BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003311
(832 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6DIC0|SMCA2_MOUSE Probable global transcription activator SNF2L2 OS=Mus musculus
GN=Smarca2 PE=1 SV=1
Length = 1577
Score = 648 bits (1672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/646 (51%), Positives = 442/646 (68%), Gaps = 39/646 (6%)
Query: 88 GQRQYNSAIHSIEEKVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKT 147
G + Y + H+I E+V +Q LL G L+ YQL+GL+WM+SL+NNNLNGILADEMGLGKT
Sbjct: 702 GSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKT 761
Query: 148 IQTIALIAYLLENKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMRE 207
IQTIALI YL+E+K + GP++I+ P + L NW EF WAPS+ + Y G P R+++
Sbjct: 762 IQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVP 821
Query: 208 EFFSERGRFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTI-SGYQIQ 266
+ S G+FNVL+T Y+ I++D+ L K++W YMIVDEGHR+KNH C L + + + Y
Sbjct: 822 QLRS--GKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAP 879
Query: 267 RRLLLTGTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQ-VALTDEEQLLI 325
RR+LLTGTP+QN L ELW+LLNFLLPTIF S FE+WFNAPF G+ V L +EE +LI
Sbjct: 880 RRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILI 939
Query: 326 IRRLHHVIRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTG-- 383
IRRLH V+RPF+LRR K EVE LP K + ++KCDMSA QK+ Y+ + G + D
Sbjct: 940 IRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEK 999
Query: 384 ----TGKSKSLQNLSMQLRKCCNHPYLF----------VGEYN-MWRKEEIIRASGKFEL 428
G +K+L N MQLRK CNHPY+F +G N + E+ RASGKFEL
Sbjct: 1000 DKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFEL 1059
Query: 429 LDRLLPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNA 488
LDR+LPKLR + HRVLLF QMT LM I+E Y +F +LRLDG+TK+E+R LLK+FN
Sbjct: 1060 LDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNE 1119
Query: 489 PDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVL 548
P S YF+FLLSTRAGGLGLNLQ ADTV+IFDSDWNP D QA+DRAHRIGQ+ EVRV L
Sbjct: 1120 PGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRL 1179
Query: 549 VSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRRGTSSLGTDVPS 608
+V S+EE IL AK K+ +D KVIQAG+F+ S++ +RR L+ I+ + D
Sbjct: 1180 CTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVP 1239
Query: 609 ERE-INRLAARSDEEFWLFEKMDEERRQKE----NYRSRLMEDHEVPEWAYSAPDNKEEQ 663
+ E +N++ AR +EEF LF +MD +RR+++ + RLME+ E+P W D+ E +
Sbjct: 1240 DDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIK--DDAEVE 1297
Query: 664 K-----GFEKGFGHESSSITGKRKRKEVVYADTLSDLQWMKAVENG 704
+ EK FG G R+R++V Y+D L++ QW++A+E+G
Sbjct: 1298 RLTCEEEEEKIFGR------GSRQRRDVDYSDALTEKQWLRAIEDG 1337
>sp|P51531|SMCA2_HUMAN Probable global transcription activator SNF2L2 OS=Homo sapiens
GN=SMARCA2 PE=1 SV=2
Length = 1590
Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/646 (51%), Positives = 442/646 (68%), Gaps = 39/646 (6%)
Query: 88 GQRQYNSAIHSIEEKVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKT 147
G + Y + H+I E+V +Q LL G L+ YQL+GL+WM+SL+NNNLNGILADEMGLGKT
Sbjct: 697 GSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKT 756
Query: 148 IQTIALIAYLLENKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMRE 207
IQTIALI YL+E+K + GP++I+ P + L NW EF WAPS+ + Y G P R+++
Sbjct: 757 IQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVP 816
Query: 208 EFFSERGRFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTI-SGYQIQ 266
+ S G+FNVL+T Y+ I++D+ L K++W YMIVDEGHR+KNH C L + + + Y
Sbjct: 817 QLRS--GKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAP 874
Query: 267 RRLLLTGTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQ-VALTDEEQLLI 325
RR+LLTGTP+QN L ELW+LLNFLLPTIF S FE+WFNAPF G+ V L +EE +LI
Sbjct: 875 RRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILI 934
Query: 326 IRRLHHVIRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTG-- 383
IRRLH V+RPF+LRR K EVE LP K + ++KCDMSA QK+ Y+ + G + D
Sbjct: 935 IRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEK 994
Query: 384 ----TGKSKSLQNLSMQLRKCCNHPYLF----------VGEYN-MWRKEEIIRASGKFEL 428
G +K+L N MQLRK CNHPY+F +G N + E+ RASGKFEL
Sbjct: 995 DKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFEL 1054
Query: 429 LDRLLPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNA 488
LDR+LPKLR + HRVLLF QMT LM I+E Y +F +LRLDG+TK+E+R LLK+FN
Sbjct: 1055 LDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNE 1114
Query: 489 PDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVL 548
P S YF+FLLSTRAGGLGLNLQ ADTV+IFDSDWNP D QA+DRAHRIGQ+ EVRV L
Sbjct: 1115 PGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRL 1174
Query: 549 VSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRRGTSSLGTDVPS 608
+V S+EE IL AK K+ +D KVIQAG+F+ S++ +RR L+ I+ + D
Sbjct: 1175 CTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVP 1234
Query: 609 ERE-INRLAARSDEEFWLFEKMDEERRQKE----NYRSRLMEDHEVPEWAYSAPDNKEEQ 663
+ E +N++ AR +EEF LF +MD +RR+++ + RLME+ E+P W D+ E +
Sbjct: 1235 DDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIK--DDAEVE 1292
Query: 664 K-----GFEKGFGHESSSITGKRKRKEVVYADTLSDLQWMKAVENG 704
+ EK FG G R+R++V Y+D L++ QW++A+E+G
Sbjct: 1293 RLTCEEEEEKIFGR------GSRQRRDVDYSDALTEKQWLRAIEDG 1332
>sp|A7Z019|SMCA4_BOVIN Transcription activator BRG1 OS=Bos taurus GN=SMARCA4 PE=2 SV=1
Length = 1606
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/678 (50%), Positives = 452/678 (66%), Gaps = 55/678 (8%)
Query: 68 PEEDDI--IDSDH---------NDDSG---DLLEGQRQYNSAIHSIEEKVTEQPTLLQGG 113
P+ DD+ +D+ H +D+ G L G + Y + H++ E+V +Q L+ G
Sbjct: 685 PDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNG 744
Query: 114 ELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVAPK 173
L+ YQ++GL+W++SL+NNNLNGILADEMGLGKTIQTIALI YL+E+K + GP +I+ P
Sbjct: 745 VLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPL 804
Query: 174 AVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLITHYDLIMRDRQYL 233
+ L NW EF WAPS+ V Y G P R+A + S G+FNVL+T Y+ I++D+ L
Sbjct: 805 STLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRS--GKFNVLLTTYEYIIKDKHIL 862
Query: 234 KKVQWIYMIVDEGHRLKNHECALAKTI-SGYQIQRRLLLTGTPIQNSLQELWSLLNFLLP 292
K++W YMIVDEGHR+KNH C L + + + Y RRLLLTGTP+QN L ELW+LLNFLLP
Sbjct: 863 AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLP 922
Query: 293 TIFNSVENFEEWFNAPFKDRGQ-VALTDEEQLLIIRRLHHVIRPFILRRKKDEVEKYLPG 351
TIF S FE+WFNAPF G+ V L +EE +LIIRRLH V+RPF+LRR K EVE LP
Sbjct: 923 TIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPE 982
Query: 352 KSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-------GKSKSLQNLSMQLRKCCNHP 404
K + ++KCDMSA Q+V Y+ + G V L G+ G +K+L N MQLRK CNHP
Sbjct: 983 KVEYVIKCDMSALQRVLYRHMQAKG-VLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHP 1041
Query: 405 YLF------VGEY-----NMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLM 453
Y+F E+ + + ++ RASGKFELLDR+LPKLR + H+VLLF QMT LM
Sbjct: 1042 YMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLM 1101
Query: 454 DILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTAD 513
I+E Y FK+LRLDG+TK E+RG LLK FN P S YF+FLLSTRAGGLGLNLQ+AD
Sbjct: 1102 TIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSAD 1161
Query: 514 TVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVI 573
TVIIFDSDWNP D QA+DRAHRIGQ+ EVRV L +V S+EE IL AK K+ +D KVI
Sbjct: 1162 TVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI 1221
Query: 574 QAGLFNTTSTAQDRREMLKEIMRRGTSSLGTDVPSERE-INRLAARSDEEFWLFEKMDEE 632
QAG+F+ S++ +RR L+ I+ D + E +N++ AR +EEF LF +MD +
Sbjct: 1222 QAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLD 1281
Query: 633 RRQKE----NYRSRLMEDHEVPEWAYSAPDNKEEQK-----GFEKGFGHESSSITGKRKR 683
RR++E + RLME+ E+P W D+ E ++ EK FG G R R
Sbjct: 1282 RRREEARNPKRKPRLMEEDELPSWIIK--DDAEVERLTCEEEEEKMFGR------GSRHR 1333
Query: 684 KEVVYADTLSDLQWMKAV 701
KEV Y+D+L++ QW+KA+
Sbjct: 1334 KEVDYSDSLTEKQWLKAI 1351
>sp|Q3TKT4|SMCA4_MOUSE Transcription activator BRG1 OS=Mus musculus GN=Smarca4 PE=1 SV=1
Length = 1613
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/678 (50%), Positives = 452/678 (66%), Gaps = 55/678 (8%)
Query: 68 PEEDDI--IDSDH---------NDDSG---DLLEGQRQYNSAIHSIEEKVTEQPTLLQGG 113
P+ DD+ +D+ H +D+ G L G + Y + H++ E+V +Q L+ G
Sbjct: 693 PDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNG 752
Query: 114 ELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVAPK 173
L+ YQ++GL+W++SL+NNNLNGILADEMGLGKTIQTIALI YL+E+K + GP +I+ P
Sbjct: 753 VLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPL 812
Query: 174 AVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLITHYDLIMRDRQYL 233
+ L NW EF WAPS+ V Y G P R+A + S G+FNVL+T Y+ I++D+ L
Sbjct: 813 STLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRS--GKFNVLLTTYEYIIKDKHIL 870
Query: 234 KKVQWIYMIVDEGHRLKNHECALAKTI-SGYQIQRRLLLTGTPIQNSLQELWSLLNFLLP 292
K++W YMIVDEGHR+KNH C L + + + Y RRLLLTGTP+QN L ELW+LLNFLLP
Sbjct: 871 AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLP 930
Query: 293 TIFNSVENFEEWFNAPFKDRGQ-VALTDEEQLLIIRRLHHVIRPFILRRKKDEVEKYLPG 351
TIF S FE+WFNAPF G+ V L +EE +LIIRRLH V+RPF+LRR K EVE LP
Sbjct: 931 TIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPE 990
Query: 352 KSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-------GKSKSLQNLSMQLRKCCNHP 404
K + ++KCDMSA Q+V Y+ + G V L G+ G +K+L N MQLRK CNHP
Sbjct: 991 KVEYVIKCDMSALQRVLYRHMQAKG-VLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHP 1049
Query: 405 YLF------VGEY-----NMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLM 453
Y+F E+ + + ++ RASGKFELLDR+LPKLR + H+VLLF QMT LM
Sbjct: 1050 YMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLM 1109
Query: 454 DILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTAD 513
I+E Y FK+LRLDG+TK E+RG LLK FN P S YF+FLLSTRAGGLGLNLQ+AD
Sbjct: 1110 TIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSAD 1169
Query: 514 TVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVI 573
TVIIFDSDWNP D QA+DRAHRIGQ+ EVRV L +V S+EE IL AK K+ +D KVI
Sbjct: 1170 TVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI 1229
Query: 574 QAGLFNTTSTAQDRREMLKEIMRRGTSSLGTDVPSERE-INRLAARSDEEFWLFEKMDEE 632
QAG+F+ S++ +RR L+ I+ D + E +N++ AR +EEF LF +MD +
Sbjct: 1230 QAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLD 1289
Query: 633 RRQKE----NYRSRLMEDHEVPEWAYSAPDNKEEQK-----GFEKGFGHESSSITGKRKR 683
RR++E + RLME+ E+P W D+ E ++ EK FG G R R
Sbjct: 1290 RRREEARNPKRKPRLMEEDELPSWIIK--DDAEVERLTCEEEEEKMFGR------GSRHR 1341
Query: 684 KEVVYADTLSDLQWMKAV 701
KEV Y+D+L++ QW+KA+
Sbjct: 1342 KEVDYSDSLTEKQWLKAI 1359
>sp|Q8K1P7|SMCA4_RAT Transcription activator BRG1 OS=Rattus norvegicus GN=Smarca4 PE=1
SV=1
Length = 1613
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/678 (50%), Positives = 452/678 (66%), Gaps = 55/678 (8%)
Query: 68 PEEDDI--IDSDH---------NDDSG---DLLEGQRQYNSAIHSIEEKVTEQPTLLQGG 113
P+ DD+ +D+ H +D+ G L G + Y + H++ E+V +Q L+ G
Sbjct: 693 PDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNG 752
Query: 114 ELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVAPK 173
L+ YQ++GL+W++SL+NNNLNGILADEMGLGKTIQTIALI YL+E+K + GP +I+ P
Sbjct: 753 VLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPL 812
Query: 174 AVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLITHYDLIMRDRQYL 233
+ L NW EF WAPS+ V Y G P R+A + S G+FNVL+T Y+ I++D+ L
Sbjct: 813 STLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRS--GKFNVLLTTYEYIIKDKHIL 870
Query: 234 KKVQWIYMIVDEGHRLKNHECALAKTI-SGYQIQRRLLLTGTPIQNSLQELWSLLNFLLP 292
K++W YMIVDEGHR+KNH C L + + + Y RRLLLTGTP+QN L ELW+LLNFLLP
Sbjct: 871 AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLP 930
Query: 293 TIFNSVENFEEWFNAPFKDRGQ-VALTDEEQLLIIRRLHHVIRPFILRRKKDEVEKYLPG 351
TIF S FE+WFNAPF G+ V L +EE +LIIRRLH V+RPF+LRR K EVE LP
Sbjct: 931 TIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPE 990
Query: 352 KSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-------GKSKSLQNLSMQLRKCCNHP 404
K + ++KCDMSA Q+V Y+ + G V L G+ G +K+L N MQLRK CNHP
Sbjct: 991 KVEYVIKCDMSALQRVLYRHMQAKG-VLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHP 1049
Query: 405 YLF------VGEY-----NMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLM 453
Y+F E+ + + ++ RASGKFELLDR+LPKLR + H+VLLF QMT LM
Sbjct: 1050 YMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLM 1109
Query: 454 DILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTAD 513
I+E Y FK+LRLDG+TK E+RG LLK FN P S YF+FLLSTRAGGLGLNLQ+AD
Sbjct: 1110 TIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSAD 1169
Query: 514 TVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVI 573
TVIIFDSDWNP D QA+DRAHRIGQ+ EVRV L +V S+EE IL AK K+ +D KVI
Sbjct: 1170 TVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI 1229
Query: 574 QAGLFNTTSTAQDRREMLKEIMRRGTSSLGTDVPSERE-INRLAARSDEEFWLFEKMDEE 632
QAG+F+ S++ +RR L+ I+ D + E +N++ AR +EEF LF +MD +
Sbjct: 1230 QAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLD 1289
Query: 633 RRQKE----NYRSRLMEDHEVPEWAYSAPDNKEEQK-----GFEKGFGHESSSITGKRKR 683
RR++E + RLME+ E+P W D+ E ++ EK FG G R R
Sbjct: 1290 RRREEARNPKRKPRLMEEDELPSWIIK--DDAEVERLTCEEEEEKMFGR------GSRHR 1341
Query: 684 KEVVYADTLSDLQWMKAV 701
KEV Y+D+L++ QW+KA+
Sbjct: 1342 KEVDYSDSLTEKQWLKAI 1359
>sp|P51532|SMCA4_HUMAN Transcription activator BRG1 OS=Homo sapiens GN=SMARCA4 PE=1 SV=2
Length = 1647
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/711 (48%), Positives = 457/711 (64%), Gaps = 88/711 (12%)
Query: 68 PEEDDI--IDSDH---------NDDSG---DLLEGQRQYNSAIHSIEEKVTEQPTLLQGG 113
P+ DD+ +D+ H +D+ G L G + Y + H++ E+V +Q L+ G
Sbjct: 693 PDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNG 752
Query: 114 ELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVAPK 173
L+ YQ++GL+W++SL+NNNLNGILADEMGLGKTIQTIALI YL+E+K + GP +I+ P
Sbjct: 753 VLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPL 812
Query: 174 AVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLITHYDLIMRDRQYL 233
+ L NW EF WAPS+ V Y G P R+A + S G+FNVL+T Y+ I++D+ L
Sbjct: 813 STLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRS--GKFNVLLTTYEYIIKDKHIL 870
Query: 234 KKVQWIYMIVDEGHRLKNHECALAKTI-SGYQIQRRLLLTGTPIQNSLQELWSLLNFLLP 292
K++W YMIVDEGHR+KNH C L + + + Y RRLLLTGTP+QN L ELW+LLNFLLP
Sbjct: 871 AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLP 930
Query: 293 TIFNSVENFEEWFNAPFKDRGQ-VALTDEEQLLIIRRLHHVIRPFILRRKKDEVEKYLPG 351
TIF S FE+WFNAPF G+ V L +EE +LIIRRLH V+RPF+LRR K EVE LP
Sbjct: 931 TIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPE 990
Query: 352 KSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-------GKSKSLQNLSMQLRKCCNHP 404
K + ++KCDMSA Q+V Y+ + G V L G+ G +K+L N MQLRK CNHP
Sbjct: 991 KVEYVIKCDMSALQRVLYRHMQAKG-VLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHP 1049
Query: 405 YLF------VGEY-----NMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLM 453
Y+F E+ + + ++ RASGKFELLDR+LPKLR + H+VLLF QMT LM
Sbjct: 1050 YMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLM 1109
Query: 454 DILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTAD 513
I+E Y FK+LRLDG+TK E+RG LLK FN P S YF+FLLSTRAGGLGLNLQ+AD
Sbjct: 1110 TIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSAD 1169
Query: 514 TVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVI 573
TVIIFDSDWNP D QA+DRAHRIGQ+ EVRV L +V S+EE IL AK K+ +D KVI
Sbjct: 1170 TVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI 1229
Query: 574 QAGLFNTTSTAQDRREMLKEIMRR-------------GTSSLG----------------- 603
QAG+F+ S++ +RR L+ I+ G++S
Sbjct: 1230 QAGMFDQKSSSHERRAFLQAILEHEEQDESRHCSTGSGSASFAHTAPPPAGVNPDLEEPP 1289
Query: 604 ----TDVPSEREINRLAARSDEEFWLFEKMDEERRQKE----NYRSRLMEDHEVPEWAYS 655
+VP + +N++ AR +EEF LF +MD +RR++E + RLME+ E+P W
Sbjct: 1290 LKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIK 1349
Query: 656 APDNKEEQK-----GFEKGFGHESSSITGKRKRKEVVYADTLSDLQWMKAV 701
D+ E ++ EK FG G R RKEV Y+D+L++ QW+KA+
Sbjct: 1350 --DDAEVERLTCEEEEEKMFGR------GSRHRKEVDYSDSLTEKQWLKAI 1392
>sp|P22082|SNF2_YEAST Transcription regulatory protein SNF2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SNF2 PE=1 SV=1
Length = 1703
Score = 634 bits (1634), Expect = e-180, Method: Compositional matrix adjust.
Identities = 356/833 (42%), Positives = 529/833 (63%), Gaps = 63/833 (7%)
Query: 1 MRLVKESKNERLTTLLEETNKLLVNLGAAVQRQKDSKHVDGIEPLKDSEDDLLDLDASEN 60
++L+ ++K+ R+T LL +TN L +L AV+ Q+ +K++ +++ DL
Sbjct: 668 IKLLDQTKDTRITHLLRQTNAFLDSLTRAVKDQQKYTKEMIDSHIKEASEEVDDLSM--- 724
Query: 61 GTPRDLHPEEDDIIDSDHNDDSGDLLEGQRQYNSAIHSIEEKVTEQPTLLQGGELRAYQL 120
P+ D D D YN A H I+E + +QP++L GG L+ YQ+
Sbjct: 725 -VPKM----------KDEEYDDDDDNSNVDYYNVA-HRIKEDIKKQPSILVGGTLKDYQI 772
Query: 121 EGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVAPKAVLPNWI 180
+GLQWM+SLFNN+LNGILADEMGLGKTIQTI+L+ YL E K + GP++++ P + L NW
Sbjct: 773 KGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEMKNIRGPYLVIVPLSTLSNWS 832
Query: 181 NEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLITHYDLIMRDRQYLKKVQWIY 240
+EF+ WAP++ + + G P+ERKA + + + G F+V++T ++ I+++R L KV+W++
Sbjct: 833 SEFAKWAPTLRTISFKGSPNERKAKQAKIRA--GEFDVVLTTFEYIIKERALLSKVKWVH 890
Query: 241 MIVDEGHRLKNHECALAKTI-SGYQIQRRLLLTGTPIQNSLQELWSLLNFLLPTIFNSVE 299
MI+DEGHR+KN + L+ T+ + Y RL+LTGTP+QN+L ELW+LLNF+LP IFNSV+
Sbjct: 891 MIIDEGHRMKNAQSKLSLTLNTHYHADYRLILTGTPLQNNLPELWALLNFVLPKIFNSVK 950
Query: 300 NFEEWFNAPFKDRG---QVALTDEEQLLIIRRLHHVIRPFILRRKKDEVEKYLPGKSQVI 356
+F+EWFN PF + G ++ L++EE LL+IRRLH V+RPF+LRR K +VEK LP K + +
Sbjct: 951 SFDEWFNTPFANTGGQDKIELSEEETLLVIRRLHKVLRPFLLRRLKKDVEKELPDKVEKV 1010
Query: 357 LKCDMSAWQKVYYQQVTDVGRVGLDTGTGKS----KSLQNLSMQLRKCCNHPYLFV---G 409
+KC MSA Q++ YQQ+ R+ + K + N MQL+K CNHP++F
Sbjct: 1011 VKCKMSALQQIMYQQMLKYRRLFIGDQNNKKMVGLRGFNNQIMQLKKICNHPFVFEEVED 1070
Query: 410 EYNMWRK--EEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKF 467
+ N R+ ++I R +GKFELLDR+LPKL+ +GHRVL+F QMT++MDI+E +L+ + K+
Sbjct: 1071 QINPTRETNDDIWRVAGKFELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKY 1130
Query: 468 LRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMD 527
LRLDG TK++ER LL+ FNAPDS Y F+LSTRAGGLGLNLQTADTVIIFD+DWNP D
Sbjct: 1131 LRLDGHTKSDERSELLRLFNAPDSEYLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQD 1190
Query: 528 QQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDR 587
QA+DRAHRIGQK EVR+ L++ S+EEVILERA +K+ ID KVIQAG F+ ST++++
Sbjct: 1191 LQAQDRAHRIGQKNEVRILRLITTNSVEEVILERAYKKLDIDGKVIQAGKFDNKSTSEEQ 1250
Query: 588 REMLKEIM--------RRGTSSLGTDVPSEREINRLAARSDEEFWLFEKMDEERRQKE-- 637
+L+ ++ +R + + + EIN + AR+DEE + +MDE+R +KE
Sbjct: 1251 EALLRSLLDAEEERRKKRESGVEEEEELKDSEINEILARNDEEMAVLTRMDEDRSKKEEE 1310
Query: 638 -NYRSRLMEDHEVPEWAYSAPDNKEEQKGFEKGFGHESSSIT---GKRKRKEVVYADTLS 693
+SRL+E E+P+ YS D E K E ES+++ G R+RK Y D +S
Sbjct: 1311 LGVKSRLLEKSELPD-IYSR-DIGAELKREES----ESAAVYNGRGARERKTATYNDNMS 1364
Query: 694 DLQWMKAVENGQDISKLSTRGKRREYLPSEGNESASNSTGAEK-KNLDMKNE---IFPLA 749
+ QW++ E D + + + R++ E A + G K +N+D N+ I ++
Sbjct: 1365 EEQWLRQFEVSDD--EKNDKQARKQRTKKEDKSEAIDGNGEIKGENIDADNDGPRINNIS 1422
Query: 750 SE-------GTSEDTFGSAPKRLRFERRNSESSDIQSVEKSEHKGVQGSGLNG 795
+E ++D F S ++ R + ++ E SE ++ S + G
Sbjct: 1423 AEDRADTDLAMNDDDFLSKKRKAGRPRGRPKKVKLEGSENSEPPALESSPVTG 1475
>sp|P25439|BRM_DROME ATP-dependent helicase brm OS=Drosophila melanogaster GN=brm PE=1
SV=2
Length = 1638
Score = 632 bits (1631), Expect = e-180, Method: Compositional matrix adjust.
Identities = 317/638 (49%), Positives = 439/638 (68%), Gaps = 31/638 (4%)
Query: 89 QRQYNSAIHSIEEKVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTI 148
++ Y S H+I EKV EQ +++ G L+ YQ++GL+W++SL+NNNLNGILADEMGLGKTI
Sbjct: 747 EQTYYSIAHTIHEKVVEQASIMVNGTLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTI 806
Query: 149 QTIALIAYLLENKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREE 208
QTI+L+ YL++ K V GP++I+ P + LPNW+ EF WAP++ V Y G P R+ ++ +
Sbjct: 807 QTISLVTYLMDRKKVMGPYLIIVPLSTLPNWVLEFEKWAPAVGVVSYKGSPQGRRLLQNQ 866
Query: 209 FFSERGRFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQR- 267
+ +FNVL+T Y+ +++D+ L K+QW YMI+DEGHR+KNH C L + ++ + I
Sbjct: 867 MRA--TKFNVLLTTYEYVIKDKAVLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPY 924
Query: 268 RLLLTGTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQ-VALTDEEQLLII 326
RLLLTGTP+QN L ELW+LLNFLLP+IF S FE+WFNAPF G+ V L +EE +LII
Sbjct: 925 RLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILII 984
Query: 327 RRLHHVIRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-- 384
RRLH V+RPF+LRR K EVE LP K + I+KCDMSA Q+V Y+ + G V L G+
Sbjct: 985 RRLHKVLRPFLLRRLKKEVEHQLPDKVEYIIKCDMSALQRVLYKHMQSKG-VLLTDGSEK 1043
Query: 385 -----GKSKSLQNLSMQLRKCCNHPYLF----------VGEYNMWRKEEIIRASGKFELL 429
G +K+L N +QLRK CNHP++F G + + ++ R SGKFELL
Sbjct: 1044 GKHGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKYCDHTGGHGVVSGPDLYRVSGKFELL 1103
Query: 430 DRLLPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAP 489
DR+LPKL+ + HRVLLF QMT+ M I+E YL F +LRLDG+TK E+RG LL++FNA
Sbjct: 1104 DRILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGELLRKFNAK 1163
Query: 490 DSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLV 549
S F+FLLSTRAGGLGLNLQTADTV+IFDSDWNP D QA+DRAHRIGQ+ EVRV L+
Sbjct: 1164 GSDVFVFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLM 1223
Query: 550 SVGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRRGTSSLGTDVPSE 609
+V S+EE IL A+ K+ +D KVIQAG+F+ ST +R++ L+ I+ + + +
Sbjct: 1224 TVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFLQTILHQDDNEEEEENEVP 1283
Query: 610 RE--INRLAARSDEEFWLFEKMDEERRQKENY----RSRLMEDHEVPEWAYSAPDNKEEQ 663
+ IN + ARS+EE +F++MD ER++++ R RL+++ E+P+W D E
Sbjct: 1284 DDEMINMMIARSEEEIEIFKRMDAERKKEDEEIHPGRERLIDESELPDWLTKDDDEVER- 1342
Query: 664 KGFEKGFGHESSSITGKRKRKEVVYADTLSDLQWMKAV 701
F + ++ G R+RKEV Y D+L++ +W+KA+
Sbjct: 1343 --FHYQYDEDTILGRGSRQRKEVDYTDSLTEKEWLKAI 1378
>sp|Q9UTN6|SNF21_SCHPO Chromatin structure-remodeling complex subunit snf21
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf21 PE=1 SV=1
Length = 1199
Score = 619 bits (1596), Expect = e-176, Method: Compositional matrix adjust.
Identities = 342/763 (44%), Positives = 469/763 (61%), Gaps = 74/763 (9%)
Query: 1 MRLVKESKNERLTTLLEETNKLLVNLGAAVQRQKDSKHVDGIEPLKDSEDDLLDLDASEN 60
++L+ ++K+ R+T LL +T+ L +L AAV+ Q+ A +
Sbjct: 335 LKLIDQAKDTRITHLLRQTDHYLDSLAAAVKVQQSQ----------------FGESAYDE 378
Query: 61 GTPRDLHPEEDDIIDSDHNDDSGDLLEGQRQYNSAIHSIEEKVTEQPTLLQGGELRAYQL 120
R ++PE+D ID Y + H+I E VTEQP++L GG+L+ YQL
Sbjct: 379 DMDRRMNPEDDRKID----------------YYNVAHNIREVVTEQPSILVGGKLKEYQL 422
Query: 121 EGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVAPKAVLPNWI 180
GLQWM+SL+NN+LNGILADEMGLGKTIQTI+LI +L+E K GP +++ P + L NW
Sbjct: 423 RGLQWMISLYNNHLNGILADEMGLGKTIQTISLITHLIEKKRQNGPFLVIVPLSTLTNWT 482
Query: 181 NEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLITHYDLIMRDRQYLKKVQWIY 240
EF WAPSI +VY G P RKA+ + F VL+T Y+ I++DR L +++WIY
Sbjct: 483 MEFERWAPSIVKIVYKGPPQVRKALHPQV--RHSNFQVLLTTYEYIIKDRPLLSRIKWIY 540
Query: 241 MIVDEGHRLKNHECALAKTISGYQIQR-RLLLTGTPIQNSLQELWSLLNFLLPTIFNSVE 299
MI+DEGHR+KN + L T++ Y R RL+LTGTP+QN+L ELW+LLNF+LP IFNS++
Sbjct: 541 MIIDEGHRMKNTQSKLTNTLTTYYSSRYRLILTGTPLQNNLPELWALLNFVLPRIFNSIK 600
Query: 300 NFEEWFNAPFKDRG---QVALTDEEQLLIIRRLHHVIRPFILRRKKDEVEKYLPGKSQVI 356
+F+EWFN PF + G ++ LT+EE LL+IRRLH V+RPF+LRR K +VE LP K + +
Sbjct: 601 SFDEWFNTPFANTGGQDKMELTEEESLLVIRRLHKVLRPFLLRRLKKDVEAELPDKVEKV 660
Query: 357 LKCDMSAWQKVYYQQVTDVGRVGL-DTGTGKS--KSLQNLSMQLRKCCNHPYLFVG---- 409
++C MS Q+ Y Q+ G + + D GK+ K LQN MQL+K CNHP++F
Sbjct: 661 IRCQMSGLQQKLYYQMKKHGMLYVEDAKRGKTGIKGLQNTVMQLKKICNHPFVFEDVERS 720
Query: 410 ------EYNM-WRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILEIYLKL 462
Y+M WR SGKFELLDR+LPKL +SGHR+L+F QMT++M+I+E YL
Sbjct: 721 IDPTGFNYDMLWR------VSGKFELLDRILPKLFRSGHRILMFFQMTQIMNIMEDYLHY 774
Query: 463 NDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDW 522
+++LRLDGSTK ++R LL FN P + +FLLSTRAGGLGLNLQTADTVIIFDSDW
Sbjct: 775 RQWRYLRLDGSTKADDRSKLLGVFNDPTAEVNLFLLSTRAGGLGLNLQTADTVIIFDSDW 834
Query: 523 NPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTS 582
NP D QA+DRAHRIGQ KEVR++ L++ S+EE IL RA+ K+ ID KVIQAG F+ S
Sbjct: 835 NPHQDLQAQDRAHRIGQTKEVRIYRLITEKSVEENILARAQYKLDIDGKVIQAGKFDNKS 894
Query: 583 TAQDRREMLKEIMRRGTSSLGTDVPSE---REINRLAARSDEEFWLFEKMDEERRQKENY 639
T ++R L+ ++ D E E+N + AR D+E LF++M E+ ++ Y
Sbjct: 895 TPEEREAFLRSLLENENGEEENDEKGELDDDELNEILARGDDELRLFKQMTEDLERESPY 954
Query: 640 -----RSRLMEDHEVPEWAYSAPDNKEEQKGFEKGFGHESSSITGKRKRKEVVYADTLSD 694
+ RL++ E+PE+ K E+ G G R+R VVY + + D
Sbjct: 955 GKNKEKERLIQVSELPEFYQREEPEKTTDLLQEEPLGR------GARRRTPVVYDEAVRD 1008
Query: 695 LQWMKAVENGQDISKLSTRGKRREYLPSEGNESASNSTGAEKK 737
QWM E + TRG+ + + S A G KK
Sbjct: 1009 AQWM--AEMDMESEARPTRGRPKRNIASVDETPALTLNGKPKK 1049
>sp|P32597|STH1_YEAST Nuclear protein STH1/NPS1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=STH1 PE=1 SV=1
Length = 1359
Score = 607 bits (1566), Expect = e-172, Method: Compositional matrix adjust.
Identities = 338/733 (46%), Positives = 470/733 (64%), Gaps = 78/733 (10%)
Query: 1 MRLVKESKNERLTTLLEETNKLLVNLGAAVQRQKDSK---HVDGIEPLKDSEDDLLDLDA 57
++L+ ++K+ R+T LL +TN L +L AV+ Q++ H + ++P+ D E + D
Sbjct: 390 LKLLDQTKDTRITQLLRQTNSFLDSLSEAVRAQQNEAKILHGEEVQPITDEEREKTD--- 446
Query: 58 SENGTPRDLHPEEDDIIDSDHNDDSGDLLEGQRQYNSAIHSIEEKVTEQPTLLQGGELRA 117
Y H I+EK+ +QP++L GG L+
Sbjct: 447 ----------------------------------YYEVAHRIKEKIDKQPSILVGGTLKE 472
Query: 118 YQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVAPKAVLP 177
YQL GL+WM+SL+NN+LNGILADEMGLGKTIQ+I+LI YL E K GP +++ P + +
Sbjct: 473 YQLRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITYLYEVKKDIGPFLVIVPLSTIT 532
Query: 178 NWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLITHYDLIMRDRQYLKKVQ 237
NW EF WAPS+ ++Y G P++R +++ + G F+VL+T Y+ I++D+ L K
Sbjct: 533 NWTLEFEKWAPSLNTIIYKGTPNQRHSLQHQI--RVGNFDVLLTTYEYIIKDKSLLSKHD 590
Query: 238 WIYMIVDEGHRLKNHECALAKTISGY-QIQRRLLLTGTPIQNSLQELWSLLNFLLPTIFN 296
W +MI+DEGHR+KN + L+ TIS Y + + RL+LTGTP+QN+L ELW+LLNF+LP IFN
Sbjct: 591 WAHMIIDEGHRMKNAQSKLSFTISHYYRTRNRLILTGTPLQNNLPELWALLNFVLPKIFN 650
Query: 297 SVENFEEWFNAPFKDRG---QVALTDEEQLLIIRRLHHVIRPFILRRKKDEVEKYLPGKS 353
S + FE+WFN PF + G ++ LT+EE LLIIRRLH V+RPF+LRR K EVEK LP K
Sbjct: 651 SAKTFEDWFNTPFANTGTQEKLELTEEETLLIIRRLHKVLRPFLLRRLKKEVEKDLPDKV 710
Query: 354 QVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-----GKSKSLQNLSMQLRKCCNHPYLF- 407
+ ++KC +S Q+ YQQ+ + + GT G K L N MQLRK CNHP++F
Sbjct: 711 EKVIKCKLSGLQQQLYQQMLKHNALFVGAGTEGATKGGIKGLNNKIMQLRKICNHPFVFD 770
Query: 408 --VGEYNMWR--KEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILEIYLKLN 463
G N R + + R +GKFELLDR+LPK + SGHRVL+F QMT++MDI+E +L++
Sbjct: 771 EVEGVVNPSRGNSDLLFRVAGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMK 830
Query: 464 DFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWN 523
D K++RLDGSTKTEER +L FNAPDS YF FLLSTRAGGLGLNLQTADTVIIFD+DWN
Sbjct: 831 DLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWN 890
Query: 524 PQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTST 583
P D QA+DRAHRIGQK EVR+ L++ S+EEVILERA QK+ ID KVIQAG F+ ST
Sbjct: 891 PHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKST 950
Query: 584 AQDRREMLKEIMRRGTS--SLGTDVPSEREINRLAARSDEEFWLFEKMDEERRQKENYRS 641
A+++ L+ ++ T+ + E+N ARS +E LF+K+D+ER +E +
Sbjct: 951 AEEQEAFLRRLIESETNRDDDDKAELDDDELNDTLARSADEKILFDKIDKERMNQERADA 1010
Query: 642 ----------RLMEDHEVPEWAYSAPDNKEEQKGFEKGFGHESSSITGK-RKRKEVVYAD 690
RL++ E+P K ++ E+ F E S G+ R++K V Y D
Sbjct: 1011 KAQGLRVPPPRLIQLDELP---------KVFREDIEEHFKKEDSEPLGRIRQKKRVYYDD 1061
Query: 691 TLSDLQWMKAVEN 703
L++ Q+++AVE+
Sbjct: 1062 GLTEEQFLEAVED 1074
>sp|O94421|SNF22_SCHPO SWI/SNF chromatin-remodeling complex subunit snf22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf22 PE=1 SV=2
Length = 1680
Score = 605 bits (1559), Expect = e-172, Method: Compositional matrix adjust.
Identities = 319/671 (47%), Positives = 442/671 (65%), Gaps = 49/671 (7%)
Query: 1 MRLVKESKNERLTTLLEETNKLLVNLGAAVQRQKDSKHVDGIEPLKDSEDDLLDLDASEN 60
++L+ ++K+ R+T LL++T++ L NL AV+ Q+ + H G K S L+ SE
Sbjct: 783 LQLLDKAKDTRITHLLKQTDQYLENLTRAVRIQQSNIH-SGNTSGKGSNSAELEAPISE- 840
Query: 61 GTPRDLHPEEDDIIDSDHNDDSGDLLEGQRQYNSAIHSIEEKVTEQPTLLQGGELRAYQL 120
ED +D Y H I E+V EQP + GG L+ YQL
Sbjct: 841 ---------EDKNLD----------------YFKVAHRIHEEV-EQPKIFVGGTLKDYQL 874
Query: 121 EGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVAPKAVLPNWI 180
+GL+WMLSL+NNNLNGILADEMGLGKTIQTIA I YL+E K GP +I+ P + L NWI
Sbjct: 875 KGLEWMLSLYNNNLNGILADEMGLGKTIQTIAFITYLIEKKNQQGPFLIIVPLSTLTNWI 934
Query: 181 NEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLITHYDLIMRDRQYLKKVQWIY 240
EF WAPS+ + Y G P RK ++ + S FNVL+T ++ I++DR L +++W++
Sbjct: 935 MEFEKWAPSVKKIAYKGPPQLRKTLQSQIRS--SNFNVLLTTFEYIIKDRPLLSRIKWVH 992
Query: 241 MIVDEGHRLKNHECALAKTISGY-QIQRRLLLTGTPIQNSLQELWSLLNFLLPTIFNSVE 299
MI+DEGHR+KN + L T+S Y Q RL+LTGTP+QN+L ELW+LLNF+LP IFNS++
Sbjct: 993 MIIDEGHRIKNTQSKLTSTLSTYYHSQYRLILTGTPLQNNLPELWALLNFVLPKIFNSIK 1052
Query: 300 NFEEWFNAPFKDRG---QVALTDEEQLLIIRRLHHVIRPFILRRKKDEVEKYLPGKSQVI 356
+F+EWFN PF + G ++ L +EE LLII+RLH V+RPF+ RR K +VEK LP K + +
Sbjct: 1053 SFDEWFNTPFANTGGQDKIGLNEEEALLIIKRLHKVLRPFLFRRLKKDVEKELPDKVEKV 1112
Query: 357 LKCDMSAWQKVYYQQVTDVGRVGLDTGTGKS--KSLQNLSMQLRKCCNHPYLF-----VG 409
+KC +S Q YQQ+ G + +D GK+ K LQN MQL+K CNHP++F
Sbjct: 1113 IKCPLSGLQLKLYQQMKKHGMLFVDGEKGKTGIKGLQNTVMQLKKICNHPFIFEDVERAI 1172
Query: 410 EYNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKFLR 469
+ + + + RA+GKFELLDR+LPKL +GH+ L+F QMT++M I+E YL+ ++K+LR
Sbjct: 1173 DPSGTNVDLLWRAAGKFELLDRILPKLFLTGHKTLMFFQMTQIMTIMEDYLRSKNWKYLR 1232
Query: 470 LDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQ 529
LDGSTK+++R +LL QFN P S ++F+LSTRAGGLGLNLQTADTVIIFD+DWNP D Q
Sbjct: 1233 LDGSTKSDDRCSLLAQFNDPKSDVYIFMLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQ 1292
Query: 530 AEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRRE 589
A+DRAHRIGQ KEVR+ L++ SIEE IL RA+ K+ +D KVIQAG F+ ST ++R
Sbjct: 1293 AQDRAHRIGQTKEVRILRLITEKSIEENILSRAQYKLDLDGKVIQAGKFDNKSTPEEREA 1352
Query: 590 MLKEIMRR---GTSSLGTDVPSEREINRLAARSDEEFWLFEKMDEERRQKENY-----RS 641
L+ ++ L + E+N L +R+DEE LF+K+D+ER + Y
Sbjct: 1353 FLRSLLEHDGDDDHDLTYGELQDDELNELISRTDEELVLFKKLDKERAATDIYGKGKPLE 1412
Query: 642 RLMEDHEVPEW 652
RL+ +E+P++
Sbjct: 1413 RLLTVNELPDF 1423
>sp|Q6EVK6|BRM_ARATH ATP-dependent helicase BRM OS=Arabidopsis thaliana GN=BRM PE=1 SV=1
Length = 2193
Score = 499 bits (1285), Expect = e-140, Method: Compositional matrix adjust.
Identities = 277/618 (44%), Positives = 383/618 (61%), Gaps = 63/618 (10%)
Query: 91 QYNSAIHSIEEKVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQT 150
+Y + H++ E V QP++LQ G LR YQL GLQWMLSL+NN LNGILADEMGLGKT+Q
Sbjct: 957 KYYTLAHAVNEVVVRQPSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQV 1016
Query: 151 IALIAYLLENKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDER-KAMREEF 209
+ALIAYL+E KG GPH+I+ P AVL NW +E TW PS++ + Y G D+R K +E
Sbjct: 1017 MALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLFSQEV 1076
Query: 210 FSERGRFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRL 269
+ + FNVL+T Y+ IM DR L KV W Y+I+DE R+K+ E LA+ + Y+ QRRL
Sbjct: 1077 CAMK--FNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRL 1134
Query: 270 LLTGTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVA------LTDEEQL 323
LLTGTP+QN L+ELWSLLN LLP +F++ + F +WF PF+ G L E+++
Sbjct: 1135 LLTGTPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKV 1194
Query: 324 LIIRRLHHVIRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTG 383
++I RLH ++ PF+LRR+ ++VE LP K V+L+C MSA Q Y + G + +D
Sbjct: 1195 IVIHRLHQILEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVDPD 1254
Query: 384 TGK-------------SKSLQNLSMQLRKCCNHPYLFVGEYNMWRKEEIIRASGKFELLD 430
K ++L N M+LRK CNHP L +N + K+ ++R+ GK +LD
Sbjct: 1255 DEKLRAQKNPIYQAKIYRTLNNRCMELRKACNHPLLNYPYFNDFSKDFLVRSCGKLWILD 1314
Query: 431 RLLPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPD 490
R+L KL+++GHRVLLFS MT+L+DILE YL+ + R+DG+T E+R + + FN PD
Sbjct: 1315 RILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPD 1374
Query: 491 SPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVS 550
+ F+FLLS RA G GLNLQTADTV+I+D D NP+ ++QA RAHRIGQ +EV+V + +
Sbjct: 1375 TDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKVIYMEA 1434
Query: 551 V--------------------------------GSIEEVILERAKQ-KMGIDAKVIQAGL 577
V GSIE +I +Q K+ + +VI AG
Sbjct: 1435 VVEKLSSHQKEDELRSGGSVDLEDDMAGKDRYIGSIEGLIRNNIQQYKIDMADEVINAGR 1494
Query: 578 FNTTSTAQDRREMLKEIMRRGTSSLGT--DVPSEREINRLAARSDEEFWLFEKMDEERRQ 635
F+ +T ++RR L+ ++ T DVPS E+NR+ ARS+EE LF++MDEE
Sbjct: 1495 FDQRTTHEERRMTLETLLHDEERYQETVHDVPSLHEVNRMIARSEEEVELFDQMDEEFDW 1554
Query: 636 KENYRSRLMEDHE-VPEW 652
E M +HE VP+W
Sbjct: 1555 TEE-----MTNHEQVPKW 1567
>sp|Q24368|ISWI_DROME Chromatin-remodeling complex ATPase chain Iswi OS=Drosophila
melanogaster GN=Iswi PE=1 SV=1
Length = 1027
Score = 480 bits (1236), Expect = e-134, Method: Compositional matrix adjust.
Identities = 245/515 (47%), Positives = 339/515 (65%), Gaps = 26/515 (5%)
Query: 107 PTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGP 166
P ++ GE+R YQ+ GL WM+SL+ N +NGILADEMGLGKT+QTI+L+ YL K GP
Sbjct: 120 PAYIKSGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGP 179
Query: 167 HVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLITHYDLI 226
H+++ PK+ L NW+NEF W PS+ AV G D R + G ++V +T Y++
Sbjct: 180 HIVIVPKSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDVLMP-GEWDVCVTSYEMC 238
Query: 227 MRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQELWSL 286
+R++ KK W Y+++DE HR+KN + L++ + ++ RLL+TGTP+QN+L ELW+L
Sbjct: 239 IREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILREFKTANRLLITGTPLQNNLHELWAL 298
Query: 287 LNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKDEVE 346
LNFLLP +FNS E+F+EWFN L D+ +I RLH V++PF+LRR K EVE
Sbjct: 299 LNFLLPDVFNSSEDFDEWFNT------NTCLGDDA---LITRLHAVLKPFLLRRLKAEVE 349
Query: 347 KYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKS--LQNLSMQLRKCCNHP 404
K L K ++ + +S Q+ +Y +V + + + G GK + LQN+ MQLRKC NHP
Sbjct: 350 KRLKPKKEMKIFVGLSKMQRDWYTKVL-LKDIDVVNGAGKVEKMRLQNILMQLRKCTNHP 408
Query: 405 YLFVGE-----YNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILEIY 459
YLF G Y ++ SGK +LD+LLPKL++ G RVL+FSQMTR++DILE Y
Sbjct: 409 YLFDGAEPGPPYTT--DTHLVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDY 466
Query: 460 LKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFD 519
++ + RLDG T E+R +++FN +S F+F+LSTRAGGLG+NL TAD VII+D
Sbjct: 467 CHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAGGLGINLATADVVIIYD 526
Query: 520 SDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAG-LF 578
SDWNPQMD QA DRAHRIGQKK+VRVF L++ ++EE I+ERA+ K+ +D VIQ G L
Sbjct: 527 SDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGRLV 586
Query: 579 NTTSTAQDRREMLKEIMRRGT----SSLGTDVPSE 609
+ S ++ EML I+R G SS TD+ E
Sbjct: 587 DNRSNQLNKDEMLN-IIRFGANQVFSSKETDITDE 620
>sp|Q8RWY3|ISW2_ARATH Putative chromatin-remodeling complex ATPase chain OS=Arabidopsis
thaliana GN=At3g06400 PE=2 SV=3
Length = 1055
Score = 478 bits (1231), Expect = e-134, Method: Compositional matrix adjust.
Identities = 250/529 (47%), Positives = 363/529 (68%), Gaps = 26/529 (4%)
Query: 102 KVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENK 161
++ QP+ +QG ++R YQL GL W++ L+ N +NGILADEMGLGKT+QTI+L+AYL E +
Sbjct: 177 RLLTQPSCIQG-KMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYR 235
Query: 162 GVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLIT 221
G+ GPH++VAPK+ L NW+NE + P + AV + G P+ER+ +RE+ G+F++ +T
Sbjct: 236 GINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVA-GKFDICVT 294
Query: 222 HYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQ 281
+++ ++++ L++ W Y+I+DE HR+KN L+KT+ + RLL+TGTP+QN+L
Sbjct: 295 SFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLH 354
Query: 282 ELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRK 341
ELW+LLNFLLP IF+S E F+EWF Q++ +++Q ++++LH V+RPF+LRR
Sbjct: 355 ELWALLNFLLPEIFSSAETFDEWF--------QISGENDQQE-VVQQLHKVLRPFLLRRL 405
Query: 342 KDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKSLQNLSMQLRKCC 401
K +VEK LP K + ILK MS QK YY+ + ++ G G+ K L N++MQLRKCC
Sbjct: 406 KSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVNAG-GERKRLLNIAMQLRKCC 464
Query: 402 NHPYLFVGE-----YNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDIL 456
NHPYLF G Y + +I +GK LLD+LLPKL++ RVL+FSQMTRL+DIL
Sbjct: 465 NHPYLFQGAEPGPPYTT--GDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDIL 522
Query: 457 EIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVI 516
E YL + + R+DG+T +ER ++ +N P S F+FLLSTRAGGLG+NL TAD VI
Sbjct: 523 EDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVI 582
Query: 517 IFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAG 576
++DSDWNPQ+D QA+DRAHRIGQKKEV+VF + +IEE ++ERA +K+ +DA VIQ G
Sbjct: 583 LYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQQG 642
Query: 577 LFNTTSTAQDRREMLKEIMRRGT----SSLGTDVPSEREINRLAARSDE 621
T ++ L +++R G SS + + E +I+R+ A+ +E
Sbjct: 643 RLAEQKTVN--KDELLQMVRYGAEMVFSSKDSTITDE-DIDRIIAKGEE 688
>sp|Q7G8Y3|ISW2_ORYSJ Probable chromatin-remodeling complex ATPase chain OS=Oryza sativa
subsp. japonica GN=Os01g0367900 PE=2 SV=2
Length = 1107
Score = 477 bits (1228), Expect = e-133, Method: Compositional matrix adjust.
Identities = 253/529 (47%), Positives = 360/529 (68%), Gaps = 26/529 (4%)
Query: 102 KVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENK 161
++ QP+ ++G ++R YQL GL W++ L+ N +NGILADEMGLGKT+QTI+L+ YL E +
Sbjct: 219 RLLSQPSCIKG-KMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFR 277
Query: 162 GVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLIT 221
G+TGPH++VAPK+ L NWI E + P + AV + G P+ER +RE + G+F+V +T
Sbjct: 278 GITGPHMVVAPKSTLGNWIKEIQRFCPILRAVKFLGNPEERNHIRENLL-QPGKFDVCVT 336
Query: 222 HYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQ 281
+++ ++++ LK+ W Y+I+DE HR+KN L+KT+ Y RLL+TGTP+QN+L
Sbjct: 337 SFEMAIKEKTTLKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLH 396
Query: 282 ELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRK 341
ELWSLLNFLLP IF+S E F+EWF Q++ +++Q ++++LH V+RPF+LRR
Sbjct: 397 ELWSLLNFLLPEIFSSAETFDEWF--------QISGENDQQE-VVQQLHKVLRPFLLRRL 447
Query: 342 KDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKSLQNLSMQLRKCC 401
K +VEK LP K + ILK MS QK YY+ + ++ G G+ K L N++MQLRKCC
Sbjct: 448 KSDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVINAG-GERKRLLNIAMQLRKCC 506
Query: 402 NHPYLFVGE-----YNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDIL 456
NHPYLF G Y E ++ +GK LLD+LLPKL+ RVL+FSQMTRL+DIL
Sbjct: 507 NHPYLFQGAEPGPPYTT--GEHLVENAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDIL 564
Query: 457 EIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVI 516
E YL +++ R+DG+T E+R ++ FN P S F+FLLSTRAGGLG+NL TAD V+
Sbjct: 565 EDYLMYRGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLATADVVV 624
Query: 517 IFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAG 576
++DSDWNPQ D QA+DRAHRIGQKKEV+VF + +IEE ++ERA +K+ +DA VIQ G
Sbjct: 625 LYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQG 684
Query: 577 LFNTTSTAQDRREMLKEIMRRGT----SSLGTDVPSEREINRLAARSDE 621
T ++ L +++R G SS + + E +I+R+ A+ +E
Sbjct: 685 RLAEQKTVN--KDDLLQMVRFGAEMVFSSKDSTITDE-DIDRIIAKGEE 730
>sp|Q6PGB8|SMCA1_MOUSE Probable global transcription activator SNF2L1 OS=Mus musculus
GN=Smarca1 PE=1 SV=1
Length = 1046
Score = 471 bits (1213), Expect = e-132, Method: Compositional matrix adjust.
Identities = 233/505 (46%), Positives = 343/505 (67%), Gaps = 24/505 (4%)
Query: 107 PTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGP 166
P+ ++GG LR YQ+ GL W++SL+ N +NGILADEMGLGKT+QTIAL+ YL + + GP
Sbjct: 179 PSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGP 238
Query: 167 HVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKA-MREEFFSERGRFNVLITHYDL 225
H+++ PK+ L NW+NEF W PS+ + + G D R A +R+E G ++V +T Y++
Sbjct: 239 HMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIRDEMMP--GEWDVCVTSYEM 296
Query: 226 IMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQELWS 285
+++++ KK W Y+++DE HR+KN + L++ + ++ RLLLTGTP+QN+L ELW+
Sbjct: 297 VIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWA 356
Query: 286 LLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKDEV 345
LLNFLLP +FNS ++F+ WF+ + L D++ ++ RLH V++PF+LRR K +V
Sbjct: 357 LLNFLLPDVFNSADDFDSWFDT------KNCLGDQK---LVERLHAVLKPFLLRRIKTDV 407
Query: 346 EKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKSLQ--NLSMQLRKCCNH 403
EK LP K ++ + +S Q+ +Y ++ + + + +GK ++ N+ MQLRKCCNH
Sbjct: 408 EKSLPPKKEIKIYLGLSKMQREWYTKIL-MKDIDVLNSSGKMDKMRLLNILMQLRKCCNH 466
Query: 404 PYLFVG-----EYNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILEI 458
PYLF G Y E I+ SGK LD+LL ++++ G RVL+FSQMTRL+DILE
Sbjct: 467 PYLFDGAEPGPPYTT--DEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILED 524
Query: 459 YLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIF 518
Y +++ RLDG T EER + FNAP+S F+F+LSTRAGGLG+NL +AD VI++
Sbjct: 525 YCMWRGYEYSRLDGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINLASADVVILY 584
Query: 519 DSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAG-L 577
DSDWNPQ+D QA DRAHRIGQKK VRVF L++ ++EE I+ERA+ K+ +D+ VIQ G L
Sbjct: 585 DSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRL 644
Query: 578 FNTTSTAQDRREMLKEIMRRGTSSL 602
+ S + EML +++R G + +
Sbjct: 645 IDQQSNKLAKEEML-QMIRHGATHV 668
>sp|P28370|SMCA1_HUMAN Probable global transcription activator SNF2L1 OS=Homo sapiens
GN=SMARCA1 PE=1 SV=2
Length = 1054
Score = 468 bits (1204), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/524 (45%), Positives = 347/524 (66%), Gaps = 36/524 (6%)
Query: 107 PTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGP 166
P+ ++GG LR YQ+ GL W++SL+ N +NGILADEMGLGKT+QTIAL+ YL + + GP
Sbjct: 175 PSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGP 234
Query: 167 HVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKA-MREEFFSERGRFNVLITHYDL 225
H+++ PK+ L NW+NEF W PS+ + + G D R A +R+E G ++V +T Y++
Sbjct: 235 HMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMP--GEWDVCVTSYEM 292
Query: 226 IMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQELWS 285
+++++ KK W Y+++DE HR+KN + L++ + ++ RLLLTGTP+QN+L ELW+
Sbjct: 293 VIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWA 352
Query: 286 LLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKDEV 345
LLNFLLP +FNS ++F+ WF+ + L D++ ++ RLH V++PF+LRR K +V
Sbjct: 353 LLNFLLPDVFNSADDFDSWFDT------KNCLGDQK---LVERLHAVLKPFLLRRIKTDV 403
Query: 346 EKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKSLQ--NLSMQLRKCCNH 403
EK LP K ++ + +S Q+ +Y ++ + + + +GK ++ N+ MQLRKCCNH
Sbjct: 404 EKSLPPKKEIKIYLGLSKMQREWYTKIL-MKDIDVLNSSGKMDKMRLLNILMQLRKCCNH 462
Query: 404 PYLFVG-----EYNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILEI 458
PYLF G Y E I+ SGK +LD+LL KL++ G RVL+FSQMTRL+DILE
Sbjct: 463 PYLFDGAEPGPPYTT--DEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILED 520
Query: 459 YLKLNDFKFLRLDGSTKTEERG------------TLLKQFNAPDSPYFMFLLSTRAGGLG 506
Y +++ RLDG T EER ++ FNAP+S F+F+LSTRAGGLG
Sbjct: 521 YCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLG 580
Query: 507 LNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKM 566
+NL +AD VI++DSDWNPQ+D QA DRAHRIGQKK VRVF L++ ++EE I+ERA+ K+
Sbjct: 581 INLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKL 640
Query: 567 GIDAKVIQAG-LFNTTSTAQDRREMLKEIMRRGTSSLGTDVPSE 609
+D+ VIQ G L + S + EML +++R G + + SE
Sbjct: 641 RLDSIVIQQGRLIDQQSNKLAKEEML-QMIRHGATHVFASKESE 683
>sp|Q08773|ISW2_YEAST ISWI chromatin-remodeling complex ATPase ISW2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ISW2 PE=1
SV=1
Length = 1120
Score = 468 bits (1203), Expect = e-130, Method: Compositional matrix adjust.
Identities = 235/508 (46%), Positives = 340/508 (66%), Gaps = 19/508 (3%)
Query: 103 VTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKG 162
V+E P+ ++ G+LR YQ++GL W++SL N L+GILADEMGLGKT+QTI+ + YL K
Sbjct: 172 VSESPSFVKSGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQ 231
Query: 163 VTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLITH 222
+ GP +I+ PK+ L NW EF W P++ +V G D R + E RF+VLIT
Sbjct: 232 IEGPFLIIVPKSTLDNWRREFLKWTPNVNVLVLHGDKDTRADIVRNIILE-ARFDVLITS 290
Query: 223 YDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQE 282
Y++++R++ LK++ W Y+++DE HR+KN + AL++ I + + RLL+TGTP+QN+L E
Sbjct: 291 YEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQNNLHE 350
Query: 283 LWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKK 342
LW+LLNFLLP IF E F+EWF + ++++Q ++I++LH V+ PF+LRR K
Sbjct: 351 LWALLNFLLPDIFGDSELFDEWF--------EQNNSEQDQEIVIQQLHSVLNPFLLRRVK 402
Query: 343 DEVEKYLPGKSQVILKCDMSAWQKVYYQQV--TDVGRVGLDTGTGKSKS-LQNLSMQLRK 399
+VEK L K + + M+ Q +Y+ + D+ V G + K+ L N+ MQLRK
Sbjct: 403 ADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRK 462
Query: 400 CCNHPYLFVGE-----YNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMD 454
CCNHPYLF G Y E +I SGK +LD+LL +L++ G RVL+FSQM+RL+D
Sbjct: 463 CCNHPYLFEGAEPGPPYTT--DEHLIFNSGKMIILDKLLKRLKEKGSRVLIFSQMSRLLD 520
Query: 455 ILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADT 514
ILE Y DF++ R+DGST EER + ++N P+S F+FLL+TRAGGLG+NL TADT
Sbjct: 521 ILEDYCYFRDFEYCRIDGSTSHEERIEAIDEYNKPNSEKFVFLLTTRAGGLGINLVTADT 580
Query: 515 VIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQ 574
VI+FDSDWNPQ D QA DRAHRIGQKK+V V+ V+ +IEE ++ERA QK+ +D VIQ
Sbjct: 581 VILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLVIQ 640
Query: 575 AGLFNTTSTAQDRREMLKEIMRRGTSSL 602
G T++ + ++ L ++++ G ++
Sbjct: 641 QGTGKKTASLGNSKDDLLDMIQFGAKNM 668
>sp|O60264|SMCA5_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Homo sapiens
GN=SMARCA5 PE=1 SV=1
Length = 1052
Score = 457 bits (1177), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/525 (43%), Positives = 345/525 (65%), Gaps = 22/525 (4%)
Query: 93 NSAIHSIEEKVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIA 152
+S ++ + + P+ ++ G+LR YQ+ GL W++SL+ N +NGILADEMGLGKT+QTI+
Sbjct: 158 SSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTIS 217
Query: 153 LIAYLLENKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSE 212
L+ Y+ + + GPH+++ PK+ L NW++EF W P++ +V G ++R A +
Sbjct: 218 LLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLP 277
Query: 213 RGRFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLT 272
G ++V +T Y+++++++ KK W Y+++DE HR+KN + L++ + ++ RLLLT
Sbjct: 278 -GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLT 336
Query: 273 GTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHV 332
GTP+QN+L ELWSLLNFLLP +FNS ++F+ WF+ L D++ ++ RLH V
Sbjct: 337 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDT------NNCLGDQK---LVERLHMV 387
Query: 333 IRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKSLQ- 391
+RPF+LRR K +VEK LP K +V + +S Q+ +Y ++ + + + GK ++
Sbjct: 388 LRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRIL-MKDIDILNSAGKMDKMRL 446
Query: 392 -NLSMQLRKCCNHPYLFVG-----EYNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLL 445
N+ MQLRKCCNHPYLF G Y ++ SGK +LD+LLPKL++ G RVL+
Sbjct: 447 LNILMQLRKCCNHPYLFDGAEPGPPYTT--DMHLVTNSGKMVVLDKLLPKLKEQGSRVLI 504
Query: 446 FSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGL 505
FSQMTR++DILE Y ++++ RLDG T +ER + +N P+S F+F+LSTRAGGL
Sbjct: 505 FSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGL 564
Query: 506 GLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQK 565
G+NL TAD VI++DSDWNPQ+D QA DRAHRIGQ K VRVF ++ ++EE I+ERA+ K
Sbjct: 565 GINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMK 624
Query: 566 MGIDAKVIQAG-LFNTTSTAQDRREMLKEIMRRGTSSLGTDVPSE 609
+ +D+ VIQ G L + + EML +++R G + + SE
Sbjct: 625 LRLDSIVIQQGRLVDQNLNKIGKDEML-QMIRHGATHVFASKESE 668
>sp|Q91ZW3|SMCA5_MOUSE SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Mus musculus
GN=Smarca5 PE=1 SV=1
Length = 1051
Score = 457 bits (1176), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/525 (43%), Positives = 345/525 (65%), Gaps = 22/525 (4%)
Query: 93 NSAIHSIEEKVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIA 152
+S ++ + + P+ ++ G+LR YQ+ GL W++SL+ N +NGILADEMGLGKT+QTI+
Sbjct: 157 SSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTIS 216
Query: 153 LIAYLLENKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSE 212
L+ Y+ + + GPH+++ PK+ L NW++EF W P++ +V G ++R A +
Sbjct: 217 LLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKKWVPTLRSVCLIGDKEQRAAFVRDVLLP 276
Query: 213 RGRFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLT 272
G ++V +T Y+++++++ KK W Y+++DE HR+KN + L++ + ++ RLLLT
Sbjct: 277 -GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLT 335
Query: 273 GTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHV 332
GTP+QN+L ELWSLLNFLLP +FNS ++F+ WF+ L D++ ++ RLH V
Sbjct: 336 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDT------NNCLGDQK---LVERLHMV 386
Query: 333 IRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKSLQ- 391
+RPF+LRR K +VEK LP K +V + +S Q+ +Y ++ + + + GK ++
Sbjct: 387 LRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRIL-MKDIDILNSAGKMDKMRL 445
Query: 392 -NLSMQLRKCCNHPYLFVG-----EYNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLL 445
N+ MQLRKCCNHPYLF G Y ++ SGK +LD+LLPKL++ G RVL+
Sbjct: 446 LNILMQLRKCCNHPYLFDGAEPGPPYTT--DMHLVTNSGKMVVLDKLLPKLKEQGSRVLI 503
Query: 446 FSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGL 505
FSQMTR++DILE Y ++++ RLDG T +ER + +N P+S F+F+LSTRAGGL
Sbjct: 504 FSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGL 563
Query: 506 GLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQK 565
G+NL TAD VI++DSDWNPQ+D QA DRAHRIGQ K VRVF ++ ++EE I+ERA+ K
Sbjct: 564 GINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMK 623
Query: 566 MGIDAKVIQAG-LFNTTSTAQDRREMLKEIMRRGTSSLGTDVPSE 609
+ +D+ VIQ G L + + EML +++R G + + SE
Sbjct: 624 LRLDSIVIQQGRLVDQNLNKIGKDEML-QMIRHGATHVFASKESE 667
>sp|P41877|ISW1_CAEEL Chromatin-remodeling complex ATPase chain isw-1 OS=Caenorhabditis
elegans GN=isw-1 PE=1 SV=2
Length = 1009
Score = 447 bits (1150), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/553 (42%), Positives = 348/553 (62%), Gaps = 24/553 (4%)
Query: 61 GTPRDL----HPEEDDIIDSDHNDDSGDLLEGQRQYNSAIHSIEEKVTEQ-PTLLQGGEL 115
G P D P + + ID DH + E + AI S + + ++ P ++ GE+
Sbjct: 73 GAPVDTKKRGRPSKKNGIDGDHRHRKTEQEEDEEMVADAIKSDDLVIFDKSPFYIENGEM 132
Query: 116 RAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVAPKAV 175
R YQ+ GL W+ SL +N +NGILADEMGLGKT+QTI++I Y+ K PH+++ PK+
Sbjct: 133 RDYQVRGLNWLASLQHNKINGILADEMGLGKTLQTISMIGYMKHYKNKASPHLVIVPKST 192
Query: 176 LPNWINEFSTWAPSIAAVVYDGRPDER-KAMREEFFSERGRFNVLITHYDLIMRDRQYLK 234
L NW NEF W PSI AVV G R + +R+ ++ F+V T Y+++++ + LK
Sbjct: 193 LQNWANEFKKWCPSINAVVLIGDEAARNQVLRDVILPQK--FDVCCTTYEMMLKVKTQLK 250
Query: 235 KVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQELWSLLNFLLPTI 294
K+ W Y+I+DE HR+KN + L++T+ + RLL+TGTP+QN+L ELW+LLNFLLP I
Sbjct: 251 KLNWRYIIIDEAHRIKNEKSKLSETVRELNSENRLLITGTPLQNNLHELWALLNFLLPDI 310
Query: 295 FNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKDEVEKYLPGKSQ 354
F S ++F+ WF+ + TD +++RLH V++PF+LRR K +VEK L K +
Sbjct: 311 FTSSDDFDSWFS----NDAMSGNTD-----LVQRLHKVLQPFLLRRIKSDVEKSLLPKKE 361
Query: 355 VILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKS--LQNLSMQLRKCCNHPYLFVGEYN 412
V + +S Q+ +Y +V + + + G GK + L N+ M LRKC NHPYLF G
Sbjct: 362 VKVYVGLSKMQREWYTKVL-MKDIDIINGAGKVEKARLMNILMHLRKCVNHPYLFDGAEP 420
Query: 413 ---MWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKFLR 469
+ ++ SGK +LD+LL K ++ G RVL+FSQ +R++D+LE + +++ R
Sbjct: 421 GPPFTTDQHLVDNSGKMVVLDKLLMKFKEQGSRVLIFSQFSRMLDLLEDFCWWRHYEYCR 480
Query: 470 LDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQ 529
LDGST E+R ++ +NAPDS F+F+L+TRAGGLG+NL TAD VII+DSDWNPQ D Q
Sbjct: 481 LDGSTPHEDRSNAIEAYNAPDSKKFIFMLTTRAGGLGINLATADVVIIYDSDWNPQSDLQ 540
Query: 530 AEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRRE 589
A DRAHRIGQKK+VRVF L++ +++E I+E+A+ K+ +D VIQ G + + +
Sbjct: 541 AMDRAHRIGQKKQVRVFRLITENTVDERIIEKAEAKLRLDNIVIQQGRMSEAQKTLGKGD 600
Query: 590 MLKEIMRRGTSSL 602
M+ ++R G +
Sbjct: 601 MI-SMIRHGAEQV 612
>sp|P38144|ISW1_YEAST ISWI chromatin-remodeling complex ATPase ISW1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ISW1 PE=1
SV=2
Length = 1129
Score = 438 bits (1127), Expect = e-122, Method: Compositional matrix adjust.
Identities = 233/518 (44%), Positives = 347/518 (66%), Gaps = 28/518 (5%)
Query: 98 SIEEKVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYL 157
SIE + E P + G+LR YQ++G+ W++SL N + GILADEMGLGKT+QTI+ + YL
Sbjct: 180 SIEFQFRESPAYV-NGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYL 238
Query: 158 LENKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFN 217
+ + GP +++APK+ L NW+ E + W P + A + G +ER + ++ F+
Sbjct: 239 RYIEKIPGPFLVIAPKSTLNNWLREINRWTPDVNAFILQGDKEERAELIQKKLL-GCDFD 297
Query: 218 VLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQ 277
V+I Y++I+R++ LKK+ W Y+I+DE HR+KN E L++ + + + RLL+TGTP+Q
Sbjct: 298 VVIASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRNRLLITGTPLQ 357
Query: 278 NSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFI 337
N+L ELW+LLNFLLP IF+ ++F++WF++ T+E+Q I+++LH V++PF+
Sbjct: 358 NNLHELWALLNFLLPDIFSDAQDFDDWFSS--------ESTEEDQDKIVKQLHTVLQPFL 409
Query: 338 LRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQV--TDVGRVGLDTGTGKSKS-LQNLS 394
LRR K +VE L K ++ L MS+ QK +Y+++ D+ V G+ +SK+ L N+
Sbjct: 410 LRRIKSDVETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAVNGSNGSKESKTRLLNIM 469
Query: 395 MQLRKCCNHPYLFVGE-----YNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQM 449
MQLRKCCNHPYLF G Y E ++ + K ++LD+LL KL++ G RVL+FSQM
Sbjct: 470 MQLRKCCNHPYLFDGAEPGPPYTT--DEHLVYNAAKLQVLDKLLKKLKEEGSRVLIFSQM 527
Query: 450 TRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNL 509
+RL+DILE Y ++++ R+DGST E+R + +NAPDS F+FLL+TRAGGLG+NL
Sbjct: 528 SRLLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGLGINL 587
Query: 510 QTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGID 569
+AD V+++DSDWNPQ D QA DRAHRIGQKK+V+VF LV+ S+EE ILERA QK+ +D
Sbjct: 588 TSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLD 647
Query: 570 AKVIQAGLFNTTSTAQ-----DRREMLKEIMRRGTSSL 602
VIQ N TS + D ++ L +++ G + +
Sbjct: 648 QLVIQQ---NRTSLKKKENKADSKDALLSMIQHGAADV 682
>sp|P32657|CHD1_YEAST Chromo domain-containing protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CHD1 PE=1 SV=1
Length = 1468
Score = 438 bits (1126), Expect = e-121, Method: Compositional matrix adjust.
Identities = 233/540 (43%), Positives = 340/540 (62%), Gaps = 37/540 (6%)
Query: 101 EKVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLEN 160
EK++ QP ++GGELR +QL G+ WM L++ NGILADEMGLGKT+QT+A I++L+
Sbjct: 362 EKLSVQPPFIKGGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFA 421
Query: 161 KGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMRE-EFFSE---RGR- 215
+ GPH+IV P + +P W++ F WAP + + Y G R +RE EF++ +G+
Sbjct: 422 RRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFYTNPRAKGKK 481
Query: 216 ---FNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLT 272
FNVL+T Y+ I++DR L ++W +M VDE HRLKN E +L ++++ +++ R+L+T
Sbjct: 482 TMKFNVLLTTYEYILKDRAELGSIKWQFMAVDEAHRLKNAESSLYESLNSFKVANRMLIT 541
Query: 273 GTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHV 332
GTP+QN+++EL +L+NFL+P F + + F+++ DEEQ I LH
Sbjct: 542 GTPLQNNIKELAALVNFLMPGRFTIDQEID------FENQ------DEEQEEYIHDLHRR 589
Query: 333 IRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-GKSKSLQ 391
I+PFILRR K +VEK LP K++ IL+ ++S Q YY+ + L G G SL
Sbjct: 590 IQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTAGAKGGHFSLL 649
Query: 392 NLSMQLRKCCNHPYLF----------VGEYNMWRKE---EIIRASGKFELLDRLLPKLRK 438
N+ +L+K NHPYLF G+ M R+ +I +SGK LLD+LL +L+K
Sbjct: 650 NIMNELKKASNHPYLFDNAEERVLQKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKK 709
Query: 439 SGHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLL 498
GHRVL+FSQM R++DIL YL + F RLDG+ + +R + FN+PDS F+FLL
Sbjct: 710 DGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPDSNDFVFLL 769
Query: 499 STRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVI 558
STRAGGLG+NL TADTV+IFDSDWNPQ D QA RAHRIGQK V V+ LVS ++EE +
Sbjct: 770 STRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEV 829
Query: 559 LERAKQKMGIDAKVIQAGLFN---TTSTAQDRREMLKEIMRRGTSSLGTDVPSEREINRL 615
LERA++KM ++ +I G+ + T + L I++ G ++ T +++++ L
Sbjct: 830 LERARKKMILEYAIISLGVTDGNKYTKKNEPNAGELSAILKFGAGNMFTATDNQKKLEDL 889
>sp|O14647|CHD2_HUMAN Chromodomain-helicase-DNA-binding protein 2 OS=Homo sapiens GN=CHD2
PE=1 SV=2
Length = 1828
Score = 434 bits (1115), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/485 (48%), Positives = 310/485 (63%), Gaps = 26/485 (5%)
Query: 103 VTEQPTLLQGG--ELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLEN 160
+ +QP L G ELR YQLEGL W+ + N + ILADEMGLGKTIQTI+ ++YL
Sbjct: 470 LKKQPAYLGGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQ 529
Query: 161 KGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFF----SERGRF 216
+ GP +IV P + L +W EF WAP I VVY G R +RE + ++R +F
Sbjct: 530 HQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKF 589
Query: 217 NVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPI 276
N LIT Y+++++D+ L + W ++ VDE HRLKN + L KT+ ++ RLL+TGTP+
Sbjct: 590 NALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPL 649
Query: 277 QNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPF 336
QNSL+ELWSLL+F++P F E+FEE D G+ + LH V+ PF
Sbjct: 650 QNSLKELWSLLHFIMPEKFEFWEDFEE-------DHGKGRENG------YQSLHKVLEPF 696
Query: 337 ILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-GKSKSLQNLSM 395
+LRR K +VEK LP K + IL+ +MSA QK YY+ + L GT G + N+ M
Sbjct: 697 LLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVM 756
Query: 396 QLRKCCNHPYLFVGEYNMWRKE------EIIRASGKFELLDRLLPKLRKSGHRVLLFSQM 449
+L+KCCNH YL R+ +IR+SGK LLD+LL +LR+ G+RVL+FSQM
Sbjct: 757 ELKKCCNHCYLIKPPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQM 816
Query: 450 TRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNL 509
R++DIL YL + + F RLDGS K E R L FNA S F FLLSTRAGGLG+NL
Sbjct: 817 VRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINL 876
Query: 510 QTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGID 569
+ADTV+IFDSDWNPQ D QA+ RAHRIGQKK+V ++ LV+ G++EE I+ERAK+KM +D
Sbjct: 877 ASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLD 936
Query: 570 AKVIQ 574
VIQ
Sbjct: 937 HLVIQ 941
>sp|Q9US25|HRP1_SCHPO Chromodomain helicase hrp1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=hrp1 PE=1 SV=1
Length = 1373
Score = 433 bits (1113), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/521 (43%), Positives = 331/521 (63%), Gaps = 32/521 (6%)
Query: 102 KVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENK 161
K+ +QP+ ++GGE+R +QL G+ WM L++ N NGILADEMGLGKT+QT+ ++YL+ +
Sbjct: 377 KLEKQPSYIKGGEIRDFQLTGINWMAYLWHRNENGILADEMGLGKTVQTVCFLSYLVHSL 436
Query: 162 GVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMRE-EFF----SERGRF 216
GP +IV P + +P W + W P + ++ Y G + R +RE EF+ S + +F
Sbjct: 437 KQHGPFLIVVPLSTVPAWQETLANWTPDLNSICYTGNTESRANIREYEFYLSTNSRKLKF 496
Query: 217 NVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPI 276
N+L+T Y+ I++D+Q L ++W Y+ +DE HRLKN E +L +T+S ++ RLL+TGTP+
Sbjct: 497 NILLTTYEYILKDKQELNNIRWQYLAIDEAHRLKNSESSLYETLSQFRTANRLLITGTPL 556
Query: 277 QNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPF 336
QN+L+EL SL+NFL+P F + F+ P + EQ IR L ++PF
Sbjct: 557 QNNLKELASLVNFLMPGKFYIRDELN--FDQP----------NAEQERDIRDLQERLQPF 604
Query: 337 ILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-GKSK-SLQNLS 394
ILRR K +VEK LP KS+ IL+ ++S Q +Y+ + L T G+ + SL N+
Sbjct: 605 ILRRLKKDVEKSLPSKSERILRVELSDMQTEWYKNILTKNYRALTGHTDGRGQLSLLNIV 664
Query: 395 MQLRKCCNHPYLFVGEYNMW------RKEEIIRA----SGKFELLDRLLPKLRKSGHRVL 444
++L+K NHPYLF G W +E+ +R SGK LLD+LL +L+ GHRVL
Sbjct: 665 VELKKVSNHPYLFPGAAEKWMMGRKMTREDTLRGIIMNSGKMVLLDKLLQRLKHDGHRVL 724
Query: 445 LFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGG 504
+FSQM R+++IL Y+ L + + RLDG+ R + FNAPDSP F+FLLSTRAGG
Sbjct: 725 IFSQMVRMLNILGEYMSLRGYNYQRLDGTIPASVRRVSIDHFNAPDSPDFVFLLSTRAGG 784
Query: 505 LGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQ 564
LG+NL TADTVIIFDSDWNPQ D QA RAHRIGQK V V+ +S ++EE ILERA++
Sbjct: 785 LGINLNTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVNVYRFLSKDTVEEDILERARR 844
Query: 565 KMGIDAKVIQAGLFNTTSTAQDRR---EMLKEIMRRGTSSL 602
KM ++ +I G+ + +++ + + L I++ G S++
Sbjct: 845 KMILEYAIISLGVTEKSKNSKNDKYDAQELSAILKFGASNM 885
>sp|O14139|HRP3_SCHPO Chromodomain helicase hrp3 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=hrp3 PE=1 SV=1
Length = 1388
Score = 428 bits (1101), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/522 (43%), Positives = 332/522 (63%), Gaps = 33/522 (6%)
Query: 102 KVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENK 161
K+ +QP+ + GGELR +QL G+ WM L++ N NGILADEMGLGKT+QT+A ++YL +
Sbjct: 362 KLEQQPSYITGGELRDFQLTGVNWMAYLWHKNENGILADEMGLGKTVQTVAFLSYLAHSL 421
Query: 162 GVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMRE-EFF---SERGRFN 217
GP ++V P + +P W + WA + + Y G R+ +R+ EF+ +++ +FN
Sbjct: 422 RQHGPFLVVVPLSTVPAWQETLALWASDMNCISYLGNTTSRQVIRDYEFYVDGTQKIKFN 481
Query: 218 VLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQ 277
+L+T Y+ +++DR L ++W YM +DE HRLKN E +L + +S ++ RLL+TGTP+Q
Sbjct: 482 LLLTTYEYVLKDRSVLSNIKWQYMAIDEAHRLKNSESSLYEALSQFKNSNRLLITGTPLQ 541
Query: 278 NSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFI 337
N+++EL +L++FL+P F E AP DEEQ IR L ++P+I
Sbjct: 542 NNIRELAALVDFLMPGKFEIREEIN--LEAP----------DEEQEAYIRSLQEHLQPYI 589
Query: 338 LRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQV-TDVGRV-GLDTGTGKSKSLQNLSM 395
LRR K +VEK LP KS+ IL+ ++S Q +Y+ + T RV +G SL N+ +
Sbjct: 590 LRRLKKDVEKSLPSKSERILRVELSDLQMYWYKNILTRNYRVLTQSISSGSQISLLNIVV 649
Query: 396 QLRKCCNHPYLFVGEYNMW--------RKEEIIRA----SGKFELLDRLLPKLRKSGHRV 443
+L+K NHPYLF G W R++E+++ SGK LLD+LL +LR+ GHRV
Sbjct: 650 ELKKASNHPYLFDGVEESWMQKINSQGRRDEVLKGLIMNSGKMVLLDKLLSRLRRDGHRV 709
Query: 444 LLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAG 503
L+FSQM R++DIL YL L + RLDG+ R T + FNAP+SP F+FLLSTRAG
Sbjct: 710 LIFSQMVRMLDILGDYLSLRGYPHQRLDGTVPAAVRRTSIDHFNAPNSPDFVFLLSTRAG 769
Query: 504 GLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAK 563
GLG+NL TADTVIIFDSDWNPQ D QA RAHRIGQK V V+ L+S +IEE +LERA+
Sbjct: 770 GLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLLSKDTIEEDVLERAR 829
Query: 564 QKMGIDAKVIQAGLFNTTSTAQDRR---EMLKEIMRRGTSSL 602
+KM ++ +I G+ + +++ + E L I++ G S++
Sbjct: 830 RKMILEYAIISLGVTDKQKNSKNDKFSAEELSAILKFGASNM 871
>sp|Q9XFH4|DDM1_ARATH ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana GN=DDM1
PE=1 SV=1
Length = 764
Score = 423 bits (1088), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/533 (43%), Positives = 341/533 (63%), Gaps = 23/533 (4%)
Query: 109 LLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHV 168
LL GG+L++YQL+G++W++SL+ N LNGILAD+MGLGKTIQTI +++L N G+ GP++
Sbjct: 196 LLTGGQLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHLKGN-GLDGPYL 254
Query: 169 IVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSER--GRFNVLITHYDLI 226
++AP + L NW NE + + PSI A++Y G ++R +R + + +F ++IT Y++
Sbjct: 255 VIAPLSTLSNWFNEIARFTPSINAIIYHGDKNQRDELRRKHMPKTVGPKFPIVITSYEVA 314
Query: 227 MRD-RQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQELWS 285
M D ++ L+ W Y+++DEGHRLKNH+C L + + ++ +LLLTGTP+QN+L ELWS
Sbjct: 315 MNDAKRILRHYPWKYVVIDEGHRLKNHKCKLLRELKHLKMDNKLLLTGTPLQNNLSELWS 374
Query: 286 LLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQ--LLIIRRLHHVIRPFILRRKKD 343
LLNF+LP IF S + FE WF+ K++ + +EE+ ++ +LH ++RPFILRR K
Sbjct: 375 LLNFILPDIFTSHDEFESWFDFSEKNKNEATKEEEEKRRAQVVSKLHGILRPFILRRMKC 434
Query: 344 EVEKYLPGKSQVILKCDMSAWQKVYYQQVTD---VGRVGLDT--GTGKSKSLQNLSMQLR 398
+VE LP K ++I+ M+ QK + + + + +G + G G L NL +QLR
Sbjct: 435 DVELSLPRKKEIIMYATMTDHQKKFQEHLVNNTLEAHLGENAIRGQGWKGKLNNLVIQLR 494
Query: 399 KCCNHPYLFVGE----YNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMD 454
K CNHP L G+ Y EEI+ GKF LL+RLL +L + H+VL+FSQ T+L+D
Sbjct: 495 KNCNHPDLLQGQIDGSYLYPPVEEIVGQCGKFRLLERLLVRLFANNHKVLIFSQWTKLLD 554
Query: 455 ILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADT 514
I++ Y F+ R+DGS K +ER +K F+ S +FLLSTRAGGLG+NL ADT
Sbjct: 555 IMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSCSIFLLSTRAGGLGINLTAADT 614
Query: 515 VIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQ 574
I++DSDWNPQMD QA DR HRIGQ K V V+ L + SIE +L+RA K+ ++ VI
Sbjct: 615 CILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSIETRVLKRAYSKLKLEHVVIG 674
Query: 575 AGLFN-------TTSTAQDRREMLKEIMRRGTSSLGTDVPSEREINRLAARSD 620
G F+ T +D +LKE + TD+ S+ +++RL RSD
Sbjct: 675 QGQFHQERAKSSTPLEEEDILALLKEDETAEDKLIQTDI-SDADLDRLLDRSD 726
>sp|Q9NRZ9|HELLS_HUMAN Lymphoid-specific helicase OS=Homo sapiens GN=HELLS PE=1 SV=1
Length = 838
Score = 417 bits (1073), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/544 (40%), Positives = 313/544 (57%), Gaps = 74/544 (13%)
Query: 105 EQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVT 164
+QP GG +R YQ+EG++W+ L+ N +NGILADEMGLGKT+Q IA IA +++ +GV
Sbjct: 213 QQPKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIALMIQ-RGVP 271
Query: 165 GPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFN---VLIT 221
GP ++ P + LPNW+ EF + P I ++Y G +ER+ + + +G V+IT
Sbjct: 272 GPFLVCGPLSTLPNWMAEFKRFTPDIPTMLYHGTQEERQKLVRNIYKRKGTLQIHPVVIT 331
Query: 222 HYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQ 281
+++ MRDR L+ W Y+IVDEGHR+KN +C L + + + +LLLTGTP+QN+L
Sbjct: 332 SFEIAMRDRNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLS 391
Query: 282 ELWSLLNFLLPTIFNSVENFEEWFN-APFKDRGQVALTDEEQLLIIRRLHHVIRPFILRR 340
ELWSLLNFLLP +F+ +++FE WF+ + + + E + ++ LH ++ PF+LRR
Sbjct: 392 ELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQNVLHMLHQILTPFLLRR 451
Query: 341 KKDEVEKYLPGKSQVILKCDMSAWQK---------------------------------- 366
K +V +P K +V++ +S Q+
Sbjct: 452 LKSDVALEVPPKREVVVYAPLSKKQEIFYTAIVNRTIANMFGSSEKETIELSPTGRPKRR 511
Query: 367 ----VYYQQVTD---------------------VGRVGLDTGTGKSKSLQNLSMQLRKCC 401
+ Y ++ D V V + + + LQN+ M LRKCC
Sbjct: 512 TRKSINYSKIDDFPNELEKLISQIQPEVDRERAVVEVNIPVESEVNLKLQNIMMLLRKCC 571
Query: 402 NHPYLF-------VGEYNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMD 454
NHPYL E+ + EE++ SGKF +LDR+LP+L+K GH+VLLFSQMT ++D
Sbjct: 572 NHPYLIEYPIDPVTQEFKI--DEELVTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLD 629
Query: 455 ILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADT 514
IL Y L DF F RLDGS ER + FN D F+FL+STRAGGLG+NL ADT
Sbjct: 630 ILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNT-DPEVFIFLVSTRAGGLGINLTAADT 688
Query: 515 VIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQ 574
VII+DSDWNPQ D QA+DR HRIGQ K V V+ LV+ +I++ I+ERA K ++ +I
Sbjct: 689 VIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLIIH 748
Query: 575 AGLF 578
F
Sbjct: 749 KNHF 752
>sp|Q7KU24|CHD1_DROME Chromodomain-helicase-DNA-binding protein 1 OS=Drosophila
melanogaster GN=Chd1 PE=1 SV=1
Length = 1883
Score = 414 bits (1064), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/487 (45%), Positives = 311/487 (63%), Gaps = 28/487 (5%)
Query: 102 KVTEQPTLLQGG-ELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLEN 160
++ QP L G LR YQ++GL W+L + + ILADEMGLGKTIQTI + L +
Sbjct: 514 RIKNQPEFLSSGLTLRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKI 573
Query: 161 KGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFF----SERGRF 216
+ GP + V P + + W EF WAP + V Y G R+ +++ + S+R +F
Sbjct: 574 HHLYGPFLCVVPLSTMTAWQREFDLWAPDMNVVTYLGDIKSRELIQQYEWQFESSKRLKF 633
Query: 217 NVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPI 276
N ++T Y+++++D+Q+L +QW ++VDE HRLKN + L K++ + RLL+TGTP+
Sbjct: 634 NCILTTYEIVLKDKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGTPL 693
Query: 277 QNSLQELWSLLNFLLPTIFNSVENFE-EWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRP 335
QNSL+ELW+LL+F++P F++ ENFE + NA +D+G RLH + P
Sbjct: 694 QNSLKELWALLHFIMPDKFDTWENFEVQHGNA--EDKGYT------------RLHQQLEP 739
Query: 336 FILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-GKSKSLQNLS 394
+ILRR K +VEK LP K + IL+ +M++ QK YY+ + L G G + + N+
Sbjct: 740 YILRRVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNFDALRKGKRGSTSTFLNIV 799
Query: 395 MQLRKCCNHPYLF-VGEYNMWRKEE------IIRASGKFELLDRLLPKLRKSGHRVLLFS 447
++L+KCCNH L E+ + ++ +++ SGK LLD+LL +L+++GHRVL+FS
Sbjct: 800 IELKKCCNHAALIRPSEFELMGLQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFS 859
Query: 448 QMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGL 507
QM R++D+L YL+ F F RLDGS K E R L FNA S F FLLSTRAGGLG+
Sbjct: 860 QMVRMLDVLADYLQKRHFPFQRLDGSIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGI 919
Query: 508 NLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMG 567
NL TADTVIIFDSDWNPQ D QA+ RAHRIGQK +V ++ LV+ S+EE I+ERAKQKM
Sbjct: 920 NLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMV 979
Query: 568 IDAKVIQ 574
+D VIQ
Sbjct: 980 LDHLVIQ 986
>sp|B6ZLK2|CHD1_CHICK Chromodomain-helicase-DNA-binding protein 1 OS=Gallus gallus
GN=CHD1 PE=1 SV=1
Length = 1719
Score = 413 bits (1062), Expect = e-114, Method: Compositional matrix adjust.
Identities = 239/524 (45%), Positives = 328/524 (62%), Gaps = 37/524 (7%)
Query: 103 VTEQPTLLQGGE---LRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLE 159
+ +QP+ + G E LR YQL GL W+ + + ILADEMGLGKTIQTI+ + YL
Sbjct: 462 LKKQPSYIGGHESLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFH 521
Query: 160 NKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFF----SERGR 215
+ GP ++V P + L +W E TWAP + AVVY G R +R + ++R +
Sbjct: 522 EHQLYGPFLLVVPLSTLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQTKRLK 581
Query: 216 FNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTP 275
FN+L+T Y+++++D+ +L + W ++ VDE HRLKN + L KT+ ++ RLL+TGTP
Sbjct: 582 FNILLTTYEILLKDKSFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTP 641
Query: 276 IQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRP 335
+QNSL+ELWSLL+F++P F+S E+FEE + ++ G +L H + P
Sbjct: 642 LQNSLKELWSLLHFIMPEKFSSWEDFEE-EHGKGREYGYASL------------HKELEP 688
Query: 336 FILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-GKSKSLQNLS 394
F+LRR K +VEK LP K + IL+ +MSA QK YY+ + L G+ G + N+
Sbjct: 689 FLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIM 748
Query: 395 MQLRKCCNHPYLF--VGEYNMWRKEE----IIRASGKFELLDRLLPKLRKSGHRVLLFSQ 448
M+L+KCCNH YL + + K+E +IR+SGK LLD+LL +LR+ G+RVL+FSQ
Sbjct: 749 MELKKCCNHCYLIKPPDDNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQ 808
Query: 449 MTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLN 508
M R++DIL YLK F F RLDGS K E R L FNA S F FLLSTRAGGLG+N
Sbjct: 809 MVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGIN 868
Query: 509 LQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGI 568
L +ADTV+IFDSDWNPQ D QA+ RAHRIGQKK+V ++ LV+ GS+EE ILERAK+KM +
Sbjct: 869 LASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVL 928
Query: 569 DAKVIQ------AGLFNTTSTAQD----RREMLKEIMRRGTSSL 602
D VIQ + +T ST +E L I++ G L
Sbjct: 929 DHLVIQRMDTTGKTVLHTGSTPSSSTPFNKEELSAILKFGAEEL 972
>sp|O14646|CHD1_HUMAN Chromodomain-helicase-DNA-binding protein 1 OS=Homo sapiens GN=CHD1
PE=1 SV=2
Length = 1710
Score = 411 bits (1057), Expect = e-114, Method: Compositional matrix adjust.
Identities = 231/486 (47%), Positives = 316/486 (65%), Gaps = 27/486 (5%)
Query: 103 VTEQPTLL---QGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLE 159
+ +QP+ + +G ELR YQL GL W+ + + ILADEMGLGKTIQTI+ + YL
Sbjct: 466 LKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFH 525
Query: 160 NKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFS----ERGR 215
+ GP ++V P + L +W E TWA + AVVY G + R +R ++ +R +
Sbjct: 526 EHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWTHHQTKRLK 585
Query: 216 FNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTP 275
FN+L+T Y+++++D+ +L + W ++ VDE HRLKN + L KT+ ++ RLL+TGTP
Sbjct: 586 FNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTP 645
Query: 276 IQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRP 335
+QNSL+ELWSLL+F++P F+S E+FEE + ++ G +L H + P
Sbjct: 646 LQNSLKELWSLLHFIMPEKFSSWEDFEE-EHGKGREYGYASL------------HKELEP 692
Query: 336 FILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-GKSKSLQNLS 394
F+LRR K +VEK LP K + IL+ +MSA QK YY+ + L G+ G + N+
Sbjct: 693 FLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIM 752
Query: 395 MQLRKCCNHPYLFVGEYN--MWRKEE----IIRASGKFELLDRLLPKLRKSGHRVLLFSQ 448
M+L+KCCNH YL N + K+E +IR+SGK LLD+LL +LR+ G+RVL+FSQ
Sbjct: 753 MELKKCCNHCYLIKPPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQ 812
Query: 449 MTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLN 508
M R++DIL YLK F F RLDGS K E R L FNA S F FLLSTRAGGLG+N
Sbjct: 813 MVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGIN 872
Query: 509 LQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGI 568
L +ADTV+IFDSDWNPQ D QA+ RAHRIGQKK+V ++ LV+ GS+EE ILERAK+KM +
Sbjct: 873 LASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVL 932
Query: 569 DAKVIQ 574
D VIQ
Sbjct: 933 DHLVIQ 938
>sp|P40201|CHD1_MOUSE Chromodomain-helicase-DNA-binding protein 1 OS=Mus musculus GN=Chd1
PE=1 SV=3
Length = 1711
Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust.
Identities = 231/486 (47%), Positives = 316/486 (65%), Gaps = 27/486 (5%)
Query: 103 VTEQPTLL---QGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLE 159
+ +QP+ + +G ELR YQL GL W+ + + ILADEMGLGKTIQTI+ + YL
Sbjct: 464 LKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFH 523
Query: 160 NKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFF----SERGR 215
+ GP ++V P + L +W E TWA + AVVY G + R +R + ++R +
Sbjct: 524 EHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLK 583
Query: 216 FNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTP 275
FN+L+T Y+++++D+ +L + W ++ VDE HRLKN + L KT+ ++ RLL+TGTP
Sbjct: 584 FNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTP 643
Query: 276 IQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRP 335
+QNSL+ELWSLL+F++P F+S E+FEE + ++ G +L H + P
Sbjct: 644 LQNSLKELWSLLHFIMPEKFSSWEDFEE-EHGKGREYGYASL------------HKELEP 690
Query: 336 FILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-GKSKSLQNLS 394
F+LRR K +VEK LP K + IL+ +MSA QK YY+ + L G+ G + N+
Sbjct: 691 FLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIM 750
Query: 395 MQLRKCCNHPYLFVGEYN--MWRKEE----IIRASGKFELLDRLLPKLRKSGHRVLLFSQ 448
M+L+KCCNH YL N + K+E +IR+SGK LLD+LL +LR+ G+RVL+FSQ
Sbjct: 751 MELKKCCNHCYLIKPPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQ 810
Query: 449 MTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLN 508
M R++DIL YLK F F RLDGS K E R L FNA S F FLLSTRAGGLG+N
Sbjct: 811 MVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGIN 870
Query: 509 LQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGI 568
L +ADTV+IFDSDWNPQ D QA+ RAHRIGQKK+V ++ LV+ GS+EE ILERAK+KM +
Sbjct: 871 LASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVL 930
Query: 569 DAKVIQ 574
D VIQ
Sbjct: 931 DHLVIQ 936
>sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3 homolog OS=Caenorhabditis
elegans GN=chd-3 PE=2 SV=2
Length = 1787
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/533 (40%), Positives = 318/533 (59%), Gaps = 42/533 (7%)
Query: 99 IEEKVTEQPTLLQ--GGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAY 156
I +K QP + GG L YQLEG+ W+ ++N + ILADEMGLGKT+Q++ +
Sbjct: 598 ILKKYEVQPDFISETGGNLHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLYT 657
Query: 157 LLENKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFS----- 211
L++ GP +I AP + + NW E W P V Y G + R +RE FS
Sbjct: 658 LMKEGHTKGPFLIAAPLSTIINWEREAELWCPDFYVVTYVGDRESRMVIREHEFSFVDGA 717
Query: 212 -------------ERGRFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAK 258
E +F+VL+T Y+ I D+ L + W ++VDE HRLKN++ K
Sbjct: 718 VRGGPKVSKIKTLENLKFHVLLTSYECINMDKAILSSIDWAALVVDEAHRLKNNQSTFFK 777
Query: 259 TISGYQIQRRLLLTGTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALT 318
+ Y IQ R+LLTGTP+QN+L+EL+ LLNFL P FN +E+F F+ ++
Sbjct: 778 NLREYNIQYRVLLTGTPLQNNLEELFHLLNFLAPDRFNQLESFTAEFSE---------IS 828
Query: 319 DEEQLLIIRRLHHVIRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRV 378
E+Q I +LH+++ P +LRR K +V +P K ++I++ ++SA QK YY+ +
Sbjct: 829 KEDQ---IEKLHNLLGPHMLRRLKADVLTGMPSKQELIVRVELSAMQKKYYKNILTRNFD 885
Query: 379 GLDTGTGKSK-SLQNLSMQLRKCCNHPYLFVGEY--------NMWRKEEIIRASGKFELL 429
L+ G ++ SL N+ M+L+KCCNHPYLF+ M+ +I+ +GKF LL
Sbjct: 886 ALNVKNGGTQMSLINIIMELKKCCNHPYLFMKACLEAPKLKNGMYEGSALIKNAGKFVLL 945
Query: 430 DRLLPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAP 489
++L KL+ GHRVL+FSQMT ++DILE + + +K+ R+DGS ++R + ++NAP
Sbjct: 946 QKMLRKLKDGGHRVLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQDAIDRYNAP 1005
Query: 490 DSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLV 549
+ F+FLLSTRAGGLG+NL TADTVII+DSDWNP D QA RAHR+GQK +V ++ V
Sbjct: 1006 GAKQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFV 1065
Query: 550 SVGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRRGTSSL 602
+ GS+EE I AK+KM + V++AGL + + E L +++R GT L
Sbjct: 1066 TKGSVEERITSVAKKKMLLTHLVVRAGLGAKDGKSMSKTE-LDDVLRWGTEEL 1117
>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3
PE=1 SV=3
Length = 2000
Score = 402 bits (1034), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/549 (40%), Positives = 321/549 (58%), Gaps = 43/549 (7%)
Query: 86 LEGQRQYNSAIHSIEEKVTEQPTLLQ--GGELRAYQLEGLQWMLSLFNNNLNGILADEMG 143
L+G +S + K QP + GG L YQLEGL W+ + + ILADEMG
Sbjct: 705 LQGDGPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG 764
Query: 144 LGKTIQTIALIAYLLENKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERK 203
LGKTIQTI + L + GP ++ AP + + NW EF WAP V Y G D R
Sbjct: 765 LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRA 824
Query: 204 AMREEFFS------------------ERGRFNVLITHYDLIMRDRQYLKKVQWIYMIVDE 245
+RE FS + +F+VL+T Y+LI D+ L ++W ++VDE
Sbjct: 825 IIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDE 884
Query: 246 GHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQELWSLLNFLLPTIFNSVENFEEWF 305
HRLKN++ + ++GY+I +LLLTGTP+QN+L+EL+ LLNFL P FN++E F E F
Sbjct: 885 AHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF 944
Query: 306 NAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQ 365
++ E+Q I++LH ++ P +LRR K +V K +P K+++I++ ++S Q
Sbjct: 945 ---------ADISKEDQ---IKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQ 992
Query: 366 KVYYQQVTDVGRVGLDT-GTGKSKSLQNLSMQLRKCCNHPYLFVGEY--------NMWRK 416
K YY+ + L++ G G SL N+ M L+KCCNHPYLF +
Sbjct: 993 KKYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEG 1052
Query: 417 EEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKT 476
+I++SGK LL ++L KL++ GHRVL+FSQMT+++D+LE +L +K+ R+DG
Sbjct: 1053 GALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITG 1112
Query: 477 EERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHR 536
R + +FNAP + F FLLSTRAGGLG+NL TADTVIIFDSDWNP D QA RAHR
Sbjct: 1113 ALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHR 1172
Query: 537 IGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLKEIMR 596
IGQ +V ++ V+ S+EE I + AK+KM + V++ GL + + ++ L +I++
Sbjct: 1173 IGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMS--KQELDDILK 1230
Query: 597 RGTSSLGTD 605
GT L D
Sbjct: 1231 FGTEELFKD 1239
>sp|A9X4T1|CHD1_BOMMO Chromodomain-helicase-DNA-binding protein 1 OS=Bombyx mori GN=CHD1
PE=1 SV=1
Length = 1365
Score = 402 bits (1033), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/489 (45%), Positives = 307/489 (62%), Gaps = 29/489 (5%)
Query: 102 KVTEQPTLL---QGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLL 158
++ EQP + LR YQ++GL W++ + + + ILADEMGLGKTIQTI + YL
Sbjct: 189 QIKEQPEYVGKDSSYHLRDYQMDGLNWLIHSWCKDNSVILADEMGLGKTIQTICFLYYLF 248
Query: 159 ENKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFS----ERG 214
+++ + GP + V P + + W EF WAP I V Y G R +R+ +S +R
Sbjct: 249 KSQHLYGPFLCVVPLSTMTAWQREFQQWAPDINVVTYIGDVSSRDIIRQFEWSFSSSKRL 308
Query: 215 RFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGT 274
+FN ++T Y+++++DRQ+L+ W ++VDE HRLKN + L K + + RLL+TGT
Sbjct: 309 KFNAILTTYEILLKDRQFLRSFSWACLLVDEAHRLKNDDSLLYKALKEFDTNHRLLVTGT 368
Query: 275 PIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIR 334
P+QNSL+ELW+LL+F++P F S E+FE KD A E +LH +
Sbjct: 369 PLQNSLKELWALLHFIMPYKFESWEDFE-------KDHEDAATKGYE------KLHKQLE 415
Query: 335 PFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-GKSKSLQNL 393
PFILRR+K +VEK LP K + IL+ +M++ QK YY+ + L G G + N+
Sbjct: 416 PFILRRQKKDVEKSLPAKVEQILRVEMTSIQKQYYKWILTKNYSALRKGVKGSINTFINI 475
Query: 394 SMQLRKCCNHPYLFVGEYNMWRK--------EEIIRASGKFELLDRLLPKLRKSGHRVLL 445
++L+KCCNH L E R E+++R SGK LLD+LL +L+++GHRVL+
Sbjct: 476 VIELKKCCNHALLTKPEDFESRASLATSDAVEKLLRGSGKLLLLDKLLCRLKETGHRVLI 535
Query: 446 FSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGL 505
FSQM R++DIL YL+ F F RLDGS K E R L FNA S F FLLSTRAGGL
Sbjct: 536 FSQMVRMLDILAEYLQRRHFPFQRLDGSIKGELRKQALDHFNAEGSQDFCFLLSTRAGGL 595
Query: 506 GLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQK 565
G+NL TADTVIIFDSDWNPQ D QA+ RAHRIGQK +V ++ LV+ S+EE I+ERAK+K
Sbjct: 596 GINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEDIVERAKRK 655
Query: 566 MGIDAKVIQ 574
M +D VIQ
Sbjct: 656 MVLDHLVIQ 664
>sp|G5EBZ4|LE418_CAEEL Protein let-418 OS=Caenorhabditis elegans GN=let-418 PE=1 SV=1
Length = 1829
Score = 401 bits (1030), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/533 (40%), Positives = 318/533 (59%), Gaps = 42/533 (7%)
Query: 99 IEEKVTEQPTLLQ--GGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAY 156
I +K QP + GG+L YQLEGL W+ ++N + ILADEMGLGKT+Q++ +
Sbjct: 584 IRKKYEVQPDYVTETGGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYS 643
Query: 157 LLENKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFS----- 211
L++ GP +I AP + + NW E W P V Y G D R +RE FS
Sbjct: 644 LMKEGHCKGPFLIAAPLSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGA 703
Query: 212 -------------ERGRFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAK 258
E +F+VL+T Y+ I D+ L ++W ++VDE HRLKN++ K
Sbjct: 704 VRSGPKASKMKTTENMKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFK 763
Query: 259 TISGYQIQRRLLLTGTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALT 318
++ Y I R+LLTGTP+QN+L+EL+ LLNFL FN +E F FN ++
Sbjct: 764 NLNEYTIHYRVLLTGTPLQNNLEELFHLLNFLSKERFNQLEAFTAEFNE---------IS 814
Query: 319 DEEQLLIIRRLHHVIRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRV 378
E+Q I +LH+++ P +LRR K +V +P KS++I++ ++SA QK +Y+ +
Sbjct: 815 KEDQ---IEKLHNLLGPHMLRRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFD 871
Query: 379 GLDTGTGKSK-SLQNLSMQLRKCCNHPYLFVG--------EYNMWRKEEIIRASGKFELL 429
L+ G ++ SL N+ M+L+KCCNHPYLFV + M+ +I+ SGKF LL
Sbjct: 872 ALNVKNGGTQMSLMNVLMELKKCCNHPYLFVKAELEAPKEKNGMYEGTALIKNSGKFVLL 931
Query: 430 DRLLPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAP 489
++L KL+ GHRVL+FSQMTR++DI+E + +++ R+DGS + R + ++NAP
Sbjct: 932 QKMLRKLKDGGHRVLIFSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAP 991
Query: 490 DSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLV 549
+ F+FLLSTRAGGLG+NL TADTVII+DSDWNP D QA RAHR+GQK +V ++ V
Sbjct: 992 GAQQFIFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFV 1051
Query: 550 SVGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRRGTSSL 602
+ S+EE I AK+KM ++ V++AGL + E L +++R GT L
Sbjct: 1052 TKKSVEEKITSVAKKKMLLNHLVVRAGLGGKEGKTMSKTE-LDDVLRWGTEEL 1103
>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens GN=CHD5
PE=2 SV=1
Length = 1954
Score = 398 bits (1023), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/533 (40%), Positives = 318/533 (59%), Gaps = 43/533 (8%)
Query: 102 KVTEQPTLLQ--GGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLE 159
K +QP + GG L YQLEGL W+ + + ILADEMGLGKT+QTI + L +
Sbjct: 685 KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 744
Query: 160 NKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERG----- 214
GP+++ AP + + NW EF WAP V Y G + R +RE FS
Sbjct: 745 EGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRS 804
Query: 215 -------------RFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTIS 261
+F+VL+T Y+LI D+ L ++W ++VDE HRLKN++ + ++
Sbjct: 805 GKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLN 864
Query: 262 GYQIQRRLLLTGTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEE 321
Y+I +LLLTGTP+QN+L+EL+ LLNFL P FN++E F E F ++ E+
Sbjct: 865 SYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF---------ADISKED 915
Query: 322 QLLIIRRLHHVIRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLD 381
Q I++LH ++ P +LRR K +V K +P K+++I++ ++S QK YY+ + L+
Sbjct: 916 Q---IKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALN 972
Query: 382 T-GTGKSKSLQNLSMQLRKCCNHPYLF--------VGEYNMWRKEEIIRASGKFELLDRL 432
+ G G SL N+ M L+KCCNHPYLF V + ++++SGK LL ++
Sbjct: 973 SKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKM 1032
Query: 433 LPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSP 492
L KLR GHRVL+FSQMT+++D+LE +L+ +K+ R+DG R + +FNAP +
Sbjct: 1033 LKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQ 1092
Query: 493 YFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVG 552
F FLLSTRAGGLG+NL TADTVII+DSDWNP D QA RAHRIGQ K+V ++ V+
Sbjct: 1093 QFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRA 1152
Query: 553 SIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRRGTSSLGTD 605
S+EE I + AK+KM + V++ GL + + + ++ L +I++ GT L D
Sbjct: 1153 SVEERITQVAKRKMMLTHLVVRPGLGSKSGSMT--KQELDDILKFGTEELFKD 1203
>sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3 OS=Drosophila
melanogaster GN=Chd3 PE=2 SV=3
Length = 892
Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust.
Identities = 225/602 (37%), Positives = 350/602 (58%), Gaps = 44/602 (7%)
Query: 89 QRQYNSAIHSIEEKVTEQPTLLQ--GGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGK 146
QR + + +K +QP L+ G +L +Q+EG+ W+ + + ILADEMGLGK
Sbjct: 239 QRDRPAPTIDLNKKYEDQPVFLKEAGLKLHPFQIEGVSWLRYSWGQGIPTILADEMGLGK 298
Query: 147 TIQTIALIAYLLENKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMR 206
TIQT+ + L + GP +I P + L NW E WAP + V Y G R +R
Sbjct: 299 TIQTVVFLYSLFKEGHCRGPFLISVPLSTLTNWERELELWAPELYCVTYVGGKTARAVIR 358
Query: 207 EEFFS-------------ERGRFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHE 253
+ S + +FNV++T Y+ I D +L + W ++VDE HRL++++
Sbjct: 359 KHEISFEEVTTKTMRENQTQYKFNVMLTSYEFISVDAAFLGCIDWAALVVDEAHRLRSNQ 418
Query: 254 CALAKTISGYQIQRRLLLTGTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRG 313
+ +S Y+I +LLLTGTP+QN+L+EL+ LLNFL FN ++ F+ A F D
Sbjct: 419 SKFFRILSKYRIGYKLLLTGTPLQNNLEELFHLLNFLSSGKFNDLQTFQ----AEFTD-- 472
Query: 314 QVALTDEEQLLIIRRLHHVIRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVT 373
++ EEQ ++RLH ++ P +LRR K +V K +P KS+ I++ ++S+ QK +Y+ +
Sbjct: 473 ---VSKEEQ---VKRLHEILEPHMLRRLKADVLKSMPPKSEFIVRVELSSMQKKFYKHIL 526
Query: 374 DVGRVGLD-TGTGKSKSLQNLSMQLRKCCNHPYLF--------VGEYNMWRKEEIIRASG 424
L+ G G+ SL N+ M LRKCCNHPYLF + ++ + +ASG
Sbjct: 527 TKNFKALNQKGGGRVCSLLNIMMDLRKCCNHPYLFPSAAEEATISPSGLYEMSSLTKASG 586
Query: 425 KFELLDRLLPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLK 484
K +LL ++L +L+ HRVLLFSQMT+++++LE +L+ +++ R+DGS K + R +
Sbjct: 587 KLDLLSKMLKQLKADNHRVLLFSQMTKMLNVLEHFLEGEGYQYDRIDGSIKGDLRQKAID 646
Query: 485 QFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVR 544
+FN P S +F+FLLSTRAGGLG+NL TADTVIIFDSDWNP D QA RAHR+GQKK+V
Sbjct: 647 RFNDPVSEHFVFLLSTRAGGLGINLATADTVIIFDSDWNPHNDVQAFSRAHRMGQKKKVM 706
Query: 545 VFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRRGTSSLGT 604
++ V+ S+EE I++ AK KM + V++ G+ T+ ++ L++I+R GT L
Sbjct: 707 IYRFVTHNSVEERIMQVAKHKMMLTHLVVRPGMGGMTTNFS--KDELEDILRFGTEDLFK 764
Query: 605 DVPSEREINRLAARSDEEFWLFEKMDEERRQKENYRSRLMEDHEVPEWAYSAPDNKEEQK 664
D SE A +D L ++ + +KE++ + + +V +Y+ ++ EE
Sbjct: 765 DGKSEAIHYDDKAVAD----LLDRTNRGIEEKESWANEYLSSFKVA--SYATKEDHEEHD 818
Query: 665 GF 666
+
Sbjct: 819 DY 820
>sp|Q3B7N1|CHD1L_BOVIN Chromodomain-helicase-DNA-binding protein 1-like OS=Bos taurus
GN=CHD1L PE=2 SV=1
Length = 897
Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust.
Identities = 232/573 (40%), Positives = 333/573 (58%), Gaps = 33/573 (5%)
Query: 110 LQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVI 169
L G LR YQL+G+ W+ F+ IL DEMGLGKT QTIAL YL GP +I
Sbjct: 43 LTGIHLRPYQLQGVNWLAQCFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLI 102
Query: 170 VAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLITHYDLIMRD 229
+ P +VL NW E +AP ++ V Y G D+R ++++ E RF+VL+T Y++ ++D
Sbjct: 103 LCPLSVLSNWKEEMERFAPGLSCVTYAGDKDKRACLQQDLKQE-SRFHVLLTTYEICLKD 161
Query: 230 RQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQELWSLLNF 289
+LK W ++VDE HRLKN L KT+S + + LLLTGTPIQNSLQEL+SLL+F
Sbjct: 162 ASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSF 221
Query: 290 LLPTIFN--SVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKDEVEK 347
+ P +F+ VE+F + + K+ + L+ +++PF+LRR K EV
Sbjct: 222 VEPDLFSKEQVEDFVQRYQDIEKESESAS-----------ELYKLLQPFLLRRVKAEVAT 270
Query: 348 YLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKSLQNLSMQLRKCCNHPYLF 407
LP K++V++ MSA QK YY+ + + T K LQN+ QLRKC +HPYLF
Sbjct: 271 ELPRKTEVVIYHGMSALQKKYYKAILMKDLDAFENETAKKVKLQNVLSQLRKCVDHPYLF 330
Query: 408 VG-EYNMWR-KEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDF 465
G E + + +I ASGK LLD+LL L GHRVLLFSQMT+++DIL+ YL +
Sbjct: 331 DGVEPEPFEIGDHLIEASGKLHLLDKLLAFLYSKGHRVLLFSQMTQMLDILQDYLDYRGY 390
Query: 466 KFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQ 525
+ R+DGS + EER +K F P F FLLSTRAGG+G+NL ADTVI FDSD+NPQ
Sbjct: 391 SYERVDGSVRGEERHLAIKNFG--QQPIFTFLLSTRAGGVGMNLTAADTVIFFDSDFNPQ 448
Query: 526 MDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTS--T 583
D QA RAHRIGQ K V+V L+ ++EE++ +A K+ + +I+ G F +
Sbjct: 449 NDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNTIIEGGHFTLGAQKP 508
Query: 584 AQDRREMLKEIMRRGTSSLGTDVPS---EREINRLAARSDEEFWLFEKM---DEERRQKE 637
A D L EI++ G L + S E ++ + +++ W+ + + +E R+ E
Sbjct: 509 AADADLQLSEILKFGLDKLLSSEGSTMHEIDLKSILGETEDGHWVSDALPTAEEGSREPE 568
Query: 638 NYRSR--LMEDHEVPEWAYSAPDNKEEQKGFEK 668
++ L E + YS +KE+++ FE+
Sbjct: 569 EGKNHMYLFEGKD-----YSKEPSKEDRESFEQ 596
>sp|Q7ZU90|CHD1L_DANRE Chromodomain-helicase-DNA-binding protein 1-like OS=Danio rerio
GN=chd1l PE=2 SV=1
Length = 1026
Score = 394 bits (1012), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/494 (43%), Positives = 304/494 (61%), Gaps = 20/494 (4%)
Query: 115 LRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVAPKA 174
LR YQL+G++W+ N IL DEMGLGKT QTI+L+AY + + GP +++ P A
Sbjct: 35 LRPYQLDGVKWLSLCMKNQQGCILGDEMGLGKTCQTISLLAYARGSLKMNGPFLVLCPLA 94
Query: 175 VLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLITHYDLIMRDRQYLK 234
VL NW E + PS++ + Y G ++R +++ S+ RF+VL+T Y++ ++D +YLK
Sbjct: 95 VLENWRQELERFCPSLSVICYTGDKEKRAELQQNLKSD-PRFHVLLTTYEMCLKDARYLK 153
Query: 235 KVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQELWSLLNFLLPTI 294
+W ++VDE HRLKN E L +T+ + + R+LLTGTPIQN+LQE++SLL F+ P++
Sbjct: 154 SWKWKILVVDEAHRLKNQESLLHQTLKEFTVGFRVLLTGTPIQNNLQEVYSLLTFIQPSV 213
Query: 295 FNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKDEVEKYLPGKSQ 354
F E E++ NA + + AL DE LH V++PF+LRR K EV LP K++
Sbjct: 214 FLP-EAVEDFVNAYADIQTEPALVDE--------LHQVLQPFLLRRVKAEVAAELPKKTE 264
Query: 355 VILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKSLQNLSMQLRKCCNHPYLFVG----E 410
+++ +SA QK YY+ + T L N+ MQLRKC +HPYLF G
Sbjct: 265 LVVFHGLSALQKRYYKAILMRDLDAFRTDQSTKTRLLNVLMQLRKCVDHPYLFDGVEPEP 324
Query: 411 YNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKFLRL 470
+ M E ++ ASGK LLD +L L++ GH VLLFSQMTR++DIL+ YL+ + + RL
Sbjct: 325 FEM--GEHLVEASGKLSLLDSMLAYLQEGGHHVLLFSQMTRMLDILQDYLEYRGYSYERL 382
Query: 471 DGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQA 530
DGS + EER +K F+ D F+FLLST+AGG+G+NL ADTVI D D+NPQ D QA
Sbjct: 383 DGSVRGEERNLAIKNFSTKD--VFIFLLSTKAGGVGMNLTAADTVIFVDGDFNPQNDLQA 440
Query: 531 EDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRRE- 589
RAHRIGQ + V+V L+ +IEE+I RA K+ + VI+ G F+ AQ
Sbjct: 441 AARAHRIGQTRPVKVIRLLGRDTIEEIIYSRAVSKLRLTDTVIEEGRFSLLDQAQSAASG 500
Query: 590 -MLKEIMRRGTSSL 602
L EI++ G L
Sbjct: 501 LQLSEILKFGVDKL 514
>sp|Q86WJ1|CHD1L_HUMAN Chromodomain-helicase-DNA-binding protein 1-like OS=Homo sapiens
GN=CHD1L PE=1 SV=2
Length = 897
Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/497 (43%), Positives = 294/497 (59%), Gaps = 16/497 (3%)
Query: 110 LQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVI 169
L G LR+YQLEG+ W+ F+ IL DEMGLGKT QTIAL YL GP +I
Sbjct: 41 LTGIHLRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLI 100
Query: 170 VAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLITHYDLIMRD 229
+ P +VL NW E +AP ++ V Y G +ER ++++ E RF+VL+T Y++ ++D
Sbjct: 101 LCPLSVLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDLKQE-SRFHVLLTTYEICLKD 159
Query: 230 RQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQELWSLLNF 289
+LK W ++VDE HRLKN L KT+S + + LLLTGTPIQNSLQEL+SLL+F
Sbjct: 160 ASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSF 219
Query: 290 LLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKDEVEKYL 349
+ P +F+ E F R Q + E LH +++PF+LRR K EV L
Sbjct: 220 VEPDLFSKEE------VGDFIQRYQDIEKESES---ASELHKLLQPFLLRRVKAEVATEL 270
Query: 350 PGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKSLQNLSMQLRKCCNHPYLFVG 409
P K++V++ MSA QK YY+ + + T K LQN+ QLRKC +HPYLF G
Sbjct: 271 PKKTEVVIYHGMSALQKKYYKAILMKDLDAFENETAKKVKLQNILSQLRKCVDHPYLFDG 330
Query: 410 --EYNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKF 467
+ + ASGK LLD+LL L GHRVLLFSQMT+++DIL+ Y+ + +
Sbjct: 331 VEPEPFEVGDHLTEASGKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSY 390
Query: 468 LRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMD 527
R+DGS + EER +K F P F+FLLSTRAGG+G+NL ADTVI DSD+NPQ D
Sbjct: 391 ERVDGSVRGEERHLAIKNFG--QQPIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQND 448
Query: 528 QQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTS--TAQ 585
QA RAHRIGQ K V+V L+ ++EE++ +A K+ + +I+ G F + A
Sbjct: 449 LQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEGGHFTLGAQKPAA 508
Query: 586 DRREMLKEIMRRGTSSL 602
D L EI++ G L
Sbjct: 509 DADLQLSEILKFGLDKL 525
>sp|Q9CXF7|CHD1L_MOUSE Chromodomain-helicase-DNA-binding protein 1-like OS=Mus musculus
GN=Chd1l PE=2 SV=1
Length = 900
Score = 390 bits (1001), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/499 (42%), Positives = 297/499 (59%), Gaps = 20/499 (4%)
Query: 110 LQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVI 169
L G LR+YQLEG+ W++ F+ IL DEMGLGKT QTIAL+ YL+ GP ++
Sbjct: 35 LTGIRLRSYQLEGVNWLVQCFHCQNGCILGDEMGLGKTCQTIALLIYLVGRLNDEGPFLV 94
Query: 170 VAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLITHYDLIMRD 229
+ P +VL NW E +AP ++ V Y G +ER ++++ E G F+VL+T Y++ ++D
Sbjct: 95 LCPLSVLSNWKEEMERFAPGLSCVTYTGDKEERARLQQDLRQESG-FHVLLTTYEICLKD 153
Query: 230 RQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQELWSLLNF 289
+LK W + VDE HRLKN L +T+S + RLLLTGTPIQNSL+EL+SLL
Sbjct: 154 ASFLKSFSWSVLAVDEAHRLKNQSSLLHRTLSEFSAVFRLLLTGTPIQNSLRELYSLLCV 213
Query: 290 LLPTIF--NSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKDEVEK 347
+ P +F VE+F + + K+ + LH +++PF+LRR K +V
Sbjct: 214 VEPDLFCREQVEDFVQRYQDIEKESKSAS-----------ELHRLLQPFLLRRVKAQVAT 262
Query: 348 YLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKSLQNLSMQLRKCCNHPYLF 407
LP K++V++ MSA QK YY+ + + T K LQN+ QLRKC +HPYLF
Sbjct: 263 ELPKKTEVVVYHGMSALQKKYYKAILMKDLDAFENETAKKVKLQNILTQLRKCVDHPYLF 322
Query: 408 VG--EYNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDF 465
G E +I ASGK LLDRLL L GHRVLLFSQMT ++DIL+ Y+ +
Sbjct: 323 DGVEPEPFEVGEHLIEASGKLHLLDRLLAFLYSGGHRVLLFSQMTHMLDILQDYMDYRGY 382
Query: 466 KFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQ 525
+ R+DGS + EER +K F + P F+FLLSTRAGG+G+NL ADTVI DSD+NPQ
Sbjct: 383 SYERVDGSVRGEERHLAIKNFG--NQPIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQ 440
Query: 526 MDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTS--T 583
D QA RAHRIGQ K V+V L+ ++EE++ +A K+ + VI+ G F +
Sbjct: 441 NDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMVIEGGHFTPGAQKP 500
Query: 584 AQDRREMLKEIMRRGTSSL 602
+ + L EI++ G L
Sbjct: 501 SAEADFQLSEILKFGLDKL 519
>sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2 homolog OS=Drosophila
melanogaster GN=Mi-2 PE=1 SV=2
Length = 1982
Score = 389 bits (998), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/531 (39%), Positives = 313/531 (58%), Gaps = 41/531 (7%)
Query: 99 IEEKVTEQPTLLQGG--ELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAY 156
+++K +QP L+G +L YQ+EG+ W+ + ++ ILADEMGLGKTIQT+ +
Sbjct: 712 LKKKYEDQPAFLEGTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFLYS 771
Query: 157 LLENKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMRE-EFFSERG- 214
L + GP ++ P + L NW EF WAP + Y G D R +RE E E G
Sbjct: 772 LYKEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIRENELSFEEGA 831
Query: 215 --------------RFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTI 260
+FNVL+T Y+LI D L + W ++VDE HRLK+++ + +
Sbjct: 832 IRGSKVSRLRTTQYKFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRLKSNQSKFFRIL 891
Query: 261 SGYQIQRRLLLTGTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDE 320
+ Y I +LLLTGTP+QN+L+EL+ LLNFL FN ++ F+ F ++ E
Sbjct: 892 NSYTIAYKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGEF---------ADVSKE 942
Query: 321 EQLLIIRRLHHVIRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGL 380
EQ ++RLH ++ P +LRR K +V K +P KS+ I++ ++SA QK +Y+ + L
Sbjct: 943 EQ---VKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKNYEAL 999
Query: 381 DTGTGK-SKSLQNLSMQLRKCCNHPYLFVGEYN--------MWRKEEIIRASGKFELLDR 431
++ +G S SL N+ M L+KCCNHPYLF ++ + +A+GK LL +
Sbjct: 1000 NSKSGGGSCSLINIMMDLKKCCNHPYLFPSAAEEATTAAGGLYEINSLTKAAGKLVLLSK 1059
Query: 432 LLPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDS 491
+L +L+ HRVL+FSQMT+++DILE +L+ +K+ R+DG R + +FNAP +
Sbjct: 1060 MLKQLKAQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQEAIDRFNAPGA 1119
Query: 492 PYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSV 551
F+FLLSTRAGGLG+NL TADTVII+DSDWNP D QA RAHRIGQ +V ++ V+
Sbjct: 1120 QQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTR 1179
Query: 552 GSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRRGTSSL 602
S+EE + + AK+KM + V++ G+ A ++ L +I+R GT L
Sbjct: 1180 NSVEERVTQVAKRKMMLTHLVVRPGM--GGKGANFTKQELDDILRFGTEDL 1228
>sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus GN=Chd4
PE=1 SV=1
Length = 1915
Score = 389 bits (998), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/533 (41%), Positives = 315/533 (59%), Gaps = 43/533 (8%)
Query: 102 KVTEQPTLLQ--GGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLE 159
K QP L GG L YQ+EGL W+ + + ILADEMGLGKT+QT + L +
Sbjct: 704 KYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYK 763
Query: 160 NKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSE-----RG 214
GP ++ AP + + NW EF WAP + V Y G D R +RE FS RG
Sbjct: 764 EGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRG 823
Query: 215 -------------RFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTIS 261
+F+VL+T Y+LI D L + W +IVDE HRLKN++ + ++
Sbjct: 824 GKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLN 883
Query: 262 GYQIQRRLLLTGTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEE 321
GY +Q +LLLTGTP+QN+L+EL+ LLNFL P F+++E F E F +A D+
Sbjct: 884 GYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEF-------ADIAKEDQ- 935
Query: 322 QLLIIRRLHHVIRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLD 381
I++LH ++ P +LRR K +V K +P K+++I++ ++S QK YY+ + L+
Sbjct: 936 ----IKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALN 991
Query: 382 T-GTGKSKSLQNLSMQLRKCCNHPYLFVGEY--------NMWRKEEIIRASGKFELLDRL 432
G G SL N+ M L+KCCNHPYLF M+ +IRASGK LL ++
Sbjct: 992 ARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKM 1051
Query: 433 LPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSP 492
L L++ GHRVL+FSQMT+++D+LE +L+ +K+ R+DG R + +FNAP +
Sbjct: 1052 LKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQ 1111
Query: 493 YFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVG 552
F FLLSTRAGGLG+NL TADTVII+DSDWNP D QA RAHRIGQ K+V ++ V+
Sbjct: 1112 QFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRA 1171
Query: 553 SIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRRGTSSLGTD 605
S+EE I + AK+KM + V++ GL + T + ++ L +I++ GT L D
Sbjct: 1172 SVEERITQVAKKKMMLTHLVVRPGLGSKTGSMS--KQELDDILKFGTEELFKD 1222
>sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens GN=CHD4
PE=1 SV=2
Length = 1912
Score = 388 bits (997), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/533 (41%), Positives = 315/533 (59%), Gaps = 43/533 (8%)
Query: 102 KVTEQPTLLQ--GGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLE 159
K QP L GG L YQ+EGL W+ + + ILADEMGLGKT+QT + L +
Sbjct: 711 KYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYK 770
Query: 160 NKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSE-----RG 214
GP ++ AP + + NW EF WAP + V Y G D R +RE FS RG
Sbjct: 771 EGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRG 830
Query: 215 -------------RFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTIS 261
+F+VL+T Y+LI D L + W +IVDE HRLKN++ + ++
Sbjct: 831 GKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLN 890
Query: 262 GYQIQRRLLLTGTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEE 321
GY +Q +LLLTGTP+QN+L+EL+ LLNFL P F+++E F E F +A D+
Sbjct: 891 GYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEF-------ADIAKEDQ- 942
Query: 322 QLLIIRRLHHVIRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLD 381
I++LH ++ P +LRR K +V K +P K+++I++ ++S QK YY+ + L+
Sbjct: 943 ----IKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALN 998
Query: 382 T-GTGKSKSLQNLSMQLRKCCNHPYLFVGEY--------NMWRKEEIIRASGKFELLDRL 432
G G SL N+ M L+KCCNHPYLF M+ +IRASGK LL ++
Sbjct: 999 ARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKM 1058
Query: 433 LPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSP 492
L L++ GHRVL+FSQMT+++D+LE +L+ +K+ R+DG R + +FNAP +
Sbjct: 1059 LKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQ 1118
Query: 493 YFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVG 552
F FLLSTRAGGLG+NL TADTVII+DSDWNP D QA RAHRIGQ K+V ++ V+
Sbjct: 1119 QFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRA 1178
Query: 553 SIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRRGTSSLGTD 605
S+EE I + AK+KM + V++ GL + T + ++ L +I++ GT L D
Sbjct: 1179 SVEERITQVAKKKMMLTHLVVRPGLGSKTGSMS--KQELDDILKFGTEELFKD 1229
>sp|A2AJK6|CHD7_MOUSE Chromodomain-helicase-DNA-binding protein 7 OS=Mus musculus GN=Chd7
PE=1 SV=1
Length = 2986
Score = 388 bits (996), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/516 (40%), Positives = 318/516 (61%), Gaps = 44/516 (8%)
Query: 114 ELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVAPK 173
+LR YQLEG+ W+L + N N ILADEMGLGKTIQ+I + Y + KG+ GP +++AP
Sbjct: 957 KLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPFLVIAPL 1015
Query: 174 AVLPNWINEFSTWAPSIAAVVYDGRPDERKAMR--EEFFSE-RGR-------FNVLITHY 223
+ +PNW EF TW + VVY G R+ ++ E +F + +GR F+ +IT +
Sbjct: 1016 STIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTF 1074
Query: 224 DLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQEL 283
++I+ D L+ + W +++DE HRLKN C L + + ++ ++LLTGTP+QN+++EL
Sbjct: 1075 EMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEEL 1134
Query: 284 WSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKD 343
+SLL+FL P+ F S F + F L EEQ +++L +++P +LRR K+
Sbjct: 1135 FSLLHFLEPSRFPSETTFMQEFGD---------LKTEEQ---VQKLQAILKPMMLRRLKE 1182
Query: 344 EVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKS--KSLQNLSMQLRKCC 401
+VEK L K + I++ +++ QK YY+ + + L G G++ +L N M+LRKCC
Sbjct: 1183 DVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCC 1242
Query: 402 NHPYLFVG---------------EYNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLF 446
NHPYL G E ++ + +I+A+GK L+D+LLPKL+ GHRVL+F
Sbjct: 1243 NHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIF 1302
Query: 447 SQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLG 506
SQM R +DILE YL + + R+DG + R + +F+ PDS F+FLL TRAGGLG
Sbjct: 1303 SQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLG 1362
Query: 507 LNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKM 566
+NL ADT IIFDSDWNPQ D QA+ R HRIGQ K V+++ L++ S E + ++A K+
Sbjct: 1363 INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKL 1422
Query: 567 GIDAKVIQ--AGLFNTTSTAQD-RREMLKEIMRRGT 599
G+D V+Q +G N T+ Q ++ +++++R+G
Sbjct: 1423 GLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKGA 1458
>sp|Q9P2D1|CHD7_HUMAN Chromodomain-helicase-DNA-binding protein 7 OS=Homo sapiens GN=CHD7
PE=1 SV=3
Length = 2997
Score = 387 bits (995), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/516 (40%), Positives = 318/516 (61%), Gaps = 44/516 (8%)
Query: 114 ELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVAPK 173
+LR YQLEG+ W+L + N N ILADEMGLGKTIQ+I + Y + KG+ GP +++AP
Sbjct: 967 KLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPFLVIAPL 1025
Query: 174 AVLPNWINEFSTWAPSIAAVVYDGRPDERKAMR--EEFFSE-RGR-------FNVLITHY 223
+ +PNW EF TW + VVY G R+ ++ E +F + +GR F+ +IT +
Sbjct: 1026 STIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTF 1084
Query: 224 DLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQEL 283
++I+ D L+ + W +++DE HRLKN C L + + ++ ++LLTGTP+QN+++EL
Sbjct: 1085 EMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEEL 1144
Query: 284 WSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKD 343
+SLL+FL P+ F S F + F L EEQ +++L +++P +LRR K+
Sbjct: 1145 FSLLHFLEPSRFPSETTFMQEFGD---------LKTEEQ---VQKLQAILKPMMLRRLKE 1192
Query: 344 EVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKS--KSLQNLSMQLRKCC 401
+VEK L K + I++ +++ QK YY+ + + L G G++ +L N M+LRKCC
Sbjct: 1193 DVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCC 1252
Query: 402 NHPYLFVG---------------EYNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLF 446
NHPYL G E ++ + +I+A+GK L+D+LLPKL+ GHRVL+F
Sbjct: 1253 NHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIF 1312
Query: 447 SQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLG 506
SQM R +DILE YL + + R+DG + R + +F+ PDS F+FLL TRAGGLG
Sbjct: 1313 SQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLG 1372
Query: 507 LNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKM 566
+NL ADT IIFDSDWNPQ D QA+ R HRIGQ K V+++ L++ S E + ++A K+
Sbjct: 1373 INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKL 1432
Query: 567 GIDAKVIQ--AGLFNTTSTAQD-RREMLKEIMRRGT 599
G+D V+Q +G N T+ Q ++ +++++R+G
Sbjct: 1433 GLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKGA 1468
>sp|Q06A37|CHD7_CHICK Chromodomain-helicase-DNA-binding protein 7 OS=Gallus gallus GN=CHD7
PE=2 SV=1
Length = 3011
Score = 386 bits (991), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/516 (40%), Positives = 318/516 (61%), Gaps = 44/516 (8%)
Query: 114 ELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVAPK 173
+LR YQLEG+ W+L + N N ILADEMGLGKTIQ+I + Y + KG+ GP +++AP
Sbjct: 968 KLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPFLVIAPL 1026
Query: 174 AVLPNWINEFSTWAPSIAAVVYDGRPDERKAMR--EEFFSE-RGR-------FNVLITHY 223
+ +PNW EF TW + VVY G R+ ++ E +F + +GR F+ +IT +
Sbjct: 1027 STIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTF 1085
Query: 224 DLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQEL 283
++I+ D L+ + W +++DE HRLKN C L + + ++ ++LLTGTP+QN+++EL
Sbjct: 1086 EMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEEL 1145
Query: 284 WSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKD 343
+SLL+FL P F S F + F L EEQ +++L +++P +LRR K+
Sbjct: 1146 FSLLHFLEPGRFPSETTFMQEFGD---------LKTEEQ---VQKLQAILKPMMLRRLKE 1193
Query: 344 EVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKS--KSLQNLSMQLRKCC 401
+VEK L K + I++ +++ QK YY+ + + L G G++ +L N M+LRKCC
Sbjct: 1194 DVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGGGQANVPNLLNTMMELRKCC 1253
Query: 402 NHPYLFVGE-----------YNM----WRKEEIIRASGKFELLDRLLPKLRKSGHRVLLF 446
NHPYL G +N ++ + +I+A+GK L+D+LLPKL+ GHRVL+F
Sbjct: 1254 NHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIF 1313
Query: 447 SQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLG 506
SQM R +DILE YL + + R+DG + R + +F+ PDS F+FLL TRAGGLG
Sbjct: 1314 SQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLG 1373
Query: 507 LNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKM 566
+NL ADT IIFDSDWNPQ D QA+ R HRIGQ K V+++ L++ S E + ++A K+
Sbjct: 1374 INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKL 1433
Query: 567 GIDAKVIQ--AGLFNTTSTAQD-RREMLKEIMRRGT 599
G+D V+Q +G N T+ Q ++ +++++R+G
Sbjct: 1434 GLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKGA 1469
>sp|B0R0I6|CHD8_DANRE Chromodomain-helicase-DNA-binding protein 8 OS=Danio rerio GN=chd8
PE=3 SV=2
Length = 2511
Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/528 (39%), Positives = 324/528 (61%), Gaps = 43/528 (8%)
Query: 101 EKVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLEN 160
+K+ E G +LR YQLEG+ W+L + N N ILADEMGLGKTIQ+IAL++ + +
Sbjct: 833 KKLDESTEYKNGNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIALLSEMF-S 891
Query: 161 KGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMRE-EFFS--ERG--- 214
GV P +I+AP + + NW EFS W + A+VY G R+ +++ E + ++G
Sbjct: 892 AGVQSPFMIIAPLSTITNWEREFSNWT-DMNAIVYHGSLASRQMIQQYEMYCKDDKGHLI 950
Query: 215 ----RFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLL 270
+F+ LIT +++I+ D L+++ W +++DE HRLKN C L ++ +I+ ++L
Sbjct: 951 PGAYKFDALITTFEMILSDCPELREISWRCVVIDEAHRLKNRNCKLLDSLKMLEIEHKVL 1010
Query: 271 LTGTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLH 330
LTGTP+QN+++EL+SLL+FL P F S F F L EEQ +++L
Sbjct: 1011 LTGTPLQNTVEELFSLLHFLEPAQFPSEIEFLREFGD---------LKTEEQ---VQKLQ 1058
Query: 331 HVIRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKSL 390
+++P +LRR K++VEK L K + I++ +++ QK YY+ + + L G ++ ++
Sbjct: 1059 SILKPMMLRRLKEDVEKNLAPKQETIIEVELTDVQKKYYRAILERNFSFLSMGATQNSNV 1118
Query: 391 QNL---SMQLRKCCNHPYLFVGE-----------YNM----WRKEEIIRASGKFELLDRL 432
NL M+LRKCCNHPYL G Y+ + + ++R++GK LLD+L
Sbjct: 1119 PNLLNTMMELRKCCNHPYLITGAEEKIVSELREVYDPLAPDFHLQALVRSAGKLVLLDKL 1178
Query: 433 LPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSP 492
LP+L+ GH+VL+FSQM R +DILE YL + + R+DG + R + +F+ PDS
Sbjct: 1179 LPRLKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSD 1238
Query: 493 YFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVG 552
F+FLL TRAGGLG+NL ADT +IFDSDWNPQ D QA+ R HRIGQ K V+V+ L++
Sbjct: 1239 RFVFLLCTRAGGLGINLTAADTCVIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRN 1298
Query: 553 SIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQD-RREMLKEIMRRGT 599
S E +L++A K+G+D V+Q+ N S+ Q ++ +++++R+G
Sbjct: 1299 SYEREMLDKASLKLGLDRAVLQSMSGNKESSIQQFSKKEIEDLLRKGA 1346
>sp|Q09XV5|CHD8_MOUSE Chromodomain-helicase-DNA-binding protein 8 OS=Mus musculus GN=Chd8
PE=1 SV=1
Length = 2582
Score = 384 bits (986), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/516 (40%), Positives = 316/516 (61%), Gaps = 44/516 (8%)
Query: 114 ELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVAPK 173
+LR YQLEG+ W+L + N N ILADEMGLGKTIQ+IA + + N G+ GP +++AP
Sbjct: 812 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPL 870
Query: 174 AVLPNWINEFSTWAPSIAAVVYDGRPDERKAMRE-EFFSE--RGR-------FNVLITHY 223
+ + NW EF+TW + +VY G R+ +++ E + + RGR F+ LIT +
Sbjct: 871 STITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTF 929
Query: 224 DLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQEL 283
++I+ D L++++W +I+DE HRLKN C L ++ ++ ++LLTGTP+QN+++EL
Sbjct: 930 EMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEEL 989
Query: 284 WSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKD 343
+SLL+FL P+ F S F KD G L EEQ +++L +++P +LRR K+
Sbjct: 990 FSLLHFLEPSQFPSESEF-------LKDFGD--LKTEEQ---VQKLQAILKPMMLRRLKE 1037
Query: 344 EVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKS--KSLQNLSMQLRKCC 401
+VEK L K + I++ +++ QK YY+ + + L G G + +L N M+LRKCC
Sbjct: 1038 DVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCC 1097
Query: 402 NHPYLFVGEYNM---------------WRKEEIIRASGKFELLDRLLPKLRKSGHRVLLF 446
NHPYL G + + ++R++GK L+D+LLPKL+ GH+VL+F
Sbjct: 1098 NHPYLINGAEEKILMEFREACHIIPQDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIF 1157
Query: 447 SQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLG 506
SQM R +DILE YL + + R+DG + R + +F+ PDS F+FLL TRAGGLG
Sbjct: 1158 SQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLG 1217
Query: 507 LNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKM 566
+NL ADT IIFDSDWNPQ D QA+ R HRIGQ K V+V+ L++ S E + ++A K+
Sbjct: 1218 INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKL 1277
Query: 567 GIDAKVIQAGL---FNTTSTAQDRREMLKEIMRRGT 599
G+D V+Q+ N T Q ++ +++++R+G
Sbjct: 1278 GLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGA 1313
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 316,314,465
Number of Sequences: 539616
Number of extensions: 14206172
Number of successful extensions: 47701
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 348
Number of HSP's successfully gapped in prelim test: 391
Number of HSP's that attempted gapping in prelim test: 45283
Number of HSP's gapped (non-prelim): 1537
length of query: 832
length of database: 191,569,459
effective HSP length: 126
effective length of query: 706
effective length of database: 123,577,843
effective search space: 87245957158
effective search space used: 87245957158
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)