BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003311
(832 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3MWY|W Chain W, Crystal Structure Of The Chromodomain-atpase Portion Of
The Yeast Chd1 Chromatin Remodeler
Length = 800
Score = 434 bits (1117), Expect = e-122, Method: Compositional matrix adjust.
Identities = 233/540 (43%), Positives = 340/540 (62%), Gaps = 37/540 (6%)
Query: 101 EKVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLEN 160
EK++ QP ++GGELR +QL G+ WM L++ NGILADEMGLGKT+QT+A I++L+
Sbjct: 223 EKLSVQPPFIKGGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFA 282
Query: 161 KGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMRE-EFFSE---RGR- 215
+ GPH+IV P + +P W++ F WAP + + Y G R +RE EF++ +G+
Sbjct: 283 RRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFYTNPRAKGKK 342
Query: 216 ---FNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLT 272
FNVL+T Y+ I++DR L ++W +M VDE HRLKN E +L ++++ +++ R+L+T
Sbjct: 343 TMKFNVLLTTYEYILKDRAELGSIKWQFMAVDEAHRLKNAESSLYESLNSFKVANRMLIT 402
Query: 273 GTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHV 332
GTP+QN+++EL +L+NFL+P F + + F+++ DEEQ I LH
Sbjct: 403 GTPLQNNIKELAALVNFLMPGRFTIDQEID------FENQ------DEEQEEYIHDLHRR 450
Query: 333 IRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-GKSKSLQ 391
I+PFILRR K +VEK LP K++ IL+ ++S Q YY+ + L G G SL
Sbjct: 451 IQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTAGAKGGHFSLL 510
Query: 392 NLSMQLRKCCNHPYLF----------VGEYNMWRKEEI---IRASGKFELLDRLLPKLRK 438
N+ +L+K NHPYLF G+ M R+ + I +SGK LLD+LL +L+K
Sbjct: 511 NIMNELKKASNHPYLFDNAEERVLQKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKK 570
Query: 439 SGHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLL 498
GHRVL+FSQM R++DIL YL + F RLDG+ + +R + FN+PDS F+FLL
Sbjct: 571 DGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPDSNDFVFLL 630
Query: 499 STRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVI 558
STRAGGLG+NL TADTV+IFDSDWNPQ D QA RAHRIGQK V V+ LVS ++EE +
Sbjct: 631 STRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEV 690
Query: 559 LERAKQKMGIDAKVIQAGLFN---TTSTAQDRREMLKEIMRRGTSSLGTDVPSEREINRL 615
LERA++KM ++ +I G+ + T + L I++ G ++ T +++++ L
Sbjct: 691 LERARKKMILEYAIISLGVTDGNKYTKKNEPNAGELSAILKFGAGNMFTATDNQKKLEDL 750
>pdb|1Z3I|X Chain X, Structure Of The Swi2SNF2 CHROMATIN REMODELING DOMAIN OF
EUKARYOTIC Rad54
Length = 644
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 159/494 (32%), Positives = 259/494 (52%), Gaps = 35/494 (7%)
Query: 115 LRAYQLEGLQWMLSLFN-----NNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHV- 168
LR +Q EG++++ N+ I+ADEMGLGKT+Q I LI LL+ P +
Sbjct: 56 LRPHQREGVKFLWDCVTGRRIENSYGCIMADEMGLGKTLQCITLIWTLLKQSPDCKPEID 115
Query: 169 ---IVAPKAVLPNWINEFSTW-APSIAAVVYDG-RPDERKAMREEFFSERGR---FNVLI 220
+V+P +++ NW NE W + V DG DE + F S++G +LI
Sbjct: 116 KVIVVSPSSLVRNWYNEVGKWLGGRVQPVAIDGGSKDEIDSKLVNFISQQGMRIPTPILI 175
Query: 221 THYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSL 280
Y+ + L K + +I DEGHRLKN + ++ QRR+L++GTPIQN L
Sbjct: 176 ISYETFRLHAEVLHKGKVGLVICDEGHRLKNSDNQTYLALNSMNAQRRVLISGTPIQNDL 235
Query: 281 QELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLL---IIRRLHHVIRPFI 337
E +SL++F+ I + + F++ F P +D+++ ++ L ++ +
Sbjct: 236 LEYFSLVHFVNSGILGTAQEFKKRFEIPILKGRDADASDKDRAAGEQKLQELISIVNRCL 295
Query: 338 LRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKSLQNLSMQL 397
+RR D + KYLP K + ++ C+++ QK Y+ + TGK S+
Sbjct: 296 IRRTSDILSKYLPVKIEQVVCCNLTPLQKELYKLFLKQAKPVESLQTGKISVSSLSSITS 355
Query: 398 -RKCCNHPYL-----------FVGEYNMWRKEEIIRA-----SGKFELLDRLLPKLRKS- 439
+K CNHP L F G +++ + +A SGK +LD +L R +
Sbjct: 356 LKKLCNHPALIYEKCLTGEEGFDGALDLFPQNYSTKAVEPQLSGKMLVLDYILAMTRTTT 415
Query: 440 GHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLS 499
+V+L S T+ +D+ E + + ++RLDG+ ++R ++++FN P SP F+F+LS
Sbjct: 416 SDKVVLVSNYTQTLDLFEKLCRNRRYLYVRLDGTMSIKKRAKIVERFNNPSSPEFIFMLS 475
Query: 500 TRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVIL 559
++AGG GLNL A+ +++FD DWNP D+QA R R GQKK ++ L+S G+IEE IL
Sbjct: 476 SKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSTGTIEEKIL 535
Query: 560 ERAKQKMGIDAKVI 573
+R K + + V+
Sbjct: 536 QRQAHKKALSSCVV 549
>pdb|1Z6A|A Chain A, Sulfolobus Solfataricus Swi2SNF2 ATPASE CORE DOMAIN
Length = 500
Score = 225 bits (574), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 151/471 (32%), Positives = 252/471 (53%), Gaps = 36/471 (7%)
Query: 113 GELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVAP 172
LR YQ++G WM + LAD+MGLGKT+QTIA+ + + +T P +++ P
Sbjct: 36 ANLRPYQIKGFSWMRFMNKLGFGICLADDMGLGKTLQTIAVFSDAKKENELT-PSLVICP 94
Query: 173 KAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLITHYDLIMRDRQY 232
+VL NW E S +AP + V+ ++R ++ E +++++T Y +++RD +
Sbjct: 95 LSVLKNWEEELSKFAPHLRFAVFH---EDRSKIKLE------DYDIILTTYAVLLRDTR- 144
Query: 233 LKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQELWSLLNFLLP 292
LK+V+W Y+++DE +KN + + K + + + R+ LTGTPI+N + +LWS++ FL P
Sbjct: 145 LKEVEWKYIVIDEAQNIKNPQTKIFKAVKELKSKYRIALTGTPIENKVDDLWSIMTFLNP 204
Query: 293 TIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKDE--VEKYLP 350
+ S F+ F P K +A EE L +I PFILRR K + + LP
Sbjct: 205 GLLGSYSEFKSKFATPIKKGDNMA--KEE-------LKAIISPFILRRTKYDKAIINDLP 255
Query: 351 GKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKSLQNLS--MQLRKCCNHPYLFV 408
K + + C+++ Q Y+ + +D+ TG + LS ++L++ +HP L
Sbjct: 256 DKIETNVYCNLTPEQAAMYKAEVENLFNNIDSVTGIKRKGMILSTLLKLKQIVDHPALLK 315
Query: 409 GEYNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILE--IYLKLN-DF 465
G E+ +R SGK ++ + G ++ +F+Q + I+ I +LN +
Sbjct: 316 G------GEQSVRRSGKMIRTMEIIEEALDEGDKIAIFTQFVDMGKIIRNIIEKELNTEV 369
Query: 466 KFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQ 525
FL G +ER ++ +F S F+ +LS +AGG G+NL +A+ VI FD WNP
Sbjct: 370 PFLY--GELSKKERDDIISKFQNNPSVKFI-VLSVKAGGFGINLTSANRVIHFDRWWNPA 426
Query: 526 MDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAG 576
++ QA DR +RIGQ + V V L+SVG++EE I + K + +I +G
Sbjct: 427 VEDQATDRVYRIGQTRNVIVHKLISVGTLEEKIDQLLAFKRSLFKDIISSG 477
>pdb|1Z63|A Chain A, Sulfolobus Solfataricus Swi2SNF2 ATPASE CORE IN COMPLEX
With Dsdna
pdb|1Z63|B Chain B, Sulfolobus Solfataricus Swi2SNF2 ATPASE CORE IN COMPLEX
With Dsdna
Length = 500
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 153/473 (32%), Positives = 252/473 (53%), Gaps = 40/473 (8%)
Query: 113 GELRAYQLEGLQWMLSLFNNNLN-GI-LADEMGLGKTIQTIALIAYLLENKGVTGPHVIV 170
LR YQ++G W F N L GI LAD+ GLGKT+QTIA+ + + +T P +++
Sbjct: 36 ANLRPYQIKGFSW--XRFXNKLGFGICLADDXGLGKTLQTIAVFSDAKKENELT-PSLVI 92
Query: 171 APKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLITHYDLIMRDR 230
P +VL NW E S +AP + V+ ++R ++ E +++++T Y +++RD
Sbjct: 93 CPLSVLKNWEEELSKFAPHLRFAVFH---EDRSKIKLE------DYDIILTTYAVLLRDT 143
Query: 231 QYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQELWSLLNFL 290
+ LK+V+W Y+++DE +KN + + K + + + R+ LTGTPI+N + +LWS+ FL
Sbjct: 144 R-LKEVEWKYIVIDEAQNIKNPQTKIFKAVKELKSKYRIALTGTPIENKVDDLWSIXTFL 202
Query: 291 LPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKDE--VEKY 348
P + S F+ F P K +G +E L +I PFILRR K + +
Sbjct: 203 NPGLLGSYSEFKSKFATPIK-KGDNXAKEE--------LKAIISPFILRRTKYDKAIIND 253
Query: 349 LPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKSLQNLS--MQLRKCCNHPYL 406
LP K + + C+++ Q Y+ + +D+ TG + LS ++L++ +HP L
Sbjct: 254 LPDKIETNVYCNLTPEQAAXYKAEVENLFNNIDSVTGIKRKGXILSTLLKLKQIVDHPAL 313
Query: 407 FVGEYNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILE--IYLKLN- 463
G E+ +R SGK ++ + G ++ +F+Q I+ I +LN
Sbjct: 314 LKG------GEQSVRRSGKXIRTXEIIEEALDEGDKIAIFTQFVDXGKIIRNIIEKELNT 367
Query: 464 DFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWN 523
+ FL G +ER ++ +F S F+ +LS +AGG G+NL +A+ VI FD WN
Sbjct: 368 EVPFLY--GELSKKERDDIISKFQNNPSVKFI-VLSVKAGGFGINLTSANRVIHFDRWWN 424
Query: 524 PQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAG 576
P ++ QA DR +RIGQ + V V L+SVG++EE I + K + +I +G
Sbjct: 425 PAVEDQATDRVYRIGQTRNVIVHKLISVGTLEEKIDQLLAFKRSLFKDIISSG 477
>pdb|1Z5Z|A Chain A, Sulfolobus Solfataricus Swi2SNF2 ATPASE C-Terminal Domain
pdb|1Z5Z|B Chain B, Sulfolobus Solfataricus Swi2SNF2 ATPASE C-Terminal Domain
Length = 271
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 121/233 (51%), Gaps = 14/233 (6%)
Query: 349 LPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKSLQNLS--MQLRKCCNHPYL 406
LP K + + C+++ Q Y+ + +D+ TG + LS ++L++ +HP L
Sbjct: 25 LPDKIETNVYCNLTPEQAAMYKAEVENLFNNIDSVTGIKRKGMILSTLLKLKQIVDHPAL 84
Query: 407 FVGEYNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILE--IYLKLN- 463
G E+ +R SGK ++ + G ++ +F+Q + I+ I +LN
Sbjct: 85 LKG------GEQSVRRSGKMIRTMEIIEEALDEGDKIAIFTQFVDMGKIIRNIIEKELNT 138
Query: 464 DFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWN 523
+ FL G +ER ++ +F S F+ +LS +AGG G+NL +A+ VI FD WN
Sbjct: 139 EVPFLY--GELSKKERDDIISKFQNNPSVKFI-VLSVKAGGFGINLTSANRVIHFDRWWN 195
Query: 524 PQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAG 576
P ++ QA DR +RIGQ + V V L+SVG++EE I + K + +I +G
Sbjct: 196 PAVEDQATDRVYRIGQTRNVIVHKLISVGTLEEKIDQLLAFKRSLFKDIISSG 248
>pdb|3DMQ|A Chain A, Crystal Structure Of Rapa, A Swi2SNF2 PROTEIN THAT
Recycles Rna Polymerase During Transcription
pdb|3DMQ|B Chain B, Crystal Structure Of Rapa, A Swi2SNF2 PROTEIN THAT
Recycles Rna Polymerase During Transcription
Length = 968
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 137 ILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYD 196
+LADE+GLGKTI+ ++ L + G +I+ P+ + W+ E ++ ++D
Sbjct: 174 LLADEVGLGKTIEAGXILHQQLLS-GAAERVLIIVPETLQHQWLVE-XLRRFNLRFALFD 231
Query: 197 GRPDERKA-MREEFFSERGRFNVLITHYDLIMRDRQ---YLKKVQWIYMIVDEGHRLKNH 252
DER A + + ++ ++I D R +Q +L + +W ++VDE H L
Sbjct: 232 ---DERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWS 288
Query: 253 ECALAKTISGYQ-----IQRRLLLTGTPIQNSLQELWSLLNFLLPTIFNSVENFEE 303
E A ++ + + LLLT TP Q + ++ L L P F+ F E
Sbjct: 289 EDAPSREYQAIEQLAEHVPGVLLLTATPEQLGXESHFARLRLLDPNRFHDFAQFVE 344
Score = 36.2 bits (82), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 497 LLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFV 547
LL + G G N Q A + FD +NP + +Q R RIGQ ++++ V
Sbjct: 560 LLCSEIGSEGRNFQFASHXVXFDLPFNPDLLEQRIGRLDRIGQAHDIQIHV 610
>pdb|2P6N|A Chain A, Human Dead-box Rna Helicase Ddx41, Helicase Domain
pdb|2P6N|B Chain B, Human Dead-box Rna Helicase Ddx41, Helicase Domain
Length = 191
Score = 36.6 bits (83), Expect = 0.061, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 9/108 (8%)
Query: 432 LLPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDS 491
LL L+K+ VL+F++ +D + YL L + + + G EER ++ F
Sbjct: 46 LLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKK 105
Query: 492 PYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQ 539
L++T GL+ VI +D M ++ E+ HRIG+
Sbjct: 106 D---VLVATDVASKGLDFPAIQHVINYD------MPEEIENYVHRIGR 144
>pdb|1JCU|A Chain A, Solution Structure Of Mth1692 Protein From
Methanobacterium Thermoautotrophicum
Length = 208
Score = 30.4 bits (67), Expect = 4.0, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 526 MDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQ 585
+D+ A R R+ + + V + V ++E+ R + G ++++ L +
Sbjct: 44 LDEDAVRRLFRVKGRSPHKP-VSICVSCVDEI--PRFSRPSGDAMELMERILPGPYTVVL 100
Query: 586 DRREMLKEIMRRGTSSLGTDVPSEREINRLAAR 618
+R E++ +++ G+S +G VP + R+AAR
Sbjct: 101 ERNELIPDVITGGSSRVGIRVPDDEICRRIAAR 133
>pdb|3HGT|A Chain A, Structural And Functional Studies Of The Yeast Class Ii
Hda1 Hdac Complex
pdb|3HGT|B Chain B, Structural And Functional Studies Of The Yeast Class Ii
Hda1 Hdac Complex
Length = 328
Score = 30.0 bits (66), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 10/95 (10%)
Query: 388 KSLQNLSMQLRKCCNHPYLFVGEYNMWRKEEIIR--------ASGKFELLDRLLPKLRKS 439
+S++ + + HPYL + Y K I R SGKF +L L+ +++
Sbjct: 67 ESMKTMCLNGSLVATHPYLLIDHY--MPKSLITRDVPAHLAENSGKFSVLRDLINLVQEY 124
Query: 440 GHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGST 474
+ + R MD+LE L N R DG +
Sbjct: 125 ETETAIVCRPGRTMDLLEALLLGNKVHIKRYDGHS 159
>pdb|3IYD|C Chain C, Three-Dimensional Em Structure Of An Intact
Activator-Dependent Transcription Initiation Complex
pdb|4IGC|C Chain C, X-ray Crystal Structure Of Escherichia Coli Sigma70
Holoenzyme
pdb|4IGC|H Chain H, X-ray Crystal Structure Of Escherichia Coli Sigma70
Holoenzyme
Length = 1342
Score = 29.3 bits (64), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 554 IEEVILERAKQKMGIDAKVIQAGLFN----TTSTAQDRREMLKEIMRRGTSSLG-TDVPS 608
IEE+ L++AK+ + + ++++AGLF+ E L ++ R LG TD
Sbjct: 948 IEEMQLKQAKKDLSEELQILEAGLFSRIRAVLVAGGVEAEKLDKLPRDRWLELGLTDEEK 1007
Query: 609 EREINRLAARSDEEFWLFEKMDEERRQK 636
+ ++ +LA + DE FEK E +R+K
Sbjct: 1008 QNQLEQLAEQYDELKHEFEKKLEAKRRK 1035
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.134 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,889,111
Number of Sequences: 62578
Number of extensions: 946986
Number of successful extensions: 2292
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 2250
Number of HSP's gapped (non-prelim): 31
length of query: 832
length of database: 14,973,337
effective HSP length: 107
effective length of query: 725
effective length of database: 8,277,491
effective search space: 6001180975
effective search space used: 6001180975
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)