenine-specific methyl 87.8 0.59 2E-05 48.5 5.9 65 84-159 5-74 (260)
347 3iht_A S-adenosyl-L-methionine 87.8 1.8 6.2E-05 42.3 8.6 100 44-157 42-145 (174)
348 3ksu_A 3-oxoacyl-acyl carrier 87.7 4.9 0.00017 41.3 12.7 114 42-157 10-145 (262)
349 4eso_A Putative oxidoreductase 87.6 1.3 4.5E-05 45.4 8.3 114 42-157 7-136 (255)
350 2pd4_A Enoyl-[acyl-carrier-pro 87.5 3.1 0.00011 42.8 11.2 78 43-121 6-94 (275)
351 3ek2_A Enoyl-(acyl-carrier-pro 87.4 2.8 9.6E-05 42.6 10.7 116 41-157 12-151 (271)
352 3sxp_A ADP-L-glycero-D-mannohe 87.3 3.5 0.00012 43.9 11.8 72 42-121 9-100 (362)
353 3uve_A Carveol dehydrogenase ( 87.2 5.2 0.00018 41.3 12.8 79 42-122 10-115 (286)
354 1gy8_A UDP-galactose 4-epimera 87.2 3.3 0.00011 44.5 11.6 74 43-122 2-104 (397)
355 3u5t_A 3-oxoacyl-[acyl-carrier 87.2 3.6 0.00012 42.5 11.4 114 42-157 26-159 (267)
356 4egb_A DTDP-glucose 4,6-dehydr 87.2 2.1 7E-05 45.3 9.8 74 42-122 23-109 (346)
357 3un1_A Probable oxidoreductase 87.1 5 0.00017 41.2 12.4 79 42-122 27-107 (260)
358 3k31_A Enoyl-(acyl-carrier-pro 87.1 2.6 9E-05 44.2 10.5 115 42-157 29-166 (296)
359 3tpc_A Short chain alcohol deh 87.0 6.6 0.00023 39.9 13.2 79 42-122 6-92 (257)
360 3orf_A Dihydropteridine reduct 86.8 6.4 0.00022 39.9 13.0 111 43-157 22-142 (251)
361 1eg2_A Modification methylase 86.8 0.95 3.2E-05 48.8 6.9 67 84-160 39-107 (319)
362 1kol_A Formaldehyde dehydrogen 86.7 0.79 2.7E-05 50.3 6.4 110 40-157 183-298 (398)
363 3rft_A Uronate dehydrogenase; 86.7 5.1 0.00017 41.0 12.2 75 44-127 4-80 (267)
364 3m6i_A L-arabinitol 4-dehydrog 86.6 1.6 5.6E-05 47.0 8.8 98 40-158 177-282 (363)
365 3h7a_A Short chain dehydrogena 86.4 4.4 0.00015 41.3 11.5 78 42-122 6-94 (252)
366 3uog_A Alcohol dehydrogenase; 86.2 0.5 1.7E-05 51.3 4.4 95 40-158 187-286 (363)
367 1wma_A Carbonyl reductase [NAD 86.2 1.5 5E-05 44.5 7.7 114 42-157 3-136 (276)
368 2hun_A 336AA long hypothetical 86.2 4.1 0.00014 42.7 11.4 70 43-121 3-85 (336)
369 1vpt_A VP39; RNA CAP, poly(A) 86.2 10 0.00035 41.0 14.2 149 42-204 75-233 (348)
370 2nm0_A Probable 3-oxacyl-(acyl 86.1 8.7 0.0003 39.2 13.6 76 43-121 21-97 (253)
371 3gms_A Putative NADPH:quinone 86.0 1.6 5.6E-05 46.6 8.3 95 40-158 142-242 (340)
372 3pvc_A TRNA 5-methylaminomethy 86.0 0.8 2.7E-05 54.2 6.3 97 42-157 58-209 (689)
373 3e03_A Short chain dehydrogena 86.0 7.2 0.00025 40.2 13.0 79 42-122 5-101 (274)
374 3grk_A Enoyl-(acyl-carrier-pro 85.8 2.8 9.6E-05 43.9 9.8 115 42-157 30-167 (293)
375 4h15_A Short chain alcohol deh 85.8 5.9 0.0002 41.2 12.2 77 42-120 10-87 (261)
376 3sc4_A Short chain dehydrogena 85.7 8.2 0.00028 40.1 13.3 79 42-122 8-104 (285)
377 3uko_A Alcohol dehydrogenase c 85.5 2.4 8.3E-05 46.0 9.5 95 40-157 191-293 (378)
378 3t7c_A Carveol dehydrogenase; 85.2 9.9 0.00034 39.7 13.8 78 42-121 27-127 (299)
379 3lf2_A Short chain oxidoreduct 85.2 7 0.00024 40.0 12.4 79 42-122 7-98 (265)
380 4eez_A Alcohol dehydrogenase 1 85.1 1.1 3.8E-05 47.8 6.4 96 40-158 161-262 (348)
381 1cdo_A Alcohol dehydrogenase; 85.0 4.3 0.00015 43.9 11.1 95 40-157 190-292 (374)
382 2py6_A Methyltransferase FKBM; 85.0 0.78 2.7E-05 51.1 5.3 38 40-77 224-262 (409)
383 1v3u_A Leukotriene B4 12- hydr 84.7 1.2 4E-05 47.5 6.3 93 40-157 143-242 (333)
384 2pk3_A GDP-6-deoxy-D-LYXO-4-he 84.7 6.4 0.00022 40.8 12.0 78 37-121 6-84 (321)
385 3ioy_A Short-chain dehydrogena 84.7 2.9 0.0001 44.4 9.5 79 42-122 7-98 (319)
386 3r3s_A Oxidoreductase; structu 84.6 4.9 0.00017 42.0 11.0 114 42-157 48-183 (294)
387 3tjr_A Short chain dehydrogena 84.6 4 0.00014 42.9 10.4 79 42-122 30-119 (301)
388 2p91_A Enoyl-[acyl-carrier-pro 84.4 5 0.00017 41.6 10.9 79 42-121 20-109 (285)
389 3e9n_A Putative short-chain de 84.4 1 3.5E-05 45.6 5.4 77 43-122 5-86 (245)
390 1ej6_A Lambda2; icosahedral, n 84.3 2.5 8.5E-05 52.0 9.3 89 110-204 569-661 (1289)
391 1g0o_A Trihydroxynaphthalene r 84.2 5.1 0.00018 41.4 10.9 114 42-157 28-161 (283)
392 1e3i_A Alcohol dehydrogenase, 84.2 4 0.00014 44.2 10.4 95 40-157 193-295 (376)
393 3r1i_A Short-chain type dehydr 84.1 6.6 0.00023 40.7 11.7 79 42-122 31-120 (276)
394 4imr_A 3-oxoacyl-(acyl-carrier 84.0 8.8 0.0003 39.7 12.6 78 42-122 32-120 (275)
395 3fpc_A NADP-dependent alcohol 84.0 0.74 2.5E-05 49.6 4.4 96 40-157 164-264 (352)
396 1yde_A Retinal dehydrogenase/r 83.6 4.7 0.00016 41.5 10.3 78 42-121 8-92 (270)
397 2bgk_A Rhizome secoisolaricire 83.5 6.6 0.00022 40.0 11.2 78 42-121 15-102 (278)
398 3oec_A Carveol dehydrogenase ( 83.5 11 0.00037 39.9 13.2 79 42-122 45-146 (317)
399 2o23_A HADH2 protein; HSD17B10 83.5 9.4 0.00032 38.5 12.3 78 42-121 11-96 (265)
400 2jhf_A Alcohol dehydrogenase E 83.3 4.2 0.00014 44.0 10.1 95 40-157 189-291 (374)
401 3ps9_A TRNA 5-methylaminomethy 83.3 2.7 9.4E-05 49.4 9.3 37 42-78 66-113 (676)
402 3nrc_A Enoyl-[acyl-carrier-pro 83.3 6.7 0.00023 40.5 11.3 80 42-122 25-114 (280)
403 3kvo_A Hydroxysteroid dehydrog 83.3 11 0.00038 40.6 13.4 79 42-122 44-140 (346)
404 2pzm_A Putative nucleotide sug 83.3 10 0.00035 39.7 13.0 74 42-122 19-99 (330)
405 4ej6_A Putative zinc-binding d 83.2 0.93 3.2E-05 49.4 4.8 99 40-158 180-283 (370)
406 1qsg_A Enoyl-[acyl-carrier-pro 83.1 3.6 0.00012 42.1 9.0 78 43-121 9-97 (265)
407 4b7c_A Probable oxidoreductase 83.0 1.3 4.4E-05 47.2 5.8 93 40-157 147-246 (336)
408 3p19_A BFPVVD8, putative blue 83.0 7.1 0.00024 40.2 11.3 78 43-122 16-98 (266)
409 4e6p_A Probable sorbitol dehyd 83.0 5.6 0.00019 40.5 10.4 79 42-122 7-93 (259)
410 1p0f_A NADP-dependent alcohol 82.9 3.7 0.00013 44.4 9.5 95 40-157 189-291 (373)
411 3tsc_A Putative oxidoreductase 82.9 11 0.00036 38.8 12.6 79 42-122 10-112 (277)
412 1rjw_A ADH-HT, alcohol dehydro 82.8 2.4 8.3E-05 45.3 7.9 93 40-157 162-259 (339)
413 1yo6_A Putative carbonyl reduc 82.8 11 0.00038 37.3 12.4 78 43-122 3-92 (250)
414 4b79_A PA4098, probable short- 82.8 9.9 0.00034 39.3 12.2 74 42-121 10-88 (242)
415 3gvc_A Oxidoreductase, probabl 82.6 6.4 0.00022 40.9 10.8 79 42-122 28-114 (277)
416 3ged_A Short-chain dehydrogena 82.5 9.1 0.00031 39.6 11.8 77 44-122 3-86 (247)
417 2wyu_A Enoyl-[acyl carrier pro 82.3 3.4 0.00012 42.2 8.5 79 42-121 7-96 (261)
418 3ucx_A Short chain dehydrogena 82.2 6 0.00021 40.5 10.4 77 42-120 10-97 (264)
419 2dq4_A L-threonine 3-dehydroge 82.1 2 7E-05 45.9 6.9 90 42-157 164-260 (343)
420 3rkr_A Short chain oxidoreduct 82.1 6.2 0.00021 40.3 10.4 78 42-121 28-116 (262)
421 1oc2_A DTDP-glucose 4,6-dehydr 82.0 4.1 0.00014 42.9 9.2 69 44-121 5-85 (348)
422 3edm_A Short chain dehydrogena 81.9 9.5 0.00032 38.9 11.7 114 42-157 7-141 (259)
423 2ag5_A DHRS6, dehydrogenase/re 81.8 6.6 0.00023 39.6 10.4 74 43-122 6-85 (246)
424 1spx_A Short-chain reductase f 81.8 4.2 0.00014 41.7 9.0 77 43-121 6-96 (278)
425 1vj0_A Alcohol dehydrogenase, 81.8 1.7 5.8E-05 47.4 6.2 97 40-157 193-296 (380)
426 3o26_A Salutaridine reductase; 81.7 4.6 0.00016 41.7 9.3 79 42-122 11-102 (311)
427 1yb5_A Quinone oxidoreductase; 81.7 1.8 6.1E-05 46.7 6.4 94 40-157 168-267 (351)
428 3tzq_B Short-chain type dehydr 81.7 11 0.00038 38.7 12.2 79 42-122 10-96 (271)
429 4fs3_A Enoyl-[acyl-carrier-pro 81.6 14 0.00049 37.7 13.0 115 42-157 5-144 (256)
430 3zv4_A CIS-2,3-dihydrobiphenyl 81.6 7.2 0.00025 40.4 10.8 78 42-121 4-89 (281)
431 1ja9_A 4HNR, 1,3,6,8-tetrahydr 81.5 3.9 0.00013 41.5 8.6 114 42-157 20-153 (274)
432 1xkq_A Short-chain reductase f 81.4 3.2 0.00011 42.9 7.9 77 43-121 6-96 (280)
433 2a4k_A 3-oxoacyl-[acyl carrier 81.4 14 0.00049 37.7 12.9 77 43-121 6-90 (263)
434 3m1a_A Putative dehydrogenase; 81.3 5.2 0.00018 41.1 9.5 77 43-121 5-89 (281)
435 4egf_A L-xylulose reductase; s 81.3 4.4 0.00015 41.6 8.9 79 42-122 19-109 (266)
436 3nyw_A Putative oxidoreductase 81.2 7.4 0.00025 39.6 10.5 79 42-122 6-98 (250)
437 1yxm_A Pecra, peroxisomal tran 81.1 7 0.00024 40.5 10.5 77 43-121 18-110 (303)
438 3gaf_A 7-alpha-hydroxysteroid 80.9 6 0.00021 40.3 9.8 79 42-122 11-100 (256)
439 3pgx_A Carveol dehydrogenase; 80.8 15 0.00053 37.6 13.0 79 42-122 14-116 (280)
440 3gem_A Short chain dehydrogena 80.8 5.7 0.00019 40.8 9.6 78 43-122 27-110 (260)
441 2ew8_A (S)-1-phenylethanol deh 80.7 9.5 0.00033 38.5 11.1 79 42-122 6-93 (249)
442 2fzw_A Alcohol dehydrogenase c 80.7 4.2 0.00014 43.9 8.9 95 40-157 188-290 (373)
443 3s55_A Putative short-chain de 80.6 14 0.00047 38.0 12.4 79 42-122 9-110 (281)
444 2cfc_A 2-(R)-hydroxypropyl-COM 80.4 12 0.00042 37.3 11.7 77 43-121 2-90 (250)
445 3ppi_A 3-hydroxyacyl-COA dehyd 80.3 8 0.00027 39.7 10.5 74 42-118 29-110 (281)
446 3lyl_A 3-oxoacyl-(acyl-carrier 80.1 9 0.00031 38.4 10.6 78 43-122 5-93 (247)
447 4dqx_A Probable oxidoreductase 80.1 7 0.00024 40.5 10.0 79 42-122 26-112 (277)
448 2pd6_A Estradiol 17-beta-dehyd 80.0 5.3 0.00018 40.3 8.9 78 43-122 7-103 (264)
449 4fc7_A Peroxisomal 2,4-dienoyl 79.9 10 0.00034 39.1 11.1 78 42-121 26-115 (277)
450 3two_A Mannitol dehydrogenase; 79.9 2.1 7.2E-05 45.9 6.1 86 40-158 174-264 (348)
451 1w6u_A 2,4-dienoyl-COA reducta 79.8 5.3 0.00018 41.3 9.0 78 42-121 25-114 (302)
452 3qiv_A Short-chain dehydrogena 79.7 6.1 0.00021 39.8 9.3 78 42-121 8-96 (253)
453 3ak4_A NADH-dependent quinucli 79.6 17 0.00057 36.9 12.6 79 42-122 11-97 (263)
454 2hcy_A Alcohol dehydrogenase 1 79.4 3.2 0.00011 44.4 7.4 94 40-157 167-267 (347)
455 1yb1_A 17-beta-hydroxysteroid 79.4 15 0.00052 37.5 12.3 79 42-122 30-119 (272)
456 3gk3_A Acetoacetyl-COA reducta 79.0 15 0.0005 37.6 12.0 79 42-122 24-114 (269)
457 1x1t_A D(-)-3-hydroxybutyrate 78.9 8.4 0.00029 39.1 10.1 77 43-121 4-93 (260)
458 1h5q_A NADP-dependent mannitol 78.8 12 0.00042 37.5 11.2 79 42-122 13-103 (265)
459 2j3h_A NADP-dependent oxidored 78.7 2.3 7.7E-05 45.4 5.9 92 40-157 153-253 (345)
460 4gkb_A 3-oxoacyl-[acyl-carrier 78.6 18 0.00061 37.5 12.5 79 42-122 6-94 (258)
461 3ruf_A WBGU; rossmann fold, UD 78.5 6.3 0.00021 41.5 9.2 71 42-121 24-110 (351)
462 3ai3_A NADPH-sorbose reductase 78.4 9 0.00031 38.9 10.1 78 42-121 6-95 (263)
463 3enk_A UDP-glucose 4-epimerase 78.2 10 0.00035 39.7 10.7 74 42-122 4-89 (341)
464 2d8a_A PH0655, probable L-thre 77.9 2.3 8E-05 45.6 5.7 93 42-157 167-265 (348)
465 2q1w_A Putative nucleotide sug 77.9 16 0.00055 38.3 12.2 74 42-122 20-100 (333)
466 2eih_A Alcohol dehydrogenase; 77.9 1.7 5.8E-05 46.6 4.6 94 40-157 164-263 (343)
467 3pk0_A Short-chain dehydrogena 77.9 13 0.00046 37.8 11.3 79 42-122 9-99 (262)
468 3imf_A Short chain dehydrogena 77.9 13 0.00046 37.7 11.2 77 43-121 6-93 (257)
469 3uce_A Dehydrogenase; rossmann 77.8 7.7 0.00026 38.5 9.2 99 43-157 6-114 (223)
470 1rjd_A PPM1P, carboxy methyl t 77.8 3.9 0.00013 44.4 7.4 103 42-157 97-230 (334)
471 1xhl_A Short-chain dehydrogena 77.8 5.4 0.00018 41.9 8.3 79 42-122 25-117 (297)
472 2v6g_A Progesterone 5-beta-red 77.7 30 0.001 36.3 14.3 72 44-121 2-82 (364)
473 3tfo_A Putative 3-oxoacyl-(acy 77.6 9.7 0.00033 39.3 10.2 78 43-122 4-92 (264)
474 4eye_A Probable oxidoreductase 77.6 3.6 0.00012 44.1 7.0 91 40-157 157-255 (342)
475 1ae1_A Tropinone reductase-I; 77.5 9.9 0.00034 39.0 10.2 80 42-122 20-110 (273)
476 3awd_A GOX2181, putative polyo 77.4 11 0.00036 38.0 10.2 78 42-121 12-100 (260)
477 1sny_A Sniffer CG10964-PA; alp 77.4 21 0.00072 36.0 12.5 79 42-122 20-113 (267)
478 2x9g_A PTR1, pteridine reducta 77.3 14 0.00049 38.0 11.4 78 42-121 22-116 (288)
479 2q2v_A Beta-D-hydroxybutyrate 77.2 19 0.00066 36.3 12.2 78 43-122 4-90 (255)
480 3rih_A Short chain dehydrogena 77.1 12 0.00041 39.2 10.9 79 42-122 40-130 (293)
481 3svt_A Short-chain type dehydr 77.1 7.7 0.00026 40.0 9.2 78 42-121 10-101 (281)
482 4fgs_A Probable dehydrogenase 77.0 8.1 0.00028 40.6 9.4 114 42-157 28-157 (273)
483 3ftp_A 3-oxoacyl-[acyl-carrier 77.0 8.2 0.00028 39.8 9.4 79 42-122 27-116 (270)
484 1iy8_A Levodione reductase; ox 76.9 8.1 0.00028 39.4 9.3 78 42-121 12-102 (267)
485 3v8b_A Putative dehydrogenase, 76.9 9.5 0.00033 39.6 9.9 78 42-121 27-115 (283)
486 3slg_A PBGP3 protein; structur 76.7 3.7 0.00013 43.8 6.8 70 43-121 24-101 (372)
487 3uf0_A Short-chain dehydrogena 76.7 17 0.00057 37.5 11.6 78 42-122 30-117 (273)
488 2b5w_A Glucose dehydrogenase; 76.7 3 0.0001 44.9 6.2 86 44-158 174-272 (357)
489 1rpn_A GDP-mannose 4,6-dehydra 76.7 8.3 0.00028 40.2 9.5 74 41-121 12-96 (335)
490 1cyd_A Carbonyl reductase; sho 76.6 7.3 0.00025 38.8 8.6 75 42-122 6-87 (244)
491 1uls_A Putative 3-oxoacyl-acyl 76.5 16 0.00053 36.9 11.2 77 43-122 5-88 (245)
492 2jah_A Clavulanic acid dehydro 76.5 13 0.00045 37.4 10.6 78 43-122 7-95 (247)
493 4da9_A Short-chain dehydrogena 76.4 11 0.00039 38.9 10.3 78 42-121 28-117 (280)
494 4dry_A 3-oxoacyl-[acyl-carrier 76.3 9.1 0.00031 39.7 9.6 79 42-122 32-122 (281)
495 1xu9_A Corticosteroid 11-beta- 76.3 9 0.00031 39.5 9.5 75 42-118 27-113 (286)
496 2z1m_A GDP-D-mannose dehydrata 76.2 23 0.00077 36.8 12.7 72 43-121 3-85 (345)
497 1uzm_A 3-oxoacyl-[acyl-carrier 76.2 20 0.00069 36.1 11.9 77 42-121 14-91 (247)
498 3grp_A 3-oxoacyl-(acyl carrier 76.1 7.6 0.00026 40.0 8.8 79 42-122 26-112 (266)
499 1kew_A RMLB;, DTDP-D-glucose 4 76.1 6.9 0.00023 41.4 8.7 70 45-121 2-83 (361)
500 3nzo_A UDP-N-acetylglucosamine 76.0 5.1 0.00017 44.0 7.9 73 43-122 35-123 (399)
No 1
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=100.00 E-value=1.6e-36 Score=306.89 Aligned_cols=184 Identities=26% Similarity=0.437 Sum_probs=161.2
Q ss_pred hcCchhHHHHHHHhhhhhcCCCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCCCCCCceEEEccCCChhHHH
Q 003302 19 EHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRA 98 (832)
Q Consensus 19 e~gyrsRaafKLiqi~~kf~fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~~i~~V~~i~gDIt~~~~~~ 98 (832)
++|||+|++|||++|+.+|.++.++.+|||||||||+|+++++++ .+.|+|||++++.++++|.++++|+++..+..
T Consensus 2 ~~~yr~Ra~~KL~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~~~~~v~~~~~D~~~~~~~~ 78 (191)
T 3dou_A 2 SLQLRSRAAFKLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEMEEIAGVRFIRCDIFKETIFD 78 (191)
T ss_dssp --CTTSHHHHHHHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCCCCTTCEEEECCTTSSSHHH
T ss_pred CCCCCCcHHHHHHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccccCCCeEEEEccccCHHHHH
Confidence 589999999999999999999999999999999999999999987 67999999999999999999999999988777
Q ss_pred HHHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHHHHHcccc
Q 003302 99 RVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEK 178 (832)
Q Consensus 99 ~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~L~~~F~~ 178 (832)
.+...+.....+.||+|+||++|++.|.|..++..+..++..+|..|.++|+|||+||+++|.+..+..+++.|..+|..
T Consensus 79 ~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~~~~~~l~~~F~~ 158 (191)
T 3dou_A 79 DIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTNDFIAIWRKNFSS 158 (191)
T ss_dssp HHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHHHHHHHHGGGEEE
T ss_pred HHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHHHHHHHHHHhcCE
Confidence 66665541111368999999999999999999998889999999999999999999999999999989999999999999
Q ss_pred eEEecCCCCCCCCcceeEEEeeccCCC
Q 003302 179 VEVDKPAASRSASAEIYLLGIKYKAPA 205 (832)
Q Consensus 179 V~~~KP~sSR~~SaEiyvVc~gfk~p~ 205 (832)
|.++||.+||..|+|+|+||+||++..
T Consensus 159 v~~~kP~asR~~s~E~y~v~~~~~~~~ 185 (191)
T 3dou_A 159 YKISKPPASRGSSSEIYIMFFGFKAEG 185 (191)
T ss_dssp EEEECC------CCEEEEEEEEECCC-
T ss_pred EEEECCCCccCCCceEEEEEeeecccc
Confidence 999999999999999999999999853
No 2
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=99.97 E-value=4.4e-31 Score=279.58 Aligned_cols=166 Identities=23% Similarity=0.204 Sum_probs=140.5
Q ss_pred cCchhHHHHHHHhhhhhcCCCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCC---CCCCC------CceEEEcc
Q 003302 20 HGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVP---IAPIR------GAVSLEQD 90 (832)
Q Consensus 20 ~gyrsRaafKLiqi~~kf~fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp---~~~i~------~V~~i~gD 90 (832)
..|||||+|||+||+++| +|.++.+|||||||||+|+|+++..++. ..|+|+|+.. +.+++ ++.++..+
T Consensus 69 g~YrSRAAfKL~ei~eK~-~Lk~~~~VLDLGaAPGGWsQvAa~~~gv-~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~ 146 (282)
T 3gcz_A 69 GIAVSRGSAKLRWMEERG-YVKPTGIVVDLGCGRGGWSYYAASLKNV-KKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDK 146 (282)
T ss_dssp SBCSSTHHHHHHHHHHTT-SCCCCEEEEEETCTTCHHHHHHHTSTTE-EEEEEECCCCTTSCCCCCCCBTTGGGEEEECS
T ss_pred CCEecHHHHHHHHHHHhc-CCCCCCEEEEeCCCCCHHHHHHHHhcCC-CeeeeEEeccCccccccccccCCCceEEeeCC
Confidence 469999999999999999 8899999999999999999999987763 4788999973 44444 34555544
Q ss_pred CCChhHHHHHHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccC--cEEEEEEcC--CCCHH
Q 003302 91 ITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPK--GTFVTKVFR--SQDYS 166 (832)
Q Consensus 91 It~~~~~~~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpG--G~fV~KVFr--s~d~~ 166 (832)
+... .+.. ..||+|+||++|| +|.+..|++.++.| |..|..+|+|| |+||+|||+ +.++.
T Consensus 147 ~dv~--------~l~~---~~~DvVLSDmApn-sG~~~~D~~rs~~L----L~~A~~~Lk~g~~G~Fv~KvF~pyg~~~~ 210 (282)
T 3gcz_A 147 TDVF--------NMEV---IPGDTLLCDIGES-SPSIAVEEQRTLRV----LNCAKQWLQEGNYTEFCIKVLCPYTPLIM 210 (282)
T ss_dssp CCGG--------GSCC---CCCSEEEECCCCC-CSCHHHHHHHHHHH----HHHHHHHHHHHCCCEEEEEESCCCSHHHH
T ss_pred cchh--------hcCC---CCcCEEEecCccC-CCChHHHHHHHHHH----HHHHHHHcCCCCCCcEEEEEecCCCccHH
Confidence 3211 1222 5679999999999 88988999987665 78899999999 999999999 77889
Q ss_pred HHHHHHHHcccceEEecCCCCCCCCcceeEEEeeccCC
Q 003302 167 SVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAP 204 (832)
Q Consensus 167 ~ll~~L~~~F~~V~~~KP~sSR~~SaEiyvVc~gfk~p 204 (832)
.+++.|+++|..|.++|| +||+.|+|+|+||.+..++
T Consensus 211 ~l~~~lk~~F~~V~~~KP-aSR~~S~E~Y~V~~~r~n~ 247 (282)
T 3gcz_A 211 EELSRLQLKHGGGLVRVP-LSRNSTHEMYWVSGTRTDV 247 (282)
T ss_dssp HHHHHHHHHHCCEEECCT-TSCTTCCCEEEETTCCCCS
T ss_pred HHHHHHHHhcCCEEEEcC-CCcccCcceeEEEecCCCc
Confidence 999999999999999999 9999999999999987665
No 3
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=99.97 E-value=1.8e-31 Score=278.39 Aligned_cols=164 Identities=20% Similarity=0.173 Sum_probs=137.4
Q ss_pred cCchhHHHHHHHhhhhhcCCCCCCCEEEEEcCCcCHHHHHHHHhCCC---CCEEEEEe--CCCCCCC-CCceE---EEc-
Q 003302 20 HGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV---GSLVLGLD--LVPIAPI-RGAVS---LEQ- 89 (832)
Q Consensus 20 ~gyrsRaafKLiqi~~kf~fl~~g~~VLDLGcGPGg~sq~La~~~p~---~~~ViGVD--Lsp~~~i-~~V~~---i~g- 89 (832)
-+|||||+|||++|+++| ||+||++|||||||||||+|+++...+. .+.|+|+| +.||.++ +++.+ +++
T Consensus 52 g~yRSRAayKL~EIdeK~-likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~~~Gv~~i~~~~G~ 130 (269)
T 2px2_A 52 GHPVSRGTAKLRWLVERR-FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQSYGWNIVTMKSGV 130 (269)
T ss_dssp SCCSSTHHHHHHHHHHTT-SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSC
T ss_pred CCcccHHHHHHHHHHHcC-CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcccCCCceEEEeeccC
Confidence 379999999999999998 9999999999999999999999998433 46788889 5556555 67643 447
Q ss_pred cCCChhHHHHHHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCc-EEEEEEcCC--CCHH
Q 003302 90 DITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKG-TFVTKVFRS--QDYS 166 (832)
Q Consensus 90 DIt~~~~~~~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG-~fV~KVFrs--~d~~ 166 (832)
|++++. . .+||+|+||++|| +|.+..|+..++. +|..|.++|+||| .|++|||.+ ..+.
T Consensus 131 Df~~~~----------~---~~~DvVLSDMAPn-SG~~~vD~~Rs~~----aL~~A~~~Lk~gG~~FvvKVFqg~~~~~~ 192 (269)
T 2px2_A 131 DVFYKP----------S---EISDTLLCDIGES-SPSAEIEEQRTLR----ILEMVSDWLSRGPKEFCIKILCPYMPKVI 192 (269)
T ss_dssp CGGGSC----------C---CCCSEEEECCCCC-CSCHHHHHHHHHH----HHHHHHHHHTTCCSEEEEEESCTTSHHHH
T ss_pred CccCCC----------C---CCCCEEEeCCCCC-CCccHHHHHHHHH----HHHHHHHHhhcCCcEEEEEECCCCchHHH
Confidence 998732 2 4679999999999 8999999887654 8899999999999 999999996 4466
Q ss_pred HHHHHHHHcccceEEecCCCCCCCCcceeEEEeeccC
Q 003302 167 SVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKA 203 (832)
Q Consensus 167 ~ll~~L~~~F~~V~~~KP~sSR~~SaEiyvVc~gfk~ 203 (832)
.++..|+++|..|.+ +|++||..|+|+|+||..--+
T Consensus 193 ~~l~~lk~~F~~vkv-k~paSR~~S~E~YlVa~~~~n 228 (269)
T 2px2_A 193 EKLESLQRRFGGGLV-RVPLSRNSNHEMYWVSGASGN 228 (269)
T ss_dssp HHHHHHHHHHCCEEE-CCTTSCTTCCCEEEETTCCSC
T ss_pred HHHHHHHHHcCCEEE-ECCCCCCCCccEEEEecccCc
Confidence 667899999999996 666999999999999876543
No 4
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=99.97 E-value=2.7e-30 Score=273.28 Aligned_cols=165 Identities=22% Similarity=0.283 Sum_probs=138.7
Q ss_pred CchhHHHHHHHhhhhhcCCCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCC---CCCCCC------CceEEEccC
Q 003302 21 GYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLV---PIAPIR------GAVSLEQDI 91 (832)
Q Consensus 21 gyrsRaafKLiqi~~kf~fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLs---p~~~i~------~V~~i~gDI 91 (832)
.|||||||||++|+++ .++.++.+|||||||||+|+|+++...+. ..|+|+|+. ++.+++ ++.++++++
T Consensus 54 ~YrSRaA~KL~ei~ek-~~l~~~~~VLDLGaAPGGWSQvAa~~~~~-~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~ 131 (277)
T 3evf_A 54 VAVSRGTAKLRWFHER-GYVKLEGRVIDLGCGRGGWCYYAAAQKEV-SGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKT 131 (277)
T ss_dssp BCSSTHHHHHHHHHHT-TSSCCCEEEEEETCTTCHHHHHHHTSTTE-EEEEEECCCCTTCCCCCCCCBTTGGGEEEECSC
T ss_pred CccccHHHHHHHHHHh-CCCCCCCEEEEecCCCCHHHHHHHHhcCC-CcceeEEEeccCcccccccCcCCCCeEEEeccc
Confidence 4999999999999999 68899999999999999999999987653 355555555 444544 567777765
Q ss_pred CChhHHHHHHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccC-cEEEEEEcC--CCCHHHH
Q 003302 92 TKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPK-GTFVTKVFR--SQDYSSV 168 (832)
Q Consensus 92 t~~~~~~~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpG-G~fV~KVFr--s~d~~~l 168 (832)
... .+.+ ..||+|+||++|| +|.+..|++.++.| |..|.++|+|| |+||+|||+ +.++..+
T Consensus 132 dv~--------~l~~---~~~DlVlsD~apn-sG~~~~D~~rs~~L----L~~a~~~LkpG~G~FV~KVf~pyg~~~~~l 195 (277)
T 3evf_A 132 DIH--------RLEP---VKCDTLLCDIGES-SSSSVTEGERTVRV----LDTVEKWLACGVDNFCVKVLAPYMPDVLEK 195 (277)
T ss_dssp CTT--------TSCC---CCCSEEEECCCCC-CSCHHHHHHHHHHH----HHHHHHHHTTCCSEEEEEESCTTSHHHHHH
T ss_pred eeh--------hcCC---CCccEEEecCccC-cCchHHHHHHHHHH----HHHHHHHhCCCCCeEEEEecCCCCccHHHH
Confidence 321 1222 5679999999999 88888899887665 78999999999 999999999 6788999
Q ss_pred HHHHHHcccceEEecCCCCCCCCcceeEEEeeccCC
Q 003302 169 LYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAP 204 (832)
Q Consensus 169 l~~L~~~F~~V~~~KP~sSR~~SaEiyvVc~gfk~p 204 (832)
++.|+++|..|.++|| +||+.|+|+|+||.+..++
T Consensus 196 ~~~lk~~F~~V~~~KP-aSR~~S~E~Y~V~~~r~n~ 230 (277)
T 3evf_A 196 LELLQRRFGGTVIRNP-LSRNSTHEMYYVSGARSNV 230 (277)
T ss_dssp HHHHHHHHCCEEECCT-TSCTTCCCEEEESSCCCCH
T ss_pred HHHHHHhcCCEEEEeC-CCCCCCCceEEEEecCCCc
Confidence 9999999999999999 9999999999999887654
No 5
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.97 E-value=1.5e-29 Score=253.35 Aligned_cols=183 Identities=28% Similarity=0.539 Sum_probs=154.6
Q ss_pred CchhHHHHHHHhhhhhcCCCCCCCEEEEEcCCcCHHHHHHHHhCCC-CCEEEEEeCCCCCCCCCceEEEccCCChh----
Q 003302 21 GYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPV-GSLVLGLDLVPIAPIRGAVSLEQDITKPE---- 95 (832)
Q Consensus 21 gyrsRaafKLiqi~~kf~fl~~g~~VLDLGcGPGg~sq~La~~~p~-~~~ViGVDLsp~~~i~~V~~i~gDIt~~~---- 95 (832)
|||+|++|||+++..+|.++.++.+|||||||||+|+..++..++. .+.|+|||++++...+++.++++|+++..
T Consensus 1 ~~~~r~~~kl~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~~~~v~~~~~d~~~~~~~~~ 80 (201)
T 2plw_A 1 NYRSRAAYKLIELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDPIPNVYFIQGEIGKDNMNNI 80 (201)
T ss_dssp -CCSTTHHHHHHHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCCCTTCEEEECCTTTTSSCCC
T ss_pred CcchHHHHHHHHHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCCCCCceEEEccccchhhhhh
Confidence 7999999999999999999999999999999999999999999874 57999999999888889999999998764
Q ss_pred -------------HHHHHHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCC
Q 003302 96 -------------CRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRS 162 (832)
Q Consensus 96 -------------~~~~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs 162 (832)
+...+...+.. +.||+|++++++++.|.|..++.....++..++..+.++|+|||+|++.+|..
T Consensus 81 ~~~~~i~~~~~~~~~~~~~~~~~~---~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 157 (201)
T 2plw_A 81 KNINYIDNMNNNSVDYKLKEILQD---KKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLG 157 (201)
T ss_dssp -----------CHHHHHHHHHHTT---CCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred ccccccccccchhhHHHHHhhcCC---CcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCC
Confidence 22223222332 57899999999888787778887777777889999999999999999999998
Q ss_pred CCHHHHHHHHHHcccceEEecCCCCCCCCcceeEEEeeccCCCC
Q 003302 163 QDYSSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAK 206 (832)
Q Consensus 163 ~d~~~ll~~L~~~F~~V~~~KP~sSR~~SaEiyvVc~gfk~p~~ 206 (832)
.+...+++.+..+|..+.+++|.++|..++|.|+||.+|+++++
T Consensus 158 ~~~~~l~~~l~~~f~~v~~~~~~~~r~~s~e~y~v~~~~~~~~~ 201 (201)
T 2plw_A 158 SQTNNLKTYLKGMFQLVHTTKPKASRNESREIYLVCKNFLGRKK 201 (201)
T ss_dssp TTHHHHHHHHHTTEEEEEECCCC-----CCEEEEEEEEECCC--
T ss_pred CCHHHHHHHHHHHHheEEEECCcccCCcCceEEEEEecCccCCC
Confidence 88888999999999999999999999999999999999998754
No 6
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=99.96 E-value=4.5e-30 Score=273.34 Aligned_cols=166 Identities=23% Similarity=0.224 Sum_probs=140.0
Q ss_pred cCchhHHHHHHHhhhhhcCCCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC---CCCC------CceEEEcc
Q 003302 20 HGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI---APIR------GAVSLEQD 90 (832)
Q Consensus 20 ~gyrsRaafKLiqi~~kf~fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~---~~i~------~V~~i~gD 90 (832)
.+|||||+|||+|++++ +++.++.+|||||||||||+|++++.++. ..|+|+|+... .|++ ++.++..+
T Consensus 60 g~yrSRaa~KL~ei~ek-~l~~~g~~vlDLGaaPGgWsqva~~~~gv-~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~ 137 (300)
T 3eld_A 60 GISVSRGAAKIRWLHER-GYLRITGRVLDLGCGRGGWSYYAAAQKEV-MSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDK 137 (300)
T ss_dssp CCCSSTTHHHHHHHHHH-TSCCCCEEEEEETCTTCHHHHHHHTSTTE-EEEEEECCCCTTSCCCCCCCBTTGGGEEEECS
T ss_pred CCccchHHHHHHHHHHh-CCCCCCCEEEEcCCCCCHHHHHHHHhcCC-ceeeeEEeccccccccccccccCCceEEeecC
Confidence 47999999999999999 99999999999999999999999987653 47889999742 2322 33444432
Q ss_pred CCChhHHHHHHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccC-cEEEEEEcC--CCCHHH
Q 003302 91 ITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPK-GTFVTKVFR--SQDYSS 167 (832)
Q Consensus 91 It~~~~~~~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpG-G~fV~KVFr--s~d~~~ 167 (832)
+.-. .+.+ ..||+|+||++|| +|.|..|++.+..| |..|..+|+|| |+||+|||+ +.++..
T Consensus 138 ~di~--------~l~~---~~~DlVlsD~APn-sG~~~~D~~rs~~L----L~~A~~~LkpG~G~FV~KvF~~yG~~~~~ 201 (300)
T 3eld_A 138 SNVF--------TMPT---EPSDTLLCDIGES-SSNPLVERDRTMKV----LENFERWKHVNTENFCVKVLAPYHPDVIE 201 (300)
T ss_dssp CCTT--------TSCC---CCCSEEEECCCCC-CSSHHHHHHHHHHH----HHHHHHHCCTTCCEEEEEESSTTSHHHHH
T ss_pred ceee--------ecCC---CCcCEEeecCcCC-CCCHHHHHHHHHHH----HHHHHHHhcCCCCcEEEEeccccCccHHH
Confidence 2110 1222 5679999999999 89999999988776 78899999999 999999999 778999
Q ss_pred HHHHHHHcccceEEecCCCCCCCCcceeEEEeeccCC
Q 003302 168 VLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAP 204 (832)
Q Consensus 168 ll~~L~~~F~~V~~~KP~sSR~~SaEiyvVc~gfk~p 204 (832)
+++.|+++|..|.++|| +||+.|+|+|+||.++.++
T Consensus 202 ll~~lk~~F~~V~~~KP-aSR~~S~E~Y~V~~~r~n~ 237 (300)
T 3eld_A 202 KLERLQLRFGGGIVRVP-FSRNSTHEMYYISGARNNI 237 (300)
T ss_dssp HHHHHHHHHCCEEECCT-TSCTTCCCEEEESSCCCCH
T ss_pred HHHHHHHhCCcEEEEeC-CCCCCChHHeeeccCCCCc
Confidence 99999999999999999 9999999999999998664
No 7
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.96 E-value=8.6e-28 Score=239.27 Aligned_cols=184 Identities=35% Similarity=0.586 Sum_probs=154.7
Q ss_pred CchhHHHHHHHhhhhhcCCCCCCCEEEEEcCCcCHHHHHHHHhCCCC--------CEEEEEeCCCCCCCCCceEE-EccC
Q 003302 21 GYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVG--------SLVLGLDLVPIAPIRGAVSL-EQDI 91 (832)
Q Consensus 21 gyrsRaafKLiqi~~kf~fl~~g~~VLDLGcGPGg~sq~La~~~p~~--------~~ViGVDLsp~~~i~~V~~i-~gDI 91 (832)
|||+|++|+|+++...|.++.++.+|||||||||.|+..++..++.. +.|+|||++++..++++.++ ++|+
T Consensus 1 ~~~~r~~~kl~~l~~~~~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~~~~~~~~~~~d~ 80 (196)
T 2nyu_A 1 SYRSRSAFKLLEVNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLEGATFLCPADV 80 (196)
T ss_dssp CCSSTHHHHHHHHHHHHCCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCCCTTCEEECSCCT
T ss_pred CchhHHHHHHHHHHHhcCCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcccCCCCeEEEeccC
Confidence 79999999999999999999999999999999999999999998643 79999999998878899999 9999
Q ss_pred CChhHHHHHHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHH
Q 003302 92 TKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYC 171 (832)
Q Consensus 92 t~~~~~~~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~ 171 (832)
+.......+...+.+ ..||+|+|++++++.+.|..++.....++..++..+.++|+|||+|++.+|.......++..
T Consensus 81 ~~~~~~~~~~~~~~~---~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~ 157 (196)
T 2nyu_A 81 TDPRTSQRILEVLPG---RRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRLQRR 157 (196)
T ss_dssp TSHHHHHHHHHHSGG---GCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGGGHHHHHH
T ss_pred CCHHHHHHHHHhcCC---CCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCccHHHHHHH
Confidence 987665555444443 46899999999998888888887777777889999999999999999999988888888999
Q ss_pred HHHcccceEEecCCCCCCCCcceeEEEeeccCCCCC
Q 003302 172 LKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKI 207 (832)
Q Consensus 172 L~~~F~~V~~~KP~sSR~~SaEiyvVc~gfk~p~~i 207 (832)
+..+|..+.+++|.++|..+.|.|+||.||+++..+
T Consensus 158 l~~~f~~v~~~~~~~~~~~~~e~~~v~~g~~~~~~~ 193 (196)
T 2nyu_A 158 LTEEFQNVRIIKPEASRKESSEVYFLATQYHGRKGT 193 (196)
T ss_dssp HHHHEEEEEEECCC--------EEEEEEEECCC---
T ss_pred HHHHhcceEEECCcccCccCceEEEEeeecCCcccc
Confidence 999999999999999999999999999999987653
No 8
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.91 E-value=5.1e-23 Score=198.40 Aligned_cols=180 Identities=32% Similarity=0.518 Sum_probs=156.1
Q ss_pred CchhHHHHHHHhhhhhcCCCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCCCCCCceEEEccCCChhHHHHH
Q 003302 21 GYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARV 100 (832)
Q Consensus 21 gyrsRaafKLiqi~~kf~fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~~i~~V~~i~gDIt~~~~~~~l 100 (832)
+|++|++++|.++...|.++.++.+|||+|||+|.++..++..+++++.|+|+|++++..++++.++++|+.+......+
T Consensus 1 ~y~~r~~~~l~~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~~~~~~~~d~~~~~~~~~~ 80 (180)
T 1ej0_A 1 GLRSRAWFKLDEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPIVGVDFLQGDFRDELVMKAL 80 (180)
T ss_dssp CCSCHHHHHHHHHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCCCCTTEEEEESCTTSHHHHHHH
T ss_pred CcchhHHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECccccccCcEEEEEcccccchhhhhh
Confidence 69999999999999999988999999999999999999999986556799999999976778899999999987644444
Q ss_pred HHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHHHHHcccceE
Q 003302 101 KKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE 180 (832)
Q Consensus 101 ~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~L~~~F~~V~ 180 (832)
...+.. +.||+|++++++.+.+.+..++.....+...++..+.++|+|||+|++.++.......+...+..+|..+.
T Consensus 81 ~~~~~~---~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (180)
T 1ej0_A 81 LERVGD---SKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRSLFTKVK 157 (180)
T ss_dssp HHHHTT---CCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHHHEEEEE
T ss_pred hccCCC---CceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHHHHHhhhhEE
Confidence 433433 67899999998777667666666666666788999999999999999999988888888889999999999
Q ss_pred EecCCCCCCCCcceeEEEeeccC
Q 003302 181 VDKPAASRSASAEIYLLGIKYKA 203 (832)
Q Consensus 181 ~~KP~sSR~~SaEiyvVc~gfk~ 203 (832)
+.+|.++|..+.++|+||.+|++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~ 180 (180)
T 1ej0_A 158 VRKPDSSRARSREVYIVATGRKP 180 (180)
T ss_dssp EECCTTSCTTCCEEEEEEEEECC
T ss_pred eecCCcccccCceEEEEEccCCC
Confidence 99999999999999999999973
No 9
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.90 E-value=4.5e-24 Score=226.86 Aligned_cols=159 Identities=21% Similarity=0.288 Sum_probs=134.9
Q ss_pred CchhHHHHHHHhhhhhcCCCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC------CCCC------CceEE-
Q 003302 21 GYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI------APIR------GAVSL- 87 (832)
Q Consensus 21 gyrsRaafKLiqi~~kf~fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~------~~i~------~V~~i- 87 (832)
.|++|++|||.++..+ .++.++.+|||||||||+|++++++. +.|+|||+++| .+++ +|.++
T Consensus 54 ~~~sR~a~KL~~i~~~-~~~~~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~ 128 (265)
T 2oxt_A 54 LSVSRGTAKLAWMEER-GYVELTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYTLGVGGHEVPRITESYGWNIVKFK 128 (265)
T ss_dssp BCSSTHHHHHHHHHHH-TSCCCCEEEEEESCTTSHHHHHHHTS----TTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEE
T ss_pred CccchHHHHHHHHHHc-CCCCCCCEEEEeCcCCCHHHHHHHHc----CcEEEEECchhhhhhhhhhhhhhccCCCeEEEe
Confidence 5999999999999888 77889999999999999999999986 58999999997 3444 68999
Q ss_pred -EccCCChhHHHHHHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCc--EEEEEEcCCCC
Q 003302 88 -EQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKG--TFVTKVFRSQD 164 (832)
Q Consensus 88 -~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG--~fV~KVFrs~d 164 (832)
++|+++++ . ..||+|+||++ ++.+.|..++..+ ..+|..+.++|+||| +|++++|. ..
T Consensus 129 ~~~D~~~l~----------~---~~fD~V~sd~~-~~~~~~~~d~~~~----l~~L~~~~r~LkpGG~~~fv~kv~~-~~ 189 (265)
T 2oxt_A 129 SRVDIHTLP----------V---ERTDVIMCDVG-ESSPKWSVESERT----IKILELLEKWKVKNPSADFVVKVLC-PY 189 (265)
T ss_dssp CSCCTTTSC----------C---CCCSEEEECCC-CCCSCHHHHHHHH----HHHHHHHHHHHHHCTTCEEEEEESC-TT
T ss_pred cccCHhHCC----------C---CCCcEEEEeCc-ccCCccchhHHHH----HHHHHHHHHHhccCCCeEEEEEeCC-CC
Confidence 99998732 1 67899999988 7777777666543 227788999999999 99999999 44
Q ss_pred HH---HHHHHHHHcccceEEecCCCCCCCCcceeEEEeeccCC
Q 003302 165 YS---SVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAP 204 (832)
Q Consensus 165 ~~---~ll~~L~~~F~~V~~~KP~sSR~~SaEiyvVc~gfk~p 204 (832)
.. .++..+..+|..+.+++ .+||+.|+|+|+||.++..+
T Consensus 190 ~~~~~~~l~~l~~~f~~v~~~k-~~sR~~s~E~y~v~~~~~~~ 231 (265)
T 2oxt_A 190 SVEVMERLSVMQRKWGGGLVRN-PYSRNSTHEMYFTSRAGGNI 231 (265)
T ss_dssp SHHHHHHHHHHHHHHCCEEECC-TTSCTTCCCEEEESSCCSCH
T ss_pred ChhHHHHHHHHHHHcCCEEEEE-ecccCCCccEEEEecCCCCc
Confidence 45 67788889999999999 88999999999999887654
No 10
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=99.90 E-value=1.2e-23 Score=216.18 Aligned_cols=156 Identities=22% Similarity=0.200 Sum_probs=132.6
Q ss_pred cCchhHHHHHHHhhhhhcCCCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCCCC----------CCceEEEc
Q 003302 20 HGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIAPI----------RGAVSLEQ 89 (832)
Q Consensus 20 ~gyrsRaafKLiqi~~kf~fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~~i----------~~V~~i~g 89 (832)
.+||||++|||.+|+++| +|.++++|||||||||||+|+++...++ ..|+|+|+.++... +.|+|.++
T Consensus 57 g~yrSRa~~KL~ei~ek~-~l~~g~~VvDLGaapGGWSq~~a~~~g~-~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~g 134 (267)
T 3p8z_A 57 HHAVSRGSAKLQWFVERN-MVIPEGRVIDLGCGRGGWSYYCAGLKKV-TEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSG 134 (267)
T ss_dssp SCCSSTHHHHHHHHHHTT-SSCCCEEEEEESCTTSHHHHHHHTSTTE-EEEEEECCCSTTSCCCCCCCCTTTTSEEEECS
T ss_pred CCccchHHHHHHHHHHhc-CCCCCCEEEEcCCCCCcHHHHHHHhcCC-CEEEEEecCCCCccCcchhhhcCcCceEEEec
Confidence 379999999999999999 7899999999999999999999988764 48999999975322 56889999
Q ss_pred -cCCChhHHHHHHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCC--HH
Q 003302 90 -DITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQD--YS 166 (832)
Q Consensus 90 -DIt~~~~~~~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d--~~ 166 (832)
|+.... . .+||+|+||.+| .++.+..++... +.+|.++.++|++ |.|+||||.+.. ..
T Consensus 135 vDv~~~~----------~---~~~DtllcDIge-Ss~~~~vE~~Rt----lrvLela~~wL~~-~~fc~KVl~py~p~v~ 195 (267)
T 3p8z_A 135 KDVFYLP----------P---EKCDTLLCDIGE-SSPSPTVEESRT----IRVLKMVEPWLKN-NQFCIKVLNPYMPTVI 195 (267)
T ss_dssp CCGGGCC----------C---CCCSEEEECCCC-CCSCHHHHHHHH----HHHHHHHGGGCSS-CEEEEEESCCCSHHHH
T ss_pred cceeecC----------C---ccccEEEEecCC-CCCChhhhhhHH----HHHHHHHHHhccc-CCEEEEEccCCChhHH
Confidence 975422 2 567999999998 566666666543 3488899999999 899999999988 55
Q ss_pred HHHHHHHHcccceEEecCCCCCCCCcceeEE
Q 003302 167 SVLYCLKQLFEKVEVDKPAASRSASAEIYLL 197 (832)
Q Consensus 167 ~ll~~L~~~F~~V~~~KP~sSR~~SaEiyvV 197 (832)
..+..|+..|..+.+.+|. ||++|.|+|+|
T Consensus 196 e~l~~lq~~fgg~lVR~P~-SRnsThEMY~V 225 (267)
T 3p8z_A 196 EHLERLQRKHGGMLVRNPL-SRNSTHEMYWI 225 (267)
T ss_dssp HHHHHHHHHHCCEEECCTT-SCTTCCCEEEE
T ss_pred HHHHHHHHHhCCEeEeCCC-CCCCcceEEEE
Confidence 6788889999999999999 99999999999
No 11
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.90 E-value=9.4e-24 Score=228.66 Aligned_cols=161 Identities=20% Similarity=0.168 Sum_probs=134.6
Q ss_pred cCchhHHHHHHHhhhhhcCCCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeC----CC--CC-----CC--CCceE
Q 003302 20 HGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDL----VP--IA-----PI--RGAVS 86 (832)
Q Consensus 20 ~gyrsRaafKLiqi~~kf~fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDL----sp--~~-----~i--~~V~~ 86 (832)
.+||+|++|||.+++.+ .++.++.+|||||||||+|+++|+++ +.|+|||+ ++ +. +. ++|.+
T Consensus 61 ~~~~sR~a~KL~~i~~~-~~~~~g~~VLDlGcG~G~~s~~la~~----~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~ 135 (305)
T 2p41_A 61 HHAVSRGSAKLRWFVER-NLVTPEGKVVDLGCGRGGWSYYCGGL----KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRL 135 (305)
T ss_dssp SCCSSTHHHHHHHHHHT-TSSCCCEEEEEETCTTSHHHHHHHTS----TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEE
T ss_pred CCccccHHHHHHHHHHc-CCCCCCCEEEEEcCCCCHHHHHHHhc----CCEEEEeccccCchhHHHHHHhhhcCCCCeEE
Confidence 47899999999999888 77889999999999999999999987 37999999 33 21 22 56888
Q ss_pred EEc-cCCChhHHHHHHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCC-
Q 003302 87 LEQ-DITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQD- 164 (832)
Q Consensus 87 i~g-DIt~~~~~~~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d- 164 (832)
+++ |++.++ ...||+|+||++++ .+.|..++..+ +.+|..+.++|+|||+|++++|.+..
T Consensus 136 ~~~~D~~~l~-------------~~~fD~V~sd~~~~-~g~~~~d~~~~----l~~L~~~~~~LkpGG~~v~kv~~~~~~ 197 (305)
T 2p41_A 136 QSGVDVFFIP-------------PERCDTLLCDIGES-SPNPTVEAGRT----LRVLNLVENWLSNNTQFCVKVLNPYMS 197 (305)
T ss_dssp ECSCCTTTSC-------------CCCCSEEEECCCCC-CSSHHHHHHHH----HHHHHHHHHHCCTTCEEEEEESCCCSH
T ss_pred EeccccccCC-------------cCCCCEEEECCccc-cCcchhhHHHH----HHHHHHHHHHhCCCCEEEEEeCCCCCc
Confidence 898 888642 15789999999987 67777766543 24778889999999999999998854
Q ss_pred -HHHHHHHHHHcccceEEecCCCCCCCCcceeEEEeeccCC
Q 003302 165 -YSSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAP 204 (832)
Q Consensus 165 -~~~ll~~L~~~F~~V~~~KP~sSR~~SaEiyvVc~gfk~p 204 (832)
...++..+..+|..|.+.+| +||..++|+|+||.||...
T Consensus 198 ~~~~~l~~l~~~f~~v~~~kP-~sR~~s~E~y~v~~~~~~~ 237 (305)
T 2p41_A 198 SVIEKMEALQRKHGGALVRNP-LSRNSTHEMYWVSNASGNI 237 (305)
T ss_dssp HHHHHHHHHHHHHCCEEECCT-TSCTTCCCEEEETTCCCCH
T ss_pred hHHHHHHHHHHHcCCEEEecC-CCCCccHHHHHHHhccCCc
Confidence 45788888999999999999 9999999999999999753
No 12
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=99.89 E-value=2.4e-23 Score=219.60 Aligned_cols=162 Identities=23% Similarity=0.269 Sum_probs=137.9
Q ss_pred CCCCEEEEEcC------CcCHHHHHHHHhCCCCCEEEEEeCCCCCCCCCceEEEccCCChhHHHHHHHHHhhccCCcccE
Q 003302 41 RSSHAVLDLCA------APGGWMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114 (832)
Q Consensus 41 ~~g~~VLDLGc------GPGg~sq~La~~~p~~~~ViGVDLsp~~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDl 114 (832)
+.|++|||||| +||+| ++.+..|.++.||++||.++...+++ +++||+++... .++||+
T Consensus 108 p~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~sda~~-~IqGD~~~~~~------------~~k~DL 172 (344)
T 3r24_A 108 PYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVSDADS-TLIGDCATVHT------------ANKWDL 172 (344)
T ss_dssp CTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBCSSSE-EEESCGGGEEE------------SSCEEE
T ss_pred cCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCcccccCCCe-EEEcccccccc------------CCCCCE
Confidence 46899999996 99995 67777665579999999999877774 59999876321 167899
Q ss_pred EEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHHHHHcccceEEecCCCCCCCCcce
Q 003302 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASAEI 194 (832)
Q Consensus 115 VlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~L~~~F~~V~~~KP~sSR~~SaEi 194 (832)
|+||++||.+|.-..+......|+..++..|.++|+|||.|++|||.+... ..+..+.++|..|+++| .+||..|+|+
T Consensus 173 VISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg~-~~L~~lrk~F~~VK~fK-~ASRa~SsEv 250 (344)
T 3r24_A 173 IISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWN-ADLYKLMGHFSWWTAFV-TNVNASSSEA 250 (344)
T ss_dssp EEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCC-HHHHHHHTTEEEEEEEE-EGGGTTSSCE
T ss_pred EEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCCH-HHHHHHHhhCCeEEEEC-CCCCCCCeeE
Confidence 999999999998666666677899999999999999999999999999884 55666778999999997 5999999999
Q ss_pred eEEEeeccCC--CCCCCCccchhhhcc
Q 003302 195 YLLGIKYKAP--AKIDPRLLDVKYLFQ 219 (832)
Q Consensus 195 yvVc~gfk~p--~~id~~~ldp~~vf~ 219 (832)
|+||.||+++ ..||...+...|||=
T Consensus 251 YLVG~gfKg~~~~~idg~~~hanyifw 277 (344)
T 3r24_A 251 FLIGANYLGKPKEQIDGYTMHANYIFW 277 (344)
T ss_dssp EEEEEEECSSCSSCCCHHHHHHHHHHH
T ss_pred EEEeeeccCCCceeeccceeeeeeEEe
Confidence 9999999997 348888999999993
No 13
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.88 E-value=7.5e-23 Score=218.67 Aligned_cols=158 Identities=22% Similarity=0.254 Sum_probs=130.1
Q ss_pred CchhHHHHHHHhhhhhcCCCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC------CCCC------CceEE-
Q 003302 21 GYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI------APIR------GAVSL- 87 (832)
Q Consensus 21 gyrsRaafKLiqi~~kf~fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~------~~i~------~V~~i- 87 (832)
.|++|++|||.++... .++.++.+|||||||||+|+++++++ +.|+|||+++| .+++ ++.++
T Consensus 62 ~~~sR~a~KL~~i~~~-~~~~~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~ 136 (276)
T 2wa2_A 62 HAVSRGTAKLAWIDER-GGVELKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYTLGTSGHEKPRLVETFGWNLITFK 136 (276)
T ss_dssp ---CHHHHHHHHHHHT-TSCCCCEEEEEESCTTCHHHHHHHTS----TTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEE
T ss_pred CcCchHHHHHHHHHHc-CCCCCCCEEEEeccCCCHHHHHHHHc----CCEEEEECchhhhhhhhchhhhhhcCCCeEEEe
Confidence 5999999999999887 67789999999999999999999986 48999999997 3444 68899
Q ss_pred -EccCCChhHHHHHHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCc--EEEEEEcCCCC
Q 003302 88 -EQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKG--TFVTKVFRSQD 164 (832)
Q Consensus 88 -~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG--~fV~KVFrs~d 164 (832)
++|+++++ . +.||+|+||.+ ++.+.|..++..+ ..+|..+.++|+||| .|++++|.+..
T Consensus 137 ~~~D~~~l~----------~---~~fD~Vvsd~~-~~~~~~~~d~~~~----l~~L~~~~r~LkpGG~~~~v~~~~~~~~ 198 (276)
T 2wa2_A 137 SKVDVTKME----------P---FQADTVLCDIG-ESNPTAAVEASRT----LTVLNVISRWLEYNQGCGFCVKVLNPYS 198 (276)
T ss_dssp CSCCGGGCC----------C---CCCSEEEECCC-CCCSCHHHHHHHH----HHHHHHHHHHHHHSTTCEEEEEESCCCS
T ss_pred ccCcHhhCC----------C---CCcCEEEECCC-cCCCchhhhHHHH----HHHHHHHHHHhccCCCcEEEEEeCCCCc
Confidence 99998632 1 67899999988 7777776665543 237788899999999 99999999543
Q ss_pred HH---HHHHHHHHcccceEEecCCCCCCCCcceeEEEeeccC
Q 003302 165 YS---SVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKA 203 (832)
Q Consensus 165 ~~---~ll~~L~~~F~~V~~~KP~sSR~~SaEiyvVc~gfk~ 203 (832)
. .++..+..+|..+.++ |.+||..|+|+|+||.++..
T Consensus 199 -~~~~~~l~~l~~~f~~v~v~-P~~sR~~s~E~y~v~~~~~~ 238 (276)
T 2wa2_A 199 -CDVLEALMKMQARFGGGLIR-VPLSRNSTHEMYFVSGIKNN 238 (276)
T ss_dssp -HHHHHHHHHHHHHHCCEEEC-CTTSCTTCCCEEEESSCCCC
T ss_pred -hhHHHHHHHHHHHcCCEEEE-cCCCCCcchheEEecccCCC
Confidence 4 6677888899999998 99999999999999987654
No 14
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=99.86 E-value=1.9e-21 Score=205.98 Aligned_cols=158 Identities=21% Similarity=0.206 Sum_probs=130.2
Q ss_pred CchhHHHHHHHhhhhhcCCCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC---CCC-------CCceEEEc-
Q 003302 21 GYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI---API-------RGAVSLEQ- 89 (832)
Q Consensus 21 gyrsRaafKLiqi~~kf~fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~---~~i-------~~V~~i~g- 89 (832)
.||||++|||.+++++|. |.++.+|||||||||||+|+++...++ ..|+|+|+... .|. +.|+++++
T Consensus 74 ~y~SR~~~KL~ei~~~~~-l~~~~~VlDLGaapGGwsq~~~~~~gv-~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~ 151 (321)
T 3lkz_A 74 HPVSRGTAKLRWLVERRF-LEPVGKVIDLGCGRGGWCYYMATQKRV-QEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGV 151 (321)
T ss_dssp CCSSTHHHHHHHHHHTTS-CCCCEEEEEETCTTCHHHHHHTTCTTE-EEEEEECCCSTTSCCCCCCCBTTGGGEEEECSC
T ss_pred CccchHHHHHHHHHHhcC-CCCCCEEEEeCCCCCcHHHHHHhhcCC-CEEEEEEcCCCCccCcchhhhcCCcceEEEecc
Confidence 399999999999999964 578889999999999999999887664 48999999875 221 23777877
Q ss_pred cCCChhHHHHHHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccC-cEEEEEEcCCC--CHH
Q 003302 90 DITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPK-GTFVTKVFRSQ--DYS 166 (832)
Q Consensus 90 DIt~~~~~~~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpG-G~fV~KVFrs~--d~~ 166 (832)
|+..+. . .+||+|+||.+ ..++.+..++... +.+|.++.++|++| |.|+||||.+. .+.
T Consensus 152 Dv~~l~----------~---~~~D~ivcDig-eSs~~~~ve~~Rt----l~vLel~~~wL~~~~~~f~~KVl~pY~~~v~ 213 (321)
T 3lkz_A 152 DVFYRP----------S---ECCDTLLCDIG-ESSSSAEVEEHRT----IRVLEMVEDWLHRGPREFCVKVLCPYMPKVI 213 (321)
T ss_dssp CTTSSC----------C---CCCSEEEECCC-CCCSCHHHHHHHH----HHHHHHHHHHHTTCCCEEEEEESCTTSHHHH
T ss_pred CHhhCC----------C---CCCCEEEEECc-cCCCChhhhhhHH----HHHHHHHHHHhccCCCcEEEEEcCCCChHHH
Confidence 886643 1 45799999998 6667766666543 34888999999999 99999999994 555
Q ss_pred HHHHHHHHcccceEEecCCCCCCCCcceeEEEe
Q 003302 167 SVLYCLKQLFEKVEVDKPAASRSASAEIYLLGI 199 (832)
Q Consensus 167 ~ll~~L~~~F~~V~~~KP~sSR~~SaEiyvVc~ 199 (832)
..+..|+..|..+.+.+|. ||+++.|+|+|.-
T Consensus 214 e~l~~lq~~fgg~lvr~P~-SRnst~EmY~vsG 245 (321)
T 3lkz_A 214 EKMELLQRRYGGGLVRNPL-SRNSTHEMYWVSR 245 (321)
T ss_dssp HHHHHHHHHHCCEEECCTT-SCTTCCCEEEETT
T ss_pred HHHHHHHHHhCCEeEeCCC-CCCCcceEEEEec
Confidence 6788899999999999999 9999999999853
No 15
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.83 E-value=4e-21 Score=206.75 Aligned_cols=164 Identities=22% Similarity=0.278 Sum_probs=137.7
Q ss_pred cCCCCCCCEEEEEcC------CcCHHHHHHHHhCCCCCEEEEEeCCCCCCCCCceE-EEccCCChhHHHHHHHHHhhccC
Q 003302 37 FSFLRSSHAVLDLCA------APGGWMQVAVQRVPVGSLVLGLDLVPIAPIRGAVS-LEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 37 f~fl~~g~~VLDLGc------GPGg~sq~La~~~p~~~~ViGVDLsp~~~i~~V~~-i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
+..+.++.+|||||| |||+ ++++.+++.++.|+|||+++. +++|.+ +++|++++.+ .
T Consensus 58 ~l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--v~~v~~~i~gD~~~~~~------------~ 121 (290)
T 2xyq_A 58 TLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--VSDADSTLIGDCATVHT------------A 121 (290)
T ss_dssp CCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--BCSSSEEEESCGGGCCC------------S
T ss_pred hcCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--CCCCEEEEECccccCCc------------c
Confidence 334688999999999 7788 777888887789999999998 678999 9999987431 1
Q ss_pred CcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHHHHHc-ccceEEecCCCCC
Q 003302 110 RAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL-FEKVEVDKPAASR 188 (832)
Q Consensus 110 ~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~L~~~-F~~V~~~KP~sSR 188 (832)
+.||+|+||++++..+.|..++..+..++..+|..+.++|+|||+|++++|.......+...|+.+ |..|.++ +||
T Consensus 122 ~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~~GF~~v~~~---asr 198 (290)
T 2xyq_A 122 NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHFSWWTAFVT---NVN 198 (290)
T ss_dssp SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTEEEEEEEEE---GGG
T ss_pred CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHHcCCcEEEEE---EcC
Confidence 578999999988877777766665566777899999999999999999999988888899999998 9888877 899
Q ss_pred CCCcceeEEEeeccCC--CCCCCCccchhhhcc
Q 003302 189 SASAEIYLLGIKYKAP--AKIDPRLLDVKYLFQ 219 (832)
Q Consensus 189 ~~SaEiyvVc~gfk~p--~~id~~~ldp~~vf~ 219 (832)
..++|+|+||.+|+++ ..+++.++++.|+|.
T Consensus 199 ~~s~e~~lv~~~~~~~~~~~i~~~~~h~~~i~~ 231 (290)
T 2xyq_A 199 ASSSEAFLIGANYLGKPKEQIDGYTMHANYIFW 231 (290)
T ss_dssp TTSSCEEEEEEEECSSCSSCCCHHHHHHHHHHH
T ss_pred CCchheEEecCCccCCCcccCCccccccceEEE
Confidence 9999999999999987 346788889999993
No 16
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.56 E-value=1.1e-14 Score=152.59 Aligned_cols=172 Identities=14% Similarity=0.156 Sum_probs=125.2
Q ss_pred cCCCC-CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCC-CceEEEccCCChhHHHHHHHH
Q 003302 37 FSFLR-SSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIR-GAVSLEQDITKPECRARVKKV 103 (832)
Q Consensus 37 f~fl~-~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~-~V~~i~gDIt~~~~~~~l~~~ 103 (832)
|.-+. ++.+|||||||+|.++..++.+.+ +.|+|||+++.. .+. ++.++++|+.+... .
T Consensus 43 ~~~~~~~~~~vLDlG~G~G~~~~~la~~~~--~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~------~ 114 (259)
T 3lpm_A 43 FSYLPIRKGKIIDLCSGNGIIPLLLSTRTK--AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITD------L 114 (259)
T ss_dssp HCCCCSSCCEEEETTCTTTHHHHHHHTTCC--CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGG------T
T ss_pred HhcCCCCCCEEEEcCCchhHHHHHHHHhcC--CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhh------h
Confidence 33356 789999999999999999998854 399999999721 333 58999999987431 0
Q ss_pred HhhccCCcccEEEeCCCCCCC---CCchhHH------hHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHHHHH
Q 003302 104 MEEHGVRAFDLVLHDGSPNVG---GAWAQEA------MSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQ 174 (832)
Q Consensus 104 L~~~~~~~FDlVlsDgapnv~---g~w~~D~------~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~L~~ 174 (832)
+ ..+.||+|++|++.... +....+. ......+..++..+.++|+|||+|++ ++++.....++..+..
T Consensus 115 ~---~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~-~~~~~~~~~~~~~l~~ 190 (259)
T 3lpm_A 115 I---PKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANF-VHRPERLLDIIDIMRK 190 (259)
T ss_dssp S---CTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEE-EECTTTHHHHHHHHHH
T ss_pred h---ccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEE-EEcHHHHHHHHHHHHH
Confidence 1 12678999999864332 1111111 11112345788899999999999999 7788888888888888
Q ss_pred cccceEEecCCCCCCCCcceeEEEeeccCCCCCCCCccchhhhcccC
Q 003302 175 LFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGS 221 (832)
Q Consensus 175 ~F~~V~~~KP~sSR~~SaEiyvVc~gfk~p~~id~~~ldp~~vf~~~ 221 (832)
+.-.+..+.|.+++..+...++++.+.++... ...+.+|+++++.-
T Consensus 191 ~~~~~~~~~~v~~~~~~~~~~~l~~~~k~~~~-~~~~~~~l~i~~~~ 236 (259)
T 3lpm_A 191 YRLEPKRIQFVHPRSDREANTVLVEGIKDGKP-GVKYVPPVIVYDEL 236 (259)
T ss_dssp TTEEEEEEEEEESSTTSCCSEEEEEEEETCCS-CCEEEEEEECBCTT
T ss_pred CCCceEEEEEeecCCCCCcEEEEEEEEeCCCC-CCeecCCEEEECCC
Confidence 75566667788899999899999999987654 57889999998753
No 17
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=99.54 E-value=1.5e-14 Score=151.80 Aligned_cols=140 Identities=17% Similarity=0.163 Sum_probs=115.2
Q ss_pred EcCCcCHHHHHHHHhCCCCCEEEEEeCCC---------CCCCCCceEE-EccCCChhHHHHHHHHHhhccCCcccEEEeC
Q 003302 49 LCAAPGGWMQVAVQRVPVGSLVLGLDLVP---------IAPIRGAVSL-EQDITKPECRARVKKVMEEHGVRAFDLVLHD 118 (832)
Q Consensus 49 LGcGPGg~sq~La~~~p~~~~ViGVDLsp---------~~~i~~V~~i-~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsD 118 (832)
-.+++|-+...+.+.- +..|+-|+-.- |.|+++++++ ++|++.+... +.+|+|++|
T Consensus 148 ~~~~~~~~~~~~~k~~--g~~vl~v~~~~~~p~k~v~wi~Pi~GAt~~~~lDfg~p~~~------------~k~DvV~SD 213 (320)
T 2hwk_A 148 NEHPQSDFSSFVSKLK--GRTVLVVGEKLSVPGKMVDWLSDRPEATFRARLDLGIPGDV------------PKYDIIFVN 213 (320)
T ss_dssp CCCCCCCCHHHHHTSS--CSEEEEEESCCCCTTSEEEEEESSTTCSEECCGGGCSCTTS------------CCEEEEEEE
T ss_pred hccCCCCHHHHHhhCC--CcEEEEEecccccCCceeEeeccCCCceeecccccCCcccc------------CcCCEEEEc
Confidence 3456676777777663 45777775221 2367888888 8899986532 567999999
Q ss_pred CCCCCCCCc-h--hHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCC--CHHHHHHHHHHcccceEEecCCCCCCCCcc
Q 003302 119 GSPNVGGAW-A--QEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQ--DYSSVLYCLKQLFEKVEVDKPAASRSASAE 193 (832)
Q Consensus 119 gapnv~g~w-~--~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~--d~~~ll~~L~~~F~~V~~~KP~sSR~~SaE 193 (832)
++|+..|++ . .||...+.| ++..|+.+|+|||+||+|+|... ....++..|.+.|..|.++||.+||. |+|
T Consensus 214 MApn~sGh~yqQC~DHarii~L---al~fA~~vLkPGGtfV~KvyggaDr~se~lv~~LaR~F~~Vr~vKP~ASR~-StE 289 (320)
T 2hwk_A 214 VRTPYKYHHYQQCEDHAIKLSM---LTKKACLHLNPGGTCVSIGYGYADRASESIIGAIARQFKFSRVCKPKSSLE-ETE 289 (320)
T ss_dssp CCCCCCSCHHHHHHHHHHHHHH---THHHHGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTEEEEEEECCTTCCS-TTC
T ss_pred CCCCCCCccccccchHHHHHHH---HHHHHHHhcCCCceEEEEEecCCcccHHHHHHHHHHhcceeeeeCCCCccc-cce
Confidence 999999998 5 677776665 88999999999999999999998 57889999999999999999999999 999
Q ss_pred eeEEEeeccCCCC
Q 003302 194 IYLLGIKYKAPAK 206 (832)
Q Consensus 194 iyvVc~gfk~p~~ 206 (832)
+|+|+.||+++..
T Consensus 290 vf~La~gf~g~~r 302 (320)
T 2hwk_A 290 VLFVFIGYDRKAR 302 (320)
T ss_dssp EEEEEEEECCCCC
T ss_pred EEEEEEeecCCcc
Confidence 9999999999643
No 18
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.51 E-value=3.7e-14 Score=149.33 Aligned_cols=173 Identities=17% Similarity=0.171 Sum_probs=116.0
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC--------------CCCC-CceEEEccCCChhHHHHHHHHH
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI--------------APIR-GAVSLEQDITKPECRARVKKVM 104 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~--------------~~i~-~V~~i~gDIt~~~~~~~l~~~L 104 (832)
+.++.+|||||||+|.++..++.+.+ ...|+|||+++. ..+. ++.++++|+.+.... .+...+
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~-~~~~~~ 111 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLE-KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKA-RVEAGL 111 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCT-TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHH-HHHTTC
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhh-hhhhcc
Confidence 45678999999999999999999976 579999999962 1222 388999999885210 000011
Q ss_pred hhccCCcccEEEeCCCCCCCC-CchhHHhHHh------HHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHHHHHccc
Q 003302 105 EEHGVRAFDLVLHDGSPNVGG-AWAQEAMSQN------ALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFE 177 (832)
Q Consensus 105 ~~~~~~~FDlVlsDgapnv~g-~w~~D~~~q~------~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~L~~~F~ 177 (832)
. .+.||+|++|++....+ ....+..... ..+..++..+.++|+|||+|++ +++......++..+...|.
T Consensus 112 ~---~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~-~~~~~~~~~~~~~l~~~~~ 187 (260)
T 2ozv_A 112 P---DEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSL-ISRPQSVAEIIAACGSRFG 187 (260)
T ss_dssp C---TTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEE-EECGGGHHHHHHHHTTTEE
T ss_pred C---CCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEE-EEcHHHHHHHHHHHHhcCC
Confidence 1 26789999997643321 1111111111 1135678889999999999998 7777777788888877777
Q ss_pred ceEEecCCCCCCCCcceeEEEeeccCCCCCCCCccchhhhccc
Q 003302 178 KVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQG 220 (832)
Q Consensus 178 ~V~~~KP~sSR~~SaEiyvVc~gfk~p~~id~~~ldp~~vf~~ 220 (832)
.+.+. +..++......+++..+.+++.. ...+++|++++++
T Consensus 188 ~~~i~-~v~~~~~~~~~~~lv~~~k~~~~-~~~~~~~l~i~~~ 228 (260)
T 2ozv_A 188 GLEIT-LIHPRPGEDAVRMLVTAIKGSRA-RLTFRAPLIMHET 228 (260)
T ss_dssp EEEEE-EEESSTTSCCCEEEEEEEETCCC-CCEECCCEESSCT
T ss_pred ceEEE-EEcCCCCCCceEEEEEEEeCCCC-CceecCCEEEECC
Confidence 66655 45556666666666677766544 4688899999864
No 19
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=99.47 E-value=1.1e-13 Score=152.68 Aligned_cols=89 Identities=26% Similarity=0.255 Sum_probs=75.0
Q ss_pred cCchhHHHHHHHhhhhhcC-------CCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCCC----CCCceEEE
Q 003302 20 HGYRSRASWKLVQLDSKFS-------FLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIAP----IRGAVSLE 88 (832)
Q Consensus 20 ~gyrsRaafKLiqi~~kf~-------fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~~----i~~V~~i~ 88 (832)
.++-|||+|||.++...|. +|.+|++||||||+|||||++|+++ ++.|+|||+.+|.+ .++|++++
T Consensus 182 ~~~pSRa~lKL~Ea~~~F~~~~~~~~~l~~G~~vlDLGAaPGGWT~~l~~r---g~~V~aVD~~~l~~~l~~~~~V~~~~ 258 (375)
T 4auk_A 182 ADAPSRSTLKLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKR---NMWVYSVDNGPMAQSLMDTGQVTWLR 258 (375)
T ss_dssp TTSSCTTHHHHHHHHHHHSCGGGHHHHSCTTCEEEEETCTTCHHHHHHHHT---TCEEEEECSSCCCHHHHTTTCEEEEC
T ss_pred CCCCCHHHHHHHHHHHhccchhhhhccCCCCCEEEEeCcCCCHHHHHHHHC---CCEEEEEEhhhcChhhccCCCeEEEe
Confidence 4577999999999887774 4789999999999999999999987 57999999999874 58999999
Q ss_pred ccCCChhHHHHHHHHHhhccCCcccEEEeCCCCC
Q 003302 89 QDITKPECRARVKKVMEEHGVRAFDLVLHDGSPN 122 (832)
Q Consensus 89 gDIt~~~~~~~l~~~L~~~~~~~FDlVlsDgapn 122 (832)
+|+..... . .+.||+|+||++++
T Consensus 259 ~d~~~~~~--------~---~~~~D~vvsDm~~~ 281 (375)
T 4auk_A 259 EDGFKFRP--------T---RSNISWMVCDMVEK 281 (375)
T ss_dssp SCTTTCCC--------C---SSCEEEEEECCSSC
T ss_pred CccccccC--------C---CCCcCEEEEcCCCC
Confidence 99877431 1 15789999999764
No 20
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.41 E-value=6e-13 Score=138.79 Aligned_cols=140 Identities=18% Similarity=0.209 Sum_probs=97.5
Q ss_pred CchhHHHHHHHhhhhhcCCCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC---------CCCCceEEEccC
Q 003302 21 GYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA---------PIRGAVSLEQDI 91 (832)
Q Consensus 21 gyrsRaafKLiqi~~kf~fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~---------~i~~V~~i~gDI 91 (832)
.|+++.+-.|++....+. +++|.+|||||||||+|+.+++..+++.+.|+|||+++.. ..+++.++++|+
T Consensus 56 ~~~skla~~ll~~l~~~~-l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da 134 (232)
T 3id6_C 56 AFRSKLAGAILKGLKTNP-IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADA 134 (232)
T ss_dssp TTTCHHHHHHHTTCSCCS-CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCT
T ss_pred hHHHHHHHHHHhhhhhcC-CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEccc
Confidence 467777777776554433 5789999999999999999999998878899999999821 236899999999
Q ss_pred CChhHHHHHHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCC---------
Q 003302 92 TKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRS--------- 162 (832)
Q Consensus 92 t~~~~~~~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs--------- 162 (832)
+.+.... ...+.||+|++|+++ .+.. ..++..+.++|+|||+|++.+...
T Consensus 135 ~~~~~~~--------~~~~~~D~I~~d~a~-------~~~~------~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~ 193 (232)
T 3id6_C 135 RFPQSYK--------SVVENVDVLYVDIAQ-------PDQT------DIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPK 193 (232)
T ss_dssp TCGGGTT--------TTCCCEEEEEECCCC-------TTHH------HHHHHHHHHHEEEEEEEEEEEC-------CCSS
T ss_pred ccchhhh--------ccccceEEEEecCCC-------hhHH------HHHHHHHHHhCCCCeEEEEEEccCCcccCCCHH
Confidence 8754211 012578999999763 1111 122345666999999999865322
Q ss_pred CCHHHHHHHHHHc-ccceEEe
Q 003302 163 QDYSSVLYCLKQL-FEKVEVD 182 (832)
Q Consensus 163 ~d~~~ll~~L~~~-F~~V~~~ 182 (832)
..+....+.|... |.-+..+
T Consensus 194 e~~~~~~~~L~~~gf~~~~~~ 214 (232)
T 3id6_C 194 EIYKTEVEKLENSNFETIQII 214 (232)
T ss_dssp SSTTHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEe
Confidence 1234556666653 6655544
No 21
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.25 E-value=1.4e-11 Score=132.41 Aligned_cols=157 Identities=18% Similarity=0.131 Sum_probs=104.2
Q ss_pred cCchhHHHHHHHhhhhhcCCCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCC-CCC-----CCCceEE-EccCC
Q 003302 20 HGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVP-IAP-----IRGAVSL-EQDIT 92 (832)
Q Consensus 20 ~gyrsRaafKLiqi~~kf~fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp-~~~-----i~~V~~i-~gDIt 92 (832)
..|.||++|||..+...|.+..++.+|||||||||+|+.+|++. + .+.|+|||+++ |.. .+++..+ ..|+.
T Consensus 63 ~~yvsrg~~Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~-g-a~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~ 140 (291)
T 3hp7_A 63 LRYVSRGGLKLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQN-G-AKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFR 140 (291)
T ss_dssp CCSSSTTHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEECSSSSCSCHHHHTCTTEEEECSCCGG
T ss_pred cccccchHHHHHHHHHhcCCCccccEEEecCCCccHHHHHHHhC-C-CCEEEEEECCHHHHHHHHHhCcccceecccCce
Confidence 46999999999999999998778899999999999999999886 2 46999999998 432 2455443 23554
Q ss_pred ChhHHHHHHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEE---cCCCC-----
Q 003302 93 KPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKV---FRSQD----- 164 (832)
Q Consensus 93 ~~~~~~~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KV---Frs~d----- 164 (832)
.... ..+. ...||+|++|.++. +. ..+|..+.++|+|||+||+.+ |....
T Consensus 141 ~l~~-----~~l~---~~~fD~v~~d~sf~-----sl---------~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~ 198 (291)
T 3hp7_A 141 YAEP-----VDFT---EGLPSFASIDVSFI-----SL---------NLILPALAKILVDGGQVVALVKPQFEAGREQIGK 198 (291)
T ss_dssp GCCG-----GGCT---TCCCSEEEECCSSS-----CG---------GGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-
T ss_pred ecch-----hhCC---CCCCCEEEEEeeHh-----hH---------HHHHHHHHHHcCcCCEEEEEECcccccChhhcCC
Confidence 3221 0111 13489999997532 11 245678899999999999963 32110
Q ss_pred -------------HHHHHHHHHHc-ccceEE-ecCCCCCCCCcceeEEEee
Q 003302 165 -------------YSSVLYCLKQL-FEKVEV-DKPAASRSASAEIYLLGIK 200 (832)
Q Consensus 165 -------------~~~ll~~L~~~-F~~V~~-~KP~sSR~~SaEiyvVc~g 200 (832)
...+...+... |.-..+ .-|.....++-|.++.+..
T Consensus 199 ~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~~spi~g~~gn~e~l~~~~~ 249 (291)
T 3hp7_A 199 NGIVRESSIHEKVLETVTAFAVDYGFSVKGLDFSPIQGGHGNIEFLAHLEK 249 (291)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEEECSSCCGGGCCCEEEEEEE
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCcCHHHHHHhhh
Confidence 01122233333 543333 3466666777787776643
No 22
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.24 E-value=1.3e-11 Score=133.71 Aligned_cols=125 Identities=16% Similarity=0.216 Sum_probs=90.4
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
+.++.+|||+|||||+++.+++..++..+.|+|+|+++.. .++++.++++|+++... +
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~-------~---- 184 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGE-------L---- 184 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGG-------G----
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhccc-------c----
Confidence 4678999999999999999999998767899999999721 34678999999987431 1
Q ss_pred CCcccEEEeCCCCCCCCCch----------hHH-hHHhHHHHHHHHHHHhhcccCcEEEEEEcC---CCCHHHHHHHHHH
Q 003302 109 VRAFDLVLHDGSPNVGGAWA----------QEA-MSQNALVIDSVKLATQFLAPKGTFVTKVFR---SQDYSSVLYCLKQ 174 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~----------~D~-~~q~~L~~~aLk~A~~~LkpGG~fV~KVFr---s~d~~~ll~~L~~ 174 (832)
.+.||+|++|+++...|.+. ... .....++..+|..+.++|+|||+||+.+.. ..+...+.+++..
T Consensus 185 ~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~ 264 (315)
T 1ixk_A 185 NVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDN 264 (315)
T ss_dssp CCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHH
T ss_pred cccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhc
Confidence 15789999998755444322 111 112344568889999999999999985542 3344445566665
Q ss_pred c
Q 003302 175 L 175 (832)
Q Consensus 175 ~ 175 (832)
+
T Consensus 265 ~ 265 (315)
T 1ixk_A 265 F 265 (315)
T ss_dssp S
T ss_pred C
Confidence 3
No 23
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.19 E-value=9.6e-11 Score=115.28 Aligned_cols=109 Identities=9% Similarity=0.086 Sum_probs=73.3
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
+.++.+|||||||+|.++..++.. ++.|+|||+++.. .++++.++++++.... ...
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~----------~~~ 86 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLD----------HYV 86 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGG----------GTC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHH----------hhc
Confidence 578999999999999999999987 5799999999721 3467888887776532 111
Q ss_pred CCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCC
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQ 163 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~ 163 (832)
.++||+|+++......+. ............+|..+.++|+|||+|++.+|.+.
T Consensus 87 ~~~fD~v~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 139 (185)
T 3mti_A 87 REPIRAAIFNLGYLPSAD--KSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGH 139 (185)
T ss_dssp CSCEEEEEEEEC-------------CHHHHHHHHHHHHHHEEEEEEEEEEEC---
T ss_pred cCCcCEEEEeCCCCCCcc--hhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCC
Confidence 267999999842110000 00001112235678899999999999999887643
No 24
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.19 E-value=3.9e-11 Score=137.45 Aligned_cols=124 Identities=20% Similarity=0.249 Sum_probs=91.1
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
+|.+|||||||||+++.+++..++..+.|+|+|+++.. .+.+|.++++|++.... .+ .+
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~------~~----~~ 186 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGA------AV----PE 186 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHH------HS----TT
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhh------hc----cc
Confidence 88999999999999999999998777899999999721 35678999999987431 01 15
Q ss_pred cccEEEeCCCCCCCCC----------chhHHh-HHhHHHHHHHHHHHhhcccCcEEEEEEc---CCCCHHHHHHHHHHc
Q 003302 111 AFDLVLHDGSPNVGGA----------WAQEAM-SQNALVIDSVKLATQFLAPKGTFVTKVF---RSQDYSSVLYCLKQL 175 (832)
Q Consensus 111 ~FDlVlsDgapnv~g~----------w~~D~~-~q~~L~~~aLk~A~~~LkpGG~fV~KVF---rs~d~~~ll~~L~~~ 175 (832)
.||+|++|+++...|. |..... ....++..+|..|.++|+|||+||+.+. ...+...+.+++..+
T Consensus 187 ~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~Ene~vv~~~l~~~ 265 (479)
T 2frx_A 187 MFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKETY 265 (479)
T ss_dssp CEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSSTTTHHHHHHHHHHS
T ss_pred cCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcccCHHHHHHHHHHC
Confidence 7899999987643333 222221 2234567889999999999999998653 334444556777765
No 25
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.19 E-value=2.1e-11 Score=138.72 Aligned_cols=126 Identities=17% Similarity=0.257 Sum_probs=91.1
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
+++|.+|||||||||+++.+++..++..+.|+|||+++.. .+.+|.++++|+.... ..+
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~------~~~---- 172 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELV------PHF---- 172 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHH------HHH----
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhh------hhc----
Confidence 4678999999999999999999998877899999999721 3567888888876532 112
Q ss_pred CCcccEEEeCCCCCCCCCchhHH----------h-HHhHHHHHHHHHHHhhcccCcEEEEEEc---CCCCHHHHHHHHHH
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQEA----------M-SQNALVIDSVKLATQFLAPKGTFVTKVF---RSQDYSSVLYCLKQ 174 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~D~----------~-~q~~L~~~aLk~A~~~LkpGG~fV~KVF---rs~d~~~ll~~L~~ 174 (832)
.+.||+|++|+++...|.+..++ . ....++..+|..|.++|+|||+||+.+. ...+...+.+++..
T Consensus 173 ~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEne~vv~~~l~~ 252 (456)
T 3m4x_A 173 SGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENEEIISWLVEN 252 (456)
T ss_dssp TTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGTHHHHHHHHHH
T ss_pred cccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccCHHHHHHHHHh
Confidence 16789999998765555432211 1 1224556889999999999999997433 33455556677776
Q ss_pred c
Q 003302 175 L 175 (832)
Q Consensus 175 ~ 175 (832)
+
T Consensus 253 ~ 253 (456)
T 3m4x_A 253 Y 253 (456)
T ss_dssp S
T ss_pred C
Confidence 5
No 26
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.19 E-value=2.8e-11 Score=128.25 Aligned_cols=129 Identities=17% Similarity=0.253 Sum_probs=86.8
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
+.+|.+|||+|||||+++.+++..++..+.|+|||+++.. .++++.++++|++.... .+.. .
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~------~~~~-~ 153 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKD------YLLK-N 153 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHH------HHHH-T
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcch------hhhh-c
Confidence 3678999999999999999999988755899999999721 34578999999875421 1100 1
Q ss_pred CCcccEEEeCCCCCCCCCc------hhHHhH-HhHHHHHHHHHHHhhcccCcEEEEEEc---CCCCHHHHHHHHHHc
Q 003302 109 VRAFDLVLHDGSPNVGGAW------AQEAMS-QNALVIDSVKLATQFLAPKGTFVTKVF---RSQDYSSVLYCLKQL 175 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w------~~D~~~-q~~L~~~aLk~A~~~LkpGG~fV~KVF---rs~d~~~ll~~L~~~ 175 (832)
.+.||+|++|+++...|.+ ...... ...++..+|..+.++|+|||+||+.+. ...+...+.+.+..+
T Consensus 154 ~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~~l~~~ 230 (274)
T 3ajd_A 154 EIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKYILQKR 230 (274)
T ss_dssp TCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHHHHHHC
T ss_pred cccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHHHHHhC
Confidence 2678999999875543432 222211 113346778899999999999998653 234444455666554
No 27
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.18 E-value=1.2e-10 Score=122.80 Aligned_cols=143 Identities=17% Similarity=0.167 Sum_probs=99.9
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
.++.+|||+|||+|.++..++..+| ...|+|||+++.. .++++.++++|+.+.. . .
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~---------~---~ 174 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERP-DCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSAL---------A---G 174 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCT-TSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGG---------T---T
T ss_pred cCCCEEEEecCCccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhc---------c---c
Confidence 4678999999999999999998876 6799999999721 3457999999997631 1 1
Q ss_pred CcccEEEeCCCCCCCCCch-------hHH-------hHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHHHHHc
Q 003302 110 RAFDLVLHDGSPNVGGAWA-------QEA-------MSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL 175 (832)
Q Consensus 110 ~~FDlVlsDgapnv~g~w~-------~D~-------~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~L~~~ 175 (832)
+.||+|+++++....+... .++ .........++..+.++|+|||+|++.+ .......+...+...
T Consensus 175 ~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~-~~~~~~~~~~~l~~~ 253 (276)
T 2b3t_A 175 QQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH-GWQQGEAVRQAFILA 253 (276)
T ss_dssp CCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC-CSSCHHHHHHHHHHT
T ss_pred CCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE-CchHHHHHHHHHHHC
Confidence 6789999997533211100 000 0011334677888999999999999843 444456676777655
Q ss_pred -ccceEEecCCCCCCCCcceeEEEeec
Q 003302 176 -FEKVEVDKPAASRSASAEIYLLGIKY 201 (832)
Q Consensus 176 -F~~V~~~KP~sSR~~SaEiyvVc~gf 201 (832)
|..+.+.+..+.+ .++++++.|
T Consensus 254 Gf~~v~~~~d~~g~----~r~~~~~~~ 276 (276)
T 2b3t_A 254 GYHDVETCRDYGDN----ERVTLGRYY 276 (276)
T ss_dssp TCTTCCEEECTTSS----EEEEEEECC
T ss_pred CCcEEEEEecCCCC----CcEEEEEEC
Confidence 8888888776655 477777644
No 28
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.17 E-value=2.2e-11 Score=138.77 Aligned_cols=125 Identities=21% Similarity=0.194 Sum_probs=90.0
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
+.+|.+|||||||||+++.+++..++..+.|+|||+++.. .+. |.++++|++... ..+
T Consensus 99 ~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~------~~~---- 167 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALA------EAF---- 167 (464)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHH------HHH----
T ss_pred cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhh------hhc----
Confidence 4678999999999999999999999877899999999721 345 888888876532 111
Q ss_pred CCcccEEEeCCCCCCCCCch----------hHHh-HHhHHHHHHHHHHHhhcccCcEEEEEEc---CCCCHHHHHHHHHH
Q 003302 109 VRAFDLVLHDGSPNVGGAWA----------QEAM-SQNALVIDSVKLATQFLAPKGTFVTKVF---RSQDYSSVLYCLKQ 174 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~----------~D~~-~q~~L~~~aLk~A~~~LkpGG~fV~KVF---rs~d~~~ll~~L~~ 174 (832)
.+.||+|++|+++...|.+. .+.. ....++..+|..|.++|+|||+||+.+. ...+...+.+++..
T Consensus 168 ~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~eEne~vv~~~l~~ 247 (464)
T 3m6w_A 168 GTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPEENEGVVAHFLKA 247 (464)
T ss_dssp CSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHH
T ss_pred cccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCchhcCHHHHHHHHHH
Confidence 16789999998765434321 1111 2234567889999999999999997443 33455556677776
Q ss_pred c
Q 003302 175 L 175 (832)
Q Consensus 175 ~ 175 (832)
+
T Consensus 248 ~ 248 (464)
T 3m6w_A 248 H 248 (464)
T ss_dssp C
T ss_pred C
Confidence 5
No 29
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.17 E-value=7.9e-11 Score=117.07 Aligned_cols=152 Identities=14% Similarity=0.097 Sum_probs=96.4
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CC-CCceEEEccCCChhHHHHHHHHHhhc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PI-RGAVSLEQDITKPECRARVKKVMEEH 107 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i-~~V~~i~gDIt~~~~~~~l~~~L~~~ 107 (832)
+.++.+|||||||+|.++..++..+++.+.|+|||+++.. .+ +++.++++|+.+... .
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----------~ 89 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDK----------Y 89 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGG----------T
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhh----------h
Confidence 4688999999999999999999987656799999999721 22 578999999876431 1
Q ss_pred cCCcccEEEeCCCCCCCC-CchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCC-----HHHHHHHHHHcc---cc
Q 003302 108 GVRAFDLVLHDGSPNVGG-AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQD-----YSSVLYCLKQLF---EK 178 (832)
Q Consensus 108 ~~~~FDlVlsDgapnv~g-~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d-----~~~ll~~L~~~F---~~ 178 (832)
..+.||+|+++++....+ .+.... ......++..+.++|+|||+|++.+|.+.. ...+...+..+- -.
T Consensus 90 ~~~~fD~v~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 166 (197)
T 3eey_A 90 IDCPVKAVMFNLGYLPSGDHSISTR---PETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFI 166 (197)
T ss_dssp CCSCEEEEEEEESBCTTSCTTCBCC---HHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEE
T ss_pred ccCCceEEEEcCCcccCcccccccC---cccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEE
Confidence 126789999996431111 111111 112345788999999999999998765431 122222222221 12
Q ss_pred eEEecCCCCCCCCcceeEEEeeccCCC
Q 003302 179 VEVDKPAASRSASAEIYLLGIKYKAPA 205 (832)
Q Consensus 179 V~~~KP~sSR~~SaEiyvVc~gfk~p~ 205 (832)
+..+.. ..+...+..++|+++...|.
T Consensus 167 v~~~~~-~~~~~~pp~~~~~~~~~~~~ 192 (197)
T 3eey_A 167 VQRTDF-INQANCPPILVCIEKISEGH 192 (197)
T ss_dssp EEEEEE-TTCCSCCCEEEEEEECCSSC
T ss_pred EEEEEe-ccCccCCCeEEEEEEccccc
Confidence 222222 23445667777777766553
No 30
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.16 E-value=9.3e-11 Score=116.76 Aligned_cols=151 Identities=14% Similarity=0.012 Sum_probs=90.6
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-CC-----CC----CceEEEccCCChhHHHHHHHHHhhccC
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-AP-----IR----GAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-~~-----i~----~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
..++.+|||+|||+|.++..++...+ ++.|+|||+++. .. +. ++.++++|+.++ +.... ...
T Consensus 28 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~-----~~~~~--~~~ 99 (215)
T 4dzr_A 28 MPSGTRVIDVGTGSGCIAVSIALACP-GVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEW-----LIERA--ERG 99 (215)
T ss_dssp CCTTEEEEEEESSBCHHHHHHHHHCT-TEEEEEEECC-------------------CCHHHHHHH-----HHHHH--HTT
T ss_pred cCCCCEEEEecCCHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhh-----hhhhh--hcc
Confidence 36788999999999999999999875 679999999973 21 11 355566665541 11100 012
Q ss_pred CcccEEEeCCCCCCCCCchh-H-Hh-------------HHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHHHH-
Q 003302 110 RAFDLVLHDGSPNVGGAWAQ-E-AM-------------SQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLK- 173 (832)
Q Consensus 110 ~~FDlVlsDgapnv~g~w~~-D-~~-------------~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~L~- 173 (832)
+.||+|++|++......+.. . .. ........++..+.++|+|||+|++..+.......+...+.
T Consensus 100 ~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~ 179 (215)
T 4dzr_A 100 RPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHNQADEVARLFAP 179 (215)
T ss_dssp CCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTTSCHHHHHHHTGG
T ss_pred CcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECCccHHHHHHHHHH
Confidence 67899999986433221110 0 00 00112256778889999999995444555555666666665
Q ss_pred --HcccceEEecCCCCCCCCcceeEEEeecc
Q 003302 174 --QLFEKVEVDKPAASRSASAEIYLLGIKYK 202 (832)
Q Consensus 174 --~~F~~V~~~KP~sSR~~SaEiyvVc~gfk 202 (832)
..|..+.+++....+ ..++++....
T Consensus 180 ~~~gf~~~~~~~~~~~~----~r~~~~~~~~ 206 (215)
T 4dzr_A 180 WRERGFRVRKVKDLRGI----DRVIAVTREP 206 (215)
T ss_dssp GGGGTEECCEEECTTSC----EEEEEEEECC
T ss_pred hhcCCceEEEEEecCCC----EEEEEEEEcC
Confidence 347777777665544 5666665443
No 31
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.16 E-value=1e-10 Score=123.55 Aligned_cols=101 Identities=16% Similarity=0.161 Sum_probs=76.0
Q ss_pred CCCCCCEEEEEcCCcCHHHHHHHHhCC-CCCEEEEEeCCC-CC-----------CCCCceEEEccCCChhHHHHHHHHHh
Q 003302 39 FLRSSHAVLDLCAAPGGWMQVAVQRVP-VGSLVLGLDLVP-IA-----------PIRGAVSLEQDITKPECRARVKKVME 105 (832)
Q Consensus 39 fl~~g~~VLDLGcGPGg~sq~La~~~p-~~~~ViGVDLsp-~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~ 105 (832)
++++|.+|||||||+|.++..+++..+ +++.|+|||+++ |. ...+|.++++|+++.+
T Consensus 67 ~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~---------- 136 (261)
T 4gek_A 67 FVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIA---------- 136 (261)
T ss_dssp HCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCC----------
T ss_pred hCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccc----------
Confidence 368999999999999999999998864 466999999997 21 1246899999998743
Q ss_pred hccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcC
Q 003302 106 EHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFR 161 (832)
Q Consensus 106 ~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFr 161 (832)
...||+|++.... +|..+. -...+|+.+.++|+|||+|++..+.
T Consensus 137 ---~~~~d~v~~~~~l----~~~~~~-----~~~~~l~~i~~~LkpGG~lii~e~~ 180 (261)
T 4gek_A 137 ---IENASMVVLNFTL----QFLEPS-----ERQALLDKIYQGLNPGGALVLSEKF 180 (261)
T ss_dssp ---CCSEEEEEEESCG----GGSCHH-----HHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred ---ccccccceeeeee----eecCch-----hHhHHHHHHHHHcCCCcEEEEEecc
Confidence 2568999997531 222221 1245788999999999999986443
No 32
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.16 E-value=1e-10 Score=122.01 Aligned_cols=99 Identities=19% Similarity=0.212 Sum_probs=78.4
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCC-C--------CCCCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVP-I--------APIRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp-~--------~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
++||.+|||||||+|.++.++|..+++.++|+|||+++ | ...+|+.++.+|+.++... . ....
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~-------~-~~~~ 146 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKY-------R-HLVE 146 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGG-------T-TTCC
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCcccc-------c-cccc
Confidence 68999999999999999999999998899999999997 2 1357899999999886421 1 1236
Q ss_pred cccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEE
Q 003302 111 AFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKV 159 (832)
Q Consensus 111 ~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KV 159 (832)
.||+|+++.+. .|. ...++..+.++|+|||.|++.+
T Consensus 147 ~vDvVf~d~~~----~~~---------~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 147 GVDGLYADVAQ----PEQ---------AAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp CEEEEEECCCC----TTH---------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEEEEeccC----Chh---------HHHHHHHHHHhccCCCEEEEEE
Confidence 78999998531 111 1346778999999999999854
No 33
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.12 E-value=1.6e-10 Score=112.94 Aligned_cols=117 Identities=14% Similarity=0.144 Sum_probs=89.7
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCCC--ceEEEccCCChhHHHHHHHHHhhc
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIRG--AVSLEQDITKPECRARVKKVMEEH 107 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~~--V~~i~gDIt~~~~~~~l~~~L~~~ 107 (832)
.++.+|||+|||+|.++..++.. +..|+|+|+++.. .+++ +.++++|+.+.. .
T Consensus 51 ~~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~---------~-- 116 (194)
T 1dus_A 51 DKDDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV---------K-- 116 (194)
T ss_dssp CTTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC---------T--
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhccc---------c--
Confidence 47889999999999999999887 5699999999721 3455 899999998732 1
Q ss_pred cCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHHHHHcccceEEe
Q 003302 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVD 182 (832)
Q Consensus 108 ~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~L~~~F~~V~~~ 182 (832)
.+.||+|+++++.. |.. .....++..+.++|+|||+|++.++.......+...|...|..+.++
T Consensus 117 -~~~~D~v~~~~~~~----~~~------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 180 (194)
T 1dus_A 117 -DRKYNKIITNPPIR----AGK------EVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDVFGNVETV 180 (194)
T ss_dssp -TSCEEEEEECCCST----TCH------HHHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHHHHHHHHHSCCEEE
T ss_pred -cCCceEEEECCCcc----cch------hHHHHHHHHHHHHcCCCCEEEEEECCCCChHHHHHHHHHHhcceEEE
Confidence 16789999986422 211 12346778889999999999997777666566788888888888876
No 34
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.11 E-value=9.8e-11 Score=123.60 Aligned_cols=139 Identities=12% Similarity=0.068 Sum_probs=85.5
Q ss_pred CchHHHHHHhc-CchhHHHHHHHhhhhhcCCCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCC-C----CCCCC
Q 003302 10 LDKYYRLAKEH-GYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVP-I----APIRG 83 (832)
Q Consensus 10 ~D~yy~~Ake~-gyrsRaafKLiqi~~kf~fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp-~----~~i~~ 83 (832)
.|+|...|... -||....-.|++....+ ...+.+|||||||+|.++..|+.. ...|+|||+++ | ...++
T Consensus 8 ~d~F~~~a~~Y~~~Rp~yp~~l~~~l~~~--~~~~~~vLDvGcGtG~~~~~l~~~---~~~v~gvD~s~~ml~~a~~~~~ 82 (257)
T 4hg2_A 8 KDHFTPVADAYRAFRPRYPRALFRWLGEV--APARGDALDCGCGSGQASLGLAEF---FERVHAVDPGEAQIRQALRHPR 82 (257)
T ss_dssp ------------CCCCCCCHHHHHHHHHH--SSCSSEEEEESCTTTTTHHHHHTT---CSEEEEEESCHHHHHTCCCCTT
T ss_pred HHHHHHHHHHHHHHCCCcHHHHHHHHHHh--cCCCCCEEEEcCCCCHHHHHHHHh---CCEEEEEeCcHHhhhhhhhcCC
Confidence 46666655432 23432111233322222 245678999999999999999876 45899999997 2 24678
Q ss_pred ceEEEccCCChhHHHHHHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCC
Q 003302 84 AVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQ 163 (832)
Q Consensus 84 V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~ 163 (832)
|.++++|+.+.+ +. .++||+|+|..+. +|. +. ..++..+.++|+|||+|++-.+...
T Consensus 83 v~~~~~~~e~~~--------~~---~~sfD~v~~~~~~----h~~-~~-------~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 83 VTYAVAPAEDTG--------LP---PASVDVAIAAQAM----HWF-DL-------DRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp EEEEECCTTCCC--------CC---SSCEEEEEECSCC----TTC-CH-------HHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred ceeehhhhhhhc--------cc---CCcccEEEEeeeh----hHh-hH-------HHHHHHHHHHcCCCCEEEEEECCCC
Confidence 999999998754 22 2789999997653 343 21 2467789999999999998666443
Q ss_pred C-HHHHHHHHHHcc
Q 003302 164 D-YSSVLYCLKQLF 176 (832)
Q Consensus 164 d-~~~ll~~L~~~F 176 (832)
. ...+..++.+++
T Consensus 140 ~~~~~~~~~~~~~~ 153 (257)
T 4hg2_A 140 RVDPEVDAVVDRLY 153 (257)
T ss_dssp BCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 2 244445555544
No 35
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.11 E-value=3.2e-10 Score=115.35 Aligned_cols=135 Identities=11% Similarity=-0.013 Sum_probs=88.9
Q ss_pred CCCCCCEEEEEcCC-cCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhh
Q 003302 39 FLRSSHAVLDLCAA-PGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEE 106 (832)
Q Consensus 39 fl~~g~~VLDLGcG-PGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~ 106 (832)
++.++.+||||||| +|.++..++... ++.|+|||+++.. .+ ++.++++|+..... +.
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~-------~~- 120 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNS-NVRLVKSNGGIIKG-------VV- 120 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTC-CCEEEECSSCSSTT-------TC-
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCC-CcEEEeCCchhhhh-------cc-
Confidence 35788999999999 999999999875 5699999999721 23 78999999754321 11
Q ss_pred ccCCcccEEEeCCCCCCCCCchh-HHh-------HHhHHHHHHHHHHHhhcccCcEEEEEEcCC-CCHHHHHHHHHHccc
Q 003302 107 HGVRAFDLVLHDGSPNVGGAWAQ-EAM-------SQNALVIDSVKLATQFLAPKGTFVTKVFRS-QDYSSVLYCLKQLFE 177 (832)
Q Consensus 107 ~~~~~FDlVlsDgapnv~g~w~~-D~~-------~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs-~d~~~ll~~L~~~F~ 177 (832)
.+.||+|++|++......... ... ....+...++..+.++|+|||+|++.+... .....+...+..+.-
T Consensus 121 --~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~l~~~g~ 198 (230)
T 3evz_A 121 --EGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEKLLNVIKERGIKLGY 198 (230)
T ss_dssp --CSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred --cCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHhHHHHHHHHHHHcCC
Confidence 267899999976432111000 000 011223577889999999999999854333 234566677776644
Q ss_pred ceEEecCCC
Q 003302 178 KVEVDKPAA 186 (832)
Q Consensus 178 ~V~~~KP~s 186 (832)
.+..+....
T Consensus 199 ~~~~~~~~~ 207 (230)
T 3evz_A 199 SVKDIKFKV 207 (230)
T ss_dssp EEEEEEECC
T ss_pred ceEEEEecC
Confidence 666655433
No 36
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.10 E-value=1e-10 Score=132.84 Aligned_cols=127 Identities=19% Similarity=0.260 Sum_probs=90.4
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
+.+|.+|||+|||||+++.+++..++..+.|+|+|+++.. .+++|.++++|++.... .+.
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~------~~~--- 327 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPE------IIG--- 327 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSS------SSC---
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcch------hhc---
Confidence 4678999999999999999999998755899999999721 35678999999987421 011
Q ss_pred CCcccEEEeCCCCCCCCCchh--H---------HhHHhHHHHHHHHHHHhhcccCcEEEEEEcC---CCCHHHHHHHHHH
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQ--E---------AMSQNALVIDSVKLATQFLAPKGTFVTKVFR---SQDYSSVLYCLKQ 174 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~--D---------~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFr---s~d~~~ll~~L~~ 174 (832)
.+.||+|++|+++...|.+.. + ......++..+|..+..+|+|||+||+.++. ..+...+.+.+..
T Consensus 328 ~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~~v~~~l~~ 407 (450)
T 2yxl_A 328 EEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRWFLNV 407 (450)
T ss_dssp SSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHH
T ss_pred cCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHHHHHHHHHh
Confidence 156899999987655444221 1 1112234467889999999999999975543 3344455666666
Q ss_pred c
Q 003302 175 L 175 (832)
Q Consensus 175 ~ 175 (832)
+
T Consensus 408 ~ 408 (450)
T 2yxl_A 408 H 408 (450)
T ss_dssp C
T ss_pred C
Confidence 4
No 37
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.09 E-value=1.7e-10 Score=117.66 Aligned_cols=98 Identities=24% Similarity=0.221 Sum_probs=73.5
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----C----CCCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----A----PIRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----~----~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
+.+|.+|||||||||.++..++..++ .+.|+|||+++. . ..+++.++++|++.+... .. ..+
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~-------~~-~~~ 125 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKY-------SG-IVE 125 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGT-------TT-TCC
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhh-------cc-ccc
Confidence 46889999999999999999999987 679999999972 1 235788899999874210 00 116
Q ss_pred cccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEE
Q 003302 111 AFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKV 159 (832)
Q Consensus 111 ~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KV 159 (832)
.||+|+++.+. .+. ...++..+.++|+|||+|++.+
T Consensus 126 ~fD~V~~~~~~-------~~~------~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 126 KVDLIYQDIAQ-------KNQ------IEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp CEEEEEECCCS-------TTH------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceeEEEEeccC-------hhH------HHHHHHHHHHHhCCCCEEEEEE
Confidence 78999998421 111 1234678899999999999964
No 38
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.08 E-value=1.3e-10 Score=126.02 Aligned_cols=127 Identities=17% Similarity=0.133 Sum_probs=86.4
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
+++|.+|||+|||||+++.+++..++..+.|+|+|+++.. .+.+|.++++|++..... .. .
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~------~~--~ 171 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPS------DP--R 171 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTT------CG--G
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCcc------cc--c
Confidence 4678999999999999999999988767899999999721 356789999998764210 00 0
Q ss_pred CCcccEEEeCCCCCCCCCchh--HH-----------hHHhHHHHHHHHHHHhhcccCcEEEEEE---cCCCCHHHHHHHH
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQ--EA-----------MSQNALVIDSVKLATQFLAPKGTFVTKV---FRSQDYSSVLYCL 172 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~--D~-----------~~q~~L~~~aLk~A~~~LkpGG~fV~KV---Frs~d~~~ll~~L 172 (832)
...||+|++|+++...|.+.. +. .....++..+|..|..+|+ ||+||+.+ +...+...+.+.|
T Consensus 172 ~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~~Ene~~v~~~l 250 (309)
T 2b9e_A 172 YHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQEENEDVVRDAL 250 (309)
T ss_dssp GTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCGGGTHHHHHHHH
T ss_pred cCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCChHHhHHHHHHHH
Confidence 146899999987765554322 21 1122445677888888886 99999753 3445555566666
Q ss_pred HHc
Q 003302 173 KQL 175 (832)
Q Consensus 173 ~~~ 175 (832)
..+
T Consensus 251 ~~~ 253 (309)
T 2b9e_A 251 QQN 253 (309)
T ss_dssp TTS
T ss_pred HhC
Confidence 654
No 39
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.08 E-value=2.5e-10 Score=114.40 Aligned_cols=116 Identities=17% Similarity=0.219 Sum_probs=85.8
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
+.++.+|||||||+|.++..++...| .+.|+|||+++.. .++++.++++|+.... ..
T Consensus 38 ~~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~---------~~-- 105 (204)
T 3e05_A 38 LQDDLVMWDIGAGSASVSIEASNLMP-NGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGL---------DD-- 105 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHCT-TSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTC---------TT--
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhh---------hc--
Confidence 46789999999999999999999865 6799999999721 3467999999986531 11
Q ss_pred CCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHHHHHc-ccceEEe
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL-FEKVEVD 182 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~L~~~-F~~V~~~ 182 (832)
...||+|+++++.. ....++..+.++|+|||+|++..+.......+...+... | .+.+.
T Consensus 106 ~~~~D~i~~~~~~~--------------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g~-~~~~~ 165 (204)
T 3e05_A 106 LPDPDRVFIGGSGG--------------MLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGY-MVEVA 165 (204)
T ss_dssp SCCCSEEEESCCTT--------------CHHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHTTC-EEEEE
T ss_pred CCCCCEEEECCCCc--------------CHHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHCCC-ceeEE
Confidence 15689999987531 123567789999999999999766555555666666655 5 55544
No 40
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.07 E-value=1.9e-10 Score=118.02 Aligned_cols=119 Identities=18% Similarity=0.193 Sum_probs=85.9
Q ss_pred CchhHHHHHHHhhhhhcCCCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----C----CCCCceEEEccC
Q 003302 21 GYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----A----PIRGAVSLEQDI 91 (832)
Q Consensus 21 gyrsRaafKLiqi~~kf~fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----~----~i~~V~~i~gDI 91 (832)
.++++.+..+......+. +.++.+|||||||+|.++..++...++.+.|+|||+++. . ..+++.++++|+
T Consensus 57 ~~~~~~~~~~~~~l~~~~-~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~ 135 (233)
T 2ipx_A 57 PFRSKLAAAILGGVDQIH-IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDA 135 (233)
T ss_dssp TTTCHHHHHHHTTCSCCC-CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCT
T ss_pred ccchhHHHHHHhHHheec-CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEccc
Confidence 467787777776444443 567899999999999999999998755679999999952 1 126899999999
Q ss_pred CChhHHHHHHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcC
Q 003302 92 TKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFR 161 (832)
Q Consensus 92 t~~~~~~~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFr 161 (832)
.+... +.. ..+.||+|+++.+ . .+. ...++..+.++|+|||+|++.++.
T Consensus 136 ~~~~~-------~~~-~~~~~D~V~~~~~----~---~~~------~~~~~~~~~~~LkpgG~l~i~~~~ 184 (233)
T 2ipx_A 136 RHPHK-------YRM-LIAMVDVIFADVA----Q---PDQ------TRIVALNAHTFLRNGGHFVISIKA 184 (233)
T ss_dssp TCGGG-------GGG-GCCCEEEEEECCC----C---TTH------HHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred CChhh-------hcc-cCCcEEEEEEcCC----C---ccH------HHHHHHHHHHHcCCCeEEEEEEcc
Confidence 87431 111 1267899999864 1 111 123456689999999999996653
No 41
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.07 E-value=7.7e-11 Score=124.92 Aligned_cols=137 Identities=12% Similarity=0.068 Sum_probs=99.2
Q ss_pred CCCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----------CCCCCceEEEccCCChhHHHHHHHHHhh
Q 003302 38 SFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----------APIRGAVSLEQDITKPECRARVKKVMEE 106 (832)
Q Consensus 38 ~fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----------~~i~~V~~i~gDIt~~~~~~~l~~~L~~ 106 (832)
..+.++.+|||||||+|.|+..++...+ .+.|+|||+++. ..+.++.++++|+.+.. .
T Consensus 115 ~~~~~~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~-~--------- 183 (272)
T 3a27_A 115 FISNENEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVE-L--------- 183 (272)
T ss_dssp TSCCTTCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCC-C---------
T ss_pred HhcCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcC-c---------
Confidence 3467889999999999999999999875 579999999962 23567899999998641 0
Q ss_pred ccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCC-----CCHHHHHHHHHHc-ccceE
Q 003302 107 HGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRS-----QDYSSVLYCLKQL-FEKVE 180 (832)
Q Consensus 107 ~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs-----~d~~~ll~~L~~~-F~~V~ 180 (832)
...||+|++|++.. . ...+..+.++|+|||+|++..+.. .....++..+... ...+.
T Consensus 184 --~~~~D~Vi~d~p~~------~---------~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (272)
T 3a27_A 184 --KDVADRVIMGYVHK------T---------HKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNGYKLI 246 (272)
T ss_dssp --TTCEEEEEECCCSS------G---------GGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHHTTEEEE
T ss_pred --cCCceEEEECCccc------H---------HHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHHHhCCeeE
Confidence 15789999997631 1 124556789999999999877654 2334445555543 34566
Q ss_pred EecCCCCCCCCcceeEEEeecc
Q 003302 181 VDKPAASRSASAEIYLLGIKYK 202 (832)
Q Consensus 181 ~~KP~sSR~~SaEiyvVc~gfk 202 (832)
+..+...|..+...|.+|..|+
T Consensus 247 ~~~~~~v~~~~p~~~~~~~d~~ 268 (272)
T 3a27_A 247 DYEVRKIKKYAPGVWHVVVDAK 268 (272)
T ss_dssp EEEEEEEEEEETTEEEEEEEEE
T ss_pred EeEEEEEEEECCCCCEEEEEEE
Confidence 6656666666667888888776
No 42
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.07 E-value=9e-10 Score=124.13 Aligned_cols=124 Identities=22% Similarity=0.280 Sum_probs=88.4
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
.++.+|||+|||||+++.+++..++. +.|+|+|+++.. .+ ++.++++|++.... .+..
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~~-~~v~a~D~~~~~l~~~~~~~~~~g~-~~~~~~~D~~~~~~------~~~~--- 313 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGM-KATVKQGDGRYPSQ------WCGE--- 313 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCTT-CEEEEEESSTTTHHHHHHHHHHTTC-CCEEEECCTTCTHH------HHTT---
T ss_pred CCcCeEEEECCCchHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHHcCC-CeEEEeCchhhchh------hccc---
Confidence 67899999999999999999999874 899999999842 12 47889999987531 1222
Q ss_pred CcccEEEeCCCCCCCCCchh--H---------HhHHhHHHHHHHHHHHhhcccCcEEEEEEc---CCCCHHHHHHHHHHc
Q 003302 110 RAFDLVLHDGSPNVGGAWAQ--E---------AMSQNALVIDSVKLATQFLAPKGTFVTKVF---RSQDYSSVLYCLKQL 175 (832)
Q Consensus 110 ~~FDlVlsDgapnv~g~w~~--D---------~~~q~~L~~~aLk~A~~~LkpGG~fV~KVF---rs~d~~~ll~~L~~~ 175 (832)
+.||+|++|+++...|.+.. + ......++..+|..+.++|+|||+||+.+. ...+...+.+.+..+
T Consensus 314 ~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~ene~~v~~~l~~~ 393 (429)
T 1sqg_A 314 QQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRT 393 (429)
T ss_dssp CCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGTHHHHHHHHHHC
T ss_pred CCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChhhHHHHHHHHHHhC
Confidence 57899999987654443211 1 111224456788999999999999998653 333444455666654
No 43
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.04 E-value=1.9e-09 Score=105.42 Aligned_cols=127 Identities=18% Similarity=0.182 Sum_probs=90.1
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC------CCCCceEEEccCCChhHHHHHHHHHhhccCCccc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA------PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFD 113 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FD 113 (832)
+.++.+|||+|||+|.++..++.. +..|+|||+++.. ..+++.++++|+.+.. +. .+.||
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~--------~~---~~~~D 109 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQ--------IS---ETDFD 109 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSC--------CC---CCCEE
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC---CCcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCC--------CC---CCcee
Confidence 568899999999999999999886 4699999999721 2467899999998743 11 26789
Q ss_pred EEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCC--CHHHHHHHHHHc-ccceEEecCCCCC
Q 003302 114 LVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQ--DYSSVLYCLKQL-FEKVEVDKPAASR 188 (832)
Q Consensus 114 lVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~--d~~~ll~~L~~~-F~~V~~~KP~sSR 188 (832)
+|++++... .+... .....+|..+.++|+|||.|++.+.... ....+...+... |..+........+
T Consensus 110 ~i~~~~~~~---~~~~~-----~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~ 179 (195)
T 3cgg_A 110 LIVSAGNVM---GFLAE-----DGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENAFESWDLK 179 (195)
T ss_dssp EEEECCCCG---GGSCH-----HHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEEESSTTCC
T ss_pred EEEECCcHH---hhcCh-----HHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeeeecccccC
Confidence 999984311 11110 1134677888999999999999765443 566777777655 7777665554333
No 44
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.04 E-value=9.8e-10 Score=114.22 Aligned_cols=95 Identities=19% Similarity=0.137 Sum_probs=71.8
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-C-----CCCCceEEEccCCChhHHHHHHHHHhhccCCcccE
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-A-----PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-~-----~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDl 114 (832)
.++.+|||||||+|.++..++.. +..|+|||+++. . ..+++.++++|+.+... .+.||+
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~------------~~~fD~ 113 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADS---FGTVEGLELSADMLAIARRRNPDAVLHHGDMRDFSL------------GRRFSA 113 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTT---SSEEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCC------------SCCEEE
T ss_pred CCCCcEEEeCCcCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhCCCCEEEECChHHCCc------------cCCcCE
Confidence 56789999999999999998876 458999999972 1 24589999999987531 267899
Q ss_pred EEeCC-CCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEE
Q 003302 115 VLHDG-SPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTK 158 (832)
Q Consensus 115 VlsDg-apnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~K 158 (832)
|+|.+ ... |..+ ......+|..+.++|+|||+|++.
T Consensus 114 v~~~~~~l~----~~~~----~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 114 VTCMFSSIG----HLAG----QAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp EEECTTGGG----GSCH----HHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred EEEcCchhh----hcCC----HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 99975 321 1111 122356788899999999999984
No 45
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.03 E-value=6.2e-10 Score=114.93 Aligned_cols=95 Identities=23% Similarity=0.223 Sum_probs=71.7
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC--------CCCCCceEEEccCCChhHHHHHHHHHhhccCCccc
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI--------APIRGAVSLEQDITKPECRARVKKVMEEHGVRAFD 113 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~--------~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FD 113 (832)
++.+|||||||+|.++..++...+ ..|+|||+++. ...+++.++++|+.+.+ +. .+.||
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~--------~~---~~~fD 110 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGA--KKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIA--------IE---PDAYN 110 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCC--------CC---TTCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCC--------CC---CCCeE
Confidence 688999999999999999988732 38999999972 12467999999997643 11 26789
Q ss_pred EEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEc
Q 003302 114 LVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVF 160 (832)
Q Consensus 114 lVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVF 160 (832)
+|++..... +..+ ...+|..+.++|+|||+|++.++
T Consensus 111 ~v~~~~~l~----~~~~-------~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 111 VVLSSLALH----YIAS-------FDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp EEEEESCGG----GCSC-------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEchhhh----hhhh-------HHHHHHHHHHHcCCCcEEEEEeC
Confidence 999976421 1111 24677889999999999999643
No 46
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.03 E-value=6.5e-10 Score=115.51 Aligned_cols=116 Identities=20% Similarity=0.170 Sum_probs=79.5
Q ss_pred cCchhHHHHHHHhhhhhcCCCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCC-CCC-----CCCceEEE-ccCC
Q 003302 20 HGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVP-IAP-----IRGAVSLE-QDIT 92 (832)
Q Consensus 20 ~gyrsRaafKLiqi~~kf~fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp-~~~-----i~~V~~i~-gDIt 92 (832)
..|.+|+.+||..+...|.+..++.+|||||||||+++..+++. + ...|+|||+++ |.. .+.+.... .++.
T Consensus 15 ~~yvsrg~~kL~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~-g-~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~ 92 (232)
T 3opn_A 15 LRYVSRGGLKLEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQN-G-AKLVYALDVGTNQLAWKIRSDERVVVMEQFNFR 92 (232)
T ss_dssp CCSSSTTHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEECSSCCCCCHHHHTCTTEEEECSCCGG
T ss_pred CCccCCcHHHHHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhc-C-CCEEEEEcCCHHHHHHHHHhCccccccccceEE
Confidence 46999999999999999887667889999999999999999987 2 34999999998 432 23332221 1222
Q ss_pred ChhHHHHHHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEE
Q 003302 93 KPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKV 159 (832)
Q Consensus 93 ~~~~~~~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KV 159 (832)
.... ..+. ...||.+.+|..... . ..+|..+.++|+|||+|++.+
T Consensus 93 ~~~~-----~~~~---~~~~d~~~~D~v~~~-----l---------~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 93 NAVL-----ADFE---QGRPSFTSIDVSFIS-----L---------DLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp GCCG-----GGCC---SCCCSEEEECCSSSC-----G---------GGTHHHHHHHSCTTCEEEEEE
T ss_pred EeCH-----hHcC---cCCCCEEEEEEEhhh-----H---------HHHHHHHHHhccCCCEEEEEE
Confidence 1100 0011 123577777754221 1 246778899999999999853
No 47
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.03 E-value=3.2e-10 Score=113.39 Aligned_cols=128 Identities=12% Similarity=0.062 Sum_probs=83.8
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----------CCCCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----------APIRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----------~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
++.+|||+|||+|.++..++...| ++.|+|||+++. ..++++.++++|+.+.. ..+
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~------------~~~ 131 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRP-EAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP------------SEP 131 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC------------CCS
T ss_pred CCCeEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC------------ccC
Confidence 478999999999999999998876 679999999972 13456899999998742 126
Q ss_pred cccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHHHHHcccceEEecCCCCCCC
Q 003302 111 AFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSA 190 (832)
Q Consensus 111 ~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~L~~~F~~V~~~KP~sSR~~ 190 (832)
.||+|++++.. . ...++..+.++|+|||+|++.. .......+..++. .|..+.+.....+...
T Consensus 132 ~~D~i~~~~~~------~---------~~~~l~~~~~~L~~gG~l~~~~-~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~ 194 (207)
T 1jsx_A 132 PFDGVISRAFA------S---------LNDMVSWCHHLPGEQGRFYALK-GQMPEDEIALLPE-EYQVESVVKLQVPALD 194 (207)
T ss_dssp CEEEEECSCSS------S---------HHHHHHHHTTSEEEEEEEEEEE-SSCCHHHHHTSCT-TEEEEEEEEEECC--C
T ss_pred CcCEEEEeccC------C---------HHHHHHHHHHhcCCCcEEEEEe-CCCchHHHHHHhc-CCceeeeeeeccCCCC
Confidence 78999987421 0 1356778899999999999843 3333344333333 3444442211222223
Q ss_pred CcceeEEEe
Q 003302 191 SAEIYLLGI 199 (832)
Q Consensus 191 SaEiyvVc~ 199 (832)
....++++.
T Consensus 195 ~~~~~~~~~ 203 (207)
T 1jsx_A 195 GERHLVVIK 203 (207)
T ss_dssp CEEEEEEEE
T ss_pred CceEEEEEE
Confidence 334555554
No 48
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.02 E-value=8.2e-10 Score=110.02 Aligned_cols=135 Identities=13% Similarity=0.102 Sum_probs=92.1
Q ss_pred CCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-C-----CCCCceEEEccCCChhHHHHHHHHHhhccCCcccEEE
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-A-----PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-~-----~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVl 116 (832)
+.+|||||||+|.++..++.. +..|+|||+++. . ..+++.++++|+.+.. +. .+.||+|+
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~--------~~---~~~fD~v~ 107 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL---GHQIEGLEPATRLVELARQTHPSVTFHHGTITDLS--------DS---PKRWAGLL 107 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT---TCCEEEECCCHHHHHHHHHHCTTSEEECCCGGGGG--------GS---CCCEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHhCCCCeEEeCcccccc--------cC---CCCeEEEE
Confidence 789999999999999999887 458999999972 1 2568999999998743 11 26789999
Q ss_pred eCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCC---------------CHHHHHHHHHHc-ccceE
Q 003302 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQ---------------DYSSVLYCLKQL-FEKVE 180 (832)
Q Consensus 117 sDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~---------------d~~~ll~~L~~~-F~~V~ 180 (832)
+...... +..+ ....+|..+.++|+|||+|++.++... +...+..+|... |..+.
T Consensus 108 ~~~~l~~---~~~~------~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 178 (203)
T 3h2b_A 108 AWYSLIH---MGPG------ELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTS 178 (203)
T ss_dssp EESSSTT---CCTT------THHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEE
T ss_pred ehhhHhc---CCHH------HHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEE
Confidence 9864321 1111 124577889999999999999775442 245677777765 76666
Q ss_pred EecCCCCCCCCcceeEEEeeccCC
Q 003302 181 VDKPAASRSASAEIYLLGIKYKAP 204 (832)
Q Consensus 181 ~~KP~sSR~~SaEiyvVc~gfk~p 204 (832)
+..- .. ..-.+++...+.++
T Consensus 179 ~~~~-~~---~p~~~l~~~~~~~~ 198 (203)
T 3h2b_A 179 SHWD-PR---FPHAYLTAEASLEH 198 (203)
T ss_dssp EEEC-TT---SSEEEEEEEECC--
T ss_pred EEec-CC---Ccchhhhhhhhhhh
Confidence 5422 11 33455555555544
No 49
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=99.01 E-value=4.7e-10 Score=124.03 Aligned_cols=125 Identities=22% Similarity=0.139 Sum_probs=86.7
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------------CCCCceEEEccCCChhHHHHHHH
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------------PIRGAVSLEQDITKPECRARVKK 102 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------------~i~~V~~i~gDIt~~~~~~~l~~ 102 (832)
.++|.+|||+||||||.+.+++..++ ++.|+++|+++-. ...+|.+.+.|.+.+..
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~~-~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~------ 218 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTGC-CRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGE------ 218 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTTC-EEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHH------
T ss_pred CCCCCEEEEecCCccHHHHHHHHhcC-CCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcch------
Confidence 36899999999999999999998775 5689999998521 11356777788776421
Q ss_pred HHhhccCCcccEEEeCCCCCCCCC----------c--hhHHhH-HhHHHHHHHHHHHhhcccCcEEEEE---EcCCCCHH
Q 003302 103 VMEEHGVRAFDLVLHDGSPNVGGA----------W--AQEAMS-QNALVIDSVKLATQFLAPKGTFVTK---VFRSQDYS 166 (832)
Q Consensus 103 ~L~~~~~~~FDlVlsDgapnv~g~----------w--~~D~~~-q~~L~~~aLk~A~~~LkpGG~fV~K---VFrs~d~~ 166 (832)
...+.||.||+|+++...|. | ...... ...++..+|..|..+|+|||++|.. ++..++-.
T Consensus 219 ----~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ENE~ 294 (359)
T 4fzv_A 219 ----LEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEY 294 (359)
T ss_dssp ----HSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTTTHH
T ss_pred ----hccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhhCHH
Confidence 12267899999987654211 1 111111 2356678899999999999999964 34455655
Q ss_pred HHHHHHHHc
Q 003302 167 SVLYCLKQL 175 (832)
Q Consensus 167 ~ll~~L~~~ 175 (832)
.+.++|..+
T Consensus 295 vV~~~L~~~ 303 (359)
T 4fzv_A 295 VVQGAIELL 303 (359)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhC
Confidence 566777654
No 50
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.01 E-value=7.5e-10 Score=112.04 Aligned_cols=128 Identities=13% Similarity=0.108 Sum_probs=83.7
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
.++.+|||||||+|.++..++...| ++.|+|||+++.. .++++.++++|+.+... .+. .
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~------~~~---~ 109 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNP-DINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTD------YFE---D 109 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGG------TSC---T
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCC-CCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHh------hcC---C
Confidence 4578999999999999999999986 6799999999621 34689999999987431 121 2
Q ss_pred CcccEEEeCCCCCCCCCchhH-HhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHHHHHc-ccceEEe
Q 003302 110 RAFDLVLHDGSPNVGGAWAQE-AMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL-FEKVEVD 182 (832)
Q Consensus 110 ~~FDlVlsDgapnv~g~w~~D-~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~L~~~-F~~V~~~ 182 (832)
+.||+|+++.+. .|... +.........++..+.++|+|||+|++.+-.......++..|... |..+.+.
T Consensus 110 ~~~D~i~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 180 (214)
T 1yzh_A 110 GEIDRLYLNFSD----PWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGMKLNGVW 180 (214)
T ss_dssp TCCSEEEEESCC----CCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCCEEEEECCC----CccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCCCeeeecc
Confidence 568999998542 12111 111001124567788999999999998542211123344445433 5444444
No 51
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.01 E-value=8.2e-10 Score=108.45 Aligned_cols=137 Identities=15% Similarity=0.083 Sum_probs=90.1
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC--CCCCCceEEEccCCChhHHHHHHHHHhhccCCcccEEEeC
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI--APIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~--~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsD 118 (832)
.++.+|||||||+|.++..++... .|+|||+++. ...+++.++++|+.++. .. +.||+|+++
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~~~~~~~~~~d~~~~~---------~~---~~fD~i~~n 85 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALESHRGGNLVRADLLCSI---------NQ---ESVDVVVFN 85 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHTCSSSCEEECSTTTTB---------CG---GGCSEEEEC
T ss_pred CCCCeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhcccCCeEEECChhhhc---------cc---CCCCEEEEC
Confidence 356799999999999999998763 9999999972 12567999999998731 11 678999998
Q ss_pred CCCCCCCCc---hhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHHHHHc-ccceEEecCCCCCCCCcce
Q 003302 119 GSPNVGGAW---AQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL-FEKVEVDKPAASRSASAEI 194 (832)
Q Consensus 119 gapnv~g~w---~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~L~~~-F~~V~~~KP~sSR~~SaEi 194 (832)
++....... ... ... ...+..+.+.| |||+|++..........+...+... |..+.+..-.. .-+.
T Consensus 86 ~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~gf~~~~~~~~~~----~~e~ 155 (170)
T 3q87_B 86 PPYVPDTDDPIIGGG-YLG----REVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEERGYGTRILKVRKI----LGET 155 (170)
T ss_dssp CCCBTTCCCTTTBCC-GGG----CHHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHTTCEEEEEEEEEC----SSSE
T ss_pred CCCccCCccccccCC-cch----HHHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHCCCcEEEEEeecc----CCce
Confidence 753311100 000 000 12344556666 9999999766666667777777765 76666553322 2345
Q ss_pred eEEEeeccC
Q 003302 195 YLLGIKYKA 203 (832)
Q Consensus 195 yvVc~gfk~ 203 (832)
+++...++.
T Consensus 156 ~~~~~~~~~ 164 (170)
T 3q87_B 156 VYIIKGEKS 164 (170)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEecc
Confidence 556555554
No 52
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.00 E-value=1.1e-09 Score=106.28 Aligned_cols=110 Identities=11% Similarity=0.122 Sum_probs=79.7
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----------CCCC-CceEEEccCCChhHHHHHHHHHhhc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----------APIR-GAVSLEQDITKPECRARVKKVMEEH 107 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----------~~i~-~V~~i~gDIt~~~~~~~l~~~L~~~ 107 (832)
+.++.+|||+|||+|.++..++...| ++.|+|+|+++. ..++ ++ ++++|+... +...
T Consensus 23 ~~~~~~vldiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~---------~~~~ 91 (178)
T 3hm2_A 23 PKPHETLWDIGGGSGSIAIEWLRSTP-QTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRA---------FDDV 91 (178)
T ss_dssp CCTTEEEEEESTTTTHHHHHHHTTSS-SEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGG---------GGGC
T ss_pred ccCCCeEEEeCCCCCHHHHHHHHHCC-CCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhh---------hhcc
Confidence 46788999999999999999998875 679999999972 1344 67 888887542 2211
Q ss_pred cCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHHHHHcc
Q 003302 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLF 176 (832)
Q Consensus 108 ~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~L~~~F 176 (832)
.+.||+|++++... + ..++..+.++|+|||+|++..+.......+...+..+.
T Consensus 92 -~~~~D~i~~~~~~~----~-----------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~ 144 (178)
T 3hm2_A 92 -PDNPDVIFIGGGLT----A-----------PGVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQFG 144 (178)
T ss_dssp -CSCCSEEEECC-TT----C-----------TTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHHC
T ss_pred -CCCCCEEEECCccc----H-----------HHHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHcC
Confidence 15689999986432 1 23566788999999999997766555556666666653
No 53
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.00 E-value=3.3e-09 Score=109.36 Aligned_cols=100 Identities=19% Similarity=0.226 Sum_probs=75.0
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC---------CCCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA---------PIRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~---------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
+.++.+|||||||+|.++..++... ++.|+|||+++.. ..+++.++++|+.+.+ +. .+
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~--------~~---~~ 119 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKE--------FP---EN 119 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCC--------CC---TT
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCC--------CC---CC
Confidence 4678899999999999999999875 4699999999721 1268999999998753 11 26
Q ss_pred cccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcC
Q 003302 111 AFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFR 161 (832)
Q Consensus 111 ~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFr 161 (832)
.||+|++..... +... .....+|..+.++|+|||+|++..+.
T Consensus 120 ~fD~v~~~~~l~----~~~~-----~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (266)
T 3ujc_A 120 NFDLIYSRDAIL----ALSL-----ENKNKLFQKCYKWLKPTGTLLITDYC 161 (266)
T ss_dssp CEEEEEEESCGG----GSCH-----HHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred cEEEEeHHHHHH----hcCh-----HHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 789999975421 1100 12346788899999999999987653
No 54
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.00 E-value=1.8e-09 Score=108.60 Aligned_cols=121 Identities=17% Similarity=0.205 Sum_probs=84.6
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC---------CCCCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI---------APIRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~---------~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
..++.+|||||||+|.++..++.. +..|+|||+++. ...+++.++++|+.+.. ..+
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~------------~~~ 113 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPH---CKRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS------------TAE 113 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGG---EEEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC------------CSC
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC------------CCC
Confidence 456789999999999999999887 358999999962 12357999999998753 127
Q ss_pred cccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCC---------CCHHHHHHHHHHcccceEE
Q 003302 111 AFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRS---------QDYSSVLYCLKQLFEKVEV 181 (832)
Q Consensus 111 ~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs---------~d~~~ll~~L~~~F~~V~~ 181 (832)
.||+|++..... |..+. ..+..+|..+.++|+|||+|++.++.. .....+...+...|..+..
T Consensus 114 ~fD~v~~~~~l~----~~~~~----~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 185 (216)
T 3ofk_A 114 LFDLIVVAEVLY----YLEDM----TQMRTAIDNMVKMLAPGGHLVFGSARDATCRRWGHVAGAETVITILTEALTEVER 185 (216)
T ss_dssp CEEEEEEESCGG----GSSSH----HHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHTTCSCCHHHHHHHHHHHSEEEEE
T ss_pred CccEEEEccHHH----hCCCH----HHHHHHHHHHHHHcCCCCEEEEEecCCCcchhhhhhhhHHHHHHHHHhhccceEE
Confidence 789999985421 22211 223467888999999999999865322 2233445556555666654
Q ss_pred ec
Q 003302 182 DK 183 (832)
Q Consensus 182 ~K 183 (832)
+.
T Consensus 186 ~~ 187 (216)
T 3ofk_A 186 VQ 187 (216)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 55
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.00 E-value=1.9e-09 Score=108.16 Aligned_cols=137 Identities=18% Similarity=0.253 Sum_probs=91.4
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-C----CCCCceEEEccCCChhHHHHHHHHHhhccCCcccEE
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-A----PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV 115 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-~----~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlV 115 (832)
.++.+|||||||+|.++..++.. +..|+|||+++. . ...++.++++|+.+... ........||+|
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~-------~~~~~~~~fD~v 120 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADR---GIEAVGVDGDRTLVDAARAAGAGEVHLASYAQLAE-------AKVPVGKDYDLI 120 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHTCSSCEEECCHHHHHT-------TCSCCCCCEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCCHHHHHHHHHhcccccchhhHHhhcc-------cccccCCCccEE
Confidence 35689999999999999999877 458999999972 1 23567788887654310 001112459999
Q ss_pred EeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCC-------------------------------CC
Q 003302 116 LHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRS-------------------------------QD 164 (832)
Q Consensus 116 lsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs-------------------------------~d 164 (832)
++..... ..+ ...+|..+.++|+|||+|++.++.. .+
T Consensus 121 ~~~~~l~-----~~~-------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (227)
T 3e8s_A 121 CANFALL-----HQD-------IIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRT 188 (227)
T ss_dssp EEESCCC-----SSC-------CHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECC
T ss_pred EECchhh-----hhh-------HHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEec
Confidence 9986533 111 1356778899999999999976521 13
Q ss_pred HHHHHHHHHHc-ccceEEecCCCCCCC-CcceeEEEe
Q 003302 165 YSSVLYCLKQL-FEKVEVDKPAASRSA-SAEIYLLGI 199 (832)
Q Consensus 165 ~~~ll~~L~~~-F~~V~~~KP~sSR~~-SaEiyvVc~ 199 (832)
...+..+|... |..+.+..|..+... ....++|++
T Consensus 189 ~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~va~ 225 (227)
T 3e8s_A 189 LASWLNALDMAGLRLVSLQEPQHPQSAVPQSLLMVAE 225 (227)
T ss_dssp HHHHHHHHHHTTEEEEEEECCCCTTCSSCSCEEEEEE
T ss_pred HHHHHHHHHHcCCeEEEEecCCCCCCCCceeEEEEee
Confidence 46677777765 887777766554432 234566654
No 56
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.00 E-value=5.8e-10 Score=112.27 Aligned_cols=121 Identities=13% Similarity=0.111 Sum_probs=88.7
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
+.++.+|||||||+|.++..++...++.+.|+|||+++.. .++++.++++|+.+.. +.
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~--------~~--- 103 (219)
T 3dh0_A 35 LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIP--------LP--- 103 (219)
T ss_dssp CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCS--------SC---
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCC--------CC---
Confidence 4678899999999999999999987556799999999721 3457999999998743 11
Q ss_pred CCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCC------------CHHHHHHHHHHc-
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQ------------DYSSVLYCLKQL- 175 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~------------d~~~ll~~L~~~- 175 (832)
.+.||+|++..... +..+ ...+|..+.++|+|||+|++..+... +...+...|...
T Consensus 104 ~~~fD~v~~~~~l~----~~~~-------~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 172 (219)
T 3dh0_A 104 DNTVDFIFMAFTFH----ELSE-------PLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAG 172 (219)
T ss_dssp SSCEEEEEEESCGG----GCSS-------HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTT
T ss_pred CCCeeEEEeehhhh----hcCC-------HHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCC
Confidence 26789999986422 1111 24567889999999999999654322 245667777765
Q ss_pred ccceEEe
Q 003302 176 FEKVEVD 182 (832)
Q Consensus 176 F~~V~~~ 182 (832)
|..+.+.
T Consensus 173 f~~~~~~ 179 (219)
T 3dh0_A 173 IRVGRVV 179 (219)
T ss_dssp CEEEEEE
T ss_pred CEEEEEE
Confidence 7766654
No 57
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=98.99 E-value=1.3e-09 Score=110.47 Aligned_cols=106 Identities=9% Similarity=0.050 Sum_probs=80.5
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----------CCCC-CceEEEccCCChhHHHHHHHHHhhc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----------APIR-GAVSLEQDITKPECRARVKKVMEEH 107 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----------~~i~-~V~~i~gDIt~~~~~~~l~~~L~~~ 107 (832)
+.++.+|||||||+|.++..++.. ++.|+|||+++. ..++ ++.++++|+.+.. ..
T Consensus 53 ~~~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~---------~~- 119 (204)
T 3njr_A 53 PRRGELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAAL---------AD- 119 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGG---------TT-
T ss_pred CCCCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhc---------cc-
Confidence 467889999999999999999987 569999999972 1345 7999999997621 11
Q ss_pred cCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHHHHHc
Q 003302 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL 175 (832)
Q Consensus 108 ~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~L~~~ 175 (832)
...||+|++++.. . .. ++..+.++|+|||+|++..+...+...+...+..+
T Consensus 120 -~~~~D~v~~~~~~------~---------~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~ 170 (204)
T 3njr_A 120 -LPLPEAVFIGGGG------S---------QA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARH 170 (204)
T ss_dssp -SCCCSEEEECSCC------C---------HH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHH
T ss_pred -CCCCCEEEECCcc------c---------HH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhC
Confidence 1468999998631 0 12 56778899999999999777666666666666665
No 58
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.99 E-value=2.7e-09 Score=108.69 Aligned_cols=103 Identities=17% Similarity=0.167 Sum_probs=77.2
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC---------CCCCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI---------APIRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~---------~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
..++.+|||||||+|.++..++...| +..|+|||+++. ...+++.++++|+.+... . +
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~-----------~-~ 108 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYP-EATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDF-----------E-E 108 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCC-----------C-S
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCC-----------C-C
Confidence 46789999999999999999999875 679999999972 123479999999987531 1 6
Q ss_pred cccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCC
Q 003302 111 AFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQD 164 (832)
Q Consensus 111 ~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d 164 (832)
.||+|++..... +..+. ....+|..+.++|+|||+|++..+....
T Consensus 109 ~fD~v~~~~~l~----~~~~~-----~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 153 (234)
T 3dtn_A 109 KYDMVVSALSIH----HLEDE-----DKKELYKRSYSILKESGIFINADLVHGE 153 (234)
T ss_dssp CEEEEEEESCGG----GSCHH-----HHHHHHHHHHHHEEEEEEEEEEEECBCS
T ss_pred CceEEEEeCccc----cCCHH-----HHHHHHHHHHHhcCCCcEEEEEEecCCC
Confidence 789999985421 22211 1235778899999999999987654443
No 59
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.98 E-value=8.3e-10 Score=112.41 Aligned_cols=117 Identities=15% Similarity=0.087 Sum_probs=77.7
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-C----------CCC-CceEEEccCCChhHHHHHHHHHhh-c
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-A----------PIR-GAVSLEQDITKPECRARVKKVMEE-H 107 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-~----------~i~-~V~~i~gDIt~~~~~~~l~~~L~~-~ 107 (832)
.++.+|||||||+|.++..++..++.++.|+|||+++. . .+. +|.++++|+.... ..+.. .
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l------~~~~~~~ 130 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLI------PQLKKKY 130 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHG------GGTTTTS
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHH------HHHHHhc
Confidence 36789999999999999999998877889999999972 1 232 4899999975421 01110 0
Q ss_pred cCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHHHHHc
Q 003302 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL 175 (832)
Q Consensus 108 ~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~L~~~ 175 (832)
..+.||+|++|+... +..+ ....+..+ ++|+|||+||+.-........+...+...
T Consensus 131 ~~~~fD~V~~d~~~~----~~~~-------~~~~~~~~-~~LkpgG~lv~~~~~~~~~~~~~~~l~~~ 186 (221)
T 3u81_A 131 DVDTLDMVFLDHWKD----RYLP-------DTLLLEKC-GLLRKGTVLLADNVIVPGTPDFLAYVRGS 186 (221)
T ss_dssp CCCCCSEEEECSCGG----GHHH-------HHHHHHHT-TCCCTTCEEEESCCCCCCCHHHHHHHHHC
T ss_pred CCCceEEEEEcCCcc----cchH-------HHHHHHhc-cccCCCeEEEEeCCCCcchHHHHHHHhhC
Confidence 115789999996421 1111 12344445 99999999998544444445555555543
No 60
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.98 E-value=1.1e-09 Score=113.08 Aligned_cols=94 Identities=13% Similarity=0.073 Sum_probs=69.8
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCC-CC----------CCCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVP-IA----------PIRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp-~~----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
.++.+|||||||+|.++..++...+ ++.|+|||+++ +. .+++|.++++|+.+.. +.....
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--------~~~~~~ 139 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFP-HLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFG--------QRKDVR 139 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHT--------TCTTTT
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhc--------cccccc
Confidence 5678999999999999999998655 67999999997 21 3457999999986532 000002
Q ss_pred CcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEE
Q 003302 110 RAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTK 158 (832)
Q Consensus 110 ~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~K 158 (832)
+.||+|++++.. + ...++..+.++|+|||+|++.
T Consensus 140 ~~fD~V~~~~~~--------~-------~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 140 ESYDIVTARAVA--------R-------LSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp TCEEEEEEECCS--------C-------HHHHHHHHGGGEEEEEEEEEE
T ss_pred CCccEEEEeccC--------C-------HHHHHHHHHHhcCCCCEEEEE
Confidence 678999997521 0 235677889999999999873
No 61
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.97 E-value=9.1e-10 Score=113.08 Aligned_cols=110 Identities=12% Similarity=0.130 Sum_probs=77.0
Q ss_pred hcCCCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC---CCCCceEEEccCCChhHHHHHHHHHhhccCCcc
Q 003302 36 KFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA---PIRGAVSLEQDITKPECRARVKKVMEEHGVRAF 112 (832)
Q Consensus 36 kf~fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~---~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~F 112 (832)
....+.++.+|||||||+|.++..++.. +..|+|||+++.. ...++.++++|+.+.. ..+. .+.|
T Consensus 35 ~l~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~d~~~~~------~~~~---~~~f 102 (240)
T 3dli_A 35 YIPYFKGCRRVLDIGCGRGEFLELCKEE---GIESIGVDINEDMIKFCEGKFNVVKSDAIEYL------KSLP---DKYL 102 (240)
T ss_dssp GGGGTTTCSCEEEETCTTTHHHHHHHHH---TCCEEEECSCHHHHHHHHTTSEEECSCHHHHH------HTSC---TTCB
T ss_pred HHhhhcCCCeEEEEeCCCCHHHHHHHhC---CCcEEEEECCHHHHHHHHhhcceeeccHHHHh------hhcC---CCCe
Confidence 3445678899999999999999999887 4579999999721 1123788888876521 0122 2678
Q ss_pred cEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHH
Q 003302 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYS 166 (832)
Q Consensus 113 DlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~ 166 (832)
|+|+|..... |..+. .+..+|..+.++|+|||+|++.++....+.
T Consensus 103 D~i~~~~~l~----~~~~~-----~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~ 147 (240)
T 3dli_A 103 DGVMISHFVE----HLDPE-----RLFELLSLCYSKMKYSSYIVIESPNPTSLY 147 (240)
T ss_dssp SEEEEESCGG----GSCGG-----GHHHHHHHHHHHBCTTCCEEEEEECTTSHH
T ss_pred eEEEECCchh----hCCcH-----HHHHHHHHHHHHcCCCcEEEEEeCCcchhH
Confidence 9999975422 21111 124577889999999999999877665543
No 62
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.97 E-value=1.7e-09 Score=120.85 Aligned_cols=102 Identities=21% Similarity=0.244 Sum_probs=75.0
Q ss_pred CCCCEEEEEcCC------cCHHHHHHHHhCCCCCEEEEEeCCCCC--CCCCceEEEccCCChhHHHHHHHHHhhccCCcc
Q 003302 41 RSSHAVLDLCAA------PGGWMQVAVQRVPVGSLVLGLDLVPIA--PIRGAVSLEQDITKPECRARVKKVMEEHGVRAF 112 (832)
Q Consensus 41 ~~g~~VLDLGcG------PGg~sq~La~~~p~~~~ViGVDLsp~~--~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~F 112 (832)
.++.+||||||| +|+++..++..+.+++.|+|||+++.. ..++|.++++|+.+++....+... . ++|
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~~~~rI~fv~GDa~dlpf~~~l~~~--d---~sF 289 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHVDELRIRTIQGDQNDAEFLDRIARR--Y---GPF 289 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGGCBTTEEEEECCTTCHHHHHHHHHH--H---CCE
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhhcCCCcEEEEecccccchhhhhhcc--c---CCc
Confidence 456899999999 777776666543337899999999843 346899999999997654333221 1 678
Q ss_pred cEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEE
Q 003302 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKV 159 (832)
Q Consensus 113 DlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KV 159 (832)
|+|+|+++ ++..+ ...+|..+.++|+|||+|++.-
T Consensus 290 DlVisdgs-----H~~~d-------~~~aL~el~rvLKPGGvlVi~D 324 (419)
T 3sso_A 290 DIVIDDGS-----HINAH-------VRTSFAALFPHVRPGGLYVIED 324 (419)
T ss_dssp EEEEECSC-----CCHHH-------HHHHHHHHGGGEEEEEEEEEEC
T ss_pred cEEEECCc-----ccchh-------HHHHHHHHHHhcCCCeEEEEEe
Confidence 99999864 22222 2467889999999999999953
No 63
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.96 E-value=5.9e-10 Score=118.42 Aligned_cols=113 Identities=12% Similarity=0.020 Sum_probs=81.3
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----------CCCCC-ceEEEccCCChhHHHHHHHHHhhc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----------APIRG-AVSLEQDITKPECRARVKKVMEEH 107 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----------~~i~~-V~~i~gDIt~~~~~~~l~~~L~~~ 107 (832)
+.++.+|||||||+|+|+..++...+. .|+|||+++. ..+.+ +.++++|+.+...
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~~--~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~----------- 189 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKA--KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG----------- 189 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCC--EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-----------
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-----------
Confidence 467999999999999999999988542 8999999972 13444 8899999987531
Q ss_pred cCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCC------CCHHHHHHHHHHcccceEE
Q 003302 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRS------QDYSSVLYCLKQLFEKVEV 181 (832)
Q Consensus 108 ~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs------~d~~~ll~~L~~~F~~V~~ 181 (832)
.+.||+|++|+++.. ...+..+.++|+|||+|++..+.+ .....+...+......+..
T Consensus 190 -~~~fD~Vi~~~p~~~---------------~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 190 -ENIADRILMGYVVRT---------------HEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp -CSCEEEEEECCCSSG---------------GGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEE
T ss_pred -cCCccEEEECCchhH---------------HHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEE
Confidence 267899999875321 123456889999999999866642 2345555556655434444
No 64
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.96 E-value=1.3e-09 Score=110.95 Aligned_cols=105 Identities=13% Similarity=0.193 Sum_probs=74.2
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----------CCCCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----------APIRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----------~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
.++.+|||||||+|.++..++...| +..|+|||+++- ..+++|.++++|+..+. ..+..
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~------~~~~~--- 106 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNP-DINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLT------DVFEP--- 106 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHH------HHCCT---
T ss_pred CCCceEEEEecCCCHHHHHHHHHCC-CCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHH------hhcCc---
Confidence 4678999999999999999999876 679999999962 13568999999998732 12322
Q ss_pred CcccEEEeCCCCCCCCCchhH-HhHHhHHHHHHHHHHHhhcccCcEEEEEE
Q 003302 110 RAFDLVLHDGSPNVGGAWAQE-AMSQNALVIDSVKLATQFLAPKGTFVTKV 159 (832)
Q Consensus 110 ~~FDlVlsDgapnv~g~w~~D-~~~q~~L~~~aLk~A~~~LkpGG~fV~KV 159 (832)
+.||.|+++.+. .|... +.........+|..+.++|+|||.|++.+
T Consensus 107 ~~~d~v~~~~~~----p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 107 GEVKRVYLNFSD----PWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp TSCCEEEEESCC----CCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred CCcCEEEEECCC----CCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 568999886531 12211 10000012456788999999999999855
No 65
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.96 E-value=4.6e-09 Score=107.86 Aligned_cols=108 Identities=13% Similarity=0.047 Sum_probs=78.0
Q ss_pred CCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC--------CCCCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 39 FLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI--------APIRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 39 fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~--------~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
.+.++.+|||||||+|.++..++...+ .|+|||+++. .+..++.++++|+.++..... +... .
T Consensus 53 ~~~~~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~----~~~~--~ 123 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQ----IHSE--I 123 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHH----HHHH--H
T ss_pred ccCCCCeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccc----cccc--c
Confidence 357888999999999999999999854 7999999972 133479999999999654321 1110 2
Q ss_pred cccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCC
Q 003302 111 AFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQD 164 (832)
Q Consensus 111 ~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d 164 (832)
.||+|+++..... .... ....+|..+.++|+|||+|++..+...+
T Consensus 124 ~~d~v~~~~~~~~----~~~~-----~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 168 (245)
T 3ggd_A 124 GDANIYMRTGFHH----IPVE-----KRELLGQSLRILLGKQGAMYLIELGTGC 168 (245)
T ss_dssp CSCEEEEESSSTT----SCGG-----GHHHHHHHHHHHHTTTCEEEEEEECTTH
T ss_pred CccEEEEcchhhc----CCHH-----HHHHHHHHHHHHcCCCCEEEEEeCCccc
Confidence 4799999865322 1110 1245778889999999998887776543
No 66
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.96 E-value=1e-09 Score=110.25 Aligned_cols=141 Identities=17% Similarity=0.113 Sum_probs=93.9
Q ss_pred CCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-C----CCCCceEEEccCCChhHHHHHHHHHhhccCCccc
Q 003302 39 FLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-A----PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFD 113 (832)
Q Consensus 39 fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-~----~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FD 113 (832)
.+.++.+|||||||+|.++..++.. +..|+|||+++. . ...++.++++|+.... ..+.||
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~~------------~~~~fD 104 (211)
T 3e23_A 40 ELPAGAKILELGCGAGYQAEAMLAA---GFDVDATDGSPELAAEASRRLGRPVRTMLFHQLD------------AIDAYD 104 (211)
T ss_dssp TSCTTCEEEESSCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHTSCCEECCGGGCC------------CCSCEE
T ss_pred hcCCCCcEEEECCCCCHHHHHHHHc---CCeEEEECCCHHHHHHHHHhcCCceEEeeeccCC------------CCCcEE
Confidence 3567899999999999999999886 469999999972 1 1126777888887642 127899
Q ss_pred EEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCC--------------CCHHHHHHHHHHc--cc
Q 003302 114 LVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRS--------------QDYSSVLYCLKQL--FE 177 (832)
Q Consensus 114 lVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs--------------~d~~~ll~~L~~~--F~ 177 (832)
+|++..... +... .....+|..+.++|+|||+|++.+... .+...+..+|... |.
T Consensus 105 ~v~~~~~l~----~~~~-----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~ 175 (211)
T 3e23_A 105 AVWAHACLL----HVPR-----DELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWA 175 (211)
T ss_dssp EEEECSCGG----GSCH-----HHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCS
T ss_pred EEEecCchh----hcCH-----HHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcE
Confidence 999976421 1110 123467888999999999999975532 2456677777754 77
Q ss_pred ceEEecCCCC-CCCCcceeEEEeeccC
Q 003302 178 KVEVDKPAAS-RSASAEIYLLGIKYKA 203 (832)
Q Consensus 178 ~V~~~KP~sS-R~~SaEiyvVc~gfk~ 203 (832)
.+.+...... -......++.+....+
T Consensus 176 ~~~~~~~~~~~~~~~~~~wl~~~~~~~ 202 (211)
T 3e23_A 176 SVAVESSEGKGFDQELAQFLHVSVRKP 202 (211)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred EEEEEeccCCCCCCCCceEEEEEEecC
Confidence 7665432222 2233345555555444
No 67
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.95 E-value=1.6e-09 Score=108.43 Aligned_cols=105 Identities=16% Similarity=0.091 Sum_probs=78.2
Q ss_pred hhcCCCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-------CCCCCceEEEccCCChhHHHHHHHHHhhc
Q 003302 35 SKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-------APIRGAVSLEQDITKPECRARVKKVMEEH 107 (832)
Q Consensus 35 ~kf~fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-------~~i~~V~~i~gDIt~~~~~~~l~~~L~~~ 107 (832)
..+..+.++.+|||||||+|.++..++.. +..|+|||+++. ...+++.++++|+.+..
T Consensus 39 ~~l~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~~------------ 103 (218)
T 3ou2_A 39 ERLRAGNIRGDVLELASGTGYWTRHLSGL---ADRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDWT------------ 103 (218)
T ss_dssp HHHTTTTSCSEEEEESCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSCC------------
T ss_pred HHHhcCCCCCeEEEECCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHhcCCCCeEEEecccccCC------------
Confidence 33444667889999999999999999988 469999999972 13467999999998741
Q ss_pred cCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCC
Q 003302 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQ 163 (832)
Q Consensus 108 ~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~ 163 (832)
..+.||+|++.... .+..+ ..+..+|..+.++|+|||.|++..+...
T Consensus 104 ~~~~~D~v~~~~~l----~~~~~-----~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 150 (218)
T 3ou2_A 104 PDRQWDAVFFAHWL----AHVPD-----DRFEAFWESVRSAVAPGGVVEFVDVTDH 150 (218)
T ss_dssp CSSCEEEEEEESCG----GGSCH-----HHHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred CCCceeEEEEechh----hcCCH-----HHHHHHHHHHHHHcCCCeEEEEEeCCCC
Confidence 12788999997532 12222 1235678889999999999999766543
No 68
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.95 E-value=1.1e-09 Score=113.25 Aligned_cols=115 Identities=17% Similarity=0.142 Sum_probs=84.9
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCCC-ceEEEccCCChhHHHHHHHHHhhc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIRG-AVSLEQDITKPECRARVKKVMEEH 107 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~~-V~~i~gDIt~~~~~~~l~~~L~~~ 107 (832)
+.++.+|||+|||+|.++..++..+++.+.|+|+|+++.. .+++ +.++++|+.+. +.
T Consensus 91 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---------~~-- 159 (255)
T 3mb5_A 91 ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG---------IE-- 159 (255)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC---------CC--
T ss_pred CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc---------cC--
Confidence 4678999999999999999999986557899999999621 3455 89999998753 11
Q ss_pred cCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHHHHHc---ccceEEe
Q 003302 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL---FEKVEVD 182 (832)
Q Consensus 108 ~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~L~~~---F~~V~~~ 182 (832)
.+.||+|+++.+. . ..++..+.++|+|||+|++..........+...+... |..+.++
T Consensus 160 -~~~~D~v~~~~~~----~------------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g~~f~~~~~~ 220 (255)
T 3mb5_A 160 -EENVDHVILDLPQ----P------------ERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFKDYFMKPRTI 220 (255)
T ss_dssp -CCSEEEEEECSSC----G------------GGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTGGGBSCCEEE
T ss_pred -CCCcCEEEECCCC----H------------HHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCccccEEE
Confidence 2568999998531 1 1245678899999999998654444445566666654 7777665
No 69
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.94 E-value=1.2e-09 Score=109.28 Aligned_cols=114 Identities=15% Similarity=0.119 Sum_probs=85.5
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
+.++.+|||||||+|.++..++.. + .+.|+|||+++.. .+.++.++++|+....
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~------------- 122 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKL-G-AKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADV------------- 122 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTC-------------
T ss_pred ccCCCEEEEECCCCCHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccC-------------
Confidence 467899999999999999998875 3 4699999999721 3445899999997631
Q ss_pred CCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHHHHHc-ccceEEe
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL-FEKVEVD 182 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~L~~~-F~~V~~~ 182 (832)
.+.||+|++++.. . .+..++..+.++|+|||+|++..+.......+...+... |..+.+.
T Consensus 123 ~~~fD~i~~~~~~--------~------~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~Gf~~~~~~ 183 (205)
T 3grz_A 123 DGKFDLIVANILA--------E------ILLDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAENSFQIDLKM 183 (205)
T ss_dssp CSCEEEEEEESCH--------H------HHHHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHHHHHHTTEEEEEEE
T ss_pred CCCceEEEECCcH--------H------HHHHHHHHHHHhcCCCCEEEEEecCcccHHHHHHHHHHcCCceEEee
Confidence 1678999998531 1 124567788999999999999766666667777777755 6655543
No 70
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.94 E-value=1e-09 Score=121.71 Aligned_cols=104 Identities=18% Similarity=0.116 Sum_probs=76.1
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC------C-------------CCCceEEEccCCChhHHHHH
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA------P-------------IRGAVSLEQDITKPECRARV 100 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~------~-------------i~~V~~i~gDIt~~~~~~~l 100 (832)
+.++.+|||||||+|.++..++...++++.|+|||+++.. . .+++.++++|+.++....
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~-- 158 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAE-- 158 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCB--
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcc--
Confidence 4578899999999999999999987667899999999721 1 168999999998752100
Q ss_pred HHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEE
Q 003302 101 KKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKV 159 (832)
Q Consensus 101 ~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KV 159 (832)
......+.||+|+++.... |..+ ...+|..+.++|+|||+|++..
T Consensus 159 ---~~~~~~~~fD~V~~~~~l~----~~~d-------~~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 159 ---PEGVPDSSVDIVISNCVCN----LSTN-------KLALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp ---SCCCCTTCEEEEEEESCGG----GCSC-------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---cCCCCCCCEEEEEEccchh----cCCC-------HHHHHHHHHHHcCCCCEEEEEE
Confidence 0001126799999986432 2222 2367788999999999999854
No 71
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.94 E-value=2.6e-09 Score=107.98 Aligned_cols=100 Identities=16% Similarity=0.173 Sum_probs=72.7
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CC-----CCceEEEccCCChhHHHHHHHH
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PI-----RGAVSLEQDITKPECRARVKKV 103 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i-----~~V~~i~gDIt~~~~~~~l~~~ 103 (832)
+.++.+|||||||+|.++..++.. +..|+|||+++.. .+ .++.++++|+....
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~-------- 96 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLS-------- 96 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCC--------
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccC--------
Confidence 568899999999999999999887 5699999999621 11 14688899998743
Q ss_pred HhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcC
Q 003302 104 MEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFR 161 (832)
Q Consensus 104 L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFr 161 (832)
+. .+.||+|++..... +..+. .....+|..+.++|+|||+|++..+.
T Consensus 97 ~~---~~~~D~v~~~~~l~----~~~~~----~~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (235)
T 3sm3_A 97 FH---DSSFDFAVMQAFLT----SVPDP----KERSRIIKEVFRVLKPGAYLYLVEFG 143 (235)
T ss_dssp SC---TTCEEEEEEESCGG----GCCCH----HHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred CC---CCceeEEEEcchhh----cCCCH----HHHHHHHHHHHHHcCCCeEEEEEECC
Confidence 11 26789999975321 11121 11246788899999999999987653
No 72
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.93 E-value=2.1e-09 Score=119.43 Aligned_cols=119 Identities=18% Similarity=0.156 Sum_probs=84.9
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCC---CceEEEccCCChhHHHHHHHHHhhc
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIR---GAVSLEQDITKPECRARVKKVMEEH 107 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~---~V~~i~gDIt~~~~~~~l~~~L~~~ 107 (832)
++.+|||||||+|.++..++...| +..|+|||+++.. .+. ++.++++|+.+. +.
T Consensus 222 ~~~~VLDlGcG~G~~s~~la~~~p-~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~---------~~-- 289 (375)
T 4dcm_A 222 LEGEIVDLGCGNGVIGLTLLDKNP-QAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSG---------VE-- 289 (375)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTT---------CC--
T ss_pred CCCeEEEEeCcchHHHHHHHHHCC-CCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhcc---------CC--
Confidence 458999999999999999999875 6799999999731 122 477899999873 11
Q ss_pred cCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHHHHHcccceEEe
Q 003302 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVD 182 (832)
Q Consensus 108 ~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~L~~~F~~V~~~ 182 (832)
.+.||+|++|+++..+ .+..+. ....++..+.++|+|||+|++...+...|.. .+..+|..+.++
T Consensus 290 -~~~fD~Ii~nppfh~~-~~~~~~-----~~~~~l~~~~~~LkpgG~l~iv~n~~~~~~~---~l~~~fg~~~~~ 354 (375)
T 4dcm_A 290 -PFRFNAVLCNPPFHQQ-HALTDN-----VAWEMFHHARRCLKINGELYIVANRHLDYFH---KLKKIFGNCTTI 354 (375)
T ss_dssp -TTCEEEEEECCCC--------CC-----HHHHHHHHHHHHEEEEEEEEEEEETTSCHHH---HHHHHHSCCEEE
T ss_pred -CCCeeEEEECCCcccC-cccCHH-----HHHHHHHHHHHhCCCCcEEEEEEECCcCHHH---HHHHhcCCEEEE
Confidence 2678999999865432 122111 1235678899999999999997666666654 456667777765
No 73
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.93 E-value=1.9e-09 Score=113.23 Aligned_cols=95 Identities=14% Similarity=0.085 Sum_probs=70.4
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC--------CC--------------------CCCceEEEccCC
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI--------AP--------------------IRGAVSLEQDIT 92 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~--------~~--------------------i~~V~~i~gDIt 92 (832)
.++.+|||+|||+|..+..|+.. +..|+|||+++. .. .++|.++++|++
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~---G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~ 143 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADR---GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIF 143 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHT---TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTT
T ss_pred CCCCeEEEeCCCCcHHHHHHHHC---CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccc
Confidence 47889999999999999999986 569999999962 11 146899999999
Q ss_pred ChhHHHHHHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 93 KPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 93 ~~~~~~~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
++.. . ..+.||+|++.++... .... ....++..+.++|+|||+|++
T Consensus 144 ~l~~--------~--~~~~FD~V~~~~~l~~----l~~~-----~~~~~l~~~~~~LkpGG~l~l 189 (252)
T 2gb4_A 144 DLPR--------A--NIGKFDRIWDRGALVA----INPG-----DHDRYADIILSLLRKEFQYLV 189 (252)
T ss_dssp TGGG--------G--CCCCEEEEEESSSTTT----SCGG-----GHHHHHHHHHHTEEEEEEEEE
T ss_pred cCCc--------c--cCCCEEEEEEhhhhhh----CCHH-----HHHHHHHHHHHHcCCCeEEEE
Confidence 8541 1 1167999999865322 1111 123567789999999999964
No 74
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.93 E-value=7.3e-09 Score=107.46 Aligned_cols=97 Identities=15% Similarity=0.205 Sum_probs=71.2
Q ss_pred CCCEEEEEcCCcCHHHHHHHHh---CCCCCEEEEEeCCCC-CC-----CCCceEEEccCCChhHHHHHHHHHhhccCCcc
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQR---VPVGSLVLGLDLVPI-AP-----IRGAVSLEQDITKPECRARVKKVMEEHGVRAF 112 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~---~p~~~~ViGVDLsp~-~~-----i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~F 112 (832)
++.+|||||||+|+++..++.. +.+++.|+|||+++. .. .++|.++++|+.+.... ..+. ..+|
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l----~~~~---~~~f 153 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTF----EHLR---EMAH 153 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGG----GGGS---SSCS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHH----Hhhc---cCCC
Confidence 4679999999999999999987 455789999999983 22 25799999999874210 0111 1368
Q ss_pred cEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHh-hcccCcEEEEEE
Q 003302 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQ-FLAPKGTFVTKV 159 (832)
Q Consensus 113 DlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~-~LkpGG~fV~KV 159 (832)
|+|+++++. . + ...+|..+.+ +|+|||+||+..
T Consensus 154 D~I~~d~~~------~-~-------~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 154 PLIFIDNAH------A-N-------TFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp SEEEEESSC------S-S-------HHHHHHHHHHHTCCTTCEEEECS
T ss_pred CEEEECCch------H-h-------HHHHHHHHHHhhCCCCCEEEEEe
Confidence 999998741 0 1 1346677886 999999999854
No 75
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.92 E-value=1e-09 Score=111.73 Aligned_cols=98 Identities=21% Similarity=0.236 Sum_probs=73.3
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC---------CCCCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI---------APIRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~---------~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
+.++.+|||||||+|.++..++..+++.+.|+|||+++. ...+++.++++|+.+.... ... ..
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-------~~~-~~ 142 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEY-------RAL-VP 142 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGG-------TTT-CC
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchh-------hcc-cC
Confidence 467889999999999999999988765679999999972 1236899999999874311 111 15
Q ss_pred cccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEE
Q 003302 111 AFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTK 158 (832)
Q Consensus 111 ~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~K 158 (832)
.||+|+++.+. .+. ...++..+.++|+|||+|++.
T Consensus 143 ~~D~v~~~~~~-------~~~------~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 143 KVDVIFEDVAQ-------PTQ------AKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp CEEEEEECCCS-------TTH------HHHHHHHHHHHEEEEEEEEEE
T ss_pred CceEEEECCCC-------HhH------HHHHHHHHHHhcCCCCEEEEE
Confidence 78999998641 111 123367889999999999986
No 76
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.92 E-value=5.8e-09 Score=112.22 Aligned_cols=142 Identities=12% Similarity=0.126 Sum_probs=94.4
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC----------------CCCCceEEEccCCChhHHHHHHHHH
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA----------------PIRGAVSLEQDITKPECRARVKKVM 104 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~----------------~i~~V~~i~gDIt~~~~~~~l~~~L 104 (832)
.++.+|||||||+|+++..++++.+ ...|++||+++.. ..+++.++++|+....
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l--------- 151 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKN-VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFV--------- 151 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTT-CCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC-----------
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHH---------
Confidence 4568999999999999999988644 5699999999831 1357999999987631
Q ss_pred hhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEc----CCCCHHHHHHHHHHcccceE
Q 003302 105 EEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVF----RSQDYSSVLYCLKQLFEKVE 180 (832)
Q Consensus 105 ~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVF----rs~d~~~ll~~L~~~F~~V~ 180 (832)
.. ..+.||+|++|+....+.. ... .....+..+.++|+|||+|++... ....+..++..++..|..|.
T Consensus 152 ~~-~~~~fDvIi~D~~~p~~~~---~~l----~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~F~~v~ 223 (294)
T 3adn_A 152 NQ-TSQTFDVIISDCTDPIGPG---ESL----FTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVG 223 (294)
T ss_dssp -C-CCCCEEEEEECC-----------------CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHHCSEEE
T ss_pred hh-cCCCccEEEECCCCccCcc---hhc----cHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHHCCCeE
Confidence 11 1267999999975322110 000 013567788999999999999652 22335667777888898877
Q ss_pred Eec-CCCCCCCCcceeEEEee
Q 003302 181 VDK-PAASRSASAEIYLLGIK 200 (832)
Q Consensus 181 ~~K-P~sSR~~SaEiyvVc~g 200 (832)
.+- +..+.++..-.|++|..
T Consensus 224 ~~~~~vp~~p~g~~~f~~as~ 244 (294)
T 3adn_A 224 FYQAAIPTYYGGIMTFAWATD 244 (294)
T ss_dssp EEEEECTTSSSSEEEEEEEES
T ss_pred EEEEEecccCCCceEEEEEeC
Confidence 543 23334445556777754
No 77
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.92 E-value=1.1e-09 Score=115.09 Aligned_cols=108 Identities=20% Similarity=0.221 Sum_probs=79.2
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-C-----CCCCceEEEccCCChhHHHHHHHHHhhccCCccc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-A-----PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFD 113 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-~-----~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FD 113 (832)
+.++.+|||||||+|.++..++. .++.|+|||+++. . ..+++.++++|+...+ + .+.||
T Consensus 55 ~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~--------~----~~~fD 119 (279)
T 3ccf_A 55 PQPGEFILDLGCGTGQLTEKIAQ---SGAEVLGTDNAATMIEKARQNYPHLHFDVADARNFR--------V----DKPLD 119 (279)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHH---TTCEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCC--------C----SSCEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHhhCCCCEEEECChhhCC--------c----CCCcC
Confidence 35788999999999999999988 3579999999972 1 2468999999998743 1 16789
Q ss_pred EEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHHHH
Q 003302 114 LVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLK 173 (832)
Q Consensus 114 lVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~L~ 173 (832)
+|++.... .|..+. ..+|..+.++|+|||+|++.++.......+...+.
T Consensus 120 ~v~~~~~l----~~~~d~-------~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~ 168 (279)
T 3ccf_A 120 AVFSNAML----HWVKEP-------EAAIASIHQALKSGGRFVAEFGGKGNIKYILEALY 168 (279)
T ss_dssp EEEEESCG----GGCSCH-------HHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHH
T ss_pred EEEEcchh----hhCcCH-------HHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHH
Confidence 99997642 232221 35678899999999999997765544444444433
No 78
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.92 E-value=6.1e-09 Score=105.92 Aligned_cols=97 Identities=20% Similarity=0.170 Sum_probs=70.2
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-C-----C----CCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-A-----P----IRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-~-----~----i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
.++.+|||||||+|.++..++.. +..|+|||+++. . . -.++.++++|+.+.. + . +
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~--------~---~-~ 100 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPK---FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN--------I---N-R 100 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGG---SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC--------C---S-C
T ss_pred CCCCeEEEeCCCCCHHHHHHHHC---CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCC--------c---c-C
Confidence 36789999999999999999887 458999999972 1 0 116889999987642 1 1 6
Q ss_pred cccEEEeCC-CCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEc
Q 003302 111 AFDLVLHDG-SPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVF 160 (832)
Q Consensus 111 ~FDlVlsDg-apnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVF 160 (832)
.||+|++.. ... +..+ ......+|..+.++|+|||+|++.++
T Consensus 101 ~fD~v~~~~~~l~----~~~~----~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 101 KFDLITCCLDSTN----YIID----SDDLKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp CEEEEEECTTGGG----GCCS----HHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CceEEEEcCcccc----ccCC----HHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 789999974 321 1111 11235678889999999999998543
No 79
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=98.92 E-value=2.4e-09 Score=106.09 Aligned_cols=100 Identities=23% Similarity=0.116 Sum_probs=71.3
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-C----------CCCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-A----------PIRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-~----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
.++.+|||||||+|.++..++.. + ...|+|||+++. . .+.++.++++|+.+.. ..+ ..
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~------~~~---~~ 111 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR-G-AASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVV------AAG---TT 111 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHH------HHC---CS
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC-C-CCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHH------hhc---cC
Confidence 46789999999999999977764 2 458999999972 1 3467999999987532 111 12
Q ss_pred CcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHh--hcccCcEEEEEEcC
Q 003302 110 RAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQ--FLAPKGTFVTKVFR 161 (832)
Q Consensus 110 ~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~--~LkpGG~fV~KVFr 161 (832)
+.||+|++|++.. +.. .....++..+.+ +|+|||.|++....
T Consensus 112 ~~fD~i~~~~p~~----~~~------~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 112 SPVDLVLADPPYN----VDS------ADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp SCCSEEEECCCTT----SCH------HHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred CCccEEEECCCCC----cch------hhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 6789999997532 111 123456667777 99999999996543
No 80
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.92 E-value=1.2e-09 Score=106.42 Aligned_cols=115 Identities=18% Similarity=0.335 Sum_probs=83.8
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----------CCC-CCceEEEccCCChhHHHHHHHHHhhc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----------API-RGAVSLEQDITKPECRARVKKVMEEH 107 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----------~~i-~~V~~i~gDIt~~~~~~~l~~~L~~~ 107 (832)
+.++.+|||+|||+|.++..++... ..|+|+|+++. ..+ +++.++++|+.+. +..
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~---------~~~- 97 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEA---------LCK- 97 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHH---------HTT-
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHh---------ccc-
Confidence 4678899999999999999998875 69999999962 123 5788889887541 111
Q ss_pred cCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHHHHHc-ccceEEec
Q 003302 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL-FEKVEVDK 183 (832)
Q Consensus 108 ~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~L~~~-F~~V~~~K 183 (832)
.+.||+|++++... + ...++..+.++|+|||+|++..+.......+...+..+ | .+....
T Consensus 98 -~~~~D~v~~~~~~~--------~------~~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~-~~~~~~ 158 (192)
T 1l3i_A 98 -IPDIDIAVVGGSGG--------E------LQEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGF-DVNITE 158 (192)
T ss_dssp -SCCEEEEEESCCTT--------C------HHHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTC-CCEEEE
T ss_pred -CCCCCEEEECCchH--------H------HHHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCC-ceEEEE
Confidence 14689999986421 0 13567788999999999999776655566667777765 6 555543
No 81
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.91 E-value=1.9e-09 Score=108.85 Aligned_cols=96 Identities=11% Similarity=-0.020 Sum_probs=70.6
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCC-CC-------C---------------CCCceEEEccCCChhH
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVP-IA-------P---------------IRGAVSLEQDITKPEC 96 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp-~~-------~---------------i~~V~~i~gDIt~~~~ 96 (832)
+.++.+|||+|||+|..+..|+.. +..|+|||+++ |. . .+++.++++|++++..
T Consensus 20 ~~~~~~vLD~GCG~G~~~~~la~~---g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~ 96 (203)
T 1pjz_A 20 VVPGARVLVPLCGKSQDMSWLSGQ---GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTA 96 (203)
T ss_dssp CCTTCEEEETTTCCSHHHHHHHHH---CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTH
T ss_pred cCCCCEEEEeCCCCcHhHHHHHHC---CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCc
Confidence 357889999999999999999987 46999999997 21 1 2579999999998652
Q ss_pred HHHHHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 97 RARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 97 ~~~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
.. . ++||+|++.++.. +... .....++..+.++|+|||++++
T Consensus 97 ~~-------~---~~fD~v~~~~~l~----~l~~-----~~~~~~l~~~~r~LkpgG~~~l 138 (203)
T 1pjz_A 97 RD-------I---GHCAAFYDRAAMI----ALPA-----DMRERYVQHLEALMPQACSGLL 138 (203)
T ss_dssp HH-------H---HSEEEEEEESCGG----GSCH-----HHHHHHHHHHHHHSCSEEEEEE
T ss_pred cc-------C---CCEEEEEECcchh----hCCH-----HHHHHHHHHHHHHcCCCcEEEE
Confidence 10 0 4689999876421 1111 1234577889999999999444
No 82
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.91 E-value=7.6e-10 Score=113.63 Aligned_cols=106 Identities=13% Similarity=0.202 Sum_probs=73.6
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----------CCCCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----------APIRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----------~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
.++.+|||||||+|.++..++...| +..|+|||+++- ..+.+|.++++|+.+. +...+..
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~p-~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~-----l~~~~~~--- 103 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDRP-EQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEV-----LHKMIPD--- 103 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHH-----HHHHSCT---
T ss_pred CCCCeEEEEeeeChHHHHHHHHHCC-CCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHH-----HHHHcCC---
Confidence 3678999999999999999999876 679999999962 1356899999998752 1112332
Q ss_pred CcccEEEeCCCCCCCCCchhH-HhHHhHHHHHHHHHHHhhcccCcEEEEEE
Q 003302 110 RAFDLVLHDGSPNVGGAWAQE-AMSQNALVIDSVKLATQFLAPKGTFVTKV 159 (832)
Q Consensus 110 ~~FDlVlsDgapnv~g~w~~D-~~~q~~L~~~aLk~A~~~LkpGG~fV~KV 159 (832)
+.||+|+++.++. |... +..........+..+.++|+|||+|++.+
T Consensus 104 ~~~d~v~~~~~~p----~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 104 NSLRMVQLFFPDP----WHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp TCEEEEEEESCCC----CCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CChheEEEeCCCC----ccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 6789999975321 2111 10000001246778899999999999844
No 83
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.91 E-value=2.3e-09 Score=108.62 Aligned_cols=98 Identities=12% Similarity=0.135 Sum_probs=71.7
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----------CCCC-CceEEEccCCChhHHHHHHHHHhhcc
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----------APIR-GAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----------~~i~-~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
.++.+|||||||+|+++.+++..+|.++.|+|||+++. ..+. ++.++++|+.+.. ..+....
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------~~~~~~~ 130 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSL------QQIENEK 130 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHH------HHHHHTT
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH------HHHHhcC
Confidence 46789999999999999999999886789999999972 1333 4899999986421 1122111
Q ss_pred CCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEE
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTK 158 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~K 158 (832)
.+.||+|++|+... . ....+..+.++|+|||+|++.
T Consensus 131 ~~~fD~v~~d~~~~--------~------~~~~l~~~~~~L~pgG~lv~~ 166 (223)
T 3duw_A 131 YEPFDFIFIDADKQ--------N------NPAYFEWALKLSRPGTVIIGD 166 (223)
T ss_dssp CCCCSEEEECSCGG--------G------HHHHHHHHHHTCCTTCEEEEE
T ss_pred CCCcCEEEEcCCcH--------H------HHHHHHHHHHhcCCCcEEEEe
Confidence 14689999996411 1 124567788999999999874
No 84
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.91 E-value=3.7e-09 Score=108.98 Aligned_cols=96 Identities=15% Similarity=0.209 Sum_probs=73.7
Q ss_pred CCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCC-CceEEEccCCChhHHHHHHHHHhh
Q 003302 39 FLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIR-GAVSLEQDITKPECRARVKKVMEE 106 (832)
Q Consensus 39 fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~-~V~~i~gDIt~~~~~~~l~~~L~~ 106 (832)
-+.++.+|||||||+|.++..++...+ +.|+|||+++.. .++ ++.++++|+.+.+ +.
T Consensus 43 ~~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--------~~- 111 (257)
T 3f4k_A 43 ELTDDAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLP--------FQ- 111 (257)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCS--------SC-
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCC--------CC-
Confidence 356788999999999999999999875 399999999721 233 3899999997753 11
Q ss_pred ccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEE
Q 003302 107 HGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKV 159 (832)
Q Consensus 107 ~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KV 159 (832)
.+.||+|++.+.... . + ...+|..+.++|+|||+|++..
T Consensus 112 --~~~fD~v~~~~~l~~----~-~-------~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 112 --NEELDLIWSEGAIYN----I-G-------FERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp --TTCEEEEEEESCSCC----C-C-------HHHHHHHHHTTEEEEEEEEEEE
T ss_pred --CCCEEEEEecChHhh----c-C-------HHHHHHHHHHHcCCCcEEEEEE
Confidence 267899999875322 1 2 1356788999999999999865
No 85
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.91 E-value=4.5e-09 Score=111.87 Aligned_cols=105 Identities=16% Similarity=0.096 Sum_probs=76.3
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCC-CceEEEccCCChhHHHHHHHHHhhc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIR-GAVSLEQDITKPECRARVKKVMEEH 107 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~-~V~~i~gDIt~~~~~~~l~~~L~~~ 107 (832)
+.++.+|||||||+|.++..++...+ +.|+|||+++.. .++ ++.++++|+.+. .
T Consensus 70 ~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----------~- 135 (302)
T 3hem_A 70 LEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF-----------D- 135 (302)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC-----------C-
T ss_pred CCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc-----------C-
Confidence 47889999999999999999998865 689999999721 233 688999998753 1
Q ss_pred cCCcccEEEeCCCCCCCCCchhHHhH--HhHHHHHHHHHHHhhcccCcEEEEEEcCCCC
Q 003302 108 GVRAFDLVLHDGSPNVGGAWAQEAMS--QNALVIDSVKLATQFLAPKGTFVTKVFRSQD 164 (832)
Q Consensus 108 ~~~~FDlVlsDgapnv~g~w~~D~~~--q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d 164 (832)
+.||+|++..... +..+... .......+|..+.++|+|||+|++..+....
T Consensus 136 --~~fD~v~~~~~~~----~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 188 (302)
T 3hem_A 136 --EPVDRIVSLGAFE----HFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPD 188 (302)
T ss_dssp --CCCSEEEEESCGG----GTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCC
T ss_pred --CCccEEEEcchHH----hcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccC
Confidence 7789999986432 1111000 0012346778899999999999997765544
No 86
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.91 E-value=1.1e-09 Score=115.84 Aligned_cols=99 Identities=15% Similarity=0.110 Sum_probs=75.7
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC---------CC-CCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA---------PI-RGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~---------~i-~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
+.++.+|||+|||+|.|+..++...|.++.|+|||+++.. .. +++.++++|+.+.. + .
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~--------~----~ 87 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIE--------L----N 87 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCC--------C----S
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcC--------c----C
Confidence 4678899999999999999999988766899999999731 12 27999999998743 1 1
Q ss_pred CcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcC
Q 003302 110 RAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFR 161 (832)
Q Consensus 110 ~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFr 161 (832)
+.||+|++..... +..+ ...+|..+.++|+|||+|++..+.
T Consensus 88 ~~fD~v~~~~~l~----~~~~-------~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 88 DKYDIAICHAFLL----HMTT-------PETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp SCEEEEEEESCGG----GCSS-------HHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCeeEEEECChhh----cCCC-------HHHHHHHHHHHcCCCCEEEEEecc
Confidence 6789999986422 1111 135678899999999999985543
No 87
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.91 E-value=3.2e-09 Score=108.90 Aligned_cols=98 Identities=17% Similarity=0.189 Sum_probs=73.2
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC---------CCCCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI---------APIRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~---------~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
+.++.+|||||||+|.++..++...+ .+.|+|||+++. ...+++.++++|+..+... +. .. +
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~------~~-~~-~ 142 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEY------AN-IV-E 142 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGG------TT-TS-C
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccc------cc-cC-c
Confidence 46789999999999999999999987 679999999972 1236899999999874210 01 11 5
Q ss_pred cccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEE
Q 003302 111 AFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKV 159 (832)
Q Consensus 111 ~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KV 159 (832)
.||+|+++.+. .. ....++..+.++|+|||+|++.+
T Consensus 143 ~~D~v~~~~~~-------~~------~~~~~l~~~~~~LkpgG~l~i~~ 178 (230)
T 1fbn_A 143 KVDVIYEDVAQ-------PN------QAEILIKNAKWFLKKGGYGMIAI 178 (230)
T ss_dssp CEEEEEECCCS-------TT------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cEEEEEEecCC-------hh------HHHHHHHHHHHhCCCCcEEEEEE
Confidence 78999987421 11 12345778899999999999863
No 88
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.90 E-value=4.3e-09 Score=108.44 Aligned_cols=95 Identities=17% Similarity=0.208 Sum_probs=72.7
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-C----------CC-CCceEEEccCCChhHHHHHHHHHhhc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-A----------PI-RGAVSLEQDITKPECRARVKKVMEEH 107 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-~----------~i-~~V~~i~gDIt~~~~~~~l~~~L~~~ 107 (832)
+.++.+|||||||+|.++..++... ++.|+|||+++- . .+ +++.++++|+.+.. +
T Consensus 34 ~~~~~~VLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~--- 100 (256)
T 1nkv_A 34 MKPGTRILDLGSGSGEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYV--------A--- 100 (256)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCC--------C---
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCC--------c---
Confidence 5788999999999999999999886 458999999972 1 23 47999999998743 1
Q ss_pred cCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEE
Q 003302 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKV 159 (832)
Q Consensus 108 ~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KV 159 (832)
.+.||+|++.++.. +..+ ...+|..+.++|+|||+|++..
T Consensus 101 -~~~fD~V~~~~~~~----~~~~-------~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 101 -NEKCDVAACVGATW----IAGG-------FAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp -SSCEEEEEEESCGG----GTSS-------SHHHHHHHTTSEEEEEEEEEEE
T ss_pred -CCCCCEEEECCChH----hcCC-------HHHHHHHHHHHcCCCeEEEEec
Confidence 16789999965421 1111 2456788999999999999854
No 89
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.90 E-value=7.9e-09 Score=105.28 Aligned_cols=97 Identities=21% Similarity=0.202 Sum_probs=70.1
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-C---------CCCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-A---------PIRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-~---------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
+.++.+|||||||+|.++..++.. ..|+|||+++. . .-.++.++++|+.+.. + .
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~--------~----~ 94 (243)
T 3d2l_A 31 VEPGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELE--------L----P 94 (243)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCC--------C----S
T ss_pred cCCCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcC--------C----C
Confidence 456789999999999999888765 58999999972 1 1246889999987642 1 1
Q ss_pred CcccEEEeCC-CCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEc
Q 003302 110 RAFDLVLHDG-SPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVF 160 (832)
Q Consensus 110 ~~FDlVlsDg-apnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVF 160 (832)
+.||+|++.+ ..+ |..+ ......+|..+.++|+|||+|++.++
T Consensus 95 ~~fD~v~~~~~~~~----~~~~----~~~~~~~l~~~~~~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 95 EPVDAITILCDSLN----YLQT----EADVKQTFDSAARLLTDGGKLLFDVH 138 (243)
T ss_dssp SCEEEEEECTTGGG----GCCS----HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCcCEEEEeCCchh----hcCC----HHHHHHHHHHHHHhcCCCeEEEEEcC
Confidence 6789999864 211 1111 12235678889999999999998553
No 90
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.90 E-value=9.4e-10 Score=115.02 Aligned_cols=105 Identities=18% Similarity=0.205 Sum_probs=77.9
Q ss_pred hhhhhcCCCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----------CCCCCceEEEccCCChhHHHHH
Q 003302 32 QLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----------APIRGAVSLEQDITKPECRARV 100 (832)
Q Consensus 32 qi~~kf~fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----------~~i~~V~~i~gDIt~~~~~~~l 100 (832)
++......+.++.+|||||||+|.++..++...| ++.|+|||+++. ..++++.++++|+....
T Consensus 27 ~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~----- 100 (276)
T 3mgg_A 27 KLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNP-DAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLP----- 100 (276)
T ss_dssp HHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCC-----
T ss_pred HHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCC-----
Confidence 3333344567899999999999999999999865 579999999972 13467999999998643
Q ss_pred HHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEE
Q 003302 101 KKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKV 159 (832)
Q Consensus 101 ~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KV 159 (832)
+. .+.||+|++..... +..+. ..+|..+.++|+|||+|++..
T Consensus 101 ---~~---~~~fD~v~~~~~l~----~~~~~-------~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 101 ---FE---DSSFDHIFVCFVLE----HLQSP-------EEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp ---SC---TTCEEEEEEESCGG----GCSCH-------HHHHHHHHHHEEEEEEEEEEE
T ss_pred ---CC---CCCeeEEEEechhh----hcCCH-------HHHHHHHHHHcCCCcEEEEEE
Confidence 11 26789999976421 22221 256778899999999999854
No 91
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.90 E-value=2.3e-09 Score=113.91 Aligned_cols=101 Identities=13% Similarity=0.116 Sum_probs=74.6
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-------------CCCCceEEEccCCChhHHHHHHHHHhhc
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-------------PIRGAVSLEQDITKPECRARVKKVMEEH 107 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-------------~i~~V~~i~gDIt~~~~~~~l~~~L~~~ 107 (832)
.++.+|||||||+|.++..++..++..+.|+|||+++.. ..+++.++++|+.+..... ....
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~-----~~~~ 109 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLG-----ADSV 109 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGC-----TTTT
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccc-----cccc
Confidence 578999999999999999999877457899999999721 1468999999998854210 0000
Q ss_pred cCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEE
Q 003302 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTK 158 (832)
Q Consensus 108 ~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~K 158 (832)
..+.||+|++.... +|. + ...+|..+.++|+|||+|++.
T Consensus 110 ~~~~fD~V~~~~~l----~~~-~-------~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 110 DKQKIDMITAVECA----HWF-D-------FEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp TSSCEEEEEEESCG----GGS-C-------HHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCCeeEEeHhhHH----HHh-C-------HHHHHHHHHHhcCCCcEEEEE
Confidence 01578999998642 222 2 235678899999999999883
No 92
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.90 E-value=3.1e-09 Score=113.46 Aligned_cols=134 Identities=10% Similarity=0.108 Sum_probs=85.8
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----------CCCCC-ceEEEccCCChhHHHHHHHHHhhccC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----------APIRG-AVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----------~~i~~-V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
++.+|||||||+|.++..++.. | ++.|+|||+++- ..+.+ +.++++|+.+.. .
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~-~-~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~---------~---- 187 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF-S-DAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPF---------K---- 187 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH-S-SCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGG---------G----
T ss_pred CCCEEEEEeCchhHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhc---------c----
Confidence 5679999999999999999998 4 679999999962 13443 899999998631 1
Q ss_pred Ccc---cEEEeCCCCCCCCC-------chhHHh-HHhHHHHHHHHHHH-hhcccCcEEEEEEcCCCCHHHHHHHHHHccc
Q 003302 110 RAF---DLVLHDGSPNVGGA-------WAQEAM-SQNALVIDSVKLAT-QFLAPKGTFVTKVFRSQDYSSVLYCLKQLFE 177 (832)
Q Consensus 110 ~~F---DlVlsDgapnv~g~-------w~~D~~-~q~~L~~~aLk~A~-~~LkpGG~fV~KVFrs~d~~~ll~~L~~~F~ 177 (832)
+.| |+|++|++....+. |.+... ....--+..++.+. +.|+|||+|++.+ .......+.. +|.
T Consensus 188 ~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~-~~~q~~~v~~----~~~ 262 (284)
T 1nv8_A 188 EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEI-GEDQVEELKK----IVS 262 (284)
T ss_dssp GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEEC-CTTCHHHHTT----TST
T ss_pred cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEE-CchHHHHHHH----HHH
Confidence 356 99999975321111 111100 00000124567778 9999999999854 3333333333 343
Q ss_pred ceEEecCCCCCCCCcceeEEEe
Q 003302 178 KVEVDKPAASRSASAEIYLLGI 199 (832)
Q Consensus 178 ~V~~~KP~sSR~~SaEiyvVc~ 199 (832)
...+.++.+.+ +++|++.
T Consensus 263 ~~~~~~D~~g~----~R~~~~~ 280 (284)
T 1nv8_A 263 DTVFLKDSAGK----YRFLLLN 280 (284)
T ss_dssp TCEEEECTTSS----EEEEEEE
T ss_pred hCCeecccCCC----ceEEEEE
Confidence 33667777766 3666654
No 93
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.89 E-value=1.5e-09 Score=112.71 Aligned_cols=96 Identities=17% Similarity=0.139 Sum_probs=72.6
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCC-CC----------CCCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVP-IA----------PIRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp-~~----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
.++.+|||||||+|.++..++... +.|+|||+++ +. .++++.++++|+...+ +. .
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~--------~~---~ 101 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP--------FT---D 101 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC--------SC---T
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCC--------CC---C
Confidence 578899999999999999998874 3999999997 21 2467999999998753 11 2
Q ss_pred CcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcC
Q 003302 110 RAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFR 161 (832)
Q Consensus 110 ~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFr 161 (832)
+.||+|++.... .|..+. ..+|..+.++|+|||+|++..+.
T Consensus 102 ~~fD~V~~~~~l----~~~~d~-------~~~l~~~~r~LkpgG~l~~~~~~ 142 (260)
T 1vl5_A 102 ERFHIVTCRIAA----HHFPNP-------ASFVSEAYRVLKKGGQLLLVDNS 142 (260)
T ss_dssp TCEEEEEEESCG----GGCSCH-------HHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCEEEEEEhhhh----HhcCCH-------HHHHHHHHHHcCCCCEEEEEEcC
Confidence 678999998542 233332 35678899999999999986543
No 94
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.89 E-value=9.7e-09 Score=104.72 Aligned_cols=98 Identities=15% Similarity=0.267 Sum_probs=74.7
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC--------CCCCCceEEEccCCChhHHHHHHHHHhhccCCc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI--------APIRGAVSLEQDITKPECRARVKKVMEEHGVRA 111 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~--------~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~ 111 (832)
+.++.+|||||||+|.++..++.. +..|+|||+++. ...+++.++++|+.+.+ +. .+.
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~--------~~---~~~ 116 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRT---GYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLP--------FE---NEQ 116 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCS--------SC---TTC
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCC--------CC---CCC
Confidence 468899999999999999999987 569999999972 12467999999998753 11 267
Q ss_pred ccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCC
Q 003302 112 FDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRS 162 (832)
Q Consensus 112 FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs 162 (832)
||+|++..... +..+ ...+|..+.++|+|||.|++.++..
T Consensus 117 fD~v~~~~~l~----~~~~-------~~~~l~~~~~~L~pgG~l~i~~~~~ 156 (242)
T 3l8d_A 117 FEAIMAINSLE----WTEE-------PLRALNEIKRVLKSDGYACIAILGP 156 (242)
T ss_dssp EEEEEEESCTT----SSSC-------HHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred ccEEEEcChHh----hccC-------HHHHHHHHHHHhCCCeEEEEEEcCC
Confidence 89999976432 2222 1356788999999999999977544
No 95
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.89 E-value=4.6e-09 Score=104.74 Aligned_cols=94 Identities=15% Similarity=0.180 Sum_probs=70.4
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------C-CCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------P-IRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~-i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
.++ +|||||||+|.++..++.. ++..|+|||+++.. . .+++.++++|+.+.+ +.
T Consensus 43 ~~~-~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--------~~--- 108 (219)
T 3dlc_A 43 TAG-TCIDIGSGPGALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIP--------IE--- 108 (219)
T ss_dssp CEE-EEEEETCTTSHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCS--------SC---
T ss_pred CCC-EEEEECCCCCHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCC--------CC---
Confidence 445 9999999999999999988 35799999999621 2 246899999998743 11
Q ss_pred CCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEE
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKV 159 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KV 159 (832)
.+.||+|++..... +..+ ...+|..+.++|+|||.|++..
T Consensus 109 ~~~~D~v~~~~~l~----~~~~-------~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 109 DNYADLIVSRGSVF----FWED-------VATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp TTCEEEEEEESCGG----GCSC-------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccccEEEECchHh----hccC-------HHHHHHHHHHhCCCCCEEEEEe
Confidence 26789999986422 1111 2357788999999999999853
No 96
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.88 E-value=2e-09 Score=112.33 Aligned_cols=97 Identities=15% Similarity=0.202 Sum_probs=74.1
Q ss_pred CCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CC-CCceEEEccCCChhHHHHHHHHHhh
Q 003302 39 FLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PI-RGAVSLEQDITKPECRARVKKVMEE 106 (832)
Q Consensus 39 fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i-~~V~~i~gDIt~~~~~~~l~~~L~~ 106 (832)
.+.++.+|||||||+|.++..++.. ..+.|+|||+++.. .+ +++.++++|+.+.+ +.
T Consensus 43 ~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~- 111 (267)
T 3kkz_A 43 NLTEKSLIADIGCGTGGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLP--------FR- 111 (267)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHTT--CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC--------CC-
T ss_pred cCCCCCEEEEeCCCCCHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCC--------CC-
Confidence 3568899999999999999999987 35699999999731 23 45999999998743 11
Q ss_pred ccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEc
Q 003302 107 HGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVF 160 (832)
Q Consensus 107 ~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVF 160 (832)
.+.||+|++.+.... . + ...+|..+.++|+|||+|++..+
T Consensus 112 --~~~fD~i~~~~~~~~----~-~-------~~~~l~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 112 --NEELDLIWSEGAIYN----I-G-------FERGLNEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp --TTCEEEEEESSCGGG----T-C-------HHHHHHHHGGGEEEEEEEEEEEE
T ss_pred --CCCEEEEEEcCCcee----c-C-------HHHHHHHHHHHcCCCCEEEEEEe
Confidence 267899999875321 1 1 13567889999999999998653
No 97
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.88 E-value=1.3e-09 Score=110.78 Aligned_cols=100 Identities=12% Similarity=0.155 Sum_probs=73.7
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC------CCC-CceEEEccCCChhHHHHHHHHHhhccCCccc
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA------PIR-GAVSLEQDITKPECRARVKKVMEEHGVRAFD 113 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~------~i~-~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FD 113 (832)
.++.+|||||||+|.++..++... ..|+|||+++.. ..+ ++.++++|+.+.. ..+.||
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~~------------~~~~fD 105 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHF---NDITCVEASEEAISHAQGRLKDGITYIHSRFEDAQ------------LPRRYD 105 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTC---SCEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCC------------CSSCEE
T ss_pred cCCCcEEEECCCCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHcC------------cCCccc
Confidence 366789999999999999998763 379999999731 122 8999999987631 126789
Q ss_pred EEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHH-hhcccCcEEEEEEcCCCCHH
Q 003302 114 LVLHDGSPNVGGAWAQEAMSQNALVIDSVKLAT-QFLAPKGTFVTKVFRSQDYS 166 (832)
Q Consensus 114 lVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~-~~LkpGG~fV~KVFrs~d~~ 166 (832)
+|++..... +..+ ...+|+.+. ++|+|||+|++.++......
T Consensus 106 ~v~~~~~l~----~~~~-------~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~ 148 (250)
T 2p7i_A 106 NIVLTHVLE----HIDD-------PVALLKRINDDWLAEGGRLFLVCPNANAVS 148 (250)
T ss_dssp EEEEESCGG----GCSS-------HHHHHHHHHHTTEEEEEEEEEEEECTTCHH
T ss_pred EEEEhhHHH----hhcC-------HHHHHHHHHHHhcCCCCEEEEEcCChHHHH
Confidence 999976421 2222 135778899 99999999999776655443
No 98
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.87 E-value=2.6e-09 Score=103.54 Aligned_cols=115 Identities=11% Similarity=0.161 Sum_probs=81.9
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
+.++.+|||+|||+|.++..++. ....|+|+|+++.. .++++.++++|+.+. +..
T Consensus 33 ~~~~~~vLdiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~---------~~~-- 98 (183)
T 2yxd_A 33 LNKDDVVVDVGCGSGGMTVEIAK---RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDV---------LDK-- 98 (183)
T ss_dssp CCTTCEEEEESCCCSHHHHHHHT---TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHH---------GGG--
T ss_pred CCCCCEEEEeCCCCCHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCcccc---------ccC--
Confidence 35778999999999999999987 36799999999721 236788999998651 222
Q ss_pred CCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHHHHHcccceEEecCCC
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAA 186 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~L~~~F~~V~~~KP~s 186 (832)
+.||+|++++. .. ...++..+.++ |||.|++..+.......+...|..+...+..+.+..
T Consensus 99 -~~~D~i~~~~~------~~---------~~~~l~~~~~~--~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~ 158 (183)
T 2yxd_A 99 -LEFNKAFIGGT------KN---------IEKIIEILDKK--KINHIVANTIVLENAAKIINEFESRGYNVDAVNVFI 158 (183)
T ss_dssp -CCCSEEEECSC------SC---------HHHHHHHHHHT--TCCEEEEEESCHHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred -CCCcEEEECCc------cc---------HHHHHHHHhhC--CCCEEEEEecccccHHHHHHHHHHcCCeEEEEEeee
Confidence 56899999864 01 12345555666 999999977666666677777777654555554433
No 99
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.87 E-value=1.6e-09 Score=111.70 Aligned_cols=113 Identities=15% Similarity=0.203 Sum_probs=82.7
Q ss_pred hhHHHHHHHhhhhhcCCCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC------CCCCceEEEccCCChhH
Q 003302 23 RSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA------PIRGAVSLEQDITKPEC 96 (832)
Q Consensus 23 rsRaafKLiqi~~kf~fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~------~i~~V~~i~gDIt~~~~ 96 (832)
+.+.+..|+.. +. +.++.+|||||||+|.++..++...| ++.|+|||+++.. ..+++.++++|+.+..
T Consensus 18 ~~~~~~~l~~~---~~-~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~- 91 (259)
T 2p35_A 18 RTRPARDLLAQ---VP-LERVLNGYDLGCGPGNSTELLTDRYG-VNVITGIDSDDDMLEKAADRLPNTNFGKADLATWK- 91 (259)
T ss_dssp GGHHHHHHHTT---CC-CSCCSSEEEETCTTTHHHHHHHHHHC-TTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCC-
T ss_pred HHHHHHHHHHh---cC-CCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcC-
Confidence 44555555542 22 35678999999999999999998875 5689999999721 2568999999998742
Q ss_pred HHHHHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCC
Q 003302 97 RARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQ 163 (832)
Q Consensus 97 ~~~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~ 163 (832)
..+.||+|++.... .|..+ ...+|..+.++|+|||+|++.++...
T Consensus 92 -----------~~~~fD~v~~~~~l----~~~~~-------~~~~l~~~~~~L~pgG~l~~~~~~~~ 136 (259)
T 2p35_A 92 -----------PAQKADLLYANAVF----QWVPD-------HLAVLSQLMDQLESGGVLAVQMPDNL 136 (259)
T ss_dssp -----------CSSCEEEEEEESCG----GGSTT-------HHHHHHHHGGGEEEEEEEEEEEECCT
T ss_pred -----------ccCCcCEEEEeCch----hhCCC-------HHHHHHHHHHhcCCCeEEEEEeCCCC
Confidence 12678999997542 23322 23567889999999999999776543
No 100
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.87 E-value=2.7e-09 Score=110.07 Aligned_cols=100 Identities=11% Similarity=0.030 Sum_probs=69.6
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCC--C-------C------CCCCceEEEccCCChhHHHHHHHHHh
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVP--I-------A------PIRGAVSLEQDITKPECRARVKKVME 105 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp--~-------~------~i~~V~~i~gDIt~~~~~~~l~~~L~ 105 (832)
.++.+|||||||+|.++..++...+ ++.|+|||+++ | . .++++.++++|+.+++.
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~--------- 92 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQ-NTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPF--------- 92 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCT-TEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCG---------
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhh---------
Confidence 5788999999999999999987654 67999999994 4 1 24678999999987531
Q ss_pred hccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 106 EHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 106 ~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
.....||+|.++.+ |.............+|..+.++|+|||.|++
T Consensus 93 -~~~d~v~~i~~~~~------~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 93 -ELKNIADSISILFP------WGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp -GGTTCEEEEEEESC------CHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred -hccCeEEEEEEeCC------CcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 11244577766542 2221110000113567889999999999998
No 101
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.86 E-value=4e-09 Score=106.16 Aligned_cols=97 Identities=15% Similarity=0.121 Sum_probs=72.7
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-C-----CC-CCceEEEccCCChhHHHHHHHHHhhccCCccc
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-A-----PI-RGAVSLEQDITKPECRARVKKVMEEHGVRAFD 113 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-~-----~i-~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FD 113 (832)
.++.+|||||||+|.++..++.. +..|+|||+++. . .. .++.++++|+..... . +.||
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~-----------~-~~fD 108 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEV-----------P-TSID 108 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHT---TCEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCC-----------C-SCCS
T ss_pred cCCCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCC-----------C-CCeE
Confidence 47889999999999999999886 569999999972 1 12 379999999987531 1 6789
Q ss_pred EEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcC
Q 003302 114 LVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFR 161 (832)
Q Consensus 114 lVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFr 161 (832)
+|++..... +..+.. ...+|..+.++|+|||.|++..+.
T Consensus 109 ~v~~~~~l~----~~~~~~-----~~~~l~~~~~~LkpgG~l~i~~~~ 147 (220)
T 3hnr_A 109 TIVSTYAFH----HLTDDE-----KNVAIAKYSQLLNKGGKIVFADTI 147 (220)
T ss_dssp EEEEESCGG----GSCHHH-----HHHHHHHHHHHSCTTCEEEEEEEC
T ss_pred EEEECcchh----cCChHH-----HHHHHHHHHHhcCCCCEEEEEecc
Confidence 999986421 222211 134678899999999999997643
No 102
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.86 E-value=2.5e-09 Score=111.65 Aligned_cols=96 Identities=15% Similarity=0.154 Sum_probs=72.4
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----CCCCCceEEEccCCChhHHHHHHHHHhhccCCcccE
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----APIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDl 114 (832)
+.++.+|||||||+|.|+..++. .++.|+|||+++. ...+++.++++|+.+.+ +. .+.||+
T Consensus 32 ~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~--------~~---~~~fD~ 97 (261)
T 3ege_A 32 LPKGSVIADIGAGTGGYSVALAN---QGLFVYAVEPSIVMRQQAVVHPQVEWFTGYAENLA--------LP---DKSVDG 97 (261)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHT---TTCEEEEECSCHHHHHSSCCCTTEEEECCCTTSCC--------SC---TTCBSE
T ss_pred CCCCCEEEEEcCcccHHHHHHHh---CCCEEEEEeCCHHHHHHHHhccCCEEEECchhhCC--------CC---CCCEeE
Confidence 36788999999999999999987 3679999999972 12348999999998743 11 267899
Q ss_pred EEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcC
Q 003302 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFR 161 (832)
Q Consensus 115 VlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFr 161 (832)
|++..... +..+ ...+|..+.++|+ ||++++..+.
T Consensus 98 v~~~~~l~----~~~~-------~~~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 98 VISILAIH----HFSH-------LEKSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp EEEESCGG----GCSS-------HHHHHHHHHHHBC-SSCEEEEEEC
T ss_pred EEEcchHh----hccC-------HHHHHHHHHHHhC-CcEEEEEEcC
Confidence 99986421 1112 2457788999999 9988886654
No 103
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.86 E-value=1e-08 Score=110.53 Aligned_cols=92 Identities=13% Similarity=0.183 Sum_probs=70.2
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-C----------CCCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-A----------PIRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-~----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
+.++.+|||+|||||+++..++...+ ++.|+|||+++- . .+.+|.++++|+.+.+ .
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~-ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~----------d-- 186 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVY-GMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID----------G-- 186 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTT-CCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG----------G--
T ss_pred CCCcCEEEEECCCccHHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC----------C--
Confidence 57899999999999998865554544 679999999972 1 3467999999997632 2
Q ss_pred CCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEE
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKV 159 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KV 159 (832)
+.||+|++.+.. .+ ...++..+.++|+|||+|++..
T Consensus 187 -~~FDvV~~~a~~-------~d-------~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 187 -LEFDVLMVAALA-------EP-------KRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp -CCCSEEEECTTC-------SC-------HHHHHHHHHHHCCTTCEEEEEE
T ss_pred -CCcCEEEECCCc-------cC-------HHHHHHHHHHHcCCCcEEEEEc
Confidence 678999986531 11 1356778999999999999854
No 104
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.86 E-value=4.9e-09 Score=107.08 Aligned_cols=136 Identities=18% Similarity=0.147 Sum_probs=92.3
Q ss_pred CCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC---------C---CCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA---------P---IRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~---------~---i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
+.+|||||||+|.++..++. .+..|+|||+++.. . ..++.++++|+++.. ...
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------------~~~ 131 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMAS---PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR------------PTE 131 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCB---TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC------------CSS
T ss_pred CCCEEEeCCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC------------CCC
Confidence 35999999999999998875 36789999999721 1 134899999998743 125
Q ss_pred cccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCC----------CCHHHHHHHHHHc-ccce
Q 003302 111 AFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRS----------QDYSSVLYCLKQL-FEKV 179 (832)
Q Consensus 111 ~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs----------~d~~~ll~~L~~~-F~~V 179 (832)
.||+|++...... ... .....+|..+.++|+|||+|++..|.. .+...+..+|... |..+
T Consensus 132 ~fD~v~~~~~l~~----~~~-----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 202 (235)
T 3lcc_A 132 LFDLIFDYVFFCA----IEP-----EMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAV 202 (235)
T ss_dssp CEEEEEEESSTTT----SCG-----GGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEE
T ss_pred CeeEEEEChhhhc----CCH-----HHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEE
Confidence 7899999764321 111 012456788999999999999876643 1345666777665 7766
Q ss_pred EEec---CCCCCCCCcceeEEEeeccC
Q 003302 180 EVDK---PAASRSASAEIYLLGIKYKA 203 (832)
Q Consensus 180 ~~~K---P~sSR~~SaEiyvVc~gfk~ 203 (832)
.+.. +...| ...|.+..++++.-
T Consensus 203 ~~~~~~~~~~~~-~g~e~~~~~~~~~~ 228 (235)
T 3lcc_A 203 SVEENPHAIPTR-KGKEKLGRWKKINL 228 (235)
T ss_dssp EEEECTTCCTTT-TTSCEEEEEEESCC
T ss_pred EEEecCCccccc-cCHHHHhhhhhccc
Confidence 5532 22233 34678877777643
No 105
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.86 E-value=4.9e-09 Score=109.15 Aligned_cols=99 Identities=17% Similarity=0.207 Sum_probs=72.1
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-C----------CC-CCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-A----------PI-RGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-~----------~i-~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
.++.+|||||||+|.++..++..++.++.|+|||+++- . .+ .+|.++++|+.... ........
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l-----~~~~~~~~ 133 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTL-----HSLLNEGG 133 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHH-----HHHHHHHC
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH-----HHHhhccC
Confidence 35689999999999999999999877889999999983 2 22 36899999976521 11111101
Q ss_pred CCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEE
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTK 158 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~K 158 (832)
.+.||+|++|+.. .. ....+..+.++|+|||+||+.
T Consensus 134 ~~~fD~V~~d~~~--------~~------~~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 134 EHQFDFIFIDADK--------TN------YLNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp SSCEEEEEEESCG--------GG------HHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCEeEEEEcCCh--------HH------hHHHHHHHHHhcCCCeEEEEE
Confidence 2678999999641 11 123567788999999999984
No 106
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.86 E-value=8.6e-09 Score=103.70 Aligned_cols=108 Identities=19% Similarity=0.183 Sum_probs=79.6
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCCCCCCceEEEccCCChhHHHHHHHHHhhccCCcccEEEeCCC
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsDga 120 (832)
.++.+|||||||+|.++..++ ..|+|||+++. ++.++++|+.+.+ +. .+.||+|++...
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~----~~~~~~~d~~~~~--------~~---~~~fD~v~~~~~ 124 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR------NPVHCFDLASL----DPRVTVCDMAQVP--------LE---DESVDVAVFCLS 124 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC------SCEEEEESSCS----STTEEESCTTSCS--------CC---TTCEEEEEEESC
T ss_pred CCCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC----CceEEEeccccCC--------CC---CCCEeEEEEehh
Confidence 567899999999999987662 58999999987 6788999988743 11 267899999764
Q ss_pred CCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCC--CCHHHHHHHHHHc-ccceEE
Q 003302 121 PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRS--QDYSSVLYCLKQL-FEKVEV 181 (832)
Q Consensus 121 pnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs--~d~~~ll~~L~~~-F~~V~~ 181 (832)
.. | .+ ...+|..+.++|+|||+|++..+.. .+...+...|... |..+..
T Consensus 125 l~----~-~~-------~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 176 (215)
T 2zfu_A 125 LM----G-TN-------IRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVSK 176 (215)
T ss_dssp CC----S-SC-------HHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEEE
T ss_pred cc----c-cC-------HHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEEE
Confidence 32 2 11 2356778899999999999966543 3456677777765 765554
No 107
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.86 E-value=5.5e-09 Score=111.60 Aligned_cols=101 Identities=22% Similarity=0.228 Sum_probs=72.9
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCC-CceEEEccCCChhHHHHHHHHHhhc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIR-GAVSLEQDITKPECRARVKKVMEEH 107 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~-~V~~i~gDIt~~~~~~~l~~~L~~~ 107 (832)
+.++.+|||||||+|.++..++....+++.|+|||+++.. .+. ++.++++|+.+.. +
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~--- 184 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLD--------T--- 184 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCC--------C---
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCC--------c---
Confidence 5788999999999999999886333447799999999721 122 3889999998743 1
Q ss_pred cCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEc
Q 003302 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVF 160 (832)
Q Consensus 108 ~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVF 160 (832)
. +.||+|++++.. .+..+. .....++..+.++|+|||+|++..+
T Consensus 185 ~-~~fD~v~~~~~~----~~~~~~----~~~~~~l~~~~~~LkpgG~l~i~~~ 228 (305)
T 3ocj_A 185 R-EGYDLLTSNGLN----IYEPDD----ARVTELYRRFWQALKPGGALVTSFL 228 (305)
T ss_dssp C-SCEEEEECCSSG----GGCCCH----HHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred c-CCeEEEEECChh----hhcCCH----HHHHHHHHHHHHhcCCCeEEEEEec
Confidence 1 678999997632 122222 1123567889999999999998663
No 108
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.86 E-value=5.8e-09 Score=116.84 Aligned_cols=96 Identities=15% Similarity=0.136 Sum_probs=71.5
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-C-----------------CC--CCceEEEccCCChhHHHH
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-A-----------------PI--RGAVSLEQDITKPECRAR 99 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-~-----------------~i--~~V~~i~gDIt~~~~~~~ 99 (832)
+.++.+|||||||+|.++..++...+ ...|+|||+++. . .+ .+|.++++|+.+++...
T Consensus 171 l~~gd~VLDLGCGtG~l~l~lA~~~g-~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d- 248 (438)
T 3uwp_A 171 MTDDDLFVDLGSGVGQVVLQVAAATN-CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRE- 248 (438)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHCC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHH-
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCcccc-
Confidence 47899999999999999999988765 447999999961 0 12 56999999999875321
Q ss_pred HHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 100 VKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 100 l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
.+ ..||+|+++... +..+ ...+|..+++.|+|||.||+
T Consensus 249 ---~~-----~~aDVVf~Nn~~-----F~pd-------l~~aL~Ei~RvLKPGGrIVs 286 (438)
T 3uwp_A 249 ---RI-----ANTSVIFVNNFA-----FGPE-------VDHQLKERFANMKEGGRIVS 286 (438)
T ss_dssp ---HH-----HTCSEEEECCTT-----CCHH-------HHHHHHHHHTTSCTTCEEEE
T ss_pred ---cc-----CCccEEEEcccc-----cCch-------HHHHHHHHHHcCCCCcEEEE
Confidence 11 346999998532 2222 23456778899999999998
No 109
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.86 E-value=1.3e-08 Score=110.63 Aligned_cols=123 Identities=16% Similarity=0.105 Sum_probs=87.7
Q ss_pred CEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC--------C---CCCceEEEccCCChhHHHHHHHHHhhccCCcc
Q 003302 44 HAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA--------P---IRGAVSLEQDITKPECRARVKKVMEEHGVRAF 112 (832)
Q Consensus 44 ~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~--------~---i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~F 112 (832)
.+|||||||+|+++..+++..| +..|++||+++.. + .+++.++++|+... +.....+.|
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p-~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~---------l~~~~~~~f 160 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYP-QSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMV---------AESFTPASR 160 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHST-TCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHH---------HHTCCTTCE
T ss_pred CEEEEEECCcCHHHHHHHHHCC-CcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHH---------HhhccCCCC
Confidence 3899999999999999999776 5699999999721 1 35789999997642 111112679
Q ss_pred cEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCC---HHHHHHHHHHcccceEEec
Q 003302 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQD---YSSVLYCLKQLFEKVEVDK 183 (832)
Q Consensus 113 DlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d---~~~ll~~L~~~F~~V~~~K 183 (832)
|+|++|.....+. ..++. ....+..+.++|+|||+|++.+..... +..++..|...|..|.++.
T Consensus 161 DvIi~D~~~~~~~---~~~L~----t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~vF~~v~~~~ 227 (317)
T 3gjy_A 161 DVIIRDVFAGAIT---PQNFT----TVEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEVFEHVAVIA 227 (317)
T ss_dssp EEEEECCSTTSCC---CGGGS----BHHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHHCSEEEEEE
T ss_pred CEEEECCCCcccc---chhhh----HHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHHCCceEEEE
Confidence 9999996422111 11111 135677889999999999997764443 3456778888999988874
No 110
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.85 E-value=4.8e-09 Score=109.88 Aligned_cols=93 Identities=18% Similarity=0.075 Sum_probs=69.7
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
.++.+|||||||+|.++..++...| ++.|+|||+++-. .+.+|.++++|+.+... .....
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~--------~~~~~ 149 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRP-ELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAR--------EAGHR 149 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTT--------STTTT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhc--------ccccC
Confidence 4688999999999999999998876 6799999999721 35679999999865320 00011
Q ss_pred CcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 110 RAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 110 ~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
+.||+|+|....+ ...++..+.++|+|||+|++
T Consensus 150 ~~fD~I~s~a~~~---------------~~~ll~~~~~~LkpgG~l~~ 182 (249)
T 3g89_A 150 EAYARAVARAVAP---------------LCVLSELLLPFLEVGGAAVA 182 (249)
T ss_dssp TCEEEEEEESSCC---------------HHHHHHHHGGGEEEEEEEEE
T ss_pred CCceEEEECCcCC---------------HHHHHHHHHHHcCCCeEEEE
Confidence 6789999975210 12456778999999999987
No 111
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.85 E-value=2.9e-08 Score=110.32 Aligned_cols=122 Identities=21% Similarity=0.239 Sum_probs=82.3
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-C-CCCceEEEccCCChhHHHHHHHHHhhccCCcccEEEeC
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-P-IRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHD 118 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-~-i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsD 118 (832)
.++.+|||+|||+|+++..++++++....|+|||+++.. . ..++.++++|+.+.. ..+.||+|++|
T Consensus 38 ~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a~~~~~~~~D~~~~~------------~~~~fD~Ii~N 105 (421)
T 2ih2_A 38 PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLPPWAEGILADFLLWE------------PGEAFDLILGN 105 (421)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCCTTEEEEESCGGGCC------------CSSCEEEEEEC
T ss_pred CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhCCCCcEEeCChhhcC------------ccCCCCEEEEC
Confidence 346799999999999999999886446799999999843 2 257889999987632 12678999999
Q ss_pred CCCCCCCC---c---hhHHhHH------------hHHHHHHHHHHHhhcccCcEEEEEEcCC----CCHHHHHHHHHH
Q 003302 119 GSPNVGGA---W---AQEAMSQ------------NALVIDSVKLATQFLAPKGTFVTKVFRS----QDYSSVLYCLKQ 174 (832)
Q Consensus 119 gapnv~g~---w---~~D~~~q------------~~L~~~aLk~A~~~LkpGG~fV~KVFrs----~d~~~ll~~L~~ 174 (832)
++....+. + ..+.... ..+....+..+.++|+|||.+++.+..+ .....+...+..
T Consensus 106 PPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~l~~ 183 (421)
T 2ih2_A 106 PPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAR 183 (421)
T ss_dssp CCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHHHHHHHHH
T ss_pred cCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHHHHHHHHh
Confidence 86443221 0 1111110 0133466888999999999999855432 234555544443
No 112
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.85 E-value=4e-09 Score=105.08 Aligned_cols=110 Identities=18% Similarity=0.232 Sum_probs=77.9
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC---------CCCCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI---------APIRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~---------~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
+.++.+|||+|||+|.++..++...+ ..|+|||+++. ...+++.++++|+.+.. +. .+
T Consensus 40 ~~~~~~vLdiGcG~G~~~~~l~~~~~--~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~--------~~---~~ 106 (215)
T 2pxx_A 40 LRPEDRILVLGCGNSALSYELFLGGF--PNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLD--------FP---SA 106 (215)
T ss_dssp CCTTCCEEEETCTTCSHHHHHHHTTC--CCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCC--------SC---SS
T ss_pred cCCCCeEEEECCCCcHHHHHHHHcCC--CcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCC--------CC---CC
Confidence 47788999999999999999988733 28999999962 12367999999998742 11 26
Q ss_pred cccEEEeCCCCC-----CCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCC
Q 003302 111 AFDLVLHDGSPN-----VGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQ 163 (832)
Q Consensus 111 ~FDlVlsDgapn-----v~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~ 163 (832)
.||+|++++... .+..|.... ........+|..+.++|+|||+|++..+...
T Consensus 107 ~fD~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~ 163 (215)
T 2pxx_A 107 SFDVVLEKGTLDALLAGERDPWTVSS-EGVHTVDQVLSEVSRVLVPGGRFISMTSAAP 163 (215)
T ss_dssp CEEEEEEESHHHHHTTTCSCTTSCCH-HHHHHHHHHHHHHHHHEEEEEEEEEEESCCH
T ss_pred cccEEEECcchhhhcccccccccccc-chhHHHHHHHHHHHHhCcCCCEEEEEeCCCc
Confidence 789999976321 111232211 1122346788899999999999999776654
No 113
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.85 E-value=5.7e-09 Score=107.16 Aligned_cols=120 Identities=13% Similarity=0.046 Sum_probs=82.8
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-C-------C---CCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-A-------P---IRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-~-------~---i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
.++.+|||||||+|.++..++... ...|+|||+++. . . ..++.++++|+.+.. + ..
T Consensus 78 ~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~--------~---~~ 144 (241)
T 2ex4_A 78 TGTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFT--------P---EP 144 (241)
T ss_dssp CCCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCC--------C---CS
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcC--------C---CC
Confidence 368899999999999999888764 458999999972 1 1 224788899987642 1 11
Q ss_pred CcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCC--------------CHHHHHHHHHHc
Q 003302 110 RAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQ--------------DYSSVLYCLKQL 175 (832)
Q Consensus 110 ~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~--------------d~~~ll~~L~~~ 175 (832)
+.||+|+++.... +..+ ..+..+|..+.++|+|||+|++..+... +...+..+|...
T Consensus 145 ~~fD~v~~~~~l~----~~~~-----~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 215 (241)
T 2ex4_A 145 DSYDVIWIQWVIG----HLTD-----QHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSA 215 (241)
T ss_dssp SCEEEEEEESCGG----GSCH-----HHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHT
T ss_pred CCEEEEEEcchhh----hCCH-----HHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHc
Confidence 5799999985421 1111 1124678889999999999998654211 345666677665
Q ss_pred -ccceEEe
Q 003302 176 -FEKVEVD 182 (832)
Q Consensus 176 -F~~V~~~ 182 (832)
|..+.+.
T Consensus 216 Gf~~~~~~ 223 (241)
T 2ex4_A 216 GLSLLAEE 223 (241)
T ss_dssp TCCEEEEE
T ss_pred CCeEEEee
Confidence 7666654
No 114
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.84 E-value=6e-09 Score=116.05 Aligned_cols=118 Identities=24% Similarity=0.275 Sum_probs=86.4
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC----------CCCCceEEEccCCChhHHHHHHHHHhhccCCc
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA----------PIRGAVSLEQDITKPECRARVKKVMEEHGVRA 111 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~ 111 (832)
++.+|||||||+|.++..++.. +..|+|||+++.. .-..+.++++|+.+... . .+.
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~---g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~--------~---~~~ 298 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM---GAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALT--------E---EAR 298 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT---TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSC--------T---TCC
T ss_pred CCCEEEEEeeeCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccc--------c---CCC
Confidence 6789999999999999999987 4699999999731 11248899999987421 1 167
Q ss_pred ccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHHHHHcccceEEe
Q 003302 112 FDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVD 182 (832)
Q Consensus 112 FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~L~~~F~~V~~~ 182 (832)
||+|++|++...++.... .....++..+.++|+|||+|++.+.+...|.. .+...|..+..+
T Consensus 299 fD~Ii~npp~~~~~~~~~------~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~~~---~l~~~f~~v~~l 360 (381)
T 3dmg_A 299 FDIIVTNPPFHVGGAVIL------DVAQAFVNVAAARLRPGGVFFLVSNPFLKYEP---LLEEKFGAFQTL 360 (381)
T ss_dssp EEEEEECCCCCTTCSSCC------HHHHHHHHHHHHHEEEEEEEEEEECTTSCHHH---HHHHHHSCCEEE
T ss_pred eEEEEECCchhhcccccH------HHHHHHHHHHHHhcCcCcEEEEEEcCCCChHH---HHHHhhccEEEE
Confidence 899999987654332211 22346778899999999999997666656553 455667777765
No 115
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.84 E-value=3e-09 Score=109.38 Aligned_cols=98 Identities=17% Similarity=0.200 Sum_probs=73.6
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-C----------CCCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-A----------PIRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-~----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
+.++.+|||+|||+|.++..++... ..|+|||+++. . .++++.++++|+.+.+ +.
T Consensus 19 ~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--------~~--- 84 (239)
T 1xxl_A 19 CRAEHRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP--------FP--- 84 (239)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC--------SC---
T ss_pred cCCCCEEEEEccCcCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCC--------CC---
Confidence 4678999999999999999998874 48999999972 1 2467999999997643 11
Q ss_pred CCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCC
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRS 162 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs 162 (832)
.+.||+|++..... |..+ ...+|..+.++|+|||+|++..+..
T Consensus 85 ~~~fD~v~~~~~l~----~~~~-------~~~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 85 DDSFDIITCRYAAH----HFSD-------VRKAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp TTCEEEEEEESCGG----GCSC-------HHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred CCcEEEEEECCchh----hccC-------HHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 26789999985421 2222 2356788999999999999865543
No 116
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.83 E-value=1.2e-08 Score=111.56 Aligned_cols=107 Identities=19% Similarity=0.077 Sum_probs=77.7
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----------CCCCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----------APIRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----------~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
+.++..|||+|||+|.++..++...++...|+|+|+++. ..+.++.++++|+++... .
T Consensus 201 ~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~-----------~ 269 (354)
T 3tma_A 201 ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPR-----------F 269 (354)
T ss_dssp CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGG-----------T
T ss_pred CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCcc-----------c
Confidence 457889999999999999999987634679999999972 133478999999987531 1
Q ss_pred CCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEc
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVF 160 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVF 160 (832)
...||+|++|++.. ....+......+...++..+.++|+|||++++.+.
T Consensus 270 ~~~~D~Ii~npPyg---~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 270 FPEVDRILANPPHG---LRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp CCCCSEEEECCCSC---C----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred cCCCCEEEECCCCc---CccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 25579999998632 22222122234556788889999999999998543
No 117
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.83 E-value=7.2e-09 Score=109.08 Aligned_cols=97 Identities=16% Similarity=0.189 Sum_probs=72.8
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-C----------CC-CCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-A----------PI-RGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-~----------~i-~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
.++.+|||||||+|.++..++.. +..|+|||+++. . .+ +++.++++|+.+... + .
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-------~---~ 133 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAER---GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVAS-------H---L 133 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGG-------G---C
T ss_pred CCCCEEEEeCCcchHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhh-------h---c
Confidence 34679999999999999999887 569999999972 1 22 578899999987531 1 1
Q ss_pred CCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcC
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFR 161 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFr 161 (832)
.+.||+|++..... |..+. ..+|..+.++|+|||+|++.++.
T Consensus 134 ~~~fD~v~~~~~l~----~~~~~-------~~~l~~~~~~LkpgG~l~~~~~~ 175 (285)
T 4htf_A 134 ETPVDLILFHAVLE----WVADP-------RSVLQTLWSVLRPGGVLSLMFYN 175 (285)
T ss_dssp SSCEEEEEEESCGG----GCSCH-------HHHHHHHHHTEEEEEEEEEEEEB
T ss_pred CCCceEEEECchhh----cccCH-------HHHHHHHHHHcCCCeEEEEEEeC
Confidence 27899999986422 22221 35778899999999999996654
No 118
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.83 E-value=2.8e-08 Score=102.07 Aligned_cols=120 Identities=14% Similarity=0.089 Sum_probs=83.0
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC---------CCCCceEEEccCCChhHHHHHHHHHhhccCCc
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA---------PIRGAVSLEQDITKPECRARVKKVMEEHGVRA 111 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~---------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~ 111 (832)
.++.+|||||||+|.++..++... ...|+|||+++.. ..+++.++++|+.... + ..+.
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~--------~---~~~~ 158 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETAT--------L---PPNT 158 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCC--------C---CSSC
T ss_pred cCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCC--------C---CCCC
Confidence 467899999999999999888774 4589999999721 1256889999987642 1 1267
Q ss_pred ccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCC---------------CCHHHHHHHHHHc-
Q 003302 112 FDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRS---------------QDYSSVLYCLKQL- 175 (832)
Q Consensus 112 FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs---------------~d~~~ll~~L~~~- 175 (832)
||+|++..... +..+ .-...+|..+.++|+|||+|++..+.. .+...+..+|...
T Consensus 159 fD~v~~~~~l~----~~~~-----~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 229 (254)
T 1xtp_A 159 YDLIVIQWTAI----YLTD-----ADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESG 229 (254)
T ss_dssp EEEEEEESCGG----GSCH-----HHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHT
T ss_pred eEEEEEcchhh----hCCH-----HHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCC
Confidence 89999975321 1111 113567888999999999999976311 1235566666654
Q ss_pred ccceEEe
Q 003302 176 FEKVEVD 182 (832)
Q Consensus 176 F~~V~~~ 182 (832)
|..+.+.
T Consensus 230 f~~~~~~ 236 (254)
T 1xtp_A 230 VRVVKEA 236 (254)
T ss_dssp CCEEEEE
T ss_pred CEEEEee
Confidence 7766654
No 119
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.83 E-value=1.7e-08 Score=105.73 Aligned_cols=113 Identities=23% Similarity=0.251 Sum_probs=83.1
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
+.++.+|||+|||+|.++..++... ..|+|||+++.. .+. +.++++|+... +..
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~g---~~v~gvDi~~~~v~~a~~n~~~~~~~-v~~~~~d~~~~---------~~~-- 182 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKLG---GKALGVDIDPMVLPQAEANAKRNGVR-PRFLEGSLEAA---------LPF-- 182 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTT---CEEEEEESCGGGHHHHHHHHHHTTCC-CEEEESCHHHH---------GGG--
T ss_pred cCCCCEEEEecCCCcHHHHHHHHhC---CeEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChhhc---------CcC--
Confidence 4678999999999999999888752 399999999832 223 78888887541 222
Q ss_pred CCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHHHHHc-ccceEEe
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL-FEKVEVD 182 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~L~~~-F~~V~~~ 182 (832)
+.||+|+++... + .+..++..+.++|+|||+|++..+.......+...+... |..+.+.
T Consensus 183 -~~fD~Vv~n~~~--------~------~~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~l~~~Gf~~~~~~ 242 (254)
T 2nxc_A 183 -GPFDLLVANLYA--------E------LHAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRPLEEA 242 (254)
T ss_dssp -CCEEEEEEECCH--------H------HHHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHHHHTTCEEEEEE
T ss_pred -CCCCEEEECCcH--------H------HHHHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHHHHHCCCEEEEEe
Confidence 678999997531 1 124567788999999999999766655667777777766 7665553
No 120
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.82 E-value=8.4e-09 Score=106.14 Aligned_cols=96 Identities=25% Similarity=0.198 Sum_probs=69.9
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-C---------CCCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-A---------PIRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-~---------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
.++.+|||||||+|.++..++.. +..|+|||+++. . .-.++.++++|+.+... .+
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~------------~~ 104 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAER---GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAF------------KN 104 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCC------------CS
T ss_pred cCCCEEEEeCCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhccc------------CC
Confidence 56789999999999999999886 469999999972 1 11368899999986421 15
Q ss_pred cccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEE
Q 003302 111 AFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKV 159 (832)
Q Consensus 111 ~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KV 159 (832)
.||+|++..+.. ..+. ......+|..+.++|+|||.|++.+
T Consensus 105 ~fD~v~~~~~~~--~~~~------~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 105 EFDAVTMFFSTI--MYFD------EEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp CEEEEEECSSGG--GGSC------HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CccEEEEcCCch--hcCC------HHHHHHHHHHHHHHcCCCeEEEEec
Confidence 789999864211 0111 1123567888999999999999855
No 121
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.82 E-value=1.7e-08 Score=107.62 Aligned_cols=105 Identities=18% Similarity=0.195 Sum_probs=74.0
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC---------CC--------------------------------
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI---------AP-------------------------------- 80 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~---------~~-------------------------------- 80 (832)
++.+|||||||+|.++..++..++ ...|+|||+++. ..
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~-~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWG-PSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTC-CSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 578999999999999999999986 469999999852 00
Q ss_pred ---------------------------C-CCceEEEccCCChhHHHHHHHHHhhccCCcccEEEeCCCCCCCCCchhHHh
Q 003302 81 ---------------------------I-RGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAM 132 (832)
Q Consensus 81 ---------------------------i-~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~ 132 (832)
+ .+|.++++|+...... +.....+.||+|+|... ..|.+-..
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~------~~~~~~~~fD~I~~~~v----l~~ihl~~ 194 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDD------LVEAQTPEYDVVLCLSL----TKWVHLNW 194 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHH------HHTTCCCCEEEEEEESC----HHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccc------cccccCCCcCEEEEChH----HHHhhhcC
Confidence 1 3799999999864311 11112278999999753 12322000
Q ss_pred HHhHHHHHHHHHHHhhcccCcEEEEE
Q 003302 133 SQNALVIDSVKLATQFLAPKGTFVTK 158 (832)
Q Consensus 133 ~q~~L~~~aLk~A~~~LkpGG~fV~K 158 (832)
....+..+|+.+.++|+|||.||+.
T Consensus 195 -~~~~~~~~l~~~~~~LkpGG~lil~ 219 (292)
T 3g07_A 195 -GDEGLKRMFRRIYRHLRPGGILVLE 219 (292)
T ss_dssp -HHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -CHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 1123467889999999999999984
No 122
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.82 E-value=3.7e-09 Score=106.77 Aligned_cols=101 Identities=13% Similarity=0.091 Sum_probs=70.7
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC---------------CCCCCceEEEccCCChhHHHHHHHHH
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI---------------APIRGAVSLEQDITKPECRARVKKVM 104 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~---------------~~i~~V~~i~gDIt~~~~~~~l~~~L 104 (832)
+.++.+|||||||+|.++..++...| ++.|+|||+++- ..++++.++++|+.+++.
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~-------- 95 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNP-SRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPP-------- 95 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCT-TEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCS--------
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCC--------
Confidence 35788999999999999999999875 679999999983 124579999999987531
Q ss_pred hhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEE
Q 003302 105 EEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKV 159 (832)
Q Consensus 105 ~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KV 159 (832)
. .+. |.|+...+ |.........-...+|..+.++|+|||+|++.+
T Consensus 96 ~---~~~-d~v~~~~~------~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 96 L---SGV-GELHVLMP------WGSLLRGVLGSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp C---CCE-EEEEEESC------CHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred C---CCC-CEEEEEcc------chhhhhhhhccHHHHHHHHHHHcCCCcEEEEEe
Confidence 1 133 66664322 222210001011467888999999999999844
No 123
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.82 E-value=1.6e-08 Score=101.96 Aligned_cols=99 Identities=13% Similarity=0.123 Sum_probs=71.5
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCC-----CceEEEccCCChhHHHHHHHHH
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIR-----GAVSLEQDITKPECRARVKKVM 104 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~-----~V~~i~gDIt~~~~~~~l~~~L 104 (832)
.++.+|||||||+|.++..++...+ ...|+|||+++.. .++ ++.++++|+.....
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-------- 98 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSF-FEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDK-------- 98 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTT-CSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCG--------
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCC-CCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccc--------
Confidence 3678999999999999999998754 4699999999621 122 79999999875431
Q ss_pred hhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEc
Q 003302 105 EEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVF 160 (832)
Q Consensus 105 ~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVF 160 (832)
. .+.||+|++..... +..+ .....+|..+.++|+|||.|++..+
T Consensus 99 ~---~~~fD~v~~~~~l~----~~~~-----~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 99 R---FHGYDAATVIEVIE----HLDL-----SRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp G---GCSCSEEEEESCGG----GCCH-----HHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred c---CCCcCEEeeHHHHH----cCCH-----HHHHHHHHHHHHHcCCCEEEEEccC
Confidence 1 16789999975421 1111 1234677889999999998877543
No 124
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.82 E-value=3.7e-09 Score=109.79 Aligned_cols=107 Identities=12% Similarity=0.129 Sum_probs=71.3
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCC-C----------------CCCCCceEEEccCCChhHHHHHHH
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVP-I----------------APIRGAVSLEQDITKPECRARVKK 102 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp-~----------------~~i~~V~~i~gDIt~~~~~~~l~~ 102 (832)
+.++.+|||||||+|.++..++...| ...|+|||+++ + ..+.+|.++++|+... +..
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~-----l~~ 117 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFP-DTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKH-----LPN 117 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGST-TSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTC-----HHH
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCC-CCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHh-----hhh
Confidence 45677899999999999999998876 67999999986 1 1356899999999862 111
Q ss_pred HHhhccCCcccEEEeCCCCCCCCCchhH-HhHHhHHHHHHHHHHHhhcccCcEEEEEE
Q 003302 103 VMEEHGVRAFDLVLHDGSPNVGGAWAQE-AMSQNALVIDSVKLATQFLAPKGTFVTKV 159 (832)
Q Consensus 103 ~L~~~~~~~FDlVlsDgapnv~g~w~~D-~~~q~~L~~~aLk~A~~~LkpGG~fV~KV 159 (832)
.+.. +.||+|++..+. .|... +.........+|..+.++|+|||.|++.+
T Consensus 118 ~~~~---~~~D~v~~~~~d----p~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 118 FFYK---GQLTKMFFLFPD----PHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTIT 168 (235)
T ss_dssp HCCT---TCEEEEEEESCC---------------CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hCCC---cCeeEEEEeCCC----chhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEe
Confidence 2322 678999876431 12111 00000001356778899999999999854
No 125
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.82 E-value=3.6e-09 Score=108.80 Aligned_cols=92 Identities=16% Similarity=0.093 Sum_probs=69.3
Q ss_pred CCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCC--CceEEEccCCChhHHHHHHHHHhhccC
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIR--GAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~--~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
+.+|||||||+|.++..++..+++++.|+|||+++-. .+. +|.++++|+.+. +.....
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~---------l~~~~~ 127 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDV---------MSRLAN 127 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHH---------GGGSCT
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHH---------HHHhcC
Confidence 4599999999999999999998878999999999721 233 688999987642 111112
Q ss_pred CcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 110 RAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 110 ~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
+.||+|++|+... . ....+..+.++|+|||+|++
T Consensus 128 ~~fD~V~~d~~~~--------~------~~~~l~~~~~~LkpGG~lv~ 161 (221)
T 3dr5_A 128 DSYQLVFGQVSPM--------D------LKALVDAAWPLLRRGGALVL 161 (221)
T ss_dssp TCEEEEEECCCTT--------T------HHHHHHHHHHHEEEEEEEEE
T ss_pred CCcCeEEEcCcHH--------H------HHHHHHHHHHHcCCCcEEEE
Confidence 6799999996421 0 12356678899999999997
No 126
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.82 E-value=7.3e-09 Score=105.26 Aligned_cols=98 Identities=17% Similarity=0.211 Sum_probs=71.7
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-C-----CCCCceEEEccCCChhHHHHHHHHHhhccCCcccE
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-A-----PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-~-----~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDl 114 (832)
.++.+|||||||+|.++..++...+ .|+|||+++. . ..+++.++++|+.+.. + .+.||+
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~--------~----~~~~D~ 103 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG---DTAGLELSEDMLTHARKRLPDATLHQGDMRDFR--------L----GRKFSA 103 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS---EEEEEESCHHHHHHHHHHCTTCEEEECCTTTCC--------C----SSCEEE
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHcc--------c----CCCCcE
Confidence 6788999999999999999998743 8999999972 1 2467999999998743 1 167899
Q ss_pred EEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEc
Q 003302 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVF 160 (832)
Q Consensus 115 VlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVF 160 (832)
|+|.... ..|..+ ......+|..+.++|+|||+|++..+
T Consensus 104 v~~~~~~---~~~~~~----~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (239)
T 3bxo_A 104 VVSMFSS---VGYLKT----TEELGAAVASFAEHLEPGGVVVVEPW 142 (239)
T ss_dssp EEECTTG---GGGCCS----HHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred EEEcCch---HhhcCC----HHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 9964310 011111 11235678889999999999998654
No 127
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.81 E-value=2.9e-09 Score=111.68 Aligned_cols=127 Identities=14% Similarity=0.057 Sum_probs=79.8
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-CC--------CC-----------------------------
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-AP--------IR----------------------------- 82 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-~~--------i~----------------------------- 82 (832)
.+|.+|||||||||.++..++... ...|+|+|+++- .. .+
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~--~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDS--FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGT--EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhh--hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 467899999999998877665441 237999999961 10 00
Q ss_pred --Cce-EEEccCCChhHHHHHHHHHhhccCCcccEEEeCCCCCCCCCchhHHh-HHhHHHHHHHHHHHhhcccCcEEEEE
Q 003302 83 --GAV-SLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAM-SQNALVIDSVKLATQFLAPKGTFVTK 158 (832)
Q Consensus 83 --~V~-~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~-~q~~L~~~aLk~A~~~LkpGG~fV~K 158 (832)
++. ++++|++.... +.....++||+|++.... .+. ....-...+|..+.++|+|||+|++.
T Consensus 132 ~~~i~~~~~~D~~~~~~-------~~~~~~~~fD~V~~~~~l--------~~i~~~~~~~~~~l~~i~r~LKPGG~li~~ 196 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNP-------LAPAVLPLADCVLTLLAM--------ECACCSLDAYRAALCNLASLLKPGGHLVTT 196 (263)
T ss_dssp HHHEEEEEECCTTSSST-------TTTCCCCCEEEEEEESCH--------HHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred HhhhheEEeccccCCCC-------CCccccCCCCEeeehHHH--------HHhcCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 122 77888887311 110112679999997531 111 00112346788999999999999997
Q ss_pred EcCC---------------CCHHHHHHHHHHc-ccceEEecC
Q 003302 159 VFRS---------------QDYSSVLYCLKQL-FEKVEVDKP 184 (832)
Q Consensus 159 VFrs---------------~d~~~ll~~L~~~-F~~V~~~KP 184 (832)
.... .+...+...|... |..+.+..+
T Consensus 197 ~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~aGF~i~~~~~~ 238 (263)
T 2a14_A 197 VTLRLPSYMVGKREFSCVALEKGEVEQAVLDAGFDIEQLLHS 238 (263)
T ss_dssp EESSCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred EeecCccceeCCeEeeccccCHHHHHHHHHHCCCEEEEEeec
Confidence 5321 1345677777765 776666543
No 128
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.81 E-value=5.7e-09 Score=105.72 Aligned_cols=99 Identities=11% Similarity=0.065 Sum_probs=71.2
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----------CCCC-CceEEEccCCChhHHHHHHHHHhhcc
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----------APIR-GAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----------~~i~-~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
.++.+|||||||+|.++..++..+|.++.|+|||+++- ..+. ++.++++|+.... ........
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~~~~~~~ 137 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTL-----AELIHAGQ 137 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHH-----HHHHTTTC
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHH-----HHhhhccC
Confidence 36789999999999999999999886789999999962 1233 4899999976421 11111101
Q ss_pred CCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEE
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTK 158 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~K 158 (832)
.+.||+|++|+.. .. ....+..+.++|+|||+|++.
T Consensus 138 ~~~fD~v~~~~~~--------~~------~~~~l~~~~~~L~pgG~lv~~ 173 (225)
T 3tr6_A 138 AWQYDLIYIDADK--------AN------TDLYYEESLKLLREGGLIAVD 173 (225)
T ss_dssp TTCEEEEEECSCG--------GG------HHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCccEEEECCCH--------HH------HHHHHHHHHHhcCCCcEEEEe
Confidence 1578999998631 11 134567788999999999984
No 129
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.81 E-value=5.3e-09 Score=107.90 Aligned_cols=114 Identities=18% Similarity=0.168 Sum_probs=80.6
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC------------CCCCceEEEccCCChhHHHHHHHHHhhc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA------------PIRGAVSLEQDITKPECRARVKKVMEEH 107 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~------------~i~~V~~i~gDIt~~~~~~~l~~~L~~~ 107 (832)
+.++.+|||+|||+|.++..++..+++.+.|+|+|+++.. ..+++.++++|+.+.. +..
T Consensus 94 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~--------~~~- 164 (258)
T 2pwy_A 94 LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAE--------LEE- 164 (258)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCC--------CCT-
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcC--------CCC-
Confidence 4688999999999999999999986557899999998621 2357899999987641 111
Q ss_pred cCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHHHHHc-ccceE
Q 003302 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL-FEKVE 180 (832)
Q Consensus 108 ~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~L~~~-F~~V~ 180 (832)
+.||+|+++.+ + . ..+|..+.++|+|||+|++.+........++..|... |..+.
T Consensus 165 --~~~D~v~~~~~-~---~------------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~~~~ 220 (258)
T 2pwy_A 165 --AAYDGVALDLM-E---P------------WKVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPFRLER 220 (258)
T ss_dssp --TCEEEEEEESS-C---G------------GGGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTTEEEEE
T ss_pred --CCcCEEEECCc-C---H------------HHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCceEE
Confidence 56899999753 1 1 1345678899999999998654433344444445433 54443
No 130
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.80 E-value=7.2e-09 Score=111.07 Aligned_cols=96 Identities=22% Similarity=0.255 Sum_probs=73.5
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CC-CCceEEEccCCChhHHHHHHHHHhhc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PI-RGAVSLEQDITKPECRARVKKVMEEH 107 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i-~~V~~i~gDIt~~~~~~~l~~~L~~~ 107 (832)
+.++.+|||||||+|.++..++... ++.|+|||+++.. .+ .++.++++|+.+.+ +.
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~-- 182 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTP--------FD-- 182 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC--------CC--
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCC--------CC--
Confidence 5678999999999999999999875 4689999999721 23 36999999998743 11
Q ss_pred cCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEc
Q 003302 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVF 160 (832)
Q Consensus 108 ~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVF 160 (832)
.+.||+|++..... +. + ...+|..+.++|+|||+|++..+
T Consensus 183 -~~~fD~V~~~~~l~----~~-~-------~~~~l~~~~~~LkpgG~l~~~~~ 222 (312)
T 3vc1_A 183 -KGAVTASWNNESTM----YV-D-------LHDLFSEHSRFLKVGGRYVTITG 222 (312)
T ss_dssp -TTCEEEEEEESCGG----GS-C-------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -CCCEeEEEECCchh----hC-C-------HHHHHHHHHHHcCCCcEEEEEEc
Confidence 26789999975421 11 2 34677889999999999998654
No 131
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.80 E-value=2.6e-09 Score=110.62 Aligned_cols=100 Identities=13% Similarity=0.005 Sum_probs=70.5
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-C---------CCCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-A---------PIRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-~---------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
.+|.+|||+|||+|..+..++...| ..|+|||++|- . ...++.++++|+... +.....+
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~--~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~---------~~~~~~~ 127 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDV---------APTLPDG 127 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCE--EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHH---------GGGSCTT
T ss_pred cCCCeEEEECCCccHHHHHHHHhCC--cEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhh---------ccccccc
Confidence 5789999999999999999887654 47999999972 1 123577788876432 1112237
Q ss_pred cccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 111 AFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 111 ~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
.||.|++|..+.....+. ......++..+.++|+|||.|++
T Consensus 128 ~FD~i~~D~~~~~~~~~~------~~~~~~~~~e~~rvLkPGG~l~f 168 (236)
T 3orh_A 128 HFDGILYDTYPLSEETWH------THQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp CEEEEEECCCCCBGGGTT------THHHHHHHHTHHHHEEEEEEEEE
T ss_pred CCceEEEeeeecccchhh------hcchhhhhhhhhheeCCCCEEEE
Confidence 799999997543322211 12234677889999999999986
No 132
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.80 E-value=8.2e-09 Score=108.41 Aligned_cols=103 Identities=20% Similarity=0.186 Sum_probs=74.3
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CC-CCceEEEccCCChhHHHHHHHHHhhc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PI-RGAVSLEQDITKPECRARVKKVMEEH 107 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i-~~V~~i~gDIt~~~~~~~l~~~L~~~ 107 (832)
+.++.+|||||||+|.++..++.. + .+.|+|||+++.. .+ .++.++++|+.+.. +.
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~-- 129 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERA-G-IGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRH--------MD-- 129 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHH-T-CSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSC--------CC--
T ss_pred CCCCCeEEEECCCCCHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccc--------cC--
Confidence 478899999999999999988876 2 4599999999621 11 35889999998742 10
Q ss_pred cCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcC
Q 003302 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFR 161 (832)
Q Consensus 108 ~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFr 161 (832)
..+.||+|++...+. +.. ........+|..+.++|+|||+|++.++.
T Consensus 130 ~~~~fD~v~~~~~l~----~~~---~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 130 LGKEFDVISSQFSFH----YAF---STSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp CSSCEEEEEEESCGG----GGG---SSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred CCCCcCEEEECchhh----hhc---CCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 126799999986432 110 11122456788999999999999996644
No 133
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.79 E-value=8e-09 Score=107.55 Aligned_cols=96 Identities=15% Similarity=0.188 Sum_probs=71.2
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----------CCCC-CceEEEccCCChhHHHHHHHHHhhcc
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----------APIR-GAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----------~~i~-~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
.++.+|||||||+|+++..++..+|.++.|+|||+++- ..+. +|.++++|+.... ..+. .
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l------~~~~--~ 133 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSL------ESLG--E 133 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHH------HTCC--S
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH------HhcC--C
Confidence 46789999999999999999999887789999999972 1333 6899999976421 1111 1
Q ss_pred CCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEE
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTK 158 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~K 158 (832)
.+.||+|++|+.. .. ....+..+.++|+|||+||+.
T Consensus 134 ~~~fD~V~~d~~~-------~~-------~~~~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 134 CPAFDLIFIDADK-------PN-------NPHYLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp CCCCSEEEECSCG-------GG-------HHHHHHHHHHTCCTTCEEEEE
T ss_pred CCCeEEEEECCch-------HH-------HHHHHHHHHHhcCCCeEEEEe
Confidence 1478999998631 11 123567788999999999974
No 134
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.79 E-value=1e-08 Score=101.11 Aligned_cols=94 Identities=14% Similarity=0.114 Sum_probs=69.8
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
++.+|||||||+|.++..++.. +..|+|||+++.. .++++.++++|+.+.. + .+
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~--------~----~~ 96 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAAN---GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLT--------F----DR 96 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCC--------C----CC
T ss_pred CCCeEEEEcCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCC--------C----CC
Confidence 5679999999999999999886 4599999999721 2457899999988643 1 26
Q ss_pred cccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEE
Q 003302 111 AFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKV 159 (832)
Q Consensus 111 ~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KV 159 (832)
.||+|++.+... +... .....++..+.++|+|||+|++..
T Consensus 97 ~~D~v~~~~~l~----~~~~-----~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 97 QYDFILSTVVLM----FLEA-----KTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp CEEEEEEESCGG----GSCG-----GGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CceEEEEcchhh----hCCH-----HHHHHHHHHHHHhcCCCeEEEEEE
Confidence 789999986422 1110 012456788899999999987743
No 135
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.79 E-value=2.7e-08 Score=104.66 Aligned_cols=100 Identities=19% Similarity=0.196 Sum_probs=73.1
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------C-CCCceEEEccCCChhHHHHHHHHHhhc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------P-IRGAVSLEQDITKPECRARVKKVMEEH 107 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~-i~~V~~i~gDIt~~~~~~~l~~~L~~~ 107 (832)
+.++.+|||||||+|.++..++...+ ..|+|||+++.. . .+++.++++|+.+.+
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~------------ 127 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYD--VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD------------ 127 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC------------
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC------------
Confidence 46788999999999999999986654 499999999621 1 247889999986521
Q ss_pred cCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCC
Q 003302 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQD 164 (832)
Q Consensus 108 ~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d 164 (832)
+.||+|++...... ... .....+|..+.++|+|||+|++..+....
T Consensus 128 --~~fD~v~~~~~l~~----~~~-----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 173 (287)
T 1kpg_A 128 --EPVDRIVSIGAFEH----FGH-----ERYDAFFSLAHRLLPADGVMLLHTITGLH 173 (287)
T ss_dssp --CCCSEEEEESCGGG----TCT-----TTHHHHHHHHHHHSCTTCEEEEEEEEECC
T ss_pred --CCeeEEEEeCchhh----cCh-----HHHHHHHHHHHHhcCCCCEEEEEEecCCC
Confidence 56899999764221 100 01245678899999999999997665443
No 136
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.79 E-value=1.6e-08 Score=109.76 Aligned_cols=110 Identities=15% Similarity=0.151 Sum_probs=76.1
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC------------------CC----CCCceEEEccCCChhHH
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI------------------AP----IRGAVSLEQDITKPECR 97 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~------------------~~----i~~V~~i~gDIt~~~~~ 97 (832)
+.++.+|||+|||+|.++..++..+++.+.|+|||+++. +. ..++.++++|+.+...
T Consensus 103 ~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~- 181 (336)
T 2b25_A 103 INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATE- 181 (336)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC--
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccc-
Confidence 468899999999999999999998655689999999872 11 2578999999987420
Q ss_pred HHHHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHHHHH
Q 003302 98 ARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQ 174 (832)
Q Consensus 98 ~~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~L~~ 174 (832)
.+.. +.||+|+++++. .|. ++..+.++|+|||+|++.+........++..+..
T Consensus 182 -----~~~~---~~fD~V~~~~~~----~~~------------~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~ 234 (336)
T 2b25_A 182 -----DIKS---LTFDAVALDMLN----PHV------------TLPVFYPHLKHGGVCAVYVVNITQVIELLDGIRT 234 (336)
T ss_dssp --------------EEEEEECSSS----TTT------------THHHHGGGEEEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred -----ccCC---CCeeEEEECCCC----HHH------------HHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHh
Confidence 0111 568999998631 111 3457889999999999865543333344444443
No 137
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.79 E-value=7.5e-09 Score=104.33 Aligned_cols=99 Identities=21% Similarity=0.255 Sum_probs=72.4
Q ss_pred CCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC----------CCCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 39 FLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA----------PIRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 39 fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
++.++.+|||||||+|.++..++...+ .|+|||+++.. ..+++.++++|+.+.. +.
T Consensus 35 ~~~~~~~vLDlG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~--------~~--- 100 (227)
T 1ve3_A 35 YMKKRGKVLDLACGVGGFSFLLEDYGF---EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLS--------FE--- 100 (227)
T ss_dssp SCCSCCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCC--------SC---
T ss_pred hcCCCCeEEEEeccCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCC--------CC---
Confidence 345688999999999999999988743 89999999721 1267999999998743 11
Q ss_pred CCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEc
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVF 160 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVF 160 (832)
.+.||+|++++... .+... ....++..+.++|+|||+|++..+
T Consensus 101 ~~~~D~v~~~~~~~---~~~~~------~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 101 DKTFDYVIFIDSIV---HFEPL------ELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp TTCEEEEEEESCGG---GCCHH------HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCcEEEEEEcCchH---hCCHH------HHHHHHHHHHHHcCCCcEEEEEec
Confidence 15789999985411 11111 124577889999999999998654
No 138
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.78 E-value=5.8e-08 Score=103.90 Aligned_cols=100 Identities=20% Similarity=0.150 Sum_probs=74.2
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CC-CCceEEEccCCChhHHHHHHHHHhhc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PI-RGAVSLEQDITKPECRARVKKVMEEH 107 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i-~~V~~i~gDIt~~~~~~~l~~~L~~~ 107 (832)
+.++.+|||+|||+|.++..++... ++.|+|||+++.. .+ +++.++++|+.+.+
T Consensus 88 ~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------------ 153 (318)
T 2fk8_A 88 LKPGMTLLDIGCGWGTTMRRAVERF--DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA------------ 153 (318)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC------------
T ss_pred CCCcCEEEEEcccchHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC------------
Confidence 4678899999999999999998875 4599999999721 22 35889999986531
Q ss_pred cCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCC
Q 003302 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQD 164 (832)
Q Consensus 108 ~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d 164 (832)
+.||+|++...... ... .....+|..+.++|+|||+|++..+....
T Consensus 154 --~~fD~v~~~~~l~~----~~~-----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 154 --EPVDRIVSIEAFEH----FGH-----ENYDDFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp --CCCSEEEEESCGGG----TCG-----GGHHHHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred --CCcCEEEEeChHHh----cCH-----HHHHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 56899999864321 110 11245678899999999999997765554
No 139
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.78 E-value=8.5e-08 Score=96.66 Aligned_cols=99 Identities=12% Similarity=0.140 Sum_probs=71.6
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCC-----CceEEEccCCChhHHHHHHHHH
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIR-----GAVSLEQDITKPECRARVKKVM 104 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~-----~V~~i~gDIt~~~~~~~l~~~L 104 (832)
.++.+|||||||+|.++..++...+ ...|+|||+++.. .++ ++.++++|+.....
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-------- 98 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKS-FEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDK-------- 98 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTT-CCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCG--------
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccccc--------
Confidence 3578999999999999999998754 4699999999721 122 79999999976431
Q ss_pred hhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEc
Q 003302 105 EEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVF 160 (832)
Q Consensus 105 ~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVF 160 (832)
. .+.||+|++..... +..+ .....+|..+.++|+|||.|++..+
T Consensus 99 ~---~~~fD~V~~~~~l~----~~~~-----~~~~~~l~~~~~~LkpgG~~i~~~~ 142 (219)
T 3jwg_A 99 R---FSGYDAATVIEVIE----HLDE-----NRLQAFEKVLFEFTRPQTVIVSTPN 142 (219)
T ss_dssp G---GTTCSEEEEESCGG----GCCH-----HHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred c---cCCCCEEEEHHHHH----hCCH-----HHHHHHHHHHHHhhCCCEEEEEccc
Confidence 1 16789999975421 1111 1134677889999999998877544
No 140
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.78 E-value=1.5e-08 Score=105.49 Aligned_cols=97 Identities=20% Similarity=0.161 Sum_probs=73.6
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CC-CCceEEEccCCChhHHHHHHHHHhhc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PI-RGAVSLEQDITKPECRARVKKVMEEH 107 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i-~~V~~i~gDIt~~~~~~~l~~~L~~~ 107 (832)
+.++.+|||||||+|.++..++... ++.|+|||+++.. .+ .++.++++|+...+ +.
T Consensus 59 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--------~~-- 126 (273)
T 3bus_A 59 VRSGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLP--------FE-- 126 (273)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC--------SC--
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCC--------CC--
Confidence 4678999999999999999999875 4699999999621 22 35899999998743 11
Q ss_pred cCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEc
Q 003302 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVF 160 (832)
Q Consensus 108 ~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVF 160 (832)
.+.||+|++..... |..+. ..+|..+.++|+|||+|++..+
T Consensus 127 -~~~fD~v~~~~~l~----~~~~~-------~~~l~~~~~~L~pgG~l~i~~~ 167 (273)
T 3bus_A 127 -DASFDAVWALESLH----HMPDR-------GRALREMARVLRPGGTVAIADF 167 (273)
T ss_dssp -TTCEEEEEEESCTT----TSSCH-------HHHHHHHHTTEEEEEEEEEEEE
T ss_pred -CCCccEEEEechhh----hCCCH-------HHHHHHHHHHcCCCeEEEEEEe
Confidence 26789999976532 22221 3567889999999999998665
No 141
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.77 E-value=1.4e-08 Score=111.05 Aligned_cols=125 Identities=18% Similarity=0.116 Sum_probs=79.8
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCC--CceEEEccCCChhHHHHHHHHHhhc
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIR--GAVSLEQDITKPECRARVKKVMEEH 107 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~--~V~~i~gDIt~~~~~~~l~~~L~~~ 107 (832)
.++.+|||||||+|+++..++.. +..|+|||+++.. .+. ++.++++|+.+... .....
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~---ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~-----~~~~~- 222 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAA---GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQ-----REERR- 222 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT---TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHH-----HHHHH-
T ss_pred CCCCcEEEcccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHH-----HHHhc-
Confidence 46789999999999999999885 3499999999721 234 38899999876321 11100
Q ss_pred cCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCC--CHHHHHHHHHHcc
Q 003302 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQ--DYSSVLYCLKQLF 176 (832)
Q Consensus 108 ~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~--d~~~ll~~L~~~F 176 (832)
...||+|++|++....+.. ...+........++..+.++|+|||+|++....+. ....+..++...+
T Consensus 223 -~~~fD~Ii~dPP~~~~~~~-~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~ 291 (332)
T 2igt_A 223 -GSTYDIILTDPPKFGRGTH-GEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETM 291 (332)
T ss_dssp -TCCBSEEEECCCSEEECTT-CCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHT
T ss_pred -CCCceEEEECCccccCCch-HHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHH
Confidence 1578999999752211100 00001112234677888999999999777554433 3455566666544
No 142
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.77 E-value=1.9e-08 Score=108.44 Aligned_cols=142 Identities=13% Similarity=0.027 Sum_probs=93.8
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC---------------CCCCceEEEccCCChhHHHHHHHHHh
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA---------------PIRGAVSLEQDITKPECRARVKKVME 105 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~---------------~i~~V~~i~gDIt~~~~~~~l~~~L~ 105 (832)
.++.+|||||||+|+++..++...+ ...|+|||+++.. ..+++.++++|+.... .
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~---------~ 163 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGT-VEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFV---------R 163 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHH---------H
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHH---------H
Confidence 5678999999999999999987643 5699999999621 1257899999976421 1
Q ss_pred hccCCcccEEEeCCCCCCCCCchhHHhHHhHH-HHHHHHHHHhhcccCcEEEEEEcCCC----CHHHHHHHHHHc-ccce
Q 003302 106 EHGVRAFDLVLHDGSPNVGGAWAQEAMSQNAL-VIDSVKLATQFLAPKGTFVTKVFRSQ----DYSSVLYCLKQL-FEKV 179 (832)
Q Consensus 106 ~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L-~~~aLk~A~~~LkpGG~fV~KVFrs~----d~~~ll~~L~~~-F~~V 179 (832)
....+.||+|++|..... +.. ..| ...++..+.++|+|||+|++....+. ....+...|... |..|
T Consensus 164 ~~~~~~fDvIi~d~~~~~---~~~-----~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v 235 (304)
T 3bwc_A 164 QTPDNTYDVVIIDTTDPA---GPA-----SKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASV 235 (304)
T ss_dssp SSCTTCEEEEEEECC-----------------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEE
T ss_pred hccCCceeEEEECCCCcc---ccc-----hhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcE
Confidence 101267999999864211 110 011 14567889999999999998654332 234566777777 9887
Q ss_pred EEec-CCCCCCCCcceeEEEee
Q 003302 180 EVDK-PAASRSASAEIYLLGIK 200 (832)
Q Consensus 180 ~~~K-P~sSR~~SaEiyvVc~g 200 (832)
.++. +..+.+...-.|++|..
T Consensus 236 ~~~~~~vP~yp~g~w~f~~as~ 257 (304)
T 3bwc_A 236 QYALMHVPTYPCGSIGTLVCSK 257 (304)
T ss_dssp EEEECCCTTSTTSCCEEEEEES
T ss_pred EEEEeecccccCcceEEEEEeC
Confidence 7653 23344344456777754
No 143
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.77 E-value=2.4e-08 Score=111.68 Aligned_cols=121 Identities=21% Similarity=0.223 Sum_probs=78.8
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
+.+|.+|||||||||+|+..++.. ++.|+|||+++.. .+. ..+.++|+.+. +...
T Consensus 212 ~~~g~~VLDlg~GtG~~sl~~a~~---ga~V~avDis~~al~~a~~n~~~ng~~-~~~~~~D~~~~---------l~~~- 277 (393)
T 4dmg_A 212 VRPGERVLDVYSYVGGFALRAARK---GAYALAVDKDLEALGVLDQAALRLGLR-VDIRHGEALPT---------LRGL- 277 (393)
T ss_dssp CCTTCEEEEESCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCC-CEEEESCHHHH---------HHTC-
T ss_pred hcCCCeEEEcccchhHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHhCCC-CcEEEccHHHH---------HHHh-
Confidence 457999999999999999999986 3459999999731 122 24567776542 1111
Q ss_pred CCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCC-CCHHHHHHHHHHcc
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRS-QDYSSVLYCLKQLF 176 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs-~d~~~ll~~L~~~F 176 (832)
.+.||+|++|++....+. .+..........++..+.++|+|||+|++..... .....+...+...+
T Consensus 278 ~~~fD~Ii~dpP~f~~~~--~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a~ 344 (393)
T 4dmg_A 278 EGPFHHVLLDPPTLVKRP--EELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARRAA 344 (393)
T ss_dssp CCCEEEEEECCCCCCSSG--GGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCH--HHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHH
Confidence 134899999975322221 1222223344677888999999999999755543 34455555555443
No 144
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.77 E-value=8.7e-09 Score=106.23 Aligned_cols=95 Identities=15% Similarity=0.081 Sum_probs=72.4
Q ss_pred CCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC----------CCCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 39 FLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA----------PIRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 39 fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
.+.++.+|||||||+|.++..++.. ++.|+|||+++.. ..+++.++++|+.+.. +.
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~--------~~--- 101 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIAR---GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIP--------LP--- 101 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTT---TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCC--------SC---
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCC--------CC---
Confidence 3577899999999999999999876 4699999999721 2467999999997743 11
Q ss_pred CCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEE
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTK 158 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~K 158 (832)
.+.||+|++.... +|..+ ...++..+.++|+|||+|++.
T Consensus 102 ~~~fD~v~~~~~l----~~~~~-------~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 102 DESVHGVIVVHLW----HLVPD-------WPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp TTCEEEEEEESCG----GGCTT-------HHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCeeEEEECCch----hhcCC-------HHHHHHHHHHHCCCCcEEEEE
Confidence 2678999997542 23222 235678889999999999986
No 145
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.76 E-value=4.4e-09 Score=111.00 Aligned_cols=114 Identities=12% Similarity=0.140 Sum_probs=79.3
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC------------CCCCceEEEccCCChhHHHHHHHHHhhc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA------------PIRGAVSLEQDITKPECRARVKKVMEEH 107 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~------------~i~~V~~i~gDIt~~~~~~~l~~~L~~~ 107 (832)
+.++.+|||+|||+|.++..++..+.+++.|+|||+++.. ..+++.++++|+.++ +.
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~---------~~-- 176 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADF---------IS-- 176 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTC---------CC--
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhcc---------Cc--
Confidence 4678999999999999999999885446799999998621 235789999999762 11
Q ss_pred cCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHHHHHc-ccceEE
Q 003302 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL-FEKVEV 181 (832)
Q Consensus 108 ~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~L~~~-F~~V~~ 181 (832)
.+.||+|+++.+ + . ..+|..+.++|+|||+|++.+........+...+... |..+.+
T Consensus 177 -~~~fD~Vi~~~~-~------~---------~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~~~~~ 234 (275)
T 1yb2_A 177 -DQMYDAVIADIP-D------P---------WNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASGMHHLET 234 (275)
T ss_dssp -SCCEEEEEECCS-C------G---------GGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGTEEEEEE
T ss_pred -CCCccEEEEcCc-C------H---------HHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCeEEEE
Confidence 157899999742 1 1 1345678899999999998654332233344444332 444443
No 146
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.76 E-value=4.8e-09 Score=114.59 Aligned_cols=102 Identities=10% Similarity=0.171 Sum_probs=76.5
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----------CCC-CCceEEEccCCChhHHHHHHHHHhhc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----------API-RGAVSLEQDITKPECRARVKKVMEEH 107 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----------~~i-~~V~~i~gDIt~~~~~~~l~~~L~~~ 107 (832)
+.++.+|||||||+|+++.. +. + .+.|+|||+++. ..+ .++.++++|+.+..
T Consensus 193 ~~~~~~VLDlg~G~G~~~l~-a~--~-~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~------------ 256 (336)
T 2yx1_A 193 VSLNDVVVDMFAGVGPFSIA-CK--N-AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD------------ 256 (336)
T ss_dssp CCTTCEEEETTCTTSHHHHH-TT--T-SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC------------
T ss_pred cCCCCEEEEccCccCHHHHh-cc--C-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc------------
Confidence 35789999999999999988 66 3 679999999972 133 46899999987631
Q ss_pred cCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHHHHHc
Q 003302 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL 175 (832)
Q Consensus 108 ~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~L~~~ 175 (832)
+.||+|++|++... ...+..+.++|+|||+|++..+... ...+...+...
T Consensus 257 --~~fD~Vi~dpP~~~---------------~~~l~~~~~~L~~gG~l~~~~~~~~-~~~~~~~l~~~ 306 (336)
T 2yx1_A 257 --VKGNRVIMNLPKFA---------------HKFIDKALDIVEEGGVIHYYTIGKD-FDKAIKLFEKK 306 (336)
T ss_dssp --CCEEEEEECCTTTG---------------GGGHHHHHHHEEEEEEEEEEEEESS-SHHHHHHHHHH
T ss_pred --CCCcEEEECCcHhH---------------HHHHHHHHHHcCCCCEEEEEEeecC-chHHHHHHHHh
Confidence 56799999975321 1345567899999999998666555 56666666665
No 147
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.76 E-value=4.8e-09 Score=107.11 Aligned_cols=112 Identities=16% Similarity=0.086 Sum_probs=77.6
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-C-----CCCCceEEEccCCChhHHHHHHHHHhhccCCccc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-A-----PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFD 113 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-~-----~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FD 113 (832)
+.++.+|||+|||+|.++..++.. +..|+|||+++. . ..+++.++++|+.+... +. ..+.||
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-------~~--~~~~fD 113 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQ---AARWAAYDFSPELLKLARANAPHADVYEWNGKGELP-------AG--LGAPFG 113 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCC-------TT--CCCCEE
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccC-------Cc--CCCCEE
Confidence 467899999999999999999987 469999999972 1 25689999999964210 11 026799
Q ss_pred EEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHHHHHc-ccceEE
Q 003302 114 LVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL-FEKVEV 181 (832)
Q Consensus 114 lVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~L~~~-F~~V~~ 181 (832)
+|+++..+ ..+|..+.++|+|||+|+. +........+...+... |..+.+
T Consensus 114 ~v~~~~~~-----------------~~~l~~~~~~LkpgG~l~~-~~~~~~~~~~~~~l~~~Gf~~~~~ 164 (226)
T 3m33_A 114 LIVSRRGP-----------------TSVILRLPELAAPDAHFLY-VGPRLNVPEVPERLAAVGWDIVAE 164 (226)
T ss_dssp EEEEESCC-----------------SGGGGGHHHHEEEEEEEEE-EESSSCCTHHHHHHHHTTCEEEEE
T ss_pred EEEeCCCH-----------------HHHHHHHHHHcCCCcEEEE-eCCcCCHHHHHHHHHHCCCeEEEE
Confidence 99997321 1234567899999999993 33333444555556543 544443
No 148
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.76 E-value=6.8e-09 Score=108.87 Aligned_cols=117 Identities=14% Similarity=0.176 Sum_probs=84.6
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC------------C--CCCceEEEccCCChhHHHHHHHHHh
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA------------P--IRGAVSLEQDITKPECRARVKKVME 105 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~------------~--i~~V~~i~gDIt~~~~~~~l~~~L~ 105 (832)
+.++.+|||+|||+|.++..++..+++.+.|+|+|+++.. . .+++.++++|+.... +.
T Consensus 97 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~--------~~ 168 (280)
T 1i9g_A 97 IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSE--------LP 168 (280)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCC--------CC
T ss_pred CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcC--------CC
Confidence 4678899999999999999999876557899999998621 1 357899999987642 11
Q ss_pred hccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHHHHH--cccceEEec
Q 003302 106 EHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQ--LFEKVEVDK 183 (832)
Q Consensus 106 ~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~L~~--~F~~V~~~K 183 (832)
.+.||+|+++++ ..| .+|..+.++|+|||+|++.+........++..+.. .|..+.++.
T Consensus 169 ---~~~~D~v~~~~~----~~~------------~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~~~f~~~~~~~ 229 (280)
T 1i9g_A 169 ---DGSVDRAVLDML----APW------------EVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRAKQCWTEPRAWE 229 (280)
T ss_dssp ---TTCEEEEEEESS----CGG------------GGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHHSSBCCCEEEC
T ss_pred ---CCceeEEEECCc----CHH------------HHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcCCcCCcEEEE
Confidence 157899999753 111 24567889999999999966554444455555554 466666553
No 149
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.76 E-value=1.2e-08 Score=108.52 Aligned_cols=98 Identities=19% Similarity=0.140 Sum_probs=70.8
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-C--------CC-----CCceEEEccCCChhHHHHHHHHHhhc
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-A--------PI-----RGAVSLEQDITKPECRARVKKVMEEH 107 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-~--------~i-----~~V~~i~gDIt~~~~~~~l~~~L~~~ 107 (832)
++.+|||||||+|.++..++.. +..|+|||+++. . .. .++.++++|+.+...
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~----------- 147 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDL---GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL----------- 147 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTT---TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-----------
T ss_pred CCCcEEEEeccCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-----------
Confidence 3459999999999999999886 468999999972 1 11 468999999987531
Q ss_pred cCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCC
Q 003302 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRS 162 (832)
Q Consensus 108 ~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs 162 (832)
.+.||+|++.... -.|.. ......+|..+.++|+|||+|++.++..
T Consensus 148 -~~~fD~v~~~~~~---~~~~~-----~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 193 (299)
T 3g2m_A 148 -DKRFGTVVISSGS---INELD-----EADRRGLYASVREHLEPGGKFLLSLAMS 193 (299)
T ss_dssp -SCCEEEEEECHHH---HTTSC-----HHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred -CCCcCEEEECCcc---cccCC-----HHHHHHHHHHHHHHcCCCcEEEEEeecC
Confidence 2778999874210 01111 1223567888999999999999977654
No 150
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.75 E-value=5.6e-09 Score=110.47 Aligned_cols=97 Identities=16% Similarity=0.246 Sum_probs=73.6
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CC-CCceEEEccCCChhHHHHHHHHHhhc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PI-RGAVSLEQDITKPECRARVKKVMEEH 107 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i-~~V~~i~gDIt~~~~~~~l~~~L~~~ 107 (832)
+.++.+|||+|||+|.++..++... ++.|+|||+++.. .+ +++.++++|+.+.+ +.
T Consensus 80 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--------~~-- 147 (297)
T 2o57_A 80 LQRQAKGLDLGAGYGGAARFLVRKF--GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP--------CE-- 147 (297)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS--------SC--
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCC--------CC--
Confidence 4678999999999999999999875 3599999999721 12 46899999998753 11
Q ss_pred cCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEc
Q 003302 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVF 160 (832)
Q Consensus 108 ~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVF 160 (832)
.+.||+|++..... +..+ ...+|..+.++|+|||+|++..+
T Consensus 148 -~~~fD~v~~~~~l~----~~~~-------~~~~l~~~~~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 148 -DNSYDFIWSQDAFL----HSPD-------KLKVFQECARVLKPRGVMAITDP 188 (297)
T ss_dssp -TTCEEEEEEESCGG----GCSC-------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -CCCEeEEEecchhh----hcCC-------HHHHHHHHHHHcCCCeEEEEEEe
Confidence 16789999976432 1122 24677889999999999998654
No 151
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.75 E-value=3e-09 Score=108.08 Aligned_cols=94 Identities=16% Similarity=0.116 Sum_probs=70.8
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------C-----CCCceEEEccCCChhHHHHHHHH
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------P-----IRGAVSLEQDITKPECRARVKKV 103 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~-----i~~V~~i~gDIt~~~~~~~l~~~ 103 (832)
+.++.+|||+|||+|.++..++..+++.+.|+|||+++.. . ..++.++++|++...
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-------- 146 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY-------- 146 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC--------
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCc--------
Confidence 5688999999999999999999887656799999999621 1 347889999987532
Q ss_pred HhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcC
Q 003302 104 MEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFR 161 (832)
Q Consensus 104 L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFr 161 (832)
.. .+.||+|++++.+. . ++..+.++|+|||+|++.+..
T Consensus 147 ~~---~~~fD~i~~~~~~~----~-------------~~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 147 AE---EAPYDAIHVGAAAP----V-------------VPQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp GG---GCCEEEEEECSBBS----S-------------CCHHHHHTEEEEEEEEEEESC
T ss_pred cc---CCCcCEEEECCchH----H-------------HHHHHHHhcCCCcEEEEEEec
Confidence 11 15789999986431 0 123567899999999996543
No 152
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.74 E-value=1e-08 Score=111.96 Aligned_cols=118 Identities=15% Similarity=0.099 Sum_probs=84.4
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC----------CCCCceEEEccCCChhHHHHHHHHHhhccCCc
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA----------PIRGAVSLEQDITKPECRARVKKVMEEHGVRA 111 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~ 111 (832)
++.+|||||||+|.++..++...| ...|+|||+++.. .-..+.++++|+.... .+.
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~-------------~~~ 261 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSP-KIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEV-------------KGR 261 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCT-TCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTC-------------CSC
T ss_pred CCCeEEEecCccCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccc-------------cCC
Confidence 467899999999999999998865 4689999999731 1123567888887531 167
Q ss_pred ccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHHHHHcccceEEe
Q 003302 112 FDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVD 182 (832)
Q Consensus 112 FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~L~~~F~~V~~~ 182 (832)
||+|+++++...+..+.. .....++..+.++|+|||.|++...+...|.. .+..+|..+..+
T Consensus 262 fD~Iv~~~~~~~g~~~~~------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~---~l~~~f~~~~~~ 323 (343)
T 2pjd_A 262 FDMIISNPPFHDGMQTSL------DAAQTLIRGAVRHLNSGGELRIVANAFLPYPD---VLDETFGFHEVI 323 (343)
T ss_dssp EEEEEECCCCCSSSHHHH------HHHHHHHHHHGGGEEEEEEEEEEEETTSSHHH---HHHHHHSCCEEE
T ss_pred eeEEEECCCcccCccCCH------HHHHHHHHHHHHhCCCCcEEEEEEcCCCCcHH---HHHHhcCceEEE
Confidence 899999986543322221 22456788999999999999996666555554 455667666554
No 153
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.74 E-value=3.8e-09 Score=108.42 Aligned_cols=102 Identities=13% Similarity=0.018 Sum_probs=69.6
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC----------CCCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA----------PIRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
+.++.+|||||||+|.++..++... ...|+|||+++.. .-.++.++++|+.+.. ..+. .
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~------~~~~---~ 126 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVA------PTLP---D 126 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSC--EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHG------GGSC---T
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcC--CCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhh------cccC---C
Confidence 3578899999999999999997643 3489999999721 1146888999986531 0011 2
Q ss_pred CcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEE
Q 003302 110 RAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTK 158 (832)
Q Consensus 110 ~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~K 158 (832)
+.||+|++|........+ .......++..+.++|+|||+|++.
T Consensus 127 ~~fD~V~~d~~~~~~~~~------~~~~~~~~l~~~~r~LkpgG~l~~~ 169 (236)
T 1zx0_A 127 GHFDGILYDTYPLSEETW------HTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp TCEEEEEECCCCCBGGGT------TTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred CceEEEEECCcccchhhh------hhhhHHHHHHHHHHhcCCCeEEEEE
Confidence 679999996321110111 1122345688899999999999874
No 154
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.74 E-value=2.6e-08 Score=96.27 Aligned_cols=114 Identities=13% Similarity=0.160 Sum_probs=80.7
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC------CCCCceEEEccCCChhHHHHHHHHHhhccCCccc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA------PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFD 113 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FD 113 (832)
+.++.+|||+|||+|.++..++... ..|+|||+++.. ..+++.++++| .. +. .+.||
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~v~~~~~d---~~--------~~---~~~~D 77 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEKFDSVITLSDP---KE--------IP---DNSVD 77 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHHCTTSEEESSG---GG--------SC---TTCEE
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHhCCCcEEEeCC---CC--------CC---CCceE
Confidence 4677899999999999999998874 389999999721 25689999988 11 11 26789
Q ss_pred EEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCC------------CHHHHHHHHHHcccceEE
Q 003302 114 LVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQ------------DYSSVLYCLKQLFEKVEV 181 (832)
Q Consensus 114 lVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~------------d~~~ll~~L~~~F~~V~~ 181 (832)
+|++..... +..+ ...++..+.++|+|||+|++..+... +...+...|. -|..+..
T Consensus 78 ~v~~~~~l~----~~~~-------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-Gf~~~~~ 145 (170)
T 3i9f_A 78 FILFANSFH----DMDD-------KQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS-NFVVEKR 145 (170)
T ss_dssp EEEEESCST----TCSC-------HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT-TEEEEEE
T ss_pred EEEEccchh----cccC-------HHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh-CcEEEEc
Confidence 999986432 1111 23567788999999999999765432 2335555555 6666665
Q ss_pred e
Q 003302 182 D 182 (832)
Q Consensus 182 ~ 182 (832)
.
T Consensus 146 ~ 146 (170)
T 3i9f_A 146 F 146 (170)
T ss_dssp E
T ss_pred c
Confidence 4
No 155
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.74 E-value=1.3e-08 Score=102.09 Aligned_cols=91 Identities=14% Similarity=0.086 Sum_probs=69.3
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----------CCCCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----------APIRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----------~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
+.++.+|||+|||+|.++..++.. ++.|+|||+++- ..++++.++++|+..... .
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~--------~--- 140 (210)
T 3lbf_A 75 LTPQSRVLEIGTGSGYQTAILAHL---VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQ--------A--- 140 (210)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG--------G---
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCc--------c---
Confidence 467899999999999999999988 469999999972 135679999999876321 1
Q ss_pred CCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcC
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFR 161 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFr 161 (832)
.+.||+|++++.+. +..+ .+.++|+|||+|++.+..
T Consensus 141 ~~~~D~i~~~~~~~----~~~~-------------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 141 RAPFDAIIVTAAPP----EIPT-------------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp GCCEEEEEESSBCS----SCCT-------------HHHHTEEEEEEEEEEECS
T ss_pred CCCccEEEEccchh----hhhH-------------HHHHhcccCcEEEEEEcC
Confidence 16789999986532 2221 357899999999996644
No 156
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.74 E-value=1.2e-08 Score=104.86 Aligned_cols=93 Identities=13% Similarity=0.103 Sum_probs=69.9
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----------CCC-CCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----------API-RGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----------~~i-~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
.++.+|||||||+|.++..++...+ ++.|+|||+++- ..+ ++|.++++|+..... ..+
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-----~~~---- 139 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISD-DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFE-----NVN---- 139 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCT-TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHH-----HHT----
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHH-----hhc----
Confidence 4678999999999999999998655 789999999972 123 379999999976321 011
Q ss_pred CCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
.+.||+|++++.+.. ....+..+.++|+|||+||+
T Consensus 140 ~~~fD~V~~~~~~~~--------------~~~~l~~~~~~LkpgG~lv~ 174 (232)
T 3ntv_A 140 DKVYDMIFIDAAKAQ--------------SKKFFEIYTPLLKHQGLVIT 174 (232)
T ss_dssp TSCEEEEEEETTSSS--------------HHHHHHHHGGGEEEEEEEEE
T ss_pred cCCccEEEEcCcHHH--------------HHHHHHHHHHhcCCCeEEEE
Confidence 167899999864210 12456778899999999987
No 157
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.73 E-value=2.5e-08 Score=107.10 Aligned_cols=142 Identities=12% Similarity=0.112 Sum_probs=92.2
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-------------C--CCCceEEEccCCChhHHHHHHHHHh
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-------------P--IRGAVSLEQDITKPECRARVKKVME 105 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-------------~--i~~V~~i~gDIt~~~~~~~l~~~L~ 105 (832)
..+.+|||||||+|+++..++.+.+ ...|++||+++.. . .+++.++++|+... +.
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~---------l~ 158 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDS-VEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEY---------VR 158 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTT-CSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHH---------GG
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHH---------Hh
Confidence 3457999999999999999988754 5799999999621 1 35789999987542 11
Q ss_pred hccCCcccEEEeCCCCC-CCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCC-C---HHHHHHHHHHcccceE
Q 003302 106 EHGVRAFDLVLHDGSPN-VGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQ-D---YSSVLYCLKQLFEKVE 180 (832)
Q Consensus 106 ~~~~~~FDlVlsDgapn-v~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~-d---~~~ll~~L~~~F~~V~ 180 (832)
. ..+.||+|++|+... .+. .... .....+..+.++|+|||+|++.+..+. . +..++..|...|..|.
T Consensus 159 ~-~~~~fD~Ii~d~~~~~~~~---~~~l----~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~ 230 (296)
T 1inl_A 159 K-FKNEFDVIIIDSTDPTAGQ---GGHL----FTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVFPITR 230 (296)
T ss_dssp G-CSSCEEEEEEEC-------------C----CSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHCSEEE
T ss_pred h-CCCCceEEEEcCCCcccCc---hhhh----hHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHCCceE
Confidence 1 126799999996421 110 0000 114567788999999999999643321 2 3455667777798877
Q ss_pred Eec-CCCCCCCCcceeEEEee
Q 003302 181 VDK-PAASRSASAEIYLLGIK 200 (832)
Q Consensus 181 ~~K-P~sSR~~SaEiyvVc~g 200 (832)
.+. +..+-+...-.|++|..
T Consensus 231 ~~~~~vp~~p~g~~~f~~as~ 251 (296)
T 1inl_A 231 VYLGFMTTYPSGMWSYTFASK 251 (296)
T ss_dssp EEEEECTTSTTSEEEEEEEES
T ss_pred EEEeecCccCCCceEEEEecC
Confidence 653 22233344567778764
No 158
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.73 E-value=2.6e-08 Score=104.82 Aligned_cols=93 Identities=16% Similarity=0.075 Sum_probs=70.1
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
++.+|||||||+|.++..++.. +..|+|||+++.. .+ ++.++++|+.+... .+
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~---g~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~------------~~ 183 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL---GYDVTSWDHNENSIAFLNETKEKENL-NISTALYDINAANI------------QE 183 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCGGGCCC------------CS
T ss_pred CCCcEEEECCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHHcCC-ceEEEEeccccccc------------cC
Confidence 6789999999999999999987 4599999999721 22 78999999987431 27
Q ss_pred cccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEE
Q 003302 111 AFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKV 159 (832)
Q Consensus 111 ~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KV 159 (832)
.||+|++++... |..+ .....+|..+.++|+|||.|++..
T Consensus 184 ~fD~i~~~~~~~----~~~~-----~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 184 NYDFIVSTVVFM----FLNR-----ERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp CEEEEEECSSGG----GSCG-----GGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CccEEEEccchh----hCCH-----HHHHHHHHHHHHhcCCCcEEEEEE
Confidence 789999986432 1111 112457788999999999988744
No 159
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.72 E-value=1.1e-08 Score=107.93 Aligned_cols=116 Identities=17% Similarity=0.231 Sum_probs=82.2
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CC-CCceEEEccCCChhHHHHHHHHHhhc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PI-RGAVSLEQDITKPECRARVKKVMEEH 107 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i-~~V~~i~gDIt~~~~~~~l~~~L~~~ 107 (832)
+.++.+|||+|||+|.++..++..+++.+.|+|+|+++.. .+ +++.++++|+.+. +..
T Consensus 110 ~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---------~~~- 179 (277)
T 1o54_A 110 VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG---------FDE- 179 (277)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC---------CSC-
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc---------ccC-
Confidence 4678899999999999999999986657899999998721 22 4688889998753 111
Q ss_pred cCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHHHHHc-ccceEEec
Q 003302 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQL-FEKVEVDK 183 (832)
Q Consensus 108 ~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~L~~~-F~~V~~~K 183 (832)
+.||+|+++++ + . ..+|..+.++|+|||+|++.+........+...|... |..+.++.
T Consensus 180 --~~~D~V~~~~~-~---~------------~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~~~~~~~ 238 (277)
T 1o54_A 180 --KDVDALFLDVP-D---P------------WNYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQELPFIRIEVWE 238 (277)
T ss_dssp --CSEEEEEECCS-C---G------------GGTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSSEEEEEEEC
T ss_pred --CccCEEEECCc-C---H------------HHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCceeEEEE
Confidence 56899999853 1 1 1345677899999999998664333334455555543 66665553
No 160
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.72 E-value=1.5e-08 Score=105.10 Aligned_cols=112 Identities=17% Similarity=0.145 Sum_probs=73.6
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC---------CC-----C-C----------------------
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA---------PI-----R-G---------------------- 83 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~---------~i-----~-~---------------------- 83 (832)
++.+|||+|||+|.++..++..+ .+...|+|||+++.. .. . .
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 56799999999999999999873 125689999999621 11 1 1
Q ss_pred ---ce-------------EEEccCCChhHHHHHHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHh
Q 003302 84 ---AV-------------SLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQ 147 (832)
Q Consensus 84 ---V~-------------~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~ 147 (832)
+. ++++|+.+..... .+.. ...||+|+|+++......|..+ ........++..+.+
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~----~~~~--~~~fD~Iv~npp~~~~~~~~~~--~~~~~~~~~l~~~~~ 202 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALS----AVLA--GSAPDVVLTDLPYGERTHWEGQ--VPGQPVAGLLRSLAS 202 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHH----HHHT--TCCCSEEEEECCGGGSSSSSSC--CCHHHHHHHHHHHHH
T ss_pred hhhhhhhccccccccccceeecccccccccc----cccC--CCCceEEEeCCCeecccccccc--ccccHHHHHHHHHHH
Confidence 56 8899998743110 0001 1378999999753332333210 112334567888999
Q ss_pred hcccCcEEEEEEcCC
Q 003302 148 FLAPKGTFVTKVFRS 162 (832)
Q Consensus 148 ~LkpGG~fV~KVFrs 162 (832)
+|+|||+|++ +..+
T Consensus 203 ~LkpgG~l~~-~~~~ 216 (250)
T 1o9g_A 203 ALPAHAVIAV-TDRS 216 (250)
T ss_dssp HSCTTCEEEE-EESS
T ss_pred hcCCCcEEEE-eCcc
Confidence 9999999998 5433
No 161
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.71 E-value=8.6e-09 Score=102.75 Aligned_cols=102 Identities=15% Similarity=0.097 Sum_probs=71.3
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC----------CCCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA----------PIRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
+.++.+|||+|||+|.++..++... +..|+|||+++.. ..+++.++++|+.+.+ +. .
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~--------~~---~ 87 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVED--GYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLP--------FK---D 87 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHHT--TCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCC--------SC---T
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCC--------CC---C
Confidence 3567899999999999854443332 5699999999721 1246889999998743 11 2
Q ss_pred CcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCC
Q 003302 110 RAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQ 163 (832)
Q Consensus 110 ~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~ 163 (832)
+.||+|++..... ++.. .....++..+.++|+|||+|++.++...
T Consensus 88 ~~fD~v~~~~~l~---~~~~------~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 132 (209)
T 2p8j_A 88 ESMSFVYSYGTIF---HMRK------NDVKEAIDEIKRVLKPGGLACINFLTTK 132 (209)
T ss_dssp TCEEEEEECSCGG---GSCH------HHHHHHHHHHHHHEEEEEEEEEEEEETT
T ss_pred CceeEEEEcChHH---hCCH------HHHHHHHHHHHHHcCCCcEEEEEEeccc
Confidence 6789999975321 1111 1235678889999999999999777543
No 162
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.71 E-value=2.1e-08 Score=108.52 Aligned_cols=143 Identities=17% Similarity=0.139 Sum_probs=92.4
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC--------C--------CCCceEEEccCCChhHHHHHHHHH
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA--------P--------IRGAVSLEQDITKPECRARVKKVM 104 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~--------~--------i~~V~~i~gDIt~~~~~~~l~~~L 104 (832)
..+.+|||||||+|+++..++++.+ ...|++||+++.. + .+++.++++|+... +
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~---------l 145 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPT-VEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAY---------L 145 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTT-CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHH---------H
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHH---------H
Confidence 4568999999999999999988654 5699999999621 1 35789999998642 1
Q ss_pred hhccCCcccEEEeCCCCCCCCCchhHHhHHhHH-HHHHHHHHHhhcccCcEEEEEEcC-----CCCHHHHHHHHHHcccc
Q 003302 105 EEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNAL-VIDSVKLATQFLAPKGTFVTKVFR-----SQDYSSVLYCLKQLFEK 178 (832)
Q Consensus 105 ~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L-~~~aLk~A~~~LkpGG~fV~KVFr-----s~d~~~ll~~L~~~F~~ 178 (832)
.. ..+.||+|++|+....+ .... . ..| ....+..+.++|+|||.|++.... ...+..+...+...|..
T Consensus 146 ~~-~~~~fD~Ii~d~~~~~~-~~~~--~--~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~F~~ 219 (314)
T 1uir_A 146 ER-TEERYDVVIIDLTDPVG-EDNP--A--RLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREAFRY 219 (314)
T ss_dssp HH-CCCCEEEEEEECCCCBS-TTCG--G--GGGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTTCSE
T ss_pred Hh-cCCCccEEEECCCCccc-ccCc--c--hhccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHHCCc
Confidence 11 12679999999753220 0011 0 011 245677899999999999986432 22355666778888987
Q ss_pred eEEecC-CCCCCCCcceeEEEee
Q 003302 179 VEVDKP-AASRSASAEIYLLGIK 200 (832)
Q Consensus 179 V~~~KP-~sSR~~SaEiyvVc~g 200 (832)
+..+.- ..+. ...-.|++|..
T Consensus 220 v~~~~~~vP~~-~g~~~~~~as~ 241 (314)
T 1uir_A 220 VRSYKNHIPGF-FLNFGFLLASD 241 (314)
T ss_dssp EEEEEEEEGGG-TEEEEEEEEES
T ss_pred eEEEEEecCCC-CCeEEEEEEEC
Confidence 765421 1111 22345667653
No 163
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.71 E-value=9.2e-09 Score=104.78 Aligned_cols=97 Identities=26% Similarity=0.335 Sum_probs=71.1
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC--------CCCCCceEEEccCCChhHHHHHHHHHhhccCCcc
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI--------APIRGAVSLEQDITKPECRARVKKVMEEHGVRAF 112 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~--------~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~F 112 (832)
.++.+|||||||+|.++..++.. + ...|+|||+++. ....++.++++|+.... +. .+.|
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~--------~~---~~~f 108 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEH-G-ASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLH--------LP---QDSF 108 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCC--------CC---TTCE
T ss_pred cCCCEEEEEcCcCCHHHHHHHHC-C-CCeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhcc--------CC---CCCc
Confidence 46789999999999999999886 2 238999999962 12246889999987642 11 2678
Q ss_pred cEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcC
Q 003302 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFR 161 (832)
Q Consensus 113 DlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFr 161 (832)
|+|++..... +..+ ...+|..+.++|+|||+|++.++.
T Consensus 109 D~v~~~~~l~----~~~~-------~~~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 109 DLAYSSLALH----YVED-------VARLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp EEEEEESCGG----GCSC-------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred eEEEEecccc----ccch-------HHHHHHHHHHhcCcCcEEEEEeCC
Confidence 9999975321 1111 245678889999999999996643
No 164
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.71 E-value=1.2e-08 Score=109.82 Aligned_cols=107 Identities=10% Similarity=0.080 Sum_probs=68.2
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCC-CC----------CCC------CceEEEccCCChhHHHHHHHH
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVP-IA----------PIR------GAVSLEQDITKPECRARVKKV 103 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp-~~----------~i~------~V~~i~gDIt~~~~~~~l~~~ 103 (832)
.++.+|||||||+|+.+..++.. ..+.|+|||+++ |. ... ++.++++|+........+...
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~--~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~ 124 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYG--EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREV 124 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTT
T ss_pred CCCCeEEEEecCCcHhHHHHHhc--CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcc
Confidence 45789999999999866555443 246899999997 21 111 256778888553322222211
Q ss_pred HhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEc
Q 003302 104 MEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVF 160 (832)
Q Consensus 104 L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVF 160 (832)
+ ..++||+|+|..+.++. |...+ ...+|+.+.++|+|||+|++.+.
T Consensus 125 ~---~~~~FD~V~~~~~lhy~--~~~~~------~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 125 F---YFGKFNIIDWQFAIHYS--FHPRH------YATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp C---CSSCEEEEEEESCGGGT--CSTTT------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred c---cCCCeeEEEECchHHHh--CCHHH------HHHHHHHHHHHcCCCCEEEEEeC
Confidence 2 22689999997543211 11111 14678899999999999998654
No 165
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.71 E-value=9.5e-09 Score=102.90 Aligned_cols=97 Identities=19% Similarity=0.248 Sum_probs=71.7
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC------CCCCceEEEccCCChhHHHHHHHHHhhccCCcccE
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA------PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDl 114 (832)
.++.+|||+|||+|.++..+ + ...|+|||+++.. ..+++.++++|+.+.+ +. .+.||+
T Consensus 35 ~~~~~vLdiG~G~G~~~~~l----~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~--------~~---~~~fD~ 98 (211)
T 2gs9_A 35 PPGESLLEVGAGTGYWLRRL----P-YPQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALP--------FP---GESFDV 98 (211)
T ss_dssp CCCSEEEEETCTTCHHHHHC----C-CSEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCC--------SC---SSCEEE
T ss_pred CCCCeEEEECCCCCHhHHhC----C-CCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCC--------CC---CCcEEE
Confidence 47889999999999998776 2 2389999999721 2367899999998743 11 267899
Q ss_pred EEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCC
Q 003302 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQD 164 (832)
Q Consensus 115 VlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d 164 (832)
|++..... +..+ ...+|..+.++|+|||.|++.++....
T Consensus 99 v~~~~~l~----~~~~-------~~~~l~~~~~~L~pgG~l~i~~~~~~~ 137 (211)
T 2gs9_A 99 VLLFTTLE----FVED-------VERVLLEARRVLRPGGALVVGVLEALS 137 (211)
T ss_dssp EEEESCTT----TCSC-------HHHHHHHHHHHEEEEEEEEEEEECTTS
T ss_pred EEEcChhh----hcCC-------HHHHHHHHHHHcCCCCEEEEEecCCcC
Confidence 99986432 1111 235678899999999999998776654
No 166
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.70 E-value=5.5e-08 Score=103.37 Aligned_cols=141 Identities=13% Similarity=0.118 Sum_probs=92.5
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-------------C--CCCceEEEccCCChhHHHHHHHHHhh
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-------------P--IRGAVSLEQDITKPECRARVKKVMEE 106 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-------------~--i~~V~~i~gDIt~~~~~~~l~~~L~~ 106 (832)
.+.+|||||||+|+++..++.+.+ ...|++||+++.. . .+++.++++|+... +..
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~---------l~~ 144 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPS-VKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMH---------IAK 144 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTT-CSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHH---------HHT
T ss_pred CCCEEEEECCchHHHHHHHHhCCC-CceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHH---------Hhh
Confidence 468999999999999999887643 5799999999621 1 35789999998642 111
Q ss_pred ccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCC-C---HHHHHHHHHHcccceEEe
Q 003302 107 HGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQ-D---YSSVLYCLKQLFEKVEVD 182 (832)
Q Consensus 107 ~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~-d---~~~ll~~L~~~F~~V~~~ 182 (832)
..+.||+|++|+....+. ..+.. ....+..+.++|+|||.|++.+..+. . +..+...++..|..|..+
T Consensus 145 -~~~~fD~Ii~d~~~~~~~---~~~l~----~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~ 216 (275)
T 1iy9_A 145 -SENQYDVIMVDSTEPVGP---AVNLF----TKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIFPITKLY 216 (275)
T ss_dssp -CCSCEEEEEESCSSCCSC---CCCCS----TTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEE
T ss_pred -CCCCeeEEEECCCCCCCc---chhhh----HHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHhCCCeEEE
Confidence 126799999997421111 00000 12456678899999999999654332 1 345566778889887765
Q ss_pred c-CCCCCCCCcceeEEEee
Q 003302 183 K-PAASRSASAEIYLLGIK 200 (832)
Q Consensus 183 K-P~sSR~~SaEiyvVc~g 200 (832)
. +..+.+...-.|++|..
T Consensus 217 ~~~vp~~~~g~w~~~~ask 235 (275)
T 1iy9_A 217 TANIPTYPSGLWTFTIGSK 235 (275)
T ss_dssp EECCTTSGGGCEEEEEEES
T ss_pred EEecCcccCcceEEEEeeC
Confidence 3 22232233456777754
No 167
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.70 E-value=1.6e-08 Score=102.79 Aligned_cols=99 Identities=13% Similarity=0.132 Sum_probs=71.1
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CC-CCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PI-RGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i-~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
.++.+|||+|||+|.++..++..++.++.|+|||+++.. .+ .++.++++|+.+. +........
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~-----~~~~~~~~~ 142 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALET-----LDELLAAGE 142 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHH-----HHHHHHTTC
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHH-----HHHHHhcCC
Confidence 467899999999999999999988767899999999721 22 4688999987642 111111101
Q ss_pred CCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEE
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTK 158 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~K 158 (832)
.+.||+|++|+... . ....+..+.++|+|||+|++.
T Consensus 143 ~~~~D~v~~d~~~~--------~------~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 143 AGTFDVAVVDADKE--------N------CSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp TTCEEEEEECSCST--------T------HHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCccEEEECCCHH--------H------HHHHHHHHHHHcCCCeEEEEE
Confidence 14689999986411 0 124567788999999999983
No 168
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.70 E-value=6.5e-09 Score=109.56 Aligned_cols=106 Identities=20% Similarity=0.161 Sum_probs=71.5
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC---------------CCCCceEEEccCCChhHHHHHHHHHh
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA---------------PIRGAVSLEQDITKPECRARVKKVME 105 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~---------------~i~~V~~i~gDIt~~~~~~~l~~~L~ 105 (832)
.++.+|||||||+|.++..++.. +..|+|||+++.. ...++.+.++|+..... ..+
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~- 126 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEE---GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDK-----DVP- 126 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHH-----HSC-
T ss_pred cCCCEEEEecCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCcc-----ccc-
Confidence 36789999999999999999887 4599999999721 12457788899876431 011
Q ss_pred hccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEc
Q 003302 106 EHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVF 160 (832)
Q Consensus 106 ~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVF 160 (832)
..+.||+|+|.|... .+..+..........+|..+.++|+|||+|++.+.
T Consensus 127 --~~~~fD~V~~~g~~l---~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 127 --AGDGFDAVICLGNSF---AHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp --CTTCEEEEEECTTCG---GGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred --cCCCeEEEEEcChHH---hhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 126789999974210 11111000012235678899999999999998654
No 169
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.70 E-value=1.7e-08 Score=100.37 Aligned_cols=98 Identities=14% Similarity=0.141 Sum_probs=71.9
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC------C----CCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA------P----IRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~------~----i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
+.++ +|||||||+|.++..++.. +..|+|||+++.. . -.++.++++|+.+.. +. .
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~--------~~---~ 92 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASL---GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFD--------IV---A 92 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBS--------CC---T
T ss_pred CCCC-CEEEECCCCCHhHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcC--------CC---c
Confidence 4567 9999999999999988876 4599999999721 0 127889999998753 11 2
Q ss_pred CcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCC
Q 003302 110 RAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQ 163 (832)
Q Consensus 110 ~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~ 163 (832)
+.||+|++... ++... ....+|..+.++|+|||.|++.++...
T Consensus 93 ~~fD~v~~~~~-----~~~~~------~~~~~l~~~~~~L~pgG~l~~~~~~~~ 135 (202)
T 2kw5_A 93 DAWEGIVSIFC-----HLPSS------LRQQLYPKVYQGLKPGGVFILEGFAPE 135 (202)
T ss_dssp TTCSEEEEECC-----CCCHH------HHHHHHHHHHTTCCSSEEEEEEEECTT
T ss_pred CCccEEEEEhh-----cCCHH------HHHHHHHHHHHhcCCCcEEEEEEeccc
Confidence 67899998521 22111 234677889999999999999876544
No 170
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.70 E-value=1.8e-08 Score=102.28 Aligned_cols=99 Identities=17% Similarity=0.208 Sum_probs=72.3
Q ss_pred CCCCCCEEEEEcCCcCHHHHHHHHhCC----CCCEEEEEeCCCCC-----------C-----CCCceEEEccCCChhHHH
Q 003302 39 FLRSSHAVLDLCAAPGGWMQVAVQRVP----VGSLVLGLDLVPIA-----------P-----IRGAVSLEQDITKPECRA 98 (832)
Q Consensus 39 fl~~g~~VLDLGcGPGg~sq~La~~~p----~~~~ViGVDLsp~~-----------~-----i~~V~~i~gDIt~~~~~~ 98 (832)
.+.++.+|||||||+|.++..++..++ +.+.|+|||+++.. . ..++.++++|+.......
T Consensus 77 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 156 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEE 156 (227)
T ss_dssp TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHH
T ss_pred hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccccc
Confidence 357889999999999999999999875 46799999999621 2 457999999987632100
Q ss_pred HHHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcC
Q 003302 99 RVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFR 161 (832)
Q Consensus 99 ~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFr 161 (832)
.... +.||+|+++++.. + ++..+.++|+|||+|++.+..
T Consensus 157 ----~~~~---~~fD~I~~~~~~~----~-------------~~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 157 ----KKEL---GLFDAIHVGASAS----E-------------LPEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp ----HHHH---CCEEEEEECSBBS----S-------------CCHHHHHHEEEEEEEEEEEEE
T ss_pred ----CccC---CCcCEEEECCchH----H-------------HHHHHHHhcCCCcEEEEEEcc
Confidence 0111 6789999986532 1 123567899999999996543
No 171
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.70 E-value=9e-09 Score=103.69 Aligned_cols=96 Identities=19% Similarity=0.170 Sum_probs=66.0
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----------CCC--CCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----------API--RGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----------~~i--~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
++.+|||||||+|.++..++... ...|+|||+++. ..+ +++.++++|+.+.. ....
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~---------~~~~ 121 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQ--AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFL---------KQPQ 121 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHT---------TSCC
T ss_pred CCCeEEEcCCccCHHHHHHHHcc--CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHH---------Hhhc
Confidence 57899999999999999876652 358999999962 133 57899999976421 1111
Q ss_pred CCc-ccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHH--HhhcccCcEEEEEEc
Q 003302 109 VRA-FDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLA--TQFLAPKGTFVTKVF 160 (832)
Q Consensus 109 ~~~-FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A--~~~LkpGG~fV~KVF 160 (832)
.+. ||+|++|++.. + .. ...++..+ .++|+|||.|++...
T Consensus 122 ~~~~fD~I~~~~~~~----~--~~------~~~~l~~~~~~~~LkpgG~l~i~~~ 164 (201)
T 2ift_A 122 NQPHFDVVFLDPPFH----F--NL------AEQAISLLCENNWLKPNALIYVETE 164 (201)
T ss_dssp SSCCEEEEEECCCSS----S--CH------HHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred cCCCCCEEEECCCCC----C--cc------HHHHHHHHHhcCccCCCcEEEEEEC
Confidence 257 89999997522 1 00 12233444 568999999998553
No 172
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.70 E-value=4.5e-08 Score=104.19 Aligned_cols=139 Identities=20% Similarity=0.228 Sum_probs=89.8
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC--------C-------------CCCCceEEEccCCChhHHHH
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI--------A-------------PIRGAVSLEQDITKPECRAR 99 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~--------~-------------~i~~V~~i~gDIt~~~~~~~ 99 (832)
..+.+|||||||+|+++..++.+ + ...|++||+++. . ..+++.++++|+...
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~-~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~----- 146 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-D-VDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEF----- 146 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-C-CSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHH-----
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-C-CCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHH-----
Confidence 45689999999999999999887 4 579999999962 1 125688889887542
Q ss_pred HHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCC-C---HHHHHHHHHHc
Q 003302 100 VKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQ-D---YSSVLYCLKQL 175 (832)
Q Consensus 100 l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~-d---~~~ll~~L~~~ 175 (832)
+ .. .+.||+|++|+....+. .... .....+..+.++|+|||.|++...... . +..+...+...
T Consensus 147 l----~~--~~~fD~Ii~d~~~~~~~---~~~l----~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~ 213 (281)
T 1mjf_A 147 I----KN--NRGFDVIIADSTDPVGP---AKVL----FSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKV 213 (281)
T ss_dssp H----HH--CCCEEEEEEECCCCC--------T----TSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHH
T ss_pred h----cc--cCCeeEEEECCCCCCCc---chhh----hHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHH
Confidence 1 11 16789999997521110 0110 023567788999999999998643321 2 34455566677
Q ss_pred ccceEEec-CCCCCCCCcceeEEEee
Q 003302 176 FEKVEVDK-PAASRSASAEIYLLGIK 200 (832)
Q Consensus 176 F~~V~~~K-P~sSR~~SaEiyvVc~g 200 (832)
|..+..+. +..+. ...-.|++|..
T Consensus 214 f~~v~~~~~~vP~~-~g~~~~~~as~ 238 (281)
T 1mjf_A 214 FDRVYYYSFPVIGY-ASPWAFLVGVK 238 (281)
T ss_dssp CSEEEEEEECCTTS-SSSEEEEEEEE
T ss_pred CCceEEEEEecCCC-CceEEEEEeeC
Confidence 88777643 22222 33456777754
No 173
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.69 E-value=3.6e-08 Score=109.38 Aligned_cols=109 Identities=17% Similarity=0.171 Sum_probs=76.3
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----------CCCCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----------APIRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----------~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
++.+|||||||+|+++..++.. ...|+|||+++. +.+.++.++++|+.+.. .. +.. ...
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~-----~~-~~~-~~~ 278 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLL-----RR-LEK-EGE 278 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHH-----HH-HHH-TTC
T ss_pred CCCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHH-----HH-HHh-cCC
Confidence 6789999999999999999987 468999999962 13556899999987532 11 110 115
Q ss_pred cccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCC
Q 003302 111 AFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRS 162 (832)
Q Consensus 111 ~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs 162 (832)
.||+|++|++....+. .............+..+.++|+|||+|++.....
T Consensus 279 ~fD~Ii~dpP~~~~~~--~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 279 RFDLVVLDPPAFAKGK--KDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp CEEEEEECCCCSCCST--TSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CeeEEEECCCCCCCCh--hHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 7899999985322111 1112222344567888999999999999876543
No 174
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.69 E-value=5.2e-08 Score=108.42 Aligned_cols=123 Identities=11% Similarity=0.080 Sum_probs=79.9
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCC--CceEEEccCCChhHHHHHHHHHhhc
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIR--GAVSLEQDITKPECRARVKKVMEEH 107 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~--~V~~i~gDIt~~~~~~~l~~~L~~~ 107 (832)
.++.+|||||||+|+++..++.. + ...|+|||+++.. .+. ++.++++|+.+.. .. +..
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~-g-a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l-----~~-~~~- 281 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMG-G-AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYF-----KY-ARR- 281 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHT-T-BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHH-----HH-HHH-
T ss_pred cCCCeEEEEeeccCHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHH-----HH-HHH-
Confidence 57889999999999999999875 2 3489999999832 344 7899999987521 11 111
Q ss_pred cCCcccEEEeCCCCCCCC-CchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCC-CHHHHHHHHHHc
Q 003302 108 GVRAFDLVLHDGSPNVGG-AWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQ-DYSSVLYCLKQL 175 (832)
Q Consensus 108 ~~~~FDlVlsDgapnv~g-~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~-d~~~ll~~L~~~ 175 (832)
....||+|++|++....+ ....+. ......++..+..+|+|||+|++...... ....+...+...
T Consensus 282 ~~~~fD~Ii~DPP~~~~~~~~~~~~---~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~i~~~ 348 (385)
T 2b78_A 282 HHLTYDIIIIDPPSFARNKKEVFSV---SKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEKG 348 (385)
T ss_dssp TTCCEEEEEECCCCC-----CCCCH---HHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHH
T ss_pred hCCCccEEEECCCCCCCChhhHHHH---HHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHH
Confidence 014789999998542110 111111 12234567788999999999998665443 334444444443
No 175
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.69 E-value=2.3e-08 Score=97.51 Aligned_cols=99 Identities=22% Similarity=0.218 Sum_probs=67.7
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CC-CCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PI-RGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i-~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
.++.+|||+|||+|.++..++.. + ...|+|||+++.. .+ +++.++++|+.+.. .. .
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---------~~-~ 97 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSR-G-MSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAI---------DC-L 97 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHT-T-CCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHH---------HH-B
T ss_pred cCCCeEEEeCCCCCHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhH---------Hh-h
Confidence 46789999999999999998876 3 4699999999621 22 35888999886521 11 1
Q ss_pred CCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHH--HhhcccCcEEEEEEcCCC
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLA--TQFLAPKGTFVTKVFRSQ 163 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A--~~~LkpGG~fV~KVFrs~ 163 (832)
...||+|+++++. .... ....+..+ .++|+|||+|++.+....
T Consensus 98 ~~~fD~i~~~~~~------~~~~------~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 98 TGRFDLVFLDPPY------AKET------IVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp CSCEEEEEECCSS------HHHH------HHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred cCCCCEEEECCCC------Ccch------HHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 1568999998642 1111 12223333 489999999999665443
No 176
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.69 E-value=3e-08 Score=103.32 Aligned_cols=94 Identities=16% Similarity=0.225 Sum_probs=72.6
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC------CCCCceEEEccCCChhHHHHHHHHHhhccCCcccE
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA------PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDl 114 (832)
.++.+|||+|||+|.++..++..++ ++.|+|||+++.. ..+++.++++|+...+ +. .+.||+
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~--------~~---~~~fD~ 151 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALP-EITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLP--------FS---DTSMDA 151 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCT-TSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCS--------BC---TTCEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCC--------CC---CCceeE
Confidence 5788999999999999999998874 5699999999721 2467889999987643 11 167899
Q ss_pred EEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCC
Q 003302 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQD 164 (832)
Q Consensus 115 VlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d 164 (832)
|++...+. .+..+.++|+|||+|++.++....
T Consensus 152 v~~~~~~~------------------~l~~~~~~L~pgG~l~~~~~~~~~ 183 (269)
T 1p91_A 152 IIRIYAPC------------------KAEELARVVKPGGWVITATPGPRH 183 (269)
T ss_dssp EEEESCCC------------------CHHHHHHHEEEEEEEEEEEECTTT
T ss_pred EEEeCChh------------------hHHHHHHhcCCCcEEEEEEcCHHH
Confidence 99865421 245678999999999997766544
No 177
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.68 E-value=6.4e-08 Score=102.70 Aligned_cols=109 Identities=17% Similarity=0.203 Sum_probs=76.9
Q ss_pred CCCEEEEEcCCc---CHHHHHHHHhCCCCCEEEEEeCCCC-C--------CCCCceEEEccCCChhHH---HHHHHHHhh
Q 003302 42 SSHAVLDLCAAP---GGWMQVAVQRVPVGSLVLGLDLVPI-A--------PIRGAVSLEQDITKPECR---ARVKKVMEE 106 (832)
Q Consensus 42 ~g~~VLDLGcGP---Gg~sq~La~~~p~~~~ViGVDLsp~-~--------~i~~V~~i~gDIt~~~~~---~~l~~~L~~ 106 (832)
...+|||||||+ |.++..+....| ++.|+|||++|. . ..+++.++++|++++... ..+...+.
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p-~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d- 154 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNP-DARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMID- 154 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCT-TCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCC-
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCC-CCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCC-
Confidence 347999999999 999888877765 679999999972 1 235799999999986421 00111222
Q ss_pred ccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCC
Q 003302 107 HGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQ 163 (832)
Q Consensus 107 ~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~ 163 (832)
...||+|++.+.. +|..+.. ...+|+.+.++|+|||+|++..+...
T Consensus 155 --~~~~d~v~~~~vl----h~~~d~~-----~~~~l~~~~~~L~pGG~l~i~~~~~~ 200 (274)
T 2qe6_A 155 --FSRPAAIMLVGML----HYLSPDV-----VDRVVGAYRDALAPGSYLFMTSLVDT 200 (274)
T ss_dssp --TTSCCEEEETTTG----GGSCTTT-----HHHHHHHHHHHSCTTCEEEEEEEBCS
T ss_pred --CCCCEEEEEechh----hhCCcHH-----HHHHHHHHHHhCCCCcEEEEEEecCc
Confidence 2468999997642 2333321 24578889999999999999777653
No 178
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.68 E-value=4e-08 Score=102.56 Aligned_cols=98 Identities=10% Similarity=0.142 Sum_probs=71.1
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CC-CCceEEEccCCChhHHHHHHHHHhhc-
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PI-RGAVSLEQDITKPECRARVKKVMEEH- 107 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i-~~V~~i~gDIt~~~~~~~l~~~L~~~- 107 (832)
.++.+|||||||+|.++..++..+|.++.|+|||+++-. .+ .+|.++++|+.+. +. .+...
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~-----l~-~l~~~~ 151 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPV-----LD-EMIKDE 151 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHH-----HH-HHHHSG
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHH-----HH-HHHhcc
Confidence 356899999999999999999998877899999999721 22 3588999987642 11 11100
Q ss_pred -cCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEE
Q 003302 108 -GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTK 158 (832)
Q Consensus 108 -~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~K 158 (832)
..+.||+|++|+... + ....+..+.++|+|||+|++.
T Consensus 152 ~~~~~fD~V~~d~~~~-------~-------~~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 152 KNHGSYDFIFVDADKD-------N-------YLNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp GGTTCBSEEEECSCST-------T-------HHHHHHHHHHHBCTTCCEEEE
T ss_pred CCCCCEEEEEEcCchH-------H-------HHHHHHHHHHhCCCCeEEEEe
Confidence 026789999996411 1 124566788999999999974
No 179
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.68 E-value=6e-08 Score=102.74 Aligned_cols=104 Identities=17% Similarity=0.193 Sum_probs=66.6
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCC-CC-----CCCCceEEEccCCChhHHHHHHHHHhhccCCccc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVP-IA-----PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFD 113 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp-~~-----~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FD 113 (832)
+.++.+|||||||+|.++..|+.. ++.|+|||+++ |. ..... ++++++.+.... +.....+.||
T Consensus 43 l~~g~~VLDlGcGtG~~a~~La~~---g~~V~gvD~S~~ml~~Ar~~~~~~-~v~~~~~~~~~~------~~~~~~~~fD 112 (261)
T 3iv6_A 43 IVPGSTVAVIGASTRFLIEKALER---GASVTVFDFSQRMCDDLAEALADR-CVTIDLLDITAE------IPKELAGHFD 112 (261)
T ss_dssp CCTTCEEEEECTTCHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTSSS-CCEEEECCTTSC------CCGGGTTCCS
T ss_pred CCCcCEEEEEeCcchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHhc-cceeeeeecccc------cccccCCCcc
Confidence 467899999999999999999986 46999999997 32 11111 234444332110 0000116789
Q ss_pred EEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCC
Q 003302 114 LVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQ 163 (832)
Q Consensus 114 lVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~ 163 (832)
+|+++...+ ++..+. ...++..+.++| |||+|++.+..+.
T Consensus 113 ~Vv~~~~l~---~~~~~~------~~~~l~~l~~lL-PGG~l~lS~~~g~ 152 (261)
T 3iv6_A 113 FVLNDRLIN---RFTTEE------ARRACLGMLSLV-GSGTVRASVKLGF 152 (261)
T ss_dssp EEEEESCGG---GSCHHH------HHHHHHHHHHHH-TTSEEEEEEEBSC
T ss_pred EEEEhhhhH---hCCHHH------HHHHHHHHHHhC-cCcEEEEEeccCc
Confidence 999986422 111211 245677788999 9999999765543
No 180
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.68 E-value=1.9e-08 Score=107.50 Aligned_cols=92 Identities=11% Similarity=0.031 Sum_probs=69.4
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCC-CceEEEccCCChhHHHHHHHHHhhc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIR-GAVSLEQDITKPECRARVKKVMEEH 107 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~-~V~~i~gDIt~~~~~~~l~~~L~~~ 107 (832)
+++|.+|||||||+|+|+..++... .+.|+|||++|.. .+. .|.++++|..+.. .
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g--~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~---------~-- 189 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYG--KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP---------G-- 189 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHT--CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC---------C--
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhc--CCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc---------c--
Confidence 5789999999999999999999873 4689999999731 333 4889999988742 1
Q ss_pred cCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEc
Q 003302 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVF 160 (832)
Q Consensus 108 ~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVF 160 (832)
.+.||.|+++.++.. . ..|..|+.+|++||++.+-.|
T Consensus 190 -~~~~D~Vi~~~p~~~-----~----------~~l~~a~~~lk~gG~ih~~~~ 226 (278)
T 3k6r_A 190 -ENIADRILMGYVVRT-----H----------EFIPKALSIAKDGAIIHYHNT 226 (278)
T ss_dssp -CSCEEEEEECCCSSG-----G----------GGHHHHHHHEEEEEEEEEEEE
T ss_pred -ccCCCEEEECCCCcH-----H----------HHHHHHHHHcCCCCEEEEEee
Confidence 167899999976432 1 123457789999999877444
No 181
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.68 E-value=2.4e-08 Score=106.43 Aligned_cols=141 Identities=16% Similarity=0.163 Sum_probs=91.0
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC--------C-------CCCceEEEccCCChhHHHHHHHHHh
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA--------P-------IRGAVSLEQDITKPECRARVKKVME 105 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~--------~-------i~~V~~i~gDIt~~~~~~~l~~~L~ 105 (832)
.++.+|||||||+|+++..++.+.+ ...|++||+++.. + .+++.++++|+... +.
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~---------l~ 146 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKS-VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKF---------LE 146 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHH---------HH
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHH---------HH
Confidence 4568999999999999999987643 5799999999621 1 36788999997642 11
Q ss_pred hccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCC----CHHHHHHHHHHcccceEE
Q 003302 106 EHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQ----DYSSVLYCLKQLFEKVEV 181 (832)
Q Consensus 106 ~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~----d~~~ll~~L~~~F~~V~~ 181 (832)
.. .+.||+|++|+....+. .... .....+..+.++|+|||.|++...... .+..+...++..|..|..
T Consensus 147 ~~-~~~fD~Ii~d~~~~~~~---~~~l----~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~ 218 (283)
T 2i7c_A 147 NV-TNTYDVIIVDSSDPIGP---AETL----FNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEY 218 (283)
T ss_dssp HC-CSCEEEEEEECCCTTTG---GGGG----SSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEE
T ss_pred hC-CCCceEEEEcCCCCCCc---chhh----hHHHHHHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHHHHHCCceEE
Confidence 11 26789999996421111 0000 014567789999999999998643221 234455667777987765
Q ss_pred ecC-CCCCCCCcceeEEEe
Q 003302 182 DKP-AASRSASAEIYLLGI 199 (832)
Q Consensus 182 ~KP-~sSR~~SaEiyvVc~ 199 (832)
+.. ..+.+..--.|++|.
T Consensus 219 ~~~~vP~y~~g~~g~~~~s 237 (283)
T 2i7c_A 219 ANISIPTYPCGCIGILCCS 237 (283)
T ss_dssp EEEECTTSGGGEEEEEEEE
T ss_pred EEEEcCCcCCCcEEEEEEe
Confidence 422 222222223577775
No 182
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.67 E-value=2e-08 Score=98.11 Aligned_cols=104 Identities=20% Similarity=0.148 Sum_probs=68.6
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CC-CCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PI-RGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i-~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
.++.+|||+|||+|.++..++.. + ...|+|||+++.. .+ +++.++++|+.+... .+.. .
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~------~~~~-~ 113 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSR-G-MDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALE------QFYE-E 113 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHH------HHHH-T
T ss_pred cCCCCEEEeCCccCHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHH------HHHh-c
Confidence 46789999999999999988774 2 4699999999721 22 468899999875321 1110 1
Q ss_pred CCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCC
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQ 163 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~ 163 (832)
.+.||+|+++++.. ...... ....+ .+.++|+|||+|++.+....
T Consensus 114 ~~~fD~i~~~~~~~---~~~~~~------~~~~l-~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 114 KLQFDLVLLDPPYA---KQEIVS------QLEKM-LERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp TCCEEEEEECCCGG---GCCHHH------HHHHH-HHTTCEEEEEEEEEEEETTC
T ss_pred CCCCCEEEECCCCC---chhHHH------HHHHH-HHhcccCCCCEEEEEeCCcc
Confidence 26789999997521 011111 11222 24789999999998665443
No 183
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.67 E-value=2.9e-08 Score=95.43 Aligned_cols=102 Identities=12% Similarity=0.014 Sum_probs=68.3
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
.++.+|||+|||+|.++..++...+ .|+|||+++.. .+ ++.++++|+.+... .+.. ..
T Consensus 40 ~~~~~vLD~GcG~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~------~~~~-~~ 108 (171)
T 1ws6_A 40 PRRGRFLDPFAGSGAVGLEAASEGW---EAVLVEKDPEAVRLLKENVRRTGL-GARVVALPVEVFLP------EAKA-QG 108 (171)
T ss_dssp TTCCEEEEETCSSCHHHHHHHHTTC---EEEEECCCHHHHHHHHHHHHHHTC-CCEEECSCHHHHHH------HHHH-TT
T ss_pred cCCCeEEEeCCCcCHHHHHHHHCCC---eEEEEeCCHHHHHHHHHHHHHcCC-ceEEEeccHHHHHH------hhhc-cC
Confidence 3678999999999999999998743 49999999721 22 78899999875211 1111 01
Q ss_pred CcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCC
Q 003302 110 RAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQD 164 (832)
Q Consensus 110 ~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d 164 (832)
..||+|+++++.. .. ... +...+.. .++|+|||+|++.+.....
T Consensus 109 ~~~D~i~~~~~~~--~~-~~~-------~~~~~~~-~~~L~~gG~~~~~~~~~~~ 152 (171)
T 1ws6_A 109 ERFTVAFMAPPYA--MD-LAA-------LFGELLA-SGLVEAGGLYVLQHPKDLY 152 (171)
T ss_dssp CCEEEEEECCCTT--SC-TTH-------HHHHHHH-HTCEEEEEEEEEEEETTSC
T ss_pred CceEEEEECCCCc--hh-HHH-------HHHHHHh-hcccCCCcEEEEEeCCccC
Confidence 3689999997532 11 111 1122222 5999999999997665443
No 184
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.67 E-value=5.2e-08 Score=101.52 Aligned_cols=103 Identities=15% Similarity=0.140 Sum_probs=70.3
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-------C----------CC-CCceEEEcc-CCChhHHHHH
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-------A----------PI-RGAVSLEQD-ITKPECRARV 100 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-------~----------~i-~~V~~i~gD-It~~~~~~~l 100 (832)
+.++.+|||||||+|.++..++...++.+.|+|||+++. . .+ +++.++++| +.....
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---- 116 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLG---- 116 (275)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCG----
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccC----
Confidence 467899999999999999999998655679999999983 1 12 468889998 432110
Q ss_pred HHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCC
Q 003302 101 KKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRS 162 (832)
Q Consensus 101 ~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs 162 (832)
.+. .+.||+|++.+... +..+. ..++..+..+++|||+|++..+..
T Consensus 117 --~~~---~~~fD~v~~~~~l~----~~~~~-------~~~~~~~~~l~~~gG~l~~~~~~~ 162 (275)
T 3bkx_A 117 --PIA---DQHFDRVVLAHSLW----YFASA-------NALALLFKNMAAVCDHVDVAEWSM 162 (275)
T ss_dssp --GGT---TCCCSEEEEESCGG----GSSCH-------HHHHHHHHHHTTTCSEEEEEEECS
T ss_pred --CCC---CCCEEEEEEccchh----hCCCH-------HHHHHHHHHHhCCCCEEEEEEecC
Confidence 011 26789999986432 11111 123445566777799999866543
No 185
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.67 E-value=5.9e-08 Score=107.97 Aligned_cols=122 Identities=16% Similarity=0.175 Sum_probs=80.6
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----------CCCC-CceEEEccCCChhHHHHHHHHHhhcc
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----------APIR-GAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----------~~i~-~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
.++.+|||||||+|+++..++.. + ...|+|||+++. ..+. ++.++++|+.+.. .. +.. .
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~-g-~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~-----~~-~~~-~ 286 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIA-G-ADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEM-----EK-LQK-K 286 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHH-----HH-HHH-T
T ss_pred hCCCeEEEecCCCCHHHHHHHHC-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHH-----HH-HHh-h
Confidence 47899999999999999999986 2 459999999962 1344 6889999987532 11 110 1
Q ss_pred CCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCC-CHHHHHHHHH
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQ-DYSSVLYCLK 173 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~-d~~~ll~~L~ 173 (832)
...||+|++|++....+. .........+...+..+.++|+|||+|++...... ....+...+.
T Consensus 287 ~~~fD~Vi~dpP~~~~~~--~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~v~ 350 (396)
T 2as0_A 287 GEKFDIVVLDPPAFVQHE--KDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVDLQMFKDMII 350 (396)
T ss_dssp TCCEEEEEECCCCSCSSG--GGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSCHHHHHHHHH
T ss_pred CCCCCEEEECCCCCCCCH--HHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCCHHHHHHHHH
Confidence 157899999975322111 11122223445678889999999999998665432 3333444443
No 186
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.67 E-value=2.3e-08 Score=107.06 Aligned_cols=108 Identities=19% Similarity=0.133 Sum_probs=73.7
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-C-----------------CCCCceEEEccCCChhHHHHHHH
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-A-----------------PIRGAVSLEQDITKPECRARVKK 102 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-~-----------------~i~~V~~i~gDIt~~~~~~~l~~ 102 (832)
.++.+|||||||+|.++..++.. ....|+|||+++. . ...++.++++|+.+.....
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~---- 106 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG--RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLID---- 106 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTT----
T ss_pred CCCCEEEEECCCCcHHHHHHHhc--CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhh----
Confidence 46789999999999999988874 2569999999962 1 1236889999998753100
Q ss_pred HHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCC
Q 003302 103 VMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRS 162 (832)
Q Consensus 103 ~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs 162 (832)
.+.. ..+.||+|+|..+. +|.... ......+|..+.++|+|||.|++.++..
T Consensus 107 ~~~~-~~~~fD~V~~~~~l----~~~~~~---~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 107 KFRD-PQMCFDICSCQFVC----HYSFES---YEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp TCSS-TTCCEEEEEEETCG----GGGGGS---HHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred hccc-CCCCEEEEEEecch----hhccCC---HHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 0110 11479999997642 343111 1223467888999999999999976654
No 187
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.67 E-value=9.5e-08 Score=103.87 Aligned_cols=142 Identities=17% Similarity=0.172 Sum_probs=92.0
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC---------CC------CCCceEEEccCCChhHHHHHHHHHh
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI---------AP------IRGAVSLEQDITKPECRARVKKVME 105 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~---------~~------i~~V~~i~gDIt~~~~~~~l~~~L~ 105 (832)
.++.+|||||||+|+++..++.+.+ ...|+|||+++. .. .+++.++++|+... +.
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~---------l~ 184 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKS-VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKF---------LE 184 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHH---------HH
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHH---------Hh
Confidence 3567999999999999999987644 579999999962 11 25688999997642 11
Q ss_pred hccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCC-C---HHHHHHHHHHcccceEE
Q 003302 106 EHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQ-D---YSSVLYCLKQLFEKVEV 181 (832)
Q Consensus 106 ~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~-d---~~~ll~~L~~~F~~V~~ 181 (832)
. ..+.||+|++|+....+. .... .....+..+.++|+|||+|++.+.... + +..+...+...|..+..
T Consensus 185 ~-~~~~fDvIi~d~~~p~~~---~~~l----~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~ 256 (321)
T 2pt6_A 185 N-VTNTYDVIIVDSSDPIGP---AETL----FNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEY 256 (321)
T ss_dssp H-CCSCEEEEEEECCCSSSG---GGGG----SSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTTCSEEEE
T ss_pred h-cCCCceEEEECCcCCCCc---chhh----hHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCCeEE
Confidence 1 126789999997421110 0110 014567788999999999999654332 2 34455667777888765
Q ss_pred ec-CCCCCCCCcceeEEEee
Q 003302 182 DK-PAASRSASAEIYLLGIK 200 (832)
Q Consensus 182 ~K-P~sSR~~SaEiyvVc~g 200 (832)
+. +..+.+...-.|++|..
T Consensus 257 ~~~~vp~~~~g~w~f~~as~ 276 (321)
T 2pt6_A 257 ANISIPTYPCGCIGILCCSK 276 (321)
T ss_dssp EEEECTTSGGGEEEEEEEES
T ss_pred EEEEeccccCceEEEEEeeC
Confidence 53 22233222345777754
No 188
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.66 E-value=1.4e-08 Score=105.29 Aligned_cols=106 Identities=13% Similarity=0.114 Sum_probs=70.5
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-------------------CCCCceEEEccCCChhHHHHHH
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-------------------PIRGAVSLEQDITKPECRARVK 101 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-------------------~i~~V~~i~gDIt~~~~~~~l~ 101 (832)
.++.+|||||||+|+++..++...+ .+.|+|||+++.. .++++.++++|+.+.- .
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l-----~ 121 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFP-EDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFL-----P 121 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHST-TSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCG-----G
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCC-CCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHH-----H
Confidence 3678999999999999999999875 5799999999620 4568999999998621 0
Q ss_pred HHHhhccCCcccEEEeCCCCCCCCCchhHH-hHHhHHHHHHHHHHHhhcccCcEEEEEE
Q 003302 102 KVMEEHGVRAFDLVLHDGSPNVGGAWAQEA-MSQNALVIDSVKLATQFLAPKGTFVTKV 159 (832)
Q Consensus 102 ~~L~~~~~~~FDlVlsDgapnv~g~w~~D~-~~q~~L~~~aLk~A~~~LkpGG~fV~KV 159 (832)
..+. .+.||.|++..++ .|.... .....+...++..+.++|+|||.|++.+
T Consensus 122 ~~~~---~~~~d~v~~~~p~----p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 122 NFFE---KGQLSKMFFCFPD----PHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp GTSC---TTCEEEEEEESCC----CC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred Hhcc---ccccCEEEEECCC----cccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 1122 2567888765421 121100 0000001356778899999999999843
No 189
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.66 E-value=2.1e-08 Score=108.28 Aligned_cols=92 Identities=15% Similarity=0.096 Sum_probs=70.1
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----------CCCCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----------APIRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----------~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
+.++.+|||+|||+|.++..++...+..+.|+|||+++. ..++++.++++|+..... ..
T Consensus 73 ~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~--------~~-- 142 (317)
T 1dl5_A 73 LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVP--------EF-- 142 (317)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG--------GG--
T ss_pred CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccc--------cC--
Confidence 468899999999999999999988664578999999972 134678999999876321 11
Q ss_pred CCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEE
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKV 159 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KV 159 (832)
+.||+|+++++.. +.. ..+.++|+|||.|++.+
T Consensus 143 -~~fD~Iv~~~~~~----~~~-------------~~~~~~LkpgG~lvi~~ 175 (317)
T 1dl5_A 143 -SPYDVIFVTVGVD----EVP-------------ETWFTQLKEGGRVIVPI 175 (317)
T ss_dssp -CCEEEEEECSBBS----CCC-------------HHHHHHEEEEEEEEEEB
T ss_pred -CCeEEEEEcCCHH----HHH-------------HHHHHhcCCCcEEEEEE
Confidence 6789999997532 111 24568999999999864
No 190
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.66 E-value=1.6e-08 Score=101.62 Aligned_cols=104 Identities=14% Similarity=0.180 Sum_probs=72.7
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC----CCCCceEEEccCCChhHHHHHHHHHhhccCCcccEEE
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA----PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~----~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVl 116 (832)
.++.+|||+|||+|.++..++.. + ..|+|||+++.. ......++++|+.+... .+ ..+.||+|+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~--~~~~~~D~~~~~~~~~~~~~~~~~~~d~~~~~~------~~---~~~~fD~v~ 98 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G--TRVSGIEAFPEAAEQAKEKLDHVVLGDIETMDM------PY---EEEQFDCVI 98 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T--CEEEEEESSHHHHHHHHTTSSEEEESCTTTCCC------CS---CTTCEEEEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C--CeEEEEeCCHHHHHHHHHhCCcEEEcchhhcCC------CC---CCCccCEEE
Confidence 57889999999999999999887 3 699999999721 11124678889875210 01 126789999
Q ss_pred eCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHH
Q 003302 117 HDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSS 167 (832)
Q Consensus 117 sDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ 167 (832)
+..... +..+ ...+|..+.++|+|||+|++.+.....+..
T Consensus 99 ~~~~l~----~~~~-------~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~ 138 (230)
T 3cc8_A 99 FGDVLE----HLFD-------PWAVIEKVKPYIKQNGVILASIPNVSHISV 138 (230)
T ss_dssp EESCGG----GSSC-------HHHHHHHTGGGEEEEEEEEEEEECTTSHHH
T ss_pred ECChhh----hcCC-------HHHHHHHHHHHcCCCCEEEEEeCCcchHHH
Confidence 975321 1111 135677889999999999997766555443
No 191
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.65 E-value=3.1e-08 Score=99.59 Aligned_cols=92 Identities=17% Similarity=0.203 Sum_probs=69.1
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
+.++.+|||+|||+|.++..++...++.+.|+|||+++-. .++++.++++|+.... ..
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~---------~~-- 143 (215)
T 2yxe_A 75 LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGY---------EP-- 143 (215)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCC---------GG--
T ss_pred CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCC---------CC--
Confidence 4678899999999999999999987555799999999621 2467889999985421 10
Q ss_pred CCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEE
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKV 159 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KV 159 (832)
.+.||+|++++... +.. ..+.++|+|||+|++.+
T Consensus 144 ~~~fD~v~~~~~~~----~~~-------------~~~~~~L~pgG~lv~~~ 177 (215)
T 2yxe_A 144 LAPYDRIYTTAAGP----KIP-------------EPLIRQLKDGGKLLMPV 177 (215)
T ss_dssp GCCEEEEEESSBBS----SCC-------------HHHHHTEEEEEEEEEEE
T ss_pred CCCeeEEEECCchH----HHH-------------HHHHHHcCCCcEEEEEE
Confidence 15789999986422 111 25678999999999855
No 192
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.65 E-value=2.7e-08 Score=101.94 Aligned_cols=112 Identities=15% Similarity=0.189 Sum_probs=76.8
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CC-CCceEEEccCCChhHHHHHHHHHhhc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PI-RGAVSLEQDITKPECRARVKKVMEEH 107 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i-~~V~~i~gDIt~~~~~~~l~~~L~~~ 107 (832)
+.++.+|||+|||+|.++..++.. .+.|+|+|+++-. .+ +++.++++|+.... +..
T Consensus 89 ~~~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--------~~~- 156 (248)
T 2yvl_A 89 LNKEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE--------VPE- 156 (248)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC--------CCT-
T ss_pred CCCCCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc--------cCC-
Confidence 457889999999999999999988 5699999999621 23 57888999987631 011
Q ss_pred cCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHHHHHcccceEE
Q 003302 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEV 181 (832)
Q Consensus 108 ~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~L~~~F~~V~~ 181 (832)
+.||+|+++++ + . ..++..+.++|+|||+|++.+........+...+...|..+..
T Consensus 157 --~~~D~v~~~~~-~------~---------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~f~~~~~ 212 (248)
T 2yvl_A 157 --GIFHAAFVDVR-E------P---------WHYLEKVHKSLMEGAPVGFLLPTANQVIKLLESIENYFGNLEV 212 (248)
T ss_dssp --TCBSEEEECSS-C------G---------GGGHHHHHHHBCTTCEEEEEESSHHHHHHHHHHSTTTEEEEEE
T ss_pred --CcccEEEECCc-C------H---------HHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCcceE
Confidence 56899999753 1 1 1235677899999999998554332333444444333444433
No 193
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.65 E-value=6.2e-08 Score=99.93 Aligned_cols=126 Identities=11% Similarity=0.097 Sum_probs=81.1
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-C-------CCCC-----------------------------
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-A-------PIRG----------------------------- 83 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-~-------~i~~----------------------------- 83 (832)
.++.+|||||||+|.++..++...+ ..|+|||+++. . ...+
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 4578999999999999988876532 48999999962 1 1111
Q ss_pred ---c-eEEEccCCChhHHHHHHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEE
Q 003302 84 ---A-VSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKV 159 (832)
Q Consensus 84 ---V-~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KV 159 (832)
+ .++++|+++... +.....+.||+|++...... ...+ ......+|..+.++|+|||+|++..
T Consensus 133 ~~~v~~~~~~d~~~~~~-------~~~~~~~~fD~v~~~~~l~~----~~~~---~~~~~~~l~~~~~~LkpgG~li~~~ 198 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQP-------LGGVSLPPADCLLSTLCLDA----ACPD---LPAYRTALRNLGSLLKPGGFLVMVD 198 (265)
T ss_dssp HHHEEEEEECCTTSSST-------TTTCCCCCEEEEEEESCHHH----HCSS---HHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhhheeEEEeeeccCCC-------CCccccCCccEEEEhhhhhh----hcCC---hHHHHHHHHHHHhhCCCCcEEEEEe
Confidence 6 889999987431 11111157899999753110 0001 1223567888999999999999865
Q ss_pred cC---------------CCCHHHHHHHHHHc-ccceEEe
Q 003302 160 FR---------------SQDYSSVLYCLKQL-FEKVEVD 182 (832)
Q Consensus 160 Fr---------------s~d~~~ll~~L~~~-F~~V~~~ 182 (832)
+. ..+...+..+|... |..+.+.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 237 (265)
T 2i62_A 199 ALKSSYYMIGEQKFSSLPLGWETVRDAVEEAGYTIEQFE 237 (265)
T ss_dssp ESSCCEEEETTEEEECCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCceEEcCCccccccccCHHHHHHHHHHCCCEEEEEE
Confidence 22 12334666777655 7655543
No 194
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.62 E-value=5.3e-08 Score=102.94 Aligned_cols=123 Identities=12% Similarity=0.089 Sum_probs=74.2
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCC-CCC-----C-------------------CC-------------
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVP-IAP-----I-------------------RG------------- 83 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp-~~~-----i-------------------~~------------- 83 (832)
++.+|||||||||.++..++.. ....|+|||+++ |.. + .+
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 148 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACS--HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLR 148 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGG--GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhcc--CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHH
Confidence 6789999999999955444432 245999999997 210 0 01
Q ss_pred ---ceEEEccCCC-hhHHHHHHHHHhh--ccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 84 ---AVSLEQDITK-PECRARVKKVMEE--HGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 84 ---V~~i~gDIt~-~~~~~~l~~~L~~--~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
+.++++|+++ .+ +.. ...++||+|++.... .|.... ..-...+|..+.++|+|||+|++
T Consensus 149 ~~~~~~~~~D~~~~~~--------~~~~~~~~~~fD~V~~~~~l----~~~~~~---~~~~~~~l~~~~r~LkpGG~l~~ 213 (289)
T 2g72_A 149 ARVKRVLPIDVHQPQP--------LGAGSPAPLPADALVSAFCL----EAVSPD---LASFQRALDHITTLLRPGGHLLL 213 (289)
T ss_dssp HHEEEEECCCTTSSST--------TCSSCSSCSSEEEEEEESCH----HHHCSS---HHHHHHHHHHHHTTEEEEEEEEE
T ss_pred hhhceEEecccCCCCC--------ccccccCCCCCCEEEehhhh----hhhcCC---HHHHHHHHHHHHHhcCCCCEEEE
Confidence 2355567765 21 000 111569999997531 121000 11235678899999999999998
Q ss_pred EEc---------------CCCCHHHHHHHHHHc-ccceEE
Q 003302 158 KVF---------------RSQDYSSVLYCLKQL-FEKVEV 181 (832)
Q Consensus 158 KVF---------------rs~d~~~ll~~L~~~-F~~V~~ 181 (832)
... ...+...+..+|... |..+.+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~ 253 (289)
T 2g72_A 214 IGALEESWYLAGEARLTVVPVSEEEVREALVRSGYKVRDL 253 (289)
T ss_dssp EEEESCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEE
T ss_pred EEecCcceEEcCCeeeeeccCCHHHHHHHHHHcCCeEEEe
Confidence 421 122445666777655 765544
No 195
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.62 E-value=2e-07 Score=96.45 Aligned_cols=136 Identities=7% Similarity=-0.002 Sum_probs=83.4
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----------CCCC-CceEEEccCCChhHHHHHHHHHhhccC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----------APIR-GAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----------~~i~-~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
++.+|||||||+|.++..++...+ ++.|+|||+++. ..+. ++.++++|+.+.-. ..+.....
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-----~~~~~~~~ 138 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLN-GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLM-----DALKEESE 138 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSST-----TTSTTCCS
T ss_pred CCCEEEEeCCChhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhh-----hhhhcccC
Confidence 577999999999999998888764 479999999972 1233 38999999765200 00111001
Q ss_pred CcccEEEeCCCCCCCCCc-h-----------hH-Hh-----------HHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCH
Q 003302 110 RAFDLVLHDGSPNVGGAW-A-----------QE-AM-----------SQNALVIDSVKLATQFLAPKGTFVTKVFRSQDY 165 (832)
Q Consensus 110 ~~FDlVlsDgapnv~g~w-~-----------~D-~~-----------~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~ 165 (832)
..||+|++|++....+.+ . .. .+ -.+.++...+..+..+|+++|++++.+-.....
T Consensus 139 ~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~ 218 (254)
T 2h00_A 139 IIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLGKKCSL 218 (254)
T ss_dssp CCBSEEEECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHHHHHHGGGBSCEEEEESSTTSH
T ss_pred CcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHHHHhcccceEEEEECCCChhHH
Confidence 468999999754322200 0 00 00 112233445555677889999888755444444
Q ss_pred HHHHHHHHHc-ccceEEec
Q 003302 166 SSVLYCLKQL-FEKVEVDK 183 (832)
Q Consensus 166 ~~ll~~L~~~-F~~V~~~K 183 (832)
..+...|... |..|.+..
T Consensus 219 ~~~~~~l~~~Gf~~v~~~~ 237 (254)
T 2h00_A 219 APLKEELRIQGVPKVTYTE 237 (254)
T ss_dssp HHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHHcCCCceEEEE
Confidence 5666666654 87777653
No 196
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.62 E-value=3.9e-08 Score=117.59 Aligned_cols=107 Identities=15% Similarity=0.118 Sum_probs=72.8
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----------CCCC--CceEEEccCCChhHHHHHHHHHhhcc
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----------APIR--GAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----------~~i~--~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
+|.+|||||||+|+|+.+++.. + ...|+|||+++. +.+. ++.++++|+.+. +.. .
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~-g-a~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~---------l~~-~ 606 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLG-G-ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAW---------LRE-A 606 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHH---------HHH-C
T ss_pred CCCcEEEeeechhHHHHHHHHC-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHH---------HHh-c
Confidence 6889999999999999998874 2 457999999962 1333 689999998752 111 1
Q ss_pred CCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEc
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVF 160 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVF 160 (832)
.+.||+|++|++....+....+.+.........+..+.++|+|||+|++..-
T Consensus 607 ~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~ 658 (703)
T 3v97_A 607 NEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNN 658 (703)
T ss_dssp CCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 2679999999853221111011111123345678889999999999998653
No 197
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.62 E-value=6.4e-08 Score=105.59 Aligned_cols=117 Identities=15% Similarity=0.219 Sum_probs=78.7
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCC----CEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHh
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVG----SLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVME 105 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~----~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~ 105 (832)
.++.+|||+|||+|+++..++..++.. ..|+|+|+++.. .+ ++.++++|.....
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~-~~~i~~~D~l~~~---------- 197 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ-KMTLLHQDGLANL---------- 197 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC-CCEEEESCTTSCC----------
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC-CceEEECCCCCcc----------
Confidence 356799999999999999998887532 689999999731 22 5788899987631
Q ss_pred hccCCcccEEEeCCCCCCCCCchhHHhH----------HhHHHHHHHHHHHhhcccCcEEEEEE----cCCCCHHHHHHH
Q 003302 106 EHGVRAFDLVLHDGSPNVGGAWAQEAMS----------QNALVIDSVKLATQFLAPKGTFVTKV----FRSQDYSSVLYC 171 (832)
Q Consensus 106 ~~~~~~FDlVlsDgapnv~g~w~~D~~~----------q~~L~~~aLk~A~~~LkpGG~fV~KV----Frs~d~~~ll~~ 171 (832)
....||+|++|+++.+ |..+... ........+..+..+|+|||++++.+ |.+.....+...
T Consensus 198 --~~~~fD~Ii~NPPfg~---~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~ 272 (344)
T 2f8l_A 198 --LVDPVDVVISDLPVGY---YPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKF 272 (344)
T ss_dssp --CCCCEEEEEEECCCSE---ESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHHHHHHH
T ss_pred --ccCCccEEEECCCCCC---cCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHHHHHHH
Confidence 1267899999987432 2111100 00012346778899999999999865 455555555444
Q ss_pred HH
Q 003302 172 LK 173 (832)
Q Consensus 172 L~ 173 (832)
|.
T Consensus 273 l~ 274 (344)
T 2f8l_A 273 IK 274 (344)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 198
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.62 E-value=7.2e-08 Score=104.07 Aligned_cols=142 Identities=16% Similarity=0.134 Sum_probs=89.9
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC--------C-------CCCceEEEccCCChhHHHHHHHHHh
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA--------P-------IRGAVSLEQDITKPECRARVKKVME 105 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~--------~-------i~~V~~i~gDIt~~~~~~~l~~~L~ 105 (832)
..+.+|||||||+|+++..++.+.+ ...|++||+++.. + .+++.++++|+... +.
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~---------l~ 163 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPS-VESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEF---------MK 163 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHH---------HH
T ss_pred CCCCEEEEECCCchHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHH---------Hh
Confidence 4568999999999999999987744 5799999999621 1 35788899987541 11
Q ss_pred hccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCC----HHHHHHHHHHcccceEE
Q 003302 106 EHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQD----YSSVLYCLKQLFEKVEV 181 (832)
Q Consensus 106 ~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d----~~~ll~~L~~~F~~V~~ 181 (832)
. ..+.||+|++|+....+ ... .......+..+.++|+|||.|++....... ...+...++..|..+..
T Consensus 164 ~-~~~~fD~Ii~d~~~~~~----~~~---~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~ 235 (304)
T 2o07_A 164 Q-NQDAFDVIITDSSDPMG----PAE---SLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLFPVVAY 235 (304)
T ss_dssp T-CSSCEEEEEEECC------------------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHHHHHCSEEEE
T ss_pred h-CCCCceEEEECCCCCCC----cch---hhhHHHHHHHHHhccCCCeEEEEecCCcccchHHHHHHHHHHHHhCCCcee
Confidence 1 12679999999642111 100 001235677889999999999986533221 23455667788987765
Q ss_pred ec-CCCCCCCCcceeEEEee
Q 003302 182 DK-PAASRSASAEIYLLGIK 200 (832)
Q Consensus 182 ~K-P~sSR~~SaEiyvVc~g 200 (832)
+- ...+.+...-.|++|..
T Consensus 236 ~~~~vP~~~~g~~g~~~as~ 255 (304)
T 2o07_A 236 AYCTIPTYPSGQIGFMLCSK 255 (304)
T ss_dssp EEEECTTSGGGEEEEEEEES
T ss_pred EEEEeccccCcceEEEEEeC
Confidence 42 12222222235777763
No 199
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.60 E-value=5.1e-08 Score=100.89 Aligned_cols=98 Identities=10% Similarity=0.129 Sum_probs=71.2
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCC-CceEEEccCCChhHHHHHHHHHhhc-
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIR-GAVSLEQDITKPECRARVKKVMEEH- 107 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~-~V~~i~gDIt~~~~~~~l~~~L~~~- 107 (832)
.++.+|||+|||+|+++..++..+|.++.|++||+++.. .+. +|.++++|+.+. +. .+...
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~-----l~-~l~~~~ 142 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLA-----LD-NLLQGQ 142 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH-----HH-HHHHST
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH-----HH-HHHhcc
Confidence 356899999999999999999998878899999999721 232 488899987642 11 12110
Q ss_pred -cCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEE
Q 003302 108 -GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTK 158 (832)
Q Consensus 108 -~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~K 158 (832)
..+.||+|++|+.. . . ....+..+.++|+|||.|++.
T Consensus 143 ~~~~~fD~I~~d~~~-------~-~------~~~~l~~~~~~L~pGG~lv~d 180 (237)
T 3c3y_A 143 ESEGSYDFGFVDADK-------P-N------YIKYHERLMKLVKVGGIVAYD 180 (237)
T ss_dssp TCTTCEEEEEECSCG-------G-G------HHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCcCEEEECCch-------H-H------HHHHHHHHHHhcCCCeEEEEe
Confidence 02678999998631 1 1 134567788999999999984
No 200
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.60 E-value=2.2e-08 Score=109.89 Aligned_cols=96 Identities=16% Similarity=0.277 Sum_probs=69.7
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC----------CCCC-ceEEEccCCChhHHHHHHHHHhhccC
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA----------PIRG-AVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~----------~i~~-V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
.++.+|||||||+|.++..++.. + ...|+|||++++. .+.+ |.++++|+.+.. +. .
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~-g-~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~---~ 131 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKA-G-ARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVE--------LP---V 131 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHT-T-CSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCC--------CS---S
T ss_pred CCCCEEEEEeccchHHHHHHHHC-C-CCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHcc--------CC---C
Confidence 46889999999999999999987 3 4699999999742 2333 899999998753 11 2
Q ss_pred CcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 110 RAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 110 ~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
+.||+|+++..... ..+.. ....++..+.++|+|||.|+.
T Consensus 132 ~~fD~Iis~~~~~~-l~~~~-------~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 132 EKVDIIISEWMGYC-LFYES-------MLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp SCEEEEEECCCBBT-BTBTC-------CHHHHHHHHHHHEEEEEEEES
T ss_pred CceEEEEEcccccc-ccCch-------hHHHHHHHHHHhCCCCCEEcc
Confidence 67899999853211 11111 123566778899999999974
No 201
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.60 E-value=5e-09 Score=107.46 Aligned_cols=90 Identities=17% Similarity=0.106 Sum_probs=64.9
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CC-CCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PI-RGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i-~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
++.+|||||||+|+++..++.. ++.|+|||+++.. .+ +++.++++|+.+.. ..
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---------~~--- 142 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALT---GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA---------SF--- 142 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG---------GG---
T ss_pred CCCEEEECccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc---------cc---
Confidence 7889999999999999999986 4799999999721 23 47899999987632 12
Q ss_pred CcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 110 RAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 110 ~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
+.||+|+++++..... +.. ..+..+.++|+|||.+++
T Consensus 143 ~~~D~v~~~~~~~~~~----~~~-------~~~~~~~~~L~pgG~~i~ 179 (241)
T 3gdh_A 143 LKADVVFLSPPWGGPD----YAT-------AETFDIRTMMSPDGFEIF 179 (241)
T ss_dssp CCCSEEEECCCCSSGG----GGG-------SSSBCTTTSCSSCHHHHH
T ss_pred CCCCEEEECCCcCCcc----hhh-------hHHHHHHhhcCCcceeHH
Confidence 6789999997643211 110 122345678999998664
No 202
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.59 E-value=5.7e-08 Score=97.90 Aligned_cols=96 Identities=14% Similarity=0.115 Sum_probs=65.2
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----------CCCCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----------APIRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----------~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
++.+|||||||+|.++..++... ...|+|||+++. ..++++.++++|+.+. +.. ..+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~--~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~---------~~~-~~~ 121 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY--AAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSF---------LAQ-KGT 121 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHH---------HSS-CCC
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC--CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHH---------Hhh-cCC
Confidence 57899999999999999877653 348999999972 1235789999997652 111 125
Q ss_pred cccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHH--HhhcccCcEEEEEEcC
Q 003302 111 AFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLA--TQFLAPKGTFVTKVFR 161 (832)
Q Consensus 111 ~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A--~~~LkpGG~fV~KVFr 161 (832)
.||+|++|++... + . ...++..+ .++|+|||.|++....
T Consensus 122 ~fD~V~~~~p~~~-~--~---------~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 122 PHNIVFVDPPFRR-G--L---------LEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp CEEEEEECCSSST-T--T---------HHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred CCCEEEECCCCCC-C--c---------HHHHHHHHHhcCccCCCcEEEEEECC
Confidence 7899999975221 1 0 11223333 3469999999985543
No 203
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.59 E-value=3.7e-08 Score=100.73 Aligned_cols=95 Identities=14% Similarity=0.148 Sum_probs=70.9
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CC-CCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PI-RGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i-~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
.++.+|||+|||+|.++..++..+| ++.|+|||+++.. .+ .++.++++|+..... .+. .
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~------~~~--~ 123 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALP-EATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGE------KLE--L 123 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHH------HHT--T
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHH------hcc--c
Confidence 4678999999999999999999987 6799999999621 23 358899999876311 110 0
Q ss_pred CCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEE
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTK 158 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~K 158 (832)
.+.||+|++++... ....++..+.++|+|||+|++.
T Consensus 124 ~~~fD~I~~~~~~~--------------~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 124 YPLFDVLFIDAAKG--------------QYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp SCCEEEEEEEGGGS--------------CHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCCccEEEECCCHH--------------HHHHHHHHHHHHcCCCeEEEEE
Confidence 15789999986421 1235667888999999999985
No 204
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.59 E-value=2.5e-07 Score=101.83 Aligned_cols=104 Identities=13% Similarity=0.281 Sum_probs=76.3
Q ss_pred HhhhhhcCCCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC----CCCCCceEEEccCCChhHHHHHHHHHhh
Q 003302 31 VQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI----APIRGAVSLEQDITKPECRARVKKVMEE 106 (832)
Q Consensus 31 iqi~~kf~fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~----~~i~~V~~i~gDIt~~~~~~~l~~~L~~ 106 (832)
..+...|.-+.++.+|||||||+|.++..++...| ...++++|+..+ ...++|.++++|+.++ +
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~-~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~---------~-- 265 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYP-LIKGINFDLPQVIENAPPLSGIEHVGGDMFAS---------V-- 265 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEECHHHHTTCCCCTTEEEEECCTTTC---------C--
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCC-CCeEEEeChHHHHHhhhhcCCCEEEeCCcccC---------C--
Confidence 34455565356778999999999999999999986 579999998322 2346899999999762 1
Q ss_pred ccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEE
Q 003302 107 HGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTK 158 (832)
Q Consensus 107 ~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~K 158 (832)
..||+|++.... .+|. +. .+..+|+.+.++|+|||+|++.
T Consensus 266 ---~~~D~v~~~~~l---h~~~-d~-----~~~~~l~~~~~~L~pgG~l~i~ 305 (372)
T 1fp1_D 266 ---PQGDAMILKAVC---HNWS-DE-----KCIEFLSNCHKALSPNGKVIIV 305 (372)
T ss_dssp ---CCEEEEEEESSG---GGSC-HH-----HHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---CCCCEEEEeccc---ccCC-HH-----HHHHHHHHHHHhcCCCCEEEEE
Confidence 227999987432 1122 21 1346788999999999999985
No 205
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.59 E-value=3.7e-08 Score=99.13 Aligned_cols=92 Identities=12% Similarity=0.011 Sum_probs=68.3
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CC-CCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PI-RGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i-~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
++.+|||+|||+|.++..++..++.++.|+|||+++-. .+ +++.++++|+... +... .
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---------~~~~-~ 125 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGI---------AAGQ-R 125 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHH---------HTTC-C
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHH---------hccC-C
Confidence 56799999999999999999988767899999999721 22 2488899987542 1111 1
Q ss_pred CcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEE
Q 003302 110 RAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTK 158 (832)
Q Consensus 110 ~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~K 158 (832)
+ ||+|++|+... + ....+..+.++|+|||.|++.
T Consensus 126 ~-fD~v~~~~~~~-------~-------~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 126 D-IDILFMDCDVF-------N-------GADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp S-EEEEEEETTTS-------C-------HHHHHHHHGGGEEEEEEEEEE
T ss_pred C-CCEEEEcCChh-------h-------hHHHHHHHHHhcCCCeEEEEE
Confidence 5 89999985311 0 134567788999999999973
No 206
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.58 E-value=8.9e-08 Score=106.10 Aligned_cols=96 Identities=13% Similarity=0.142 Sum_probs=69.4
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC----------CCC-CceEEEccCCChhHHHHHHHHHhhcc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA----------PIR-GAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~----------~i~-~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
+.++.+|||||||+|.++..++.. + ...|+|||++++. .+. +|.++++|+.+.. + .
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~-g-~~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~---~ 127 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQA-G-ARKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDIS--------L---P 127 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHT-T-CSEEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCC--------C---S
T ss_pred cCCCCEEEEeccCcCHHHHHHHhc-C-CCEEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcC--------c---C
Confidence 457889999999999999999987 2 3499999999652 233 4899999998743 1 1
Q ss_pred CCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
+.||+|+++..+.... +.. ....++..+.++|+|||.|++
T Consensus 128 -~~~D~Iv~~~~~~~l~-~e~-------~~~~~l~~~~~~LkpgG~li~ 167 (376)
T 3r0q_C 128 -EKVDVIISEWMGYFLL-RES-------MFDSVISARDRWLKPTGVMYP 167 (376)
T ss_dssp -SCEEEEEECCCBTTBT-TTC-------THHHHHHHHHHHEEEEEEEES
T ss_pred -CcceEEEEcChhhccc-chH-------HHHHHHHHHHhhCCCCeEEEE
Confidence 6789999976432211 100 123456777899999999985
No 207
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.58 E-value=1.4e-07 Score=94.30 Aligned_cols=106 Identities=11% Similarity=-0.025 Sum_probs=69.0
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
.++.+|||+|||+|.++..++.. + ...|+|||+++.. .+ ++.++++|+.+.+
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~-------------- 110 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLL-G-AKEVICVEVDKEAVDVLIENLGEFKG-KFKVFIGDVSEFN-------------- 110 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHTGGGTT-SEEEEESCGGGCC--------------
T ss_pred CCcCEEEEeeCCCCHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHHHHHcCC-CEEEEECchHHcC--------------
Confidence 46789999999999999999886 2 3489999999621 12 6899999987632
Q ss_pred CcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHHHHH
Q 003302 110 RAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQ 174 (832)
Q Consensus 110 ~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~L~~ 174 (832)
..||+|++|++...... . .....+..+.++| ||.+++.+-.......+...+..
T Consensus 111 ~~~D~v~~~~p~~~~~~---~------~~~~~l~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~ 164 (207)
T 1wy7_A 111 SRVDIVIMNPPFGSQRK---H------ADRPFLLKAFEIS--DVVYSIHLAKPEVRRFIEKFSWE 164 (207)
T ss_dssp CCCSEEEECCCCSSSST---T------TTHHHHHHHHHHC--SEEEEEEECCHHHHHHHHHHHHH
T ss_pred CCCCEEEEcCCCccccC---C------chHHHHHHHHHhc--CcEEEEEeCCcCCHHHHHHHHHH
Confidence 46899999987543221 0 0123455667777 66665532232223334444443
No 208
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.58 E-value=4.9e-08 Score=106.77 Aligned_cols=96 Identities=17% Similarity=0.236 Sum_probs=70.1
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC----------CC-CCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA----------PI-RGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~----------~i-~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
+.++.+|||||||+|.++..+++. + ...|+|||++++. .+ +++.++++|+.+.. +.
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~-g-~~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--------~~--- 128 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKA-G-AKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVH--------LP--- 128 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSC--------CS---
T ss_pred hcCCCEEEEeeccCcHHHHHHHHc-C-CCEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhc--------CC---
Confidence 356889999999999999999886 3 4599999999742 22 57899999998743 11
Q ss_pred CCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEE
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFV 156 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV 156 (832)
.+.||+|++++.+.. ..+. ..+..+|..+.++|+|||.|+
T Consensus 129 ~~~~D~Ivs~~~~~~-l~~~-------~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 129 VEKVDVIISEWMGYF-LLFE-------SMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp CSCEEEEEECCCBTT-BTTT-------CHHHHHHHHHHHHEEEEEEEE
T ss_pred CCcEEEEEEcCchhh-ccCH-------HHHHHHHHHHHhhcCCCcEEE
Confidence 257899999863221 1111 112356777889999999998
No 209
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.57 E-value=5.8e-08 Score=101.04 Aligned_cols=96 Identities=21% Similarity=0.236 Sum_probs=68.8
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-C-----CCCCceEEEccCCChhHHHHHHHHHhhccCCcccE
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-A-----PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-~-----~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDl 114 (832)
.++.+|||||||+|.++..++.. +..|+|||+++. . ...+ .++++|+.+.+ +. .+.||+
T Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~-~~~~~d~~~~~--------~~---~~~fD~ 117 (260)
T 2avn_A 53 KNPCRVLDLGGGTGKWSLFLQER---GFEVVLVDPSKEMLEVAREKGVK-NVVEAKAEDLP--------FP---SGAFEA 117 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHHTCS-CEEECCTTSCC--------SC---TTCEEE
T ss_pred CCCCeEEEeCCCcCHHHHHHHHc---CCeEEEEeCCHHHHHHHHhhcCC-CEEECcHHHCC--------CC---CCCEEE
Confidence 47889999999999999999876 468999999972 1 1112 27888987743 11 267899
Q ss_pred EEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcC
Q 003302 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFR 161 (832)
Q Consensus 115 VlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFr 161 (832)
|++.... .++..+ ...+|..+.++|+|||.|++.++.
T Consensus 118 v~~~~~~---~~~~~~-------~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 118 VLALGDV---LSYVEN-------KDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp EEECSSH---HHHCSC-------HHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred EEEcchh---hhcccc-------HHHHHHHHHHHcCCCeEEEEEeCC
Confidence 9986421 011111 346788899999999999987654
No 210
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.56 E-value=5.2e-08 Score=100.28 Aligned_cols=103 Identities=12% Similarity=0.133 Sum_probs=70.8
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCC-CceEEEccCCChhHHHHHHHH-----
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIR-GAVSLEQDITKPECRARVKKV----- 103 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~-~V~~i~gDIt~~~~~~~l~~~----- 103 (832)
.++.+|||||||+|.++..++..++.++.|+|||+++.. .+. ++.++++|+.... ..+...
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~--~~~~~~~~~~~ 136 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETL--QVLIDSKSAPS 136 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHH--HHHHHCSSCCG
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHH--HHHHhhccccc
Confidence 467899999999999999999998767899999999721 233 3888899876421 001000
Q ss_pred -HhhccC--CcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEE
Q 003302 104 -MEEHGV--RAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKV 159 (832)
Q Consensus 104 -L~~~~~--~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KV 159 (832)
...... +.||+|++++. ... ....+..+.++|+|||+|++..
T Consensus 137 ~~~~f~~~~~~fD~I~~~~~--------~~~------~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 137 WASDFAFGPSSIDLFFLDAD--------KEN------YPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp GGTTTCCSTTCEEEEEECSC--------GGG------HHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccccccCCCCCcCEEEEeCC--------HHH------HHHHHHHHHHHcCCCeEEEEEc
Confidence 000001 46899999853 111 1245678889999999999853
No 211
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.56 E-value=2.2e-07 Score=101.66 Aligned_cols=121 Identities=13% Similarity=0.167 Sum_probs=80.6
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC--------C-------CCCceEEEccCCChhHHHHHHHHHh
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA--------P-------IRGAVSLEQDITKPECRARVKKVME 105 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~--------~-------i~~V~~i~gDIt~~~~~~~l~~~L~ 105 (832)
..+.+|||||||+|+++..++.+.+ ...|++||+++.. + .+++.++++|+... +.
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~-~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~---------l~ 188 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHAS-IEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAF---------LK 188 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHH---------HH
T ss_pred CCCCEEEEECCCccHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHH---------HH
Confidence 4568999999999999999988744 5799999999621 1 25789999997642 11
Q ss_pred hccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCC-C---HHHHHHHHHHcccc
Q 003302 106 EHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQ-D---YSSVLYCLKQLFEK 178 (832)
Q Consensus 106 ~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~-d---~~~ll~~L~~~F~~ 178 (832)
....+.||+|++|+....+. .... .....+..+.++|+|||+|++..-... . +..++..++..|..
T Consensus 189 ~~~~~~fDlIi~d~~~p~~~---~~~l----~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~ 258 (334)
T 1xj5_A 189 NAAEGSYDAVIVDSSDPIGP---AKEL----FEKPFFQSVARALRPGGVVCTQAESLWLHMDIIEDIVSNCREIFKG 258 (334)
T ss_dssp TSCTTCEEEEEECCCCTTSG---GGGG----GSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCSS
T ss_pred hccCCCccEEEECCCCccCc---chhh----hHHHHHHHHHHhcCCCcEEEEecCCccccHHHHHHHHHHHHHhCcc
Confidence 11126789999997421111 1111 024567789999999999998532221 1 23445566777874
No 212
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.56 E-value=1.1e-07 Score=100.95 Aligned_cols=106 Identities=9% Similarity=0.156 Sum_probs=64.0
Q ss_pred CCCCCEEEEEcCCcCHHHHHH----HHhCCCCCEE--EEEeCCC-CC-----------CCCCceEE--EccCCChhHHHH
Q 003302 40 LRSSHAVLDLCAAPGGWMQVA----VQRVPVGSLV--LGLDLVP-IA-----------PIRGAVSL--EQDITKPECRAR 99 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~L----a~~~p~~~~V--iGVDLsp-~~-----------~i~~V~~i--~gDIt~~~~~~~ 99 (832)
..++.+|||+|||+|.++..+ +...+ +..| +|||+++ |. .++++.+. ++++.+..
T Consensus 50 ~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~-~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~---- 124 (292)
T 2aot_A 50 TKSEIKILSIGGGAGEIDLQILSKVQAQYP-GVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQ---- 124 (292)
T ss_dssp TCSEEEEEEETCTTSHHHHHHHHHHHHHST-TCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHH----
T ss_pred CCCCCeEEEEcCCCCHHHHHHHHHHHhhCC-CceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhh----
Confidence 356789999999999876533 33333 4544 9999996 21 23455443 33332110
Q ss_pred HHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCC
Q 003302 100 VKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRS 162 (832)
Q Consensus 100 l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs 162 (832)
.........++||+|++... .+|..|. ..+|+.+.++|+|||+|++.++..
T Consensus 125 -~~~~~~~~~~~fD~V~~~~~----l~~~~d~-------~~~l~~~~r~LkpgG~l~i~~~~~ 175 (292)
T 2aot_A 125 -SRMLEKKELQKWDFIHMIQM----LYYVKDI-------PATLKFFHSLLGTNAKMLIIVVSG 175 (292)
T ss_dssp -HHHHTTTCCCCEEEEEEESC----GGGCSCH-------HHHHHHHHHTEEEEEEEEEEEECT
T ss_pred -hhhccccCCCceeEEEEeee----eeecCCH-------HHHHHHHHHHcCCCcEEEEEEecC
Confidence 00000011267999999753 2343332 357888999999999999965543
No 213
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.55 E-value=8.5e-08 Score=104.09 Aligned_cols=141 Identities=13% Similarity=0.129 Sum_probs=87.8
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC---------CC------CCCceEEEccCCChhHHHHHHHHHh
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI---------AP------IRGAVSLEQDITKPECRARVKKVME 105 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~---------~~------i~~V~~i~gDIt~~~~~~~l~~~L~ 105 (832)
..+.+|||||||+|+++..++.+.+ ...|++||+++. .. .+++.++++|+... +.
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~---------l~ 176 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHES-VEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEF---------LK 176 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTT-CCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHH---------HH
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHH---------HH
Confidence 3567999999999999999987644 579999999962 11 25688889987642 11
Q ss_pred hccCCcccEEEeCCCCCCCCCchhHHhHHhHHH-HHHHHHHHhhcccCcEEEEEEcCCC----CHHHHHHHHHHcccceE
Q 003302 106 EHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALV-IDSVKLATQFLAPKGTFVTKVFRSQ----DYSSVLYCLKQLFEKVE 180 (832)
Q Consensus 106 ~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~-~~aLk~A~~~LkpGG~fV~KVFrs~----d~~~ll~~L~~~F~~V~ 180 (832)
. ..+.||+|++|+... +... ..|. ...+..+.++|+|||.|++..-... .+..+...+...|..+.
T Consensus 177 ~-~~~~fD~Ii~d~~~~----~~~~----~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~vF~~v~ 247 (314)
T 2b2c_A 177 N-HKNEFDVIITDSSDP----VGPA----ESLFGQSYYELLRDALKEDGILSSQGESVWLHLPLIAHLVAFNRKIFPAVT 247 (314)
T ss_dssp H-CTTCEEEEEECCC---------------------HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCSEEE
T ss_pred h-cCCCceEEEEcCCCC----CCcc----hhhhHHHHHHHHHhhcCCCeEEEEECCCcccCHHHHHHHHHHHHHHCCcce
Confidence 1 126789999987411 1111 1111 4677889999999999998642221 13445566777898776
Q ss_pred EecC-CCCCCCCcceeEEEee
Q 003302 181 VDKP-AASRSASAEIYLLGIK 200 (832)
Q Consensus 181 ~~KP-~sSR~~SaEiyvVc~g 200 (832)
++.- ..+.+..--.|++|..
T Consensus 248 ~~~~~iP~~~~g~~g~~~ask 268 (314)
T 2b2c_A 248 YAQSIVSTYPSGSMGYLICAK 268 (314)
T ss_dssp EEEEECTTSGGGEEEEEEEES
T ss_pred EEEEEecCcCCCceEEEEEeC
Confidence 5421 2222211124777754
No 214
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.55 E-value=2.1e-07 Score=96.59 Aligned_cols=115 Identities=16% Similarity=0.114 Sum_probs=80.3
Q ss_pred CCCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----------CCCC-CceEEEccCCChhHHHHHHHHHh
Q 003302 38 SFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----------APIR-GAVSLEQDITKPECRARVKKVME 105 (832)
Q Consensus 38 ~fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----------~~i~-~V~~i~gDIt~~~~~~~l~~~L~ 105 (832)
.++++|.+|||+|||+|.++..|+...| .+.|+|||+++- ..+. +|.++++|+... +.
T Consensus 11 ~~v~~g~~VlDIGtGsG~l~i~la~~~~-~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~---------l~ 80 (225)
T 3kr9_A 11 SFVSQGAILLDVGSDHAYLPIELVERGQ-IKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAA---------FE 80 (225)
T ss_dssp TTSCTTEEEEEETCSTTHHHHHHHHTTS-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGG---------CC
T ss_pred HhCCCCCEEEEeCCCcHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhh---------cc
Confidence 4568899999999999999999998754 568999999972 1344 488999998652 11
Q ss_pred hccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHHHH-Hcccce
Q 003302 106 EHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLK-QLFEKV 179 (832)
Q Consensus 106 ~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~L~-~~F~~V 179 (832)
.. ..||+|+..|. || .++...|..+...|+|||+||+.-. .....+...|. .-|.-+
T Consensus 81 ~~--~~~D~IviaG~---Gg----------~~i~~Il~~~~~~L~~~~~lVlq~~--~~~~~vr~~L~~~Gf~i~ 138 (225)
T 3kr9_A 81 ET--DQVSVITIAGM---GG----------RLIARILEEGLGKLANVERLILQPN--NREDDLRIWLQDHGFQIV 138 (225)
T ss_dssp GG--GCCCEEEEEEE---CH----------HHHHHHHHHTGGGCTTCCEEEEEES--SCHHHHHHHHHHTTEEEE
T ss_pred cC--cCCCEEEEcCC---Ch----------HHHHHHHHHHHHHhCCCCEEEEECC--CCHHHHHHHHHHCCCEEE
Confidence 10 25899887542 22 2345567778899999999998544 34556654444 435443
No 215
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.55 E-value=6e-08 Score=99.82 Aligned_cols=98 Identities=14% Similarity=0.174 Sum_probs=70.4
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CC-CCceEEEccCCChhHHHHHHHHHhhc-
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PI-RGAVSLEQDITKPECRARVKKVMEEH- 107 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i-~~V~~i~gDIt~~~~~~~l~~~L~~~- 107 (832)
.++.+|||+|||+|.++..++..++.++.|+|||+++.. .+ .++.++++|+.+. +. .+...
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~-----l~-~l~~~~ 144 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALAT-----LE-QLTQGK 144 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH-----HH-HHHTSS
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH-----HH-HHHhcC
Confidence 357899999999999999999988767899999999721 22 3588889987542 11 12110
Q ss_pred cCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEE
Q 003302 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTK 158 (832)
Q Consensus 108 ~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~K 158 (832)
..+.||+|++|+.. .. ....+..+.++|+|||+|++.
T Consensus 145 ~~~~fD~V~~d~~~--------~~------~~~~l~~~~~~LkpgG~lv~~ 181 (232)
T 3cbg_A 145 PLPEFDLIFIDADK--------RN------YPRYYEIGLNLLRRGGLMVID 181 (232)
T ss_dssp SCCCEEEEEECSCG--------GG------HHHHHHHHHHTEEEEEEEEEE
T ss_pred CCCCcCEEEECCCH--------HH------HHHHHHHHHHHcCCCeEEEEe
Confidence 01568999998641 11 134567788999999999984
No 216
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.54 E-value=1.1e-07 Score=105.97 Aligned_cols=110 Identities=21% Similarity=0.171 Sum_probs=73.7
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----------CCC-C-CceEEEccCCChhHHHHHHHHHhhc
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----------API-R-GAVSLEQDITKPECRARVKKVMEEH 107 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----------~~i-~-~V~~i~gDIt~~~~~~~l~~~L~~~ 107 (832)
.++.+|||||||+|+|+..++... ...|+|||+++. +.+ . ++.++++|+.+.. .. +..
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g--~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~-----~~-~~~- 289 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG--CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLL-----RT-YRD- 289 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHH-----HH-HHH-
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHH-----HH-HHh-
Confidence 478899999999999999999862 459999999962 134 4 7889999987632 11 110
Q ss_pred cCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcC
Q 003302 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFR 161 (832)
Q Consensus 108 ~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFr 161 (832)
....||+|++|++....+.... ......+...+..+..+|+|||+|++....
T Consensus 290 ~~~~fD~Ii~dpP~~~~~~~~~--~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 290 RGEKFDVIVMDPPKFVENKSQL--MGACRGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp TTCCEEEEEECCSSTTTCSSSS--SCCCTHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cCCCCCEEEECCCCCCCChhHH--HHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 0157899999975321110000 000112345677889999999999986554
No 217
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.53 E-value=3e-07 Score=97.22 Aligned_cols=125 Identities=10% Similarity=0.029 Sum_probs=84.2
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC----C--C---------CCCceEEEccCCChhHHHHHHHHHh
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI----A--P---------IRGAVSLEQDITKPECRARVKKVME 105 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~----~--~---------i~~V~~i~gDIt~~~~~~~l~~~L~ 105 (832)
..+.+|||||||+|+++..++.+ + ..|++||+++. . . .+++.++.+|.....
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~--~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---------- 137 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D--THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---------- 137 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S--CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC----------
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C--CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH----------
Confidence 35679999999999999988877 4 69999999962 0 1 246788888876521
Q ss_pred hccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCC-C---HHHHHHHHHHcccceEE
Q 003302 106 EHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQ-D---YSSVLYCLKQLFEKVEV 181 (832)
Q Consensus 106 ~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~-d---~~~ll~~L~~~F~~V~~ 181 (832)
++||+|++|.+. +. ..+..+.++|+|||.|++....+. . +..+...+...|..+..
T Consensus 138 ----~~fD~Ii~d~~d-------p~---------~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~~~ 197 (262)
T 2cmg_A 138 ----KKYDLIFCLQEP-------DI---------HRIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGGVFSVAMP 197 (262)
T ss_dssp ----CCEEEEEESSCC-------CH---------HHHHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHHTTCSEEEE
T ss_pred ----hhCCEEEECCCC-------hH---------HHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHhCCceEE
Confidence 568999999531 11 145678999999999998653332 2 33445556777887766
Q ss_pred ecC-CCCCCCCcceeEEEee
Q 003302 182 DKP-AASRSASAEIYLLGIK 200 (832)
Q Consensus 182 ~KP-~sSR~~SaEiyvVc~g 200 (832)
+.. ..+ ..--.|++|..
T Consensus 198 ~~~~vP~--~g~~~~~~as~ 215 (262)
T 2cmg_A 198 FVAPLRI--LSNKGYIYASF 215 (262)
T ss_dssp ECCTTCT--TCCEEEEEEES
T ss_pred EEEccCC--CcccEEEEeeC
Confidence 432 222 22334666653
No 218
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.53 E-value=3.7e-07 Score=98.05 Aligned_cols=107 Identities=16% Similarity=0.188 Sum_probs=75.7
Q ss_pred hhhhhcCC-CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC----------CCC-CceEEEccCCChhHHHH
Q 003302 32 QLDSKFSF-LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA----------PIR-GAVSLEQDITKPECRAR 99 (832)
Q Consensus 32 qi~~kf~f-l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~----------~i~-~V~~i~gDIt~~~~~~~ 99 (832)
.+...+.+ +.++.+|||+|||+|.++..++...| +..|+|+|++.+. .+. +|.++++|+.+..
T Consensus 154 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---- 228 (335)
T 2r3s_A 154 LIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNP-NAEIFGVDWASVLEVAKENARIQGVASRYHTIAGSAFEVD---- 228 (335)
T ss_dssp HHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCT-TCEEEEEECHHHHHHHHHHHHHHTCGGGEEEEESCTTTSC----
T ss_pred HHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCC-CCeEEEEecHHHHHHHHHHHHhcCCCcceEEEecccccCC----
Confidence 34444553 36778999999999999999999886 5799999998421 122 5899999998742
Q ss_pred HHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEc
Q 003302 100 VKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVF 160 (832)
Q Consensus 100 l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVF 160 (832)
+. ..||+|++..... .|..+ .+..+|+.+.++|+|||++++..+
T Consensus 229 ----~~----~~~D~v~~~~~l~---~~~~~------~~~~~l~~~~~~L~pgG~l~i~e~ 272 (335)
T 2r3s_A 229 ----YG----NDYDLVLLPNFLH---HFDVA------TCEQLLRKIKTALAVEGKVIVFDF 272 (335)
T ss_dssp ----CC----SCEEEEEEESCGG---GSCHH------HHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ----CC----CCCcEEEEcchhc---cCCHH------HHHHHHHHHHHhCCCCcEEEEEee
Confidence 11 3489999964321 12111 234678889999999999887544
No 219
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.53 E-value=1.6e-07 Score=95.51 Aligned_cols=90 Identities=16% Similarity=0.104 Sum_probs=66.8
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC---------CCCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA---------PIRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~---------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
+.++.+|||+|||+|.++..++... +.|+|||+++-. ...++.++++|+..... .. +
T Consensus 68 ~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~--------~~---~ 133 (231)
T 1vbf_A 68 LHKGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYE--------EE---K 133 (231)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCG--------GG---C
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccc--------cC---C
Confidence 4678899999999999999999874 699999999621 11278899999875210 11 6
Q ss_pred cccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEc
Q 003302 111 AFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVF 160 (832)
Q Consensus 111 ~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVF 160 (832)
.||+|++++... +.. ..+.++|+|||+|++.+.
T Consensus 134 ~fD~v~~~~~~~----~~~-------------~~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 134 PYDRVVVWATAP----TLL-------------CKPYEQLKEGGIMILPIG 166 (231)
T ss_dssp CEEEEEESSBBS----SCC-------------HHHHHTEEEEEEEEEEEC
T ss_pred CccEEEECCcHH----HHH-------------HHHHHHcCCCcEEEEEEc
Confidence 789999986432 111 136789999999998653
No 220
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.52 E-value=5.1e-08 Score=99.42 Aligned_cols=94 Identities=13% Similarity=0.111 Sum_probs=70.3
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCC-----CCEEEEEeCCCCC-----------C-----CCCceEEEccCCChhHHH
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPV-----GSLVLGLDLVPIA-----------P-----IRGAVSLEQDITKPECRA 98 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~-----~~~ViGVDLsp~~-----------~-----i~~V~~i~gDIt~~~~~~ 98 (832)
+.++.+|||+|||+|.++..++..++. .+.|+|||+++.. . .+++.++++|+....
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~--- 158 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGY--- 158 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCC---
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCC---
Confidence 578899999999999999999987642 3599999999721 1 457899999987521
Q ss_pred HHHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcC
Q 003302 99 RVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFR 161 (832)
Q Consensus 99 ~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFr 161 (832)
.. .+.||+|+++++.. +. +..+.++|+|||+|++.+..
T Consensus 159 ------~~--~~~fD~I~~~~~~~----~~-------------~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 159 ------PP--NAPYNAIHVGAAAP----DT-------------PTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp ------GG--GCSEEEEEECSCBS----SC-------------CHHHHHTEEEEEEEEEEESC
T ss_pred ------Cc--CCCccEEEECCchH----HH-------------HHHHHHHhcCCCEEEEEEec
Confidence 11 15789999987532 11 13567899999999997754
No 221
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.50 E-value=1.1e-07 Score=105.70 Aligned_cols=93 Identities=16% Similarity=0.193 Sum_probs=65.7
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC----------CCC-CceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA----------PIR-GAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~----------~i~-~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
+|.+|||||||+|.++..+++. + ..+|+|||.++|. .+. .|+++++|+++.. ++ .
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~a-G-A~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~--------lp----e 148 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQA-G-ARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVE--------LP----E 148 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCC--------CS----S
T ss_pred CCCEEEEeCCCccHHHHHHHHh-C-CCEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeec--------CC----c
Confidence 5889999999999999887765 2 3589999999863 233 4889999998753 11 6
Q ss_pred cccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEE
Q 003302 111 AFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFV 156 (832)
Q Consensus 111 ~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV 156 (832)
.||+|+|...- ....+. .++..++....++|+|||.++
T Consensus 149 ~~DvivsE~~~-~~l~~e-------~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 149 QVDAIVSEWMG-YGLLHE-------SMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp CEEEEECCCCB-TTBTTT-------CSHHHHHHHHHHHEEEEEEEE
T ss_pred cccEEEeeccc-cccccc-------chhhhHHHHHHhhCCCCceEC
Confidence 78999997431 111111 012344555678999999987
No 222
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.50 E-value=1.3e-07 Score=103.56 Aligned_cols=95 Identities=16% Similarity=0.253 Sum_probs=69.4
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC----------CC-CCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA----------PI-RGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~----------~i-~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
.++.+|||||||+|.++..++.. + ...|+|||++++. .+ .+|.++++|+.+.. + .
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~--------~----~ 114 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQA-G-ARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVS--------L----P 114 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCC--------C----S
T ss_pred CCcCEEEEcCCCccHHHHHHHhC-C-CCEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCC--------C----C
Confidence 46889999999999999998875 3 4699999999742 23 46899999998742 1 1
Q ss_pred CcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEE
Q 003302 110 RAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTK 158 (832)
Q Consensus 110 ~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~K 158 (832)
+.||+|++++... ++..+. ....+..+.++|+|||.|++.
T Consensus 115 ~~~D~Ivs~~~~~---~~~~~~------~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 115 EQVDIIISEPMGY---MLFNER------MLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp SCEEEEEECCCBT---TBTTTS------HHHHHHHGGGGEEEEEEEESC
T ss_pred CceeEEEEeCchh---cCChHH------HHHHHHHHHhhcCCCeEEEEe
Confidence 5689999986421 222111 134455678999999999853
No 223
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.50 E-value=3.4e-07 Score=91.22 Aligned_cols=105 Identities=10% Similarity=-0.018 Sum_probs=67.9
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC------CCCCceEEEccCCChhHHHHHHHHHhhccCCcccE
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA------PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDl 114 (832)
.++.+|||||||+|.++..++.. + ...|+|||+++.. ..+++.++++|+.+.+ +.||+
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~~--------------~~~D~ 113 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLL-G-AESVTAFDIDPDAIETAKRNCGGVNFMVADVSEIS--------------GKYDT 113 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHT-T-BSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGCC--------------CCEEE
T ss_pred CCCCEEEEEeCCccHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHhcCCCEEEECcHHHCC--------------CCeeE
Confidence 46789999999999999999876 3 4589999999721 2337999999987631 57899
Q ss_pred EEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHHHHH
Q 003302 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQ 174 (832)
Q Consensus 115 VlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~L~~ 174 (832)
|++|++.... ... .....+..+.++| ||.+++ +.+.....+...+..
T Consensus 114 v~~~~p~~~~----~~~-----~~~~~l~~~~~~~--g~~~~~--~~~~~~~~~~~~~~~ 160 (200)
T 1ne2_A 114 WIMNPPFGSV----VKH-----SDRAFIDKAFETS--MWIYSI--GNAKARDFLRREFSA 160 (200)
T ss_dssp EEECCCC----------------CHHHHHHHHHHE--EEEEEE--EEGGGHHHHHHHHHH
T ss_pred EEECCCchhc----cCc-----hhHHHHHHHHHhc--CcEEEE--EcCchHHHHHHHHHH
Confidence 9999864321 111 1124566677777 554443 333334444444444
No 224
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.48 E-value=9.3e-08 Score=96.80 Aligned_cols=92 Identities=14% Similarity=0.211 Sum_probs=66.3
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-C---CCCCceEEEccCCChhHHHHHHHHHhhccCCcccEEEe
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-A---PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-~---~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVls 117 (832)
++.+|||||||+|.++..++.. +|+|+++. . ...++.++++|+.+.. +. .+.||+|++
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~~~~~~~~d~~~~~--------~~---~~~fD~v~~ 108 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKRGVFVLKGTAENLP--------LK---DESFDFALM 108 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHTTCEEEECBTTBCC--------SC---TTCEEEEEE
T ss_pred CCCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhcCCEEEEcccccCC--------CC---CCCeeEEEE
Confidence 3789999999999998877542 99999972 1 1127889999987643 11 257899999
Q ss_pred CCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCC
Q 003302 118 DGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRS 162 (832)
Q Consensus 118 Dgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs 162 (832)
..... +..+ ...+|..+.++|+|||+|++.++..
T Consensus 109 ~~~l~----~~~~-------~~~~l~~~~~~L~pgG~l~i~~~~~ 142 (219)
T 1vlm_A 109 VTTIC----FVDD-------PERALKEAYRILKKGGYLIVGIVDR 142 (219)
T ss_dssp ESCGG----GSSC-------HHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred cchHh----hccC-------HHHHHHHHHHHcCCCcEEEEEEeCC
Confidence 75421 1111 2356778899999999999976544
No 225
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.47 E-value=3e-07 Score=99.85 Aligned_cols=108 Identities=15% Similarity=0.226 Sum_probs=76.8
Q ss_pred hhhhhcCCCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC----------CC-CCceEEEccCCChhHHHHH
Q 003302 32 QLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA----------PI-RGAVSLEQDITKPECRARV 100 (832)
Q Consensus 32 qi~~kf~fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~----------~i-~~V~~i~gDIt~~~~~~~l 100 (832)
.+...+.+...+.+|||+|||+|.++..++...| +..++++|+..+. .+ .+|.++.+|+.+...
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---- 243 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHP-QLTGQIWDLPTTRDAARKTIHAHDLGGRVEFFEKNLLDARN---- 243 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCT-TCEEEEEECGGGHHHHHHHHHHTTCGGGEEEEECCTTCGGG----
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCC-CCeEEEEECHHHHHHHHHHHHhcCCCCceEEEeCCcccCcc----
Confidence 4445555433378999999999999999999887 5799999994331 22 358999999987531
Q ss_pred HHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEE
Q 003302 101 KKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKV 159 (832)
Q Consensus 101 ~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KV 159 (832)
+ ....||+|++..... .|..+ .+..+|+.+.++|+|||+|++..
T Consensus 244 ---~---~~~~~D~v~~~~vlh---~~~~~------~~~~~l~~~~~~L~pgG~l~i~e 287 (352)
T 3mcz_A 244 ---F---EGGAADVVMLNDCLH---YFDAR------EAREVIGHAAGLVKPGGALLILT 287 (352)
T ss_dssp ---G---TTCCEEEEEEESCGG---GSCHH------HHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ---c---CCCCccEEEEecccc---cCCHH------HHHHHHHHHHHHcCCCCEEEEEE
Confidence 0 115689999965321 22221 13567889999999999998854
No 226
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.47 E-value=1.2e-06 Score=96.62 Aligned_cols=104 Identities=14% Similarity=0.270 Sum_probs=75.1
Q ss_pred hhhhcCCCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC----CCCCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 33 LDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI----APIRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 33 i~~kf~fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~----~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
+...|.-+.++.+|||+|||+|.++..++...| +..++++|+..+ ...++|.++.+|+.++ ++
T Consensus 194 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~---------~p--- 260 (368)
T 3reo_A 194 ILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYP-SINAINFDLPHVIQDAPAFSGVEHLGGDMFDG---------VP--- 260 (368)
T ss_dssp HHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEECHHHHTTCCCCTTEEEEECCTTTC---------CC---
T ss_pred HHHhcccccCCCEEEEeCCCcCHHHHHHHHhCC-CCEEEEEehHHHHHhhhhcCCCEEEecCCCCC---------CC---
Confidence 344454356778999999999999999999986 678999999332 2346899999999862 11
Q ss_pred CCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEc
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVF 160 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVF 160 (832)
.. |+|++.... -.|..+ .+..+|+.+.++|+|||+|++.-+
T Consensus 261 -~~-D~v~~~~vl---h~~~~~------~~~~~l~~~~~~L~pgG~l~i~e~ 301 (368)
T 3reo_A 261 -KG-DAIFIKWIC---HDWSDE------HCLKLLKNCYAALPDHGKVIVAEY 301 (368)
T ss_dssp -CC-SEEEEESCG---GGBCHH------HHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred -CC-CEEEEechh---hcCCHH------HHHHHHHHHHHHcCCCCEEEEEEe
Confidence 12 999986431 123222 234678899999999999988543
No 227
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.46 E-value=3.9e-07 Score=103.05 Aligned_cols=98 Identities=11% Similarity=0.097 Sum_probs=68.7
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC------------C------C--CCCceEEEccCC-ChhHHH
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI------------A------P--IRGAVSLEQDIT-KPECRA 98 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~------------~------~--i~~V~~i~gDIt-~~~~~~ 98 (832)
+.++.+|||||||+|.++..++...+ ...|+|||+++. . . +.+|.++++|.. .....
T Consensus 240 l~~g~~VLDLGCGsG~la~~LA~~~g-~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~- 317 (433)
T 1u2z_A 240 LKKGDTFMDLGSGVGNCVVQAALECG-CALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRV- 317 (433)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHH-
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcccccccc-
Confidence 46789999999999999999998765 458999999962 1 2 357888887544 32110
Q ss_pred HHHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEE
Q 003302 99 RVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTK 158 (832)
Q Consensus 99 ~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~K 158 (832)
.. .. +.||+|+++... +..+ ...+|..+.++|+|||.||+.
T Consensus 318 --~~--~~---~~FDvIvvn~~l-----~~~d-------~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 318 --AE--LI---PQCDVILVNNFL-----FDED-------LNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp --HH--HG---GGCSEEEECCTT-----CCHH-------HHHHHHHHHTTCCTTCEEEES
T ss_pred --cc--cc---CCCCEEEEeCcc-----cccc-------HHHHHHHHHHhCCCCeEEEEe
Confidence 00 01 568999987432 1111 234567888999999999983
No 228
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.45 E-value=1.3e-07 Score=96.97 Aligned_cols=92 Identities=14% Similarity=0.181 Sum_probs=67.5
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----------CCCCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----------APIRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----------~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
+.++.+|||+|||+|.++..++...+ +.|+|||+++. ..+.++.++++|+... +..
T Consensus 89 ~~~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~---------~~~-- 155 (235)
T 1jg1_A 89 LKPGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKG---------FPP-- 155 (235)
T ss_dssp CCTTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC---------CGG--
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccC---------CCC--
Confidence 46788999999999999999999875 68999999962 1345788999997321 111
Q ss_pred CCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcC
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFR 161 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFr 161 (832)
...||+|++++.+. +.. ..+.++|+|||+|++.+..
T Consensus 156 ~~~fD~Ii~~~~~~----~~~-------------~~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 156 KAPYDVIIVTAGAP----KIP-------------EPLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp GCCEEEEEECSBBS----SCC-------------HHHHHTEEEEEEEEEEECS
T ss_pred CCCccEEEECCcHH----HHH-------------HHHHHhcCCCcEEEEEEec
Confidence 14589999986431 111 1457899999999996643
No 229
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.44 E-value=2.3e-07 Score=100.82 Aligned_cols=95 Identities=14% Similarity=0.201 Sum_probs=67.8
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC----------CC-CCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA----------PI-RGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~----------~i-~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
.++.+|||||||+|.++..+++. + ...|+|||++++. .+ .+|.++++|+.+.. +. .
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~-g-~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--------~~---~ 103 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKH-G-AKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVH--------LP---F 103 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHT-C-CSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSC--------CS---S
T ss_pred cCCCEEEEecCccHHHHHHHHHC-C-CCEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhcc--------CC---C
Confidence 36789999999999999998876 3 4599999999742 22 35889999998743 11 2
Q ss_pred CcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEE
Q 003302 110 RAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFV 156 (832)
Q Consensus 110 ~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV 156 (832)
+.||+|+++..... ..+.. .+..++..+.++|+|||.|+
T Consensus 104 ~~~D~Ivs~~~~~~-l~~~~-------~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 104 PKVDIIISEWMGYF-LLYES-------MMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp SCEEEEEECCCBTT-BSTTC-------CHHHHHHHHHHHEEEEEEEE
T ss_pred CcccEEEEeCchhh-cccHH-------HHHHHHHHHHhhcCCCeEEE
Confidence 57899999853111 11111 12345667789999999997
No 230
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.44 E-value=4.5e-07 Score=94.38 Aligned_cols=117 Identities=15% Similarity=0.085 Sum_probs=81.1
Q ss_pred cCCCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----------CCCC-CceEEEccCCChhHHHHHHHHH
Q 003302 37 FSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----------APIR-GAVSLEQDITKPECRARVKKVM 104 (832)
Q Consensus 37 f~fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----------~~i~-~V~~i~gDIt~~~~~~~l~~~L 104 (832)
..++++|.+|||+|||+|.++..|+...+ .+.|+|+|+++- ..+. +|.++++|+.+..
T Consensus 16 ~~~v~~g~~VlDIGtGsG~l~i~la~~~~-~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~--------- 85 (230)
T 3lec_A 16 ANYVPKGARLLDVGSDHAYLPIFLLQMGY-CDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAF--------- 85 (230)
T ss_dssp HTTSCTTEEEEEETCSTTHHHHHHHHTTC-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGC---------
T ss_pred HHhCCCCCEEEEECCchHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcc---------
Confidence 34678899999999999999999998754 568999999972 1333 4899999987642
Q ss_pred hhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHH-HHHHHcccceE
Q 003302 105 EEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVL-YCLKQLFEKVE 180 (832)
Q Consensus 105 ~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll-~~L~~~F~~V~ 180 (832)
.. ...||+|+.-| +|| .++...|..+...|+++|+||+.-.. ....+. |+...-|.-+.
T Consensus 86 ~~--~~~~D~IviaG---mGg----------~lI~~IL~~~~~~l~~~~~lIlqp~~--~~~~lr~~L~~~Gf~i~~ 145 (230)
T 3lec_A 86 EE--ADNIDTITICG---MGG----------RLIADILNNDIDKLQHVKTLVLQPNN--REDDLRKWLAANDFEIVA 145 (230)
T ss_dssp CG--GGCCCEEEEEE---ECH----------HHHHHHHHHTGGGGTTCCEEEEEESS--CHHHHHHHHHHTTEEEEE
T ss_pred cc--ccccCEEEEeC---Cch----------HHHHHHHHHHHHHhCcCCEEEEECCC--ChHHHHHHHHHCCCEEEE
Confidence 11 02589987643 222 23455667778899999999986543 345554 44444465443
No 231
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.43 E-value=3.9e-07 Score=95.62 Aligned_cols=115 Identities=13% Similarity=0.105 Sum_probs=80.2
Q ss_pred cCCCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----------CCCC-CceEEEccCCChhHHHHHHHHH
Q 003302 37 FSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----------APIR-GAVSLEQDITKPECRARVKKVM 104 (832)
Q Consensus 37 f~fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----------~~i~-~V~~i~gDIt~~~~~~~l~~~L 104 (832)
..++.+|.+|||+|||+|.++..|+...+ .+.|+|+|+++- ..+. .|.++++|+....
T Consensus 16 ~~~v~~g~~VlDIGtGsG~l~i~la~~~~-~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~--------- 85 (244)
T 3gnl_A 16 ASYITKNERIADIGSDHAYLPCFAVKNQT-ASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVI--------- 85 (244)
T ss_dssp HTTCCSSEEEEEETCSTTHHHHHHHHTTS-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGC---------
T ss_pred HHhCCCCCEEEEECCccHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhcc---------
Confidence 34678899999999999999999998754 568999999972 1343 4889999987632
Q ss_pred hhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHH-HHHHHcccc
Q 003302 105 EEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVL-YCLKQLFEK 178 (832)
Q Consensus 105 ~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll-~~L~~~F~~ 178 (832)
... ..||+|+.-| +|| .++...|..+...|+++|+||+.-.. ....+. |+...-|.-
T Consensus 86 ~~~--~~~D~Iviag---mGg----------~lI~~IL~~~~~~L~~~~~lIlq~~~--~~~~lr~~L~~~Gf~i 143 (244)
T 3gnl_A 86 EKK--DAIDTIVIAG---MGG----------TLIRTILEEGAAKLAGVTKLILQPNI--AAWQLREWSEQNNWLI 143 (244)
T ss_dssp CGG--GCCCEEEEEE---ECH----------HHHHHHHHHTGGGGTTCCEEEEEESS--CHHHHHHHHHHHTEEE
T ss_pred Ccc--ccccEEEEeC---Cch----------HHHHHHHHHHHHHhCCCCEEEEEcCC--ChHHHHHHHHHCCCEE
Confidence 110 2489988643 222 23456677788999999999985432 445555 444444653
No 232
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.43 E-value=1.3e-06 Score=95.48 Aligned_cols=97 Identities=22% Similarity=0.253 Sum_probs=71.6
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCC-CC----------CC-CCceEEEccCCChhHHHHHHHHHhhc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVP-IA----------PI-RGAVSLEQDITKPECRARVKKVMEEH 107 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp-~~----------~i-~~V~~i~gDIt~~~~~~~l~~~L~~~ 107 (832)
+.++.+|||+|||+|.++..++...| +..++|+|+ + +. .+ .+|.++++|+.+. +.
T Consensus 180 ~~~~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---------~~-- 246 (374)
T 1qzz_A 180 WSAVRHVLDVGGGNGGMLAAIALRAP-HLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKP---------LP-- 246 (374)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSC---------CS--
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHCC-CCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCc---------CC--
Confidence 35678999999999999999999886 679999999 6 21 23 3699999999762 11
Q ss_pred cCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEc
Q 003302 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVF 160 (832)
Q Consensus 108 ~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVF 160 (832)
..||+|++..... .|... .+..+|+.+.++|+|||+|++..+
T Consensus 247 --~~~D~v~~~~vl~---~~~~~------~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 247 --VTADVVLLSFVLL---NWSDE------DALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp --CCEEEEEEESCGG---GSCHH------HHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred --CCCCEEEEecccc---CCCHH------HHHHHHHHHHHhcCCCcEEEEEec
Confidence 2389999975321 12211 124678889999999999988555
No 233
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.42 E-value=2.6e-08 Score=111.36 Aligned_cols=153 Identities=11% Similarity=0.011 Sum_probs=97.0
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----------CCCCC--ceEEEccCCChhHHHHHHHHHh-h
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----------APIRG--AVSLEQDITKPECRARVKKVME-E 106 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----------~~i~~--V~~i~gDIt~~~~~~~l~~~L~-~ 106 (832)
.+|.+|||||||+|+++..++..++....|++||+++. +.+.+ +.++++|+... +. .
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~---------l~~~ 121 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFF---------LRKE 121 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHH---------HHSC
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHH---------HHHh
Confidence 36789999999999999999987643368999999962 23444 88888887542 21 1
Q ss_pred ccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCH--HHHHHHHHHcccceEEecC
Q 003302 107 HGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDY--SSVLYCLKQLFEKVEVDKP 184 (832)
Q Consensus 107 ~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~--~~ll~~L~~~F~~V~~~KP 184 (832)
. ...||+|++|+ + +.. ...+..|..+|+|||+|++...+.... ......++.|-..+..++.
T Consensus 122 ~-~~~fD~V~lDP-~--g~~------------~~~l~~a~~~Lk~gGll~~t~t~~~~l~g~~~~~~~rkYg~~p~r~~~ 185 (392)
T 3axs_A 122 W-GFGFDYVDLDP-F--GTP------------VPFIESVALSMKRGGILSLTATDTAPLSGTYPKTCMRRYMARPLRNEF 185 (392)
T ss_dssp C-SSCEEEEEECC-S--SCC------------HHHHHHHHHHEEEEEEEEEEECCHHHHTTSSHHHHHHHHSSBCCCSTT
T ss_pred h-CCCCcEEEECC-C--cCH------------HHHHHHHHHHhCCCCEEEEEecchhhhccccHHHHHHHhCCccccccc
Confidence 1 25789999997 2 110 124556788899999888754221100 1334556665444332221
Q ss_pred CCCCCCCcceeEEEeeccCCCCCCCCccchhhhcccC
Q 003302 185 AASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGS 221 (832)
Q Consensus 185 ~sSR~~SaEiyvVc~gfk~p~~id~~~ldp~~vf~~~ 221 (832)
.+ +.+-+.++....+...+.+..+.+|++++...
T Consensus 186 ~~---e~~~r~~L~~~~~~a~~~~~~i~P~l~~~~~~ 219 (392)
T 3axs_A 186 KH---EVGIRILIKKVIELAAQYDIAMIPIFAYSHLH 219 (392)
T ss_dssp HH---HHHHHHHHHHHHHHHHTTTEEEEEEEEEEETT
T ss_pred cc---chhHHHHHHHHHHhcccCCCeEEeeEEEEeCc
Confidence 11 33445566666663344578888888777553
No 234
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.42 E-value=4.6e-07 Score=96.65 Aligned_cols=107 Identities=14% Similarity=0.114 Sum_probs=69.5
Q ss_pred CCEEEEEcCCc---CHHHHHHHHhCCCCCEEEEEeCCCC-C--------C--CCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 43 SHAVLDLCAAP---GGWMQVAVQRVPVGSLVLGLDLVPI-A--------P--IRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 43 g~~VLDLGcGP---Gg~sq~La~~~p~~~~ViGVDLsp~-~--------~--i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
...|||||||+ |...+++....| .+.|+|||.+|. . . ..++.++++|++++... +......
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P-~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~--l~~~~~~-- 153 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAP-ESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASI--LDAPELR-- 153 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCT-TCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHH--HTCHHHH--
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCC-CCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhh--hcccccc--
Confidence 36899999996 444555555555 789999999982 1 1 12489999999996421 0000001
Q ss_pred CCccc-----EEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCC
Q 003302 109 VRAFD-----LVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQ 163 (832)
Q Consensus 109 ~~~FD-----lVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~ 163 (832)
+.|| .|++++. .+|..++.. ...+|..+.+.|+|||+|++..+...
T Consensus 154 -~~~D~~~p~av~~~av----LH~l~d~~~----p~~~l~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 154 -DTLDLTRPVALTVIAI----VHFVLDEDD----AVGIVRRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp -TTCCTTSCCEEEEESC----GGGSCGGGC----HHHHHHHHHTTSCTTCEEEEEEECCT
T ss_pred -cccCcCCcchHHhhhh----HhcCCchhh----HHHHHHHHHHhCCCCcEEEEEeccCC
Confidence 2344 5777654 346555422 13567788999999999999877654
No 235
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.41 E-value=7.9e-07 Score=96.98 Aligned_cols=96 Identities=13% Similarity=0.215 Sum_probs=72.0
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCC-C----CCCCCceEEEccCCChhHHHHHHHHHhhccCCcccE
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVP-I----APIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp-~----~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDl 114 (832)
+.++.+|||+|||+|.++..++...| +..|+|+|+ + + ...++|.++++|+.+. + ..||+
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~~---------~-----p~~D~ 249 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFP-KLKCIVFDR-PQVVENLSGSNNLTYVGGDMFTS---------I-----PNADA 249 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCCBTTEEEEECCTTTC---------C-----CCCSE
T ss_pred cccCceEEEeCCCccHHHHHHHHHCC-CCeEEEeeC-HHHHhhcccCCCcEEEeccccCC---------C-----CCccE
Confidence 45678999999999999999999886 569999999 5 2 2346799999999752 1 23799
Q ss_pred EEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhccc---CcEEEEEEc
Q 003302 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAP---KGTFVTKVF 160 (832)
Q Consensus 115 VlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~Lkp---GG~fV~KVF 160 (832)
|++..... +|. +. .+..+|+.+.++|+| ||+|++..+
T Consensus 250 v~~~~~lh---~~~-d~-----~~~~~l~~~~~~L~p~~~gG~l~i~e~ 289 (352)
T 1fp2_A 250 VLLKYILH---NWT-DK-----DCLRILKKCKEAVTNDGKRGKVTIIDM 289 (352)
T ss_dssp EEEESCGG---GSC-HH-----HHHHHHHHHHHHHSGGGCCCEEEEEEC
T ss_pred EEeehhhc---cCC-HH-----HHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 99875321 222 21 134678899999999 999988543
No 236
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.41 E-value=9.7e-07 Score=97.52 Aligned_cols=97 Identities=12% Similarity=0.009 Sum_probs=69.8
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCC-CC----------CCCCceEEEccCCC-hhHHHHHHHHHhhcc
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVP-IA----------PIRGAVSLEQDITK-PECRARVKKVMEEHG 108 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp-~~----------~i~~V~~i~gDIt~-~~~~~~l~~~L~~~~ 108 (832)
.++.+||||| |+|.++..++...+ .+.|+|||+++ +. .+.+|.++++|+.. ++ ...
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~-~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~----------~~~ 238 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGL-PKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLP----------DYA 238 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTC-CSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCC----------TTT
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhch----------hhc
Confidence 3578999999 99999999987743 46999999996 21 23479999999987 22 000
Q ss_pred CCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEE-EEEEcC
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTF-VTKVFR 161 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~f-V~KVFr 161 (832)
.+.||+|++|++.. .+ . ...++..+.++|+|||.+ ++.+..
T Consensus 239 ~~~fD~Vi~~~p~~---~~--------~-~~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 239 LHKFDTFITDPPET---LE--------A-IRAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp SSCBSEEEECCCSS---HH--------H-HHHHHHHHHHTBCSTTCEEEEEECT
T ss_pred cCCccEEEECCCCc---hH--------H-HHHHHHHHHHHcccCCeEEEEEEec
Confidence 15789999997422 11 1 256778899999999954 554544
No 237
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.41 E-value=4.8e-07 Score=98.66 Aligned_cols=103 Identities=15% Similarity=0.192 Sum_probs=74.1
Q ss_pred hhhhcCCCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC--------C-CCCceEEEccCCChhHHHHHHHH
Q 003302 33 LDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA--------P-IRGAVSLEQDITKPECRARVKKV 103 (832)
Q Consensus 33 i~~kf~fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~--------~-i~~V~~i~gDIt~~~~~~~l~~~ 103 (832)
+...|. +.++.+|||+|||+|.++..++...| +..++++|+.++. . .++|.++++|+.++.
T Consensus 176 ~~~~~~-~~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~-------- 245 (348)
T 3lst_A 176 LARAGD-FPATGTVADVGGGRGGFLLTVLREHP-GLQGVLLDRAEVVARHRLDAPDVAGRWKVVEGDFLREV-------- 245 (348)
T ss_dssp HHHHSC-CCSSEEEEEETCTTSHHHHHHHHHCT-TEEEEEEECHHHHTTCCCCCGGGTTSEEEEECCTTTCC--------
T ss_pred HHHhCC-ccCCceEEEECCccCHHHHHHHHHCC-CCEEEEecCHHHhhcccccccCCCCCeEEEecCCCCCC--------
Confidence 334444 46678999999999999999999887 6789999996421 1 135899999997421
Q ss_pred HhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEc
Q 003302 104 MEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVF 160 (832)
Q Consensus 104 L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVF 160 (832)
..||+|++..... .|... .+..+|+.+.++|+|||+|++..+
T Consensus 246 ------p~~D~v~~~~vlh---~~~d~------~~~~~L~~~~~~LkpgG~l~i~e~ 287 (348)
T 3lst_A 246 ------PHADVHVLKRILH---NWGDE------DSVRILTNCRRVMPAHGRVLVIDA 287 (348)
T ss_dssp ------CCCSEEEEESCGG---GSCHH------HHHHHHHHHHHTCCTTCEEEEEEC
T ss_pred ------CCCcEEEEehhcc---CCCHH------HHHHHHHHHHHhcCCCCEEEEEEe
Confidence 2679999875321 12221 134678899999999999988543
No 238
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.40 E-value=1.8e-06 Score=94.99 Aligned_cols=103 Identities=16% Similarity=0.193 Sum_probs=74.9
Q ss_pred hhhhcCCCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC----CCCCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 33 LDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI----APIRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 33 i~~kf~fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~----~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
+...|.-+.++.+|||+|||+|.++..++...| +..++++|+..+ ...++|.++.+|+.++ ++ .
T Consensus 192 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~~~~v~~~~~D~~~~---------~p--~ 259 (364)
T 3p9c_A 192 LLELYHGFEGLGTLVDVGGGVGATVAAIAAHYP-TIKGVNFDLPHVISEAPQFPGVTHVGGDMFKE---------VP--S 259 (364)
T ss_dssp HHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEECHHHHTTCCCCTTEEEEECCTTTC---------CC--C
T ss_pred HHHhcccccCCCEEEEeCCCCCHHHHHHHHHCC-CCeEEEecCHHHHHhhhhcCCeEEEeCCcCCC---------CC--C
Confidence 444454356778999999999999999999887 678999999432 2346899999999862 11 1
Q ss_pred CCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEE
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKV 159 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KV 159 (832)
+ |+|++.... -.|..+ -+..+|+.+.++|+|||+|++.-
T Consensus 260 -~--D~v~~~~vl---h~~~d~------~~~~~L~~~~~~L~pgG~l~i~e 298 (364)
T 3p9c_A 260 -G--DTILMKWIL---HDWSDQ------HCATLLKNCYDALPAHGKVVLVQ 298 (364)
T ss_dssp -C--SEEEEESCG---GGSCHH------HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred -C--CEEEehHHh---ccCCHH------HHHHHHHHHHHHcCCCCEEEEEE
Confidence 2 999986431 123222 23567889999999999998853
No 239
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.40 E-value=1.4e-06 Score=95.09 Aligned_cols=101 Identities=17% Similarity=0.119 Sum_probs=73.5
Q ss_pred hhcCCCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCC-CC----------CCC-CceEEEccCCChhHHHHHHH
Q 003302 35 SKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVP-IA----------PIR-GAVSLEQDITKPECRARVKK 102 (832)
Q Consensus 35 ~kf~fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp-~~----------~i~-~V~~i~gDIt~~~~~~~l~~ 102 (832)
..+. +.++.+|||+|||+|.++..++...| +..|+|+|+ + +. .++ +|.++++|+.+..
T Consensus 184 ~~~~-~~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------- 253 (359)
T 1x19_A 184 EEAK-LDGVKKMIDVGGGIGDISAAMLKHFP-ELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKES------- 253 (359)
T ss_dssp HHCC-CTTCCEEEEESCTTCHHHHHHHHHCT-TCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSC-------
T ss_pred HhcC-CCCCCEEEEECCcccHHHHHHHHHCC-CCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCC-------
Confidence 3444 46778999999999999999999976 679999999 6 31 234 4999999998742
Q ss_pred HHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEc
Q 003302 103 VMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVF 160 (832)
Q Consensus 103 ~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVF 160 (832)
...+|+|++..... .|.. ..+..+|+.+.++|+|||+|++..+
T Consensus 254 ------~~~~D~v~~~~vlh---~~~d------~~~~~~l~~~~~~L~pgG~l~i~e~ 296 (359)
T 1x19_A 254 ------YPEADAVLFCRILY---SANE------QLSTIMCKKAFDAMRSGGRLLILDM 296 (359)
T ss_dssp ------CCCCSEEEEESCGG---GSCH------HHHHHHHHHHHTTCCTTCEEEEEEE
T ss_pred ------CCCCCEEEEechhc---cCCH------HHHHHHHHHHHHhcCCCCEEEEEec
Confidence 12349999864321 1221 1235678899999999999977543
No 240
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.36 E-value=4e-07 Score=109.07 Aligned_cols=97 Identities=12% Similarity=0.205 Sum_probs=71.6
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-C----------------CCCCceEEEccCCChhHHHHHHHHH
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-A----------------PIRGAVSLEQDITKPECRARVKKVM 104 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-~----------------~i~~V~~i~gDIt~~~~~~~l~~~L 104 (832)
++.+|||||||+|.++..|+...++...|+|||+++. . .++++.++++|+++...
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~-------- 792 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDS-------- 792 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCT--------
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCc--------
Confidence 6889999999999999999988654579999999962 1 23579999999988542
Q ss_pred hhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEE
Q 003302 105 EEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKV 159 (832)
Q Consensus 105 ~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KV 159 (832)
. .+.||+|++.... .|..+. ....++..+.++|+|| +|++.+
T Consensus 793 ~---d~sFDlVV~~eVL----eHL~dp-----~l~~~L~eI~RvLKPG-~LIIST 834 (950)
T 3htx_A 793 R---LHDVDIGTCLEVI----EHMEED-----QACEFGEKVLSLFHPK-LLIVST 834 (950)
T ss_dssp T---SCSCCEEEEESCG----GGSCHH-----HHHHHHHHHHHTTCCS-EEEEEE
T ss_pred c---cCCeeEEEEeCch----hhCChH-----HHHHHHHHHHHHcCCC-EEEEEe
Confidence 1 2678999997542 122221 1235677899999999 666644
No 241
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.36 E-value=2.2e-06 Score=92.42 Aligned_cols=101 Identities=15% Similarity=0.115 Sum_probs=73.2
Q ss_pred hhhcCCCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCC-CCC-----------CCCceEEEccCCChhHHHHHH
Q 003302 34 DSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVP-IAP-----------IRGAVSLEQDITKPECRARVK 101 (832)
Q Consensus 34 ~~kf~fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp-~~~-----------i~~V~~i~gDIt~~~~~~~l~ 101 (832)
...+.+ .+ .+|||+|||+|.++..++...| +..|+|+|+ + +.. ..+|.++++|+.++.
T Consensus 161 ~~~~~~-~~-~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------ 230 (334)
T 2ip2_A 161 PRLLDF-RG-RSFVDVGGGSGELTKAILQAEP-SARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQEV------ 230 (334)
T ss_dssp HHHSCC-TT-CEEEEETCTTCHHHHHHHHHCT-TCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTCC------
T ss_pred HHhCCC-CC-CEEEEeCCCchHHHHHHHHHCC-CCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCCC------
Confidence 334443 44 8999999999999999999886 569999999 6 321 146899999997621
Q ss_pred HHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEc
Q 003302 102 KVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVF 160 (832)
Q Consensus 102 ~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVF 160 (832)
+ ..||+|++.... -.|..+ .+..+|+.+.++|+|||+|++..+
T Consensus 231 ------~-~~~D~v~~~~vl---~~~~~~------~~~~~l~~~~~~L~pgG~l~i~e~ 273 (334)
T 2ip2_A 231 ------P-SNGDIYLLSRII---GDLDEA------ASLRLLGNCREAMAGDGRVVVIER 273 (334)
T ss_dssp ------C-SSCSEEEEESCG---GGCCHH------HHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred ------C-CCCCEEEEchhc---cCCCHH------HHHHHHHHHHHhcCCCCEEEEEEe
Confidence 1 458999986432 123222 134678899999999999998543
No 242
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.36 E-value=6.6e-07 Score=98.28 Aligned_cols=99 Identities=16% Similarity=0.149 Sum_probs=71.7
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC----------CC-CCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA----------PI-RGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~----------~i-~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
....+|||+|||+|.++..++...| +..|+|+|+..+. .+ ++|.++.+|+.+... ..+
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---------~~p- 246 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNK-EVEVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLDRDV---------PFP- 246 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHST-TCEEEEEECHHHHHHHHHHHTTCTTGGGEEEEECCCCSSSC---------CCC-
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCC-CCEEEEEeCHHHHHHHHHHHHhcCcccceEEEEccccccCC---------CCC-
Confidence 4568999999999999999999886 5799999993221 12 368999999987310 001
Q ss_pred CcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEE
Q 003302 110 RAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKV 159 (832)
Q Consensus 110 ~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KV 159 (832)
+.||+|++.... -.|..+ .+..+|+.+.++|+|||+|++.-
T Consensus 247 ~~~D~v~~~~vl---h~~~~~------~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 247 TGFDAVWMSQFL---DCFSEE------EVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp CCCSEEEEESCS---TTSCHH------HHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CCcCEEEEechh---hhCCHH------HHHHHHHHHHHhcCCCcEEEEEe
Confidence 568999987532 123322 13467889999999999998843
No 243
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.36 E-value=2.9e-07 Score=102.53 Aligned_cols=100 Identities=16% Similarity=0.171 Sum_probs=65.5
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-C---CCCCceEEEccCCChhHHHHHHHHHhhccCCcccEE
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-A---PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV 115 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-~---~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlV 115 (832)
+.++.+|||+|||+|.++..++.. +..|+|||+++. . ...++......+.. .....+. +.. ++||+|
T Consensus 105 ~~~~~~VLDiGcG~G~~~~~l~~~---g~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~-~~~~~l~--~~~---~~fD~I 175 (416)
T 4e2x_A 105 TGPDPFIVEIGCNDGIMLRTIQEA---GVRHLGFEPSSGVAAKAREKGIRVRTDFFEK-ATADDVR--RTE---GPANVI 175 (416)
T ss_dssp CSSSCEEEEETCTTTTTHHHHHHT---TCEEEEECCCHHHHHHHHTTTCCEECSCCSH-HHHHHHH--HHH---CCEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHc---CCcEEEECCCHHHHHHHHHcCCCcceeeech-hhHhhcc--cCC---CCEEEE
Confidence 467889999999999999999886 459999999972 1 11133333322211 1111111 222 678999
Q ss_pred EeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEE
Q 003302 116 LHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKV 159 (832)
Q Consensus 116 lsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KV 159 (832)
++..... |..+ ...+|+.+.++|+|||+|++.+
T Consensus 176 ~~~~vl~----h~~d-------~~~~l~~~~r~LkpgG~l~i~~ 208 (416)
T 4e2x_A 176 YAANTLC----HIPY-------VQSVLEGVDALLAPDGVFVFED 208 (416)
T ss_dssp EEESCGG----GCTT-------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECChHH----hcCC-------HHHHHHHHHHHcCCCeEEEEEe
Confidence 9985421 2222 3467888999999999999854
No 244
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.35 E-value=3.3e-07 Score=105.04 Aligned_cols=94 Identities=16% Similarity=0.249 Sum_probs=67.9
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC----------CC-CCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA----------PI-RGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~----------~i-~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
.++.+|||||||+|.++..++.. + ...|+|||++++. .+ .+|.++++|+.+.. + .
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~-~-~~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~~--------~----~ 222 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQA-G-ARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVS--------L----P 222 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHT-T-CSEEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTCC--------C----S
T ss_pred cCCCEEEEecCcccHHHHHHHHc-C-CCEEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhCc--------c----C
Confidence 46789999999999999988874 3 4699999999731 23 46899999998742 1 1
Q ss_pred CcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 110 RAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 110 ~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
+.||+|++++... ++..+ .....+..+.++|+|||.|++
T Consensus 223 ~~fD~Ivs~~~~~---~~~~e------~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 223 EQVDIIISEPMGY---MLFNE------RMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp SCEEEEECCCCHH---HHTCH------HHHHHHHHGGGGEEEEEEEES
T ss_pred CCeEEEEEeCchH---hcCcH------HHHHHHHHHHHhcCCCCEEEE
Confidence 5789999975311 11111 123455577899999999985
No 245
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.35 E-value=3.5e-06 Score=89.31 Aligned_cols=113 Identities=16% Similarity=0.098 Sum_probs=68.9
Q ss_pred HHHHHhhhhhcCCCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeC-CC-CC---------------CC-----CCc
Q 003302 27 SWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDL-VP-IA---------------PI-----RGA 84 (832)
Q Consensus 27 afKLiqi~~kf~fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDL-sp-~~---------------~i-----~~V 84 (832)
+..|.+....+.-+.++.+|||||||+|.++..++.. + .+.|+|||+ ++ +. .+ .+|
T Consensus 64 ~~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~-~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v 141 (281)
T 3bzb_A 64 ARALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLA-G-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASP 141 (281)
T ss_dssp HHHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHT-T-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCC
T ss_pred HHHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHc-C-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCe
Confidence 4445544333322346789999999999999988875 3 359999999 65 10 11 257
Q ss_pred eEEEccCCChhHHHHHHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcc---c--CcEEEE
Q 003302 85 VSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLA---P--KGTFVT 157 (832)
Q Consensus 85 ~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~Lk---p--GG~fV~ 157 (832)
.++..|+.+... .+...+. .+.||+|++...+. +..+ ...++..+.++|+ | ||.+++
T Consensus 142 ~~~~~~~~~~~~--~~~~~~~---~~~fD~Ii~~dvl~----~~~~-------~~~ll~~l~~~Lk~~~p~~gG~l~v 203 (281)
T 3bzb_A 142 KVVPYRWGDSPD--SLQRCTG---LQRFQVVLLADLLS----FHQA-------HDALLRSVKMLLALPANDPTAVALV 203 (281)
T ss_dssp EEEECCTTSCTH--HHHHHHS---CSSBSEEEEESCCS----CGGG-------HHHHHHHHHHHBCCTTTCTTCEEEE
T ss_pred EEEEecCCCccH--HHHhhcc---CCCCCEEEEeCccc----ChHH-------HHHHHHHHHHHhcccCCCCCCEEEE
Confidence 777666655211 1111111 26789999832211 1111 2345677889999 9 998776
No 246
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.34 E-value=1.5e-06 Score=93.82 Aligned_cols=103 Identities=13% Similarity=0.119 Sum_probs=74.1
Q ss_pred hhhhcCCCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCC-CC----------CC-CCceEEEccCCChhHHHHH
Q 003302 33 LDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVP-IA----------PI-RGAVSLEQDITKPECRARV 100 (832)
Q Consensus 33 i~~kf~fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp-~~----------~i-~~V~~i~gDIt~~~~~~~l 100 (832)
+...|. +.++.+|||+|||+|.++..++...| +..++++|+ + +. .+ ++|.++.+|+.++.
T Consensus 161 ~~~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----- 232 (332)
T 3i53_A 161 IAAKYD-WAALGHVVDVGGGSGGLLSALLTAHE-DLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDPL----- 232 (332)
T ss_dssp GGGSSC-CGGGSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-----
T ss_pred HHHhCC-CCCCCEEEEeCCChhHHHHHHHHHCC-CCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCCC-----
Confidence 333443 35568999999999999999999887 579999999 5 21 22 56999999997421
Q ss_pred HHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEc
Q 003302 101 KKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVF 160 (832)
Q Consensus 101 ~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVF 160 (832)
+ ..||+|++.... -.|..+ .+..+|+.+.++|+|||+|++..+
T Consensus 233 -------p-~~~D~v~~~~vl---h~~~~~------~~~~~l~~~~~~L~pgG~l~i~e~ 275 (332)
T 3i53_A 233 -------P-AGAGGYVLSAVL---HDWDDL------SAVAILRRCAEAAGSGGVVLVIEA 275 (332)
T ss_dssp -------C-CSCSEEEEESCG---GGSCHH------HHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred -------C-CCCcEEEEehhh---ccCCHH------HHHHHHHHHHHhcCCCCEEEEEee
Confidence 1 267999996432 112221 235678899999999999998543
No 247
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.33 E-value=5.4e-07 Score=99.68 Aligned_cols=101 Identities=13% Similarity=0.052 Sum_probs=69.1
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CC-CCceEEEccCCChhHHHHHHHHHhhc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PI-RGAVSLEQDITKPECRARVKKVMEEH 107 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i-~~V~~i~gDIt~~~~~~~l~~~L~~~ 107 (832)
..++.+|||+|||+|+++..++...+ .+.|+|+|+++.. .+ .++.++++|+.+...
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~-~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~----------- 282 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRY-SGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQ----------- 282 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTC-CSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGG-----------
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCc-----------
Confidence 46788999999999999999988754 4589999999721 23 468999999987531
Q ss_pred cCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 108 ~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
..+.||+|++|++... ..........+...++..+.++| ||++++
T Consensus 283 ~~~~fD~Ii~npPyg~---r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~ 327 (373)
T 3tm4_A 283 YVDSVDFAISNLPYGL---KIGKKSMIPDLYMKFFNELAKVL--EKRGVF 327 (373)
T ss_dssp TCSCEEEEEEECCCC---------CCHHHHHHHHHHHHHHHE--EEEEEE
T ss_pred ccCCcCEEEECCCCCc---ccCcchhHHHHHHHHHHHHHHHc--CCeEEE
Confidence 1267899999986432 11111111233456677788888 666665
No 248
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.30 E-value=2.8e-06 Score=93.78 Aligned_cols=129 Identities=21% Similarity=0.218 Sum_probs=80.9
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC--------C------C--C---CceEEEccCCChhHHHHHH
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA--------P------I--R---GAVSLEQDITKPECRARVK 101 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~--------~------i--~---~V~~i~gDIt~~~~~~~l~ 101 (832)
..+.+||+||||.|+++..++++. + ..|++||+++.. + + | ++.++.+|.... +.
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~-~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~-----L~ 259 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLK-P-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPV-----LK 259 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTC-C-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHH-----HH
T ss_pred CCCCEEEEEECChhHHHHHHHHCC-C-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHH-----HH
Confidence 356899999999999999888774 3 699999999621 1 1 2 588889987652 22
Q ss_pred HHHhhccCCcccEEEeCCCC-CCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHH----HHHHcc
Q 003302 102 KVMEEHGVRAFDLVLHDGSP-NVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLY----CLKQLF 176 (832)
Q Consensus 102 ~~L~~~~~~~FDlVlsDgap-nv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~----~L~~~F 176 (832)
..... ...||+|++|++. ..+.. +...........++..+.++|+|||.|++..-...- ..++. .|+.+|
T Consensus 260 ~~~~~--~~~fDvII~D~~d~P~~~~--p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~-~e~~~~~~~~l~~~F 334 (364)
T 2qfm_A 260 RYAKE--GREFDYVINDLTAVPISTS--PEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNL-TEALSLYEEQLGRLY 334 (364)
T ss_dssp HHHHH--TCCEEEEEEECCSSCCCCC------CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTC-HHHHHHHHHHHTTSS
T ss_pred hhhcc--CCCceEEEECCCCcccCcC--chhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcch-HHHHHHHHHHHHHhC
Confidence 11111 1678999999752 11111 111111223344556678999999999985433322 33332 366689
Q ss_pred cceEE
Q 003302 177 EKVEV 181 (832)
Q Consensus 177 ~~V~~ 181 (832)
..|..
T Consensus 335 ~~v~~ 339 (364)
T 2qfm_A 335 CPVEF 339 (364)
T ss_dssp SCEEE
T ss_pred CceEE
Confidence 88876
No 249
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.30 E-value=1.8e-06 Score=93.96 Aligned_cols=98 Identities=17% Similarity=0.280 Sum_probs=71.5
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCC-CC----------CC-CCceEEEccCCChhHHHHHHHHHhhc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVP-IA----------PI-RGAVSLEQDITKPECRARVKKVMEEH 107 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp-~~----------~i-~~V~~i~gDIt~~~~~~~l~~~L~~~ 107 (832)
+.++.+|||+|||+|.++..++...| ...++++|+ + +. .+ .+|.++++|+.+. +.
T Consensus 181 ~~~~~~vLDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---------~~-- 247 (360)
T 1tw3_A 181 WTNVRHVLDVGGGKGGFAAAIARRAP-HVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEP---------LP-- 247 (360)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSC---------CS--
T ss_pred CccCcEEEEeCCcCcHHHHHHHHhCC-CCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCC---------CC--
Confidence 35678999999999999999999876 579999998 5 21 13 2699999999762 11
Q ss_pred cCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcC
Q 003302 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFR 161 (832)
Q Consensus 108 ~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFr 161 (832)
..||+|++..... .|. + ..+..+|+.+.++|+|||+|++..+.
T Consensus 248 --~~~D~v~~~~vl~---~~~-~-----~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 248 --RKADAIILSFVLL---NWP-D-----HDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp --SCEEEEEEESCGG---GSC-H-----HHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred --CCccEEEEccccc---CCC-H-----HHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 3489999875321 121 1 11346788899999999999986543
No 250
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.28 E-value=5.4e-07 Score=101.92 Aligned_cols=105 Identities=15% Similarity=0.171 Sum_probs=70.2
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCC------------CCCEEEEEeCCCC-----------CCCC--CceEEEccCCChh
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVP------------VGSLVLGLDLVPI-----------APIR--GAVSLEQDITKPE 95 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p------------~~~~ViGVDLsp~-----------~~i~--~V~~i~gDIt~~~ 95 (832)
.++.+|||.|||+|+++..++.++. ....|+|+|+++. ..+. ++.++++|.....
T Consensus 170 ~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~ 249 (445)
T 2okc_A 170 QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKE 249 (445)
T ss_dssp CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSC
T ss_pred CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCc
Confidence 4678999999999999998887641 1357999999962 1232 5678899987632
Q ss_pred HHHHHHHHHhhccCCcccEEEeCCCCCCCCCchhH-H-----hH--HhHHHHHHHHHHHhhcccCcEEEEEE
Q 003302 96 CRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE-A-----MS--QNALVIDSVKLATQFLAPKGTFVTKV 159 (832)
Q Consensus 96 ~~~~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D-~-----~~--q~~L~~~aLk~A~~~LkpGG~fV~KV 159 (832)
. ...||+|++|++... .|..+ . +. ........+..++++|+|||++++-+
T Consensus 250 ~------------~~~fD~Iv~NPPf~~--~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~ 307 (445)
T 2okc_A 250 P------------STLVDVILANPPFGT--RPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVL 307 (445)
T ss_dssp C------------SSCEEEEEECCCSSC--CCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred c------------cCCcCEEEECCCCCC--cccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEE
Confidence 1 147899999986442 22111 0 00 00112345677889999999998855
No 251
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.25 E-value=2.5e-06 Score=93.21 Aligned_cols=97 Identities=13% Similarity=0.189 Sum_probs=72.0
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC----CCCCCceEEEccCCChhHHHHHHHHHhhccCCcccEE
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI----APIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV 115 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~----~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlV 115 (832)
+.++.+|||+|||+|.++..++...| +..++++|+..+ ...++|.++++|+.++ + ..||+|
T Consensus 191 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~---------~-----~~~D~v 255 (358)
T 1zg3_A 191 FEGLESLVDVGGGTGGVTKLIHEIFP-HLKCTVFDQPQVVGNLTGNENLNFVGGDMFKS---------I-----PSADAV 255 (358)
T ss_dssp HHTCSEEEEETCTTSHHHHHHHHHCT-TSEEEEEECHHHHSSCCCCSSEEEEECCTTTC---------C-----CCCSEE
T ss_pred ccCCCEEEEECCCcCHHHHHHHHHCC-CCeEEEeccHHHHhhcccCCCcEEEeCccCCC---------C-----CCceEE
Confidence 34668999999999999999999986 578999999533 1346799999999762 1 247999
Q ss_pred EeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhccc---CcEEEEEEc
Q 003302 116 LHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAP---KGTFVTKVF 160 (832)
Q Consensus 116 lsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~Lkp---GG~fV~KVF 160 (832)
++..... .|. +. .+..+|+.+.++|+| ||+|++..+
T Consensus 256 ~~~~vlh---~~~-d~-----~~~~~l~~~~~~L~p~~~gG~l~i~e~ 294 (358)
T 1zg3_A 256 LLKWVLH---DWN-DE-----QSLKILKNSKEAISHKGKDGKVIIIDI 294 (358)
T ss_dssp EEESCGG---GSC-HH-----HHHHHHHHHHHHTGGGGGGCEEEEEEC
T ss_pred EEccccc---CCC-HH-----HHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 9874321 122 21 234678899999999 999988543
No 252
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.25 E-value=4.2e-08 Score=101.90 Aligned_cols=104 Identities=10% Similarity=0.074 Sum_probs=67.1
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCC-CCC--------CCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVP-IAP--------IRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp-~~~--------i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
+.++.+|||+|||+|.++..++... +.|+|||+++ +.. .+++.++++|+.+... .. .+
T Consensus 27 ~~~~~~VLDiG~G~G~~~~~l~~~~---~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~--------~~--~~ 93 (245)
T 1yub_A 27 LKETDTVYEIGTGKGHLTTKLAKIS---KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQF--------PN--KQ 93 (245)
T ss_dssp CCSSEEEEECSCCCSSCSHHHHHHS---SEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTC--------CC--SS
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhC---CeEEEEECCHHHHHHHHHHhccCCceEEEECChhhcCc--------cc--CC
Confidence 3578899999999999999999883 6999999997 221 2468889999987431 10 15
Q ss_pred cccEEEeCCCCCCCCCchhHHhHHhHHHHHHH----HHHHhhcccCcEEEE
Q 003302 111 AFDLVLHDGSPNVGGAWAQEAMSQNALVIDSV----KLATQFLAPKGTFVT 157 (832)
Q Consensus 111 ~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aL----k~A~~~LkpGG~fV~ 157 (832)
.| +|++|++.+...........+.......+ ..+.++|+|||.|++
T Consensus 94 ~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v 143 (245)
T 1yub_A 94 RY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGL 143 (245)
T ss_dssp EE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHH
T ss_pred Cc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhh
Confidence 68 88898765443210000000000001122 558899999998765
No 253
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.25 E-value=2.8e-06 Score=90.46 Aligned_cols=97 Identities=12% Similarity=0.111 Sum_probs=65.9
Q ss_pred CCCEEEEEcCCcCH----HHHHHHHhCCC---CCEEEEEeCCCC-C-----C---------C------------------
Q 003302 42 SSHAVLDLCAAPGG----WMQVAVQRVPV---GSLVLGLDLVPI-A-----P---------I------------------ 81 (832)
Q Consensus 42 ~g~~VLDLGcGPGg----~sq~La~~~p~---~~~ViGVDLsp~-~-----~---------i------------------ 81 (832)
++.+|+|+|||+|. ++..++..++. +..|+|+|+++- . . +
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35689999999998 55666666442 358999999951 0 0 0
Q ss_pred ---------CCceEEEccCCChhHHHHHHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccC
Q 003302 82 ---------RGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPK 152 (832)
Q Consensus 82 ---------~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpG 152 (832)
..|.|.++|+.+++. . ..+.||+|+|.. +- .+. +. .....++..+.+.|+||
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~--------~--~~~~fDlI~crn---vl-iyf-~~----~~~~~vl~~~~~~L~pg 245 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQY--------N--VPGPFDAIFCRN---VM-IYF-DK----TTQEDILRRFVPLLKPD 245 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSC--------C--CCCCEEEEEECS---SG-GGS-CH----HHHHHHHHHHGGGEEEE
T ss_pred ceeechhhcccCeEEecccCCCCC--------C--cCCCeeEEEECC---ch-HhC-CH----HHHHHHHHHHHHHhCCC
Confidence 147888899887321 0 026799999953 21 111 11 23467888999999999
Q ss_pred cEEEE
Q 003302 153 GTFVT 157 (832)
Q Consensus 153 G~fV~ 157 (832)
|+|++
T Consensus 246 G~L~l 250 (274)
T 1af7_A 246 GLLFA 250 (274)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 99987
No 254
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.24 E-value=1.1e-06 Score=93.82 Aligned_cols=67 Identities=21% Similarity=0.356 Sum_probs=52.7
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCC-CC----------CC-CCceEEEccCCChhHHHHHHHHHhhc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVP-IA----------PI-RGAVSLEQDITKPECRARVKKVMEEH 107 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp-~~----------~i-~~V~~i~gDIt~~~~~~~l~~~L~~~ 107 (832)
+.++.+|||+|||+|.++..++.. ++.|+|||+++ +. .. +++.++++|+....
T Consensus 26 ~~~~~~VLDiG~G~G~lt~~L~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~------------ 90 (285)
T 1zq9_A 26 LRPTDVVLEVGPGTGNMTVKLLEK---AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTD------------ 90 (285)
T ss_dssp CCTTCEEEEECCTTSTTHHHHHHH---SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSC------------
T ss_pred CCCCCEEEEEcCcccHHHHHHHhh---CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceeccc------------
Confidence 357889999999999999999987 35899999996 21 12 46899999998642
Q ss_pred cCCcccEEEeCCCCC
Q 003302 108 GVRAFDLVLHDGSPN 122 (832)
Q Consensus 108 ~~~~FDlVlsDgapn 122 (832)
...||+|++|.+.+
T Consensus 91 -~~~fD~vv~nlpy~ 104 (285)
T 1zq9_A 91 -LPFFDTCVANLPYQ 104 (285)
T ss_dssp -CCCCSEEEEECCGG
T ss_pred -chhhcEEEEecCcc
Confidence 14679999987643
No 255
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.24 E-value=3.2e-06 Score=93.06 Aligned_cols=102 Identities=15% Similarity=0.246 Sum_probs=74.0
Q ss_pred hhhhcCCCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCC-CC----------C-CCCceEEEccCCChhHHHHH
Q 003302 33 LDSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVP-IA----------P-IRGAVSLEQDITKPECRARV 100 (832)
Q Consensus 33 i~~kf~fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp-~~----------~-i~~V~~i~gDIt~~~~~~~l 100 (832)
+...|. +.++.+|||+|||+|.++..++...| +..++++|+ + +. . ..+|.++.+|+.++.
T Consensus 194 l~~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~----- 265 (369)
T 3gwz_A 194 VAAAYD-FSGAATAVDIGGGRGSLMAAVLDAFP-GLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFETI----- 265 (369)
T ss_dssp HHHHSC-CTTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTCC-----
T ss_pred HHHhCC-CccCcEEEEeCCCccHHHHHHHHHCC-CCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCCC-----
Confidence 344454 35678999999999999999999876 679999999 5 21 1 246999999998421
Q ss_pred HHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEE
Q 003302 101 KKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKV 159 (832)
Q Consensus 101 ~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KV 159 (832)
+ ..||+|++..... .|..+ .+..+|+.+.++|+|||+|++..
T Consensus 266 -------p-~~~D~v~~~~vlh---~~~d~------~~~~~L~~~~~~L~pgG~l~i~e 307 (369)
T 3gwz_A 266 -------P-DGADVYLIKHVLH---DWDDD------DVVRILRRIATAMKPDSRLLVID 307 (369)
T ss_dssp -------C-SSCSEEEEESCGG---GSCHH------HHHHHHHHHHTTCCTTCEEEEEE
T ss_pred -------C-CCceEEEhhhhhc---cCCHH------HHHHHHHHHHHHcCCCCEEEEEE
Confidence 1 2679999875321 12221 23467889999999999999854
No 256
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.21 E-value=2.8e-07 Score=93.47 Aligned_cols=92 Identities=7% Similarity=-0.054 Sum_probs=62.5
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCC-CC----------CCC-CceEEEccCCChhHHHHHHHHHhhc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVP-IA----------PIR-GAVSLEQDITKPECRARVKKVMEEH 107 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp-~~----------~i~-~V~~i~gDIt~~~~~~~l~~~L~~~ 107 (832)
+.+..+|||||||+|.++..++...| ...|+|+|+++ |. ... ++.+ +|.... .
T Consensus 47 l~~~~~VLDlGCG~GplAl~l~~~~p-~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~---------~--- 111 (200)
T 3fzg_A 47 IKHVSSILDFGCGFNPLALYQWNENE-KIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESD---------V--- 111 (200)
T ss_dssp SCCCSEEEEETCTTHHHHHHHHCSSC-CCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHH---------H---
T ss_pred cCCCCeEEEecCCCCHHHHHHHhcCC-CCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccccc---------C---
Confidence 57788999999999999999988766 55999999997 21 122 2333 444321 1
Q ss_pred cCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 108 GVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 108 ~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
..++||+|++.-. .+..+. ...++..++..|+|||.||.
T Consensus 112 ~~~~~DvVLa~k~-----LHlL~~------~~~al~~v~~~L~pggvfIS 150 (200)
T 3fzg_A 112 YKGTYDVVFLLKM-----LPVLKQ------QDVNILDFLQLFHTQNFVIS 150 (200)
T ss_dssp TTSEEEEEEEETC-----HHHHHH------TTCCHHHHHHTCEEEEEEEE
T ss_pred CCCCcChhhHhhH-----HHhhhh------hHHHHHHHHHHhCCCCEEEE
Confidence 2278899998521 111111 12344578899999999996
No 257
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.17 E-value=1.7e-06 Score=96.21 Aligned_cols=91 Identities=18% Similarity=0.100 Sum_probs=66.0
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----------C---------------CCCCceEEEccCCChh
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----------A---------------PIRGAVSLEQDITKPE 95 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----------~---------------~i~~V~~i~gDIt~~~ 95 (832)
++.+|||||||+|+++..++..++ ...|++||+++- + .+.++.++++|+....
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~-~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~ 125 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETP-AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLM 125 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSS-CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHH
Confidence 578999999999999999999876 458999999962 1 2334778888876531
Q ss_pred HHHHHHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEE
Q 003302 96 CRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTK 158 (832)
Q Consensus 96 ~~~~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~K 158 (832)
... ...||+|+.|+. . .. ...+..|.+.|+|||.+++.
T Consensus 126 ---------~~~-~~~fD~I~lDP~-~--~~------------~~~l~~a~~~lk~gG~l~vt 163 (378)
T 2dul_A 126 ---------AER-HRYFHFIDLDPF-G--SP------------MEFLDTALRSAKRRGILGVT 163 (378)
T ss_dssp ---------HHS-TTCEEEEEECCS-S--CC------------HHHHHHHHHHEEEEEEEEEE
T ss_pred ---------Hhc-cCCCCEEEeCCC-C--CH------------HHHHHHHHHhcCCCCEEEEE
Confidence 111 156899999973 1 10 13455678899999988764
No 258
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.13 E-value=1.9e-06 Score=95.13 Aligned_cols=94 Identities=10% Similarity=0.091 Sum_probs=64.1
Q ss_pred CCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----------CCCCCceEEEccCCChhHHHHHHHHHhhcc---
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----------APIRGAVSLEQDITKPECRARVKKVMEEHG--- 108 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----------~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~--- 108 (832)
+.+|||||||+|.++..++.. ...|+|||+++- +.+.++.++++|+.+.. ..+....
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~---~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~------~~~~~~~~~~ 284 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN---FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFT------QAMNGVREFN 284 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG---SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHH------HHHSSCCCCT
T ss_pred CCEEEEccCCCCHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHH------HHHhhccccc
Confidence 578999999999999999875 358999999972 23567999999986531 1111100
Q ss_pred --------CCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCC
Q 003302 109 --------VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRS 162 (832)
Q Consensus 109 --------~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs 162 (832)
...||+|++|++.. |. ...+.++|++||.+|+....+
T Consensus 285 ~l~~~~~~~~~fD~Vv~dPPr~--g~---------------~~~~~~~l~~~g~ivyvsc~p 329 (369)
T 3bt7_A 285 RLQGIDLKSYQCETIFVDPPRS--GL---------------DSETEKMVQAYPRILYISCNP 329 (369)
T ss_dssp TGGGSCGGGCCEEEEEECCCTT--CC---------------CHHHHHHHTTSSEEEEEESCH
T ss_pred cccccccccCCCCEEEECcCcc--cc---------------HHHHHHHHhCCCEEEEEECCH
Confidence 02689999997521 21 113456677999998854443
No 259
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.13 E-value=6.2e-06 Score=90.40 Aligned_cols=102 Identities=17% Similarity=0.165 Sum_probs=73.5
Q ss_pred hhhcCCCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC----------CCCCceEEEccCCChhHHHHHHHH
Q 003302 34 DSKFSFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA----------PIRGAVSLEQDITKPECRARVKKV 103 (832)
Q Consensus 34 ~~kf~fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~----------~i~~V~~i~gDIt~~~~~~~l~~~ 103 (832)
...|. +.+..+|||+|||+|.++..+++..| +..++.+|+..+. ...+|.++.+|+.+.+
T Consensus 172 ~~~~~-~~~~~~v~DvGgG~G~~~~~l~~~~p-~~~~~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD~~~~~-------- 241 (353)
T 4a6d_A 172 LTAFD-LSVFPLMCDLGGGAGALAKECMSLYP-GCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKDP-------- 241 (353)
T ss_dssp HHSSC-GGGCSEEEEETCTTSHHHHHHHHHCS-SCEEEEEECHHHHHHHHHHSCC--CCSEEEEESCTTTSC--------
T ss_pred HHhcC-cccCCeEEeeCCCCCHHHHHHHHhCC-CceeEeccCHHHHHHHHHhhhhcccCceeeecCccccCC--------
Confidence 33444 45667999999999999999999987 6789999985321 2357999999997642
Q ss_pred HhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEE
Q 003302 104 MEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKV 159 (832)
Q Consensus 104 L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KV 159 (832)
...+|+|++.... -.|..+ -+..+|+.+.+.|+|||+|++.-
T Consensus 242 -----~~~~D~~~~~~vl---h~~~d~------~~~~iL~~~~~al~pgg~lli~e 283 (353)
T 4a6d_A 242 -----LPEADLYILARVL---HDWADG------KCSHLLERIYHTCKPGGGILVIE 283 (353)
T ss_dssp -----CCCCSEEEEESSG---GGSCHH------HHHHHHHHHHHHCCTTCEEEEEE
T ss_pred -----CCCceEEEeeeec---ccCCHH------HHHHHHHHHHhhCCCCCEEEEEE
Confidence 1345999985321 123322 24567899999999999998843
No 260
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.12 E-value=1.1e-05 Score=93.63 Aligned_cols=107 Identities=18% Similarity=0.179 Sum_probs=70.5
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCC-----------------CCEEEEEeCCCC-----------CCCCC-----ceEE
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPV-----------------GSLVLGLDLVPI-----------APIRG-----AVSL 87 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~-----------------~~~ViGVDLsp~-----------~~i~~-----V~~i 87 (832)
.++.+|||.|||+|+|+..++.++.. ...|+|+|+++. ..+.+ +.++
T Consensus 168 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~ 247 (541)
T 2ar0_A 168 QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIR 247 (541)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEE
T ss_pred CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeE
Confidence 46789999999999999888876532 136999999962 12333 6778
Q ss_pred EccCCChhHHHHHHHHHhhccCCcccEEEeCCCCCCCCCchhH---Hh--HHhHHHHHHHHHHHhhcccCcEEEEEE
Q 003302 88 EQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQE---AM--SQNALVIDSVKLATQFLAPKGTFVTKV 159 (832)
Q Consensus 88 ~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D---~~--~q~~L~~~aLk~A~~~LkpGG~fV~KV 159 (832)
++|...... . ....||+|++||++.. .|..+ .+ .........+..++++|+|||++++-+
T Consensus 248 ~gDtL~~~~-------~---~~~~fD~Vv~NPPf~~--~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~ 312 (541)
T 2ar0_A 248 LGNTLGSDG-------E---NLPKAHIVATNPPFGS--AAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVV 312 (541)
T ss_dssp ESCTTSHHH-------H---TSCCEEEEEECCCCTT--CSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eCCCccccc-------c---cccCCeEEEECCCccc--ccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEe
Confidence 999776421 1 1267899999986543 22110 00 000111245677889999999998854
No 261
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.07 E-value=3e-06 Score=91.00 Aligned_cols=66 Identities=18% Similarity=0.194 Sum_probs=49.1
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----------CCCCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----------APIRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----------~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
+.++.+|||+|||+|.++..++.. ++.|+|||+++- ..++++.++++|+....
T Consensus 40 ~~~~~~VLDiG~G~G~lt~~La~~---~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~------------- 103 (299)
T 2h1r_A 40 IKSSDIVLEIGCGTGNLTVKLLPL---AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTV------------- 103 (299)
T ss_dssp CCTTCEEEEECCTTSTTHHHHTTT---SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSC-------------
T ss_pred CCCcCEEEEEcCcCcHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCC-------------
Confidence 357889999999999999999876 469999999962 13467899999998742
Q ss_pred CCcccEEEeCCCC
Q 003302 109 VRAFDLVLHDGSP 121 (832)
Q Consensus 109 ~~~FDlVlsDgap 121 (832)
...||+|++|.+.
T Consensus 104 ~~~~D~Vv~n~py 116 (299)
T 2h1r_A 104 FPKFDVCTANIPY 116 (299)
T ss_dssp CCCCSEEEEECCG
T ss_pred cccCCEEEEcCCc
Confidence 1468999999753
No 262
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.07 E-value=5.5e-07 Score=93.85 Aligned_cols=52 Identities=17% Similarity=0.289 Sum_probs=43.1
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCC-C--------CCCCCceEEEccCCCh
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVP-I--------APIRGAVSLEQDITKP 94 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp-~--------~~i~~V~~i~gDIt~~ 94 (832)
+.++.+|||+|||+|.++..++... +.|+|||+++ + ...+++.++++|+...
T Consensus 28 ~~~~~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~ 88 (244)
T 1qam_A 28 LNEHDNIFEIGSGKGHFTLELVQRC---NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQF 88 (244)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGC
T ss_pred CCCCCEEEEEeCCchHHHHHHHHcC---CeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhC
Confidence 3578899999999999999999884 6999999996 2 1236799999999764
No 263
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.02 E-value=1.5e-05 Score=89.87 Aligned_cols=71 Identities=20% Similarity=0.313 Sum_probs=53.3
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----------CCCCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----------APIRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----------~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
+.++.+|||||||+|.++..++.. .+.|+|||+++. ..+.++.++++|+.+... .+. ..
T Consensus 284 ~~~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~------~~~-~~ 353 (433)
T 1uwv_A 284 VQPEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVT------KQP-WA 353 (433)
T ss_dssp CCTTCEEEEESCTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCS------SSG-GG
T ss_pred CCCCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhh------hhh-hh
Confidence 356789999999999999999987 469999999962 235689999999987310 000 11
Q ss_pred CCcccEEEeCCC
Q 003302 109 VRAFDLVLHDGS 120 (832)
Q Consensus 109 ~~~FDlVlsDga 120 (832)
.+.||+|++|++
T Consensus 354 ~~~fD~Vv~dPP 365 (433)
T 1uwv_A 354 KNGFDKVLLDPA 365 (433)
T ss_dssp TTCCSEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 156899999975
No 264
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.99 E-value=2.9e-05 Score=93.06 Aligned_cols=109 Identities=8% Similarity=0.061 Sum_probs=69.0
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCC--CCEEEEEeCCCCC-----------------CCCCceEEEccCCChhHHHHHH
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPV--GSLVLGLDLVPIA-----------------PIRGAVSLEQDITKPECRARVK 101 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~--~~~ViGVDLsp~~-----------------~i~~V~~i~gDIt~~~~~~~l~ 101 (832)
.++.+|||.|||+|+++..++..++. ...|+|+|+++.. .+....+...|+..+.
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~------ 393 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLN------ 393 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCC------
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhccc------
Confidence 46789999999999999999988751 3579999999731 0111233444554421
Q ss_pred HHHhhccCCcccEEEeCCCCCCCCCchhHH--hHH----------------hHHHHHHHHHHHhhcccCcEEEEEE
Q 003302 102 KVMEEHGVRAFDLVLHDGSPNVGGAWAQEA--MSQ----------------NALVIDSVKLATQFLAPKGTFVTKV 159 (832)
Q Consensus 102 ~~L~~~~~~~FDlVlsDgapnv~g~w~~D~--~~q----------------~~L~~~aLk~A~~~LkpGG~fV~KV 159 (832)
......||+|++||+......+.... +.. ..+....+..|..+|+|||++++-+
T Consensus 394 ----~~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIl 465 (878)
T 3s1s_A 394 ----PEDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIM 465 (878)
T ss_dssp ----GGGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred ----ccccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEE
Confidence 01126789999998654322222111 000 0123456778999999999999844
No 265
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.98 E-value=2e-05 Score=91.52 Aligned_cols=109 Identities=13% Similarity=0.154 Sum_probs=72.5
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCC--CCCEEEEEeCCCCC-----------CC--CCceEEEccCCChhHHHHHHHHHh
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVP--VGSLVLGLDLVPIA-----------PI--RGAVSLEQDITKPECRARVKKVME 105 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p--~~~~ViGVDLsp~~-----------~i--~~V~~i~gDIt~~~~~~~l~~~L~ 105 (832)
.++.+|+|.|||+|+++..++.++. ....|+|+|+++.. .+ .++.+.++|...... +
T Consensus 220 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~--------p 291 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDW--------P 291 (542)
T ss_dssp CTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCS--------C
T ss_pred CCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccc--------c
Confidence 4678999999999999998888863 25689999999731 23 345678898765310 0
Q ss_pred hccCCcccEEEeCCCCCCCCCchhHH-------hHHh-------HHHHHHHHHHHhhcc-cCcEEEEEE
Q 003302 106 EHGVRAFDLVLHDGSPNVGGAWAQEA-------MSQN-------ALVIDSVKLATQFLA-PKGTFVTKV 159 (832)
Q Consensus 106 ~~~~~~FDlVlsDgapnv~g~w~~D~-------~~q~-------~L~~~aLk~A~~~Lk-pGG~fV~KV 159 (832)
......||+|++||+.. +.|..+. +... ..-...+..+..+|+ |||++++-+
T Consensus 292 ~~~~~~fD~IvaNPPf~--~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~Vl 358 (542)
T 3lkd_A 292 TQEPTNFDGVLMNPPYS--AKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVL 358 (542)
T ss_dssp CSSCCCBSEEEECCCTT--CCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEE
T ss_pred ccccccccEEEecCCcC--CccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEe
Confidence 01126789999998754 3342110 1100 001246778899999 999998744
No 266
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=97.95 E-value=6.2e-06 Score=96.18 Aligned_cols=101 Identities=20% Similarity=0.123 Sum_probs=64.2
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
+.++.+|||+|||.|.++..|++. ++.|+|||+++.. +..+|.|.++++.++. ..+ .
T Consensus 64 ~~~~~~vLDvGCG~G~~~~~la~~---ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~------~~~---~ 131 (569)
T 4azs_A 64 LGRPLNVLDLGCAQGFFSLSLASK---GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVI------AAL---E 131 (569)
T ss_dssp HTSCCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHH------HHC---C
T ss_pred cCCCCeEEEECCCCcHHHHHHHhC---CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHh------hhc---c
Confidence 356679999999999999999986 6799999999721 2235788888876531 111 1
Q ss_pred CCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcC
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFR 161 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFr 161 (832)
.+.||+|+|-... .|..+... +..+ ...+..|+++|..++..+.
T Consensus 132 ~~~fD~v~~~e~~----ehv~~~~~----~~~~-~~~~~tl~~~~~~~~~~~~ 175 (569)
T 4azs_A 132 EGEFDLAIGLSVF----HHIVHLHG----IDEV-KRLLSRLADVTQAVILELA 175 (569)
T ss_dssp TTSCSEEEEESCH----HHHHHHHC----HHHH-HHHHHHHHHHSSEEEEECC
T ss_pred CCCccEEEECcch----hcCCCHHH----HHHH-HHHHHHhccccceeeEEec
Confidence 2679999997531 23333211 1111 2245567777665543433
No 267
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=97.95 E-value=9.4e-06 Score=87.61 Aligned_cols=74 Identities=16% Similarity=0.337 Sum_probs=56.1
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC---------CC-CCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA---------PI-RGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~---------~i-~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
+.++.+|||+|||+|+++..++..+| ++.|+|||+++.. .. .++.++++|+.++.. .+.....
T Consensus 24 ~~~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~------~l~~~g~ 96 (301)
T 1m6y_A 24 PEDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADF------LLKTLGI 96 (301)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHH------HHHHTTC
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHH------HHHhcCC
Confidence 35788999999999999999999987 6799999999721 11 579999999887431 1221112
Q ss_pred CcccEEEeCCC
Q 003302 110 RAFDLVLHDGS 120 (832)
Q Consensus 110 ~~FDlVlsDga 120 (832)
..||.|++|+.
T Consensus 97 ~~~D~Vl~D~g 107 (301)
T 1m6y_A 97 EKVDGILMDLG 107 (301)
T ss_dssp SCEEEEEEECS
T ss_pred CCCCEEEEcCc
Confidence 46899999964
No 268
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=97.94 E-value=2.2e-05 Score=88.58 Aligned_cols=88 Identities=20% Similarity=0.173 Sum_probs=62.9
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
+.++.+|||||||+|.++..++.. ...|+|||+++.. .+. +.++++|+.+.. .
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~---~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~---------~--- 351 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR---GFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVS---------V--- 351 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCC---------C---
T ss_pred cCCCCEEEEeeccchHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcC---------c---
Confidence 467889999999999999999986 4599999999621 244 889999998742 1
Q ss_pred CCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEE
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTK 158 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~K 158 (832)
..||+|++|++. .|.. . .++ .+...|+|||.+++.
T Consensus 352 -~~fD~Vv~dPPr--~g~~--~---------~~~-~~l~~l~p~givyvs 386 (425)
T 2jjq_A 352 -KGFDTVIVDPPR--AGLH--P---------RLV-KRLNREKPGVIVYVS 386 (425)
T ss_dssp -TTCSEEEECCCT--TCSC--H---------HHH-HHHHHHCCSEEEEEE
T ss_pred -cCCCEEEEcCCc--cchH--H---------HHH-HHHHhcCCCcEEEEE
Confidence 257999999752 1211 0 111 122348999998874
No 269
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.86 E-value=1.5e-05 Score=89.48 Aligned_cols=114 Identities=14% Similarity=0.086 Sum_probs=74.5
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-------------CCCCceEEEccCCChhHHHHHHHHHhh
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-------------PIRGAVSLEQDITKPECRARVKKVMEE 106 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-------------~i~~V~~i~gDIt~~~~~~~l~~~L~~ 106 (832)
+.+|.+|||||||+|+.+.+++.. ++.|+|||+++.. .+.++.++++|+.+.-. .+..
T Consensus 91 l~~g~~VLDLgcG~G~~al~LA~~---g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~------~~~~ 161 (410)
T 3ll7_A 91 IREGTKVVDLTGGLGIDFIALMSK---ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLP------LIKT 161 (410)
T ss_dssp SCTTCEEEESSCSSSHHHHHHHTT---CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHH------HHHH
T ss_pred cCCCCEEEEeCCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhh------hccC
Confidence 445899999999999999998876 4699999999721 23468999999987311 1112
Q ss_pred ccCCcccEEEeCCCCCCC--C-CchhHHhHHhHHHHHHHHHHHh-hcccCcEEEEEEcCCCCHHHHHHH
Q 003302 107 HGVRAFDLVLHDGSPNVG--G-AWAQEAMSQNALVIDSVKLATQ-FLAPKGTFVTKVFRSQDYSSVLYC 171 (832)
Q Consensus 107 ~~~~~FDlVlsDgapnv~--g-~w~~D~~~q~~L~~~aLk~A~~-~LkpGG~fV~KVFrs~d~~~ll~~ 171 (832)
..||+|++|++...+ + .|..+.... -+..... ++..+..+++|+-+.-++...+..
T Consensus 162 ---~~fDvV~lDPPrr~~~~grv~~led~~P------~l~~~~~~l~~~~~~~~vK~sP~ld~~~~~~~ 221 (410)
T 3ll7_A 162 ---FHPDYIYVDPARRSGADKRVYAIADCEP------DLIPLATELLPFCSSILAKLSPMIDLWDTLQS 221 (410)
T ss_dssp ---HCCSEEEECCEEC-----CCCCGGGEES------CHHHHHHHHGGGSSEEEEEECTTSCHHHHHHH
T ss_pred ---CCceEEEECCCCcCCCCceEEehhhcCC------CHHHHHHHHHhhCCcEEEEcCCCCChHHHHhh
Confidence 467999999853321 1 244433221 1122333 455677888899888787654433
No 270
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=97.83 E-value=1.6e-05 Score=85.54 Aligned_cols=68 Identities=13% Similarity=0.098 Sum_probs=54.4
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-C--------CCCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-A--------PIRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-~--------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
+.++.+|||+|||+|.++..|+.. +..|+|||+++- . ..+++.++++|+..... .. .
T Consensus 48 ~~~~~~VLEIG~G~G~lT~~La~~---~~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~--------~~---~ 113 (295)
T 3gru_A 48 LTKDDVVLEIGLGKGILTEELAKN---AKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDL--------NK---L 113 (295)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCG--------GG---S
T ss_pred CCCcCEEEEECCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCc--------cc---C
Confidence 457889999999999999999987 469999999983 2 23689999999987531 11 4
Q ss_pred cccEEEeCCCC
Q 003302 111 AFDLVLHDGSP 121 (832)
Q Consensus 111 ~FDlVlsDgap 121 (832)
.||+|++|.+.
T Consensus 114 ~fD~Iv~NlPy 124 (295)
T 3gru_A 114 DFNKVVANLPY 124 (295)
T ss_dssp CCSEEEEECCG
T ss_pred CccEEEEeCcc
Confidence 58999999754
No 271
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.74 E-value=2.2e-05 Score=91.20 Aligned_cols=104 Identities=18% Similarity=0.200 Sum_probs=64.6
Q ss_pred EEEEEcCCcCHHHHHHHHhCCC--------------CCEEEEEeCCCCC-----------CCC-CceEEEccCCChhHHH
Q 003302 45 AVLDLCAAPGGWMQVAVQRVPV--------------GSLVLGLDLVPIA-----------PIR-GAVSLEQDITKPECRA 98 (832)
Q Consensus 45 ~VLDLGcGPGg~sq~La~~~p~--------------~~~ViGVDLsp~~-----------~i~-~V~~i~gDIt~~~~~~ 98 (832)
+|||.|||+|+|+..++.++.. ...|+|+|+++.. .+. ++.+.++|......
T Consensus 247 ~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~-- 324 (544)
T 3khk_A 247 RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQ-- 324 (544)
T ss_dssp EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCS--
T ss_pred eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCcc--
Confidence 8999999999998887665421 3589999999721 121 23235677554220
Q ss_pred HHHHHHhhccCCcccEEEeCCCCCCCCCchhHHhH-------------------HhHHHHHHHHHHHhhcccCcEEEEEE
Q 003302 99 RVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMS-------------------QNALVIDSVKLATQFLAPKGTFVTKV 159 (832)
Q Consensus 99 ~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~-------------------q~~L~~~aLk~A~~~LkpGG~fV~KV 159 (832)
.....||+|++||+.+.. .|..+... ........+..+..+|+|||++++-+
T Consensus 325 --------~~~~~fD~Iv~NPPf~~~-~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVl 395 (544)
T 3khk_A 325 --------HPDLRADFVMTNPPFNMK-DWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLL 395 (544)
T ss_dssp --------CTTCCEEEEEECCCSSCC-SCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEE
T ss_pred --------cccccccEEEECCCcCCc-cccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEe
Confidence 112678999999875431 23221100 00011246778899999999988754
No 272
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=97.71 E-value=8.3e-05 Score=82.76 Aligned_cols=69 Identities=12% Similarity=0.070 Sum_probs=51.6
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCC-------------------------------------CCCEEEEEeCCCCC----
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVP-------------------------------------VGSLVLGLDLVPIA---- 79 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p-------------------------------------~~~~ViGVDLsp~~---- 79 (832)
.++..|||+|||+|+++..++.... ....|+|+|+++-.
T Consensus 194 ~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~A 273 (385)
T 3ldu_A 194 KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIA 273 (385)
T ss_dssp CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHH
Confidence 5678999999999999988876532 12579999999721
Q ss_pred -------CCC-CceEEEccCCChhHHHHHHHHHhhccCCcccEEEeCCCC
Q 003302 80 -------PIR-GAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121 (832)
Q Consensus 80 -------~i~-~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsDgap 121 (832)
.+. .+.+.++|+.+... ...||+|++|++.
T Consensus 274 r~Na~~~gl~~~i~~~~~D~~~l~~------------~~~~D~Iv~NPPy 311 (385)
T 3ldu_A 274 RENAEIAGVDEYIEFNVGDATQFKS------------EDEFGFIITNPPY 311 (385)
T ss_dssp HHHHHHHTCGGGEEEEECCGGGCCC------------SCBSCEEEECCCC
T ss_pred HHHHHHcCCCCceEEEECChhhcCc------------CCCCcEEEECCCC
Confidence 233 58899999887431 1568999999863
No 273
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=97.66 E-value=9.8e-05 Score=82.43 Aligned_cols=69 Identities=10% Similarity=0.015 Sum_probs=51.4
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCC-------------------------------------CCEEEEEeCCCC-----
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPV-------------------------------------GSLVLGLDLVPI----- 78 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~-------------------------------------~~~ViGVDLsp~----- 78 (832)
.++..|||+|||+|.++..++..... ...|+|+|+++.
T Consensus 200 ~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~A 279 (393)
T 3k0b_A 200 HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIA 279 (393)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHH
Confidence 56789999999999999887765321 146999999972
Q ss_pred ------CCCC-CceEEEccCCChhHHHHHHHHHhhccCCcccEEEeCCCC
Q 003302 79 ------APIR-GAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121 (832)
Q Consensus 79 ------~~i~-~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsDgap 121 (832)
..+. .+.++++|+.+... ...||+|++|++.
T Consensus 280 r~Na~~~gl~~~I~~~~~D~~~~~~------------~~~fD~Iv~NPPY 317 (393)
T 3k0b_A 280 KQNAVEAGLGDLITFRQLQVADFQT------------EDEYGVVVANPPY 317 (393)
T ss_dssp HHHHHHTTCTTCSEEEECCGGGCCC------------CCCSCEEEECCCC
T ss_pred HHHHHHcCCCCceEEEECChHhCCC------------CCCCCEEEECCCC
Confidence 1343 48899999987431 1568999999863
No 274
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.66 E-value=0.00018 Score=78.63 Aligned_cols=74 Identities=16% Similarity=0.167 Sum_probs=56.5
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-------CCCCceEEEccCCChhHHHHHHHHHhhccC-Cc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-------PIRGAVSLEQDITKPECRARVKKVMEEHGV-RA 111 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~-~~ 111 (832)
+.+|.++||.+||.||.+..++..+++.++|+|+|.++.. ...+++++++++.+.. ..+..... +.
T Consensus 55 i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~rL~~~Rv~lv~~nF~~l~------~~L~~~g~~~~ 128 (347)
T 3tka_A 55 IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSALG------EYVAERDLIGK 128 (347)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHTTCCCTTEEEEESCGGGHH------HHHHHTTCTTC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhhcCCcEEEEeCCHHHHH------HHHHhcCCCCc
Confidence 4689999999999999999999998888999999999721 1246889999988743 22322211 25
Q ss_pred ccEEEeCC
Q 003302 112 FDLVLHDG 119 (832)
Q Consensus 112 FDlVlsDg 119 (832)
||.|+.|.
T Consensus 129 vDgILfDL 136 (347)
T 3tka_A 129 IDGILLDL 136 (347)
T ss_dssp EEEEEEEC
T ss_pred ccEEEECC
Confidence 79999885
No 275
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=97.61 E-value=0.00011 Score=81.89 Aligned_cols=69 Identities=7% Similarity=-0.018 Sum_probs=51.4
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCC-------------------------------------CCEEEEEeCCCC-----
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPV-------------------------------------GSLVLGLDLVPI----- 78 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~-------------------------------------~~~ViGVDLsp~----- 78 (832)
.++..|||+|||+|+++..++..... ...|+|+|+++.
T Consensus 193 ~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~A 272 (384)
T 3ldg_A 193 FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIA 272 (384)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHH
Confidence 56789999999999999887764321 146999999972
Q ss_pred ------CCCC-CceEEEccCCChhHHHHHHHHHhhccCCcccEEEeCCCC
Q 003302 79 ------APIR-GAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121 (832)
Q Consensus 79 ------~~i~-~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsDgap 121 (832)
..+. .+.++++|+++... ...||+|++|++.
T Consensus 273 r~Na~~~gl~~~I~~~~~D~~~l~~------------~~~fD~Iv~NPPY 310 (384)
T 3ldg_A 273 RKNAREVGLEDVVKLKQMRLQDFKT------------NKINGVLISNPPY 310 (384)
T ss_dssp HHHHHHTTCTTTEEEEECCGGGCCC------------CCCSCEEEECCCC
T ss_pred HHHHHHcCCCCceEEEECChHHCCc------------cCCcCEEEECCch
Confidence 1344 38899999987431 1468999999864
No 276
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=97.52 E-value=8.8e-05 Score=78.84 Aligned_cols=70 Identities=13% Similarity=0.030 Sum_probs=53.2
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCC-CC-------CCCCceEEEccCCChhHHHHHHHHHhhccCCc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVP-IA-------PIRGAVSLEQDITKPECRARVKKVMEEHGVRA 111 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp-~~-------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~ 111 (832)
+.++ +|||+|||+|.++..++... +.|+|||+++ +. ...++.++++|+..... .. ...
T Consensus 45 ~~~~-~VLEIG~G~G~lt~~L~~~~---~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~--------~~--~~~ 110 (271)
T 3fut_A 45 PFTG-PVFEVGPGLGALTRALLEAG---AEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPW--------EE--VPQ 110 (271)
T ss_dssp CCCS-CEEEECCTTSHHHHHHHHTT---CCEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCG--------GG--SCT
T ss_pred CCCC-eEEEEeCchHHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcCCCCEEEEECChhhCCh--------hh--ccC
Confidence 3567 99999999999999999873 5899999997 21 22469999999987532 11 125
Q ss_pred ccEEEeCCCCCC
Q 003302 112 FDLVLHDGSPNV 123 (832)
Q Consensus 112 FDlVlsDgapnv 123 (832)
||+|++|.+.+.
T Consensus 111 ~~~iv~NlPy~i 122 (271)
T 3fut_A 111 GSLLVANLPYHI 122 (271)
T ss_dssp TEEEEEEECSSC
T ss_pred ccEEEecCcccc
Confidence 699999986554
No 277
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.50 E-value=0.00041 Score=74.58 Aligned_cols=143 Identities=11% Similarity=0.093 Sum_probs=94.8
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC----------------CCCCceEEEccCCChhHHHHHHHHH
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA----------------PIRGAVSLEQDITKPECRARVKKVM 104 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~----------------~i~~V~~i~gDIt~~~~~~~l~~~L 104 (832)
....+||=||.|.|+.+..++++.+ ...|+.|||.+.. .-|++.++.+|.... +
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~-v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~---------l 151 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKN-VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNF---------V 151 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTT-CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTT---------T
T ss_pred CCCCeEEEECCCchHHHHHHHHcCC-cceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHH---------H
Confidence 4457899999999999998888755 4589999999731 136799999998763 2
Q ss_pred hhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcC----CCCHHHHHHHHHHcccceE
Q 003302 105 EEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFR----SQDYSSVLYCLKQLFEKVE 180 (832)
Q Consensus 105 ~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFr----s~d~~~ll~~L~~~F~~V~ 180 (832)
.. ....||+|+.|..-..+..... + ....+..+.+.|+|||.||+-.-. ...+..++..++..|..|.
T Consensus 152 ~~-~~~~yDvIi~D~~dp~~~~~~L--~-----t~eFy~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~~~~~l~~~F~~v~ 223 (294)
T 3o4f_A 152 NQ-TSQTFDVIISDCTDPIGPGESL--F-----TSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVG 223 (294)
T ss_dssp SC-SSCCEEEEEESCCCCCCTTCCS--S-----CCHHHHHHHHTEEEEEEEEEEEEESSSCCHHHHHHHHHHHHHCSEEE
T ss_pred hh-ccccCCEEEEeCCCcCCCchhh--c-----CHHHHHHHHHHhCCCCEEEEecCCcccChHHHHHHHHHHHhhCCcee
Confidence 22 2268999999974222211110 1 123456788999999999985322 2234455666778898887
Q ss_pred EecC-CCCCCCCcceeEEEeec
Q 003302 181 VDKP-AASRSASAEIYLLGIKY 201 (832)
Q Consensus 181 ~~KP-~sSR~~SaEiyvVc~gf 201 (832)
.+.. +-+-++..-.|++|..-
T Consensus 224 ~~~~~vPty~~g~w~f~~as~~ 245 (294)
T 3o4f_A 224 FYQAAIPTYYGGIMTFAWATDN 245 (294)
T ss_dssp EEEECCTTSSSSCEEEEEEESC
T ss_pred eeeeeeccCCCcceeheeEECC
Confidence 6532 33344555567777643
No 278
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.49 E-value=2.5e-05 Score=76.01 Aligned_cols=83 Identities=13% Similarity=0.187 Sum_probs=54.8
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCC-CC------CCCCceEEEccCCChhHHHHHHHHHhhccCCcc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVP-IA------PIRGAVSLEQDITKPECRARVKKVMEEHGVRAF 112 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp-~~------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~F 112 (832)
+.+|.+|||||||+.+ ||+++ |. ...++.++++|+.++.. .....+.|
T Consensus 10 ~~~g~~vL~~~~g~v~-----------------vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~--------~~~~~~~f 64 (176)
T 2ld4_A 10 ISAGQFVAVVWDKSSP-----------------VEALKGLVDKLQALTGNEGRVSVENIKQLLQ--------SAHKESSF 64 (176)
T ss_dssp CCTTSEEEEEECTTSC-----------------HHHHHHHHHHHHHHTTTTSEEEEEEGGGGGG--------GCCCSSCE
T ss_pred CCCCCEEEEecCCcee-----------------eeCCHHHHHHHHHhcccCcEEEEechhcCcc--------ccCCCCCE
Confidence 5789999999999743 34433 10 01248889999987531 00012679
Q ss_pred cEEEeCCCCCCCCCch-hHHhHHhHHHHHHHHHHHhhcccCcEEEEE
Q 003302 113 DLVLHDGSPNVGGAWA-QEAMSQNALVIDSVKLATQFLAPKGTFVTK 158 (832)
Q Consensus 113 DlVlsDgapnv~g~w~-~D~~~q~~L~~~aLk~A~~~LkpGG~fV~K 158 (832)
|+|++..... |. .+. ..+|+.+.++|+|||+|++.
T Consensus 65 D~V~~~~~l~----~~~~~~-------~~~l~~~~r~LkpgG~l~~~ 100 (176)
T 2ld4_A 65 DIILSGLVPG----STTLHS-------AEILAEIARILRPGGCLFLK 100 (176)
T ss_dssp EEEEECCSTT----CCCCCC-------HHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEECChhh----hcccCH-------HHHHHHHHHHCCCCEEEEEE
Confidence 9999975432 22 221 35778899999999999984
No 279
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.49 E-value=0.00011 Score=77.47 Aligned_cols=114 Identities=19% Similarity=0.227 Sum_probs=71.1
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHh-------CCC----CCEEEEEeCCCCC-----------------------C------
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQR-------VPV----GSLVLGLDLVPIA-----------------------P------ 80 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~-------~p~----~~~ViGVDLsp~~-----------------------~------ 80 (832)
.++.+||++|+|+|.-+.+++.. .|. ...|++|+..|+. .
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 35578999999999987776554 442 2489999998831 0
Q ss_pred ------C----CCceEEEccCCChhHHHHHHHHHhhcc---CCcccEEEeCCC-CCC-CCCchhHHhHHhHHHHHHHHHH
Q 003302 81 ------I----RGAVSLEQDITKPECRARVKKVMEEHG---VRAFDLVLHDGS-PNV-GGAWAQEAMSQNALVIDSVKLA 145 (832)
Q Consensus 81 ------i----~~V~~i~gDIt~~~~~~~l~~~L~~~~---~~~FDlVlsDga-pnv-~g~w~~D~~~q~~L~~~aLk~A 145 (832)
+ .++..+.+|+.+. +.... ...||+|+.||. |.. ...|.. ..|..+
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~---------l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~----------~~l~~l 199 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINEL---------ISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQ----------NLFNAM 199 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHH---------GGGSCGGGTTCEEEEEECSSCTTTCGGGCCH----------HHHHHH
T ss_pred chhheeccCCceEEEEEECcHHHH---------HhhcccccCCeEEEEEECCCCcccChhhcCH----------HHHHHH
Confidence 1 1244567776541 22211 136899999973 321 112443 345678
Q ss_pred HhhcccCcEEEEEEcCCCCHHHHHHHHHHc-cc
Q 003302 146 TQFLAPKGTFVTKVFRSQDYSSVLYCLKQL-FE 177 (832)
Q Consensus 146 ~~~LkpGG~fV~KVFrs~d~~~ll~~L~~~-F~ 177 (832)
.++|+|||+|++ |... ..+...|... |.
T Consensus 200 ~~~L~pGG~l~t--ysaa--~~vrr~L~~aGF~ 228 (257)
T 2qy6_A 200 ARLARPGGTLAT--FTSA--GFVRRGLQEAGFT 228 (257)
T ss_dssp HHHEEEEEEEEE--SCCB--HHHHHHHHHHTEE
T ss_pred HHHcCCCcEEEE--EeCC--HHHHHHHHHCCCE
Confidence 899999999995 5543 3455555554 65
No 280
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.45 E-value=0.0005 Score=79.62 Aligned_cols=110 Identities=15% Similarity=0.170 Sum_probs=64.6
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCC------------CCEEEEEeCCCCC-----------CCCCceEEEccCCChhHH
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPV------------GSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECR 97 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~------------~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~ 97 (832)
.++.+|+|-|||+|+|...+..++.. ...++|+|+++.. .+....+.++|....+..
T Consensus 216 ~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~~~dtL~~~~~ 295 (530)
T 3ufb_A 216 QLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENSLRFPLR 295 (530)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEEECSCTTCSCGG
T ss_pred CCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCccccccccccccCchh
Confidence 56789999999999998877765432 2369999999621 233334566776543211
Q ss_pred HHHHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHH-------hHHHHHHHHHHHhhcc-------cCcEEEEEE
Q 003302 98 ARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQ-------NALVIDSVKLATQFLA-------PKGTFVTKV 159 (832)
Q Consensus 98 ~~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q-------~~L~~~aLk~A~~~Lk-------pGG~fV~KV 159 (832)
.......||+|++||+++ +.|..+.... .......+..+...|+ |||++++-+
T Consensus 296 -------~~~~~~~fD~Il~NPPf~--~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVl 362 (530)
T 3ufb_A 296 -------EMGDKDRVDVILTNPPFG--GEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVV 362 (530)
T ss_dssp -------GCCGGGCBSEEEECCCSS--CBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEE
T ss_pred -------hhcccccceEEEecCCCC--ccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEe
Confidence 111125689999998753 3333222110 0011123344555554 799998854
No 281
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.44 E-value=5.6e-05 Score=79.86 Aligned_cols=68 Identities=16% Similarity=0.103 Sum_probs=50.8
Q ss_pred CCC--CEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC---------------C----C-CCceEEEccCCChhHHH
Q 003302 41 RSS--HAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA---------------P----I-RGAVSLEQDITKPECRA 98 (832)
Q Consensus 41 ~~g--~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~---------------~----i-~~V~~i~gDIt~~~~~~ 98 (832)
.++ .+|||+|||+|..+..++.+ ++.|+|||+++.. . + .++.++++|..+.
T Consensus 85 ~~g~~~~VLDl~~G~G~dal~lA~~---g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~---- 157 (258)
T 2oyr_A 85 KGDYLPDVVDATAGLGRDAFVLASV---GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTA---- 157 (258)
T ss_dssp BTTBCCCEEETTCTTCHHHHHHHHH---TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHH----
T ss_pred cCCCCCEEEEcCCcCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHH----
Confidence 456 89999999999999999987 4579999999820 1 2 3578889987642
Q ss_pred HHHHHHhhccCCcccEEEeCCCC
Q 003302 99 RVKKVMEEHGVRAFDLVLHDGSP 121 (832)
Q Consensus 99 ~l~~~L~~~~~~~FDlVlsDgap 121 (832)
+.... ..||+|++|++.
T Consensus 158 -----L~~~~-~~fDvV~lDP~y 174 (258)
T 2oyr_A 158 -----LTDIT-PRPQVVYLDPMF 174 (258)
T ss_dssp -----STTCS-SCCSEEEECCCC
T ss_pred -----HHhCc-ccCCEEEEcCCC
Confidence 22111 368999999864
No 282
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.44 E-value=4e-05 Score=80.80 Aligned_cols=71 Identities=15% Similarity=0.025 Sum_probs=51.2
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCC-------CC-----------CCCC-ceEEEccCCChhHHHHHH
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVP-------IA-----------PIRG-AVSLEQDITKPECRARVK 101 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp-------~~-----------~i~~-V~~i~gDIt~~~~~~~l~ 101 (832)
.++.+|||||||+|.++..++.. ++.|+|||+++ .. .+.+ +.++++|+.+..
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~---g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l------ 152 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASL---GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQM------ 152 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHT---TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHH------
T ss_pred CCcCeEEEeeCccCHHHHHHHHh---CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHH------
Confidence 46789999999999999999986 46899999998 21 1223 889999986531
Q ss_pred HHHhhccCCcccEEEeCCCC
Q 003302 102 KVMEEHGVRAFDLVLHDGSP 121 (832)
Q Consensus 102 ~~L~~~~~~~FDlVlsDgap 121 (832)
..+.... ..||+|++|++.
T Consensus 153 ~~~~~~~-~~fD~V~~dP~~ 171 (258)
T 2r6z_A 153 PALVKTQ-GKPDIVYLDPMY 171 (258)
T ss_dssp HHHHHHH-CCCSEEEECCCC
T ss_pred HhhhccC-CCccEEEECCCC
Confidence 1111100 467999999753
No 283
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=97.43 E-value=8.8e-05 Score=78.56 Aligned_cols=106 Identities=12% Similarity=0.045 Sum_probs=70.1
Q ss_pred HHHhhhhhcC----CCCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCC-CC---------CCCCceEEEccCCCh
Q 003302 29 KLVQLDSKFS----FLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVP-IA---------PIRGAVSLEQDITKP 94 (832)
Q Consensus 29 KLiqi~~kf~----fl~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp-~~---------~i~~V~~i~gDIt~~ 94 (832)
.|.-++.-|. .+.+..+|||||||+|-++..++...| ...|+|+|+++ +. .-.+..+.+.|....
T Consensus 115 RLp~lD~fY~~i~~~i~~p~~VLDLGCG~GpLAl~~~~~~p-~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~ 193 (281)
T 3lcv_B 115 RLPHLDEFYRELFRHLPRPNTLRDLACGLNPLAAPWMGLPA-ETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLED 193 (281)
T ss_dssp HGGGHHHHHHHHGGGSCCCSEEEETTCTTGGGCCTTTTCCT-TCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTS
T ss_pred HhHhHHHHHHHHHhccCCCceeeeeccCccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeeccc
Confidence 3444444444 345678999999999999988877544 78999999996 21 112366778887653
Q ss_pred hHHHHHHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 95 ECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 95 ~~~~~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
. +.+.||+||+.-. ....+.... ..++ ..+..|+|||.||.
T Consensus 194 ~------------p~~~~DvaL~lkt-----i~~Le~q~k----g~g~-~ll~aL~~~~vvVS 234 (281)
T 3lcv_B 194 R------------LDEPADVTLLLKT-----LPCLETQQR----GSGW-EVIDIVNSPNIVVT 234 (281)
T ss_dssp C------------CCSCCSEEEETTC-----HHHHHHHST----THHH-HHHHHSSCSEEEEE
T ss_pred C------------CCCCcchHHHHHH-----HHHhhhhhh----HHHH-HHHHHhCCCCEEEe
Confidence 2 2378899998642 122222111 1233 57889999999996
No 284
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=97.40 E-value=0.00014 Score=76.18 Aligned_cols=91 Identities=19% Similarity=0.004 Sum_probs=62.4
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCC-CC---------CCCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVP-IA---------PIRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp-~~---------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
.+..+|||||||.|-++..+. +...|+|+|+++ +. .-+.+.+..+|..... ..+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~------------~~~ 167 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER----GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAP------------PAE 167 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT----TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSC------------CCC
T ss_pred CCCCeEEEecCCccHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCC------------CCC
Confidence 567899999999999887665 467999999997 21 1245677888887643 226
Q ss_pred cccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 111 AFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 111 ~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
.||+|++.-. .+..++... .++-.++..|+++|.||.
T Consensus 168 ~~DvvLllk~-----lh~LE~q~~-----~~~~~ll~aL~~~~vvVs 204 (253)
T 3frh_A 168 AGDLALIFKL-----LPLLEREQA-----GSAMALLQSLNTPRMAVS 204 (253)
T ss_dssp BCSEEEEESC-----HHHHHHHST-----THHHHHHHHCBCSEEEEE
T ss_pred CcchHHHHHH-----HHHhhhhch-----hhHHHHHHHhcCCCEEEE
Confidence 7899988632 223333222 122256679999999885
No 285
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.36 E-value=0.00099 Score=64.60 Aligned_cols=91 Identities=14% Similarity=0.140 Sum_probs=63.8
Q ss_pred CCCCEEEEEcCCcC-HHHHHHHHhCCCCCEEEEEeCCCCCCCCCceEEEccCCChhHHHHHHHHHhhccCCcccEE-EeC
Q 003302 41 RSSHAVLDLCAAPG-GWMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV-LHD 118 (832)
Q Consensus 41 ~~g~~VLDLGcGPG-g~sq~La~~~p~~~~ViGVDLsp~~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlV-lsD 118 (832)
.++.+||++|||+| ..+.+|+... +..|+|+|++|..-. +++.|++++... .. ..||+| ..+
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~--g~~V~atDInp~Av~----~v~dDiF~P~~~-----~Y-----~~~DLIYsir 97 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHS--KVDLVLTDIKPSHGG----IVRDDITSPRME-----IY-----RGAALIYSIR 97 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHS--CCEEEEECSSCSSTT----EECCCSSSCCHH-----HH-----TTEEEEEEES
T ss_pred CCCCcEEEEccCCChHHHHHHHHhC--CCeEEEEECCccccc----eEEccCCCCccc-----cc-----CCcCEEEEcC
Confidence 45679999999999 5899998753 568999999985422 899999986421 11 467999 555
Q ss_pred CCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCC
Q 003302 119 GSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQD 164 (832)
Q Consensus 119 gapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d 164 (832)
+++. |+..++.+|..+ |..|+++.+....
T Consensus 98 PP~E--------------l~~~i~~lA~~v---~adliI~pL~~E~ 126 (153)
T 2k4m_A 98 PPAE--------------IHSSLMRVADAV---GARLIIKPLTGED 126 (153)
T ss_dssp CCTT--------------THHHHHHHHHHH---TCEEEEECBTTBC
T ss_pred CCHH--------------HHHHHHHHHHHc---CCCEEEEcCCCCc
Confidence 5432 234455556544 8889987766554
No 286
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=97.33 E-value=0.00071 Score=70.81 Aligned_cols=95 Identities=16% Similarity=0.228 Sum_probs=69.3
Q ss_pred CcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCC--HHHHHHHHHHcccceEEecCCCC
Q 003302 110 RAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQD--YSSVLYCLKQLFEKVEVDKPAAS 187 (832)
Q Consensus 110 ~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d--~~~ll~~L~~~F~~V~~~KP~sS 187 (832)
++||+|++|..--+--++.++.......+..+-..|++.|+|||+|+++-+.--+ ...++..+.+.|..+.+.+|...
T Consensus 210 grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyADR~SE~vV~alARkF~~~rv~~P~cv 289 (324)
T 3trk_A 210 GRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYADRTSERVICVLGRKFRSSRALKPPCV 289 (324)
T ss_dssp CCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTEEEEEEECCTTC
T ss_pred CceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeecccccchHHHHHHHHhhheeeeeecCccc
Confidence 8899999997533333333332222233345556789999999999999886544 56788999999999999999544
Q ss_pred CCCCcceeEEEeeccCCC
Q 003302 188 RSASAEIYLLGIKYKAPA 205 (832)
Q Consensus 188 R~~SaEiyvVc~gfk~p~ 205 (832)
- ++-|+|+|..+|-++.
T Consensus 290 ~-snTEv~~vF~~~Dng~ 306 (324)
T 3trk_A 290 T-SNTEMFFLFSNFDNGR 306 (324)
T ss_dssp C-BTTCEEEEEEEECCCC
T ss_pred c-ccceEEEEEEeccCCc
Confidence 4 3779999999998854
No 287
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.32 E-value=0.00016 Score=76.18 Aligned_cols=70 Identities=6% Similarity=0.112 Sum_probs=51.7
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCC-CC--------CCCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVP-IA--------PIRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp-~~--------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
+.++.+|||+|||+|.++..++.. ++.|+|||+++ +. ..+++.++++|+....... .+. .+
T Consensus 27 ~~~~~~VLEIG~G~G~lt~~La~~---~~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~~~----~~~---~~ 96 (255)
T 3tqs_A 27 PQKTDTLVEIGPGRGALTDYLLTE---CDNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFDFSS----VKT---DK 96 (255)
T ss_dssp CCTTCEEEEECCTTTTTHHHHTTT---SSEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCCGGG----SCC---SS
T ss_pred CCCcCEEEEEcccccHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCCHHH----hcc---CC
Confidence 357889999999999999999876 36999999997 21 2468999999998864211 000 14
Q ss_pred cccEEEeCCC
Q 003302 111 AFDLVLHDGS 120 (832)
Q Consensus 111 ~FDlVlsDga 120 (832)
.|| |++|.+
T Consensus 97 ~~~-vv~NlP 105 (255)
T 3tqs_A 97 PLR-VVGNLP 105 (255)
T ss_dssp CEE-EEEECC
T ss_pred CeE-EEecCC
Confidence 577 777764
No 288
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.30 E-value=9.4e-05 Score=87.19 Aligned_cols=93 Identities=16% Similarity=0.162 Sum_probs=63.6
Q ss_pred CCEEEEEcCCcCHH---HHHHHHhCCCCCEEEEEeCCCCC----------CCC-CceEEEccCCChhHHHHHHHHHhhcc
Q 003302 43 SHAVLDLCAAPGGW---MQVAVQRVPVGSLVLGLDLVPIA----------PIR-GAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 43 g~~VLDLGcGPGg~---sq~La~~~p~~~~ViGVDLsp~~----------~i~-~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
+.+|||+|||+|-+ +..+++......+|+||+-+|++ ... .|+++++|+++... +
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~~~v~~N~~~dkVtVI~gd~eev~L--------P--- 426 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVA--------P--- 426 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHHHHHHHHTTGGGEEEEESCTTTCCC--------S---
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHHHHhccCCCeEEEEeCcceeccC--------C---
Confidence 45899999999988 55555554444479999999864 122 38999999998642 1
Q ss_pred CCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEE
Q 003302 109 VRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFV 156 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV 156 (832)
.++|+|+|--. |..-..+ +...+|..+-++|+|||.++
T Consensus 427 -EKVDIIVSEwM---G~fLl~E------~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 427 -EKADIIVSELL---GSFADNE------LSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp -SCEEEEECCCC---BTTBGGG------CHHHHHHHHGGGEEEEEEEE
T ss_pred -cccCEEEEEcC---ccccccc------CCHHHHHHHHHhcCCCcEEc
Confidence 56799999753 1111111 11234556778999999986
No 289
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.26 E-value=0.0011 Score=67.60 Aligned_cols=109 Identities=18% Similarity=0.168 Sum_probs=65.3
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----------CC---CCCceEEEccCCCh------------
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----------AP---IRGAVSLEQDITKP------------ 94 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----------~~---i~~V~~i~gDIt~~------------ 94 (832)
.+..+||++|| |+-+.+++. ++ +++|+.||.++- .. ..+|.++.+|+...
T Consensus 29 ~~a~~VLEiGt--GySTl~lA~-~~-~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~ 104 (202)
T 3cvo_A 29 EEAEVILEYGS--GGSTVVAAE-LP-GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKW 104 (202)
T ss_dssp HHCSEEEEESC--SHHHHHHHT-ST-TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTG
T ss_pred hCCCEEEEECc--hHHHHHHHH-cC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhh
Confidence 45789999998 455555665 44 789999999962 12 23588889997542
Q ss_pred hHHHHHHHHH-hhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEE-EcCCCCHHHHH
Q 003302 95 ECRARVKKVM-EEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTK-VFRSQDYSSVL 169 (832)
Q Consensus 95 ~~~~~l~~~L-~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~K-VFrs~d~~~ll 169 (832)
.....+...+ .....++||+|+.||... . ..+..+...|+|||.+|+- +.....|..+.
T Consensus 105 ~~l~~~~~~i~~~~~~~~fDlIfIDg~k~------~----------~~~~~~l~~l~~GG~Iv~DNv~~r~~y~~v~ 165 (202)
T 3cvo_A 105 RSYPDYPLAVWRTEGFRHPDVVLVDGRFR------V----------GCALATAFSITRPVTLLFDDYSQRRWQHQVE 165 (202)
T ss_dssp GGTTHHHHGGGGCTTCCCCSEEEECSSSH------H----------HHHHHHHHHCSSCEEEEETTGGGCSSGGGGH
T ss_pred hhHHHHhhhhhccccCCCCCEEEEeCCCc------h----------hHHHHHHHhcCCCeEEEEeCCcCCcchHHHH
Confidence 1011111111 111126799999998521 1 1123466899999999873 23334555443
No 290
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.25 E-value=0.0006 Score=75.64 Aligned_cols=130 Identities=20% Similarity=0.189 Sum_probs=79.7
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC--------C-----------CCCceEEEccCCChhHHHHHHH
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA--------P-----------IRGAVSLEQDITKPECRARVKK 102 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~--------~-----------i~~V~~i~gDIt~~~~~~~l~~ 102 (832)
+..+||=||.|-|+.+..+.++ ++ ..|+.|||.+.. + .+++.++.+|.... +..
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh-~~-~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~f-----l~~ 277 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKL-KP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPV-----LKR 277 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-CC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHH-----HHH
T ss_pred CCCeEEEECCCcHHHHHHHHhc-CC-ceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHH-----HHh
Confidence 4579999999999999988876 43 689999999621 1 13467777776542 222
Q ss_pred HHhhccCCcccEEEeCCCCC-CCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCC---CHHHHHHHHHHcccc
Q 003302 103 VMEEHGVRAFDLVLHDGSPN-VGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQ---DYSSVLYCLKQLFEK 178 (832)
Q Consensus 103 ~L~~~~~~~FDlVlsDgapn-v~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~---d~~~ll~~L~~~F~~ 178 (832)
.... ...||+|+.|.... .++..... .........+..+.+.|+|||.||+..-... .+..+...|+..|..
T Consensus 278 ~~~~--~~~yDvIIvDl~D~~~s~~p~g~--a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~~~~~~~i~~tl~~vF~~ 353 (381)
T 3c6k_A 278 YAKE--GREFDYVINDLTAVPISTSPEED--STWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRLYCP 353 (381)
T ss_dssp HHHH--TCCEEEEEEECCSSCCCCC------CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTSSSC
T ss_pred hhhc--cCceeEEEECCCCCcccCcccCc--chHHHHHHHHHHHHHhcCCCCEEEEecCCCcchhHHHHHHHHHHHhCCc
Confidence 2221 15789999996321 11111111 1111234567889999999999998432222 233444556677777
Q ss_pred eEEe
Q 003302 179 VEVD 182 (832)
Q Consensus 179 V~~~ 182 (832)
|...
T Consensus 354 v~~~ 357 (381)
T 3c6k_A 354 VEFS 357 (381)
T ss_dssp EEEE
T ss_pred ceEe
Confidence 7554
No 291
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.21 E-value=0.00026 Score=84.75 Aligned_cols=104 Identities=11% Similarity=-0.014 Sum_probs=66.6
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhC---C--------------------------------------CCCEEEEEeCCCCC
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRV---P--------------------------------------VGSLVLGLDLVPIA 79 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~---p--------------------------------------~~~~ViGVDLsp~~ 79 (832)
.++..|||+|||+|+++..++... + ....|+|+|+++..
T Consensus 189 ~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~a 268 (703)
T 3v97_A 189 QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARV 268 (703)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHH
T ss_pred CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHH
Confidence 467899999999999998877642 0 12579999999721
Q ss_pred -----------CCCC-ceEEEccCCChhHHHHHHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHh
Q 003302 80 -----------PIRG-AVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQ 147 (832)
Q Consensus 80 -----------~i~~-V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~ 147 (832)
.+.+ +.+.++|+.+... ....+.||+|++||+.. ... .+... ..-+...|...++
T Consensus 269 v~~A~~N~~~agv~~~i~~~~~D~~~~~~---------~~~~~~~d~Iv~NPPYG--~Rl-g~~~~-l~~ly~~l~~~lk 335 (703)
T 3v97_A 269 IQRARTNARLAGIGELITFEVKDVAQLTN---------PLPKGPYGTVLSNPPYG--ERL-DSEPA-LIALHSLLGRIMK 335 (703)
T ss_dssp HHHHHHHHHHTTCGGGEEEEECCGGGCCC---------SCTTCCCCEEEECCCCC--C----CCHH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCceEEEECChhhCcc---------ccccCCCCEEEeCCCcc--ccc-cchhH-HHHHHHHHHHHHH
Confidence 2333 7889999876421 00013689999998642 111 11111 1112345666777
Q ss_pred hcccCcEEEE
Q 003302 148 FLAPKGTFVT 157 (832)
Q Consensus 148 ~LkpGG~fV~ 157 (832)
.+.|||.+++
T Consensus 336 ~~~~g~~~~i 345 (703)
T 3v97_A 336 NQFGGWNLSL 345 (703)
T ss_dssp HHCTTCEEEE
T ss_pred hhCCCCeEEE
Confidence 7789999987
No 292
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.20 E-value=0.00093 Score=74.18 Aligned_cols=112 Identities=13% Similarity=0.061 Sum_probs=64.0
Q ss_pred CCCEEEEEcCCcCHHHHHHH--------HhC------CCCCEEEEEeCCCCC------CCC-----------------Cc
Q 003302 42 SSHAVLDLCAAPGGWMQVAV--------QRV------PVGSLVLGLDLVPIA------PIR-----------------GA 84 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La--------~~~------p~~~~ViGVDLsp~~------~i~-----------------~V 84 (832)
.+.+|+|||||+|..+..+. ..+ ++.-.|+..||-... .++ +-
T Consensus 52 ~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~ 131 (374)
T 3b5i_A 52 PPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRS 131 (374)
T ss_dssp CCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBC
T ss_pred CceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCc
Confidence 36889999999999988762 222 245688888886532 011 11
Q ss_pred eEEEccCCChhHHHHHHHHHhhccCCcccEEEeCCCCCCCCC------------chhH-------------Hh-HHh-HH
Q 003302 85 VSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA------------WAQE-------------AM-SQN-AL 137 (832)
Q Consensus 85 ~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsDgapnv~g~------------w~~D-------------~~-~q~-~L 137 (832)
.|+.+.-.+...+ .++ .++||+|+|+.+..+-.. |+.. +| .|. .-
T Consensus 132 ~f~~gvpgSFy~r-----lfP---~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D 203 (374)
T 3b5i_A 132 YFVAGVPGSFYRR-----LFP---ARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQAD 203 (374)
T ss_dssp SEEEEEESCTTSC-----CSC---TTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHH
T ss_pred eEEEecChhhhcc-----cCC---CcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHH
Confidence 2333322221100 122 278899999976443110 1000 11 111 11
Q ss_pred HHHHHHHHHhhcccCcEEEEEEcC
Q 003302 138 VIDSVKLATQFLAPKGTFVTKVFR 161 (832)
Q Consensus 138 ~~~aLk~A~~~LkpGG~fV~KVFr 161 (832)
....|+...+.|+|||.||+.+..
T Consensus 204 ~~~fL~~ra~eL~pGG~mvl~~~g 227 (374)
T 3b5i_A 204 LAEFLRARAAEVKRGGAMFLVCLG 227 (374)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHhCCCCEEEEEEec
Confidence 345688889999999999997763
No 293
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.12 E-value=0.00048 Score=72.05 Aligned_cols=71 Identities=15% Similarity=0.175 Sum_probs=51.6
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCC-C------CCCCCceEEEccCCChhHHHHHHHHHhhccCCcc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVP-I------APIRGAVSLEQDITKPECRARVKKVMEEHGVRAF 112 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp-~------~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~F 112 (832)
+.++.+|||+|||+|.++..++.. + .+.|+|||+++ + ....++.++++|+...... ... ..
T Consensus 29 ~~~~~~VLDiG~G~G~lt~~L~~~-~-~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~~~~~~--------~~~-~~- 96 (249)
T 3ftd_A 29 IEEGNTVVEVGGGTGNLTKVLLQH-P-LKKLYVIELDREMVENLKSIGDERLEVINEDASKFPFC--------SLG-KE- 96 (249)
T ss_dssp CCTTCEEEEEESCHHHHHHHHTTS-C-CSEEEEECCCHHHHHHHTTSCCTTEEEECSCTTTCCGG--------GSC-SS-
T ss_pred CCCcCEEEEEcCchHHHHHHHHHc-C-CCeEEEEECCHHHHHHHHhccCCCeEEEEcchhhCChh--------Hcc-CC-
Confidence 356889999999999999999876 2 46999999996 1 1234689999999875421 111 23
Q ss_pred cEEEeCCCCC
Q 003302 113 DLVLHDGSPN 122 (832)
Q Consensus 113 DlVlsDgapn 122 (832)
.+|++|.+.+
T Consensus 97 ~~vv~NlPy~ 106 (249)
T 3ftd_A 97 LKVVGNLPYN 106 (249)
T ss_dssp EEEEEECCTT
T ss_pred cEEEEECchh
Confidence 3888887643
No 294
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.10 E-value=0.00094 Score=71.32 Aligned_cols=71 Identities=24% Similarity=0.334 Sum_probs=54.7
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC-----CC--CCceEEEccCCChhHHHHHHHHHhhccCCcc
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA-----PI--RGAVSLEQDITKPECRARVKKVMEEHGVRAF 112 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~-----~i--~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~F 112 (832)
+.++.++||++||.||.+..++.. +++|+|+|.+|.. .+ ++++++++|+.++.. .+.......|
T Consensus 20 ~~~gg~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f~~l~~------~L~~~g~~~v 90 (285)
T 1wg8_A 20 VRPGGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKR------HLAALGVERV 90 (285)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHH------HHHHTTCSCE
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHhhccCCEEEEECCcchHHH------HHHHcCCCCc
Confidence 467899999999999999999987 5799999999721 12 579999999987542 2332223568
Q ss_pred cEEEeCC
Q 003302 113 DLVLHDG 119 (832)
Q Consensus 113 DlVlsDg 119 (832)
|.|++|.
T Consensus 91 DgIL~DL 97 (285)
T 1wg8_A 91 DGILADL 97 (285)
T ss_dssp EEEEEEC
T ss_pred CEEEeCC
Confidence 9999985
No 295
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.08 E-value=0.00018 Score=85.15 Aligned_cols=99 Identities=16% Similarity=0.202 Sum_probs=62.5
Q ss_pred CCEEEEEcCCcCHHHHH---HHHhCC---------CCCEEEEEeCCCCC----------CCC-CceEEEccCCChhHHHH
Q 003302 43 SHAVLDLCAAPGGWMQV---AVQRVP---------VGSLVLGLDLVPIA----------PIR-GAVSLEQDITKPECRAR 99 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~---La~~~p---------~~~~ViGVDLsp~~----------~i~-~V~~i~gDIt~~~~~~~ 99 (832)
+.+|||+|||+|.++.. +++..+ ...+|+|||.+++. ... .|+++++|+++.....
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~- 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIA- 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHH-
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhccccc-
Confidence 45899999999999643 222111 23499999999742 233 3999999999865321
Q ss_pred HHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEE
Q 003302 100 VKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFV 156 (832)
Q Consensus 100 l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV 156 (832)
.......+|+|+|--. |..-. .+|....|..+.++|+|||.++
T Consensus 489 -----~~~~~ekVDIIVSElm----Gsfl~-----nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 489 -----KDRGFEQPDIIVSELL----GSFGD-----NELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp -----HHTTCCCCSEEEECCC----BTTBG-----GGSHHHHHHTTGGGSCTTCEEE
T ss_pred -----ccCCCCcccEEEEecc----ccccc-----hhccHHHHHHHHHhCCCCcEEE
Confidence 1111256799999753 11111 1222334445578999999986
No 296
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.08 E-value=0.00032 Score=74.76 Aligned_cols=56 Identities=11% Similarity=0.086 Sum_probs=44.7
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCC-CCEEEEEeCCC-CC-----C-CCCceEEEccCCChh
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPV-GSLVLGLDLVP-IA-----P-IRGAVSLEQDITKPE 95 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~-~~~ViGVDLsp-~~-----~-i~~V~~i~gDIt~~~ 95 (832)
+.++.+|||+|||+|.++..|+...+. ++.|+|||+++ +. . .+++.++++|+....
T Consensus 40 ~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~~~~ 103 (279)
T 3uzu_A 40 PERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDALTFD 103 (279)
T ss_dssp CCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGGGCC
T ss_pred CCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECChhcCC
Confidence 357889999999999999999988543 24599999997 21 1 357899999998754
No 297
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=97.06 E-value=0.0022 Score=73.17 Aligned_cols=95 Identities=22% Similarity=0.316 Sum_probs=70.6
Q ss_pred CcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCC--HHHHHHHHHHcccceEEecCCCC
Q 003302 110 RAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQD--YSSVLYCLKQLFEKVEVDKPAAS 187 (832)
Q Consensus 110 ~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d--~~~ll~~L~~~F~~V~~~KP~sS 187 (832)
++||+|+.|...-+-.++.++-..+.-.+..+-..|+.+|+|||+||++-+.--+ ...++..+.+.|..+.+.+|..+
T Consensus 220 ~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~YGyADr~sE~vv~alaRkF~~~rv~~p~~~ 299 (670)
T 4gua_A 220 ARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKSYGYADRNSEDVVTALARKFVRVSAARPDCV 299 (670)
T ss_dssp CCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCSHHHHHHHHHHHHTEEEEEEECCTTC
T ss_pred CcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEEeeccccchHHHHHHHHhheeeeeeeCCCcc
Confidence 6899999997543333443333333333445567899999999999998886544 46788999999999999999665
Q ss_pred CCCCcceeEEEeeccCCC
Q 003302 188 RSASAEIYLLGIKYKAPA 205 (832)
Q Consensus 188 R~~SaEiyvVc~gfk~p~ 205 (832)
- ++.|+|+|..+|-.+.
T Consensus 300 ~-snTEv~~~f~~~Dn~r 316 (670)
T 4gua_A 300 S-SNTEMYLIFRQLDNSR 316 (670)
T ss_dssp S-BTTCEEEEEEEECCCS
T ss_pred c-cCceEEEEEEecCCCc
Confidence 5 3479999999998754
No 298
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.03 E-value=0.00062 Score=71.42 Aligned_cols=75 Identities=12% Similarity=-0.013 Sum_probs=51.0
Q ss_pred CCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCC-CC--------CCCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVP-IA--------PIRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp-~~--------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
+.++.+|||+|||+|.++. ++ ..+ ...|+|||+++ +. ..+++.++++|+........ +. +. +
T Consensus 19 ~~~~~~VLEIG~G~G~lt~-l~-~~~-~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~~----~~-~~-~ 89 (252)
T 1qyr_A 19 PQKGQAMVEIGPGLAALTE-PV-GER-LDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGEL----AE-KM-G 89 (252)
T ss_dssp CCTTCCEEEECCTTTTTHH-HH-HTT-CSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHHH----HH-HH-T
T ss_pred CCCcCEEEEECCCCcHHHH-hh-hCC-CCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHHHh----hc-cc-C
Confidence 3578899999999999999 65 322 22399999996 21 12479999999987653321 11 00 2
Q ss_pred cccEEEeCCCCCC
Q 003302 111 AFDLVLHDGSPNV 123 (832)
Q Consensus 111 ~FDlVlsDgapnv 123 (832)
..++|++|.+.+.
T Consensus 90 ~~~~vvsNlPY~i 102 (252)
T 1qyr_A 90 QPLRVFGNLPYNI 102 (252)
T ss_dssp SCEEEEEECCTTT
T ss_pred CceEEEECCCCCc
Confidence 3489999986543
No 299
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=96.84 E-value=0.0023 Score=71.24 Aligned_cols=21 Identities=29% Similarity=0.177 Sum_probs=18.2
Q ss_pred CCEEEEEcCCcCHHHHHHHHh
Q 003302 43 SHAVLDLCAAPGGWMQVAVQR 63 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~ 63 (832)
..+|+||||++|..+..+...
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ 73 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRD 73 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHH
T ss_pred ceEEEecCCCCCchHHHHHHH
Confidence 578999999999999877765
No 300
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=96.39 E-value=0.0057 Score=65.37 Aligned_cols=94 Identities=11% Similarity=0.047 Sum_probs=64.8
Q ss_pred CCEEEEEcCCcCHHHHHHHHhCC----CCCEEEEEeCCCCC-------------------------------------CC
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRVP----VGSLVLGLDLVPIA-------------------------------------PI 81 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~p----~~~~ViGVDLsp~~-------------------------------------~i 81 (832)
...||++|++.|+-+.+++..++ .+++|+++|...-. .+
T Consensus 107 pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~gl 186 (282)
T 2wk1_A 107 PGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYDL 186 (282)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTTC
T ss_pred CCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcCC
Confidence 45899999999998888876653 36789999975210 11
Q ss_pred --CCceEEEccCCChhHHHHHHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEE
Q 003302 82 --RGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTK 158 (832)
Q Consensus 82 --~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~K 158 (832)
.+|.++.||+.+ .|.....++||+|+.|+. + ... +...|..+...|+|||.+|+-
T Consensus 187 ~~~~I~li~Gda~e---------tL~~~~~~~~d~vfIDaD------~-y~~------~~~~Le~~~p~L~pGGiIv~D 243 (282)
T 2wk1_A 187 LDEQVRFLPGWFKD---------TLPTAPIDTLAVLRMDGD------L-YES------TWDTLTNLYPKVSVGGYVIVD 243 (282)
T ss_dssp CSTTEEEEESCHHH---------HSTTCCCCCEEEEEECCC------S-HHH------HHHHHHHHGGGEEEEEEEEES
T ss_pred CcCceEEEEeCHHH---------HHhhCCCCCEEEEEEcCC------c-ccc------HHHHHHHHHhhcCCCEEEEEc
Confidence 457788887743 122222267899999963 1 111 235667789999999999873
No 301
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=96.05 E-value=0.0066 Score=67.00 Aligned_cols=112 Identities=14% Similarity=0.063 Sum_probs=65.7
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHh---------------CCCCCEEEEEeCCCCC------CCC------CceEEEccCCC
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQR---------------VPVGSLVLGLDLVPIA------PIR------GAVSLEQDITK 93 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~---------------~p~~~~ViGVDLsp~~------~i~------~V~~i~gDIt~ 93 (832)
....+|+||||++|..+..+... .++.-.|+..||.... .++ +..|+.+.-.+
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgS 129 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGS 129 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESC
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchh
Confidence 34578999999999877655443 2345679999987531 222 23455554333
Q ss_pred hhHHHHHHHHHhhccCCcccEEEeCCCCCCCCC------------c--------hhHHh-HHh-HHHHHHHHHHHhhccc
Q 003302 94 PECRARVKKVMEEHGVRAFDLVLHDGSPNVGGA------------W--------AQEAM-SQN-ALVIDSVKLATQFLAP 151 (832)
Q Consensus 94 ~~~~~~l~~~L~~~~~~~FDlVlsDgapnv~g~------------w--------~~D~~-~q~-~L~~~aLk~A~~~Lkp 151 (832)
... ..++. ++||+|+|+.+..+... | ...+| .|. .-....|+.-.+.|+|
T Consensus 130 Fy~-----rlfp~---~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~p 201 (359)
T 1m6e_X 130 FYG-----RLFPR---NTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVP 201 (359)
T ss_dssp SSS-----CCSCT---TCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCT
T ss_pred hhh-----ccCCC---CceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 211 01222 67899999876432110 0 00011 111 1124557788899999
Q ss_pred CcEEEEEEc
Q 003302 152 KGTFVTKVF 160 (832)
Q Consensus 152 GG~fV~KVF 160 (832)
||.||+.++
T Consensus 202 GG~mvl~~~ 210 (359)
T 1m6e_X 202 GGRMVLTIL 210 (359)
T ss_dssp TCEEEEEEE
T ss_pred CceEEEEEe
Confidence 999999665
No 302
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=95.60 E-value=0.029 Score=62.20 Aligned_cols=106 Identities=15% Similarity=0.173 Sum_probs=64.2
Q ss_pred CEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC------CCCCceEEEccCCChhHHHHHHHHHhhccCCcccEEEe
Q 003302 44 HAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA------PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117 (832)
Q Consensus 44 ~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVls 117 (832)
.+||||+||.||++.-+...- -..|+|||+++.. .++++.++++||++..... +.... .....||+|+.
T Consensus 3 ~~vidLFsG~GGlslG~~~aG--~~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~-~~~~~--~~~~~~D~i~g 77 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAG--FDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEI-IKGFF--KNDMPIDGIIG 77 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHT--CEEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHH-HHHHH--CSCCCCCEEEE
T ss_pred CeEEEEccCcCHHHHHHHHCC--CcEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHH-HHhhc--ccCCCeeEEEe
Confidence 579999999999998887762 2357799999742 4678888999998865332 21111 01256799999
Q ss_pred CCCCCCC---CCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 118 DGSPNVG---GAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 118 Dgapnv~---g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
++++... |....+.. ...|....++ +...++|- +||+
T Consensus 78 gpPCQ~fS~ag~~~~~d~-r~~L~~~~~~-~v~~~~P~-~~v~ 117 (376)
T 3g7u_A 78 GPPCQGFSSIGKGNPDDS-RNQLYMHFYR-LVSELQPL-FFLA 117 (376)
T ss_dssp CCCCCTTC-------CHH-HHHHHHHHHH-HHHHHCCS-EEEE
T ss_pred cCCCCCcccccCCCCCCc-hHHHHHHHHH-HHHHhCCC-EEEE
Confidence 8764421 11111111 2245555554 34556885 3444
No 303
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=95.40 E-value=0.033 Score=60.12 Aligned_cols=118 Identities=24% Similarity=0.229 Sum_probs=68.6
Q ss_pred CCEEEEEcCCcCHHHHHHH---HhCCCCC--EEEEEeCCCCCCC------------------C-----C--ceEEEccCC
Q 003302 43 SHAVLDLCAAPGGWMQVAV---QRVPVGS--LVLGLDLVPIAPI------------------R-----G--AVSLEQDIT 92 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La---~~~p~~~--~ViGVDLsp~~~i------------------~-----~--V~~i~gDIt 92 (832)
.-+|||+|-|+|--..++. ....+.. ++++++..++... | + +.++.+|+.
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~ 176 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDAR 176 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHH
Confidence 3579999999998543322 1222233 4677777654311 1 1 123445543
Q ss_pred ChhHHHHHHHHHhhccCCcccEEEeCC-CCCCC-CCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHH
Q 003302 93 KPECRARVKKVMEEHGVRAFDLVLHDG-SPNVG-GAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLY 170 (832)
Q Consensus 93 ~~~~~~~l~~~L~~~~~~~FDlVlsDg-apnv~-g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~ 170 (832)
. .+.......||+|+.|| +|... ..|..+ .+..+.++|+|||+|++ |.+. ..+..
T Consensus 177 ~---------~l~~l~~~~~Da~flDgFsP~kNPeLWs~e----------~f~~l~~~~~pgg~laT--Ytaa--g~VRR 233 (308)
T 3vyw_A 177 K---------RIKEVENFKADAVFHDAFSPYKNPELWTLD----------FLSLIKERIDEKGYWVS--YSSS--LSVRK 233 (308)
T ss_dssp H---------HGGGCCSCCEEEEEECCSCTTTSGGGGSHH----------HHHHHHTTEEEEEEEEE--SCCC--HHHHH
T ss_pred H---------HHhhhcccceeEEEeCCCCcccCcccCCHH----------HHHHHHHHhCCCcEEEE--EeCc--HHHHH
Confidence 2 23333224689999999 45432 246554 45567899999999986 6654 34556
Q ss_pred HHHHcccceEEec
Q 003302 171 CLKQLFEKVEVDK 183 (832)
Q Consensus 171 ~L~~~F~~V~~~K 183 (832)
.|+..=-.|...+
T Consensus 234 ~L~~aGF~V~k~~ 246 (308)
T 3vyw_A 234 SLLTLGFKVGSSR 246 (308)
T ss_dssp HHHHTTCEEEEEE
T ss_pred HHHHCCCEEEecC
Confidence 6666522455543
No 304
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=93.85 E-value=0.041 Score=60.04 Aligned_cols=71 Identities=18% Similarity=0.260 Sum_probs=49.1
Q ss_pred CEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC------CCCCceEEEccCCChhHHHHHHHHHhhccCCcccEEEe
Q 003302 44 HAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA------PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117 (832)
Q Consensus 44 ~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVls 117 (832)
.+||||+||.||++..+....-.-..|++||+++.. ..+++.++++||++..... +.. ..||+|+.
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~~-----~~~---~~~D~l~~ 74 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEE-----FDR---LSFDMILM 74 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHHH-----HHH---HCCSEEEE
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHhH-----cCc---CCcCEEEE
Confidence 479999999999999887762111379999999732 3566678899998864221 221 24699999
Q ss_pred CCCCC
Q 003302 118 DGSPN 122 (832)
Q Consensus 118 Dgapn 122 (832)
++++.
T Consensus 75 gpPCq 79 (343)
T 1g55_A 75 SPPCQ 79 (343)
T ss_dssp CCC--
T ss_pred cCCCc
Confidence 88643
No 305
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=93.19 E-value=0.053 Score=57.69 Aligned_cols=34 Identities=35% Similarity=0.477 Sum_probs=29.9
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCC
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVP 77 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp 77 (832)
.+|..|||+|||+|..+.+++.. +..++|||+++
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~---g~~~~g~e~~~ 267 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARW---GRRALGVELVP 267 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT---TCEEEEEESCH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCH
Confidence 57899999999999999888765 46899999987
No 306
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=93.01 E-value=0.59 Score=49.15 Aligned_cols=117 Identities=10% Similarity=0.152 Sum_probs=71.5
Q ss_pred CCEEEEEcCCcCHHHHHHHHh------CCCCCEEEEEeCCCCC-------------------------------------
Q 003302 43 SHAVLDLCAAPGGWMQVAVQR------VPVGSLVLGLDLVPIA------------------------------------- 79 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~------~p~~~~ViGVDLsp~~------------------------------------- 79 (832)
...|+++|+..|+-+..++.. .+...+|+|+|.-.-.
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 348999999999977766543 1245789999843210
Q ss_pred ----C-C-CCceEEEccCCChhHHHHHHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCc
Q 003302 80 ----P-I-RGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKG 153 (832)
Q Consensus 80 ----~-i-~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG 153 (832)
+ + .+|.++.|++.+ .+...+...+...||+|..|+- + ... +...+..+...|+|||
T Consensus 150 ~~~~g~~~~~i~li~G~~~d-----TL~~~l~~~~~~~~dlv~ID~D------~-Y~~------t~~~le~~~p~l~~GG 211 (257)
T 3tos_A 150 SDFFGHVTQRSVLVEGDVRE-----TVPRYLAENPQTVIALAYFDLD------L-YEP------TKAVLEAIRPYLTKGS 211 (257)
T ss_dssp TSTTTTSCCSEEEEESCHHH-----HHHHHHHHCTTCCEEEEEECCC------C-HHH------HHHHHHHHGGGEEEEE
T ss_pred hhhcCCCCCcEEEEEecHHH-----HHHHHHHhCCCCceEEEEEcCc------c-cch------HHHHHHHHHHHhCCCc
Confidence 1 1 346777777643 2223333223356899999962 1 111 2456667889999999
Q ss_pred EEEEEEcCCCCHHHHHHHHHHccc
Q 003302 154 TFVTKVFRSQDYSSVLYCLKQLFE 177 (832)
Q Consensus 154 ~fV~KVFrs~d~~~ll~~L~~~F~ 177 (832)
.+|+--+....+.....++..++.
T Consensus 212 vIv~DD~~~~~w~G~~~A~~ef~~ 235 (257)
T 3tos_A 212 IVAFDELDNPKWPGENIAMRKVLG 235 (257)
T ss_dssp EEEESSTTCTTCTHHHHHHHHHTC
T ss_pred EEEEcCCCCCCChHHHHHHHHHHh
Confidence 999855533333344455555554
No 307
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=92.67 E-value=0.76 Score=46.62 Aligned_cols=111 Identities=15% Similarity=0.129 Sum_probs=68.7
Q ss_pred CCEEEEEcCCcCHHHHHHHHhCC--CCCEEEEEeCCCCCCCCCceEEEccCCChhHHHHHHHHHhhccCCcccEEEeCCC
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRVP--VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~p--~~~~ViGVDLsp~~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsDga 120 (832)
+.+||=.|++ ||++..++..+- .+..|+.++..+......+.++++|+++......+...+. .+.+|+|+++..
T Consensus 4 ~k~vlITGas-~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~---~~~id~lv~nAg 79 (244)
T 4e4y_A 4 MANYLVTGGS-KGIGKAVVELLLQNKNHTVINIDIQQSFSAENLKFIKADLTKQQDITNVLDIIK---NVSFDGIFLNAG 79 (244)
T ss_dssp CEEEEEETTT-SHHHHHHHHHHTTSTTEEEEEEESSCCCCCTTEEEEECCTTCHHHHHHHHHHTT---TCCEEEEEECCC
T ss_pred CCeEEEeCCC-ChHHHHHHHHHHhcCCcEEEEeccccccccccceEEecCcCCHHHHHHHHHHHH---hCCCCEEEECCc
Confidence 5567777765 667777765543 3567888898876556678899999999876555554443 257799999986
Q ss_pred CCCCCC-c--hhHHhHH---h--HHHHHHHHHHHhhcccCcEEEE
Q 003302 121 PNVGGA-W--AQEAMSQ---N--ALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 121 pnv~g~-w--~~D~~~q---~--~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
....+. + ..+.+.. . .-...+++.+...|+++|.+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~ 124 (244)
T 4e4y_A 80 ILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVF 124 (244)
T ss_dssp CCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEE
T ss_pred cCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEE
Confidence 432221 1 1222211 0 1122344555666777888876
No 308
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=92.35 E-value=0.11 Score=55.43 Aligned_cols=96 Identities=9% Similarity=0.039 Sum_probs=61.1
Q ss_pred CCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC---------CCCCCceEEEccCCChhHHHHHHHHHhhccCCccc
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI---------APIRGAVSLEQDITKPECRARVKKVMEEHGVRAFD 113 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~---------~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FD 113 (832)
+..+|||-||+|.++..+... ...++.||+.+- ....++.++..|... .+...++. ..+||
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~---~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~-----~L~~l~~~--~~~fd 161 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRS---QDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVS-----KLNALLPP--PEKRG 161 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCT---TSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHH-----HHHHHCSC--TTSCE
T ss_pred CCCceeEeCCcHHHHHHHcCC---CCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHH-----HHHHhcCC--CCCcc
Confidence 456899999999999877652 469999999862 122457778887543 22222221 14689
Q ss_pred EEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 114 LVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 114 lVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
+|+.||+....+ .+. -+..+|. ....+-|+|++++
T Consensus 162 LVfiDPPYe~k~-----~~~---~vl~~L~-~~~~r~~~Gi~v~ 196 (283)
T 2oo3_A 162 LIFIDPSYERKE-----EYK---EIPYAIK-NAYSKFSTGLYCV 196 (283)
T ss_dssp EEEECCCCCSTT-----HHH---HHHHHHH-HHHHHCTTSEEEE
T ss_pred EEEECCCCCCCc-----HHH---HHHHHHH-HhCccCCCeEEEE
Confidence 999998743221 111 1222332 3456789999997
No 309
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=91.77 E-value=0.15 Score=55.64 Aligned_cols=71 Identities=20% Similarity=0.267 Sum_probs=49.4
Q ss_pred CEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC------CCCCceEEEccCCChhHHHHHHHHHhhccCCcccEEEe
Q 003302 44 HAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA------PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117 (832)
Q Consensus 44 ~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVls 117 (832)
.+||||+||.||++.-+....-..-.|.++|+++.. ..++..++++||++.... .+.. ..+|+|+.
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~~~~-----~~~~---~~~D~l~g 75 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTPQ-----VIKK---WNVDTILM 75 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGCCHH-----HHHH---TTCCEEEE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCCCceeccccccCCHH-----Hhcc---CCCCEEEe
Confidence 379999999999998887652111358899999743 356677789999886432 1222 24699998
Q ss_pred CCCCC
Q 003302 118 DGSPN 122 (832)
Q Consensus 118 Dgapn 122 (832)
.+++.
T Consensus 76 gpPCQ 80 (333)
T 4h0n_A 76 SPPCQ 80 (333)
T ss_dssp CCCCC
T ss_pred cCCCc
Confidence 77544
No 310
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=91.69 E-value=0.24 Score=53.80 Aligned_cols=70 Identities=10% Similarity=0.135 Sum_probs=47.3
Q ss_pred CCEEEEEcCCcCHHHHHHHHhCCC-CCEE-EEEeCCCCC------CCCCceEEEccCCChhHHHHHHHHHhhccCCcccE
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRVPV-GSLV-LGLDLVPIA------PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~p~-~~~V-iGVDLsp~~------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDl 114 (832)
..+||||+||.||++..+... +. .-.| .|+|+++.. ..++. ++++||++.... .+.. ..+|+
T Consensus 10 ~~~vidLFaG~GG~~~G~~~a-G~~~~~v~~a~e~d~~a~~ty~~N~~~~-~~~~DI~~~~~~-----~i~~---~~~Di 79 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERS-SININATFIPFDINEIANKIYSKNFKEE-VQVKNLDSISIK-----QIES---LNCNT 79 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHS-SCCCCEEEEEECCCHHHHHHHHHHHCCC-CBCCCTTTCCHH-----HHHH---TCCCE
T ss_pred CCEEEEECCChhHHHHHHHHc-CCCceEEEEEEECCHHHHHHHHHHCCCC-cccCChhhcCHH-----Hhcc---CCCCE
Confidence 458999999999999887664 21 1356 799999732 23443 578899986532 1222 24699
Q ss_pred EEeCCCCC
Q 003302 115 VLHDGSPN 122 (832)
Q Consensus 115 VlsDgapn 122 (832)
|+..+++.
T Consensus 80 l~ggpPCQ 87 (327)
T 3qv2_A 80 WFMSPPCQ 87 (327)
T ss_dssp EEECCCCT
T ss_pred EEecCCcc
Confidence 99876543
No 311
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=91.60 E-value=1.2 Score=44.94 Aligned_cols=115 Identities=18% Similarity=0.089 Sum_probs=64.9
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCCCCCCceEEEccCCChhHHHHHHHHHhhcc-CCcccEEEeCC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHG-VRAFDLVLHDG 119 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~-~~~FDlVlsDg 119 (832)
.+.+||=.|++ |+++..++..+ ..+..|++++.++......+.++.+|+++......+...+.... .+.+|+|+++.
T Consensus 6 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv~~A 84 (241)
T 1dhr_A 6 EARRVLVYGGR-GALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVA 84 (241)
T ss_dssp CCCEEEEETTT-SHHHHHHHHHHHTTTCEEEEEESSCCTTSSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHhCCCEEEEEeCChhhccCCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEEEcc
Confidence 46778877754 56666665543 34678999998764333346677899998765444433332211 03679999998
Q ss_pred CCCCCCCc----hhHHhHH---h--HHHHHHHHHHHhhcccCcEEEE
Q 003302 120 SPNVGGAW----AQEAMSQ---N--ALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 120 apnv~g~w----~~D~~~q---~--~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
.....+.+ ..+.+.. . .-....++.+...|+.+|.+|+
T Consensus 85 g~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~ 131 (241)
T 1dhr_A 85 GGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTL 131 (241)
T ss_dssp CCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred cccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEE
Confidence 64322211 1111111 1 1122344556666777888876
No 312
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=91.45 E-value=0.22 Score=52.86 Aligned_cols=68 Identities=13% Similarity=-0.008 Sum_probs=41.5
Q ss_pred CceEEEccCCChhHHHHHHHHHhhccCCcccEEEeCCCCCCCCCch--------hHHhH-HhHHHHHHHHHHHhhcccCc
Q 003302 83 GAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWA--------QEAMS-QNALVIDSVKLATQFLAPKG 153 (832)
Q Consensus 83 ~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsDgapnv~g~w~--------~D~~~-q~~L~~~aLk~A~~~LkpGG 153 (832)
.+.++++|+++. ...+. .++||+|++|++.+....+. ...+. -...+..++..+.++|+|||
T Consensus 21 ~~~i~~gD~~~~------l~~l~---~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G 91 (297)
T 2zig_A 21 VHRLHVGDAREV------LASFP---EASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGG 91 (297)
T ss_dssp CEEEEESCHHHH------HTTSC---TTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEE
T ss_pred CCEEEECcHHHH------HhhCC---CCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCc
Confidence 567889998652 11122 26789999998754322111 01111 11223567889999999999
Q ss_pred EEEEEE
Q 003302 154 TFVTKV 159 (832)
Q Consensus 154 ~fV~KV 159 (832)
+|++.+
T Consensus 92 ~l~i~~ 97 (297)
T 2zig_A 92 RLVIVV 97 (297)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 998854
No 313
>3iyl_W VP1; non-enveloped virus, membrane penetration protein, autocleav myristol group, icosahedral virus; HET: MYR; 3.30A {Grass carp reovirus} PDB: 3k1q_A
Probab=90.83 E-value=0.62 Score=57.40 Aligned_cols=90 Identities=22% Similarity=0.235 Sum_probs=61.9
Q ss_pred CcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEE-cCCCCH-HHHHHHHHHcccceEEecCCCC
Q 003302 110 RAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKV-FRSQDY-SSVLYCLKQLFEKVEVDKPAAS 187 (832)
Q Consensus 110 ~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KV-Frs~d~-~~ll~~L~~~F~~V~~~KP~sS 187 (832)
|.|.+|.||.--...|.-...+. ..+....+..|+.+..+||.+|+|+ |..... ..+...+..+|..+.++||.-.
T Consensus 573 Gtf~fVYSDVDQV~d~~~Dl~As--~r~~~~~l~~~l~~ts~GG~~v~KiNFPT~~vw~~if~~~~~~~~~~~i~KPli~ 650 (1299)
T 3iyl_W 573 GTFGLVYADLDQVEDAGTDMPAA--NRAAIAMLGTALQMTTAGGVSVLKVNFPTRAFWTQVFNLYATHATTLHLVKPTIV 650 (1299)
T ss_dssp CCEEEEEECCCCC-----CCHHH--HHHHHHHHHHHHHHEEEEEEEEEEESCCCTTHHHHHHHHTTTTCSCEEEEECCSS
T ss_pred CceEEEEecchhhccCCcchhhh--hHHHHHHHHHHHHhhcCCceEEEEEcCCchHHHHHHHHHhcchhheeeeecceee
Confidence 88999999974333333233332 3455677888999999999999998 555542 2233334455899999999886
Q ss_pred CCCCcceeEEEeeccC
Q 003302 188 RSASAEIYLLGIKYKA 203 (832)
Q Consensus 188 R~~SaEiyvVc~gfk~ 203 (832)
. |.|+|||.-+...
T Consensus 651 N--nvEvf~v~~~r~~ 664 (1299)
T 3iyl_W 651 N--SSEVFLVFGGRQS 664 (1299)
T ss_dssp S--CCCEEEEESCCCT
T ss_pred c--ceEEEEEEeeecc
Confidence 5 5799999877763
No 314
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=90.64 E-value=0.22 Score=53.31 Aligned_cols=107 Identities=16% Similarity=0.143 Sum_probs=65.0
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCE-EEEEeCCCCC------CCCCceEEEccCCChhHHHHHHHHHhhccCCcccE
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVPVGSL-VLGLDLVPIA------PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p~~~~-ViGVDLsp~~------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDl 114 (832)
...+||||+||.||++..+... +-... |+++|+++.. ..++..++.+||++..... +... +.+|+
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~a-G~~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~~~~-----i~~~--~~~Dl 86 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDL-GIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQKH-----IQEW--GPFDL 86 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHT-TBCEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCHHH-----HHHT--CCCSE
T ss_pred CCCEEEEeCcCccHHHHHHHHC-CCccceEEEEECCHHHHHHHHHhCCCCceeCCChHHccHHH-----hccc--CCcCE
Confidence 4568999999999999877664 32222 6899998732 3566778899999865321 2211 45799
Q ss_pred EEeCCCCCCC---C-Cc-hhHHhHHhHHHHHHHHHHHhhcccC-c-----EEEEE
Q 003302 115 VLHDGSPNVG---G-AW-AQEAMSQNALVIDSVKLATQFLAPK-G-----TFVTK 158 (832)
Q Consensus 115 VlsDgapnv~---g-~w-~~D~~~q~~L~~~aLk~A~~~LkpG-G-----~fV~K 158 (832)
|+..+++... | .. -.+. ....|....++ +...++|- | +|++.
T Consensus 87 l~ggpPCQ~fS~ag~~r~g~~d-~r~~L~~~~~r-ii~~~~P~~~~~~P~~~l~E 139 (295)
T 2qrv_A 87 VIGGSPCNDLSIVNPARKGLYE-GTGRLFFEFYR-LLHDARPKEGDDRPFFWLFE 139 (295)
T ss_dssp EEECCCCGGGBTTCTTCCTTTS-TTTTHHHHHHH-HHHHHSCCTTCCCCCEEEEE
T ss_pred EEecCCCccccccCcccccccc-ccchhHHHHHH-HHHHhCcccccCCccEEEEE
Confidence 9988754421 1 11 0111 11245555554 34567776 3 67663
No 315
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=90.60 E-value=0.31 Score=53.54 Aligned_cols=53 Identities=15% Similarity=-0.069 Sum_probs=42.6
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC--------CCCCCceEEEccCCChh
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI--------APIRGAVSLEQDITKPE 95 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~--------~~i~~V~~i~gDIt~~~ 95 (832)
++..||++|+|+|++|..|+.... ..+|++|++.+- ...+++.++.+|+....
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~-~~~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~l~~~ 118 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYC-PRQYSLLEKRSSLYKFLNAKFEGSPLQILKRDPYDWS 118 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHC-CSEEEEECCCHHHHHHHHHHTTTSSCEEECSCTTCHH
T ss_pred CCCEEEEECCCCCHHHHHHHhhCC-CCEEEEEecCHHHHHHHHHhccCCCEEEEECCccchh
Confidence 468999999999999999998632 348999999851 13467999999998765
No 316
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=90.52 E-value=0.4 Score=51.20 Aligned_cols=97 Identities=13% Similarity=0.163 Sum_probs=58.9
Q ss_pred CEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC------CCCCceEEEccCCChhHHHHHHHHHhhccCCcccEEEe
Q 003302 44 HAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA------PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117 (832)
Q Consensus 44 ~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVls 117 (832)
++||||.||.||++.-+... + --.|.++|+.+.. ..+ ..++.+||++... .....+|+|+.
T Consensus 1 mkvidLFsG~GG~~~G~~~a-G-~~~v~a~e~d~~a~~ty~~N~~-~~~~~~DI~~i~~----------~~~~~~D~l~g 67 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKA-G-FRIICANEYDKSIWKTYESNHS-AKLIKGDISKISS----------DEFPKCDGIIG 67 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHT-T-CEEEEEEECCTTTHHHHHHHCC-SEEEESCGGGCCG----------GGSCCCSEEEC
T ss_pred CeEEEeCcCccHHHHHHHHC-C-CEEEEEEeCCHHHHHHHHHHCC-CCcccCChhhCCH----------hhCCcccEEEe
Confidence 47999999999999877654 3 2357799999854 233 3568899987532 11245698887
Q ss_pred CCCCCC---CCC-c-hhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 118 DGSPNV---GGA-W-AQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 118 Dgapnv---~g~-w-~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
.+++.. .|. . ..|. ...|....++ +...++|- +|++
T Consensus 68 gpPCQ~fS~ag~~~g~~d~--R~~L~~~~~r-~i~~~~Pk-~~~~ 108 (331)
T 3ubt_Y 68 GPPSQSWSEGGSLRGIDDP--RGKLFYEYIR-ILKQKKPI-FFLA 108 (331)
T ss_dssp CCCGGGTEETTEECCTTCG--GGHHHHHHHH-HHHHHCCS-EEEE
T ss_pred cCCCCCcCCCCCccCCCCc--hhHHHHHHHH-HHhccCCe-EEEe
Confidence 654321 111 1 1122 2345555555 44567886 4444
No 317
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=90.45 E-value=2 Score=44.50 Aligned_cols=80 Identities=11% Similarity=0.142 Sum_probs=52.1
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCCCCCCceEEEccCCChhHHHHHHHHHhhccCCcccEEEeCC
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDG 119 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsDg 119 (832)
..+.+||=.|++ ||++..++..+ ..+..|++++.+.......+.++++|+++......+...+... .+.+|+|+++.
T Consensus 12 ~~~k~vlVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~iD~lv~nA 89 (269)
T 3vtz_A 12 FTDKVAIVTGGS-SGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFKIDVTNEEEVKEAVEKTTKK-YGRIDILVNNA 89 (269)
T ss_dssp TTTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCC--CTTSSEEEECCTTCHHHHHHHHHHHHHH-HSCCCEEEECC
T ss_pred CCCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCchhccCceeEEEecCCCHHHHHHHHHHHHHH-cCCCCEEEECC
Confidence 357788877765 55665555433 2367899999887544446788999999987555444433221 25779999998
Q ss_pred CCC
Q 003302 120 SPN 122 (832)
Q Consensus 120 apn 122 (832)
...
T Consensus 90 g~~ 92 (269)
T 3vtz_A 90 GIE 92 (269)
T ss_dssp CCC
T ss_pred CcC
Confidence 643
No 318
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=90.21 E-value=2.8 Score=43.84 Aligned_cols=114 Identities=11% Similarity=0.042 Sum_probs=66.7
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
.+.+||=.|++ ||++..++..+ ..+..|+.++.+.-. .-..+.++++|+++......+...+... .
T Consensus 46 ~gk~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~ 123 (291)
T 3ijr_A 46 KGKNVLITGGD-SGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ-L 123 (291)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH-H
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH-c
Confidence 36788878865 55565554433 235689999887521 1235888999999976554444333221 2
Q ss_pred CcccEEEeCCCCCCC-C-Cc--hhHHhHH-----hHHHHHHHHHHHhhcccCcEEEE
Q 003302 110 RAFDLVLHDGSPNVG-G-AW--AQEAMSQ-----NALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 110 ~~FDlVlsDgapnv~-g-~w--~~D~~~q-----~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
+.+|+|+++...... + .. ..+.+.. ..-...+++.+...|+.+|.+|.
T Consensus 124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~ 180 (291)
T 3ijr_A 124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIIN 180 (291)
T ss_dssp SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEE
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEE
Confidence 577999999653321 1 11 1122211 11123455667778888998876
No 319
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=90.20 E-value=0.17 Score=54.95 Aligned_cols=98 Identities=19% Similarity=0.174 Sum_probs=58.1
Q ss_pred CCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC------CCCCceEEEccCCChhHHHHHHHHHhhccCCcccEEE
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA------PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVl 116 (832)
+.+||||+||.||++.-+... + -..|++||+++.. ..+... ++||++.... ....||+|+
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a-G-~~~v~~~e~d~~a~~t~~~N~~~~~--~~Di~~~~~~----------~~~~~D~l~ 76 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC-G-AECVYSNEWDKYAQEVYEMNFGEKP--EGDITQVNEK----------TIPDHDILC 76 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-T-CEEEEEECCCHHHHHHHHHHHSCCC--BSCGGGSCGG----------GSCCCSEEE
T ss_pred CCcEEEECCCcCHHHHHHHHC-C-CeEEEEEeCCHHHHHHHHHHcCCCC--cCCHHHcCHh----------hCCCCCEEE
Confidence 468999999999999888765 2 3468889999732 223332 6888864311 113579999
Q ss_pred eCCCCCCC---CCc-hhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 117 HDGSPNVG---GAW-AQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 117 sDgapnv~---g~w-~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
.++++... |.. ..+. ....|....++. ...++|- +|++
T Consensus 77 ~gpPCQ~fS~ag~~~g~~d-~r~~L~~~~~r~-i~~~~P~-~~~~ 118 (327)
T 2c7p_A 77 AGFPCQAFSISGKQKGFED-SRGTLFFDIARI-VREKKPK-VVFM 118 (327)
T ss_dssp EECCCTTTCTTSCCCGGGS-TTSCHHHHHHHH-HHHHCCS-EEEE
T ss_pred ECCCCCCcchhcccCCCcc-hhhHHHHHHHHH-HHhccCc-EEEE
Confidence 98865421 111 1111 112344555543 4457886 4444
No 320
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=90.15 E-value=2.9 Score=44.64 Aligned_cols=150 Identities=17% Similarity=0.124 Sum_probs=85.8
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCC---CCCEEEEEeCCCCC----CCCCceEEEccCCChhHHHHHHHHHhhccCCcccE
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVP---VGSLVLGLDLVPIA----PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p---~~~~ViGVDLsp~~----~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDl 114 (832)
.|..|+=+|||||.....|+.+.+ ...+.+.+|..+.. +.++|+.++. ..+..+...+...+.... =+
T Consensus 60 ~~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDPap~~~~l~~~~NV~li~~-fvde~dl~~l~~~~~~~~----iL 134 (307)
T 3mag_A 60 DGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHHDPILNGLRDVTLVTR-FVDEEYLRSIKKQLHPSK----II 134 (307)
T ss_dssp TTCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEESSCCCGGGTTCTTEEEEEC-CCCHHHHHHHHHHHTTSC----EE
T ss_pred CCcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcCCcchhhhcCCCcEEEEec-cCCHHHHHHHHHhccCCC----EE
Confidence 367999999999999999998765 34689999998854 6688887777 447666555554443211 34
Q ss_pred EEeCCCCCCCC-C-chhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHHHHHcccceEEecCCCCCCCCc
Q 003302 115 VLHDGSPNVGG-A-WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASA 192 (832)
Q Consensus 115 VlsDgapnv~g-~-w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~L~~~F~~V~~~KP~sSR~~Sa 192 (832)
.++|-...-++ . +..+...-. .+-...+..|+|-..++ | ||.+-......- .++-.-...=|+.....|+
T Consensus 135 LISDIRS~r~~~ep~t~~ll~Dy----~lQ~~w~~~LkP~aS~L-K-FR~P~p~~~~~~--~y~~dG~~~Lq~w~p~~St 206 (307)
T 3mag_A 135 LISDVRSKRGGNEPSTADLLSNY----ALQNVMISILNPVASSL-K-WRCPFPDQWIKD--FYIPHGNKMLQPFAPSYSA 206 (307)
T ss_dssp EEECCCC------CCHHHHHHHH----HHHHHHHHHHCCSEEEE-E-ECCCCGGGCCCC--EEEECCEEECCTTCCTTCC
T ss_pred EEEEecCCCCCCCccHHHHHHHH----HHHHHHHHHhhhHHHhc-c-ccCCCCcCCCcc--eEecCCCEEecccCCCCcc
Confidence 56665432111 1 111111111 12234567899987775 2 444322211100 0111222333666677888
Q ss_pred ceeEEEeeccCC
Q 003302 193 EIYLLGIKYKAP 204 (832)
Q Consensus 193 EiyvVc~gfk~p 204 (832)
|..+++.+..+|
T Consensus 207 E~RL~v~~~~~~ 218 (307)
T 3mag_A 207 EMRLLSIYTGEN 218 (307)
T ss_dssp CEEEEEECCTTC
T ss_pred eEEEEEecCCCc
Confidence 988887665554
No 321
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=90.09 E-value=1.4 Score=42.76 Aligned_cols=65 Identities=14% Similarity=0.124 Sum_probs=44.6
Q ss_pred CEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCCCCCCceEEEccCCChhHHHHHHHHHhhccCCcccEEEeCCCC
Q 003302 44 HAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121 (832)
Q Consensus 44 ~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsDgap 121 (832)
++||=.|+ +|+++..++..+-.+..|++++.++- ++.+|++++.....+...+ +.+|+|+++...
T Consensus 4 M~vlVtGa-sg~iG~~~~~~l~~g~~V~~~~r~~~-------~~~~D~~~~~~~~~~~~~~-----~~~d~vi~~ag~ 68 (202)
T 3d7l_A 4 MKILLIGA-SGTLGSAVKERLEKKAEVITAGRHSG-------DVTVDITNIDSIKKMYEQV-----GKVDAIVSATGS 68 (202)
T ss_dssp CEEEEETT-TSHHHHHHHHHHTTTSEEEEEESSSS-------SEECCTTCHHHHHHHHHHH-----CCEEEEEECCCC
T ss_pred cEEEEEcC-CcHHHHHHHHHHHCCCeEEEEecCcc-------ceeeecCCHHHHHHHHHHh-----CCCCEEEECCCC
Confidence 36787775 57777777665445678999987653 4788999976544333322 457999998764
No 322
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=89.93 E-value=3.2 Score=42.69 Aligned_cols=114 Identities=19% Similarity=0.191 Sum_probs=65.4
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC----------------------CCCCceEEEccCCChhHHH
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA----------------------PIRGAVSLEQDITKPECRA 98 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~----------------------~i~~V~~i~gDIt~~~~~~ 98 (832)
.+.+||=.|++. |++..++..+ ..+..|+.+|.+.-. .-.++.++++|+++.....
T Consensus 9 ~gk~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~ 87 (287)
T 3pxx_A 9 QDKVVLVTGGAR-GQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVS 87 (287)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHH
T ss_pred CCCEEEEeCCCC-hHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHH
Confidence 367888777764 5555544433 236789999886210 1135788999999986554
Q ss_pred HHHHHHhhccCCcccEEEeCCCCCCCCC-chhHHhHH---h--HHHHHHHHHHHhhcccCcEEEE
Q 003302 99 RVKKVMEEHGVRAFDLVLHDGSPNVGGA-WAQEAMSQ---N--ALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 99 ~l~~~L~~~~~~~FDlVlsDgapnv~g~-w~~D~~~q---~--~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
.+...+... .+.+|+|+++......+. ...+.+.. . .-...+++.+...|..+|.+|+
T Consensus 88 ~~~~~~~~~-~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~ 151 (287)
T 3pxx_A 88 RELANAVAE-FGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIIT 151 (287)
T ss_dssp HHHHHHHHH-HSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEE
T ss_pred HHHHHHHHH-cCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEE
Confidence 444333221 256799999986432221 11111111 1 1123445566677788898876
No 323
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=89.93 E-value=3.2 Score=42.14 Aligned_cols=78 Identities=15% Similarity=0.084 Sum_probs=50.6
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCCCCCCceEEEccCCChhHHHHHHHHHhhccCCcccEEEeCCC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsDga 120 (832)
.+.+||=.|++ |+++..++..+ ..+..|++++.++.....++.++.+|+++......+...+... .+.+|+|+++..
T Consensus 6 ~~k~vlVTGas-~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~-~g~id~lv~~Ag 83 (250)
T 2fwm_X 6 SGKNVWVTGAG-KGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATEVMDVADAAQVAQVCQRLLAE-TERLDALVNAAG 83 (250)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCCCSSCCSSEEEECCTTCHHHHHHHHHHHHHH-CSCCCEEEECCC
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCchhhhcCCceEEEcCCCCHHHHHHHHHHHHHH-cCCCCEEEECCC
Confidence 35678877765 66666555433 2357899998876332224888999999976554444433221 257799999975
Q ss_pred C
Q 003302 121 P 121 (832)
Q Consensus 121 p 121 (832)
.
T Consensus 84 ~ 84 (250)
T 2fwm_X 84 I 84 (250)
T ss_dssp C
T ss_pred c
Confidence 4
No 324
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=89.90 E-value=0.38 Score=51.85 Aligned_cols=69 Identities=14% Similarity=0.182 Sum_probs=43.7
Q ss_pred CceEEEccCCChhHHHHHHHHHhhccCCcccEEEeCCCCCCCC--Cchh-HHhHHhHHHHHHHHHHHhhcccCcEEEEEE
Q 003302 83 GAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGG--AWAQ-EAMSQNALVIDSVKLATQFLAPKGTFVTKV 159 (832)
Q Consensus 83 ~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsDgapnv~g--~w~~-D~~~q~~L~~~aLk~A~~~LkpGG~fV~KV 159 (832)
.+.++++|.... + ..+. .++||+|++||+.+.+. .|.. .+..-...+..+|..+.++|+|||.+++.+
T Consensus 14 ~~~ii~gD~~~~-----l-~~l~---~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~ 84 (323)
T 1boo_A 14 NGSMYIGDSLEL-----L-ESFP---EESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDF 84 (323)
T ss_dssp SEEEEESCHHHH-----G-GGSC---SSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CceEEeCcHHHH-----H-hhCC---CCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEE
Confidence 466788886541 1 1222 26789999999866542 1211 111112345678889999999999999865
Q ss_pred c
Q 003302 160 F 160 (832)
Q Consensus 160 F 160 (832)
-
T Consensus 85 ~ 85 (323)
T 1boo_A 85 G 85 (323)
T ss_dssp C
T ss_pred C
Confidence 4
No 325
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=89.89 E-value=2.9 Score=42.63 Aligned_cols=115 Identities=13% Similarity=0.065 Sum_probs=66.3
Q ss_pred CCCEEEEEcCCcC-HHHHHHHHhC-CCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 42 SSHAVLDLCAAPG-GWMQVAVQRV-PVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 42 ~g~~VLDLGcGPG-g~sq~La~~~-p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
.+.+||=.|++.| |++..++..+ ..+..|+.++.+.-. +..++.++++|+++......+...+...
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~- 84 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ- 84 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH-
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH-
Confidence 4678888888733 3444333322 236689998876421 1126899999999987655554444322
Q ss_pred CCcccEEEeCCCCCC-----CCCc--hhHHhHH-----hHHHHHHHHHHHhhcccCcEEEE
Q 003302 109 VRAFDLVLHDGSPNV-----GGAW--AQEAMSQ-----NALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 109 ~~~FDlVlsDgapnv-----~g~w--~~D~~~q-----~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
.+.+|+|+++..... ...+ ..+.+.. ..-...+++.+...|+++|.+|+
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~ 145 (266)
T 3oig_A 85 VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVT 145 (266)
T ss_dssp HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEE
T ss_pred hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEE
Confidence 256799999975432 1111 1111111 01123445566777888999886
No 326
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=89.81 E-value=2.2 Score=42.44 Aligned_cols=74 Identities=20% Similarity=0.137 Sum_probs=49.8
Q ss_pred CCEEEEEcCCcCHHHHHHHHhCC-CCCEEEEEeCCCCCCCCCceEEEccCCChhHHHHHHHHHhhccCCcccEEEeCCCC
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRVP-VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~p-~~~~ViGVDLsp~~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsDgap 121 (832)
+.+||=.|+ +|+++..++..+- .+..|++++.++- ...+.++++|+++......+...+.. .+.+|+|+++...
T Consensus 2 ~k~vlVtGa-sggiG~~la~~l~~~G~~V~~~~r~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~--~~~~d~li~~ag~ 76 (242)
T 1uay_A 2 ERSALVTGG-ASGLGRAAALALKARGYRVVVLDLRRE--GEDLIYVEGDVTREEDVRRAVARAQE--EAPLFAVVSAAGV 76 (242)
T ss_dssp CCEEEEETT-TSHHHHHHHHHHHHHTCEEEEEESSCC--SSSSEEEECCTTCHHHHHHHHHHHHH--HSCEEEEEECCCC
T ss_pred CCEEEEeCC-CChHHHHHHHHHHHCCCEEEEEccCcc--ccceEEEeCCCCCHHHHHHHHHHHHh--hCCceEEEEcccc
Confidence 456777775 4677666554431 2568999988765 45678999999998765544443321 2567999998754
No 327
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=89.70 E-value=3.5 Score=42.37 Aligned_cols=77 Identities=16% Similarity=0.163 Sum_probs=49.9
Q ss_pred CCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCCCCCCceEEEccCCChhHHHHHHHHHhhccCCcccEEEeCCCC
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsDgap 121 (832)
+.+||=.|++ |+++..++..+ ..+..|++++.++-. -.++.++.+|+++......+...+... .+.+|+|+++...
T Consensus 8 ~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~g~iD~lv~~Ag~ 84 (264)
T 2dtx_A 8 DKVVIVTGAS-MGIGRAIAERFVDEGSKVIDLSIHDPG-EAKYDHIECDVTNPDQVKASIDHIFKE-YGSISVLVNNAGI 84 (264)
T ss_dssp TCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESSCCC-SCSSEEEECCTTCHHHHHHHHHHHHHH-HSCCCEEEECCCC
T ss_pred CCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEecCccc-CCceEEEEecCCCHHHHHHHHHHHHHH-cCCCCEEEECCCC
Confidence 5678877765 56665555433 235689999887643 245888999999976554443333221 2567999999764
Q ss_pred C
Q 003302 122 N 122 (832)
Q Consensus 122 n 122 (832)
.
T Consensus 85 ~ 85 (264)
T 2dtx_A 85 E 85 (264)
T ss_dssp C
T ss_pred C
Confidence 3
No 328
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=89.43 E-value=0.29 Score=53.85 Aligned_cols=106 Identities=14% Similarity=0.141 Sum_probs=58.2
Q ss_pred CCCCCEEEEEcCCc-CHHHHHHHHhCCCCCEEEEEeCCCCC----CCCCceEEEccCCChhH-HHHHHHHHhhccCCccc
Q 003302 40 LRSSHAVLDLCAAP-GGWMQVAVQRVPVGSLVLGLDLVPIA----PIRGAVSLEQDITKPEC-RARVKKVMEEHGVRAFD 113 (832)
Q Consensus 40 l~~g~~VLDLGcGP-Gg~sq~La~~~p~~~~ViGVDLsp~~----~i~~V~~i~gDIt~~~~-~~~l~~~L~~~~~~~FD 113 (832)
+++|.+||-+|||+ |.++..+++.++ ...|+++|.++-. .--++.++ |..+... .+.+.....+ ..||
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~lGa~~i--~~~~~~~~~~~~~~~~~g---~g~D 256 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLG-AACVIVGDQNPERLKLLSDAGFETI--DLRNSAPLRDQIDQILGK---PEVD 256 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHHHTTTCEEE--ETTSSSCHHHHHHHHHSS---SCEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHHHcCCcEE--cCCCcchHHHHHHHHhCC---CCCC
Confidence 57899999999877 666666666654 2389999988621 11244433 3332222 2334333322 2579
Q ss_pred EEEeCCCCCCCCCch---hHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 114 LVLHDGSPNVGGAWA---QEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 114 lVlsDgapnv~g~w~---~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
+|+... ++.+. .++.. . -...++..+.++|++||++++
T Consensus 257 vvid~~----g~~~~~~~~~~~~-~-~~~~~~~~~~~~l~~gG~iv~ 297 (398)
T 2dph_A 257 CGVDAV----GFEAHGLGDEANT-E-TPNGALNSLFDVVRAGGAIGI 297 (398)
T ss_dssp EEEECS----CTTCBCSGGGTTS-B-CTTHHHHHHHHHEEEEEEEEC
T ss_pred EEEECC----CCccccccccccc-c-ccHHHHHHHHHHHhcCCEEEE
Confidence 998643 12110 00000 0 000134567899999999986
No 329
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=89.41 E-value=0.78 Score=49.39 Aligned_cols=98 Identities=13% Similarity=0.116 Sum_probs=54.6
Q ss_pred CCCCCEEEEEcCCc-CHHHHHHHHhCCCCCEEEEEeCCCCC----CCCCceEEEccCCC-hhHHHHHHHHHhhccCCccc
Q 003302 40 LRSSHAVLDLCAAP-GGWMQVAVQRVPVGSLVLGLDLVPIA----PIRGAVSLEQDITK-PECRARVKKVMEEHGVRAFD 113 (832)
Q Consensus 40 l~~g~~VLDLGcGP-Gg~sq~La~~~p~~~~ViGVDLsp~~----~i~~V~~i~gDIt~-~~~~~~l~~~L~~~~~~~FD 113 (832)
+++|.+||-+|||+ |.++..+++.++ ..|++++.++-. .--++..+ .|..+ ......+........-..||
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~lGa~~~-~~~~~~~~~~~~i~~~~~~~~g~g~D 242 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAYG--AFVVCTARSPRRLEVAKNCGADVT-LVVDPAKEEESSIIERIRSAIGDLPN 242 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHTTCSEE-EECCTTTSCHHHHHHHHHHHSSSCCS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEcCCHHHHHHHHHhCCCEE-EcCcccccHHHHHHHHhccccCCCCC
Confidence 57899999999765 444555566654 569999987521 01122211 12221 22233344333200003569
Q ss_pred EEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 114 LVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 114 lVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
+|+.... + . ..+..+..+|++||++|+
T Consensus 243 ~vid~~g----~---~----------~~~~~~~~~l~~~G~iv~ 269 (352)
T 1e3j_A 243 VTIDCSG----N---E----------KCITIGINITRTGGTLML 269 (352)
T ss_dssp EEEECSC----C---H----------HHHHHHHHHSCTTCEEEE
T ss_pred EEEECCC----C---H----------HHHHHHHHHHhcCCEEEE
Confidence 9996531 1 0 134567889999999987
No 330
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=89.39 E-value=0.82 Score=47.16 Aligned_cols=115 Identities=15% Similarity=0.093 Sum_probs=67.8
Q ss_pred CCCEEEEEcC-CcCHHHHHHHHhC-CCCCEEEEEeCCCCC-------CC-CCceEEEccCCChhHHHHHHHHHhhccCC-
Q 003302 42 SSHAVLDLCA-APGGWMQVAVQRV-PVGSLVLGLDLVPIA-------PI-RGAVSLEQDITKPECRARVKKVMEEHGVR- 110 (832)
Q Consensus 42 ~g~~VLDLGc-GPGg~sq~La~~~-p~~~~ViGVDLsp~~-------~i-~~V~~i~gDIt~~~~~~~l~~~L~~~~~~- 110 (832)
.+.+||=.|+ |+||++..++..+ ..+..|+.++.++.. .+ .++.++.+|+++......+...+... .+
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~ 84 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEA-IGA 84 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHH-HCT
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHH-hCC
Confidence 3578888898 4788877766544 235689999877521 12 25788999999987554444433221 14
Q ss_pred --cccEEEeCCCCCC------CCCc--hhHHhHH-h----HHHHHHHHHHHhhcccCcEEEE
Q 003302 111 --AFDLVLHDGSPNV------GGAW--AQEAMSQ-N----ALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 111 --~FDlVlsDgapnv------~g~w--~~D~~~q-~----~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
.+|+|+++..... ...+ ..+.+.. + .-....++.+...|+++|.+|.
T Consensus 85 ~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~ 146 (269)
T 2h7i_A 85 GNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVG 146 (269)
T ss_dssp TCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEE
T ss_pred CCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEE
Confidence 7899999975432 1111 1111111 1 1122345556667777888886
No 331
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=89.38 E-value=0.25 Score=51.46 Aligned_cols=34 Identities=26% Similarity=0.302 Sum_probs=29.7
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCC
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVP 77 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp 77 (832)
.+|..|||++||+|..+.++... +..++|||+++
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~---gr~~ig~e~~~ 244 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKL---GRNFIGCDMNA 244 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHT---TCEEEEEESCH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCH
Confidence 67899999999999998887765 46999999987
No 332
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=89.32 E-value=2.6 Score=43.45 Aligned_cols=114 Identities=13% Similarity=0.086 Sum_probs=66.4
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
.+.+||=.|++ ||++..++..+ ..+..|+.++..... .-.++.++++|+++......+...+... .
T Consensus 17 ~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~ 94 (270)
T 3is3_A 17 DGKVALVTGSG-RGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAH-F 94 (270)
T ss_dssp TTCEEEESCTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH-H
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence 36788877765 55665554433 235688887765321 1245889999999976554444333221 2
Q ss_pred CcccEEEeCCCCCCCCC-c--hhHHhHH-----hHHHHHHHHHHHhhcccCcEEEE
Q 003302 110 RAFDLVLHDGSPNVGGA-W--AQEAMSQ-----NALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 110 ~~FDlVlsDgapnv~g~-w--~~D~~~q-----~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
+.+|+|+++......+. + ..+.+.. ..-...+++.+...|+++|.+|+
T Consensus 95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~ 150 (270)
T 3is3_A 95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVL 150 (270)
T ss_dssp SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEE
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEE
Confidence 56799999976443221 1 1122211 11123445667778888999886
No 333
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=89.26 E-value=0.38 Score=47.14 Aligned_cols=94 Identities=20% Similarity=0.238 Sum_probs=53.9
Q ss_pred CCCCCEEEEEcCCc--CHHHHHHHHhCCCCCEEEEEeCCCCC----CCCCceEEEccCCChhHHHHHHHHHhhccCCccc
Q 003302 40 LRSSHAVLDLCAAP--GGWMQVAVQRVPVGSLVLGLDLVPIA----PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFD 113 (832)
Q Consensus 40 l~~g~~VLDLGcGP--Gg~sq~La~~~p~~~~ViGVDLsp~~----~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FD 113 (832)
+++|.+||-.||+. |..+..++... ++.|++++.++-. ...++.. ..|.++......+...... ..||
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~---~~~D 109 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMI--GARIYTTAGSDAKREMLSRLGVEY-VGDSRSVDFADEILELTDG---YGVD 109 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHTTCCSE-EEETTCSTHHHHHHHHTTT---CCEE
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHcCCCE-EeeCCcHHHHHHHHHHhCC---CCCe
Confidence 57899999998532 32222233332 4689999987521 0112222 2355554444444443322 3579
Q ss_pred EEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 114 LVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 114 lVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
+|+.+.. + . .+..+.++|+|||++|+
T Consensus 110 ~vi~~~g----~----~----------~~~~~~~~l~~~G~~v~ 135 (198)
T 1pqw_A 110 VVLNSLA----G----E----------AIQRGVQILAPGGRFIE 135 (198)
T ss_dssp EEEECCC----T----H----------HHHHHHHTEEEEEEEEE
T ss_pred EEEECCc----h----H----------HHHHHHHHhccCCEEEE
Confidence 9997642 1 1 23467789999999987
No 334
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=89.11 E-value=1.5 Score=44.09 Aligned_cols=114 Identities=18% Similarity=0.111 Sum_probs=63.0
Q ss_pred CCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCCCCCCceEEEccCCChhHHHHHHHHHhhcc-CCcccEEEeCCC
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHG-VRAFDLVLHDGS 120 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~-~~~FDlVlsDga 120 (832)
+.+||=.|++ |+++..++..+ ..+..|++++.++......+.++.+|+++......+...+.... .+.+|+|+++..
T Consensus 3 ~k~vlITGas-~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag 81 (236)
T 1ooe_A 3 SGKVIVYGGK-GALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAG 81 (236)
T ss_dssp CEEEEEETTT-SHHHHHHHHHHHHTTEEEEEEESSCCTTSSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEecCccccccccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEECCc
Confidence 4567767754 56666555543 23568999988764333346677899998765444433332211 036799999986
Q ss_pred CCCCCC--ch--hHHhHH---h--HHHHHHHHHHHhhcccCcEEEE
Q 003302 121 PNVGGA--WA--QEAMSQ---N--ALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 121 pnv~g~--w~--~D~~~q---~--~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
....+. +. .+.+.. . .-....++.+...|+.+|.+|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~ 127 (236)
T 1ooe_A 82 GWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQL 127 (236)
T ss_dssp CCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEE
Confidence 432211 11 111111 0 1112345556666777888876
No 335
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=88.99 E-value=0.45 Score=51.66 Aligned_cols=94 Identities=15% Similarity=0.219 Sum_probs=55.2
Q ss_pred CCCCCEEEEEcCCc-CHHHHHHHHhCCCCCEEEEEeCCCCC----CCCCce-EEEccCCChhHHHHHHHHHhhccCCccc
Q 003302 40 LRSSHAVLDLCAAP-GGWMQVAVQRVPVGSLVLGLDLVPIA----PIRGAV-SLEQDITKPECRARVKKVMEEHGVRAFD 113 (832)
Q Consensus 40 l~~g~~VLDLGcGP-Gg~sq~La~~~p~~~~ViGVDLsp~~----~i~~V~-~i~gDIt~~~~~~~l~~~L~~~~~~~FD 113 (832)
+++|.+||-+|||+ |.++..+++.++ ...|+++|.++-. .--++. ++. ..+....+.+..... +.||
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~G-a~~Vi~~~~~~~~~~~a~~lGa~~vi~--~~~~~~~~~~~~~~~----gg~D 260 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCG-ASIIIAVDIVESRLELAKQLGATHVIN--SKTQDPVAAIKEITD----GGVN 260 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHHHHHTCSEEEE--TTTSCHHHHHHHHTT----SCEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHHHHHHcCCCEEec--CCccCHHHHHHHhcC----CCCc
Confidence 57899999999876 555555666553 2379999987521 001222 222 222222333333222 3579
Q ss_pred EEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 114 LVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 114 lVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
+|+.... + ...+..+..+|++||++++
T Consensus 261 ~vid~~g----~-------------~~~~~~~~~~l~~~G~iv~ 287 (371)
T 1f8f_A 261 FALESTG----S-------------PEILKQGVDALGILGKIAV 287 (371)
T ss_dssp EEEECSC----C-------------HHHHHHHHHTEEEEEEEEE
T ss_pred EEEECCC----C-------------HHHHHHHHHHHhcCCEEEE
Confidence 9986421 1 1234567899999999987
No 336
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=88.98 E-value=3.5 Score=42.68 Aligned_cols=114 Identities=12% Similarity=0.110 Sum_probs=66.6
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
.+.+||=.|++ ||++..++..+ ..+..|+.++..... .-..+.++++|+++......+...+... .
T Consensus 30 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~ 107 (271)
T 3v2g_A 30 AGKTAFVTGGS-RGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA-L 107 (271)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH-c
Confidence 46788888876 45555544433 236688888765411 1235788999999987554444333221 2
Q ss_pred CcccEEEeCCCCCCCCC-c--hhHHhHH-----hHHHHHHHHHHHhhcccCcEEEE
Q 003302 110 RAFDLVLHDGSPNVGGA-W--AQEAMSQ-----NALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 110 ~~FDlVlsDgapnv~g~-w--~~D~~~q-----~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
+.+|+|+++......+. + ..+.+.. ..-...+++.+...|+++|.+|+
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~ 163 (271)
T 3v2g_A 108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIIT 163 (271)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEE
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEE
Confidence 57799999986432221 1 1122211 11123455667778888999886
No 337
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=88.87 E-value=2.6 Score=42.74 Aligned_cols=77 Identities=17% Similarity=0.176 Sum_probs=47.6
Q ss_pred CCEEEEEcCCcCHHHHHHHHhCC-CCC-EEEEEeCCCCC----------CCCCceEEEccCCCh-hHHHHHHHHHhhccC
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRVP-VGS-LVLGLDLVPIA----------PIRGAVSLEQDITKP-ECRARVKKVMEEHGV 109 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~p-~~~-~ViGVDLsp~~----------~i~~V~~i~gDIt~~-~~~~~l~~~L~~~~~ 109 (832)
+.+||=.|+ +|+++..++..+- .+. .|+.++.++-. +-.++.++.+|+++. .....+...+... .
T Consensus 5 ~k~vlVtGa-s~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 82 (254)
T 1sby_A 5 NKNVIFVAA-LGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ-L 82 (254)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH-H
T ss_pred CcEEEEECC-CChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHh-c
Confidence 567887776 5788777766543 234 38888876521 112578899999986 4333333222211 1
Q ss_pred CcccEEEeCCCC
Q 003302 110 RAFDLVLHDGSP 121 (832)
Q Consensus 110 ~~FDlVlsDgap 121 (832)
+.+|+|+++...
T Consensus 83 g~id~lv~~Ag~ 94 (254)
T 1sby_A 83 KTVDILINGAGI 94 (254)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 567999999764
No 338
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=88.78 E-value=1.9 Score=43.83 Aligned_cols=78 Identities=12% Similarity=0.137 Sum_probs=49.7
Q ss_pred CCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCC------CCCCCceEEEccCCChhHHHHHHHHHhhccCCcccEE
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPI------APIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV 115 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~------~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlV 115 (832)
+.+||=.|++ ||++..++..+ ..+..|+.++.++- ..++++.++++|+++......+...+... .+.+|+|
T Consensus 2 ~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~id~l 79 (247)
T 3dii_A 2 NRGVIVTGGG-HGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEK-LQRIDVL 79 (247)
T ss_dssp CCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHH-HSCCCEE
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeEEeeCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence 3567767755 55665554433 23678999998752 23567889999999986555444433221 2567999
Q ss_pred EeCCCCC
Q 003302 116 LHDGSPN 122 (832)
Q Consensus 116 lsDgapn 122 (832)
+++....
T Consensus 80 v~nAg~~ 86 (247)
T 3dii_A 80 VNNACRG 86 (247)
T ss_dssp EECCC-C
T ss_pred EECCCCC
Confidence 9998543
No 339
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=88.48 E-value=1.8 Score=44.34 Aligned_cols=79 Identities=14% Similarity=0.139 Sum_probs=49.0
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCC---------CC---CCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPI---------AP---IRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~---------~~---i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
.+.+||=.|++ |+++..++..+ ..+..|++++.++- .. -.++.++.+|+++......+...+...
T Consensus 6 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~- 83 (267)
T 2gdz_A 6 NGKVALVTGAA-QGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH- 83 (267)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH-
T ss_pred CCCEEEEECCC-CcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH-
Confidence 35678877764 56665555433 23568999987641 11 124788999999976554443333221
Q ss_pred CCcccEEEeCCCCC
Q 003302 109 VRAFDLVLHDGSPN 122 (832)
Q Consensus 109 ~~~FDlVlsDgapn 122 (832)
.+.+|+|+++....
T Consensus 84 ~g~id~lv~~Ag~~ 97 (267)
T 2gdz_A 84 FGRLDILVNNAGVN 97 (267)
T ss_dssp HSCCCEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 25679999998643
No 340
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=88.35 E-value=0.81 Score=49.09 Aligned_cols=94 Identities=15% Similarity=0.149 Sum_probs=57.0
Q ss_pred CCCCCEEEEEcCCc-CHHHHHHHHhCCCCCEEEEEeCCCCC----CCCCce-EEEccCCChhHHHHHHHHHhhccCCccc
Q 003302 40 LRSSHAVLDLCAAP-GGWMQVAVQRVPVGSLVLGLDLVPIA----PIRGAV-SLEQDITKPECRARVKKVMEEHGVRAFD 113 (832)
Q Consensus 40 l~~g~~VLDLGcGP-Gg~sq~La~~~p~~~~ViGVDLsp~~----~i~~V~-~i~gDIt~~~~~~~l~~~L~~~~~~~FD 113 (832)
+++|.+||=+|||+ |.++..+++.++ +..|+++|.++-. .--++. ++.. .+ ...+.+.....+ ..||
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g-~~~Vi~~~~~~~~~~~~~~lGa~~~i~~--~~-~~~~~v~~~t~g---~g~d 241 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVS-AARVIAVDLDDDRLALAREVGADAAVKS--GA-GAADAIRELTGG---QGAT 241 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESCHHHHHHHHHTTCSEEEEC--ST-THHHHHHHHHGG---GCEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHHHcCCCEEEcC--CC-cHHHHHHHHhCC---CCCe
Confidence 57899999999865 445555565553 5699999988621 111222 2222 22 233445444433 3579
Q ss_pred EEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 114 LVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 114 lVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
+|+-.. ++ ...+..+..+|++||++++
T Consensus 242 ~v~d~~----G~-------------~~~~~~~~~~l~~~G~iv~ 268 (345)
T 3jv7_A 242 AVFDFV----GA-------------QSTIDTAQQVVAVDGHISV 268 (345)
T ss_dssp EEEESS----CC-------------HHHHHHHHHHEEEEEEEEE
T ss_pred EEEECC----CC-------------HHHHHHHHHHHhcCCEEEE
Confidence 999642 11 1234567899999999987
No 341
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=88.15 E-value=0.71 Score=49.44 Aligned_cols=93 Identities=15% Similarity=0.023 Sum_probs=57.1
Q ss_pred CCCCCEEEEEcCCc-CHHHHHHHHhCCCCCEEEEEeCCCCC----CCCCceEEEccCCChhHHHHHHHHHhhccCCcccE
Q 003302 40 LRSSHAVLDLCAAP-GGWMQVAVQRVPVGSLVLGLDLVPIA----PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114 (832)
Q Consensus 40 l~~g~~VLDLGcGP-Gg~sq~La~~~p~~~~ViGVDLsp~~----~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDl 114 (832)
+++|.+||-+|||+ |.++..+++.++ ..|++++.++-. .--+...+ .|..+......+.. .. +.+|+
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~lGa~~~-i~~~~~~~~~~~~~-~~----g~~d~ 235 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAMG--LRVAAVDIDDAKLNLARRLGAEVA-VNARDTDPAAWLQK-EI----GGAHG 235 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHTTCSEE-EETTTSCHHHHHHH-HH----SSEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHHcCCCEE-EeCCCcCHHHHHHH-hC----CCCCE
Confidence 57899999999977 666777777764 599999987621 11122211 12333333333443 11 45799
Q ss_pred EEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 115 VlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
|+.... + ...+..+..+|++||++++
T Consensus 236 vid~~g----~-------------~~~~~~~~~~l~~~G~iv~ 261 (340)
T 3s2e_A 236 VLVTAV----S-------------PKAFSQAIGMVRRGGTIAL 261 (340)
T ss_dssp EEESSC----C-------------HHHHHHHHHHEEEEEEEEE
T ss_pred EEEeCC----C-------------HHHHHHHHHHhccCCEEEE
Confidence 886521 1 1234567899999999987
No 342
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=88.12 E-value=0.34 Score=55.40 Aligned_cols=77 Identities=16% Similarity=0.127 Sum_probs=48.7
Q ss_pred CCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC------C---CCCceEEEccCCChhHH-------HHHHHHHhh
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA------P---IRGAVSLEQDITKPECR-------ARVKKVMEE 106 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~------~---i~~V~~i~gDIt~~~~~-------~~l~~~L~~ 106 (832)
..+||||+||.||++.-+... + .-.|++||+++.. . .|+..++++||++.... ..+...+..
T Consensus 88 ~~~viDLFaG~GGlslG~~~a-G-~~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~~ 165 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI-G-GQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHQEGVSDEAAAEHIRQ 165 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT-T-EEEEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHHHHCTTCTTSCHHHHHHHHHH
T ss_pred cceEEEecCCccHHHHHHHHC-C-CEEEEEEeCCHHHHHHHHHhcccCCCcceeccchhhhhhccccccchhhHHhhhhh
Confidence 357999999999999877653 2 2358999999732 1 26677888999875310 011111111
Q ss_pred ccCCcccEEEeCCCCC
Q 003302 107 HGVRAFDLVLHDGSPN 122 (832)
Q Consensus 107 ~~~~~FDlVlsDgapn 122 (832)
....+|+|+..++|.
T Consensus 166 -~~~~~Dvl~gGpPCQ 180 (482)
T 3me5_A 166 -HIPEHDVLLAGFPCQ 180 (482)
T ss_dssp -HSCCCSEEEEECCCC
T ss_pred -cCCCCCEEEecCCCc
Confidence 114579999876543
No 343
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=88.02 E-value=4.6 Score=41.47 Aligned_cols=79 Identities=15% Similarity=0.158 Sum_probs=50.2
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC----------------------CCCCceEEEccCCChhHHH
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA----------------------PIRGAVSLEQDITKPECRA 98 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~----------------------~i~~V~~i~gDIt~~~~~~ 98 (832)
.+.+||=.|++ ||++..++..+ ..+..|+.+|.+.-. .-..+.++++|+++.....
T Consensus 12 ~gk~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~ 90 (278)
T 3sx2_A 12 TGKVAFITGAA-RGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLS 90 (278)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence 46788878865 55555544433 236789999886210 0135888999999987655
Q ss_pred HHHHHHhhccCCcccEEEeCCCCC
Q 003302 99 RVKKVMEEHGVRAFDLVLHDGSPN 122 (832)
Q Consensus 99 ~l~~~L~~~~~~~FDlVlsDgapn 122 (832)
.+...+... ++.+|+|+++....
T Consensus 91 ~~~~~~~~~-~g~id~lv~nAg~~ 113 (278)
T 3sx2_A 91 AALQAGLDE-LGRLDIVVANAGIA 113 (278)
T ss_dssp HHHHHHHHH-HCCCCEEEECCCCC
T ss_pred HHHHHHHHH-cCCCCEEEECCCCC
Confidence 444433221 25679999998644
No 344
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=88.02 E-value=4.6 Score=41.15 Aligned_cols=79 Identities=16% Similarity=0.143 Sum_probs=49.6
Q ss_pred CCCEEEEEcC-CcCHHHHHHHHh-CCCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 42 SSHAVLDLCA-APGGWMQVAVQR-VPVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 42 ~g~~VLDLGc-GPGg~sq~La~~-~p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
.+.+||=.|+ |.|. +..++.. ...+..|+.++.+.-. ...++.++++|+++......+...+...
T Consensus 21 ~~k~vlITGasg~GI-G~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~- 98 (266)
T 3o38_A 21 KGKVVLVTAAAGTGI-GSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEK- 98 (266)
T ss_dssp TTCEEEESSCSSSSH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred CCCEEEEECCCCCch-HHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHH-
Confidence 4678887887 4543 3333322 2236789999877411 1246889999999987655444433322
Q ss_pred CCcccEEEeCCCCC
Q 003302 109 VRAFDLVLHDGSPN 122 (832)
Q Consensus 109 ~~~FDlVlsDgapn 122 (832)
.+.+|+|+++....
T Consensus 99 ~g~id~li~~Ag~~ 112 (266)
T 3o38_A 99 AGRLDVLVNNAGLG 112 (266)
T ss_dssp HSCCCEEEECCCCC
T ss_pred hCCCcEEEECCCcC
Confidence 25679999998643
No 345
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=87.86 E-value=0.99 Score=48.72 Aligned_cols=95 Identities=19% Similarity=0.177 Sum_probs=54.9
Q ss_pred CCCCCEEEEEcCCc-CHHHHHHHHhCCCCCEEEEEeCCCCC----CCCCceEEEccCC--C-hhHHHHHHHHHhhccCCc
Q 003302 40 LRSSHAVLDLCAAP-GGWMQVAVQRVPVGSLVLGLDLVPIA----PIRGAVSLEQDIT--K-PECRARVKKVMEEHGVRA 111 (832)
Q Consensus 40 l~~g~~VLDLGcGP-Gg~sq~La~~~p~~~~ViGVDLsp~~----~i~~V~~i~gDIt--~-~~~~~~l~~~L~~~~~~~ 111 (832)
+++|.+||-+|||+ |.++..+++.++ ...|++++.++-. .--++..+ .|.. + ......+..... ..
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~~i~~~~~----~g 242 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAMG-AAQVVVTDLSATRLSKAKEIGADLV-LQISKESPQEIARKVEGQLG----CK 242 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHHHTTCSEE-EECSSCCHHHHHHHHHHHHT----SC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHhCCCEE-EcCcccccchHHHHHHHHhC----CC
Confidence 57899999999865 555555666654 2389999987521 11122211 1222 1 222333333221 35
Q ss_pred ccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 112 FDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 112 FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
||+|+.... + . ..+..+.++|++||++++
T Consensus 243 ~D~vid~~g----~---~----------~~~~~~~~~l~~~G~iv~ 271 (356)
T 1pl8_A 243 PEVTIECTG----A---E----------ASIQAGIYATRSGGTLVL 271 (356)
T ss_dssp CSEEEECSC----C---H----------HHHHHHHHHSCTTCEEEE
T ss_pred CCEEEECCC----C---h----------HHHHHHHHHhcCCCEEEE
Confidence 799996421 1 1 134467889999999987
No 346
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=87.80 E-value=0.59 Score=48.53 Aligned_cols=65 Identities=12% Similarity=0.175 Sum_probs=41.7
Q ss_pred ceEEEccCCChhHHHHHHHHHhhccCCcccEEEeCCCCCCC-CCc----hhHHhHHhHHHHHHHHHHHhhcccCcEEEEE
Q 003302 84 AVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVG-GAW----AQEAMSQNALVIDSVKLATQFLAPKGTFVTK 158 (832)
Q Consensus 84 V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsDgapnv~-g~w----~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~K 158 (832)
..++++|... .+. .+.. ++||+|++||+.+.+ ..| ..+.+ ...+...|..+.++|+|||.+++.
T Consensus 5 ~~l~~gD~~~-----~l~-~l~~---~~vdlI~~DPPY~~~~~~~d~~~~~~~y--~~~~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 5 NKIHQMNCFD-----FLD-QVEN---KSVQLAVIDPPYNLSKADWDSFDSHNEF--LAFTYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp SSEEECCHHH-----HHH-HSCT---TCEEEEEECCCCSSCSSGGGCCSSHHHH--HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CeEEechHHH-----HHH-hccc---cccCEEEECCCCCCCcccccccCCHHHH--HHHHHHHHHHHHHHhcCCeEEEEE
Confidence 3467787653 122 2332 678999999987655 222 11222 234567788889999999999885
Q ss_pred E
Q 003302 159 V 159 (832)
Q Consensus 159 V 159 (832)
+
T Consensus 74 ~ 74 (260)
T 1g60_A 74 N 74 (260)
T ss_dssp E
T ss_pred c
Confidence 4
No 347
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=87.76 E-value=1.8 Score=42.30 Aligned_cols=100 Identities=18% Similarity=0.093 Sum_probs=64.2
Q ss_pred CEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC----CCCCceEEEccCCChhHHHHHHHHHhhccCCcccEEEeCC
Q 003302 44 HAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA----PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDG 119 (832)
Q Consensus 44 ~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~----~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsDg 119 (832)
.-|||||-|.|----+|...+| +..|+.+|-.--. ..|.-.+++|||... .......++ ...-++.+|.
T Consensus 42 GpVlElGLGNGRTydHLRe~~P-~R~I~vfDR~~~~hp~~~P~~e~~ilGdi~~t--L~~~~~r~g----~~a~LaHaD~ 114 (174)
T 3iht_A 42 GPVYELGLGNGRTYHHLRQHVQ-GREIYVFERAVASHPDSTPPEAQLILGDIRET--LPATLERFG----ATASLVHADL 114 (174)
T ss_dssp SCEEEECCTTCHHHHHHHHHCC-SSCEEEEESSCCCCGGGCCCGGGEEESCHHHH--HHHHHHHHC----SCEEEEEECC
T ss_pred CceEEecCCCChhHHHHHHhCC-CCcEEEEEeeeccCCCCCCchHheecccHHHH--HHHHHHhcC----CceEEEEeec
Confidence 4599999999999999999998 6789999987432 123356789998752 222222232 3336777774
Q ss_pred CCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 120 SPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 120 apnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
. ++....|.... .-+--++..+|.|||.+|.
T Consensus 115 G---~g~~~~d~a~a----~~lsplI~~~la~GGi~vS 145 (174)
T 3iht_A 115 G---GHNREKNDRFA----RLISPLIEPHLAQGGLMVS 145 (174)
T ss_dssp C---CSCHHHHHHHH----HHHHHHHGGGEEEEEEEEE
T ss_pred C---CCCcchhHHHH----HhhhHHHHHHhcCCcEEEe
Confidence 2 23333333321 1122356789999999986
No 348
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=87.69 E-value=4.9 Score=41.26 Aligned_cols=114 Identities=9% Similarity=0.059 Sum_probs=66.7
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC------------C-CCCceEEEccCCChhHHHHHHHHHhhc
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA------------P-IRGAVSLEQDITKPECRARVKKVMEEH 107 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~------------~-i~~V~~i~gDIt~~~~~~~l~~~L~~~ 107 (832)
.+.+||=.|++ ||++..++..+ ..+..|+.++..... . -.++.++++|+++......+...+...
T Consensus 10 ~~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 88 (262)
T 3ksu_A 10 KNKVIVIAGGI-KNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKE 88 (262)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 46788878876 55666555544 446788888765311 1 134788999999987655554443322
Q ss_pred cCCcccEEEeCCCCCCCCC-c--hhHHhHH---h--HHHHHHHHHHHhhcccCcEEEE
Q 003302 108 GVRAFDLVLHDGSPNVGGA-W--AQEAMSQ---N--ALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 108 ~~~~FDlVlsDgapnv~g~-w--~~D~~~q---~--~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
.+.+|+|+++......+. + ..+.+.. . .-....++.+...|+++|.+|+
T Consensus 89 -~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~ 145 (262)
T 3ksu_A 89 -FGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIIT 145 (262)
T ss_dssp -HCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred -cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEE
Confidence 257899999986433222 1 1122211 1 1123445566677778888876
No 349
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=87.60 E-value=1.3 Score=45.38 Aligned_cols=114 Identities=15% Similarity=0.075 Sum_probs=66.3
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC------C-CCCceEEEccCCChhHHHHHHHHHhhccCCccc
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA------P-IRGAVSLEQDITKPECRARVKKVMEEHGVRAFD 113 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~------~-i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FD 113 (832)
.+.+||=.|++ ||++..++..+ ..+..|+.++.++-. . -.++.++++|+++......+...+... .+.+|
T Consensus 7 ~gk~~lVTGas-~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~id 84 (255)
T 4eso_A 7 QGKKAIVIGGT-HGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQT-LGAID 84 (255)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHH-HSSEE
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHH-hCCCC
Confidence 36788878866 45555554433 236789999887521 1 135788999999987655444433221 26789
Q ss_pred EEEeCCCCCCCCC-c--hhHHhHH---h--HHHHHHHHHHHhhcccCcEEEE
Q 003302 114 LVLHDGSPNVGGA-W--AQEAMSQ---N--ALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 114 lVlsDgapnv~g~-w--~~D~~~q---~--~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
+|+++......+. + ..+.+.. . .-....++.+...|+.+|.+|.
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~ 136 (255)
T 4eso_A 85 LLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVF 136 (255)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEE
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEE
Confidence 9999975432221 1 1121111 0 1123345556667778898876
No 350
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=87.47 E-value=3.1 Score=42.85 Aligned_cols=78 Identities=14% Similarity=0.086 Sum_probs=52.6
Q ss_pred CCEEEEEcCC-cCHHHHHHHHhC-CCCCEEEEEeCCCCC---------CCCCceEEEccCCChhHHHHHHHHHhhccCCc
Q 003302 43 SHAVLDLCAA-PGGWMQVAVQRV-PVGSLVLGLDLVPIA---------PIRGAVSLEQDITKPECRARVKKVMEEHGVRA 111 (832)
Q Consensus 43 g~~VLDLGcG-PGg~sq~La~~~-p~~~~ViGVDLsp~~---------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~ 111 (832)
+.+||=.|++ +||++..++..+ ..+..|+.++.++-. ...++.++.+|+++......+...+... .+.
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~g~ 84 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD-LGS 84 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH-TSC
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHH-cCC
Confidence 5788888986 477777666544 336789999887531 1234788999999987555444433321 267
Q ss_pred ccEEEeCCCC
Q 003302 112 FDLVLHDGSP 121 (832)
Q Consensus 112 FDlVlsDgap 121 (832)
+|+|+++...
T Consensus 85 id~lv~nAg~ 94 (275)
T 2pd4_A 85 LDFIVHSVAF 94 (275)
T ss_dssp EEEEEECCCC
T ss_pred CCEEEECCcc
Confidence 8999999864
No 351
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=87.43 E-value=2.8 Score=42.61 Aligned_cols=116 Identities=9% Similarity=-0.017 Sum_probs=69.2
Q ss_pred CCCCEEEEEcCC-cCHHHHHHHHhC-CCCCEEEEEeCCCCC---------CCCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 41 RSSHAVLDLCAA-PGGWMQVAVQRV-PVGSLVLGLDLVPIA---------PIRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 41 ~~g~~VLDLGcG-PGg~sq~La~~~-p~~~~ViGVDLsp~~---------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
.++.+||=.|++ +||++..++..+ ..+..|+.++.+.-. ..+.+.++.+|+++......+...+... .
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~ 90 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTH-W 90 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH-C
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHH-c
Confidence 357889988985 466666555443 235689999877421 1345889999999987655555444332 2
Q ss_pred CcccEEEeCCCCCCC-----CCc---hhHHhHHh-----HHHHHHHHHHHhhcccCcEEEE
Q 003302 110 RAFDLVLHDGSPNVG-----GAW---AQEAMSQN-----ALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 110 ~~FDlVlsDgapnv~-----g~w---~~D~~~q~-----~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
+.+|+|+++...... ..+ ..+.+... .-...+++.+...|+++|.+|+
T Consensus 91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~ 151 (271)
T 3ek2_A 91 DSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLT 151 (271)
T ss_dssp SCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEE
T ss_pred CCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEE
Confidence 678999999864321 111 11212110 0123345556667777888876
No 352
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=87.33 E-value=3.5 Score=43.95 Aligned_cols=72 Identities=18% Similarity=0.102 Sum_probs=49.3
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCC---CCCEEEEEeCCCC------------C-----CCCCceEEEccCCChhHHHHHH
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVP---VGSLVLGLDLVPI------------A-----PIRGAVSLEQDITKPECRARVK 101 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p---~~~~ViGVDLsp~------------~-----~i~~V~~i~gDIt~~~~~~~l~ 101 (832)
.+++||=.| |+|+++.+++..+- .+..|++++..+- . .-.++.++.+|+++......+
T Consensus 9 ~~~~vlVTG-atG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~- 86 (362)
T 3sxp_A 9 ENQTILITG-GAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRL- 86 (362)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHH-
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHh-
Confidence 467888666 67888887766553 3679999987542 1 113578999999997654332
Q ss_pred HHHhhccCCcccEEEeCCCC
Q 003302 102 KVMEEHGVRAFDLVLHDGSP 121 (832)
Q Consensus 102 ~~L~~~~~~~FDlVlsDgap 121 (832)
. ...+|+|++.+++
T Consensus 87 ---~---~~~~D~vih~A~~ 100 (362)
T 3sxp_A 87 ---E---KLHFDYLFHQAAV 100 (362)
T ss_dssp ---T---TSCCSEEEECCCC
T ss_pred ---h---ccCCCEEEECCcc
Confidence 1 2567999999864
No 353
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=87.21 E-value=5.2 Score=41.32 Aligned_cols=79 Identities=15% Similarity=0.177 Sum_probs=50.0
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC--------------------------CCCCceEEEccCCCh
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA--------------------------PIRGAVSLEQDITKP 94 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~--------------------------~i~~V~~i~gDIt~~ 94 (832)
.+.+||=.|++. |++..++..+ ..+..|+.+|.++-. .-..+.++++|+++.
T Consensus 10 ~~k~~lVTGas~-gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 88 (286)
T 3uve_A 10 EGKVAFVTGAAR-GQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDY 88 (286)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred CCCEEEEeCCCc-hHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCH
Confidence 367888788765 4554444433 236789999886210 113578899999998
Q ss_pred hHHHHHHHHHhhccCCcccEEEeCCCCC
Q 003302 95 ECRARVKKVMEEHGVRAFDLVLHDGSPN 122 (832)
Q Consensus 95 ~~~~~l~~~L~~~~~~~FDlVlsDgapn 122 (832)
.....+...+... .+.+|+|+++....
T Consensus 89 ~~v~~~~~~~~~~-~g~id~lv~nAg~~ 115 (286)
T 3uve_A 89 DALKAAVDSGVEQ-LGRLDIIVANAGIG 115 (286)
T ss_dssp HHHHHHHHHHHHH-HSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHH-hCCCCEEEECCccc
Confidence 7655444433221 25679999998643
No 354
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=87.16 E-value=3.3 Score=44.54 Aligned_cols=74 Identities=18% Similarity=0.037 Sum_probs=47.5
Q ss_pred CCEEEEEcCCcCHHHHHHHHhCC--CCCEEEEEeCCCCCC------------------------CCC---ceEEEccCCC
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRVP--VGSLVLGLDLVPIAP------------------------IRG---AVSLEQDITK 93 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~p--~~~~ViGVDLsp~~~------------------------i~~---V~~i~gDIt~ 93 (832)
+++||=.| |+|+++.+++..+- .+..|++++..+-.. ..+ +.++.+|+++
T Consensus 2 ~m~vlVTG-atG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d 80 (397)
T 1gy8_A 2 HMRVLVCG-GAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRN 80 (397)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTC
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCC
Confidence 46777666 56788777765442 456899998764221 124 8899999999
Q ss_pred hhHHHHHHHHHhhccCCcccEEEeCCCCC
Q 003302 94 PECRARVKKVMEEHGVRAFDLVLHDGSPN 122 (832)
Q Consensus 94 ~~~~~~l~~~L~~~~~~~FDlVlsDgapn 122 (832)
..... ..+... +.+|+|+|.+++.
T Consensus 81 ~~~~~---~~~~~~--~~~d~vih~A~~~ 104 (397)
T 1gy8_A 81 EDFLN---GVFTRH--GPIDAVVHMCAFL 104 (397)
T ss_dssp HHHHH---HHHHHS--CCCCEEEECCCCC
T ss_pred HHHHH---HHHHhc--CCCCEEEECCCcc
Confidence 76433 333321 3369999997643
No 355
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=87.16 E-value=3.6 Score=42.47 Aligned_cols=114 Identities=15% Similarity=0.124 Sum_probs=63.9
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
.+.+||=.|++. |++..++..+ ..+..|+.++..... .-..+.++++|+++......+...+... .
T Consensus 26 ~~k~~lVTGas~-GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~ 103 (267)
T 3u5t_A 26 TNKVAIVTGASR-GIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEA-F 103 (267)
T ss_dssp -CCEEEEESCSS-HHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred CCCEEEEeCCCC-HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence 467888777665 4554444332 225678777543321 1235788999999987655444433322 2
Q ss_pred CcccEEEeCCCCCCCCC-c--hhHHhHH---h--HHHHHHHHHHHhhcccCcEEEE
Q 003302 110 RAFDLVLHDGSPNVGGA-W--AQEAMSQ---N--ALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 110 ~~FDlVlsDgapnv~g~-w--~~D~~~q---~--~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
+.+|+|+++......+. + ..+.+.. . .-....++.+...|+++|.+|.
T Consensus 104 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~ 159 (267)
T 3u5t_A 104 GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIIN 159 (267)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEE
Confidence 67899999985432221 1 1111111 1 1123445566777888898876
No 356
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=87.16 E-value=2.1 Score=45.26 Aligned_cols=74 Identities=12% Similarity=0.108 Sum_probs=48.6
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCC---CCCEEEEEeCCCCC----------CCCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVP---VGSLVLGLDLVPIA----------PIRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p---~~~~ViGVDLsp~~----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
.+++||=.| |+|.++.+++..+- ....|++++..+.. ..+++.++.+|+++..... ..+..
T Consensus 23 ~~~~vlVtG-atG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~---~~~~~-- 96 (346)
T 4egb_A 23 NAMNILVTG-GAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLE---HVIKE-- 96 (346)
T ss_dssp -CEEEEEET-TTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHH---HHHHH--
T ss_pred CCCeEEEEC-CccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHH---HHHhh--
Confidence 457888676 56777776665442 23689999876521 1257999999999976433 33433
Q ss_pred CCcccEEEeCCCCC
Q 003302 109 VRAFDLVLHDGSPN 122 (832)
Q Consensus 109 ~~~FDlVlsDgapn 122 (832)
..+|+|++.+++.
T Consensus 97 -~~~d~Vih~A~~~ 109 (346)
T 4egb_A 97 -RDVQVIVNFAAES 109 (346)
T ss_dssp -HTCCEEEECCCCC
T ss_pred -cCCCEEEECCccc
Confidence 2359999988653
No 357
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=87.13 E-value=5 Score=41.18 Aligned_cols=79 Identities=16% Similarity=0.090 Sum_probs=51.5
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC-CCCCceEEEccCCChhHHHHHHHHHhhccCCcccEEEeCC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA-PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDG 119 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~-~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsDg 119 (832)
.+.+||=.|++ ||++..++..+ ..+..|++++.+.-. ....+.++++|++++.....+...+... .+.+|+|+++.
T Consensus 27 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g~iD~lv~nA 104 (260)
T 3un1_A 27 QQKVVVITGAS-QGIGAGLVRAYRDRNYRVVATSRSIKPSADPDIHTVAGDISKPETADRIVREGIER-FGRIDSLVNNA 104 (260)
T ss_dssp TCCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESSCCCCSSTTEEEEESCTTSHHHHHHHHHHHHHH-HSCCCEEEECC
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCChhhcccCceEEEEccCCCHHHHHHHHHHHHHH-CCCCCEEEECC
Confidence 35678866654 66666555443 236789999987633 2346889999999987555444333221 25779999998
Q ss_pred CCC
Q 003302 120 SPN 122 (832)
Q Consensus 120 apn 122 (832)
...
T Consensus 105 g~~ 107 (260)
T 3un1_A 105 GVF 107 (260)
T ss_dssp CCC
T ss_pred CCC
Confidence 643
No 358
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=87.10 E-value=2.6 Score=44.18 Aligned_cols=115 Identities=14% Similarity=0.062 Sum_probs=67.3
Q ss_pred CCCEEEEEcCCc-CHHHHHHHHhC-CCCCEEEEEeCCCCC---------CCCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 42 SSHAVLDLCAAP-GGWMQVAVQRV-PVGSLVLGLDLVPIA---------PIRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 42 ~g~~VLDLGcGP-Gg~sq~La~~~-p~~~~ViGVDLsp~~---------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
.+.+||=.|++. +|++..++..+ ..+..|+.++.+.-. ....+.++++|+++......+...+... .+
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g 107 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEE-WG 107 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence 367888889864 35554444332 236789999887521 1245788999999987655554443322 25
Q ss_pred cccEEEeCCCCCCC-----CCc--hhHHhHH-----hHHHHHHHHHHHhhcccCcEEEE
Q 003302 111 AFDLVLHDGSPNVG-----GAW--AQEAMSQ-----NALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 111 ~FDlVlsDgapnv~-----g~w--~~D~~~q-----~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
.+|+|+++...... ..+ ..+.+.. ..-...+++.+...|+.+|.+|+
T Consensus 108 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~ 166 (296)
T 3k31_A 108 SLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILT 166 (296)
T ss_dssp CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEE
T ss_pred CCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEE
Confidence 77999999864321 111 1111111 11123445566677778999886
No 359
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=87.00 E-value=6.6 Score=39.87 Aligned_cols=79 Identities=18% Similarity=0.188 Sum_probs=49.2
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC------CC-CCceEEEccCCChhHHHHHHHHHhhccCCccc
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA------PI-RGAVSLEQDITKPECRARVKKVMEEHGVRAFD 113 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~------~i-~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FD 113 (832)
.+.+||=.|++ ||++..++..+ ..+..|+.++.++-. .+ ..+.++++|+++......+...+... ++.+|
T Consensus 6 ~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~id 83 (257)
T 3tpc_A 6 KSRVFIVTGAS-SGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQE-FGHVH 83 (257)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHH-HSCCC
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH-cCCCC
Confidence 35778877776 55555554433 236689999887632 11 25788999999976555444433221 25779
Q ss_pred EEEeCCCCC
Q 003302 114 LVLHDGSPN 122 (832)
Q Consensus 114 lVlsDgapn 122 (832)
+|+++....
T Consensus 84 ~lv~nAg~~ 92 (257)
T 3tpc_A 84 GLVNCAGTA 92 (257)
T ss_dssp EEEECCCCC
T ss_pred EEEECCCCC
Confidence 999998643
No 360
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=86.84 E-value=6.4 Score=39.92 Aligned_cols=111 Identities=15% Similarity=0.099 Sum_probs=65.0
Q ss_pred CCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCCCCCCceEEEccCCChhHHHHHHHHHhhccCCcccEEEeCCCC
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsDgap 121 (832)
+.+||=.|++ |+++..++..+ ..+..|++++.++.... ...+..|+++......+...+.. ..+.+|+|++++..
T Consensus 22 ~k~vlITGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~--~~~~~~d~~d~~~v~~~~~~~~~-~~g~iD~li~~Ag~ 97 (251)
T 3orf_A 22 SKNILVLGGS-GALGAEVVKFFKSKSWNTISIDFRENPNA--DHSFTIKDSGEEEIKSVIEKINS-KSIKVDTFVCAAGG 97 (251)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSCCTTS--SEEEECSCSSHHHHHHHHHHHHT-TTCCEEEEEECCCC
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCccccc--ccceEEEeCCHHHHHHHHHHHHH-HcCCCCEEEECCcc
Confidence 5678877766 55666555443 23678999998864321 24567788887665555444432 23678999999864
Q ss_pred CCCCC----chhHHhHH-----hHHHHHHHHHHHhhcccCcEEEE
Q 003302 122 NVGGA----WAQEAMSQ-----NALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 122 nv~g~----w~~D~~~q-----~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
...+. ...+.+.. ..-...+++.+...++++|.||+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~ 142 (251)
T 3orf_A 98 WSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVL 142 (251)
T ss_dssp CCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEE
Confidence 32111 11121111 11123445666777888888886
No 361
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=86.78 E-value=0.95 Score=48.83 Aligned_cols=67 Identities=15% Similarity=0.175 Sum_probs=41.8
Q ss_pred ceEE-EccCCChhHHHHHHHHHhhccCCcccEEEeCCCCCCC-CCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEc
Q 003302 84 AVSL-EQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVG-GAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVF 160 (832)
Q Consensus 84 V~~i-~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsDgapnv~-g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVF 160 (832)
..++ ++|.... + ..+.. ++||+|++||+.+.+ +.|.. ...-...+...|..+.++|+|||.+++.+-
T Consensus 39 ~~l~i~gD~l~~-----L-~~l~~---~svDlI~tDPPY~~~~d~~~~-~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~ 107 (319)
T 1eg2_A 39 RHVYDVCDCLDT-----L-AKLPD---DSVQLIICDPPYNIMLADWDD-HMDYIGWAKRWLAEAERVLSPTGSIAIFGG 107 (319)
T ss_dssp EEEEEECCHHHH-----H-HTSCT---TCEEEEEECCCSBCCGGGGGT-CSSHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ceEEECCcHHHH-----H-HhCcc---CCcCEEEECCCCCCCCCCccC-HHHHHHHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 3455 8886542 2 22332 578999999976654 22320 111123456777888999999999998653
No 362
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=86.72 E-value=0.79 Score=50.25 Aligned_cols=110 Identities=14% Similarity=0.133 Sum_probs=57.9
Q ss_pred CCCCCEEEEEcCCc-CHHHHHHHHhCCCCCEEEEEeCCCCC----CCCCceEEEccCCChh-HHHHHHHHHhhccCCccc
Q 003302 40 LRSSHAVLDLCAAP-GGWMQVAVQRVPVGSLVLGLDLVPIA----PIRGAVSLEQDITKPE-CRARVKKVMEEHGVRAFD 113 (832)
Q Consensus 40 l~~g~~VLDLGcGP-Gg~sq~La~~~p~~~~ViGVDLsp~~----~i~~V~~i~gDIt~~~-~~~~l~~~L~~~~~~~FD 113 (832)
+++|.+||-+|||+ |.++..+++.++ ...|+++|.++-. .--++.++. .++.. ..+.+.....+ ..||
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~G-a~~Vi~~~~~~~~~~~a~~lGa~~i~--~~~~~~~~~~v~~~t~g---~g~D 256 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLLG-AAVVIVGDLNPARLAHAKAQGFEIAD--LSLDTPLHEQIAALLGE---PEVD 256 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHHHTTCEEEE--TTSSSCHHHHHHHHHSS---SCEE
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCC-CCeEEEEcCCHHHHHHHHHcCCcEEc--cCCcchHHHHHHHHhCC---CCCC
Confidence 57899999999866 555666666664 2379999988621 112444332 22211 23334433322 3579
Q ss_pred EEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 114 LVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 114 lVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
+|+-.......+ +..+...+ .-...++..+.++|++||++++
T Consensus 257 vvid~~G~~~~~-~~~~~~~~-~~~~~~~~~~~~~l~~~G~iv~ 298 (398)
T 1kol_A 257 CAVDAVGFEARG-HGHEGAKH-EAPATVLNSLMQVTRVAGKIGI 298 (398)
T ss_dssp EEEECCCTTCBC-SSTTGGGS-BCTTHHHHHHHHHEEEEEEEEE
T ss_pred EEEECCCCcccc-cccccccc-cchHHHHHHHHHHHhcCCEEEE
Confidence 998653210000 00000000 0001234567899999999986
No 363
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=86.72 E-value=5.1 Score=40.97 Aligned_cols=75 Identities=19% Similarity=0.258 Sum_probs=51.2
Q ss_pred CEEEEEcCCcCHHHHHHHHhCCC-CCEEEEEeCCCCCC-CCCceEEEccCCChhHHHHHHHHHhhccCCcccEEEeCCCC
Q 003302 44 HAVLDLCAAPGGWMQVAVQRVPV-GSLVLGLDLVPIAP-IRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121 (832)
Q Consensus 44 ~~VLDLGcGPGg~sq~La~~~p~-~~~ViGVDLsp~~~-i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsDgap 121 (832)
++||=.| |+|+++.+++..+.. +..|++++.++... ..++.++.+|+++..... ..+ ..+|+|+|+++.
T Consensus 4 k~vlVTG-asg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~---~~~-----~~~D~vi~~Ag~ 74 (267)
T 3rft_A 4 KRLLVTG-AAGQLGRVMRERLAPMAEILRLADLSPLDPAGPNEECVQCDLADANAVN---AMV-----AGCDGIVHLGGI 74 (267)
T ss_dssp EEEEEES-TTSHHHHHHHHHTGGGEEEEEEEESSCCCCCCTTEEEEECCTTCHHHHH---HHH-----TTCSEEEECCSC
T ss_pred CEEEEEC-CCCHHHHHHHHHHHhcCCEEEEEecCCccccCCCCEEEEcCCCCHHHHH---HHH-----cCCCEEEECCCC
Confidence 3566555 468888888877643 45799999887543 357899999999875433 333 245999999876
Q ss_pred CCCCCc
Q 003302 122 NVGGAW 127 (832)
Q Consensus 122 nv~g~w 127 (832)
.....|
T Consensus 75 ~~~~~~ 80 (267)
T 3rft_A 75 SVEKPF 80 (267)
T ss_dssp CSCCCH
T ss_pred cCcCCH
Confidence 433333
No 364
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=86.60 E-value=1.6 Score=46.98 Aligned_cols=98 Identities=15% Similarity=0.085 Sum_probs=56.9
Q ss_pred CCCCCEEEEEcCCc-CHHHHHHHHhCCCCCEEEEEeCCCCC-----CC-CCceEEEccCCC-hhHHHHHHHHHhhccCCc
Q 003302 40 LRSSHAVLDLCAAP-GGWMQVAVQRVPVGSLVLGLDLVPIA-----PI-RGAVSLEQDITK-PECRARVKKVMEEHGVRA 111 (832)
Q Consensus 40 l~~g~~VLDLGcGP-Gg~sq~La~~~p~~~~ViGVDLsp~~-----~i-~~V~~i~gDIt~-~~~~~~l~~~L~~~~~~~ 111 (832)
+++|.+||=+|||+ |.++..+++.++. ..|++++.++-. .+ ..+.....+-.+ ......+.....+ ..
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g---~g 252 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAAGA-CPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGG---IE 252 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHTTC-CSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSS---CC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCC---CC
Confidence 57889999899865 4455566666542 249999987521 11 233333333222 2333344433322 45
Q ss_pred ccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEE
Q 003302 112 FDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTK 158 (832)
Q Consensus 112 FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~K 158 (832)
||+|+-.. ++ . ..+..+..+|++||++++-
T Consensus 253 ~Dvvid~~----g~---~----------~~~~~~~~~l~~~G~iv~~ 282 (363)
T 3m6i_A 253 PAVALECT----GV---E----------SSIAAAIWAVKFGGKVFVI 282 (363)
T ss_dssp CSEEEECS----CC---H----------HHHHHHHHHSCTTCEEEEC
T ss_pred CCEEEECC----CC---h----------HHHHHHHHHhcCCCEEEEE
Confidence 79999642 11 1 2345678899999999973
No 365
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=86.44 E-value=4.4 Score=41.29 Aligned_cols=78 Identities=10% Similarity=0.018 Sum_probs=51.9
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC----------CCCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA----------PIRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
.+.+||=.|++ ||++..++..+ ..+..|+.++.++-. .-.++.++++|+++......+...+... +
T Consensus 6 ~~k~vlVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~--g 82 (252)
T 3h7a_A 6 RNATVAVIGAG-DYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH--A 82 (252)
T ss_dssp CSCEEEEECCS-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH--S
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh--C
Confidence 46778877776 45555554433 235689999887532 1135788999999987665555544433 6
Q ss_pred cccEEEeCCCCC
Q 003302 111 AFDLVLHDGSPN 122 (832)
Q Consensus 111 ~FDlVlsDgapn 122 (832)
.+|+|+++....
T Consensus 83 ~id~lv~nAg~~ 94 (252)
T 3h7a_A 83 PLEVTIFNVGAN 94 (252)
T ss_dssp CEEEEEECCCCC
T ss_pred CceEEEECCCcC
Confidence 789999998644
No 366
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=86.23 E-value=0.5 Score=51.31 Aligned_cols=95 Identities=18% Similarity=0.126 Sum_probs=56.4
Q ss_pred CCCCCEEEEEcCCc-CHHHHHHHHhCCCCCEEEEEeCCCCC----CCCCceEEEccCCChhHHHHHHHHHhhccCCcccE
Q 003302 40 LRSSHAVLDLCAAP-GGWMQVAVQRVPVGSLVLGLDLVPIA----PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114 (832)
Q Consensus 40 l~~g~~VLDLGcGP-Gg~sq~La~~~p~~~~ViGVDLsp~~----~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDl 114 (832)
+++|.+||=+|||+ |.++..+++.+ ++.|++++.++-. .--++..+. |-......+.+.....+ ..||+
T Consensus 187 ~~~g~~VlV~G~G~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~lGa~~vi-~~~~~~~~~~v~~~~~g---~g~D~ 260 (363)
T 3uog_A 187 LRAGDRVVVQGTGGVALFGLQIAKAT--GAEVIVTSSSREKLDRAFALGADHGI-NRLEEDWVERVYALTGD---RGADH 260 (363)
T ss_dssp CCTTCEEEEESSBHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTCSEEE-ETTTSCHHHHHHHHHTT---CCEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEecCchhHHHHHHcCCCEEE-cCCcccHHHHHHHHhCC---CCceE
Confidence 57899999999776 44555566665 4589999987521 001222111 22212333444444433 35799
Q ss_pred EEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEE
Q 003302 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTK 158 (832)
Q Consensus 115 VlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~K 158 (832)
|+.... +. .+..++.+|++||++++.
T Consensus 261 vid~~g----~~--------------~~~~~~~~l~~~G~iv~~ 286 (363)
T 3uog_A 261 ILEIAG----GA--------------GLGQSLKAVAPDGRISVI 286 (363)
T ss_dssp EEEETT----SS--------------CHHHHHHHEEEEEEEEEE
T ss_pred EEECCC----hH--------------HHHHHHHHhhcCCEEEEE
Confidence 996532 11 123577899999999974
No 367
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=86.20 E-value=1.5 Score=44.49 Aligned_cols=114 Identities=11% Similarity=0.016 Sum_probs=65.4
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCC--CCCEEEEEeCCCCC----------CCCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVP--VGSLVLGLDLVPIA----------PIRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p--~~~~ViGVDLsp~~----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
.+.+||=.| |+|+++..++..+- .+..|++++.++-. .-.++.++.+|+++......+...+... .
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~ 80 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKE-Y 80 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHh-c
Confidence 356777555 56778777766542 35689999876421 0135888999999976554444433221 2
Q ss_pred CcccEEEeCCCCCCCCCch---hHHhHH-----hHHHHHHHHHHHhhcccCcEEEE
Q 003302 110 RAFDLVLHDGSPNVGGAWA---QEAMSQ-----NALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 110 ~~FDlVlsDgapnv~g~w~---~D~~~q-----~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
+.+|+|+++++....+... .+.+.. ..-...+++.+...++++|.||+
T Consensus 81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~ 136 (276)
T 1wma_A 81 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVN 136 (276)
T ss_dssp SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEE
T ss_pred CCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEE
Confidence 5679999997543222110 111110 11123445556666777788775
No 368
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=86.19 E-value=4.1 Score=42.65 Aligned_cols=70 Identities=16% Similarity=0.052 Sum_probs=45.6
Q ss_pred CCEEEEEcCCcCHHHHHHHHhCCC---CCEEEEEeCCCC-------CC---CCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRVPV---GSLVLGLDLVPI-------AP---IRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~p~---~~~ViGVDLsp~-------~~---i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
+++||=.| |+|+++.+++..+-. +..|++++..+. .. .+++.++.+|+++..... ..+
T Consensus 3 ~m~vlVTG-atG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~---~~~----- 73 (336)
T 2hun_A 3 SMKLLVTG-GMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVK---ELV----- 73 (336)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHH---HHH-----
T ss_pred CCeEEEEC-CCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHH---HHh-----
Confidence 46677666 567887777655421 368999987531 11 246889999999975433 223
Q ss_pred CcccEEEeCCCC
Q 003302 110 RAFDLVLHDGSP 121 (832)
Q Consensus 110 ~~FDlVlsDgap 121 (832)
..+|+|+|.+++
T Consensus 74 ~~~d~vih~A~~ 85 (336)
T 2hun_A 74 RKVDGVVHLAAE 85 (336)
T ss_dssp HTCSEEEECCCC
T ss_pred hCCCEEEECCCC
Confidence 235999998764
No 369
>1vpt_A VP39; RNA CAP, poly(A) polymerase, methyltransferase; HET: SAM; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1vp3_A*
Probab=86.18 E-value=10 Score=40.98 Aligned_cols=149 Identities=16% Similarity=0.125 Sum_probs=87.2
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCC---CCCEEEEEeCCCC----CCCCCceEEEccCCChhHHHHHHHHHhhccCCcccE
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVP---VGSLVLGLDLVPI----APIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p---~~~~ViGVDLsp~----~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDl 114 (832)
+|..||=+|+|||.+..+|+...+ ...+.+.||..+. .+.++|++++. +++..+...++..+.+.. =+
T Consensus 75 ~g~~VVYaGsAPG~HI~fL~~lF~~l~~~lkwvLiDp~~f~~~Le~~~ni~li~~-ffde~~i~~l~~~~~~~~----vL 149 (348)
T 1vpt_A 75 DGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHHDPILNGLRDVTLVTR-FVDEEYLRSIKKQLHPSK----II 149 (348)
T ss_dssp TTCEEEEESCSSCHHHHHHHHHHHHTTCCCEEEEEESSCCCGGGTTCTTEEEEEC-CCCHHHHHHHHHHHTTSC----EE
T ss_pred CCCeEEEeCcCCcchHHHHHHHhhhcCCceEEEEECCCchhhhhcCCCcEEeehh-hcCHHHHHHHHHHhcCCC----EE
Confidence 467999999999999999988654 4578999999984 35677776654 667666666766665422 24
Q ss_pred EEeCCCCC-CCCC-chhHHhHHhHHHHHHHHHHHhhcccCcEEEEEEcCCCCHHHHHHHHHH-cccceEEecCCCCCCCC
Q 003302 115 VLHDGSPN-VGGA-WAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQ-LFEKVEVDKPAASRSAS 191 (832)
Q Consensus 115 VlsDgapn-v~g~-w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KVFrs~d~~~ll~~L~~-~F~~V~~~KP~sSR~~S 191 (832)
.+||-... .++. +..+...-. .+-...+.+|+|-..++ =||.+-..... .. +.-.-...=|+..+..|
T Consensus 150 fISDIRS~~~~~Ep~~~dll~Dy----~lQn~w~~iLkP~aSmL--KFRlPyp~~~~---~~~yi~dG~~~Lqvwap~tS 220 (348)
T 1vpt_A 150 LISDVASAAGGNEPSTADLLSNY----ALQNVMISILNPVASSL--KWRCPFPDQWI---KDFYIPHGNKMLQPFAPSYS 220 (348)
T ss_dssp EEECCCC------CCHHHHHHHH----HHHHHHHHHHCCSEEEE--EECCCCGGGCC---CCEEEECCEEECCTTCCTTC
T ss_pred EEEecccCCCCCCccHHHHHHHH----HHHHHHHHHhhhHHHhc--cccCCCCCCCC---CceEeeCCCEEecccCCCCc
Confidence 45665321 1111 222211111 22234568899987765 24433212110 11 11122333467777889
Q ss_pred cceeEEEeeccCC
Q 003302 192 AEIYLLGIKYKAP 204 (832)
Q Consensus 192 aEiyvVc~gfk~p 204 (832)
+|..+|+..-.+|
T Consensus 221 tE~RLvv~~~~~~ 233 (348)
T 1vpt_A 221 AEMRLLSIYTGEN 233 (348)
T ss_dssp CCEEEEEECCTTC
T ss_pred ceEEEEEecCCCC
Confidence 9998887665544
No 370
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=86.11 E-value=8.7 Score=39.22 Aligned_cols=76 Identities=20% Similarity=0.158 Sum_probs=49.6
Q ss_pred CCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCCCCCCceEEEccCCChhHHHHHHHHHhhccCCcccEEEeCCCC
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsDgap 121 (832)
+.+||=.|++ |+++..++..+ ..+..|+.++.++- ....+.++.+|+++......+...+.. ..+.+|+|+++...
T Consensus 21 ~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~-~~g~iD~lv~nAg~ 97 (253)
T 2nm0_A 21 SRSVLVTGGN-RGIGLAIARAFADAGDKVAITYRSGE-PPEGFLAVKCDITDTEQVEQAYKEIEE-THGPVEVLIANAGV 97 (253)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSSC-CCTTSEEEECCTTSHHHHHHHHHHHHH-HTCSCSEEEEECSC
T ss_pred CCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCChH-hhccceEEEecCCCHHHHHHHHHHHHH-HcCCCCEEEECCCC
Confidence 5678877765 56665555433 23568999887653 234588899999997655444433322 13677999998754
No 371
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=86.00 E-value=1.6 Score=46.63 Aligned_cols=95 Identities=16% Similarity=0.139 Sum_probs=55.7
Q ss_pred CCCCCEEEEEcCC--cCHHHHHHHHhCCCCCEEEEEeCCCCCC--C--CCceEEEccCCChhHHHHHHHHHhhccCCccc
Q 003302 40 LRSSHAVLDLCAA--PGGWMQVAVQRVPVGSLVLGLDLVPIAP--I--RGAVSLEQDITKPECRARVKKVMEEHGVRAFD 113 (832)
Q Consensus 40 l~~g~~VLDLGcG--PGg~sq~La~~~p~~~~ViGVDLsp~~~--i--~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FD 113 (832)
+++|.+||-+||| -|..+..+++.+ ++.|++++.++-.. . -+...+ .|..+......+.....+ ..||
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~lga~~~-~~~~~~~~~~~~~~~~~~---~g~D 215 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQIL--NFRLIAVTRNNKHTEELLRLGAAYV-IDTSTAPLYETVMELTNG---IGAD 215 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESSSTTHHHHHHHTCSEE-EETTTSCHHHHHHHHTTT---SCEE
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhCCCcEE-EeCCcccHHHHHHHHhCC---CCCc
Confidence 5789999999987 354555555554 45899999886421 0 122211 233333344445444332 3679
Q ss_pred EEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEE
Q 003302 114 LVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTK 158 (832)
Q Consensus 114 lVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~K 158 (832)
+|+.... + .. +..++.+|++||++|+.
T Consensus 216 vvid~~g----~----~~----------~~~~~~~l~~~G~iv~~ 242 (340)
T 3gms_A 216 AAIDSIG----G----PD----------GNELAFSLRPNGHFLTI 242 (340)
T ss_dssp EEEESSC----H----HH----------HHHHHHTEEEEEEEEEC
T ss_pred EEEECCC----C----hh----------HHHHHHHhcCCCEEEEE
Confidence 9997531 1 10 11234799999999973
No 372
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=85.97 E-value=0.8 Score=54.20 Aligned_cols=97 Identities=18% Similarity=0.274 Sum_probs=58.7
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-------CC----CCEEEEEeCCCCC---------------------------CCCC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-------PV----GSLVLGLDLVPIA---------------------------PIRG 83 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-------p~----~~~ViGVDLsp~~---------------------------~i~~ 83 (832)
+.-+|+|+|.|+|.-..++.+.. |. ..++|+|+..|+. ++++
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 44689999999999766554432 11 2479999997642 1123
Q ss_pred c------------eEEEccCCChhHHHHHHHHHhhcc---CCcccEEEeCC-CCCC-CCCchhHHhHHhHHHHHHHHHHH
Q 003302 84 A------------VSLEQDITKPECRARVKKVMEEHG---VRAFDLVLHDG-SPNV-GGAWAQEAMSQNALVIDSVKLAT 146 (832)
Q Consensus 84 V------------~~i~gDIt~~~~~~~l~~~L~~~~---~~~FDlVlsDg-apnv-~g~w~~D~~~q~~L~~~aLk~A~ 146 (832)
| +.+.||+.+ .|.... .+.||.++.|| +|.. ...|..+- +..+.
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~---------~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~----------~~~l~ 198 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNT---------LLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQL----------FNAMA 198 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHH---------HGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHH----------HHHHH
T ss_pred ceEEEecCCcEEEEEEccCHHH---------HHhhcccccCCceeEEEECCCCCCCChhhhhHHH----------HHHHH
Confidence 2 233455432 233221 25789999999 3332 23566543 33456
Q ss_pred hhcccCcEEEE
Q 003302 147 QFLAPKGTFVT 157 (832)
Q Consensus 147 ~~LkpGG~fV~ 157 (832)
++++|||+|.+
T Consensus 199 ~~~~~g~~~~t 209 (689)
T 3pvc_A 199 RMTRPGGTFST 209 (689)
T ss_dssp HHEEEEEEEEE
T ss_pred HHhCCCCEEEe
Confidence 79999999875
No 373
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=85.97 E-value=7.2 Score=40.18 Aligned_cols=79 Identities=15% Similarity=0.103 Sum_probs=50.8
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC--C---------------CCCceEEEccCCChhHHHHHHHH
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA--P---------------IRGAVSLEQDITKPECRARVKKV 103 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~--~---------------i~~V~~i~gDIt~~~~~~~l~~~ 103 (832)
.+.+||=.|++ ||++..++..+ ..+..|+.++.+... . -.++.++++|+++......+...
T Consensus 5 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 83 (274)
T 3e03_A 5 SGKTLFITGAS-RGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAA 83 (274)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHH
T ss_pred CCcEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence 46788878877 55555444433 235689999887531 1 12477899999998765555444
Q ss_pred HhhccCCcccEEEeCCCCC
Q 003302 104 MEEHGVRAFDLVLHDGSPN 122 (832)
Q Consensus 104 L~~~~~~~FDlVlsDgapn 122 (832)
+... .+.+|+|+++....
T Consensus 84 ~~~~-~g~iD~lvnnAG~~ 101 (274)
T 3e03_A 84 TVDT-FGGIDILVNNASAI 101 (274)
T ss_dssp HHHH-HSCCCEEEECCCCC
T ss_pred HHHH-cCCCCEEEECCCcc
Confidence 3322 25779999998643
No 374
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=85.79 E-value=2.8 Score=43.95 Aligned_cols=115 Identities=13% Similarity=0.068 Sum_probs=67.5
Q ss_pred CCCEEEEEcCCcC-HHHHHHHHhC-CCCCEEEEEeCCCCC---------CCCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 42 SSHAVLDLCAAPG-GWMQVAVQRV-PVGSLVLGLDLVPIA---------PIRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 42 ~g~~VLDLGcGPG-g~sq~La~~~-p~~~~ViGVDLsp~~---------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
.+.+||=.|++.| |++..++..+ ..+..|+.++.++-. ....+.++++|+++......+...+... ++
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g 108 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKK-WG 108 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHH-TS
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHh-cC
Confidence 4678898998754 3444443322 235689888877310 1246888999999987655555444332 26
Q ss_pred cccEEEeCCCCCC-----CCCc--hhHHhHH-----hHHHHHHHHHHHhhcccCcEEEE
Q 003302 111 AFDLVLHDGSPNV-----GGAW--AQEAMSQ-----NALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 111 ~FDlVlsDgapnv-----~g~w--~~D~~~q-----~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
.+|+|+++..... +..+ ..+.+.. ..-...+++.+...|+.+|.+|.
T Consensus 109 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~ 167 (293)
T 3grk_A 109 KLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILT 167 (293)
T ss_dssp CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEE
T ss_pred CCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEE
Confidence 7899999976432 1111 1111111 11123445666777788999886
No 375
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=85.78 E-value=5.9 Score=41.21 Aligned_cols=77 Identities=18% Similarity=0.164 Sum_probs=53.7
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCCCCCCceEEEccCCChhHHHHHHHHHhhccCCcccEEEeCCC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsDga 120 (832)
.|.++|=-|++.| ++..++..+ ..++.|+.++.+.....+...++++|+++......+...+.. .++++|+++++..
T Consensus 10 ~GK~alVTGas~G-IG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~-~~G~iDilVnnAG 87 (261)
T 4h15_A 10 RGKRALITAGTKG-AGAATVSLFLELGAQVLTTARARPEGLPEELFVEADLTTKEGCAIVAEATRQ-RLGGVDVIVHMLG 87 (261)
T ss_dssp TTCEEEESCCSSH-HHHHHHHHHHHTTCEEEEEESSCCTTSCTTTEEECCTTSHHHHHHHHHHHHH-HTSSCSEEEECCC
T ss_pred CCCEEEEeccCcH-HHHHHHHHHHHcCCEEEEEECCchhCCCcEEEEEcCCCCHHHHHHHHHHHHH-HcCCCCEEEECCC
Confidence 5788887776654 555444332 246799999998766666777899999998766555544433 2378899999864
No 376
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=85.71 E-value=8.2 Score=40.06 Aligned_cols=79 Identities=15% Similarity=0.097 Sum_probs=51.0
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC--C---------------CCCceEEEccCCChhHHHHHHHH
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA--P---------------IRGAVSLEQDITKPECRARVKKV 103 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~--~---------------i~~V~~i~gDIt~~~~~~~l~~~ 103 (832)
.+.+||=.|++ ||++..++..+ ..+..|+.++.+.-. . -.++.++++|+++......+...
T Consensus 8 ~~k~vlVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 86 (285)
T 3sc4_A 8 RGKTMFISGGS-RGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAK 86 (285)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence 46788878876 45555554433 346789999887531 1 13578899999998765544443
Q ss_pred HhhccCCcccEEEeCCCCC
Q 003302 104 MEEHGVRAFDLVLHDGSPN 122 (832)
Q Consensus 104 L~~~~~~~FDlVlsDgapn 122 (832)
+... .+.+|+|+++....
T Consensus 87 ~~~~-~g~id~lvnnAg~~ 104 (285)
T 3sc4_A 87 TVEQ-FGGIDICVNNASAI 104 (285)
T ss_dssp HHHH-HSCCSEEEECCCCC
T ss_pred HHHH-cCCCCEEEECCCCC
Confidence 3322 25779999998643
No 377
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=85.49 E-value=2.4 Score=46.03 Aligned_cols=95 Identities=13% Similarity=0.134 Sum_probs=55.4
Q ss_pred CCCCCEEEEEcCCc-CHHHHHHHHhCCCCCEEEEEeCCCCC----CCCCceEEEccCC--ChhHHHHHHHHHhhccCCcc
Q 003302 40 LRSSHAVLDLCAAP-GGWMQVAVQRVPVGSLVLGLDLVPIA----PIRGAVSLEQDIT--KPECRARVKKVMEEHGVRAF 112 (832)
Q Consensus 40 l~~g~~VLDLGcGP-Gg~sq~La~~~p~~~~ViGVDLsp~~----~i~~V~~i~gDIt--~~~~~~~l~~~L~~~~~~~F 112 (832)
+++|.+||=+|||+ |.++..+++.++ ...|+++|.++-. .--++..+ .|.. +....+.+..... +.|
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~G-a~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~i~~~~~----gg~ 264 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTAG-ASRIIGIDIDSKKYETAKKFGVNEF-VNPKDHDKPIQEVIVDLTD----GGV 264 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHHT-CSCEEEECSCTTHHHHHHTTTCCEE-ECGGGCSSCHHHHHHHHTT----SCB
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHHcCCcEE-EccccCchhHHHHHHHhcC----CCC
Confidence 57889999999865 445555565554 2379999988732 11133221 1222 2223333443322 367
Q ss_pred cEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccC-cEEEE
Q 003302 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPK-GTFVT 157 (832)
Q Consensus 113 DlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpG-G~fV~ 157 (832)
|+|+-.. ++ ..++..+..+|++| |++++
T Consensus 265 D~vid~~----g~-------------~~~~~~~~~~l~~g~G~iv~ 293 (378)
T 3uko_A 265 DYSFECI----GN-------------VSVMRAALECCHKGWGTSVI 293 (378)
T ss_dssp SEEEECS----CC-------------HHHHHHHHHTBCTTTCEEEE
T ss_pred CEEEECC----CC-------------HHHHHHHHHHhhccCCEEEE
Confidence 9999642 11 12345688999997 99987
No 378
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=85.24 E-value=9.9 Score=39.70 Aligned_cols=78 Identities=13% Similarity=0.113 Sum_probs=49.5
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC----------------------CCCCceEEEccCCChhHHH
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA----------------------PIRGAVSLEQDITKPECRA 98 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~----------------------~i~~V~~i~gDIt~~~~~~ 98 (832)
.+.+||=.|++. |++..++..+ ..+..|+.+|.++-. .-.++.++++|+++.....
T Consensus 27 ~gk~~lVTGas~-GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 105 (299)
T 3t7c_A 27 EGKVAFITGAAR-GQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ 105 (299)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEECCCC-HHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence 367888888765 4554444332 236789999876310 0135788999999987555
Q ss_pred HHHHHHhhccCCcccEEEeCCCC
Q 003302 99 RVKKVMEEHGVRAFDLVLHDGSP 121 (832)
Q Consensus 99 ~l~~~L~~~~~~~FDlVlsDgap 121 (832)
.+...+... .+.+|+|+++...
T Consensus 106 ~~~~~~~~~-~g~iD~lv~nAg~ 127 (299)
T 3t7c_A 106 AAVDDGVTQ-LGRLDIVLANAAL 127 (299)
T ss_dssp HHHHHHHHH-HSCCCEEEECCCC
T ss_pred HHHHHHHHH-hCCCCEEEECCCC
Confidence 444433221 2577999999754
No 379
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=85.23 E-value=7 Score=39.99 Aligned_cols=79 Identities=10% Similarity=0.012 Sum_probs=50.2
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCC------------CCCCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPI------------APIRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~------------~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
.+.+||=.|++. |++..++..+ ..+..|+.++.++- .+-.++.++++|+++......+...+...
T Consensus 7 ~~k~~lVTGas~-GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~- 84 (265)
T 3lf2_A 7 SEAVAVVTGGSS-GIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERT- 84 (265)
T ss_dssp TTCEEEEETCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred CCCEEEEeCCCC-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHH-
Confidence 467888788764 5555544433 23668999988742 11224888999999987555444433321
Q ss_pred CCcccEEEeCCCCC
Q 003302 109 VRAFDLVLHDGSPN 122 (832)
Q Consensus 109 ~~~FDlVlsDgapn 122 (832)
.+.+|+|+++....
T Consensus 85 ~g~id~lvnnAg~~ 98 (265)
T 3lf2_A 85 LGCASILVNNAGQG 98 (265)
T ss_dssp HCSCSEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 25679999998643
No 380
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=85.10 E-value=1.1 Score=47.82 Aligned_cols=96 Identities=17% Similarity=0.130 Sum_probs=57.2
Q ss_pred CCCCCEEEEEcCCcCH-HHHHHHHhCCCCCEEEEEeCCCCC----CCCCc-eEEEccCCChhHHHHHHHHHhhccCCccc
Q 003302 40 LRSSHAVLDLCAAPGG-WMQVAVQRVPVGSLVLGLDLVPIA----PIRGA-VSLEQDITKPECRARVKKVMEEHGVRAFD 113 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg-~sq~La~~~p~~~~ViGVDLsp~~----~i~~V-~~i~gDIt~~~~~~~l~~~L~~~~~~~FD 113 (832)
+++|.+||=+|||+++ ++..++..+. ++.|+++|.++-. ..-+. .++ |..+....+.+.....+ ..+|
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~-g~~Vi~~~~~~~r~~~~~~~Ga~~~i--~~~~~~~~~~v~~~t~g---~g~d 234 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVF-GAKVIAVDINQDKLNLAKKIGADVTI--NSGDVNPVDEIKKITGG---LGVQ 234 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTS-CCEEEEEESCHHHHHHHHHTTCSEEE--EC-CCCHHHHHHHHTTS---SCEE
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhC-CCEEEEEECcHHHhhhhhhcCCeEEE--eCCCCCHHHHhhhhcCC---CCce
Confidence 4789999999999865 3344444443 5799999988632 11122 222 33333344455554433 3457
Q ss_pred EEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEE
Q 003302 114 LVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTK 158 (832)
Q Consensus 114 lVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~K 158 (832)
+|+.+.. + ..++..+..+|++||++++.
T Consensus 235 ~~~~~~~----~-------------~~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 235 SAIVCAV----A-------------RIAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp EEEECCS----C-------------HHHHHHHHHTEEEEEEEEEC
T ss_pred EEEEecc----C-------------cchhheeheeecCCceEEEE
Confidence 7776531 1 12345678999999999873
No 381
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=85.04 E-value=4.3 Score=43.94 Aligned_cols=95 Identities=14% Similarity=0.146 Sum_probs=54.5
Q ss_pred CCCCCEEEEEcCCc-CHHHHHHHHhCCCCCEEEEEeCCCCC----CCCCceEEEccCCC--hhHHHHHHHHHhhccCCcc
Q 003302 40 LRSSHAVLDLCAAP-GGWMQVAVQRVPVGSLVLGLDLVPIA----PIRGAVSLEQDITK--PECRARVKKVMEEHGVRAF 112 (832)
Q Consensus 40 l~~g~~VLDLGcGP-Gg~sq~La~~~p~~~~ViGVDLsp~~----~i~~V~~i~gDIt~--~~~~~~l~~~L~~~~~~~F 112 (832)
+++|.+||-+|||+ |.++..+++.++ ...|++++.++-. .--++..+ .|..+ ......+..... +.|
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~~~~~~----~g~ 263 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSAG-AKRIIAVDLNPDKFEKAKVFGATDF-VNPNDHSEPISQVLSKMTN----GGV 263 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHHHTTCCEE-ECGGGCSSCHHHHHHHHHT----SCB
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHHHhCCceE-EeccccchhHHHHHHHHhC----CCC
Confidence 57889999999765 444455556653 2289999987632 11133221 12221 122333333222 357
Q ss_pred cEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccC-cEEEE
Q 003302 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPK-GTFVT 157 (832)
Q Consensus 113 DlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpG-G~fV~ 157 (832)
|+|+... ++ ...+..+..+|++| |++|+
T Consensus 264 D~vid~~----g~-------------~~~~~~~~~~l~~~~G~iv~ 292 (374)
T 1cdo_A 264 DFSLECV----GN-------------VGVMRNALESCLKGWGVSVL 292 (374)
T ss_dssp SEEEECS----CC-------------HHHHHHHHHTBCTTTCEEEE
T ss_pred CEEEECC----CC-------------HHHHHHHHHHhhcCCcEEEE
Confidence 9999642 11 12345678999999 99987
No 382
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=85.03 E-value=0.78 Score=51.11 Aligned_cols=38 Identities=13% Similarity=-0.011 Sum_probs=32.7
Q ss_pred CCCCCEEEEEcCCcCHHHHHHH-HhCCCCCEEEEEeCCC
Q 003302 40 LRSSHAVLDLCAAPGGWMQVAV-QRVPVGSLVLGLDLVP 77 (832)
Q Consensus 40 l~~g~~VLDLGcGPGg~sq~La-~~~p~~~~ViGVDLsp 77 (832)
+.++.+|||+||+.|.++..++ ...+..++|++++.+|
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p 262 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDR 262 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCH
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCH
Confidence 3788999999999999999888 5665557999999987
No 383
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=84.72 E-value=1.2 Score=47.53 Aligned_cols=93 Identities=15% Similarity=0.130 Sum_probs=53.9
Q ss_pred CCCCCEEEEEcCC--cCHHHHHHHHhCCCCCEEEEEeCCCCC----CCCCceEEEccCCC-hhHHHHHHHHHhhccCCcc
Q 003302 40 LRSSHAVLDLCAA--PGGWMQVAVQRVPVGSLVLGLDLVPIA----PIRGAVSLEQDITK-PECRARVKKVMEEHGVRAF 112 (832)
Q Consensus 40 l~~g~~VLDLGcG--PGg~sq~La~~~p~~~~ViGVDLsp~~----~i~~V~~i~gDIt~-~~~~~~l~~~L~~~~~~~F 112 (832)
+++|.+||-.||+ -|..+..++... ++.|++++.++-. ..-++. ...|.++ ......+..... +.+
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~~~g~~-~~~d~~~~~~~~~~~~~~~~----~~~ 215 (333)
T 1v3u_A 143 VKGGETVLVSAAAGAVGSVVGQIAKLK--GCKVVGAAGSDEKIAYLKQIGFD-AAFNYKTVNSLEEALKKASP----DGY 215 (333)
T ss_dssp CCSSCEEEEESTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTCS-EEEETTSCSCHHHHHHHHCT----TCE
T ss_pred CCCCCEEEEecCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhcCCc-EEEecCCHHHHHHHHHHHhC----CCC
Confidence 5788999999983 333333344443 4689999987421 001222 1235554 333333333221 467
Q ss_pred cEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 113 DlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
|+|+.+.. + ..+..+..+|++||++++
T Consensus 216 d~vi~~~g----~--------------~~~~~~~~~l~~~G~~v~ 242 (333)
T 1v3u_A 216 DCYFDNVG----G--------------EFLNTVLSQMKDFGKIAI 242 (333)
T ss_dssp EEEEESSC----H--------------HHHHHHHTTEEEEEEEEE
T ss_pred eEEEECCC----h--------------HHHHHHHHHHhcCCEEEE
Confidence 99998642 1 123467899999999987
No 384
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=84.68 E-value=6.4 Score=40.81 Aligned_cols=78 Identities=17% Similarity=0.099 Sum_probs=47.6
Q ss_pred cCCCCCCCEEEEEcCCcCHHHHHHHHhCC-CCCEEEEEeCCCCCCCCCceEEEccCCChhHHHHHHHHHhhccCCcccEE
Q 003302 37 FSFLRSSHAVLDLCAAPGGWMQVAVQRVP-VGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV 115 (832)
Q Consensus 37 f~fl~~g~~VLDLGcGPGg~sq~La~~~p-~~~~ViGVDLsp~~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlV 115 (832)
|++..+.++||=.| |+|+++.+++..+- .+..|++++..+.....++.++.+|+++.... ...+.. +.+|+|
T Consensus 6 ~~~~~~~~~vlVTG-atG~iG~~l~~~L~~~G~~V~~~~r~~~~~~l~~~~~~~Dl~d~~~~---~~~~~~---~~~d~v 78 (321)
T 2pk3_A 6 HHHHHGSMRALITG-VAGFVGKYLANHLTEQNVEVFGTSRNNEAKLPNVEMISLDIMDSQRV---KKVISD---IKPDYI 78 (321)
T ss_dssp -------CEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCTTCCCTTEEEEECCTTCHHHH---HHHHHH---HCCSEE
T ss_pred cccccCcceEEEEC-CCChHHHHHHHHHHHCCCEEEEEecCCccccceeeEEECCCCCHHHH---HHHHHh---cCCCEE
Confidence 45566777888555 56888877765542 35689999887532111788899999986543 333333 235999
Q ss_pred EeCCCC
Q 003302 116 LHDGSP 121 (832)
Q Consensus 116 lsDgap 121 (832)
+|.+++
T Consensus 79 ih~A~~ 84 (321)
T 2pk3_A 79 FHLAAK 84 (321)
T ss_dssp EECCSC
T ss_pred EEcCcc
Confidence 998764
No 385
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=84.67 E-value=2.9 Score=44.41 Aligned_cols=79 Identities=13% Similarity=0.091 Sum_probs=51.5
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC------------CCCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA------------PIRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~------------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
.+.+||=.||+ ||++..++..+ ..+..|++++.++-. .-..+.++.+|+++......+...+...
T Consensus 7 ~~k~vlVTGas-~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~- 84 (319)
T 3ioy_A 7 AGRTAFVTGGA-NGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR- 84 (319)
T ss_dssp TTCEEEEETTT-STHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred CCCEEEEcCCc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh-
Confidence 35688878876 55555554433 236789999887521 0126888999999987655554444322
Q ss_pred CCcccEEEeCCCCC
Q 003302 109 VRAFDLVLHDGSPN 122 (832)
Q Consensus 109 ~~~FDlVlsDgapn 122 (832)
.+.+|+|+++....
T Consensus 85 ~g~id~lv~nAg~~ 98 (319)
T 3ioy_A 85 FGPVSILCNNAGVN 98 (319)
T ss_dssp TCCEEEEEECCCCC
T ss_pred CCCCCEEEECCCcC
Confidence 26789999998654
No 386
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=84.61 E-value=4.9 Score=42.02 Aligned_cols=114 Identities=16% Similarity=0.043 Sum_probs=66.1
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC------------CCCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA------------PIRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~------------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
.+.+||=.|++ ||++..++..+ ..+..|+.++..... .-.++.++++|+++......+...+...
T Consensus 48 ~~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~- 125 (294)
T 3r3s_A 48 KDRKALVTGGD-SGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREA- 125 (294)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHH-
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH-
Confidence 36788888865 56665555443 235688888876210 1235788899999976554444433221
Q ss_pred CCcccEEEeCCCCCC-CC-Cc--hhHHhHH---h--HHHHHHHHHHHhhcccCcEEEE
Q 003302 109 VRAFDLVLHDGSPNV-GG-AW--AQEAMSQ---N--ALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 109 ~~~FDlVlsDgapnv-~g-~w--~~D~~~q---~--~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
.+.+|+|+++..... .+ .+ ..+.+.. . .-...+++.+...|+.+|.+|+
T Consensus 126 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~ 183 (294)
T 3r3s_A 126 LGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIIT 183 (294)
T ss_dssp HTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEE
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEE
Confidence 256799999986432 11 11 1111111 1 1123445666777888999886
No 387
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=84.60 E-value=4 Score=42.88 Aligned_cols=79 Identities=14% Similarity=0.050 Sum_probs=51.1
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC----------CCCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA----------PIRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
.+.+||=.||+ ||++..++..+ ..+..|++++.++-. .-.++.++++|+++......+...+... .+
T Consensus 30 ~gk~vlVTGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g 107 (301)
T 3tjr_A 30 DGRAAVVTGGA-SGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRL-LG 107 (301)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh-CC
Confidence 46788878876 55665554433 235689999887421 1236888999999987655444433221 25
Q ss_pred cccEEEeCCCCC
Q 003302 111 AFDLVLHDGSPN 122 (832)
Q Consensus 111 ~FDlVlsDgapn 122 (832)
.+|+|+++....
T Consensus 108 ~id~lvnnAg~~ 119 (301)
T 3tjr_A 108 GVDVVFSNAGIV 119 (301)
T ss_dssp SCSEEEECCCCC
T ss_pred CCCEEEECCCcC
Confidence 679999998644
No 388
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=84.41 E-value=5 Score=41.55 Aligned_cols=79 Identities=15% Similarity=0.109 Sum_probs=52.1
Q ss_pred CCCEEEEEcCCc-CHHHHHHHHhC-CCCCEEEEEeCCCCC---------CCCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 42 SSHAVLDLCAAP-GGWMQVAVQRV-PVGSLVLGLDLVPIA---------PIRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 42 ~g~~VLDLGcGP-Gg~sq~La~~~-p~~~~ViGVDLsp~~---------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
.+.+||=.|++. ||++..++..+ ..+..|+.++.++-. ..+++.++.+|+++......+...+... .+
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~g 98 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEEN-WG 98 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH-TS
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence 367888888863 77776665543 235689999876520 1235788999999976555444433321 26
Q ss_pred cccEEEeCCCC
Q 003302 111 AFDLVLHDGSP 121 (832)
Q Consensus 111 ~FDlVlsDgap 121 (832)
.+|+|+++...
T Consensus 99 ~iD~lv~~Ag~ 109 (285)
T 2p91_A 99 SLDIIVHSIAY 109 (285)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 77999999864
No 389
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=84.36 E-value=1 Score=45.63 Aligned_cols=77 Identities=21% Similarity=0.242 Sum_probs=47.5
Q ss_pred CCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCC-----CCCCCceEEEccCCChhHHHHHHHHHhhccCCcccEEEe
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPI-----APIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~-----~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVls 117 (832)
+.+||=.|++ ||++..++..+..++.|++++.++- ..+.++.++.+|+++......+...+. ..+.+|+|++
T Consensus 5 ~k~vlITGas-~gIG~~~a~~l~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~--~~~~id~lv~ 81 (245)
T 3e9n_A 5 KKIAVVTGAT-GGMGIEIVKDLSRDHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLK--NLDHVDTLVH 81 (245)
T ss_dssp -CEEEEESTT-SHHHHHHHHHHTTTSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGT--TCSCCSEEEE
T ss_pred CCEEEEEcCC-CHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHH--hcCCCCEEEE
Confidence 5677767754 6677777766655788999987742 235678889999887532111111121 1257899999
Q ss_pred CCCCC
Q 003302 118 DGSPN 122 (832)
Q Consensus 118 Dgapn 122 (832)
+....
T Consensus 82 ~Ag~~ 86 (245)
T 3e9n_A 82 AAAVA 86 (245)
T ss_dssp CC---
T ss_pred CCCcC
Confidence 98543
No 390
>1ej6_A Lambda2; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_U
Probab=84.34 E-value=2.5 Score=51.99 Aligned_cols=89 Identities=20% Similarity=0.276 Sum_probs=64.7
Q ss_pred CcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEEE-cCCCCHHHHHHHHH---HcccceEEecCC
Q 003302 110 RAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKV-FRSQDYSSVLYCLK---QLFEKVEVDKPA 185 (832)
Q Consensus 110 ~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~KV-Frs~d~~~ll~~L~---~~F~~V~~~KP~ 185 (832)
|.|-+|.+|.--.+.|.-..++.. ......|..|+.+..+||.+|+|| |... .-+-.+++ .+|..++++||.
T Consensus 569 Gtf~fVYSDvDQV~dgg~Dl~Aas--r~~~~~l~~~l~~tt~GG~~VvKiNFPT~--~~W~~lf~~~~~~~~s~~lvKP~ 644 (1289)
T 1ej6_A 569 GDYQFVYSDVDQVVDGHDDLSISS--GLVESLLSSCMHATAPGGSFVVKINFPTR--PVWHYIEQKILPNITSYMLIKPF 644 (1289)
T ss_dssp CCEEEEEECCCCCCSSSTTHHHHH--HHHHHHHHHHHHHEEEEEEEEEEESSCCH--HHHHHHHHHTGGGEEEEEEEEEE
T ss_pred cceEEEEechhhhhcCCCcchhhH--HHHHHHHHHHHHhhccCceEEEEEcCCCh--HHHHHHHHhhccccceeeeecce
Confidence 889999999754444544455443 456678889999999999999998 4432 22233444 447889999998
Q ss_pred CCCCCCcceeEEEeeccCC
Q 003302 186 ASRSASAEIYLLGIKYKAP 204 (832)
Q Consensus 186 sSR~~SaEiyvVc~gfk~p 204 (832)
-. .|.|+|+||-|+...
T Consensus 645 Iv--NnvEvflv~~~r~~~ 661 (1289)
T 1ej6_A 645 VT--NNVELFFVAFGVHQH 661 (1289)
T ss_dssp SS--SSCCEEEEEEEESCC
T ss_pred ee--cceEEEEEEEeeecC
Confidence 75 467999999999843
No 391
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=84.19 E-value=5.1 Score=41.39 Aligned_cols=114 Identities=13% Similarity=0.027 Sum_probs=64.9
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
.+.+||=.|+ +||++..++..+ ..+..|++++.++.. .-.++.++.+|+++......+...+... +
T Consensus 28 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~ 105 (283)
T 1g0o_A 28 EGKVALVTGA-GRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI-F 105 (283)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence 3567876665 466666665543 235689998876521 0135788999999976554443333221 2
Q ss_pred CcccEEEeCCCCCCCC-Cc--hhHHhHH-----hHHHHHHHHHHHhhcccCcEEEE
Q 003302 110 RAFDLVLHDGSPNVGG-AW--AQEAMSQ-----NALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 110 ~~FDlVlsDgapnv~g-~w--~~D~~~q-----~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
+.+|+|+++......+ .+ ..+.+.. ..-...+++.+...|+.+|.+|+
T Consensus 106 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~ 161 (283)
T 1g0o_A 106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLIL 161 (283)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEE
Confidence 5679999998643222 11 1111111 01123345566666777888886
No 392
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=84.15 E-value=4 Score=44.21 Aligned_cols=95 Identities=12% Similarity=0.111 Sum_probs=54.4
Q ss_pred CCCCCEEEEEcCCc-CHHHHHHHHhCCCCCEEEEEeCCCCC----CCCCceEEEccCCC--hhHHHHHHHHHhhccCCcc
Q 003302 40 LRSSHAVLDLCAAP-GGWMQVAVQRVPVGSLVLGLDLVPIA----PIRGAVSLEQDITK--PECRARVKKVMEEHGVRAF 112 (832)
Q Consensus 40 l~~g~~VLDLGcGP-Gg~sq~La~~~p~~~~ViGVDLsp~~----~i~~V~~i~gDIt~--~~~~~~l~~~L~~~~~~~F 112 (832)
+++|.+||=+|||+ |.++..+++.++ ...|++++.++-. .--++..+ .|..+ ....+.+..... +.|
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~v~~~~~----~g~ 266 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIAG-ASRIIAIDINGEKFPKAKALGATDC-LNPRELDKPVQDVITELTA----GGV 266 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHHHTTCSEE-ECGGGCSSCHHHHHHHHHT----SCB
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHHhCCcEE-EccccccchHHHHHHHHhC----CCc
Confidence 56899999999765 444455566653 2389999987632 11133221 12221 122333333222 357
Q ss_pred cEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccC-cEEEE
Q 003302 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPK-GTFVT 157 (832)
Q Consensus 113 DlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpG-G~fV~ 157 (832)
|+|+-.. ++ ...+..+..+|++| |++|+
T Consensus 267 Dvvid~~----G~-------------~~~~~~~~~~l~~~~G~iv~ 295 (376)
T 1e3i_A 267 DYSLDCA----GT-------------AQTLKAAVDCTVLGWGSCTV 295 (376)
T ss_dssp SEEEESS----CC-------------HHHHHHHHHTBCTTTCEEEE
T ss_pred cEEEECC----CC-------------HHHHHHHHHHhhcCCCEEEE
Confidence 9999642 11 12345678999999 99987
No 393
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=84.11 E-value=6.6 Score=40.68 Aligned_cols=79 Identities=16% Similarity=0.095 Sum_probs=51.1
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC----------CCCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA----------PIRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
.+.+||=.|++ ||++..++..+ ..+..|+.++.++-. .-.++.++++|+++......+...+... .+
T Consensus 31 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~-~g 108 (276)
T 3r1i_A 31 SGKRALITGAS-TGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGE-LG 108 (276)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence 46788877766 55665554433 236689999887521 1136888999999987555444433221 25
Q ss_pred cccEEEeCCCCC
Q 003302 111 AFDLVLHDGSPN 122 (832)
Q Consensus 111 ~FDlVlsDgapn 122 (832)
.+|+|+++....
T Consensus 109 ~iD~lvnnAg~~ 120 (276)
T 3r1i_A 109 GIDIAVCNAGIV 120 (276)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 779999998644
No 394
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=84.04 E-value=8.8 Score=39.71 Aligned_cols=78 Identities=14% Similarity=0.145 Sum_probs=51.9
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCCC----------CCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIAP----------IRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~~----------i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
.+.+||=.|++ ||++..++..+ ..+..|+.++.++-.. -..+.++++|+++......+...+... +
T Consensus 32 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~--g 108 (275)
T 4imr_A 32 RGRTALVTGSS-RGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI--A 108 (275)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH--S
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh--C
Confidence 46778866755 56665555443 2366899999876321 245888999999987665555544332 5
Q ss_pred cccEEEeCCCCC
Q 003302 111 AFDLVLHDGSPN 122 (832)
Q Consensus 111 ~FDlVlsDgapn 122 (832)
.+|+|+++....
T Consensus 109 ~iD~lvnnAg~~ 120 (275)
T 4imr_A 109 PVDILVINASAQ 120 (275)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 679999998643
No 395
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=83.97 E-value=0.74 Score=49.58 Aligned_cols=96 Identities=13% Similarity=0.204 Sum_probs=55.7
Q ss_pred CCCCCEEEEEcCCc-CHHHHHHHHhCCCCCEEEEEeCCCCC----CCCCceEEEccCCChhHHHHHHHHHhhccCCcccE
Q 003302 40 LRSSHAVLDLCAAP-GGWMQVAVQRVPVGSLVLGLDLVPIA----PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114 (832)
Q Consensus 40 l~~g~~VLDLGcGP-Gg~sq~La~~~p~~~~ViGVDLsp~~----~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDl 114 (832)
+++|.+||=+|||+ |.++..+++.++ ...|+++|.++-. .--++..+ .|..+....+.+.....+ ..||+
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~v~~~t~g---~g~D~ 238 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLG-AGRIFAVGSRKHCCDIALEYGATDI-INYKNGDIVEQILKATDG---KGVDK 238 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTT-CSSEEEECCCHHHHHHHHHHTCCEE-ECGGGSCHHHHHHHHTTT---CCEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEECCCHHHHHHHHHhCCceE-EcCCCcCHHHHHHHHcCC---CCCCE
Confidence 57889999999866 445555666554 2379999987521 00122211 122233333444444332 35799
Q ss_pred EEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 115 VlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
|+... ++. .++..+..+|+|||++++
T Consensus 239 v~d~~----g~~-------------~~~~~~~~~l~~~G~~v~ 264 (352)
T 3fpc_A 239 VVIAG----GDV-------------HTFAQAVKMIKPGSDIGN 264 (352)
T ss_dssp EEECS----SCT-------------THHHHHHHHEEEEEEEEE
T ss_pred EEECC----CCh-------------HHHHHHHHHHhcCCEEEE
Confidence 99632 110 134467889999999987
No 396
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=83.63 E-value=4.7 Score=41.53 Aligned_cols=78 Identities=17% Similarity=0.123 Sum_probs=50.3
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC------CCCCceEEEccCCChhHHHHHHHHHhhccCCcccE
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA------PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDl 114 (832)
.+.+||=.|++ |+++..++..+ ..+..|++++.++-. .++++.++++|+++......+...+... .+.+|+
T Consensus 8 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g~iD~ 85 (270)
T 1yde_A 8 AGKVVVVTGGG-RGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRR-FGRLDC 85 (270)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHH-HSCCCE
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHH-cCCCCE
Confidence 35778877765 56665555443 235689999887421 2346888999999976554444333221 256799
Q ss_pred EEeCCCC
Q 003302 115 VLHDGSP 121 (832)
Q Consensus 115 VlsDgap 121 (832)
|+++...
T Consensus 86 lv~nAg~ 92 (270)
T 1yde_A 86 VVNNAGH 92 (270)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9999754
No 397
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=83.51 E-value=6.6 Score=39.97 Aligned_cols=78 Identities=13% Similarity=0.075 Sum_probs=49.9
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC---------CCCCceEEEccCCChhHHHHHHHHHhhccCCc
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA---------PIRGAVSLEQDITKPECRARVKKVMEEHGVRA 111 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~---------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~ 111 (832)
.+.+||=.|+ +|+++..++..+ ..+..|++++.++-. ...++.++.+|+++......+...+... .+.
T Consensus 15 ~~k~vlITGa-sggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 92 (278)
T 2bgk_A 15 QDKVAIITGG-AGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAK-HGK 92 (278)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHH-HSC
T ss_pred cCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHH-cCC
Confidence 3578887776 567776665543 235689999876411 1126889999999977554444333221 156
Q ss_pred ccEEEeCCCC
Q 003302 112 FDLVLHDGSP 121 (832)
Q Consensus 112 FDlVlsDgap 121 (832)
+|+|+++...
T Consensus 93 id~li~~Ag~ 102 (278)
T 2bgk_A 93 LDIMFGNVGV 102 (278)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCcc
Confidence 7999998754
No 398
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=83.47 E-value=11 Score=39.88 Aligned_cols=79 Identities=14% Similarity=0.130 Sum_probs=49.7
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC----------------------CCCCceEEEccCCChhHHH
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA----------------------PIRGAVSLEQDITKPECRA 98 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~----------------------~i~~V~~i~gDIt~~~~~~ 98 (832)
.+.+||=.|++ ||++..++..+ ..+..|+.+|.+.-. .-..+.++++|+++.....
T Consensus 45 ~gk~~lVTGas-~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~ 123 (317)
T 3oec_A 45 QGKVAFITGAA-RGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ 123 (317)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 36778867765 55555554433 236789999876211 0135788999999987555
Q ss_pred HHHHHHhhccCCcccEEEeCCCCC
Q 003302 99 RVKKVMEEHGVRAFDLVLHDGSPN 122 (832)
Q Consensus 99 ~l~~~L~~~~~~~FDlVlsDgapn 122 (832)
.+...+... ++.+|+|+++....
T Consensus 124 ~~~~~~~~~-~g~iD~lVnnAg~~ 146 (317)
T 3oec_A 124 AVVDEALAE-FGHIDILVSNVGIS 146 (317)
T ss_dssp HHHHHHHHH-HSCCCEEEECCCCC
T ss_pred HHHHHHHHH-cCCCCEEEECCCCC
Confidence 444433221 26779999998643
No 399
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=83.47 E-value=9.4 Score=38.47 Aligned_cols=78 Identities=14% Similarity=0.078 Sum_probs=50.8
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCCC-------CCCceEEEccCCChhHHHHHHHHHhhccCCccc
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIAP-------IRGAVSLEQDITKPECRARVKKVMEEHGVRAFD 113 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~~-------i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FD 113 (832)
.+.+||=.|++ |+++..++..+ ..+..|++++.++-.. -.++.++.+|+++......+...+... .+.+|
T Consensus 11 ~~k~vlVTGas-ggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~g~id 88 (265)
T 2o23_A 11 KGLVAVITGGA-SGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGK-FGRVD 88 (265)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHH-HSCCC
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHH-CCCCC
Confidence 35778878775 66666665543 2356899998875321 135888999999976554444333221 25679
Q ss_pred EEEeCCCC
Q 003302 114 LVLHDGSP 121 (832)
Q Consensus 114 lVlsDgap 121 (832)
+|+++...
T Consensus 89 ~li~~Ag~ 96 (265)
T 2o23_A 89 VAVNCAGI 96 (265)
T ss_dssp EEEECCCC
T ss_pred EEEECCcc
Confidence 99999754
No 400
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=83.30 E-value=4.2 Score=43.97 Aligned_cols=95 Identities=11% Similarity=0.089 Sum_probs=54.1
Q ss_pred CCCCCEEEEEcCCc-CHHHHHHHHhCCCCCEEEEEeCCCCC----CCCCceEEEccCCC--hhHHHHHHHHHhhccCCcc
Q 003302 40 LRSSHAVLDLCAAP-GGWMQVAVQRVPVGSLVLGLDLVPIA----PIRGAVSLEQDITK--PECRARVKKVMEEHGVRAF 112 (832)
Q Consensus 40 l~~g~~VLDLGcGP-Gg~sq~La~~~p~~~~ViGVDLsp~~----~i~~V~~i~gDIt~--~~~~~~l~~~L~~~~~~~F 112 (832)
+++|.+||-+|||+ |.++..+++.++ ...|++++.++-. .--++..+ .|..+ ....+.+..... +.|
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~~~~~~----~g~ 262 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKAAG-AARIIGVDINKDKFAKAKEVGATEC-VNPQDYKKPIQEVLTEMSN----GGV 262 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHHHTTCSEE-ECGGGCSSCHHHHHHHHTT----SCB
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHHhCCceE-ecccccchhHHHHHHHHhC----CCC
Confidence 57889999999765 444455556653 2389999987632 11133221 12221 122233333221 357
Q ss_pred cEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccC-cEEEE
Q 003302 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPK-GTFVT 157 (832)
Q Consensus 113 DlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpG-G~fV~ 157 (832)
|+|+.... + ...+..+..+|++| |++|+
T Consensus 263 D~vid~~g----~-------------~~~~~~~~~~l~~~~G~iv~ 291 (374)
T 2jhf_A 263 DFSFEVIG----R-------------LDTMVTALSCCQEAYGVSVI 291 (374)
T ss_dssp SEEEECSC----C-------------HHHHHHHHHHBCTTTCEEEE
T ss_pred cEEEECCC----C-------------HHHHHHHHHHhhcCCcEEEE
Confidence 99986421 1 12345678899999 99987
No 401
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=83.28 E-value=2.7 Score=49.39 Aligned_cols=37 Identities=14% Similarity=0.109 Sum_probs=25.5
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-------C----CCCEEEEEeCCCC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-------P----VGSLVLGLDLVPI 78 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-------p----~~~~ViGVDLsp~ 78 (832)
+.-+|||+|-|+|.-...+.+.. | ..-++++++.-|+
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~ 113 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPL 113 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCC
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCC
Confidence 34589999999999665554432 1 1236999999664
No 402
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=83.28 E-value=6.7 Score=40.48 Aligned_cols=80 Identities=9% Similarity=-0.028 Sum_probs=51.8
Q ss_pred CCCEEEEEcCCc-CHHHHHHHHhC-CCCCEEEEEeCCCCC--------CCCCceEEEccCCChhHHHHHHHHHhhccCCc
Q 003302 42 SSHAVLDLCAAP-GGWMQVAVQRV-PVGSLVLGLDLVPIA--------PIRGAVSLEQDITKPECRARVKKVMEEHGVRA 111 (832)
Q Consensus 42 ~g~~VLDLGcGP-Gg~sq~La~~~-p~~~~ViGVDLsp~~--------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~ 111 (832)
.+.+||=.|++. +|++..++..+ ..+..|+.++.+... ..+++.++++|+++......+...+... .+.
T Consensus 25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~g~ 103 (280)
T 3nrc_A 25 AGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKV-WDG 103 (280)
T ss_dssp TTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHH-CSS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHH-cCC
Confidence 357888888652 34554444332 235689999887621 2346889999999987655555444332 267
Q ss_pred ccEEEeCCCCC
Q 003302 112 FDLVLHDGSPN 122 (832)
Q Consensus 112 FDlVlsDgapn 122 (832)
+|+|+++....
T Consensus 104 id~li~nAg~~ 114 (280)
T 3nrc_A 104 LDAIVHSIAFA 114 (280)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCccC
Confidence 89999998643
No 403
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=83.28 E-value=11 Score=40.65 Aligned_cols=79 Identities=10% Similarity=0.045 Sum_probs=50.5
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC--C---------------CCCceEEEccCCChhHHHHHHHH
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA--P---------------IRGAVSLEQDITKPECRARVKKV 103 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~--~---------------i~~V~~i~gDIt~~~~~~~l~~~ 103 (832)
.+.+||=.|++. |++..++..+ ..+..|+.++.+... . -..+.++++|+++......+...
T Consensus 44 ~gk~vlVTGas~-GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~ 122 (346)
T 3kvo_A 44 AGCTVFITGASR-GIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEK 122 (346)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCh-HHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence 467888777764 5555444433 346789999877532 1 12477889999998765544444
Q ss_pred HhhccCCcccEEEeCCCCC
Q 003302 104 MEEHGVRAFDLVLHDGSPN 122 (832)
Q Consensus 104 L~~~~~~~FDlVlsDgapn 122 (832)
+... ++.+|+|+++....
T Consensus 123 ~~~~-~g~iDilVnnAG~~ 140 (346)
T 3kvo_A 123 AIKK-FGGIDILVNNASAI 140 (346)
T ss_dssp HHHH-HSCCCEEEECCCCC
T ss_pred HHHH-cCCCCEEEECCCCC
Confidence 3322 25679999998643
No 404
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=83.26 E-value=10 Score=39.74 Aligned_cols=74 Identities=18% Similarity=0.208 Sum_probs=49.3
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCC-CCCEEEEEeCCCC------CCCCCceEEEccCCChhHHHHHHHHHhhccCCcccE
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVP-VGSLVLGLDLVPI------APIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p-~~~~ViGVDLsp~------~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDl 114 (832)
.+++||=.| |+|+++.+++..+- .+..|++++..+. ..++++.++.+|+++...... .+... .+|+
T Consensus 19 ~~~~vlVTG-asG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~---~~~~~---~~D~ 91 (330)
T 2pzm_A 19 SHMRILITG-GAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLER---AFDSF---KPTH 91 (330)
T ss_dssp TCCEEEEET-TTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHH---HHHHH---CCSE
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHH---HHhhc---CCCE
Confidence 467888777 45777777765442 3568999988542 223678899999999754332 23211 4599
Q ss_pred EEeCCCCC
Q 003302 115 VLHDGSPN 122 (832)
Q Consensus 115 VlsDgapn 122 (832)
|+|.+++.
T Consensus 92 vih~A~~~ 99 (330)
T 2pzm_A 92 VVHSAAAY 99 (330)
T ss_dssp EEECCCCC
T ss_pred EEECCccC
Confidence 99998654
No 405
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=83.21 E-value=0.93 Score=49.39 Aligned_cols=99 Identities=16% Similarity=0.108 Sum_probs=55.6
Q ss_pred CCCCCEEEEEcCCc-CHHHHHHHHhCCCCCEEEEEeCCCCC----CCCCceEEEccCCChhHHHHHHHHHhhccCCcccE
Q 003302 40 LRSSHAVLDLCAAP-GGWMQVAVQRVPVGSLVLGLDLVPIA----PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114 (832)
Q Consensus 40 l~~g~~VLDLGcGP-Gg~sq~La~~~p~~~~ViGVDLsp~~----~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDl 114 (832)
+++|.+||=+|||+ |.++..+++.++ ...|++++.++-. .--++..+ .|..+......+..... ...+.||+
T Consensus 180 ~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~i~~~~~-~~~gg~Dv 256 (370)
T 4ej6_A 180 IKAGSTVAILGGGVIGLLTVQLARLAG-ATTVILSTRQATKRRLAEEVGATAT-VDPSAGDVVEAIAGPVG-LVPGGVDV 256 (370)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHTCSEE-ECTTSSCHHHHHHSTTS-SSTTCEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHcCCCEE-ECCCCcCHHHHHHhhhh-ccCCCCCE
Confidence 57899999999865 445555666654 2389999987621 00122211 13333332233322100 11146799
Q ss_pred EEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEE
Q 003302 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTK 158 (832)
Q Consensus 115 VlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~K 158 (832)
|+-.. ++ ...+..+..+|++||++|+.
T Consensus 257 vid~~----G~-------------~~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 257 VIECA----GV-------------AETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp EEECS----CC-------------HHHHHHHHHHEEEEEEEEEC
T ss_pred EEECC----CC-------------HHHHHHHHHHhccCCEEEEE
Confidence 99642 11 12345678999999999973
No 406
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=83.14 E-value=3.6 Score=42.10 Aligned_cols=78 Identities=12% Similarity=-0.022 Sum_probs=51.3
Q ss_pred CCEEEEEcCCc-CHHHHHHHHhC-CCCCEEEEEeCCCCC---------CCCCceEEEccCCChhHHHHHHHHHhhccCCc
Q 003302 43 SHAVLDLCAAP-GGWMQVAVQRV-PVGSLVLGLDLVPIA---------PIRGAVSLEQDITKPECRARVKKVMEEHGVRA 111 (832)
Q Consensus 43 g~~VLDLGcGP-Gg~sq~La~~~-p~~~~ViGVDLsp~~---------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~ 111 (832)
+.+||=.|++. |+++..++..+ ..+..|+.++.++-. ..+++.++++|+++......+...+.. ..+.
T Consensus 9 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~~g~ 87 (265)
T 1qsg_A 9 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGK-VWPK 87 (265)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHT-TCSS
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHH-HcCC
Confidence 56788888763 77776665543 235689999887610 113457889999998755544443332 2367
Q ss_pred ccEEEeCCCC
Q 003302 112 FDLVLHDGSP 121 (832)
Q Consensus 112 FDlVlsDgap 121 (832)
+|+|+++...
T Consensus 88 iD~lv~~Ag~ 97 (265)
T 1qsg_A 88 FDGFVHSIGF 97 (265)
T ss_dssp EEEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999999864
No 407
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=83.04 E-value=1.3 Score=47.23 Aligned_cols=93 Identities=17% Similarity=0.143 Sum_probs=55.8
Q ss_pred CCCCCEEEEEcCC--cCHHHHHHHHhCCCCCEEEEEeCCCCC-----CCCCceEEEccCCChhHHHHHHHHHhhccCCcc
Q 003302 40 LRSSHAVLDLCAA--PGGWMQVAVQRVPVGSLVLGLDLVPIA-----PIRGAVSLEQDITKPECRARVKKVMEEHGVRAF 112 (832)
Q Consensus 40 l~~g~~VLDLGcG--PGg~sq~La~~~p~~~~ViGVDLsp~~-----~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~F 112 (832)
+++|.+||-.||+ -|..+..++... ++.|++++.++-. .--++.. ..|..+......+.... . +.|
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~-~---~~~ 219 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLK--GCRVVGIAGGAEKCRFLVEELGFDG-AIDYKNEDLAAGLKREC-P---KGI 219 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTCCSE-EEETTTSCHHHHHHHHC-T---TCE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHcCCCE-EEECCCHHHHHHHHHhc-C---CCc
Confidence 5789999988883 344444455554 4599999987521 1112221 12444444444444433 1 467
Q ss_pred cEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 113 DlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
|+|+.... + ..+..+..+|++||++|+
T Consensus 220 d~vi~~~g----~--------------~~~~~~~~~l~~~G~iv~ 246 (336)
T 4b7c_A 220 DVFFDNVG----G--------------EILDTVLTRIAFKARIVL 246 (336)
T ss_dssp EEEEESSC----H--------------HHHHHHHTTEEEEEEEEE
T ss_pred eEEEECCC----c--------------chHHHHHHHHhhCCEEEE
Confidence 99997532 1 134567899999999987
No 408
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=83.01 E-value=7.1 Score=40.22 Aligned_cols=78 Identities=14% Similarity=0.068 Sum_probs=50.3
Q ss_pred CCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCC----CCCCCceEEEccCCChhHHHHHHHHHhhccCCcccEEEe
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPI----APIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLH 117 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~----~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVls 117 (832)
+.+||=.|++ ||++..++..+ ..+..|+.++.+.- ....++.++++|+++......+...+... .+.+|+|++
T Consensus 16 ~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g~iD~lvn 93 (266)
T 3p19_A 16 KKLVVITGAS-SGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKI-YGPADAIVN 93 (266)
T ss_dssp CCEEEEESTT-SHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHH-HCSEEEEEE
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHH-CCCCCEEEE
Confidence 5678877765 56665555443 23568999988741 12346888999999976555444433221 257899999
Q ss_pred CCCCC
Q 003302 118 DGSPN 122 (832)
Q Consensus 118 Dgapn 122 (832)
+....
T Consensus 94 nAg~~ 98 (266)
T 3p19_A 94 NAGMM 98 (266)
T ss_dssp CCCCC
T ss_pred CCCcC
Confidence 98644
No 409
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=83.01 E-value=5.6 Score=40.52 Aligned_cols=79 Identities=15% Similarity=0.130 Sum_probs=50.8
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC------C-CCCceEEEccCCChhHHHHHHHHHhhccCCccc
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA------P-IRGAVSLEQDITKPECRARVKKVMEEHGVRAFD 113 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~------~-i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FD 113 (832)
.+.+||=.|++ ||++..++..+ ..+..|+.++.++-. . -..+.++++|+++......+...+... .+.+|
T Consensus 7 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~g~id 84 (259)
T 4e6p_A 7 EGKSALITGSA-RGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEH-AGGLD 84 (259)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHH-SSSCC
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHH-cCCCC
Confidence 35778877755 66666555443 235689999876421 1 135788999999987554444433222 36789
Q ss_pred EEEeCCCCC
Q 003302 114 LVLHDGSPN 122 (832)
Q Consensus 114 lVlsDgapn 122 (832)
+|+++....
T Consensus 85 ~lv~~Ag~~ 93 (259)
T 4e6p_A 85 ILVNNAALF 93 (259)
T ss_dssp EEEECCCCC
T ss_pred EEEECCCcC
Confidence 999998643
No 410
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=82.91 E-value=3.7 Score=44.44 Aligned_cols=95 Identities=14% Similarity=0.041 Sum_probs=53.7
Q ss_pred CCCCCEEEEEcCCc-CHHHHHHHHhCCCCCEEEEEeCCCCC----CCCCceEEEccCCC--hhHHHHHHHHHhhccCCcc
Q 003302 40 LRSSHAVLDLCAAP-GGWMQVAVQRVPVGSLVLGLDLVPIA----PIRGAVSLEQDITK--PECRARVKKVMEEHGVRAF 112 (832)
Q Consensus 40 l~~g~~VLDLGcGP-Gg~sq~La~~~p~~~~ViGVDLsp~~----~i~~V~~i~gDIt~--~~~~~~l~~~L~~~~~~~F 112 (832)
+++|.+||=+|||+ |.++..+++.++ ...|++++.++-. .--++..+ .|..+ ....+.+..... +.|
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~i~~~t~----gg~ 262 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAAG-ASRIIGVGTHKDKFPKAIELGATEC-LNPKDYDKPIYEVICEKTN----GGV 262 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGHHHHHHTTCSEE-ECGGGCSSCHHHHHHHHTT----SCB
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHHHHHHcCCcEE-EecccccchHHHHHHHHhC----CCC
Confidence 57899999999765 334444555543 2389999987632 11133221 12221 122233333222 357
Q ss_pred cEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccC-cEEEE
Q 003302 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPK-GTFVT 157 (832)
Q Consensus 113 DlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpG-G~fV~ 157 (832)
|+|+-.. ++ ...+..+..+|++| |++|+
T Consensus 263 Dvvid~~----g~-------------~~~~~~~~~~l~~~~G~iv~ 291 (373)
T 1p0f_A 263 DYAVECA----GR-------------IETMMNALQSTYCGSGVTVV 291 (373)
T ss_dssp SEEEECS----CC-------------HHHHHHHHHTBCTTTCEEEE
T ss_pred CEEEECC----CC-------------HHHHHHHHHHHhcCCCEEEE
Confidence 9999642 11 12345678999999 99987
No 411
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=82.89 E-value=11 Score=38.83 Aligned_cols=79 Identities=14% Similarity=0.132 Sum_probs=49.2
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCC----------C-------------CCCCceEEEccCCChhHH
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPI----------A-------------PIRGAVSLEQDITKPECR 97 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~----------~-------------~i~~V~~i~gDIt~~~~~ 97 (832)
.+.+||=.|++. |++..++..+ ..+..|+.+|...- . .-..+.++++|+++....
T Consensus 10 ~~k~~lVTGas~-GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 88 (277)
T 3tsc_A 10 EGRVAFITGAAR-GQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRL 88 (277)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred CCCEEEEECCcc-HHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence 367888788665 4554444332 23678999987421 0 113578899999998755
Q ss_pred HHHHHHHhhccCCcccEEEeCCCCC
Q 003302 98 ARVKKVMEEHGVRAFDLVLHDGSPN 122 (832)
Q Consensus 98 ~~l~~~L~~~~~~~FDlVlsDgapn 122 (832)
..+...+... .+.+|+|+++....
T Consensus 89 ~~~~~~~~~~-~g~id~lvnnAg~~ 112 (277)
T 3tsc_A 89 RKVVDDGVAA-LGRLDIIVANAGVA 112 (277)
T ss_dssp HHHHHHHHHH-HSCCCEEEECCCCC
T ss_pred HHHHHHHHHH-cCCCCEEEECCCCC
Confidence 5444433221 25679999998644
No 412
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=82.80 E-value=2.4 Score=45.31 Aligned_cols=93 Identities=13% Similarity=0.053 Sum_probs=55.0
Q ss_pred CCCCCEEEEEcCCc-CHHHHHHHHhCCCCCEEEEEeCCCCC----CCCCceEEEccCCChhHHHHHHHHHhhccCCcccE
Q 003302 40 LRSSHAVLDLCAAP-GGWMQVAVQRVPVGSLVLGLDLVPIA----PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114 (832)
Q Consensus 40 l~~g~~VLDLGcGP-Gg~sq~La~~~p~~~~ViGVDLsp~~----~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDl 114 (832)
+++|.+||-+|||+ |..+..+++.+ +..|++++.++-. .--++..+ .|..+......+.... +.||+
T Consensus 162 ~~~g~~VlV~GaG~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~lGa~~~-~d~~~~~~~~~~~~~~-----~~~d~ 233 (339)
T 1rjw_A 162 AKPGEWVAIYGIGGLGHVAVQYAKAM--GLNVVAVDIGDEKLELAKELGADLV-VNPLKEDAAKFMKEKV-----GGVHA 233 (339)
T ss_dssp CCTTCEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTCSEE-ECTTTSCHHHHHHHHH-----SSEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHCCCCEE-ecCCCccHHHHHHHHh-----CCCCE
Confidence 57899999999965 33444455555 4599999987521 01122221 2444333333333322 35799
Q ss_pred EEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 115 VlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
|+.... + . ..+..+..+|++||+|++
T Consensus 234 vid~~g----~---~----------~~~~~~~~~l~~~G~~v~ 259 (339)
T 1rjw_A 234 AVVTAV----S---K----------PAFQSAYNSIRRGGACVL 259 (339)
T ss_dssp EEESSC----C---H----------HHHHHHHHHEEEEEEEEE
T ss_pred EEECCC----C---H----------HHHHHHHHHhhcCCEEEE
Confidence 997532 1 0 234567889999999987
No 413
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=82.80 E-value=11 Score=37.28 Aligned_cols=78 Identities=13% Similarity=-0.003 Sum_probs=49.5
Q ss_pred CCEEEEEcCCcCHHHHHHHHhCC-CC--CEEEEEeCCCCC-----C--CCCceEEEccCCChhHHHHHHHHHhhccCC--
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRVP-VG--SLVLGLDLVPIA-----P--IRGAVSLEQDITKPECRARVKKVMEEHGVR-- 110 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~p-~~--~~ViGVDLsp~~-----~--i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~-- 110 (832)
+.+||=.|+ +|+++..++..+- .+ ..|++++.++.. . -.++.++.+|+++......+...+... .+
T Consensus 3 ~k~vlItGa-sggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~~ 80 (250)
T 1yo6_A 3 PGSVVVTGA-NRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEI-VGSD 80 (250)
T ss_dssp CSEEEESSC-SSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHH-HGGG
T ss_pred CCEEEEecC-CchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHh-cCCC
Confidence 456776665 5777777666542 34 689999887521 1 236889999999976554444333221 12
Q ss_pred cccEEEeCCCCC
Q 003302 111 AFDLVLHDGSPN 122 (832)
Q Consensus 111 ~FDlVlsDgapn 122 (832)
.+|+|++++...
T Consensus 81 ~id~li~~Ag~~ 92 (250)
T 1yo6_A 81 GLSLLINNAGVL 92 (250)
T ss_dssp CCCEEEECCCCC
T ss_pred CCcEEEECCccc
Confidence 579999997543
No 414
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=82.78 E-value=9.9 Score=39.33 Aligned_cols=74 Identities=18% Similarity=0.170 Sum_probs=50.3
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC----CCCCceEEEccCCChhHHHHHHHHHhhccCCcccEEE
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA----PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~----~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVl 116 (832)
.|+++|=-|++.|. +..++..+ ..++.|+.+|++.-. .-.++.++++|+++....+.+... ++++|+++
T Consensus 10 ~GK~alVTGas~GI-G~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-----~g~iDiLV 83 (242)
T 4b79_A 10 AGQQVLVTGGSSGI-GAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEA-----LPRLDVLV 83 (242)
T ss_dssp TTCEEEEETTTSHH-HHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHH-----CSCCSEEE
T ss_pred CCCEEEEeCCCCHH-HHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHh-----cCCCCEEE
Confidence 58899988887664 44333322 246799999988632 234688899999997655444332 37789999
Q ss_pred eCCCC
Q 003302 117 HDGSP 121 (832)
Q Consensus 117 sDgap 121 (832)
+|...
T Consensus 84 NNAGi 88 (242)
T 4b79_A 84 NNAGI 88 (242)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 99753
No 415
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=82.55 E-value=6.4 Score=40.86 Aligned_cols=79 Identities=15% Similarity=0.105 Sum_probs=49.8
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC------C-CCCceEEEccCCChhHHHHHHHHHhhccCCccc
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA------P-IRGAVSLEQDITKPECRARVKKVMEEHGVRAFD 113 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~------~-i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FD 113 (832)
.+.+||=.|++. |++..++..+ ..+..|+.++.++-. . -..+.++++|+++......+...+... .+.+|
T Consensus 28 ~gk~vlVTGas~-gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g~iD 105 (277)
T 3gvc_A 28 AGKVAIVTGAGA-GIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAA-FGGVD 105 (277)
T ss_dssp TTCEEEETTTTS-THHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHH-HSSCC
T ss_pred CCCEEEEECCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHH-cCCCC
Confidence 367788777664 4554444332 236789999887421 1 135788999999987655444433221 25679
Q ss_pred EEEeCCCCC
Q 003302 114 LVLHDGSPN 122 (832)
Q Consensus 114 lVlsDgapn 122 (832)
+|+++....
T Consensus 106 ~lvnnAg~~ 114 (277)
T 3gvc_A 106 KLVANAGVV 114 (277)
T ss_dssp EEEECCCCC
T ss_pred EEEECCCCC
Confidence 999998643
No 416
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=82.51 E-value=9.1 Score=39.61 Aligned_cols=77 Identities=12% Similarity=0.136 Sum_probs=50.2
Q ss_pred CEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCC------CCCCCceEEEccCCChhHHHHHHHHHhhccCCcccEEE
Q 003302 44 HAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPI------APIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116 (832)
Q Consensus 44 ~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~------~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVl 116 (832)
.+||=-|++.| ++..++..+ ..++.|+.+|++.- ...+++.++++|+++......+....... +++.|+++
T Consensus 3 K~vlVTGas~G-IG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~-~g~iDiLV 80 (247)
T 3ged_A 3 RGVIVTGGGHG-IGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEK-LQRIDVLV 80 (247)
T ss_dssp CEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHH-HSCCCEEE
T ss_pred CEEEEecCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHH-cCCCCEEE
Confidence 45676677655 444443332 24679999998852 23567889999999987655544433222 27789999
Q ss_pred eCCCCC
Q 003302 117 HDGSPN 122 (832)
Q Consensus 117 sDgapn 122 (832)
++....
T Consensus 81 NNAG~~ 86 (247)
T 3ged_A 81 NNACRG 86 (247)
T ss_dssp ECCCCC
T ss_pred ECCCCC
Confidence 998544
No 417
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=82.32 E-value=3.4 Score=42.22 Aligned_cols=79 Identities=15% Similarity=0.102 Sum_probs=51.2
Q ss_pred CCCEEEEEcCC-cCHHHHHHHHhCC-CCCEEEEEeCCCCC---------CCCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 42 SSHAVLDLCAA-PGGWMQVAVQRVP-VGSLVLGLDLVPIA---------PIRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 42 ~g~~VLDLGcG-PGg~sq~La~~~p-~~~~ViGVDLsp~~---------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
.+.+||=.|++ +|+++..++..+- .+..|++++.++-. ...++.++.+|+++......+...+... .+
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~g 85 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEA-FG 85 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence 35788888986 3777766655432 25689999876520 1234788999999976554444333221 25
Q ss_pred cccEEEeCCCC
Q 003302 111 AFDLVLHDGSP 121 (832)
Q Consensus 111 ~FDlVlsDgap 121 (832)
.+|+|+++...
T Consensus 86 ~iD~lv~~Ag~ 96 (261)
T 2wyu_A 86 GLDYLVHAIAF 96 (261)
T ss_dssp SEEEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 77999999864
No 418
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=82.21 E-value=6 Score=40.46 Aligned_cols=77 Identities=17% Similarity=0.113 Sum_probs=49.7
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC----------CCCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA----------PIRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
.+.+||=.|++.| ++..++..+ ..+..|+.++.++-. .-.++.++++|+++......+...+... ++
T Consensus 10 ~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g 87 (264)
T 3ucx_A 10 TDKVVVISGVGPA-LGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKA-YG 87 (264)
T ss_dssp TTCEEEEESCCTT-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-TS
T ss_pred CCcEEEEECCCcH-HHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence 4678888887665 444333322 236789999887421 1236888999999987655554443322 26
Q ss_pred cccEEEeCCC
Q 003302 111 AFDLVLHDGS 120 (832)
Q Consensus 111 ~FDlVlsDga 120 (832)
.+|+|+++..
T Consensus 88 ~id~lv~nAg 97 (264)
T 3ucx_A 88 RVDVVINNAF 97 (264)
T ss_dssp CCSEEEECCC
T ss_pred CCcEEEECCC
Confidence 7899999974
No 419
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=82.08 E-value=2 Score=45.92 Aligned_cols=90 Identities=21% Similarity=0.216 Sum_probs=52.7
Q ss_pred CCCEEEEEcCCc-CHHHHHHHHhCCCCC-EEEEEeCCCC-----CCCCCceEEEccCCChhHHHHHHHHHhhccCCcccE
Q 003302 42 SSHAVLDLCAAP-GGWMQVAVQRVPVGS-LVLGLDLVPI-----APIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114 (832)
Q Consensus 42 ~g~~VLDLGcGP-Gg~sq~La~~~p~~~-~ViGVDLsp~-----~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDl 114 (832)
+|.+||-+|||+ |.++..+++.+ +. .|++++.++- ..+ ... ..|..+....+.+.... . ..||+
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~--Ga~~Vi~~~~~~~~~~~~~~l--a~~-v~~~~~~~~~~~~~~~~-~---~g~D~ 234 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRAS--GAGPILVSDPNPYRLAFARPY--ADR-LVNPLEEDLLEVVRRVT-G---SGVEV 234 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHT--TCCSEEEECSCHHHHGGGTTT--CSE-EECTTTSCHHHHHHHHH-S---SCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHh--HHh-ccCcCccCHHHHHHHhc-C---CCCCE
Confidence 889999999854 33444455554 34 7999998752 122 211 12333333333343322 2 45799
Q ss_pred EEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 115 VlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
|+.... + ...+..+..+|++||++|+
T Consensus 235 vid~~g----~-------------~~~~~~~~~~l~~~G~iv~ 260 (343)
T 2dq4_A 235 LLEFSG----N-------------EAAIHQGLMALIPGGEARI 260 (343)
T ss_dssp EEECSC----C-------------HHHHHHHHHHEEEEEEEEE
T ss_pred EEECCC----C-------------HHHHHHHHHHHhcCCEEEE
Confidence 996421 1 1234567889999999987
No 420
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=82.07 E-value=6.2 Score=40.25 Aligned_cols=78 Identities=13% Similarity=0.059 Sum_probs=50.6
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC----------CCCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA----------PIRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
.+.+||=.|++ ||++..++..+ ..+..|+.++.++-. .-.++.++.+|+++......+...+... .+
T Consensus 28 ~~k~vlITGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~g 105 (262)
T 3rkr_A 28 SGQVAVVTGAS-RGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAA-HG 105 (262)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHh-cC
Confidence 46788877765 66666655543 235689999887521 1235788999999987655444433221 25
Q ss_pred cccEEEeCCCC
Q 003302 111 AFDLVLHDGSP 121 (832)
Q Consensus 111 ~FDlVlsDgap 121 (832)
.+|+|+++...
T Consensus 106 ~id~lv~~Ag~ 116 (262)
T 3rkr_A 106 RCDVLVNNAGV 116 (262)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 67999999864
No 421
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=81.99 E-value=4.1 Score=42.86 Aligned_cols=69 Identities=20% Similarity=0.111 Sum_probs=45.1
Q ss_pred CEEEEEcCCcCHHHHHHHHhCC---CCCEEEEEeCCCCC-------CC--CCceEEEccCCChhHHHHHHHHHhhccCCc
Q 003302 44 HAVLDLCAAPGGWMQVAVQRVP---VGSLVLGLDLVPIA-------PI--RGAVSLEQDITKPECRARVKKVMEEHGVRA 111 (832)
Q Consensus 44 ~~VLDLGcGPGg~sq~La~~~p---~~~~ViGVDLsp~~-------~i--~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~ 111 (832)
++||=.| |+|+++.+++..+- .+..|++++..+.. .+ +++.++.+|+++.... ...+ ..
T Consensus 5 ~~vlVTG-atG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~---~~~~-----~~ 75 (348)
T 1oc2_A 5 KNIIVTG-GAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELV---DKLA-----AK 75 (348)
T ss_dssp SEEEEET-TTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHH---HHHH-----TT
T ss_pred cEEEEeC-CccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHH---HHHh-----hc
Confidence 3567555 56888777665442 24689999876421 11 4788999999986533 3333 23
Q ss_pred ccEEEeCCCC
Q 003302 112 FDLVLHDGSP 121 (832)
Q Consensus 112 FDlVlsDgap 121 (832)
+|+|+|.+++
T Consensus 76 ~d~vih~A~~ 85 (348)
T 1oc2_A 76 ADAIVHYAAE 85 (348)
T ss_dssp CSEEEECCSC
T ss_pred CCEEEECCcc
Confidence 4999998764
No 422
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=81.95 E-value=9.5 Score=38.92 Aligned_cols=114 Identities=14% Similarity=0.076 Sum_probs=63.2
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEE-eCCCC---------C-CCCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGL-DLVPI---------A-PIRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGV-DLsp~---------~-~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
.+.+||=.|++ ||++..++..+ ..+..|+.+ +...- . .-..+.++++|+++......+...+... +
T Consensus 7 ~~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~ 84 (259)
T 3edm_A 7 TNRTIVVAGAG-RDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADK-F 84 (259)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-h
Confidence 46788877765 45555554433 235688887 43321 0 1235889999999987655444433321 2
Q ss_pred CcccEEEeCCCCC-CCC-C--chhHHhHH---h--HHHHHHHHHHHhhcccCcEEEE
Q 003302 110 RAFDLVLHDGSPN-VGG-A--WAQEAMSQ---N--ALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 110 ~~FDlVlsDgapn-v~g-~--w~~D~~~q---~--~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
+.+|+|+++.... ..+ . ...+.+.. . .-...+++.+...|+++|.+|.
T Consensus 85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~ 141 (259)
T 3edm_A 85 GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVT 141 (259)
T ss_dssp CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEE
T ss_pred CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEE
Confidence 5789999997532 111 1 11121111 1 1123445566667777888876
No 423
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=81.81 E-value=6.6 Score=39.58 Aligned_cols=74 Identities=19% Similarity=0.170 Sum_probs=47.4
Q ss_pred CCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCC-----CCCCCceEEEccCCChhHHHHHHHHHhhccCCcccEEE
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPI-----APIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~-----~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVl 116 (832)
+.+||=.|++ |+++..++..+ ..+..|++++.++- ..++++.++.+|+++......+... .+.+|+|+
T Consensus 6 ~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~id~lv 79 (246)
T 2ag5_A 6 GKVIILTAAA-QGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANE-----VERLDVLF 79 (246)
T ss_dssp TCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHH-----CSCCSEEE
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHH-----hCCCCEEE
Confidence 5677766654 56665555433 23568999988641 1234788899999997654433222 25679999
Q ss_pred eCCCCC
Q 003302 117 HDGSPN 122 (832)
Q Consensus 117 sDgapn 122 (832)
++....
T Consensus 80 ~~Ag~~ 85 (246)
T 2ag5_A 80 NVAGFV 85 (246)
T ss_dssp ECCCCC
T ss_pred ECCccC
Confidence 997643
No 424
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=81.78 E-value=4.2 Score=41.74 Aligned_cols=77 Identities=9% Similarity=0.054 Sum_probs=47.8
Q ss_pred CCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC-----------C--CCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA-----------P--IRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~-----------~--i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
+.+||=.|++ |+++..++..+ ..+..|++++.++-. . -.++.++.+|+++......+...+...
T Consensus 6 ~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~- 83 (278)
T 1spx_A 6 EKVAIITGSS-NGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK- 83 (278)
T ss_dssp TCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH-
T ss_pred CCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH-
Confidence 5677766654 66766665543 235689999877410 1 124788999999976554443333221
Q ss_pred CCcccEEEeCCCC
Q 003302 109 VRAFDLVLHDGSP 121 (832)
Q Consensus 109 ~~~FDlVlsDgap 121 (832)
.+.+|+|+++...
T Consensus 84 ~g~id~lv~~Ag~ 96 (278)
T 1spx_A 84 FGKLDILVNNAGA 96 (278)
T ss_dssp HSCCCEEEECCC-
T ss_pred cCCCCEEEECCCC
Confidence 2567999999754
No 425
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=81.76 E-value=1.7 Score=47.45 Aligned_cols=97 Identities=19% Similarity=0.202 Sum_probs=53.8
Q ss_pred CCCCCEEEEEcCCc-CHHHHHHHHhCCCCCEEEEEeCCCCC----CCCCce-EEEccCC-ChhHHHHHHHHHhhccCCcc
Q 003302 40 LRSSHAVLDLCAAP-GGWMQVAVQRVPVGSLVLGLDLVPIA----PIRGAV-SLEQDIT-KPECRARVKKVMEEHGVRAF 112 (832)
Q Consensus 40 l~~g~~VLDLGcGP-Gg~sq~La~~~p~~~~ViGVDLsp~~----~i~~V~-~i~gDIt-~~~~~~~l~~~L~~~~~~~F 112 (832)
+++|.+||-+|||+ |.++..+++.++ ...|++++.++-. .--++. ++....+ +....+.+.....+ ..|
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g---~g~ 268 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLG-AENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHG---RGA 268 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTT-BSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTT---SCE
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcC-CceEEEEcCCHHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCC---CCC
Confidence 57899999999654 333444555543 1489999987521 111222 2222111 22223334333222 257
Q ss_pred cEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 113 DlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
|+|+.... +. ..+..+..+|++||++|+
T Consensus 269 Dvvid~~g----~~-------------~~~~~~~~~l~~~G~iv~ 296 (380)
T 1vj0_A 269 DFILEATG----DS-------------RALLEGSELLRRGGFYSV 296 (380)
T ss_dssp EEEEECSS----CT-------------THHHHHHHHEEEEEEEEE
T ss_pred cEEEECCC----CH-------------HHHHHHHHHHhcCCEEEE
Confidence 99996431 10 123467889999999987
No 426
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=81.68 E-value=4.6 Score=41.66 Aligned_cols=79 Identities=11% Similarity=0.129 Sum_probs=51.0
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC-----------CCCCceEEEccCCCh-hHHHHHHHHHhhcc
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKP-ECRARVKKVMEEHG 108 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~-~~~~~l~~~L~~~~ 108 (832)
.+.+||=.|++ ||++..++..+ ..+..|++++.+.-. ...++.++.+|+++. .....+...+...
T Consensus 11 ~~k~vlITGas-~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~- 88 (311)
T 3o26_A 11 KRRCAVVTGGN-KGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH- 88 (311)
T ss_dssp -CCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH-
T ss_pred CCcEEEEecCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh-
Confidence 45678866665 66666555443 236689999887421 123688999999997 6555555444322
Q ss_pred CCcccEEEeCCCCC
Q 003302 109 VRAFDLVLHDGSPN 122 (832)
Q Consensus 109 ~~~FDlVlsDgapn 122 (832)
.+.+|+|+++....
T Consensus 89 ~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 89 FGKLDILVNNAGVA 102 (311)
T ss_dssp HSSCCEEEECCCCC
T ss_pred CCCCCEEEECCccc
Confidence 25679999998643
No 427
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=81.68 E-value=1.8 Score=46.74 Aligned_cols=94 Identities=16% Similarity=0.160 Sum_probs=54.4
Q ss_pred CCCCCEEEEEcCC--cCHHHHHHHHhCCCCCEEEEEeCCCCC----CCCCceEEEccCCChhHHHHHHHHHhhccCCccc
Q 003302 40 LRSSHAVLDLCAA--PGGWMQVAVQRVPVGSLVLGLDLVPIA----PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFD 113 (832)
Q Consensus 40 l~~g~~VLDLGcG--PGg~sq~La~~~p~~~~ViGVDLsp~~----~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FD 113 (832)
+++|.+||-+||+ -|..+..++... ++.|++++.++-. .--++.. ..|..+......+...... ..||
T Consensus 168 ~~~g~~vlV~GasggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~ga~~-~~d~~~~~~~~~~~~~~~~---~~~D 241 (351)
T 1yb5_A 168 VKAGESVLVHGASGGVGLAACQIARAY--GLKILGTAGTEEGQKIVLQNGAHE-VFNHREVNYIDKIKKYVGE---KGID 241 (351)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTCSE-EEETTSTTHHHHHHHHHCT---TCEE
T ss_pred CCCcCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChhHHHHHHHcCCCE-EEeCCCchHHHHHHHHcCC---CCcE
Confidence 5789999999973 233333444444 4689999987521 0012221 2244444444444443332 3579
Q ss_pred EEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 114 LVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 114 lVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
+|+.... + ..+..++.+|++||++|+
T Consensus 242 ~vi~~~G----~--------------~~~~~~~~~l~~~G~iv~ 267 (351)
T 1yb5_A 242 IIIEMLA----N--------------VNLSKDLSLLSHGGRVIV 267 (351)
T ss_dssp EEEESCH----H--------------HHHHHHHHHEEEEEEEEE
T ss_pred EEEECCC----h--------------HHHHHHHHhccCCCEEEE
Confidence 9997531 1 123456789999999987
No 428
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=81.65 E-value=11 Score=38.68 Aligned_cols=79 Identities=19% Similarity=0.171 Sum_probs=50.9
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC------C-CCCceEEEccCCChhHHHHHHHHHhhccCCccc
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA------P-IRGAVSLEQDITKPECRARVKKVMEEHGVRAFD 113 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~------~-i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FD 113 (832)
.+.+||=.|++ ||++..++..+ ..+..|+.++.++-. . -.++.++++|+++......+...+... ++.+|
T Consensus 10 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~id 87 (271)
T 3tzq_B 10 ENKVAIITGAC-GGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDT-FGRLD 87 (271)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHH-HSCCC
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHH-cCCCC
Confidence 36788877765 55555554433 235689999987632 1 135888999999976555444433221 25779
Q ss_pred EEEeCCCCC
Q 003302 114 LVLHDGSPN 122 (832)
Q Consensus 114 lVlsDgapn 122 (832)
+|+++....
T Consensus 88 ~lv~nAg~~ 96 (271)
T 3tzq_B 88 IVDNNAAHS 96 (271)
T ss_dssp EEEECCCCC
T ss_pred EEEECCCCC
Confidence 999998643
No 429
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=81.65 E-value=14 Score=37.66 Aligned_cols=115 Identities=11% Similarity=-0.014 Sum_probs=65.8
Q ss_pred CCCEEEEEcCCcC-HHHHHHHHhC-CCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 42 SSHAVLDLCAAPG-GWMQVAVQRV-PVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 42 ~g~~VLDLGcGPG-g~sq~La~~~-p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
.|.++|=-|++.+ |++..++..+ ..++.|+.++.+.-. .-+++.++++|+++......+...+...
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~- 83 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKD- 83 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHH-
Confidence 4788888898652 4444433322 236789999887421 1246889999999976554444333221
Q ss_pred CCcccEEEeCCCCCCCC----C---chhHHhHHh-----HHHHHHHHHHHhhcccCcEEEE
Q 003302 109 VRAFDLVLHDGSPNVGG----A---WAQEAMSQN-----ALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 109 ~~~FDlVlsDgapnv~g----~---w~~D~~~q~-----~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
++.+|+++++....... . ...+.+... ..+....+.+..+++.||.+|.
T Consensus 84 ~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVn 144 (256)
T 4fs3_A 84 VGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVA 144 (256)
T ss_dssp HCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEE
T ss_pred hCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEE
Confidence 27789999986532111 0 011222110 1112334456677888999886
No 430
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=81.64 E-value=7.2 Score=40.40 Aligned_cols=78 Identities=18% Similarity=0.131 Sum_probs=49.8
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC-------CCCCceEEEccCCChhHHHHHHHHHhhccCCccc
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA-------PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFD 113 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~-------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FD 113 (832)
.+.+||=.|++ ||++..++..+ ..+..|+.++.++-. .-.++.++++|+++......+...+... .+.+|
T Consensus 4 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~iD 81 (281)
T 3zv4_A 4 TGEVALITGGA-SGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAA-FGKID 81 (281)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHH-HSCCC
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHh-cCCCC
Confidence 35778878876 45555554433 235789999877421 1135888999999976554444433221 26779
Q ss_pred EEEeCCCC
Q 003302 114 LVLHDGSP 121 (832)
Q Consensus 114 lVlsDgap 121 (832)
+|+++...
T Consensus 82 ~lvnnAg~ 89 (281)
T 3zv4_A 82 TLIPNAGI 89 (281)
T ss_dssp EEECCCCC
T ss_pred EEEECCCc
Confidence 99999754
No 431
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=81.46 E-value=3.9 Score=41.49 Aligned_cols=114 Identities=16% Similarity=0.078 Sum_probs=63.2
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCC-CCCEEEEEeC-CCCC----------CCCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVP-VGSLVLGLDL-VPIA----------PIRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p-~~~~ViGVDL-sp~~----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
.+.+||=.|+ +|+++..++..+- .+..|++++. ++-. .-.++.++.+|+++......+...+... .
T Consensus 20 ~~k~vlItGa-sggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~ 97 (274)
T 1ja9_A 20 AGKVALTTGA-GRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH-F 97 (274)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH-H
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH-c
Confidence 4667885664 5777776665442 3568998887 3210 0235788999999976554443333221 2
Q ss_pred CcccEEEeCCCCCCCCCc---hhHHhHH-----hHHHHHHHHHHHhhcccCcEEEE
Q 003302 110 RAFDLVLHDGSPNVGGAW---AQEAMSQ-----NALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 110 ~~FDlVlsDgapnv~g~w---~~D~~~q-----~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
+.+|+|+++......+.. ..+.+.. ..-...+++.+...++.||.||+
T Consensus 98 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~ 153 (274)
T 1ja9_A 98 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIIL 153 (274)
T ss_dssp SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEE
Confidence 567999998754322211 1111110 01122334455566666788876
No 432
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=81.44 E-value=3.2 Score=42.92 Aligned_cols=77 Identities=10% Similarity=0.066 Sum_probs=48.2
Q ss_pred CCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC---------C-CC---CceEEEccCCChhHHHHHHHHHhhcc
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA---------P-IR---GAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~---------~-i~---~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
+.+||=.|+ +|+++..++..+ ..+..|++++.++-. . -. ++.++.+|+++......+...+...
T Consensus 6 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~- 83 (280)
T 1xkq_A 6 NKTVIITGS-SNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ- 83 (280)
T ss_dssp TCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH-
T ss_pred CCEEEEECC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh-
Confidence 567776675 456665555433 235689999887421 1 11 5788999999986554444333221
Q ss_pred CCcccEEEeCCCC
Q 003302 109 VRAFDLVLHDGSP 121 (832)
Q Consensus 109 ~~~FDlVlsDgap 121 (832)
.+.+|+|+++...
T Consensus 84 ~g~iD~lv~nAg~ 96 (280)
T 1xkq_A 84 FGKIDVLVNNAGA 96 (280)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 2567999999854
No 433
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=81.42 E-value=14 Score=37.72 Aligned_cols=77 Identities=18% Similarity=0.179 Sum_probs=48.9
Q ss_pred CCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC------CC-CCceEEEccCCChhHHHHHHHHHhhccCCcccE
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA------PI-RGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~------~i-~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDl 114 (832)
+.+||=.|++ ||++..++..+ ..+..|+.++.++-. .+ .++.++++|+++......+...+... .+.+|+
T Consensus 6 ~k~vlITGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~g~iD~ 83 (263)
T 2a4k_A 6 GKTILVTGAA-SGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEE-FGRLHG 83 (263)
T ss_dssp TCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHH-HSCCCE
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHH-cCCCcE
Confidence 5678877764 56666555443 235689999887421 12 36788999999976554443333221 256799
Q ss_pred EEeCCCC
Q 003302 115 VLHDGSP 121 (832)
Q Consensus 115 VlsDgap 121 (832)
|+++...
T Consensus 84 lvnnAg~ 90 (263)
T 2a4k_A 84 VAHFAGV 90 (263)
T ss_dssp EEEGGGG
T ss_pred EEECCCC
Confidence 9999753
No 434
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=81.30 E-value=5.2 Score=41.13 Aligned_cols=77 Identities=17% Similarity=0.164 Sum_probs=49.4
Q ss_pred CCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC------C-CCCceEEEccCCChhHHHHHHHHHhhccCCcccE
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA------P-IRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~------~-i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDl 114 (832)
+.+||=.| |+|+++.+++..+ ..+..|++++.++-. . -.++.++++|+++......+...+... .+.+|+
T Consensus 5 ~k~vlVTG-as~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-~g~id~ 82 (281)
T 3m1a_A 5 AKVWLVTG-ASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLAR-YGRVDV 82 (281)
T ss_dssp CCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHH-HSCCSE
T ss_pred CcEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHh-CCCCCE
Confidence 45677555 4577776665543 235689999887522 1 246889999999976554444333221 256799
Q ss_pred EEeCCCC
Q 003302 115 VLHDGSP 121 (832)
Q Consensus 115 VlsDgap 121 (832)
|+++++.
T Consensus 83 lv~~Ag~ 89 (281)
T 3m1a_A 83 LVNNAGR 89 (281)
T ss_dssp EEECCCC
T ss_pred EEECCCc
Confidence 9999864
No 435
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=81.26 E-value=4.4 Score=41.59 Aligned_cols=79 Identities=11% Similarity=0.105 Sum_probs=50.3
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
.+.+||=.|++ ||++..++..+ ..+..|+.++.++-. .-.++.++++|+++......+...+... .
T Consensus 19 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~ 96 (266)
T 4egf_A 19 DGKRALITGAT-KGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEA-F 96 (266)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHH-H
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH-c
Confidence 46778866665 55665555443 236689999887421 1235889999999987555444433221 2
Q ss_pred CcccEEEeCCCCC
Q 003302 110 RAFDLVLHDGSPN 122 (832)
Q Consensus 110 ~~FDlVlsDgapn 122 (832)
+.+|+|+++....
T Consensus 97 g~id~lv~nAg~~ 109 (266)
T 4egf_A 97 GGLDVLVNNAGIS 109 (266)
T ss_dssp TSCSEEEEECCCC
T ss_pred CCCCEEEECCCcC
Confidence 5679999998643
No 436
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=81.21 E-value=7.4 Score=39.58 Aligned_cols=79 Identities=15% Similarity=0.082 Sum_probs=50.0
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC-------------CCCCceEEEccCCChhHHHHHHHHHhhc
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA-------------PIRGAVSLEQDITKPECRARVKKVMEEH 107 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~-------------~i~~V~~i~gDIt~~~~~~~l~~~L~~~ 107 (832)
.+.+||=.|++ ||++..++..+ ..+..|+.++.++-. ...++.++.+|+++......+...+...
T Consensus 6 ~~k~~lVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (250)
T 3nyw_A 6 QKGLAIITGAS-QGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK 84 (250)
T ss_dssp CCCEEEEESTT-SHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence 35678877776 45554444332 225689999887421 1256889999999976554444433221
Q ss_pred cCCcccEEEeCCCCC
Q 003302 108 GVRAFDLVLHDGSPN 122 (832)
Q Consensus 108 ~~~~FDlVlsDgapn 122 (832)
.+.+|+|+++....
T Consensus 85 -~g~iD~lvnnAg~~ 98 (250)
T 3nyw_A 85 -YGAVDILVNAAAMF 98 (250)
T ss_dssp -HCCEEEEEECCCCC
T ss_pred -cCCCCEEEECCCcC
Confidence 26789999998654
No 437
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=81.06 E-value=7 Score=40.52 Aligned_cols=77 Identities=12% Similarity=0.128 Sum_probs=49.8
Q ss_pred CCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC---------------CCCCceEEEccCCChhHHHHHHHHHhh
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA---------------PIRGAVSLEQDITKPECRARVKKVMEE 106 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~---------------~i~~V~~i~gDIt~~~~~~~l~~~L~~ 106 (832)
+.+||=.|+ +|+++..++..+ ..+..|++++.++-. .-.++.++++|+++......+...+..
T Consensus 18 ~k~vlVTGa-sggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 96 (303)
T 1yxm_A 18 GQVAIVTGG-ATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD 96 (303)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHH
Confidence 578887775 577776665543 235689999876410 123588999999997655444333322
Q ss_pred ccCCcccEEEeCCCC
Q 003302 107 HGVRAFDLVLHDGSP 121 (832)
Q Consensus 107 ~~~~~FDlVlsDgap 121 (832)
. .+.+|+|++++..
T Consensus 97 ~-~g~id~li~~Ag~ 110 (303)
T 1yxm_A 97 T-FGKINFLVNNGGG 110 (303)
T ss_dssp H-HSCCCEEEECCCC
T ss_pred H-cCCCCEEEECCCC
Confidence 1 1567999999864
No 438
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=80.94 E-value=6 Score=40.32 Aligned_cols=79 Identities=18% Similarity=0.192 Sum_probs=49.9
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC----------CCCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA----------PIRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
.+.+||=.|++ ||++..++..+ ..+..|+.++.++-. .-.++.++++|+++......+...+... .+
T Consensus 11 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g 88 (256)
T 3gaf_A 11 NDAVAIVTGAA-AGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQ-FG 88 (256)
T ss_dssp TTCEEEECSCS-SHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence 46788877765 45555444432 225689999887421 1246888999999986555444433221 25
Q ss_pred cccEEEeCCCCC
Q 003302 111 AFDLVLHDGSPN 122 (832)
Q Consensus 111 ~FDlVlsDgapn 122 (832)
.+|+|+++....
T Consensus 89 ~id~lv~nAg~~ 100 (256)
T 3gaf_A 89 KITVLVNNAGGG 100 (256)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 679999998543
No 439
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=80.85 E-value=15 Score=37.64 Aligned_cols=79 Identities=15% Similarity=0.124 Sum_probs=49.1
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCC----------C-------------CCCCceEEEccCCChhHH
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPI----------A-------------PIRGAVSLEQDITKPECR 97 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~----------~-------------~i~~V~~i~gDIt~~~~~ 97 (832)
.+.+||=.|++. |++..++..+ ..+..|+++|...- . .-..+.++++|+++....
T Consensus 14 ~gk~~lVTGas~-gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 92 (280)
T 3pgx_A 14 QGRVAFITGAAR-GQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL 92 (280)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred CCCEEEEECCCc-HHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence 467888788764 5555444433 23678999987420 0 113578899999998655
Q ss_pred HHHHHHHhhccCCcccEEEeCCCCC
Q 003302 98 ARVKKVMEEHGVRAFDLVLHDGSPN 122 (832)
Q Consensus 98 ~~l~~~L~~~~~~~FDlVlsDgapn 122 (832)
..+...+... .+.+|+|+++....
T Consensus 93 ~~~~~~~~~~-~g~id~lvnnAg~~ 116 (280)
T 3pgx_A 93 RELVADGMEQ-FGRLDVVVANAGVL 116 (280)
T ss_dssp HHHHHHHHHH-HCCCCEEEECCCCC
T ss_pred HHHHHHHHHH-cCCCCEEEECCCCC
Confidence 5444433221 25779999998643
No 440
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=80.81 E-value=5.7 Score=40.79 Aligned_cols=78 Identities=19% Similarity=0.098 Sum_probs=50.5
Q ss_pred CCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC-----CCCCceEEEccCCChhHHHHHHHHHhhccCCcccEEE
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA-----PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVL 116 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~-----~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVl 116 (832)
+.+||=.|++ ||++..++..+ ..+..|+.++.++-. .-.++.++.+|+++......+...+... .+.+|+|+
T Consensus 27 ~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~iD~lv 104 (260)
T 3gem_A 27 SAPILITGAS-QRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQ-TSSLRAVV 104 (260)
T ss_dssp CCCEEESSTT-SHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHH-CSCCSEEE
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHh-cCCCCEEE
Confidence 5677766755 66666555443 235689999887632 1125788999999987655554444322 26789999
Q ss_pred eCCCCC
Q 003302 117 HDGSPN 122 (832)
Q Consensus 117 sDgapn 122 (832)
++....
T Consensus 105 ~nAg~~ 110 (260)
T 3gem_A 105 HNASEW 110 (260)
T ss_dssp ECCCCC
T ss_pred ECCCcc
Confidence 998643
No 441
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=80.75 E-value=9.5 Score=38.53 Aligned_cols=79 Identities=16% Similarity=0.177 Sum_probs=49.9
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCC-CC-------CCCCceEEEccCCChhHHHHHHHHHhhccCCcc
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVP-IA-------PIRGAVSLEQDITKPECRARVKKVMEEHGVRAF 112 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp-~~-------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~F 112 (832)
.+.+||=.|++ |+++..++..+ ..+..|++++.++ -. .-.++.++++|+++......+...+... .+.+
T Consensus 6 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~i 83 (249)
T 2ew8_A 6 KDKLAVITGGA-NGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVIST-FGRC 83 (249)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-HSCC
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH-cCCC
Confidence 35678877755 56666555443 2356899998876 11 1135788999999976554443333221 2567
Q ss_pred cEEEeCCCCC
Q 003302 113 DLVLHDGSPN 122 (832)
Q Consensus 113 DlVlsDgapn 122 (832)
|+|+++....
T Consensus 84 d~lv~nAg~~ 93 (249)
T 2ew8_A 84 DILVNNAGIY 93 (249)
T ss_dssp CEEEECCCCC
T ss_pred CEEEECCCCC
Confidence 9999998643
No 442
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=80.68 E-value=4.2 Score=43.93 Aligned_cols=95 Identities=13% Similarity=0.090 Sum_probs=53.0
Q ss_pred CCCCCEEEEEcCCc-CHHHHHHHHhCCCCCEEEEEeCCCCCC----CCCceEEEccCCC--hhHHHHHHHHHhhccCCcc
Q 003302 40 LRSSHAVLDLCAAP-GGWMQVAVQRVPVGSLVLGLDLVPIAP----IRGAVSLEQDITK--PECRARVKKVMEEHGVRAF 112 (832)
Q Consensus 40 l~~g~~VLDLGcGP-Gg~sq~La~~~p~~~~ViGVDLsp~~~----i~~V~~i~gDIt~--~~~~~~l~~~L~~~~~~~F 112 (832)
+++|.+||-+|||+ |.++..+++.++ ...|++++.++-.. --++..+ .|..+ ....+.+..... +.|
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~~G-a~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~v~~~~~----~g~ 261 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKVAG-ASRIIGVDINKDKFARAKEFGATEC-INPQDFSKPIQEVLIEMTD----GGV 261 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGHHHHHHHTCSEE-ECGGGCSSCHHHHHHHHTT----SCB
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHHcCCceE-eccccccccHHHHHHHHhC----CCC
Confidence 57899999999754 334444455543 23899999876321 0122211 12221 122233333222 357
Q ss_pred cEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccC-cEEEE
Q 003302 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPK-GTFVT 157 (832)
Q Consensus 113 DlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpG-G~fV~ 157 (832)
|+|+... ++ ...+..+..+|++| |++|+
T Consensus 262 D~vid~~----g~-------------~~~~~~~~~~l~~~~G~iv~ 290 (373)
T 2fzw_A 262 DYSFECI----GN-------------VKVMRAALEACHKGWGVSVV 290 (373)
T ss_dssp SEEEECS----CC-------------HHHHHHHHHTBCTTTCEEEE
T ss_pred CEEEECC----Cc-------------HHHHHHHHHhhccCCcEEEE
Confidence 9999642 11 12345678999999 99987
No 443
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=80.62 E-value=14 Score=38.02 Aligned_cols=79 Identities=13% Similarity=0.113 Sum_probs=50.4
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC----------------------CCCCceEEEccCCChhHHH
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA----------------------PIRGAVSLEQDITKPECRA 98 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~----------------------~i~~V~~i~gDIt~~~~~~ 98 (832)
.+.+||=.|++ ||++..++..+ ..+..|+.++.++-. .-..+.++++|+++.....
T Consensus 9 ~~k~~lVTGas-~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 87 (281)
T 3s55_A 9 EGKTALITGGA-RGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALE 87 (281)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence 36788878866 55665555443 236789999886311 1135788999999986555
Q ss_pred HHHHHHhhccCCcccEEEeCCCCC
Q 003302 99 RVKKVMEEHGVRAFDLVLHDGSPN 122 (832)
Q Consensus 99 ~l~~~L~~~~~~~FDlVlsDgapn 122 (832)
.+...+... .+.+|+|+++....
T Consensus 88 ~~~~~~~~~-~g~id~lv~nAg~~ 110 (281)
T 3s55_A 88 SFVAEAEDT-LGGIDIAITNAGIS 110 (281)
T ss_dssp HHHHHHHHH-HTCCCEEEECCCCC
T ss_pred HHHHHHHHh-cCCCCEEEECCCCC
Confidence 444433221 25679999998643
No 444
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=80.40 E-value=12 Score=37.26 Aligned_cols=77 Identities=17% Similarity=0.164 Sum_probs=48.3
Q ss_pred CCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCC----------CC-CCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPI----------AP-IRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~----------~~-i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
+.+||=.|++ |+++..++..+ ..+..|++++.++- .. -.++.++.+|++++.....+...+... .+
T Consensus 2 ~k~vlItGas-ggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 79 (250)
T 2cfc_A 2 SRVAIVTGAS-SGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQ-FG 79 (250)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred CCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH-hC
Confidence 3567767754 67776665543 23568999987641 11 134788999999976554444333221 15
Q ss_pred cccEEEeCCCC
Q 003302 111 AFDLVLHDGSP 121 (832)
Q Consensus 111 ~FDlVlsDgap 121 (832)
.+|+|+++...
T Consensus 80 ~id~li~~Ag~ 90 (250)
T 2cfc_A 80 AIDVLVNNAGI 90 (250)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 67999999754
No 445
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=80.35 E-value=8 Score=39.74 Aligned_cols=74 Identities=15% Similarity=0.152 Sum_probs=48.8
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC------CC-CCceEEEccCCChhHHHHHHHHHhhccCCccc
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA------PI-RGAVSLEQDITKPECRARVKKVMEEHGVRAFD 113 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~------~i-~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FD 113 (832)
.+.+||=.|++ ||++..++..+ ..+..|+.++.++-. .+ .++.++++|+++......+...+. ..+.+|
T Consensus 29 ~~k~vlVTGas-~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~--~~~~id 105 (281)
T 3ppi_A 29 EGASAIVSGGA-GGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAAN--QLGRLR 105 (281)
T ss_dssp TTEEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHT--TSSEEE
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHH--HhCCCC
Confidence 35678877865 55555544433 236689999887421 11 358899999999876655555552 236789
Q ss_pred EEEeC
Q 003302 114 LVLHD 118 (832)
Q Consensus 114 lVlsD 118 (832)
+|+++
T Consensus 106 ~lv~~ 110 (281)
T 3ppi_A 106 YAVVA 110 (281)
T ss_dssp EEEEC
T ss_pred eEEEc
Confidence 99998
No 446
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=80.15 E-value=9 Score=38.40 Aligned_cols=78 Identities=15% Similarity=0.103 Sum_probs=50.5
Q ss_pred CCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC----------CCCCceEEEccCCChhHHHHHHHHHhhccCCc
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA----------PIRGAVSLEQDITKPECRARVKKVMEEHGVRA 111 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~ 111 (832)
+.+||=.|++ |+++..++..+ ..+..|++++.++-. .-..+.++++|+++......+...+... .+.
T Consensus 5 ~k~vlITGas-~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 82 (247)
T 3lyl_A 5 EKVALVTGAS-RGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAE-NLA 82 (247)
T ss_dssp TCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHT-TCC
T ss_pred CCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH-cCC
Confidence 5677766754 66665554433 235689999887521 1246888999999987655554444332 367
Q ss_pred ccEEEeCCCCC
Q 003302 112 FDLVLHDGSPN 122 (832)
Q Consensus 112 FDlVlsDgapn 122 (832)
+|+|+++....
T Consensus 83 id~li~~Ag~~ 93 (247)
T 3lyl_A 83 IDILVNNAGIT 93 (247)
T ss_dssp CSEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 89999998643
No 447
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=80.06 E-value=7 Score=40.49 Aligned_cols=79 Identities=10% Similarity=0.093 Sum_probs=50.5
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC------C-CCCceEEEccCCChhHHHHHHHHHhhccCCccc
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA------P-IRGAVSLEQDITKPECRARVKKVMEEHGVRAFD 113 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~------~-i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FD 113 (832)
.+.+||=.|++ ||++..++..+ ..+..|+.++.++-. . -..+.++++|+++......+...+... .+.+|
T Consensus 26 ~~k~vlVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g~iD 103 (277)
T 4dqx_A 26 NQRVCIVTGGG-SGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAK-WGRVD 103 (277)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHH-HSCCC
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH-cCCCC
Confidence 46788877866 55665554433 236689999887521 1 135788999999986555444433221 25679
Q ss_pred EEEeCCCCC
Q 003302 114 LVLHDGSPN 122 (832)
Q Consensus 114 lVlsDgapn 122 (832)
+|+++....
T Consensus 104 ~lv~nAg~~ 112 (277)
T 4dqx_A 104 VLVNNAGFG 112 (277)
T ss_dssp EEEECCCCC
T ss_pred EEEECCCcC
Confidence 999998643
No 448
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=79.99 E-value=5.3 Score=40.33 Aligned_cols=78 Identities=15% Similarity=0.134 Sum_probs=48.1
Q ss_pred CCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC------CC-----------CCceEEEccCCChhHHHHHHHHH
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA------PI-----------RGAVSLEQDITKPECRARVKKVM 104 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~------~i-----------~~V~~i~gDIt~~~~~~~l~~~L 104 (832)
+.+||=.|++ |+++..++..+ ..+..|++++.++-. .+ .++.++.+|+++......+...+
T Consensus 7 ~k~vlITGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 85 (264)
T 2pd6_A 7 SALALVTGAG-SGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQV 85 (264)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHH
Confidence 5677766654 66666655443 235689999876410 11 45888999999976544443333
Q ss_pred hhccCCcc-cEEEeCCCCC
Q 003302 105 EEHGVRAF-DLVLHDGSPN 122 (832)
Q Consensus 105 ~~~~~~~F-DlVlsDgapn 122 (832)
... .+.+ |+|++++...
T Consensus 86 ~~~-~g~i~d~vi~~Ag~~ 103 (264)
T 2pd6_A 86 QAC-FSRPPSVVVSCAGIT 103 (264)
T ss_dssp HHH-HSSCCSEEEECCCCC
T ss_pred HHH-hCCCCeEEEECCCcC
Confidence 221 2556 9999997643
No 449
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=79.91 E-value=10 Score=39.14 Aligned_cols=78 Identities=9% Similarity=0.021 Sum_probs=50.8
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
.+.+||=.|++ ||++..++..+ ..+..|+.++.+.-. .-.++.++++|+++......+...+... .
T Consensus 26 ~~k~~lVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~ 103 (277)
T 4fc7_A 26 RDKVAFITGGG-SGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKE-F 103 (277)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence 46788878865 55665555443 346689999887421 1235888999999986554444433221 2
Q ss_pred CcccEEEeCCCC
Q 003302 110 RAFDLVLHDGSP 121 (832)
Q Consensus 110 ~~FDlVlsDgap 121 (832)
+.+|+|+++...
T Consensus 104 g~id~lv~nAg~ 115 (277)
T 4fc7_A 104 GRIDILINCAAG 115 (277)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCcC
Confidence 577999999863
No 450
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=79.91 E-value=2.1 Score=45.91 Aligned_cols=86 Identities=10% Similarity=0.014 Sum_probs=52.1
Q ss_pred CCCCCEEEEEcCCc-CHHHHHHHHhCCCCCEEEEEeCCCCCC----CCCceEEEccCCChhHHHHHHHHHhhccCCcccE
Q 003302 40 LRSSHAVLDLCAAP-GGWMQVAVQRVPVGSLVLGLDLVPIAP----IRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114 (832)
Q Consensus 40 l~~g~~VLDLGcGP-Gg~sq~La~~~p~~~~ViGVDLsp~~~----i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDl 114 (832)
+++|.+||-+|||+ |.++..+++.++ +.|++++.++-.. --++..+.. +.. .+. ..||+
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~lGa~~v~~---~~~-------~~~----~~~D~ 237 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVAMG--AEVSVFARNEHKKQDALSMGVKHFYT---DPK-------QCK----EELDF 237 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHTT--CEEEEECSSSTTHHHHHHTTCSEEES---SGG-------GCC----SCEEE
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHhcCCCeecC---CHH-------HHh----cCCCE
Confidence 57899999999865 555556666654 5899999887431 112222222 211 011 25799
Q ss_pred EEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEE
Q 003302 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTK 158 (832)
Q Consensus 115 VlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~K 158 (832)
|+.... +. ..+..++.+|+|||++++.
T Consensus 238 vid~~g----~~-------------~~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 238 IISTIP----TH-------------YDLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp EEECCC----SC-------------CCHHHHHTTEEEEEEEEEC
T ss_pred EEECCC----cH-------------HHHHHHHHHHhcCCEEEEE
Confidence 986421 11 0133577899999999973
No 451
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=79.80 E-value=5.3 Score=41.34 Aligned_cols=78 Identities=6% Similarity=0.032 Sum_probs=50.3
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC------C-----CCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA------P-----IRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~------~-----i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
.+.+||=.|++ |+++..++..+ ..+..|++++.++-. . -.++.++.+|+++......+...+... .
T Consensus 25 ~~k~vlITGas-ggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~ 102 (302)
T 1w6u_A 25 QGKVAFITGGG-TGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV-A 102 (302)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH-T
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHH-c
Confidence 35778877754 66766665543 235689999887421 0 235888999999976554444333221 2
Q ss_pred CcccEEEeCCCC
Q 003302 110 RAFDLVLHDGSP 121 (832)
Q Consensus 110 ~~FDlVlsDgap 121 (832)
+.+|+|+++++.
T Consensus 103 g~id~li~~Ag~ 114 (302)
T 1w6u_A 103 GHPNIVINNAAG 114 (302)
T ss_dssp CSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 677999999864
No 452
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=79.73 E-value=6.1 Score=39.80 Aligned_cols=78 Identities=17% Similarity=0.199 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC----------CCCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA----------PIRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
.+.+||=.|++ ||++..++..+ ..+..|+.++.++-. .-..+.++.+|+++......+...+... .+
T Consensus 8 ~~k~vlITGas-~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g 85 (253)
T 3qiv_A 8 ENKVGIVTGSG-GGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE-FG 85 (253)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH-HS
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence 46788877765 55665555443 235689999887421 1235788999999986555444433221 25
Q ss_pred cccEEEeCCCC
Q 003302 111 AFDLVLHDGSP 121 (832)
Q Consensus 111 ~FDlVlsDgap 121 (832)
.+|+|++++..
T Consensus 86 ~id~li~~Ag~ 96 (253)
T 3qiv_A 86 GIDYLVNNAAI 96 (253)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 67999999764
No 453
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=79.59 E-value=17 Score=36.92 Aligned_cols=79 Identities=19% Similarity=0.228 Sum_probs=50.0
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC------CC-CCceEEEccCCChhHHHHHHHHHhhccCCccc
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA------PI-RGAVSLEQDITKPECRARVKKVMEEHGVRAFD 113 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~------~i-~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FD 113 (832)
.+.+||=.|++ |+++..++..+ ..+..|++++.++-. .+ .++.++++|+++......+...+... .+.+|
T Consensus 11 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~-~g~iD 88 (263)
T 3ak4_A 11 SGRKAIVTGGS-KGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDA-LGGFD 88 (263)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHH-HTCCC
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHH-cCCCC
Confidence 36788877765 66666655443 235689999887421 12 26788999999976554443333221 25679
Q ss_pred EEEeCCCCC
Q 003302 114 LVLHDGSPN 122 (832)
Q Consensus 114 lVlsDgapn 122 (832)
+|+++....
T Consensus 89 ~lv~~Ag~~ 97 (263)
T 3ak4_A 89 LLCANAGVS 97 (263)
T ss_dssp EEEECCCCC
T ss_pred EEEECCCcC
Confidence 999997643
No 454
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=79.40 E-value=3.2 Score=44.41 Aligned_cols=94 Identities=23% Similarity=0.170 Sum_probs=55.0
Q ss_pred CCCCCEEEEEcCC--cCHHHHHHHHhCCCCCEEEEEeCCCCC----CCCCceEEEccCCC-hhHHHHHHHHHhhccCCcc
Q 003302 40 LRSSHAVLDLCAA--PGGWMQVAVQRVPVGSLVLGLDLVPIA----PIRGAVSLEQDITK-PECRARVKKVMEEHGVRAF 112 (832)
Q Consensus 40 l~~g~~VLDLGcG--PGg~sq~La~~~p~~~~ViGVDLsp~~----~i~~V~~i~gDIt~-~~~~~~l~~~L~~~~~~~F 112 (832)
+++|.+||-+||+ -|..+..++... +..|++++.++-. .--++.. ..|+++ ......+..... +.|
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~V~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~----~~~ 239 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAM--GYRVLGIDGGEGKEELFRSIGGEV-FIDFTKEKDIVGAVLKATD----GGA 239 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECSTTHHHHHHHTTCCE-EEETTTCSCHHHHHHHHHT----SCE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC--CCcEEEEcCCHHHHHHHHHcCCce-EEecCccHhHHHHHHHHhC----CCC
Confidence 5789999999983 344444444444 4589999987632 0012222 225542 233333333322 257
Q ss_pred cEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 113 DLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 113 DlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
|+|+.... + ...+..+..+|++||++|+
T Consensus 240 D~vi~~~g----~-------------~~~~~~~~~~l~~~G~iv~ 267 (347)
T 2hcy_A 240 HGVINVSV----S-------------EAAIEASTRYVRANGTTVL 267 (347)
T ss_dssp EEEEECSS----C-------------HHHHHHHTTSEEEEEEEEE
T ss_pred CEEEECCC----c-------------HHHHHHHHHHHhcCCEEEE
Confidence 99998642 1 1234567899999999987
No 455
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=79.39 E-value=15 Score=37.49 Aligned_cols=79 Identities=11% Similarity=0.043 Sum_probs=50.7
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC----------CCCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA----------PIRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
.+.+||=.|+ +|+++..++..+ ..+..|++++.++-. .-.++.++.+|+++......+...+... .+
T Consensus 30 ~~k~vlITGa-sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~g 107 (272)
T 1yb1_A 30 TGEIVLITGA-GHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE-IG 107 (272)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-TC
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHH-CC
Confidence 3567886775 466776665543 235689999887521 0135888999999976554444433221 25
Q ss_pred cccEEEeCCCCC
Q 003302 111 AFDLVLHDGSPN 122 (832)
Q Consensus 111 ~FDlVlsDgapn 122 (832)
.+|+|++++...
T Consensus 108 ~iD~li~~Ag~~ 119 (272)
T 1yb1_A 108 DVSILVNNAGVV 119 (272)
T ss_dssp CCSEEEECCCCC
T ss_pred CCcEEEECCCcC
Confidence 679999998643
No 456
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=79.02 E-value=15 Score=37.60 Aligned_cols=79 Identities=13% Similarity=0.093 Sum_probs=49.7
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
.+.+||=.|+ +||++..++..+ ..+..|+.++..... .-.++.++.+|+++......+...+... .
T Consensus 24 ~~k~vlITGa-s~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~ 101 (269)
T 3gk3_A 24 AKRVAFVTGG-MGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLAD-F 101 (269)
T ss_dssp CCCEEEETTT-TSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred cCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH-c
Confidence 3567776665 466666655544 346688888854311 1246889999999987555444433221 2
Q ss_pred CcccEEEeCCCCC
Q 003302 110 RAFDLVLHDGSPN 122 (832)
Q Consensus 110 ~~FDlVlsDgapn 122 (832)
+.+|+|+++....
T Consensus 102 g~id~li~nAg~~ 114 (269)
T 3gk3_A 102 GKVDVLINNAGIT 114 (269)
T ss_dssp SCCSEEEECCCCC
T ss_pred CCCCEEEECCCcC
Confidence 5679999998643
No 457
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=78.89 E-value=8.4 Score=39.13 Aligned_cols=77 Identities=9% Similarity=0.020 Sum_probs=48.4
Q ss_pred CCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC---C---------CCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA---P---------IRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~---~---------i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
+.+||=.|+ +|+++..++..+ ..+..|++++.++-. . -.++.++.+|+++......+...+... +
T Consensus 4 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~ 81 (260)
T 1x1t_A 4 GKVAVVTGS-TSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ-M 81 (260)
T ss_dssp TCEEEETTC-SSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH-H
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHh-c
Confidence 567776665 466666665543 235689999876522 0 135778899999976554444333221 2
Q ss_pred CcccEEEeCCCC
Q 003302 110 RAFDLVLHDGSP 121 (832)
Q Consensus 110 ~~FDlVlsDgap 121 (832)
+.+|+|+++...
T Consensus 82 g~iD~lv~~Ag~ 93 (260)
T 1x1t_A 82 GRIDILVNNAGI 93 (260)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 567999999764
No 458
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=78.76 E-value=12 Score=37.52 Aligned_cols=79 Identities=6% Similarity=0.060 Sum_probs=50.8
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCC-CCCEEEEEeCCCCCC-----------CCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVP-VGSLVLGLDLVPIAP-----------IRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p-~~~~ViGVDLsp~~~-----------i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
.+.+||=.|+ +|+++..++..+- .+..|++++.++-.. -.++.++.+|+++......+...+.. ..
T Consensus 13 ~~k~vlITGa-sggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~ 90 (265)
T 1h5q_A 13 VNKTIIVTGG-NRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDA-DL 90 (265)
T ss_dssp TTEEEEEETT-TSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH-HS
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHH-hc
Confidence 3567887775 5777766655432 356899998754220 23578899999997655444443322 12
Q ss_pred CcccEEEeCCCCC
Q 003302 110 RAFDLVLHDGSPN 122 (832)
Q Consensus 110 ~~FDlVlsDgapn 122 (832)
+.+|+|++++...
T Consensus 91 ~~id~li~~Ag~~ 103 (265)
T 1h5q_A 91 GPISGLIANAGVS 103 (265)
T ss_dssp CSEEEEEECCCCC
T ss_pred CCCCEEEECCCcC
Confidence 6689999997643
No 459
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=78.73 E-value=2.3 Score=45.41 Aligned_cols=92 Identities=14% Similarity=0.171 Sum_probs=53.2
Q ss_pred CCCCCEEEEEcC--CcCHHHHHHHHhCCCCCEEEEEeCCCC-----C-CCCCceEEEccCCCh-hHHHHHHHHHhhccCC
Q 003302 40 LRSSHAVLDLCA--APGGWMQVAVQRVPVGSLVLGLDLVPI-----A-PIRGAVSLEQDITKP-ECRARVKKVMEEHGVR 110 (832)
Q Consensus 40 l~~g~~VLDLGc--GPGg~sq~La~~~p~~~~ViGVDLsp~-----~-~i~~V~~i~gDIt~~-~~~~~l~~~L~~~~~~ 110 (832)
+++|.+||-.|| |-|..+..++... ++.|++++.++- . .+ ++..+ .|.++. .....+.... . +
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~~~-g~~~~-~d~~~~~~~~~~~~~~~-~---~ 224 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAKMM--GCYVVGSAGSKEKVDLLKTKF-GFDDA-FNYKEESDLTAALKRCF-P---N 224 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTS-CCSEE-EETTSCSCSHHHHHHHC-T---T
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHc-CCceE-EecCCHHHHHHHHHHHh-C---C
Confidence 578999999997 2333444444444 468999998752 1 12 33221 244332 2222333222 1 4
Q ss_pred cccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 111 AFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 111 ~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
.||+|+.... + ..+..+..+|++||++++
T Consensus 225 ~~d~vi~~~g----~--------------~~~~~~~~~l~~~G~~v~ 253 (345)
T 2j3h_A 225 GIDIYFENVG----G--------------KMLDAVLVNMNMHGRIAV 253 (345)
T ss_dssp CEEEEEESSC----H--------------HHHHHHHTTEEEEEEEEE
T ss_pred CCcEEEECCC----H--------------HHHHHHHHHHhcCCEEEE
Confidence 5799997632 1 124567899999999987
No 460
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=78.60 E-value=18 Score=37.53 Aligned_cols=79 Identities=10% Similarity=-0.003 Sum_probs=50.9
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC---------CCCCceEEEccCCChhHHHHHHHHHhhccCCc
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA---------PIRGAVSLEQDITKPECRARVKKVMEEHGVRA 111 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~---------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~ 111 (832)
.|.++|=-|++.|. +..++..+ ..++.|+.++.+.-. .-.++.++++|+++......+...... .+++
T Consensus 6 ~gKvalVTGas~GI-G~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~-~~G~ 83 (258)
T 4gkb_A 6 QDKVVIVTGGASGI-GGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIA-TFGR 83 (258)
T ss_dssp TTCEEEEETTTSHH-HHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHH-HHSC
T ss_pred CCCEEEEeCCCCHH-HHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHH-HhCC
Confidence 47788888877654 43333222 236789999887532 124688999999997655444333322 1277
Q ss_pred ccEEEeCCCCC
Q 003302 112 FDLVLHDGSPN 122 (832)
Q Consensus 112 FDlVlsDgapn 122 (832)
.|+++++....
T Consensus 84 iDiLVNnAGi~ 94 (258)
T 4gkb_A 84 LDGLVNNAGVN 94 (258)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 89999998543
No 461
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=78.45 E-value=6.3 Score=41.55 Aligned_cols=71 Identities=23% Similarity=0.246 Sum_probs=48.8
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCCCC---------------CCceEEEccCCChhHHHHHHHHHh
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIAPI---------------RGAVSLEQDITKPECRARVKKVME 105 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~~i---------------~~V~~i~gDIt~~~~~~~l~~~L~ 105 (832)
.+++||=.| |+|.++.+++..+ ..+..|++++..+.... +++.++.+|+++.... ...+
T Consensus 24 ~~~~vlVtG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~---~~~~- 98 (351)
T 3ruf_A 24 SPKTWLITG-VAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTC---EQVM- 98 (351)
T ss_dssp SCCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHH---HHHT-
T ss_pred CCCeEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHH---HHHh-
Confidence 357888666 5688777776554 23568999998754211 6899999999987543 3333
Q ss_pred hccCCcccEEEeCCCC
Q 003302 106 EHGVRAFDLVLHDGSP 121 (832)
Q Consensus 106 ~~~~~~FDlVlsDgap 121 (832)
..+|+|+|.+++
T Consensus 99 ----~~~d~Vih~A~~ 110 (351)
T 3ruf_A 99 ----KGVDHVLHQAAL 110 (351)
T ss_dssp ----TTCSEEEECCCC
T ss_pred ----cCCCEEEECCcc
Confidence 346999998764
No 462
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=78.37 E-value=9 Score=38.91 Aligned_cols=78 Identities=10% Similarity=0.100 Sum_probs=49.4
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC------C-----CCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA------P-----IRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~------~-----i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
.+.+||=.|++ |+++..++..+ ..+..|++++.++-. . -.++.++.+|+++......+...+... .
T Consensus 6 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~ 83 (263)
T 3ai3_A 6 SGKVAVITGSS-SGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSS-F 83 (263)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHH-H
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence 35678877765 66666555443 235689999887421 0 135788999999976554444333221 2
Q ss_pred CcccEEEeCCCC
Q 003302 110 RAFDLVLHDGSP 121 (832)
Q Consensus 110 ~~FDlVlsDgap 121 (832)
+.+|+|+++...
T Consensus 84 g~id~lv~~Ag~ 95 (263)
T 3ai3_A 84 GGADILVNNAGT 95 (263)
T ss_dssp SSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 567999999854
No 463
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=78.18 E-value=10 Score=39.67 Aligned_cols=74 Identities=12% Similarity=0.078 Sum_probs=49.3
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCC-CCCEEEEEeCCCCCC-----------CCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVP-VGSLVLGLDLVPIAP-----------IRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p-~~~~ViGVDLsp~~~-----------i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
.+++||=.| |+|+++.+++..+- .+..|++++..+-.. -.++.++.+|+++..... ..+..
T Consensus 4 ~~~~vlVTG-atG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~---~~~~~--- 76 (341)
T 3enk_A 4 TKGTILVTG-GAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALA---RIFDA--- 76 (341)
T ss_dssp SSCEEEEET-TTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHH---HHHHH---
T ss_pred CCcEEEEec-CCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHH---HHHhc---
Confidence 346777566 66888777765542 356899998765321 236889999999976443 33332
Q ss_pred CcccEEEeCCCCC
Q 003302 110 RAFDLVLHDGSPN 122 (832)
Q Consensus 110 ~~FDlVlsDgapn 122 (832)
..+|+|+|.++..
T Consensus 77 ~~~d~vih~A~~~ 89 (341)
T 3enk_A 77 HPITAAIHFAALK 89 (341)
T ss_dssp SCCCEEEECCCCC
T ss_pred cCCcEEEECcccc
Confidence 3569999988643
No 464
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=77.94 E-value=2.3 Score=45.55 Aligned_cols=93 Identities=16% Similarity=0.132 Sum_probs=53.1
Q ss_pred CCCEEEEEcCCc-CHHHHHHHHhCCCCC-EEEEEeCCCCC----CCCCceEEEccCCChhHHHHHHHHHhhccCCcccEE
Q 003302 42 SSHAVLDLCAAP-GGWMQVAVQRVPVGS-LVLGLDLVPIA----PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV 115 (832)
Q Consensus 42 ~g~~VLDLGcGP-Gg~sq~La~~~p~~~-~ViGVDLsp~~----~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlV 115 (832)
+|.+||-+|||+ |.++..+++.++ . .|++++.++-. .--++..+ .|..+....+.+.....+ ..||+|
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~G--a~~Vi~~~~~~~~~~~~~~~Ga~~~-~~~~~~~~~~~v~~~~~g---~g~D~v 240 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASG--AYPVIVSEPSDFRRELAKKVGADYV-INPFEEDVVKEVMDITDG---NGVDVF 240 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTT--CCSEEEECSCHHHHHHHHHHTCSEE-ECTTTSCHHHHHHHHTTT---SCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC--CCEEEEECCCHHHHHHHHHhCCCEE-ECCCCcCHHHHHHHHcCC---CCCCEE
Confidence 889999999854 334444555543 4 79999987521 00122211 233333333334433222 357999
Q ss_pred EeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 116 LHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 116 lsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
+.... + ...+..+..+|++||++|+
T Consensus 241 id~~g----~-------------~~~~~~~~~~l~~~G~iv~ 265 (348)
T 2d8a_A 241 LEFSG----A-------------PKALEQGLQAVTPAGRVSL 265 (348)
T ss_dssp EECSC----C-------------HHHHHHHHHHEEEEEEEEE
T ss_pred EECCC----C-------------HHHHHHHHHHHhcCCEEEE
Confidence 97532 1 1234567889999999987
No 465
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=77.91 E-value=16 Score=38.31 Aligned_cols=74 Identities=15% Similarity=0.123 Sum_probs=48.9
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC------CCCCceEEEccCCChhHHHHHHHHHhhccCCcccE
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA------PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDl 114 (832)
.+++||=.| |+|+++.+++..+ ..+..|++++..+-. .++++.++.+|+++.... ...+.. ..+|+
T Consensus 20 ~~~~vlVTG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~---~~~~~~---~~~D~ 92 (333)
T 2q1w_A 20 HMKKVFITG-ICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALV---NQLIGD---LQPDA 92 (333)
T ss_dssp -CCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHH---HHHHHH---HCCSE
T ss_pred CCCEEEEeC-CccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHH---HHHHhc---cCCcE
Confidence 357788777 5678877766544 235689999876421 225788999999997543 333332 23599
Q ss_pred EEeCCCCC
Q 003302 115 VLHDGSPN 122 (832)
Q Consensus 115 VlsDgapn 122 (832)
|++.+++.
T Consensus 93 vih~A~~~ 100 (333)
T 2q1w_A 93 VVHTAASY 100 (333)
T ss_dssp EEECCCCC
T ss_pred EEECceec
Confidence 99998654
No 466
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=77.90 E-value=1.7 Score=46.55 Aligned_cols=94 Identities=16% Similarity=0.122 Sum_probs=55.6
Q ss_pred CCCCCEEEEEcC--CcCHHHHHHHHhCCCCCEEEEEeCCCCC--CC--CCceEEEccCCChhHHHHHHHHHhhccCCccc
Q 003302 40 LRSSHAVLDLCA--APGGWMQVAVQRVPVGSLVLGLDLVPIA--PI--RGAVSLEQDITKPECRARVKKVMEEHGVRAFD 113 (832)
Q Consensus 40 l~~g~~VLDLGc--GPGg~sq~La~~~p~~~~ViGVDLsp~~--~i--~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FD 113 (832)
+++|.+||-+|| |-|..+..++... +..|++++.++-. .. -++..+ .|.++......+...... ..||
T Consensus 164 ~~~g~~vlV~Gasg~iG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~~ga~~~-~d~~~~~~~~~~~~~~~~---~~~d 237 (343)
T 2eih_A 164 VRPGDDVLVMAAGSGVSVAAIQIAKLF--GARVIATAGSEDKLRRAKALGADET-VNYTHPDWPKEVRRLTGG---KGAD 237 (343)
T ss_dssp CCTTCEEEECSTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHTCSEE-EETTSTTHHHHHHHHTTT---TCEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhcCCCEE-EcCCcccHHHHHHHHhCC---CCce
Confidence 568999999998 3444455555554 4589999987521 00 122221 244444333444433322 3579
Q ss_pred EEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 114 LVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 114 lVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
+|+.... +. .+..+..+|++||+||+
T Consensus 238 ~vi~~~g----~~--------------~~~~~~~~l~~~G~~v~ 263 (343)
T 2eih_A 238 KVVDHTG----AL--------------YFEGVIKATANGGRIAI 263 (343)
T ss_dssp EEEESSC----SS--------------SHHHHHHHEEEEEEEEE
T ss_pred EEEECCC----HH--------------HHHHHHHhhccCCEEEE
Confidence 9997643 11 12356789999999987
No 467
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=77.90 E-value=13 Score=37.82 Aligned_cols=79 Identities=10% Similarity=0.037 Sum_probs=50.4
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC---------C--CCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA---------P--IRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~---------~--i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
.+.+||=.|++ ||++..++..+ ..+..|+.++.++-. . ..++.++++|+++......+...+... .
T Consensus 9 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~ 86 (262)
T 3pk0_A 9 QGRSVVVTGGT-KGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEE-F 86 (262)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHH-H
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHH-h
Confidence 35678866655 56666555443 235689999887421 1 146889999999987555444433221 2
Q ss_pred CcccEEEeCCCCC
Q 003302 110 RAFDLVLHDGSPN 122 (832)
Q Consensus 110 ~~FDlVlsDgapn 122 (832)
+.+|+|+++....
T Consensus 87 g~id~lvnnAg~~ 99 (262)
T 3pk0_A 87 GGIDVVCANAGVF 99 (262)
T ss_dssp SCCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 5679999998643
No 468
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=77.87 E-value=13 Score=37.66 Aligned_cols=77 Identities=10% Similarity=0.155 Sum_probs=49.4
Q ss_pred CCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCC---------CC-CCCceEEEccCCChhHHHHHHHHHhhccCCc
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPI---------AP-IRGAVSLEQDITKPECRARVKKVMEEHGVRA 111 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~---------~~-i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~ 111 (832)
+.+||=.|++ ||++..++..+ ..+..|+.++.++- .. -.++.++++|+++......+...+... .+.
T Consensus 6 ~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~ 83 (257)
T 3imf_A 6 EKVVIITGGS-SGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEK-FGR 83 (257)
T ss_dssp TCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHH-HSC
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cCC
Confidence 5677766655 56666555443 23568999988742 11 135888999999987655444433321 256
Q ss_pred ccEEEeCCCC
Q 003302 112 FDLVLHDGSP 121 (832)
Q Consensus 112 FDlVlsDgap 121 (832)
+|+|+++...
T Consensus 84 id~lv~nAg~ 93 (257)
T 3imf_A 84 IDILINNAAG 93 (257)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 7999999763
No 469
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=77.84 E-value=7.7 Score=38.46 Aligned_cols=99 Identities=12% Similarity=0.086 Sum_probs=57.9
Q ss_pred CCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCCCCCCceEEEccCCChhHHHHHHHHHhhccCCcccEEEeCCCC
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSP 121 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsDgap 121 (832)
+.+||=.|++ ||++..++..+ ..+..|+.++.++- +|+++......+...+ +.+|+|+++...
T Consensus 6 ~k~vlVTGas-~gIG~~~a~~l~~~G~~V~~~~r~~~----------~D~~~~~~v~~~~~~~-----g~id~lv~nAg~ 69 (223)
T 3uce_A 6 KTVYVVLGGT-SGIGAELAKQLESEHTIVHVASRQTG----------LDISDEKSVYHYFETI-----GAFDHLIVTAGS 69 (223)
T ss_dssp CEEEEEETTT-SHHHHHHHHHHCSTTEEEEEESGGGT----------CCTTCHHHHHHHHHHH-----CSEEEEEECCCC
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEecCCcc----------cCCCCHHHHHHHHHHh-----CCCCEEEECCCC
Confidence 5667767766 56666666554 34567888876543 6888876554444333 567999999864
Q ss_pred C-CCC-Cc--hhHHhHH---h--HHHHHHHHHHHhhcccCcEEEE
Q 003302 122 N-VGG-AW--AQEAMSQ---N--ALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 122 n-v~g-~w--~~D~~~q---~--~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
. ..+ .+ ..+.+.. . .-....++.+...|+++|.+|.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~ 114 (223)
T 3uce_A 70 YAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITL 114 (223)
T ss_dssp CCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred CCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEE
Confidence 3 111 11 1122211 1 1123445566677788898876
No 470
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=77.82 E-value=3.9 Score=44.36 Aligned_cols=103 Identities=11% Similarity=0.014 Sum_probs=63.3
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEeCCCCC--------C-----------------------CCCceEEEcc
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIA--------P-----------------------IRGAVSLEQD 90 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p~~~~ViGVDLsp~~--------~-----------------------i~~V~~i~gD 90 (832)
+...||.||||.......+....+ +..++-||+-.+. . -.+..++.+|
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~-~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFP-HLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCT-TEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCcEEEEeCCCCccHHHHhcCcCC-CCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 456899999999998888877644 5689999974221 0 1457888999
Q ss_pred CCChhHHHHHHHHHhhccCCcccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 91 ITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 91 It~~~~~~~l~~~L~~~~~~~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
+++......+...+. ......++++-|...+ .... -+...|..+...+ |||.||+
T Consensus 176 L~d~~w~~~ll~~~~--d~~~Ptl~iaEgvL~Y-----L~~~----~~~~ll~~ia~~~-~~~~~v~ 230 (334)
T 1rjd_A 176 LNDITETTRLLDVCT--KREIPTIVISECLLCY-----MHNN----ESQLLINTIMSKF-SHGLWIS 230 (334)
T ss_dssp TTCHHHHHHHHHTTC--CTTSCEEEEEESCGGG-----SCHH----HHHHHHHHHHHHC-SSEEEEE
T ss_pred CCCcHHHHHHHHhcC--CCCCCEEEEEcchhhC-----CCHH----HHHHHHHHHHhhC-CCcEEEE
Confidence 999755444333232 1134478888764321 1111 1234445555555 8888864
No 471
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=77.77 E-value=5.4 Score=41.85 Aligned_cols=79 Identities=13% Similarity=0.068 Sum_probs=49.5
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC------C----CC---CceEEEccCCChhHHHHHHHHHhhc
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA------P----IR---GAVSLEQDITKPECRARVKKVMEEH 107 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~------~----i~---~V~~i~gDIt~~~~~~~l~~~L~~~ 107 (832)
.+.+||=.|+ +||++..++..+ ..+..|++++.++-. . -. ++.++.+|+++......+...+...
T Consensus 25 ~~k~vlVTGa-s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 103 (297)
T 1xhl_A 25 SGKSVIITGS-SNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 103 (297)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence 3567886665 566666555443 236689999887421 0 11 5788999999986554444333221
Q ss_pred cCCcccEEEeCCCCC
Q 003302 108 GVRAFDLVLHDGSPN 122 (832)
Q Consensus 108 ~~~~FDlVlsDgapn 122 (832)
++.+|+|+++....
T Consensus 104 -~g~iD~lvnnAG~~ 117 (297)
T 1xhl_A 104 -FGKIDILVNNAGAN 117 (297)
T ss_dssp -HSCCCEEEECCCCC
T ss_pred -cCCCCEEEECCCcC
Confidence 25679999997643
No 472
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=77.67 E-value=30 Score=36.31 Aligned_cols=72 Identities=13% Similarity=0.040 Sum_probs=48.7
Q ss_pred CEEEEEcCCcCHHHHHHHHhCCC-C-----CEEEEEeCCCCCC---CCCceEEEccCCChhHHHHHHHHHhhccCCcccE
Q 003302 44 HAVLDLCAAPGGWMQVAVQRVPV-G-----SLVLGLDLVPIAP---IRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114 (832)
Q Consensus 44 ~~VLDLGcGPGg~sq~La~~~p~-~-----~~ViGVDLsp~~~---i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDl 114 (832)
++||=.| |+|.++.+++..+-. + ..|++++..+... .+++.++.+|+++... +...+.+. ..+|+
T Consensus 2 ~~vlVtG-atG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~---~~~~~~~~--~~~d~ 75 (364)
T 2v6g_A 2 SVALIVG-VTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPINYVQCDISDPDD---SQAKLSPL--TDVTH 75 (364)
T ss_dssp EEEEEET-TTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSCCCSSCCEEEECCTTSHHH---HHHHHTTC--TTCCE
T ss_pred CEEEEEC-CCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccccccCceEEEEeecCCHHH---HHHHHhcC--CCCCE
Confidence 4566555 568899888877643 3 5899998876432 3578899999998653 33334321 12699
Q ss_pred EEeCCCC
Q 003302 115 VLHDGSP 121 (832)
Q Consensus 115 VlsDgap 121 (832)
|+|.++.
T Consensus 76 vih~a~~ 82 (364)
T 2v6g_A 76 VFYVTWA 82 (364)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9998764
No 473
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=77.62 E-value=9.7 Score=39.28 Aligned_cols=78 Identities=14% Similarity=0.098 Sum_probs=49.2
Q ss_pred CCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC----------CCCCceEEEccCCChhHHHHHHHHHhhccCCc
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA----------PIRGAVSLEQDITKPECRARVKKVMEEHGVRA 111 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~ 111 (832)
+.+||=.|++ ||++..++..+ ..+..|+.++.++-. .-..+.++.+|+++......+...+... .+.
T Consensus 4 ~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g~ 81 (264)
T 3tfo_A 4 DKVILITGAS-GGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDT-WGR 81 (264)
T ss_dssp TCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-HSC
T ss_pred CCEEEEeCCc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-cCC
Confidence 4677767765 55665555443 236789999887421 1134778899999987555444433221 256
Q ss_pred ccEEEeCCCCC
Q 003302 112 FDLVLHDGSPN 122 (832)
Q Consensus 112 FDlVlsDgapn 122 (832)
+|+|+++....
T Consensus 82 iD~lVnnAG~~ 92 (264)
T 3tfo_A 82 IDVLVNNAGVM 92 (264)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 79999998643
No 474
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=77.58 E-value=3.6 Score=44.10 Aligned_cols=91 Identities=23% Similarity=0.267 Sum_probs=54.4
Q ss_pred CCCCCEEEEEcC-C-cCHHHHHHHHhCCCCCEEEEEeCCCCC-----CCCCce-EEEccCCChhHHHHHHHHHhhccCCc
Q 003302 40 LRSSHAVLDLCA-A-PGGWMQVAVQRVPVGSLVLGLDLVPIA-----PIRGAV-SLEQDITKPECRARVKKVMEEHGVRA 111 (832)
Q Consensus 40 l~~g~~VLDLGc-G-PGg~sq~La~~~p~~~~ViGVDLsp~~-----~i~~V~-~i~gDIt~~~~~~~l~~~L~~~~~~~ 111 (832)
+++|.+||=+|| | -|..+..+++.+ ++.|++++.++-. .+ ++. ++..+ ....+.+.....+ ..
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~-ga~~v~~~~---~~~~~~v~~~~~~---~g 227 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGM--GAKVIAVVNRTAATEFVKSV-GADIVLPLE---EGWAKAVREATGG---AG 227 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHH-TCSEEEESS---TTHHHHHHHHTTT---SC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhc-CCcEEecCc---hhHHHHHHHHhCC---CC
Confidence 578999998887 3 344555556665 4589999987632 11 222 22222 2333444443332 35
Q ss_pred ccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEE
Q 003302 112 FDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 112 FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~ 157 (832)
||+|+.... +. .+..+..+|++||++|+
T Consensus 228 ~Dvvid~~g----~~--------------~~~~~~~~l~~~G~iv~ 255 (342)
T 4eye_A 228 VDMVVDPIG----GP--------------AFDDAVRTLASEGRLLV 255 (342)
T ss_dssp EEEEEESCC--------------------CHHHHHHTEEEEEEEEE
T ss_pred ceEEEECCc----hh--------------HHHHHHHhhcCCCEEEE
Confidence 799997532 11 13357789999999997
No 475
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=77.53 E-value=9.9 Score=39.04 Aligned_cols=80 Identities=9% Similarity=0.017 Sum_probs=50.9
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC----------CCCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA----------PIRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
.+.+||=.|++ ||++..++..+ ..+..|++++.++-. .-.++.++++|+++......+...+.....+
T Consensus 20 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g 98 (273)
T 1ae1_A 20 KGTTALVTGGS-KGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG 98 (273)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred CCCEEEEECCc-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 46788878864 66666555443 235689999887421 1235788999999987655444433321115
Q ss_pred cccEEEeCCCCC
Q 003302 111 AFDLVLHDGSPN 122 (832)
Q Consensus 111 ~FDlVlsDgapn 122 (832)
.+|+|+++....
T Consensus 99 ~id~lv~nAg~~ 110 (273)
T 1ae1_A 99 KLNILVNNAGVV 110 (273)
T ss_dssp CCCEEEECCCCC
T ss_pred CCcEEEECCCCC
Confidence 679999998643
No 476
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=77.45 E-value=11 Score=37.97 Aligned_cols=78 Identities=15% Similarity=0.116 Sum_probs=49.9
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC----------CCCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA----------PIRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
.+.+||=.|++ |+++..++..+ ..+..|++++.++.. .-.++.++.+|+++......+...+... .+
T Consensus 12 ~~k~vlItGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 89 (260)
T 3awd_A 12 DNRVAIVTGGA-QNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQ-EG 89 (260)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH-cC
Confidence 35678877754 66776665543 235689999887421 1235888999999976554443333221 15
Q ss_pred cccEEEeCCCC
Q 003302 111 AFDLVLHDGSP 121 (832)
Q Consensus 111 ~FDlVlsDgap 121 (832)
.+|+|+++...
T Consensus 90 ~id~vi~~Ag~ 100 (260)
T 3awd_A 90 RVDILVACAGI 100 (260)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 67999999764
No 477
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=77.45 E-value=21 Score=35.97 Aligned_cols=79 Identities=9% Similarity=0.044 Sum_probs=51.3
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCC-CC---CEEEEEeCCCCCC---------CCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVP-VG---SLVLGLDLVPIAP---------IRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p-~~---~~ViGVDLsp~~~---------i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
.+.+||=.|+ +|+++..++..+- .+ ..|++++.++... ..++.++.+|+++......+...+...
T Consensus 20 ~~k~vlITGa-sggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~- 97 (267)
T 1sny_A 20 HMNSILITGC-NRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGV- 97 (267)
T ss_dssp CCSEEEESCC-SSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHH-
T ss_pred CCCEEEEECC-CCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHh-
Confidence 3567886665 5777777766543 24 6899998876321 236889999999986555444433221
Q ss_pred CC--cccEEEeCCCCC
Q 003302 109 VR--AFDLVLHDGSPN 122 (832)
Q Consensus 109 ~~--~FDlVlsDgapn 122 (832)
.+ .+|+|++++...
T Consensus 98 ~g~~~id~li~~Ag~~ 113 (267)
T 1sny_A 98 TKDQGLNVLFNNAGIA 113 (267)
T ss_dssp HGGGCCSEEEECCCCC
T ss_pred cCCCCccEEEECCCcC
Confidence 12 579999998643
No 478
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=77.29 E-value=14 Score=38.04 Aligned_cols=78 Identities=17% Similarity=0.091 Sum_probs=48.3
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhCC-CCCEEEEEeCCC-CC-----------CCCCceEEEccCCC----hhHHHHHHHHH
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRVP-VGSLVLGLDLVP-IA-----------PIRGAVSLEQDITK----PECRARVKKVM 104 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~p-~~~~ViGVDLsp-~~-----------~i~~V~~i~gDIt~----~~~~~~l~~~L 104 (832)
.+.+||=.|++ ||++..++..+- .+..|+.++.++ -. .-..+.++.+|+++ ......+...+
T Consensus 22 ~~k~~lVTGas-~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 100 (288)
T 2x9g_A 22 EAPAAVVTGAA-KRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSC 100 (288)
T ss_dssp CCCEEEETTCS-SHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHH
Confidence 35678867765 566655554331 256899998876 11 11357889999999 65444443333
Q ss_pred hhccCCcccEEEeCCCC
Q 003302 105 EEHGVRAFDLVLHDGSP 121 (832)
Q Consensus 105 ~~~~~~~FDlVlsDgap 121 (832)
... .+.+|+|+++...
T Consensus 101 ~~~-~g~iD~lvnnAG~ 116 (288)
T 2x9g_A 101 FRA-FGRCDVLVNNASA 116 (288)
T ss_dssp HHH-HSCCCEEEECCCC
T ss_pred HHh-cCCCCEEEECCCC
Confidence 221 2567999999854
No 479
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=77.21 E-value=19 Score=36.27 Aligned_cols=78 Identities=13% Similarity=0.055 Sum_probs=48.9
Q ss_pred CCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC-------C-CCCceEEEccCCChhHHHHHHHHHhhccCCccc
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA-------P-IRGAVSLEQDITKPECRARVKKVMEEHGVRAFD 113 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~-------~-i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FD 113 (832)
+.+||=.|+ +|+++..++..+ ..+..|++++.++-. . -.++.++.+|+++......+...+... .+.+|
T Consensus 4 ~k~vlVTGa-s~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~g~id 81 (255)
T 2q2v_A 4 GKTALVTGS-TSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAERE-FGGVD 81 (255)
T ss_dssp TCEEEESSC-SSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHH-HSSCS
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHH-cCCCC
Confidence 567775665 467776665543 235689998876531 1 135778899999976554444333221 25679
Q ss_pred EEEeCCCCC
Q 003302 114 LVLHDGSPN 122 (832)
Q Consensus 114 lVlsDgapn 122 (832)
+|+++....
T Consensus 82 ~lv~~Ag~~ 90 (255)
T 2q2v_A 82 ILVNNAGIQ 90 (255)
T ss_dssp EEEECCCCC
T ss_pred EEEECCCCC
Confidence 999997643
No 480
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=77.08 E-value=12 Score=39.17 Aligned_cols=79 Identities=16% Similarity=0.177 Sum_probs=50.5
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC---------CC--CCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA---------PI--RGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~---------~i--~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
.+.+||=.|++ ||++..++..+ ..+..|+.++.++-. .. ..+.++++|+++......+...+... +
T Consensus 40 ~~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~ 117 (293)
T 3rih_A 40 SARSVLVTGGT-KGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDA-F 117 (293)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHH-c
Confidence 46778866655 56665555433 236689999887521 11 46888999999986554444433221 2
Q ss_pred CcccEEEeCCCCC
Q 003302 110 RAFDLVLHDGSPN 122 (832)
Q Consensus 110 ~~FDlVlsDgapn 122 (832)
+.+|+|+++....
T Consensus 118 g~iD~lvnnAg~~ 130 (293)
T 3rih_A 118 GALDVVCANAGIF 130 (293)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 6779999998643
No 481
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=77.07 E-value=7.7 Score=39.99 Aligned_cols=78 Identities=15% Similarity=0.101 Sum_probs=49.6
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC---------CC----CCceEEEccCCChhHHHHHHHHHhhc
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA---------PI----RGAVSLEQDITKPECRARVKKVMEEH 107 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~---------~i----~~V~~i~gDIt~~~~~~~l~~~L~~~ 107 (832)
.+.+||=.|++ ||++..++..+ ..+..|+.++.++-. .. ..+.++++|+++......+...+...
T Consensus 10 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (281)
T 3svt_A 10 QDRTYLVTGGG-SGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW 88 (281)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 36788878865 55555554433 236789999887421 11 15788999999986554444433221
Q ss_pred cCCcccEEEeCCCC
Q 003302 108 GVRAFDLVLHDGSP 121 (832)
Q Consensus 108 ~~~~FDlVlsDgap 121 (832)
.+.+|+|+++...
T Consensus 89 -~g~id~lv~nAg~ 101 (281)
T 3svt_A 89 -HGRLHGVVHCAGG 101 (281)
T ss_dssp -HSCCCEEEECCCC
T ss_pred -cCCCCEEEECCCc
Confidence 2577999999864
No 482
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=76.98 E-value=8.1 Score=40.62 Aligned_cols=114 Identities=18% Similarity=0.130 Sum_probs=68.2
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC------CC-CCceEEEccCCChhHHHHHHHHHhhccCCccc
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA------PI-RGAVSLEQDITKPECRARVKKVMEEHGVRAFD 113 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~------~i-~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FD 113 (832)
.|.++|=-|++.| ++..++..+ ..++.|+.+|.+.-. .+ .++.++++|+++....+.+...+... +++.|
T Consensus 28 ~gKvalVTGas~G-IG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~-~G~iD 105 (273)
T 4fgs_A 28 NAKIAVITGATSG-IGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAE-AGRID 105 (273)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHH-HSCEE
T ss_pred CCCEEEEeCcCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHH-cCCCC
Confidence 4788888887665 444443332 346799999987521 12 35788999999987665554444322 37789
Q ss_pred EEEeCCCCCCCCC-c--hhHHhHH---hH--HHHHHHHHHHhhcccCcEEEE
Q 003302 114 LVLHDGSPNVGGA-W--AQEAMSQ---NA--LVIDSVKLATQFLAPKGTFVT 157 (832)
Q Consensus 114 lVlsDgapnv~g~-w--~~D~~~q---~~--L~~~aLk~A~~~LkpGG~fV~ 157 (832)
++++|......+. + ..+.+.. .. -+....+.+...|+.+|.+|.
T Consensus 106 iLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IIn 157 (273)
T 4fgs_A 106 VLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVL 157 (273)
T ss_dssp EEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEE
T ss_pred EEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEE
Confidence 9999975332211 1 1222221 11 123445667778888888776
No 483
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=76.97 E-value=8.2 Score=39.83 Aligned_cols=79 Identities=8% Similarity=0.098 Sum_probs=49.7
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC----------CCCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA----------PIRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
.+.+||=.|+ +||++..++..+ ..+..|++++.++-. .-..+.++.+|+++......+...+... ++
T Consensus 27 ~~k~~lVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g 104 (270)
T 3ftp_A 27 DKQVAIVTGA-SRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKE-FG 104 (270)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHH-cC
Confidence 3567886665 456665555433 236689999887421 1135788999999986555444433221 25
Q ss_pred cccEEEeCCCCC
Q 003302 111 AFDLVLHDGSPN 122 (832)
Q Consensus 111 ~FDlVlsDgapn 122 (832)
.+|+|+++....
T Consensus 105 ~iD~lvnnAg~~ 116 (270)
T 3ftp_A 105 ALNVLVNNAGIT 116 (270)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 679999998643
No 484
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=76.95 E-value=8.1 Score=39.43 Aligned_cols=78 Identities=13% Similarity=0.131 Sum_probs=49.6
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC------------CCCCceEEEccCCChhHHHHHHHHHhhcc
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA------------PIRGAVSLEQDITKPECRARVKKVMEEHG 108 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~------------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~ 108 (832)
.+.+||=.|++ ||++..++..+ ..+..|+.++.++-. +-.++.++.+|+++......+...+...
T Consensus 12 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~- 89 (267)
T 1iy8_A 12 TDRVVLITGGG-SGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER- 89 (267)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH-
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHH-
Confidence 35788878865 66666555443 235689999887421 0235788999999976554444333221
Q ss_pred CCcccEEEeCCCC
Q 003302 109 VRAFDLVLHDGSP 121 (832)
Q Consensus 109 ~~~FDlVlsDgap 121 (832)
.+.+|+|+++...
T Consensus 90 ~g~id~lv~nAg~ 102 (267)
T 1iy8_A 90 FGRIDGFFNNAGI 102 (267)
T ss_dssp HSCCSEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 2567999999754
No 485
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=76.88 E-value=9.5 Score=39.62 Aligned_cols=78 Identities=17% Similarity=0.114 Sum_probs=49.8
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC----------CCCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA----------PIRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
.+.+||=.|++ ||++..++..+ ..+..|+.++.+.-. .-..+.++++|+++......+...+... .+
T Consensus 27 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g 104 (283)
T 3v8b_A 27 PSPVALITGAG-SGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLK-FG 104 (283)
T ss_dssp CCCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-hC
Confidence 46788878866 45555554433 236789999887411 1235788999999986554444433221 26
Q ss_pred cccEEEeCCCC
Q 003302 111 AFDLVLHDGSP 121 (832)
Q Consensus 111 ~FDlVlsDgap 121 (832)
.+|+|+++...
T Consensus 105 ~iD~lVnnAg~ 115 (283)
T 3v8b_A 105 HLDIVVANAGI 115 (283)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 77999999764
No 486
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=76.72 E-value=3.7 Score=43.83 Aligned_cols=70 Identities=21% Similarity=0.115 Sum_probs=47.7
Q ss_pred CCEEEEEcCCcCHHHHHHHHhCCC--CCEEEEEeCCCCC-----CCCCceEEEccCC-ChhHHHHHHHHHhhccCCcccE
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRVPV--GSLVLGLDLVPIA-----PIRGAVSLEQDIT-KPECRARVKKVMEEHGVRAFDL 114 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~p~--~~~ViGVDLsp~~-----~i~~V~~i~gDIt-~~~~~~~l~~~L~~~~~~~FDl 114 (832)
+++||=.| |+|.++.+++..+-. +..|++++.++-. ..+++.++.+|++ +..... ..+. .+|+
T Consensus 24 ~~~vlVtG-atG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~---~~~~-----~~d~ 94 (372)
T 3slg_A 24 AKKVLILG-VNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVE---YHVK-----KCDV 94 (372)
T ss_dssp CCEEEEES-CSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHH---HHHH-----HCSE
T ss_pred CCEEEEEC-CCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHH---HHhc-----cCCE
Confidence 46788555 678888777665521 4689999987632 1368999999999 765432 2332 3499
Q ss_pred EEeCCCC
Q 003302 115 VLHDGSP 121 (832)
Q Consensus 115 VlsDgap 121 (832)
|+|.++.
T Consensus 95 Vih~A~~ 101 (372)
T 3slg_A 95 ILPLVAI 101 (372)
T ss_dssp EEECBCC
T ss_pred EEEcCcc
Confidence 9998754
No 487
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=76.69 E-value=17 Score=37.54 Aligned_cols=78 Identities=15% Similarity=0.133 Sum_probs=50.3
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC---------CCCCceEEEccCCChhHHHHHHHHHhhccCCc
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA---------PIRGAVSLEQDITKPECRARVKKVMEEHGVRA 111 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~---------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~ 111 (832)
.+.+||=.|++ ||++..++..+ ..+..|+.++..+-. .-..+.++++|+++......+...+... +.
T Consensus 30 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~--g~ 106 (273)
T 3uf0_A 30 AGRTAVVTGAG-SGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAAT--RR 106 (273)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHH--SC
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhc--CC
Confidence 46788878876 55555554433 236689999854310 1235788999999987665554444332 56
Q ss_pred ccEEEeCCCCC
Q 003302 112 FDLVLHDGSPN 122 (832)
Q Consensus 112 FDlVlsDgapn 122 (832)
+|+|+++....
T Consensus 107 iD~lv~nAg~~ 117 (273)
T 3uf0_A 107 VDVLVNNAGII 117 (273)
T ss_dssp CCEEEECCCCC
T ss_pred CcEEEECCCCC
Confidence 79999997543
No 488
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=76.68 E-value=3 Score=44.88 Aligned_cols=86 Identities=17% Similarity=0.116 Sum_probs=50.9
Q ss_pred CEEEEEcCCcCHHHHHH----H-HhCCCCCE-EEEEeCCCC---C-C---CCCceEEEccCCChhHHHHHHHHHhhccCC
Q 003302 44 HAVLDLCAAPGGWMQVA----V-QRVPVGSL-VLGLDLVPI---A-P---IRGAVSLEQDITKPECRARVKKVMEEHGVR 110 (832)
Q Consensus 44 ~~VLDLGcGPGg~sq~L----a-~~~p~~~~-ViGVDLsp~---~-~---i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~ 110 (832)
.+||=+|| |+.++.+ + +.+ +.. |++++.++- . . --++..+ |..+....+ +... . +
T Consensus 174 ~~VlV~Ga--G~vG~~a~iqla~k~~--Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v--~~~~~~~~~-i~~~-~----g 241 (357)
T 2b5w_A 174 SSAFVLGN--GSLGLLTLAMLKVDDK--GYENLYCLGRRDRPDPTIDIIEELDATYV--DSRQTPVED-VPDV-Y----E 241 (357)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHCTT--CCCEEEEEECCCSSCHHHHHHHHTTCEEE--ETTTSCGGG-HHHH-S----C
T ss_pred CEEEEECC--CHHHHHHHHHHHHHHc--CCcEEEEEeCCcccHHHHHHHHHcCCccc--CCCccCHHH-HHHh-C----C
Confidence 89999998 4544444 3 333 344 999998765 2 1 1245444 444333222 3332 2 3
Q ss_pred cccEEEeCCCCCCCCCchhHHhHHhHHHHHHHHHHHhhcccCcEEEEE
Q 003302 111 AFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTK 158 (832)
Q Consensus 111 ~FDlVlsDgapnv~g~w~~D~~~q~~L~~~aLk~A~~~LkpGG~fV~K 158 (832)
.||+|+-.. ++ . ..+..+.++|++||++|+.
T Consensus 242 g~Dvvid~~----g~---~----------~~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 242 QMDFIYEAT----GF---P----------KHAIQSVQALAPNGVGALL 272 (357)
T ss_dssp CEEEEEECS----CC---H----------HHHHHHHHHEEEEEEEEEC
T ss_pred CCCEEEECC----CC---h----------HHHHHHHHHHhcCCEEEEE
Confidence 679998642 11 0 1345678999999999873
No 489
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=76.66 E-value=8.3 Score=40.22 Aligned_cols=74 Identities=11% Similarity=-0.038 Sum_probs=47.8
Q ss_pred CCCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC----------CCCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 41 RSSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA----------PIRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 41 ~~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
+++++||=.| |+|+++.+++..+ ..+..|++++..+.. ..+++.++.+|+++.... ...+...
T Consensus 12 ~~~~~vlVTG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~---~~~~~~~-- 85 (335)
T 1rpn_A 12 SMTRSALVTG-ITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSV---QRAVIKA-- 85 (335)
T ss_dssp ---CEEEEET-TTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHH---HHHHHHH--
T ss_pred ccCCeEEEEC-CCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHH---HHHHHHc--
Confidence 4678898676 5688887776544 235689999887532 124688999999986543 3333321
Q ss_pred CcccEEEeCCCC
Q 003302 110 RAFDLVLHDGSP 121 (832)
Q Consensus 110 ~~FDlVlsDgap 121 (832)
.+|+|+|.+++
T Consensus 86 -~~d~Vih~A~~ 96 (335)
T 1rpn_A 86 -QPQEVYNLAAQ 96 (335)
T ss_dssp -CCSEEEECCSC
T ss_pred -CCCEEEECccc
Confidence 35999998764
No 490
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=76.57 E-value=7.3 Score=38.79 Aligned_cols=75 Identities=17% Similarity=0.192 Sum_probs=48.9
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC------CCCCceEEEccCCChhHHHHHHHHHhhccCCcccE
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA------PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDL 114 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDl 114 (832)
.+++||=.|+ +|+++..++..+ ..+..|++++.++-. .++++.++.+|+++..... ..+. ..+.+|+
T Consensus 6 ~~~~vlVTGa-sggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~---~~~~--~~~~id~ 79 (244)
T 1cyd_A 6 SGLRALVTGA-GKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATE---KALG--GIGPVDL 79 (244)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHH---HHHT--TCCCCSE
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHH---HHHH--HcCCCCE
Confidence 4567887775 567776665543 235689999887421 1356788899999976433 3333 2256799
Q ss_pred EEeCCCCC
Q 003302 115 VLHDGSPN 122 (832)
Q Consensus 115 VlsDgapn 122 (832)
|++++...
T Consensus 80 vi~~Ag~~ 87 (244)
T 1cyd_A 80 LVNNAALV 87 (244)
T ss_dssp EEECCCCC
T ss_pred EEECCccc
Confidence 99998643
No 491
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=76.50 E-value=16 Score=36.88 Aligned_cols=77 Identities=22% Similarity=0.222 Sum_probs=48.3
Q ss_pred CCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC------CCCCceEEEccCCChhHHHHHHHHHhhccCCcccEE
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA------PIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLV 115 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlV 115 (832)
+.+||=.|++ ||++..++..+ ..+..|++++.++-. .+ ++.++.+|+++......+...+... .+.+|+|
T Consensus 5 ~k~vlVTGas-~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~-~g~id~l 81 (245)
T 1uls_A 5 DKAVLITGAA-HGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-GAHPVVMDVADPASVERGFAEALAH-LGRLDGV 81 (245)
T ss_dssp TCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-TCEEEECCTTCHHHHHHHHHHHHHH-HSSCCEE
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-CCEEEEecCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence 5678877764 56665555443 235689999876411 12 4788999999976554443332211 2567999
Q ss_pred EeCCCCC
Q 003302 116 LHDGSPN 122 (832)
Q Consensus 116 lsDgapn 122 (832)
+++....
T Consensus 82 vn~Ag~~ 88 (245)
T 1uls_A 82 VHYAGIT 88 (245)
T ss_dssp EECCCCC
T ss_pred EECCCCC
Confidence 9997643
No 492
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=76.45 E-value=13 Score=37.45 Aligned_cols=78 Identities=13% Similarity=0.061 Sum_probs=49.5
Q ss_pred CCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC----------CCCCceEEEccCCChhHHHHHHHHHhhccCCc
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA----------PIRGAVSLEQDITKPECRARVKKVMEEHGVRA 111 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~ 111 (832)
+.++|=.|++ ||++..++..+ ..+..|+.++.++-. .-.++.++++|+++......+...+... .+.
T Consensus 7 ~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-~g~ 84 (247)
T 2jah_A 7 GKVALITGAS-SGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEA-LGG 84 (247)
T ss_dssp TCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-HSC
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH-cCC
Confidence 5678878865 66666555443 235689999876411 0135788999999976554444333221 256
Q ss_pred ccEEEeCCCCC
Q 003302 112 FDLVLHDGSPN 122 (832)
Q Consensus 112 FDlVlsDgapn 122 (832)
+|+|+++....
T Consensus 85 id~lv~nAg~~ 95 (247)
T 2jah_A 85 LDILVNNAGIM 95 (247)
T ss_dssp CSEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 79999997543
No 493
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=76.40 E-value=11 Score=38.91 Aligned_cols=78 Identities=6% Similarity=-0.011 Sum_probs=48.8
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
.+.+||=.|++. |++..++..+ ..+..|+.++..... .-.++.++++|+++......+...+... .
T Consensus 28 ~~k~~lVTGas~-GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~ 105 (280)
T 4da9_A 28 ARPVAIVTGGRR-GIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAE-F 105 (280)
T ss_dssp CCCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHH-H
T ss_pred CCCEEEEecCCC-HHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH-c
Confidence 367788777654 5555544433 236689999864311 1246889999999987655444433221 2
Q ss_pred CcccEEEeCCCC
Q 003302 110 RAFDLVLHDGSP 121 (832)
Q Consensus 110 ~~FDlVlsDgap 121 (832)
+.+|+|+++...
T Consensus 106 g~iD~lvnnAg~ 117 (280)
T 4da9_A 106 GRIDCLVNNAGI 117 (280)
T ss_dssp SCCCEEEEECC-
T ss_pred CCCCEEEECCCc
Confidence 567999999754
No 494
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=76.25 E-value=9.1 Score=39.70 Aligned_cols=79 Identities=15% Similarity=0.108 Sum_probs=49.1
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC------C-----CCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA------P-----IRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~------~-----i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
.+.+||=.|++ ||++..++..+ ..+..|+.++.++-. . -..+.++++|+++......+...+... +
T Consensus 32 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~ 109 (281)
T 4dry_A 32 EGRIALVTGGG-TGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAE-F 109 (281)
T ss_dssp --CEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence 46778866655 66666665543 236789999887521 0 112488999999987555444433221 2
Q ss_pred CcccEEEeCCCCC
Q 003302 110 RAFDLVLHDGSPN 122 (832)
Q Consensus 110 ~~FDlVlsDgapn 122 (832)
+.+|+|+++....
T Consensus 110 g~iD~lvnnAG~~ 122 (281)
T 4dry_A 110 ARLDLLVNNAGSN 122 (281)
T ss_dssp SCCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 6779999998643
No 495
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=76.25 E-value=9 Score=39.52 Aligned_cols=75 Identities=9% Similarity=0.059 Sum_probs=47.5
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC-----------CCCCceEEEccCCChhHHHHHHHHHhhccC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA-----------PIRGAVSLEQDITKPECRARVKKVMEEHGV 109 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~-----------~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~ 109 (832)
.+.+||=.|+ +||++..++..+ ..+..|++++.++-. ...++.++.+|+++......+...+... .
T Consensus 27 ~~k~vlITGa-sggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~-~ 104 (286)
T 1xu9_A 27 QGKKVIVTGA-SKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL-M 104 (286)
T ss_dssp TTCEEEESSC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHH-c
Confidence 3678886775 466766655433 235689999887421 1125788999999976554444333221 2
Q ss_pred CcccEEEeC
Q 003302 110 RAFDLVLHD 118 (832)
Q Consensus 110 ~~FDlVlsD 118 (832)
+.+|+|+++
T Consensus 105 g~iD~li~n 113 (286)
T 1xu9_A 105 GGLDMLILN 113 (286)
T ss_dssp TSCSEEEEC
T ss_pred CCCCEEEEC
Confidence 567999998
No 496
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=76.23 E-value=23 Score=36.79 Aligned_cols=72 Identities=14% Similarity=-0.018 Sum_probs=47.4
Q ss_pred CCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCCC----------CCCceEEEccCCChhHHHHHHHHHhhccCCc
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIAP----------IRGAVSLEQDITKPECRARVKKVMEEHGVRA 111 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~~----------i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~ 111 (832)
+++||=.| |+|+++.+++..+ ..+..|++++.++-.. .+++.++.+|+++..... ..+... .
T Consensus 3 ~~~vlVtG-atG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~---~~~~~~---~ 75 (345)
T 2z1m_A 3 GKRALITG-IRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNII---RTIEKV---Q 75 (345)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHH---HHHHHH---C
T ss_pred CCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHH---HHHHhc---C
Confidence 46788666 4678877776544 2356899998875321 136888999999865433 333321 3
Q ss_pred ccEEEeCCCC
Q 003302 112 FDLVLHDGSP 121 (832)
Q Consensus 112 FDlVlsDgap 121 (832)
+|+|+|.+++
T Consensus 76 ~d~vih~A~~ 85 (345)
T 2z1m_A 76 PDEVYNLAAQ 85 (345)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 5999999864
No 497
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=76.19 E-value=20 Score=36.08 Aligned_cols=77 Identities=22% Similarity=0.212 Sum_probs=47.5
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCCCCCCceEEEccCCChhHHHHHHHHHhhccCCcccEEEeCCC
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS 120 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~~i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FDlVlsDga 120 (832)
.+.+||=.|+ +|+++..++..+ ..+..|++++.++-. ...+..+.+|+++......+...+... .+.+|+|+++..
T Consensus 14 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~id~lv~~Ag 90 (247)
T 1uzm_A 14 VSRSVLVTGG-NRGIGLAIAQRLAADGHKVAVTHRGSGA-PKGLFGVEVDVTDSDAVDRAFTAVEEH-QGPVEVLVSNAG 90 (247)
T ss_dssp CCCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSSCC-CTTSEEEECCTTCHHHHHHHHHHHHHH-HSSCSEEEEECS
T ss_pred CCCEEEEeCC-CCHHHHHHHHHHHHCCCEEEEEeCChHH-HHHhcCeeccCCCHHHHHHHHHHHHHH-cCCCCEEEECCC
Confidence 3567886664 567776665543 235689999876532 223335889999976554444333221 256799999975
Q ss_pred C
Q 003302 121 P 121 (832)
Q Consensus 121 p 121 (832)
.
T Consensus 91 ~ 91 (247)
T 1uzm_A 91 L 91 (247)
T ss_dssp C
T ss_pred C
Confidence 4
No 498
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=76.12 E-value=7.6 Score=39.99 Aligned_cols=79 Identities=11% Similarity=0.158 Sum_probs=50.3
Q ss_pred CCCEEEEEcCCcCHHHHHHHHhC-CCCCEEEEEeCCCCC------C-CCCceEEEccCCChhHHHHHHHHHhhccCCccc
Q 003302 42 SSHAVLDLCAAPGGWMQVAVQRV-PVGSLVLGLDLVPIA------P-IRGAVSLEQDITKPECRARVKKVMEEHGVRAFD 113 (832)
Q Consensus 42 ~g~~VLDLGcGPGg~sq~La~~~-p~~~~ViGVDLsp~~------~-i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~FD 113 (832)
.+.+||=.|++ ||++..++..+ ..+..|+.++.++-. . -..+.++++|+++......+...+... .+.+|
T Consensus 26 ~gk~vlVTGas-~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g~iD 103 (266)
T 3grp_A 26 TGRKALVTGAT-GGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAERE-MEGID 103 (266)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHH-HTSCC
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHH-cCCCC
Confidence 46778867765 55665555443 235688888876421 1 135888999999987655554433321 25679
Q ss_pred EEEeCCCCC
Q 003302 114 LVLHDGSPN 122 (832)
Q Consensus 114 lVlsDgapn 122 (832)
+|+++....
T Consensus 104 ~lvnnAg~~ 112 (266)
T 3grp_A 104 ILVNNAGIT 112 (266)
T ss_dssp EEEECCCCC
T ss_pred EEEECCCCC
Confidence 999998643
No 499
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=76.06 E-value=6.9 Score=41.35 Aligned_cols=70 Identities=16% Similarity=0.115 Sum_probs=44.3
Q ss_pred EEEEEcCCcCHHHHHHHHhCCC--CCEEEEEeCCCC-------CC---CCCceEEEccCCChhHHHHHHHHHhhccCCcc
Q 003302 45 AVLDLCAAPGGWMQVAVQRVPV--GSLVLGLDLVPI-------AP---IRGAVSLEQDITKPECRARVKKVMEEHGVRAF 112 (832)
Q Consensus 45 ~VLDLGcGPGg~sq~La~~~p~--~~~ViGVDLsp~-------~~---i~~V~~i~gDIt~~~~~~~l~~~L~~~~~~~F 112 (832)
+||=.| |+|+++.+++..+-. +..|++++..+. .. .+++.++.+|+++..... ..+.. ..+
T Consensus 2 kvlVTG-asG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~---~~~~~---~~~ 74 (361)
T 1kew_A 2 KILITG-GAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEIT---RIFEQ---YQP 74 (361)
T ss_dssp EEEEES-TTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHH---HHHHH---HCC
T ss_pred EEEEEC-CCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHH---HHHhh---cCC
Confidence 456555 457777776655422 458999987541 11 246889999999975433 33332 245
Q ss_pred cEEEeCCCC
Q 003302 113 DLVLHDGSP 121 (832)
Q Consensus 113 DlVlsDgap 121 (832)
|+|+|.+++
T Consensus 75 d~vih~A~~ 83 (361)
T 1kew_A 75 DAVMHLAAE 83 (361)
T ss_dssp SEEEECCSC
T ss_pred CEEEECCCC
Confidence 999998764
No 500
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=76.04 E-value=5.1 Score=43.96 Aligned_cols=73 Identities=16% Similarity=0.115 Sum_probs=48.9
Q ss_pred CCEEEEEcCCcCHHHHHHHHhCCC-C-CEEEEEeCCCCC------------C--CCCceEEEccCCChhHHHHHHHHHhh
Q 003302 43 SHAVLDLCAAPGGWMQVAVQRVPV-G-SLVLGLDLVPIA------------P--IRGAVSLEQDITKPECRARVKKVMEE 106 (832)
Q Consensus 43 g~~VLDLGcGPGg~sq~La~~~p~-~-~~ViGVDLsp~~------------~--i~~V~~i~gDIt~~~~~~~l~~~L~~ 106 (832)
+++||=.|+ +|+++.+++..+-. + ..|++++.++.. + ..++.++.+|+++...... .+..
T Consensus 35 ~k~vLVTGa-tG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~---~~~~ 110 (399)
T 3nzo_A 35 QSRFLVLGG-AGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAF---IKAD 110 (399)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHH---HHHC
T ss_pred CCEEEEEcC-ChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHH---HHHh
Confidence 678886664 58888777665532 3 589999987521 0 1468899999999764332 2222
Q ss_pred ccCCcccEEEeCCCCC
Q 003302 107 HGVRAFDLVLHDGSPN 122 (832)
Q Consensus 107 ~~~~~FDlVlsDgapn 122 (832)
..+|+|+|.++..
T Consensus 111 ---~~~D~Vih~Aa~~ 123 (399)
T 3nzo_A 111 ---GQYDYVLNLSALK 123 (399)
T ss_dssp ---CCCSEEEECCCCC
T ss_pred ---CCCCEEEECCCcC
Confidence 4569999987643
Done!