Query 003313
Match_columns 831
No_of_seqs 380 out of 3540
Neff 8.4
Searched_HMMs 46136
Date Thu Mar 28 21:08:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003313.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003313hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0202 Ca2+ transporting ATPa 100.0 2E-130 3E-135 1088.8 54.3 794 21-822 3-967 (972)
2 KOG0205 Plasma membrane H+-tra 100.0 6E-129 1E-133 1042.1 43.0 826 1-830 1-855 (942)
3 PRK10517 magnesium-transportin 100.0 7E-122 1E-126 1109.7 88.1 779 22-825 49-900 (902)
4 PRK15122 magnesium-transportin 100.0 3E-121 6E-126 1106.5 88.5 787 21-822 26-896 (903)
5 TIGR01647 ATPase-IIIA_H plasma 100.0 2E-121 4E-126 1094.0 83.9 723 40-782 1-753 (755)
6 TIGR01523 ATPase-IID_K-Na pota 100.0 2E-121 5E-126 1118.5 85.4 792 20-822 5-1046(1053)
7 TIGR01524 ATPase-IIIB_Mg magne 100.0 2E-120 4E-125 1098.7 88.6 775 21-822 14-861 (867)
8 COG0474 MgtA Cation transport 100.0 9E-119 2E-123 1085.8 80.5 783 14-807 15-898 (917)
9 TIGR01106 ATPase-IIC_X-K sodiu 100.0 9E-117 2E-121 1081.5 88.1 806 17-824 12-986 (997)
10 TIGR01522 ATPase-IIA2_Ca golgi 100.0 1E-115 2E-120 1063.5 87.2 771 21-822 3-881 (884)
11 TIGR01517 ATPase-IIB_Ca plasma 100.0 3E-115 6E-120 1065.9 86.9 790 26-820 43-938 (941)
12 KOG0204 Calcium transporting A 100.0 1E-118 3E-123 991.7 51.2 786 27-819 103-1004(1034)
13 TIGR01116 ATPase-IIA1_Ca sarco 100.0 8E-107 2E-111 987.9 80.8 752 69-822 1-917 (917)
14 KOG0203 Na+/K+ ATPase, alpha s 100.0 4E-108 1E-112 907.0 36.5 811 19-831 36-1015(1019)
15 TIGR01657 P-ATPase-V P-type AT 100.0 2E-104 4E-109 979.0 73.1 745 38-799 137-1047(1054)
16 TIGR01652 ATPase-Plipid phosph 100.0 5.5E-90 1.2E-94 853.4 64.6 759 53-830 1-1053(1057)
17 PRK14010 potassium-transportin 100.0 6.2E-88 1.3E-92 778.9 55.7 520 71-645 28-588 (673)
18 PLN03190 aminophospholipid tra 100.0 7.3E-85 1.6E-89 798.5 67.9 756 51-830 85-1148(1178)
19 PRK01122 potassium-transportin 100.0 2.9E-85 6.3E-90 757.5 59.6 512 71-634 29-581 (679)
20 KOG0208 Cation transport ATPas 100.0 2.1E-85 4.6E-90 737.2 53.8 676 29-718 149-1012(1140)
21 TIGR01497 kdpB K+-transporting 100.0 2.2E-81 4.7E-86 723.3 57.3 514 71-636 28-584 (675)
22 COG2217 ZntA Cation transport 100.0 5.8E-80 1.2E-84 712.5 56.3 480 100-642 173-681 (713)
23 KOG0207 Cation transport ATPas 100.0 6.2E-76 1.3E-80 662.2 42.3 515 98-666 338-891 (951)
24 PRK11033 zntA zinc/cadmium/mer 100.0 2.9E-74 6.4E-79 685.6 56.7 473 100-639 205-707 (741)
25 KOG0209 P-type ATPase [Inorgan 100.0 3.6E-70 7.9E-75 600.8 53.3 644 11-675 134-991 (1160)
26 TIGR01511 ATPase-IB1_Cu copper 100.0 9.2E-70 2E-74 630.7 57.9 483 100-654 53-560 (562)
27 TIGR01494 ATPase_P-type ATPase 100.0 2E-70 4.3E-75 632.6 50.9 448 108-642 3-483 (499)
28 TIGR01525 ATPase-IB_hvy heavy 100.0 1.2E-69 2.6E-74 631.8 57.4 494 80-640 4-527 (556)
29 TIGR01512 ATPase-IB2_Cd heavy 100.0 1.5E-69 3.3E-74 626.9 54.0 474 80-639 4-505 (536)
30 KOG0206 P-type ATPase [General 100.0 2.3E-72 4.9E-77 664.3 30.3 763 49-827 28-1080(1151)
31 PRK10671 copA copper exporting 100.0 7E-69 1.5E-73 652.3 60.2 503 100-665 285-818 (834)
32 KOG0210 P-type ATPase [Inorgan 100.0 1.4E-70 3.1E-75 593.7 37.1 744 48-831 74-1048(1051)
33 COG2216 KdpB High-affinity K+ 100.0 4.1E-61 8.8E-66 508.0 30.4 497 72-620 29-569 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 4.3E-27 9.3E-32 244.9 21.3 193 107-300 2-230 (230)
35 PF00702 Hydrolase: haloacid d 99.9 1.3E-25 2.7E-30 231.0 11.3 211 304-580 1-215 (215)
36 COG4087 Soluble P-type ATPase 99.6 2.6E-15 5.7E-20 132.8 10.0 122 459-610 20-144 (152)
37 KOG4383 Uncharacterized conser 99.6 1.5E-12 3.3E-17 142.8 31.8 210 457-666 814-1131(1354)
38 PF00690 Cation_ATPase_N: Cati 99.4 1.1E-12 2.3E-17 108.6 7.2 67 22-88 1-69 (69)
39 PF00689 Cation_ATPase_C: Cati 99.3 2.7E-11 5.9E-16 121.2 16.4 166 648-820 1-182 (182)
40 PRK10513 sugar phosphate phosp 99.1 5.1E-10 1.1E-14 119.5 11.5 66 548-613 196-265 (270)
41 COG0561 Cof Predicted hydrolas 99.0 1.2E-09 2.7E-14 116.1 12.2 153 462-614 12-259 (264)
42 PRK01158 phosphoglycolate phos 99.0 1.6E-09 3.4E-14 112.7 12.6 151 463-613 13-226 (230)
43 PRK15126 thiamin pyrimidine py 99.0 6.4E-10 1.4E-14 118.8 9.7 145 469-613 19-259 (272)
44 smart00831 Cation_ATPase_N Cat 99.0 7.4E-10 1.6E-14 90.2 7.5 60 33-92 2-63 (64)
45 TIGR01487 SPP-like sucrose-pho 99.0 1.2E-09 2.6E-14 112.4 10.2 143 469-611 18-214 (215)
46 PRK10976 putative hydrolase; P 99.0 1.7E-09 3.8E-14 115.1 10.7 66 548-613 190-261 (266)
47 PRK11133 serB phosphoserine ph 99.0 2.3E-09 5E-14 115.9 10.3 127 469-613 181-316 (322)
48 TIGR02137 HSK-PSP phosphoserin 99.0 3.9E-09 8.5E-14 106.9 11.3 130 469-615 68-198 (203)
49 TIGR01482 SPP-subfamily Sucros 99.0 4.6E-09 1E-13 108.8 12.0 145 469-613 15-222 (225)
50 PLN02887 hydrolase family prot 98.9 3.9E-09 8.4E-14 122.1 11.3 65 549-613 508-576 (580)
51 PRK10530 pyridoxal phosphate ( 98.9 7.3E-09 1.6E-13 110.6 11.7 66 548-613 199-268 (272)
52 TIGR02726 phenyl_P_delta pheny 98.9 5.7E-09 1.2E-13 102.1 9.2 104 476-608 41-146 (169)
53 PF08282 Hydrolase_3: haloacid 98.9 5.7E-09 1.2E-13 109.6 9.3 146 467-612 13-254 (254)
54 TIGR00338 serB phosphoserine p 98.8 1.7E-08 3.6E-13 104.2 10.2 128 469-611 85-218 (219)
55 PF13246 Hydrolase_like2: Puta 98.8 1E-08 2.2E-13 89.6 7.2 66 350-416 19-90 (91)
56 TIGR01670 YrbI-phosphatas 3-de 98.8 2.2E-08 4.7E-13 97.1 9.4 106 477-611 36-144 (154)
57 TIGR00099 Cof-subfamily Cof su 98.8 2.5E-08 5.3E-13 105.6 9.9 64 548-611 188-255 (256)
58 TIGR01486 HAD-SF-IIB-MPGP mann 98.7 1.2E-07 2.6E-12 100.4 13.9 66 548-613 176-253 (256)
59 COG0560 SerB Phosphoserine pho 98.7 8.9E-08 1.9E-12 97.5 9.9 113 468-599 76-198 (212)
60 PRK03669 mannosyl-3-phosphogly 98.7 1.9E-07 4.2E-12 99.6 12.6 66 548-613 187-265 (271)
61 PRK09484 3-deoxy-D-manno-octul 98.6 1.2E-07 2.6E-12 94.7 8.4 109 476-615 55-171 (183)
62 PRK08238 hypothetical protein; 98.5 2.8E-05 6E-10 88.8 26.4 101 469-593 72-172 (479)
63 COG1778 Low specificity phosph 98.5 2E-07 4.3E-12 86.5 7.3 115 476-621 42-164 (170)
64 PRK13582 thrH phosphoserine ph 98.5 5.5E-07 1.2E-11 91.8 11.1 127 469-612 68-195 (205)
65 PRK00192 mannosyl-3-phosphogly 98.5 5.6E-07 1.2E-11 96.1 11.4 66 548-613 190-267 (273)
66 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.4 7.4E-07 1.6E-11 90.4 9.4 117 469-597 80-200 (201)
67 TIGR03333 salvage_mtnX 2-hydro 98.3 3.6E-06 7.9E-11 86.4 11.2 135 468-613 69-209 (214)
68 TIGR02471 sucr_syn_bact_C sucr 98.3 6.3E-06 1.4E-10 86.0 12.1 66 548-613 159-232 (236)
69 PLN02954 phosphoserine phospha 98.2 1E-05 2.3E-10 83.6 12.4 124 469-610 84-221 (224)
70 PF12710 HAD: haloacid dehalog 98.2 1.9E-06 4.1E-11 86.6 5.9 92 472-577 92-192 (192)
71 KOG1615 Phosphoserine phosphat 98.2 4E-06 8.6E-11 80.5 6.5 109 469-586 88-199 (227)
72 TIGR01485 SPP_plant-cyano sucr 98.1 1.4E-05 3.1E-10 84.1 10.6 146 468-613 20-244 (249)
73 TIGR01489 DKMTPPase-SF 2,3-dik 98.0 1.5E-05 3.3E-10 79.8 8.9 114 468-584 71-186 (188)
74 PRK09552 mtnX 2-hydroxy-3-keto 98.0 1.7E-05 3.7E-10 81.8 9.4 134 469-612 74-212 (219)
75 TIGR01488 HAD-SF-IB Haloacid D 98.0 9.6E-06 2.1E-10 80.4 7.1 101 469-579 73-177 (177)
76 PRK13222 phosphoglycolate phos 98.0 3.8E-05 8.3E-10 79.4 11.1 127 468-614 92-223 (226)
77 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.0 1.8E-05 3.8E-10 80.5 7.6 108 468-587 86-198 (202)
78 COG0546 Gph Predicted phosphat 97.9 6.1E-05 1.3E-09 77.7 10.8 125 467-612 87-217 (220)
79 PLN02382 probable sucrose-phos 97.9 7.9E-05 1.7E-09 83.9 11.9 140 474-613 33-257 (413)
80 TIGR02461 osmo_MPG_phos mannos 97.9 4.4E-05 9.5E-10 78.9 8.9 44 467-510 13-56 (225)
81 TIGR01454 AHBA_synth_RP 3-amin 97.8 9.6E-05 2.1E-09 75.3 10.3 124 469-612 75-203 (205)
82 cd01427 HAD_like Haloacid deha 97.8 5.2E-05 1.1E-09 70.9 6.8 118 465-584 20-138 (139)
83 PRK10187 trehalose-6-phosphate 97.7 0.00011 2.4E-09 78.0 8.6 138 469-612 36-240 (266)
84 TIGR02463 MPGP_rel mannosyl-3- 97.7 0.00028 6E-09 72.8 10.9 38 472-509 19-56 (221)
85 PRK13223 phosphoglycolate phos 97.6 0.00038 8.2E-09 74.3 10.5 125 468-612 100-229 (272)
86 PRK13288 pyrophosphatase PpaX; 97.6 0.00033 7.2E-09 71.9 9.8 124 469-612 82-210 (214)
87 TIGR01449 PGP_bact 2-phosphogl 97.5 0.00038 8.2E-09 71.2 9.4 122 469-610 85-211 (213)
88 PRK12702 mannosyl-3-phosphogly 97.4 0.0011 2.3E-08 69.8 11.1 43 468-510 17-59 (302)
89 PRK10826 2-deoxyglucose-6-phos 97.3 0.00078 1.7E-08 69.5 9.1 121 469-609 92-216 (222)
90 TIGR01544 HAD-SF-IE haloacid d 97.3 0.0027 5.8E-08 66.9 12.9 127 468-612 120-273 (277)
91 TIGR01545 YfhB_g-proteo haloac 97.3 0.00087 1.9E-08 68.5 8.2 107 469-587 94-202 (210)
92 PRK11590 hypothetical protein; 97.2 0.0023 5E-08 65.5 10.6 109 469-589 95-205 (211)
93 TIGR03351 PhnX-like phosphonat 97.2 0.002 4.3E-08 66.3 10.2 124 468-610 86-217 (220)
94 PRK14502 bifunctional mannosyl 97.2 0.0011 2.4E-08 77.2 8.9 40 470-509 434-473 (694)
95 PRK13226 phosphoglycolate phos 97.2 0.0018 3.8E-08 67.3 9.7 124 469-612 95-224 (229)
96 PRK13225 phosphoglycolate phos 97.2 0.0042 9E-08 66.2 12.4 121 469-612 142-267 (273)
97 COG4030 Uncharacterized protei 97.1 0.0058 1.3E-07 60.5 11.3 143 469-613 83-262 (315)
98 PRK14501 putative bifunctional 97.1 0.0024 5.3E-08 77.7 11.0 169 425-612 481-720 (726)
99 PRK13478 phosphonoacetaldehyde 97.1 0.004 8.6E-08 66.3 11.1 96 469-581 101-197 (267)
100 PF05116 S6PP: Sucrose-6F-phos 97.0 0.0031 6.8E-08 66.1 9.7 67 547-613 164-243 (247)
101 TIGR01422 phosphonatase phosph 97.0 0.0049 1.1E-07 65.0 10.9 98 469-583 99-197 (253)
102 PLN03243 haloacid dehalogenase 97.0 0.0043 9.2E-08 65.6 10.2 120 469-608 109-230 (260)
103 TIGR01484 HAD-SF-IIB HAD-super 96.9 0.0025 5.5E-08 64.7 7.7 39 469-507 17-55 (204)
104 PLN02770 haloacid dehalogenase 96.8 0.0069 1.5E-07 63.7 10.6 116 469-602 108-227 (248)
105 TIGR01548 HAD-SF-IA-hyp1 haloa 96.7 0.0022 4.8E-08 64.8 5.3 94 467-579 104-197 (197)
106 COG4359 Uncharacterized conser 96.6 0.0023 4.9E-08 61.4 4.5 112 469-585 73-184 (220)
107 PRK06769 hypothetical protein; 96.6 0.0075 1.6E-07 59.6 8.6 99 470-585 29-135 (173)
108 PRK11587 putative phosphatase; 96.5 0.0099 2.2E-07 61.1 9.1 114 469-601 83-198 (218)
109 TIGR02253 CTE7 HAD superfamily 96.5 0.0091 2E-07 61.4 8.6 98 469-586 94-195 (221)
110 PRK06698 bifunctional 5'-methy 96.5 0.0088 1.9E-07 68.9 9.1 123 469-614 330-455 (459)
111 PRK11009 aphA acid phosphatase 96.5 0.0052 1.1E-07 63.6 6.5 90 469-583 114-207 (237)
112 PLN02779 haloacid dehalogenase 96.4 0.0097 2.1E-07 63.9 8.5 117 469-601 144-263 (286)
113 PLN02580 trehalose-phosphatase 96.4 0.03 6.5E-07 61.8 11.9 68 541-612 291-373 (384)
114 TIGR01672 AphA HAD superfamily 96.3 0.0045 9.7E-08 64.1 4.7 88 470-582 115-206 (237)
115 PRK08942 D,D-heptose 1,7-bisph 96.2 0.028 6.1E-07 55.9 9.9 128 469-613 29-177 (181)
116 PHA02530 pseT polynucleotide k 96.2 0.012 2.6E-07 63.7 7.7 109 466-584 184-293 (300)
117 TIGR01428 HAD_type_II 2-haloal 96.1 0.014 3E-07 58.9 7.4 96 469-584 92-189 (198)
118 TIGR01662 HAD-SF-IIIA HAD-supe 96.1 0.028 6.1E-07 52.6 8.6 93 468-582 24-126 (132)
119 PRK14988 GMP/IMP nucleotidase; 96.0 0.015 3.2E-07 60.2 7.1 101 469-587 93-195 (224)
120 PLN02575 haloacid dehalogenase 96.0 0.034 7.4E-07 61.5 10.0 120 469-608 216-337 (381)
121 smart00775 LNS2 LNS2 domain. T 95.9 0.033 7.1E-07 54.0 8.5 104 467-582 25-141 (157)
122 TIGR02254 YjjG/YfnB HAD superf 95.9 0.023 5.1E-07 58.4 7.9 121 469-610 97-222 (224)
123 PF13419 HAD_2: Haloacid dehal 95.9 0.0073 1.6E-07 59.0 3.9 96 469-582 77-172 (176)
124 PTZ00174 phosphomannomutase; P 95.8 0.0066 1.4E-07 63.8 3.3 58 543-600 181-245 (247)
125 TIGR01990 bPGM beta-phosphoglu 95.8 0.013 2.8E-07 58.3 5.3 94 469-582 87-180 (185)
126 TIGR01509 HAD-SF-IA-v3 haloaci 95.6 0.031 6.8E-07 55.3 7.4 94 469-581 85-178 (183)
127 TIGR02009 PGMB-YQAB-SF beta-ph 95.6 0.017 3.7E-07 57.4 5.4 92 469-582 88-181 (185)
128 PLN02940 riboflavin kinase 95.4 0.039 8.5E-07 61.8 7.9 114 469-600 93-210 (382)
129 TIGR01668 YqeG_hyp_ppase HAD s 95.4 0.061 1.3E-06 53.0 8.2 111 431-583 20-132 (170)
130 PRK09449 dUMP phosphatase; Pro 95.4 0.059 1.3E-06 55.5 8.5 123 469-612 95-222 (224)
131 TIGR00213 GmhB_yaeD D,D-heptos 95.3 0.067 1.4E-06 53.0 8.4 125 470-608 27-174 (176)
132 TIGR01685 MDP-1 magnesium-depe 95.2 0.075 1.6E-06 52.3 8.1 111 460-585 36-155 (174)
133 TIGR01656 Histidinol-ppas hist 95.1 0.042 9.1E-07 52.7 5.8 98 469-583 27-141 (147)
134 PLN03017 trehalose-phosphatase 94.9 0.41 9E-06 52.5 13.6 61 429-503 104-166 (366)
135 TIGR01261 hisB_Nterm histidino 94.7 0.062 1.3E-06 52.3 6.0 100 469-585 29-145 (161)
136 TIGR01459 HAD-SF-IIA-hyp4 HAD- 94.6 0.33 7.2E-06 50.7 11.8 94 462-580 17-115 (242)
137 TIGR01533 lipo_e_P4 5'-nucleot 94.6 0.14 3.1E-06 53.9 8.8 85 468-576 117-204 (266)
138 TIGR01549 HAD-SF-IA-v1 haloaci 94.5 0.042 9.1E-07 52.9 4.2 90 470-580 65-154 (154)
139 PLN02205 alpha,alpha-trehalose 94.4 0.21 4.6E-06 61.5 10.8 68 425-505 585-653 (854)
140 TIGR02252 DREG-2 REG-2-like, H 94.2 0.093 2E-06 53.1 6.4 95 469-582 105-200 (203)
141 smart00577 CPDc catalytic doma 94.2 0.067 1.5E-06 51.3 4.9 97 468-585 44-140 (148)
142 COG3769 Predicted hydrolase (H 94.1 0.38 8.1E-06 48.0 9.8 37 473-509 27-63 (274)
143 PF06888 Put_Phosphatase: Puta 94.1 0.31 6.7E-06 50.3 9.8 104 469-576 71-186 (234)
144 COG2179 Predicted hydrolase of 94.0 0.32 6.8E-06 46.6 8.7 110 428-582 20-133 (175)
145 PLN02811 hydrolase 93.8 0.14 3.1E-06 52.6 6.8 101 469-585 78-182 (220)
146 PRK05446 imidazole glycerol-ph 93.4 0.15 3.2E-06 56.1 6.3 98 469-585 30-146 (354)
147 TIGR01691 enolase-ppase 2,3-di 93.3 0.18 3.9E-06 51.8 6.5 99 467-585 93-194 (220)
148 TIGR00685 T6PP trehalose-phosp 93.1 0.13 2.7E-06 54.0 5.2 64 545-612 164-239 (244)
149 PRK10563 6-phosphogluconate ph 92.6 0.095 2.1E-06 53.9 3.3 97 469-585 88-184 (221)
150 PLN02919 haloacid dehalogenase 92.6 0.52 1.1E-05 59.8 10.3 127 470-613 162-292 (1057)
151 TIGR01664 DNA-3'-Pase DNA 3'-p 92.5 0.31 6.8E-06 47.7 6.7 94 470-583 43-158 (166)
152 TIGR01681 HAD-SF-IIIC HAD-supe 92.4 0.38 8.3E-06 44.8 6.8 39 469-507 29-68 (128)
153 TIGR01675 plant-AP plant acid 92.1 0.53 1.1E-05 48.3 7.9 88 468-574 119-210 (229)
154 KOG3120 Predicted haloacid deh 91.5 0.92 2E-05 45.4 8.4 104 469-585 84-208 (256)
155 TIGR02247 HAD-1A3-hyp Epoxide 91.2 0.19 4E-06 51.3 3.5 98 468-583 93-192 (211)
156 TIGR01517 ATPase-IIB_Ca plasma 90.6 52 0.0011 41.7 25.0 64 103-166 134-207 (941)
157 TIGR01686 FkbH FkbH-like domai 90.6 0.5 1.1E-05 51.6 6.4 91 469-586 31-129 (320)
158 PF09419 PGP_phosphatase: Mito 89.8 0.76 1.6E-05 44.8 6.1 107 431-580 36-157 (168)
159 PLN02645 phosphoglycolate phos 89.3 0.87 1.9E-05 49.5 7.0 48 462-509 37-87 (311)
160 PRK09456 ?-D-glucose-1-phospha 88.9 0.55 1.2E-05 47.4 4.8 98 469-584 84-182 (199)
161 PLN02151 trehalose-phosphatase 88.4 4.6 0.0001 44.3 11.6 66 543-612 261-341 (354)
162 TIGR01993 Pyr-5-nucltdase pyri 86.3 0.83 1.8E-05 45.3 4.2 98 469-583 84-181 (184)
163 PRK10725 fructose-1-P/6-phosph 86.1 1.3 2.7E-05 44.0 5.4 91 474-583 92-182 (188)
164 PF13344 Hydrolase_6: Haloacid 85.9 0.62 1.3E-05 41.5 2.7 48 462-509 7-57 (101)
165 PF08235 LNS2: LNS2 (Lipin/Ned 84.1 3.7 7.9E-05 39.5 7.2 103 468-582 26-141 (157)
166 PF03767 Acid_phosphat_B: HAD 83.6 2.2 4.8E-05 44.1 6.0 89 469-575 115-207 (229)
167 PHA02597 30.2 hypothetical pro 82.9 2.3 5.1E-05 42.6 5.8 91 469-584 74-171 (197)
168 PLN02177 glycerol-3-phosphate 82.7 3.9 8.5E-05 47.3 8.1 102 470-587 111-215 (497)
169 TIGR01689 EcbF-BcbF capsule bi 81.8 2.3 5E-05 39.5 4.7 32 468-499 23-54 (126)
170 TIGR01452 PGP_euk phosphoglyco 80.7 14 0.0003 39.5 11.0 48 462-509 11-61 (279)
171 TIGR02251 HIF-SF_euk Dullard-l 78.9 1.5 3.2E-05 42.8 2.6 92 469-584 42-136 (162)
172 TIGR01684 viral_ppase viral ph 78.1 3.3 7.2E-05 43.9 5.0 41 470-510 146-187 (301)
173 PRK14194 bifunctional 5,10-met 78.0 6.1 0.00013 42.4 7.1 137 466-602 12-209 (301)
174 PLN02423 phosphomannomutase 76.9 3.3 7.1E-05 43.4 4.7 41 548-589 189-234 (245)
175 COG0637 Predicted phosphatase/ 76.7 5.2 0.00011 41.1 6.0 100 468-585 85-184 (221)
176 PRK10444 UMP phosphatase; Prov 76.6 2.6 5.6E-05 44.2 3.8 45 462-506 10-54 (248)
177 COG1011 Predicted hydrolase (H 76.2 6.2 0.00013 40.3 6.5 120 469-612 99-226 (229)
178 TIGR01457 HAD-SF-IIA-hyp2 HAD- 75.5 4.8 0.0001 42.2 5.5 48 462-509 10-60 (249)
179 TIGR01458 HAD-SF-IIA-hyp3 HAD- 75.4 3.2 7E-05 43.7 4.2 48 462-509 10-64 (257)
180 COG0241 HisB Histidinol phosph 75.0 4.7 0.0001 39.8 4.8 98 470-585 32-146 (181)
181 PHA03398 viral phosphatase sup 74.6 4.9 0.00011 42.8 5.1 41 470-510 148-189 (303)
182 TIGR01680 Veg_Stor_Prot vegeta 71.5 22 0.00047 37.6 8.9 30 468-497 144-173 (275)
183 PRK10748 flavin mononucleotide 71.1 6.2 0.00013 41.0 5.0 91 469-585 113-206 (238)
184 PRK14188 bifunctional 5,10-met 68.8 15 0.00033 39.4 7.4 137 466-602 10-208 (296)
185 PTZ00174 phosphomannomutase; P 67.3 7.4 0.00016 40.7 4.7 36 469-504 22-57 (247)
186 PF05822 UMPH-1: Pyrimidine 5' 67.2 47 0.001 34.6 10.2 134 468-612 89-241 (246)
187 TIGR01493 HAD-SF-IA-v2 Haloaci 66.4 8.2 0.00018 37.7 4.6 85 469-578 90-174 (175)
188 PRK14174 bifunctional 5,10-met 66.3 19 0.00042 38.6 7.5 137 466-602 9-213 (295)
189 PRK14179 bifunctional 5,10-met 65.9 17 0.00038 38.6 7.1 136 467-602 11-208 (284)
190 KOG3040 Predicted sugar phosph 65.2 12 0.00026 37.3 5.2 51 459-509 13-66 (262)
191 TIGR01663 PNK-3'Pase polynucle 64.9 14 0.00031 43.0 6.7 40 470-509 198-249 (526)
192 COG3700 AphA Acid phosphatase 64.6 4.4 9.4E-05 39.2 2.0 90 470-585 115-210 (237)
193 PRK14191 bifunctional 5,10-met 64.5 20 0.00043 38.3 7.1 137 466-602 9-207 (285)
194 PRK14170 bifunctional 5,10-met 62.8 22 0.00047 37.9 7.0 137 466-602 10-207 (284)
195 PRK14184 bifunctional 5,10-met 61.9 21 0.00046 38.0 6.8 137 466-602 9-211 (286)
196 PRK14169 bifunctional 5,10-met 61.4 23 0.00051 37.6 7.0 136 467-602 10-206 (282)
197 PRK14189 bifunctional 5,10-met 60.8 25 0.00055 37.4 7.1 137 466-602 11-208 (285)
198 TIGR01458 HAD-SF-IIA-hyp3 HAD- 59.6 14 0.0003 39.0 5.0 118 472-611 123-253 (257)
199 PRK14182 bifunctional 5,10-met 57.2 32 0.0007 36.6 7.2 137 466-602 9-207 (282)
200 PTZ00445 p36-lilke protein; Pr 55.1 21 0.00046 36.1 5.1 63 422-497 29-103 (219)
201 PRK14172 bifunctional 5,10-met 54.9 36 0.00078 36.2 7.1 137 466-602 10-208 (278)
202 PF06506 PrpR_N: Propionate ca 54.4 45 0.00097 32.8 7.4 106 473-624 65-172 (176)
203 PRK14190 bifunctional 5,10-met 53.8 27 0.00059 37.2 6.0 137 466-602 11-208 (284)
204 TIGR02244 HAD-IG-Ncltidse HAD 53.1 48 0.001 36.4 7.9 37 471-507 186-223 (343)
205 COG0647 NagD Predicted sugar p 52.6 15 0.00032 38.9 3.7 46 461-506 16-61 (269)
206 PRK14186 bifunctional 5,10-met 51.6 35 0.00075 36.7 6.4 137 466-602 10-208 (297)
207 PLN02897 tetrahydrofolate dehy 51.5 41 0.0009 36.7 7.0 138 465-602 63-264 (345)
208 PRK14175 bifunctional 5,10-met 50.7 23 0.00049 37.9 4.8 137 466-602 11-208 (286)
209 PRK14167 bifunctional 5,10-met 50.3 24 0.00051 37.9 4.9 137 466-602 10-211 (297)
210 COG1877 OtsB Trehalose-6-phosp 50.0 1.3E+02 0.0028 31.8 10.3 69 429-508 11-80 (266)
211 COG0190 FolD 5,10-methylene-te 49.4 50 0.0011 35.0 7.0 136 467-602 9-206 (283)
212 PRK14185 bifunctional 5,10-met 48.6 50 0.0011 35.4 6.9 137 466-602 9-211 (293)
213 PRK14176 bifunctional 5,10-met 48.4 49 0.0011 35.3 6.8 137 465-601 15-213 (287)
214 PF12689 Acid_PPase: Acid Phos 47.7 31 0.00068 33.7 4.9 86 469-571 45-135 (169)
215 TIGR02250 FCP1_euk FCP1-like p 46.7 50 0.0011 31.8 6.2 41 469-510 58-98 (156)
216 TIGR01456 CECR5 HAD-superfamil 46.6 59 0.0013 35.5 7.5 49 461-509 8-64 (321)
217 PLN02616 tetrahydrofolate dehy 45.3 54 0.0012 36.1 6.7 139 464-602 79-281 (364)
218 PLN03190 aminophospholipid tra 44.9 2.7E+02 0.0059 36.2 13.9 113 48-166 90-212 (1178)
219 PRK14166 bifunctional 5,10-met 44.8 35 0.00075 36.4 5.1 136 467-602 10-207 (282)
220 PRK15122 magnesium-transportin 43.5 7.9E+02 0.017 31.1 26.5 74 106-180 119-208 (903)
221 PRK14178 bifunctional 5,10-met 42.2 62 0.0013 34.4 6.4 72 531-602 121-202 (279)
222 PF00389 2-Hacid_dh: D-isomer 41.6 1.5E+02 0.0033 27.3 8.5 36 550-586 52-89 (133)
223 PF13380 CoA_binding_2: CoA bi 41.4 34 0.00073 31.2 3.9 40 470-509 64-104 (116)
224 PF13242 Hydrolase_like: HAD-h 41.0 42 0.00091 27.6 4.1 50 551-600 12-69 (75)
225 PRK14180 bifunctional 5,10-met 39.8 44 0.00095 35.6 4.9 137 466-602 9-208 (282)
226 PRK14187 bifunctional 5,10-met 39.5 88 0.0019 33.6 7.1 137 466-602 10-210 (294)
227 PF01455 HupF_HypC: HupF/HypC 39.0 71 0.0015 26.1 4.9 32 137-168 16-50 (68)
228 PF15584 Imm44: Immunity prote 37.3 16 0.00035 31.4 0.9 20 158-177 13-32 (94)
229 PRK14171 bifunctional 5,10-met 37.3 99 0.0021 33.1 7.0 64 539-602 136-209 (288)
230 PF12710 HAD: haloacid dehalog 36.8 17 0.00036 35.9 1.2 14 307-320 1-14 (192)
231 PRK14168 bifunctional 5,10-met 36.4 87 0.0019 33.7 6.5 137 466-602 11-215 (297)
232 PF03120 DNA_ligase_OB: NAD-de 36.3 19 0.00042 30.6 1.3 22 151-172 45-67 (82)
233 COG2503 Predicted secreted aci 36.3 1.6E+02 0.0034 30.6 7.8 84 470-577 123-210 (274)
234 KOG3085 Predicted hydrolase (H 36.0 79 0.0017 32.8 5.9 103 472-595 116-222 (237)
235 PRK14193 bifunctional 5,10-met 35.7 50 0.0011 35.2 4.6 137 466-602 11-210 (284)
236 PRK11507 ribosome-associated p 35.6 46 0.001 27.3 3.3 26 141-166 38-63 (70)
237 PRK14183 bifunctional 5,10-met 35.2 54 0.0012 34.9 4.7 136 467-602 10-207 (281)
238 TIGR01460 HAD-SF-IIA Haloacid 35.1 76 0.0016 32.8 5.8 48 462-509 7-58 (236)
239 TIGR01459 HAD-SF-IIA-hyp4 HAD- 34.9 23 0.00051 36.8 2.0 92 471-583 140-237 (242)
240 PF14336 DUF4392: Domain of un 34.9 76 0.0017 34.1 5.9 37 473-509 64-101 (291)
241 PRK15424 propionate catabolism 33.9 3.8E+02 0.0083 31.6 11.8 70 473-571 95-165 (538)
242 PRK05585 yajC preprotein trans 33.9 1.2E+02 0.0025 27.3 5.9 24 120-143 37-60 (106)
243 PF05568 ASFV_J13L: African sw 33.1 1E+02 0.0022 28.7 5.4 32 121-152 52-83 (189)
244 PF12368 DUF3650: Protein of u 32.7 36 0.00079 22.5 1.8 15 38-52 13-27 (28)
245 PRK04980 hypothetical protein; 32.6 55 0.0012 29.1 3.5 45 136-185 17-63 (102)
246 PRK10792 bifunctional 5,10-met 32.5 61 0.0013 34.6 4.5 137 466-602 11-209 (285)
247 PRK14177 bifunctional 5,10-met 32.2 68 0.0015 34.2 4.9 137 466-602 11-209 (284)
248 TIGR01106 ATPase-IIC_X-K sodiu 32.1 1.2E+03 0.026 29.9 21.4 64 104-167 110-183 (997)
249 COG0279 GmhA Phosphoheptose is 31.0 1.1E+02 0.0024 29.7 5.6 59 421-503 96-154 (176)
250 COG0309 HypE Hydrogenase matur 29.8 2E+02 0.0043 31.4 7.8 85 463-568 219-307 (339)
251 PF13275 S4_2: S4 domain; PDB: 29.6 28 0.00061 28.2 1.1 24 141-164 34-57 (65)
252 TIGR02329 propionate_PrpR prop 29.2 5.1E+02 0.011 30.4 11.8 102 473-621 85-188 (526)
253 COG1188 Ribosome-associated he 28.8 62 0.0014 28.5 3.2 29 141-170 35-63 (100)
254 cd02071 MM_CoA_mut_B12_BD meth 28.7 85 0.0018 28.7 4.4 80 430-509 22-104 (122)
255 COG5547 Small integral membran 28.6 2.9E+02 0.0063 21.7 6.2 48 69-124 3-52 (62)
256 KOG2914 Predicted haloacid-hal 28.3 1.3E+02 0.0029 30.8 6.0 38 470-507 93-130 (222)
257 TIGR01452 PGP_euk phosphoglyco 27.4 2.4E+02 0.0052 29.9 8.2 35 550-584 209-244 (279)
258 PF02358 Trehalose_PPase: Treh 26.6 56 0.0012 33.7 3.1 57 547-603 164-234 (235)
259 cd05017 SIS_PGI_PMI_1 The memb 26.6 87 0.0019 28.4 4.0 35 472-508 57-91 (119)
260 PLN02516 methylenetetrahydrofo 26.4 1.5E+02 0.0033 31.9 6.3 63 540-602 145-217 (299)
261 CHL00200 trpA tryptophan synth 25.7 2.9E+02 0.0062 29.2 8.2 30 546-575 187-216 (263)
262 cd00860 ThrRS_anticodon ThrRS 24.8 1.1E+02 0.0023 25.8 4.1 46 464-509 7-53 (91)
263 PF11694 DUF3290: Protein of u 24.6 2.6E+02 0.0057 26.7 6.9 20 147-166 97-116 (149)
264 PRK10234 DNA-binding transcrip 24.4 4.6E+02 0.01 24.0 8.0 62 109-179 11-73 (118)
265 cd02067 B12-binding B12 bindin 24.2 1.2E+02 0.0026 27.4 4.5 80 429-509 21-104 (119)
266 PRK14173 bifunctional 5,10-met 24.1 1.8E+02 0.004 31.1 6.4 63 540-602 133-205 (287)
267 TIGR00640 acid_CoA_mut_C methy 24.0 5.7E+02 0.012 23.8 9.0 103 459-590 5-115 (132)
268 PRK02261 methylaspartate mutas 23.2 95 0.002 29.2 3.6 80 430-509 26-114 (137)
269 PLN02423 phosphomannomutase 22.6 98 0.0021 32.2 4.1 30 469-499 24-53 (245)
270 PRK08433 flagellar motor switc 22.5 51 0.0011 29.8 1.6 27 149-175 38-64 (111)
271 PRK15108 biotin synthase; Prov 22.1 4.9E+02 0.011 28.6 9.6 85 472-571 111-198 (345)
272 TIGR01501 MthylAspMutase methy 21.6 1.4E+02 0.0029 28.1 4.3 80 430-509 24-112 (134)
273 PF10777 YlaC: Inner membrane 21.2 2E+02 0.0044 27.3 5.2 50 760-816 33-82 (155)
274 PRK04302 triosephosphate isome 21.1 5.1E+02 0.011 26.4 9.0 100 472-589 101-205 (223)
275 PLN02591 tryptophan synthase 21.0 3.1E+02 0.0067 28.8 7.2 33 546-578 174-209 (250)
276 PRK14181 bifunctional 5,10-met 20.9 3E+02 0.0066 29.4 7.2 63 540-602 131-207 (287)
277 PF02699 YajC: Preprotein tran 20.4 1.3E+02 0.0028 25.5 3.6 14 154-167 35-48 (82)
278 PF07287 DUF1446: Protein of u 20.3 2.5E+02 0.0054 31.2 6.7 103 470-602 56-167 (362)
279 PRK05886 yajC preprotein trans 20.1 3E+02 0.0065 24.8 5.9 23 123-145 26-48 (109)
No 1
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-130 Score=1088.79 Aligned_cols=794 Identities=27% Similarity=0.398 Sum_probs=649.6
Q ss_pred ccccCCHHHHHHHhCCC-CCCCCHHHHHHHHHhcCCCccCCC-CCcHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCC
Q 003313 21 DLARLPLDEVFGQLGTT-RQGLSSEDAEVRLKFFGSNKLEKK-PENKFLKFLSFMWNPLSWVMETAALMAIALANGGGQG 98 (831)
Q Consensus 21 ~~~~~~~~~~~~~l~~~-~~GLs~~~~~~r~~~~G~N~i~~~-~~~~~~~~~~~~~~~~~~~l~i~ail~~~~~~~~~~~ 98 (831)
+.|..+++|++..|.++ ++|||++|+.+|+++||+|+++.. ..+.|+.+++||.+++..+|+++|++|+.+.
T Consensus 3 ~~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~------ 76 (972)
T KOG0202|consen 3 EAHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA------ 76 (972)
T ss_pred chhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH------
Confidence 45678999999999999 889999999999999999999875 4789999999999999999999999999987
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEeCCCcCCCcEEEEcCCCccccceEEEe
Q 003313 99 PDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLE 178 (831)
Q Consensus 99 ~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~ 178 (831)
.|.+++.|.++++++..++++||||++|++++|+++.|+.++|+|+|+.+.+++++|||||||.|+-||+||||.++++
T Consensus 77 -~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e 155 (972)
T KOG0202|consen 77 -DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIE 155 (972)
T ss_pred -hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEe
Confidence 7889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEcccccCCCccccccC--------------CCeeeecceeee-----------ccchhhhHHHhhhccC-ccCc
Q 003313 179 GDPLKIDQSELTGESLTVTKET--------------GDEVFSGLTCKH-----------VHSFFGKAADLVDSTE-VVGH 232 (831)
Q Consensus 179 g~~~~Vdes~LTGEs~pv~K~~--------------g~~v~aGt~v~~-----------~~t~~g~~~~~~~~~~-~~~~ 232 (831)
..++.+|||+|||||.|+.|.. .+++|+||.|.. .+|++|++.+.+++.+ .++|
T Consensus 156 ~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTP 235 (972)
T KOG0202|consen 156 AKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTP 235 (972)
T ss_pred eeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCc
Confidence 9899999999999999999953 258999999887 8999999999998886 6999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--Hhhh---c-hhhHh-------h-----------HHH-HHHHHHHHHHHhhhc
Q 003313 233 FQQVLTSIGNFCICFITVGMILEIIV--MFPI---Q-HRLYR-------D-----------RIN-MLSVTLAIASYRLSQ 287 (831)
Q Consensus 233 l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~-~~~~~-------~-----------~l~-~l~~~l~~~~~~l~~ 287 (831)
+|+.++.+++.+.-.+.++.+..+++ .++. + +.++. . +++ +++++||+|.+||+|
T Consensus 236 Lqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMak 315 (972)
T KOG0202|consen 236 LQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMAK 315 (972)
T ss_pred HHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHHh
Confidence 99999999987553332323332322 1111 1 11111 1 111 788999999999999
Q ss_pred CceEEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeecC-----------CCC------------------Ch--
Q 003313 288 RGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFN-----------RDM------------------DK-- 336 (831)
Q Consensus 288 ~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~-----------~~~------------------~~-- 336 (831)
++++||++.++|+||.+++||+|||||||+|+|.+.++++.... .++ ..
T Consensus 316 knaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~ 395 (972)
T KOG0202|consen 316 KNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDL 395 (972)
T ss_pred hhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccHH
Confidence 99999999999999999999999999999999999998752110 000 11
Q ss_pred -HHHHHHHHHhccc-----------cCCChHHHHHHHHhCC-----hH---H-----------HhhccceeEEecCCCCC
Q 003313 337 -DILVLLAARASRL-----------ENQDAIDAAIINMLAD-----PK---E-----------ARANINEVHFLPFNPVD 385 (831)
Q Consensus 337 -~~~l~~a~~~~~~-----------~~~~~~~~ai~~~~~~-----~~---~-----------~~~~~~~l~~~~f~s~~ 385 (831)
.+++..++.|+.. ..+.|.|.|+...+.. .. . ....++.+.++||+++|
T Consensus 396 l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdr 475 (972)
T KOG0202|consen 396 LQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDR 475 (972)
T ss_pred HHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeeccccc
Confidence 1234444444321 1357899998876521 11 0 12233456899999999
Q ss_pred ceEEEEEEcCCCc--EEEEEccchHHHhhhccC------------chhhHHHHHHHHHHHHhccCeeeeeeeecCCCC--
Q 003313 386 KRTAITYTDSEGN--WYRASKGAPEQILNMCQE------------KEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEM-- 449 (831)
Q Consensus 386 k~~sv~v~~~~g~--~~~~~kGa~e~i~~~~~~------------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~-- 449 (831)
|+||+.+.+..|+ +..|+|||+|.|+++|+. ++..++.+.+...+|+++|+|+|++|+++.+..
T Consensus 476 K~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~ 555 (972)
T KOG0202|consen 476 KSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVP 555 (972)
T ss_pred ceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccCh
Confidence 9999999876554 688999999999999953 245678899999999999999999999976631
Q ss_pred ---------CCCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCC--CCCccc
Q 003313 450 ---------TEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNM--YPSSLL 518 (831)
Q Consensus 450 ---------~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~--~~~~~~ 518 (831)
.+...|+||+|+|++++.||||++++++|+.|+++||+|+|+|||+..||.+||+++|+..+. .....+
T Consensus 556 ~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~ 635 (972)
T KOG0202|consen 556 DDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMAL 635 (972)
T ss_pred hhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcccccccc
Confidence 245689999999999999999999999999999999999999999999999999999997543 355789
Q ss_pred cCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEec-CchHHHhhhcC
Q 003313 519 LGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVA-GATEAARGAAD 597 (831)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~-~~~~~a~~aad 597 (831)
.|.++|.+++++++.......+|+|++|.||.+||+.||++|++|+|+|||+||+||||.|||||||| +|||+||+|||
T Consensus 636 TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsD 715 (972)
T KOG0202|consen 636 TGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASD 715 (972)
T ss_pred chhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred EEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhccCCCChHHHHHHHHhhccc-hhccccCCC
Q 003313 598 IVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFV-LLALIWEYDFPPFMVLIIAVLNDGT-IITISKGRV 675 (831)
Q Consensus 598 ivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~ 675 (831)
+||.||||++|+.|+++||.+|.||++|+.|+++.|+..+..++ .+.+..|.|++|+|+||+|+++|++ +.+|+++++
T Consensus 716 MVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep~ 795 (972)
T KOG0202|consen 716 MVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFEPV 795 (972)
T ss_pred cEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCCCC
Confidence 99999999999999999999999999999999999997655544 4567789999999999999999997 699999998
Q ss_pred CCC---CCCCccc----hHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hccc-c---cccc--ccCC---C---cHHHHH
Q 003313 676 KSS---LRPDGWK----LNEIFAAGIVIGNYLALVTILFYWVVVHT--DFFE-T---HFHV--RSLS---S---NTEEIS 734 (831)
Q Consensus 676 ~~~---~~~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~-~---~~~~--~~~~---~---~~~~~~ 734 (831)
++. ++|++.+ ...++.+++..|.+..+.++..|++.+.. +-.. + +|.. .++. . ......
T Consensus 796 D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~~~~ 875 (972)
T KOG0202|consen 796 DPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHYNSCCRDFYGSRCAVFEDMCPL 875 (972)
T ss_pred ChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcchhhhcccccccchhhhcccccc
Confidence 875 2333332 34566667777988888887555443321 0000 0 0000 0000 0 000123
Q ss_pred HHHHHHHHHHHHHHhhhhccCCCCCCc---CchHHHHHHHHHHHHHHHHHHHhhh--cccccccchhHHHHHHHHHHHHH
Q 003313 735 SAVHLQVSIISQALIFVTRSQSWSFLE---RPGALLMCAFVLAQLVATLIAVYAH--ISFAYISGIGWGWAGVIWLYSLV 809 (831)
Q Consensus 735 t~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 809 (831)
|++|..+++..+++.+++|++..+.+. +.|.|+.+++.++++..+++ +|.+ ...|++.+++|.-|++++.++..
T Consensus 876 tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f~i-lYvp~l~~iFq~~~l~~~ew~~vl~~s~~ 954 (972)
T KOG0202|consen 876 TMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLHFLV-LYVPPLQRIFQTEPLSLAEWLLVLAISSP 954 (972)
T ss_pred eEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHhhheE-EEechhhhhheecCCcHHHHHHHHHHhhh
Confidence 778888889999999999998754332 22447777887777665444 5654 34577888888877777899999
Q ss_pred HHHHHHHHHHHHH
Q 003313 810 FYILLDIIKFTVR 822 (831)
Q Consensus 810 ~~~~~e~~k~~~r 822 (831)
+++++|++|++.|
T Consensus 955 V~i~dEilK~~~R 967 (972)
T KOG0202|consen 955 VIIVDEILKFIAR 967 (972)
T ss_pred hhhHHHHHHHHHH
Confidence 9999999999999
No 2
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.5e-129 Score=1042.11 Aligned_cols=826 Identities=73% Similarity=1.141 Sum_probs=782.1
Q ss_pred CCCcCCCCCCCCcccCCCCCccccCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHhHHHHH
Q 003313 1 MPEDLEKPLLDPENCNCGGIDLARLPLDEVFGQLGTTRQGLSSEDAEVRLKFFGSNKLEKKPENKFLKFLSFMWNPLSWV 80 (831)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~ 80 (831)
|-||++. +++.+.++.|....+.|++.++|.++..|||++|+++|+++||+|++.+++.+.+.+|+..|++|+.|+
T Consensus 1 m~e~l~s----~~di~~E~vdl~~~p~eeVfeeL~~t~~GLt~~E~~eRlk~fG~NkleEkken~~lKFl~Fm~~PlswV 76 (942)
T KOG0205|consen 1 MIEELDS----LEDIKKEQVDLEAIPIEEVFEELLCTREGLTSDEVEERLKIFGPNKLEEKKESKFLKFLGFMWNPLSWV 76 (942)
T ss_pred Ccccccc----hhhhhhhccccccCchhhhHHHHhcCCCCCchHHHHHHHHhhCchhhhhhhhhHHHHHHHHHhchHHHH
Confidence 4566665 556666667788999999999999998899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEeCCCcCCCc
Q 003313 81 METAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGD 160 (831)
Q Consensus 81 l~i~ail~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~lv~GD 160 (831)
+..+|++...+..+++.+.+|.+...|.+++++|+.++|++|+++.++..+|++...++++|+|||+|.++++++|||||
T Consensus 77 MEaAAimA~~Lang~~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGD 156 (942)
T KOG0205|consen 77 MEAAAIMAIGLANGGGRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGD 156 (942)
T ss_pred HHHHHHHHHHHhcCCCCCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCccccceEEEecCCeEEEcccccCCCccccccCCCeeeecceeee-----------ccchhhhHHHhhhccCc
Q 003313 161 IISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKETGDEVFSGLTCKH-----------VHSFFGKAADLVDSTEV 229 (831)
Q Consensus 161 iI~l~~G~~iPaDg~ll~g~~~~Vdes~LTGEs~pv~K~~g~~v~aGt~v~~-----------~~t~~g~~~~~~~~~~~ 229 (831)
|+.++.||+|||||++++|+.++||+|+|||||.|+.|++||.+|+||+|++ .+|.+||.+.++.++..
T Consensus 157 Ilsik~GdIiPaDaRLl~gD~LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVdst~~ 236 (942)
T KOG0205|consen 157 ILSIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ 236 (942)
T ss_pred eeeeccCCEecCccceecCCccccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcCCCC
Confidence 9999999999999999999999999999999999999999999999999988 79999999999999889
Q ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhHhhHHH----------------HHHHHHHHHHHhhhcCceEEc
Q 003313 230 VGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRDRIN----------------MLSVTLAIASYRLSQRGAITK 293 (831)
Q Consensus 230 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----------------~l~~~l~~~~~~l~~~~ilvk 293 (831)
..++|+.++.++.++++.+++++++.+.++|..+++.+..+.. ++++++++|..|++++|.++|
T Consensus 237 ~GHFqkVLt~IGn~ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItk 316 (942)
T KOG0205|consen 237 VGHFQKVLTGIGNFCICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 316 (942)
T ss_pred cccHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHH
Confidence 9999999999999999999999999988888877776665443 678899999999999999999
Q ss_pred cchhhhhhcCceEEEecCCCccccCceEEEEEeeeecCCCCChHHHHHHHHHhccccCCChHHHHHHHHhCChHHHhhcc
Q 003313 294 RMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANI 373 (831)
Q Consensus 294 ~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~ 373 (831)
++.++|.|+.++++|+|||||||.|+++|.+..++.+.++.++++++..|+.+++..+.|.+|.|++..+.+|.+.+.++
T Consensus 317 rmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~i 396 (942)
T KOG0205|consen 317 RMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGI 396 (942)
T ss_pred HHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCc
Confidence 99999999999999999999999999999997776788899999999999999999999999999999999999999999
Q ss_pred ceeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccCchhhHHHHHHHHHHHHhccCeeeeeeeecCCCCCCCC
Q 003313 374 NEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDS 453 (831)
Q Consensus 374 ~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~ 453 (831)
+.++++||++..||.+..+.+++|++++++|||||.|++.|+.+.++++.+.+.+++++++|+|.+++|++..++...+.
T Consensus 397 kevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~ 476 (942)
T KOG0205|consen 397 KEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKES 476 (942)
T ss_pred eEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888888
Q ss_pred CCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCc-CCCCCcccHH
Q 003313 454 PGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRD-KDENEALPVD 532 (831)
Q Consensus 454 ~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~-~~~~~~~~~~ 532 (831)
....+.|+|+.-+-||||.++.++|++....|.+|.|+|||....++..++++|+..|.++...+.|.+ -+.+...+.+
T Consensus 477 ~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~ 556 (942)
T KOG0205|consen 477 PGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVD 556 (942)
T ss_pred CCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHH
Confidence 888999999999999999999999999999999999999999999999999999999999977777765 4556778899
Q ss_pred HHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHH
Q 003313 533 ELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 533 ~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i 612 (831)
+.+++.+-|+.+.|+||+++|+.||++++.|+|+|||+||+|+||.||+|||+.+++|+|+.++|+|++.+.++.|..++
T Consensus 557 elie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepglSviI~av 636 (942)
T KOG0205|consen 557 ELIEKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (942)
T ss_pred HHhhhccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCCchhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHhhccchhccccCCCCCCCCCCccchHHHHHH
Q 003313 613 LTSRTVFQIMKNCMIHAVSITIHIVLSFVLLALIWEYDFPPFMVLIIAVLNDGTIITISKGRVKSSLRPDGWKLNEIFAA 692 (831)
Q Consensus 613 ~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 692 (831)
..+|.+|+||+.+..|+++..+-+++.++...+.|.+.|+|+.++++.+++|.+.++++.|+.+|++.|.+|+.+.+|..
T Consensus 637 ltSraIfqrmknytiyavsitiriv~gfml~alIw~~df~pfmvliiailnd~t~mtis~d~v~psp~pdswkl~~ifat 716 (942)
T KOG0205|consen 637 LTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFAT 716 (942)
T ss_pred HHHHHHHHHHhhheeeeehhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCCceEEEEcccCCCCCCCcccchhhhhee
Confidence 99999999999999999999998778888888888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccccccccCCCcHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcCchHHHHHHHH
Q 003313 693 GIVIGNYLALVTILFYWVVVHTDFFETHFHVRSLSSNTEEISSAVHLQVSIISQALIFVTRSQSWSFLERPGALLMCAFV 772 (831)
Q Consensus 693 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~ 772 (831)
.+++|.++++.+..+||..+.+.+++..||......+..+...+.|+.+++..+..+|.+|++.|+|...|+++++++++
T Consensus 717 gvVlgtyma~~tvif~w~~~~t~ff~~~f~v~~~~~~~~~~~~a~ylqvsi~sqaliFvtrsr~w~~~erpg~~L~~af~ 796 (942)
T KOG0205|consen 717 GVVLGTYMAIMTVIFFWAAYTTDFFPRTFGVRSLFGNEHELMSALYLQVSIISQALIFVTRSRSWSFVERPGWLLLIAFF 796 (942)
T ss_pred eeEehhHHHHHHHHHhhhhccccccccccceeeccCCHHHHHHhhhhhheehhceeeEEEeccCCccccCcHHHHHHHHH
Confidence 99999999999999999999899999889987776777778888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHH-hccccccC
Q 003313 773 LAQLVATLIAVYAHISFAYISGIGWGWAGVIWLYSLVFYILLDIIKFTVR-TLSREAWN 830 (831)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~k~~~r-~~~~~~w~ 830 (831)
.++++.+++..|.+|.+.+.....|.|...+|++++..+.+.++.|+..| -...++|+
T Consensus 797 ~aqliatliavya~w~~a~i~~igw~w~gviw~ysi~~y~~ld~~kf~~~y~lsg~a~~ 855 (942)
T KOG0205|consen 797 AAQLIATLIAVYANWSFARITGIGWGWAGVIWLYSIVFYIPLDILKFIIRYALSGKAWD 855 (942)
T ss_pred HHHHHHHHHHHHheecccceecceeeeeeeEEEEEEEEEEechhhheehhhhhhhhHHH
Confidence 99999999999999999999999999999999999999999999999999 56668886
No 3
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=6.6e-122 Score=1109.69 Aligned_cols=779 Identities=25% Similarity=0.388 Sum_probs=641.8
Q ss_pred cccCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCccCCCCC-cHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCc
Q 003313 22 LARLPLDEVFGQLGTTRQGLSSEDAEVRLKFFGSNKLEKKPE-NKFLKFLSFMWNPLSWVMETAALMAIALANGGGQGPD 100 (831)
Q Consensus 22 ~~~~~~~~~~~~l~~~~~GLs~~~~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~l~i~ail~~~~~~~~~~~~~ 100 (831)
.+..+.+++++.++++.+|||++|+++|+++||+|+++.+++ ++|..|+++|++|++++++++++++++++ +
T Consensus 49 ~~~~~~~~v~~~l~~~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~-------~ 121 (902)
T PRK10517 49 AAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE-------D 121 (902)
T ss_pred HHcCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc-------c
Confidence 457889999999999999999999999999999999998765 57889999999999999999999999975 8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEEC------CEEEEEeCCCcCCCcEEEEcCCCccccce
Q 003313 101 WQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRD------GQWKEQDAAVLVPGDIISIKFGDVIPADA 174 (831)
Q Consensus 101 ~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rd------g~~~~i~~~~lv~GDiI~l~~G~~iPaDg 174 (831)
|.++++|+++++++.++++++|+|+++++++|+++.+++++|+|| |++++|++++|||||+|.|++||+|||||
T Consensus 122 ~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg 201 (902)
T PRK10517 122 LFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADL 201 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeE
Confidence 999999999999999999999999999999999999999999999 78999999999999999999999999999
Q ss_pred EEEecCCeEEEcccccCCCccccccCCC-------------eeeecceeee-----------ccchhhhHHHhhhcc-Cc
Q 003313 175 RLLEGDPLKIDQSELTGESLTVTKETGD-------------EVFSGLTCKH-----------VHSFFGKAADLVDST-EV 229 (831)
Q Consensus 175 ~ll~g~~~~Vdes~LTGEs~pv~K~~g~-------------~v~aGt~v~~-----------~~t~~g~~~~~~~~~-~~ 229 (831)
+|++|+++.||||+|||||.|+.|.+++ .+|+||.+.+ .+|++|++.++++++ ..
T Consensus 202 ~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~~ 281 (902)
T PRK10517 202 RILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDSE 281 (902)
T ss_pred EEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCCC
Confidence 9999977999999999999999998874 7999999987 799999999999876 47
Q ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhHhhH---------------HH-HHHHHHHHHHHhhhcCceEEc
Q 003313 230 VGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRDR---------------IN-MLSVTLAIASYRLSQRGAITK 293 (831)
Q Consensus 230 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------l~-~l~~~l~~~~~~l~~~~ilvk 293 (831)
++|+|+.++++++++..+.++.+.+.+++.+. ....+... ++ +++++++.|+.+|+|+|++||
T Consensus 282 ~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~-~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ilVk 360 (902)
T PRK10517 282 PNAFQQGISRVSWLLIRFMLVMAPVVLLINGY-TKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVK 360 (902)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHH-hcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcEEe
Confidence 89999999999887544333322222222111 11122211 11 456778889999999999999
Q ss_pred cchhhhhhcCceEEEecCCCccccCceEEEEEeeeecCCCCChHHHHHHHHHhcccc--CCChHHHHHHHHhCCh--HHH
Q 003313 294 RMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLE--NQDAIDAAIINMLADP--KEA 369 (831)
Q Consensus 294 ~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~--~~~~~~~ai~~~~~~~--~~~ 369 (831)
+++++|++|++|+||||||||||+|+|+|.++.. ..+.+.++++..++.++... .+||+|.|++.++... ...
T Consensus 361 ~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~---~~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~~~ 437 (902)
T PRK10517 361 RLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTD---ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESARSL 437 (902)
T ss_pred cchhhhhccCCCEEEecCCCccccceEEEEEEec---CCCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchhhh
Confidence 9999999999999999999999999999988641 22345567777776654432 3699999999887532 223
Q ss_pred hhccceeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccC----------chhhHHHHHHHHHHHHhccCeee
Q 003313 370 RANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQE----------KEEIGGKVHEIINKLAEKGLRSL 439 (831)
Q Consensus 370 ~~~~~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l 439 (831)
...++.++++||++.+|+|++++++.++.+..++||+||.++++|.. +++.++++.+..++++++|+|++
T Consensus 438 ~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvl 517 (902)
T PRK10517 438 ASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVV 517 (902)
T ss_pred hhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEE
Confidence 45688899999999999999998876777789999999999999963 12345567777889999999999
Q ss_pred eeeeecCCCCCC---CCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCc
Q 003313 440 AVAVQEVPEMTE---DSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSS 516 (831)
Q Consensus 440 ~~a~~~~~~~~~---~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~ 516 (831)
++||++++..+. ...|+|++|+|+++|+||+||+++++|++|+++||+++|+||||+.||.++|+++||. +..
T Consensus 518 avA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~----~~~ 593 (902)
T PRK10517 518 AVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLD----AGE 593 (902)
T ss_pred EEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC----ccC
Confidence 999998764322 1247899999999999999999999999999999999999999999999999999995 346
Q ss_pred cccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhc
Q 003313 517 LLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAA 596 (831)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aa 596 (831)
++.|.+++.++++++++.+++.++|||++|+||.++|+.+|++|++|+|+|||+||+|||++||||||||+|+|+||++|
T Consensus 594 v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAkeaA 673 (902)
T PRK10517 594 VLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAA 673 (902)
T ss_pred ceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHHHHHhC
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCChHHHHHHHHhhccchhccccCCC
Q 003313 597 DIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLLALIWE-YDFPPFMVLIIAVLNDGTIITISKGRV 675 (831)
Q Consensus 597 divl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~l~~~~~ 675 (831)
|+|+++|||.+|++++++||++|+||+|++.|.++.|+..++.++++.++.+ +|++|+|++|+|+++|.+++++++|++
T Consensus 674 DiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D~~~~al~~d~~ 753 (902)
T PRK10517 674 DIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVSQVAIPFDNV 753 (902)
T ss_pred CEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHhhcCCCC
Confidence 9999999999999999999999999999999999999987777666665566 699999999999999988899999999
Q ss_pred CCCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccCCCcHHHHHHHHHHHHHHHHHHHhhhhc
Q 003313 676 KSSL--RPDGWKLNEIFAAGIVIGNYLALVTILFYWVVVHTDFFETHFHVRSLSSNTEEISSAVHLQVSIISQALIFVTR 753 (831)
Q Consensus 676 ~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~r 753 (831)
+++. +|++|+.+.+.+.++..|++.+++.+..|++++.. ++... .......++.+|+.+.++|.++++++|
T Consensus 754 ~~~~m~~p~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~F~~~~~~q~~~~~~~R 826 (902)
T PRK10517 754 DDEQIQKPQRWNPADLGRFMVFFGPISSIFDILTFCLMWWV------FHANT-PETQTLFQSGWFVVGLLSQTLIVHMIR 826 (902)
T ss_pred ChhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------ccccc-hhhHhHHHHHHHHHHHHHHHHHHHhhc
Confidence 8874 78888888888888888999888877666654321 11100 001123566779999999999999999
Q ss_pred cCCC-CCCcCchHHHHHHHHHHHHHHHHHHHhhh-cccccccchh--HHHHHHHHHHHHHHHHHHHHHHHHHH-hcc
Q 003313 754 SQSW-SFLERPGALLMCAFVLAQLVATLIAVYAH-ISFAYISGIG--WGWAGVIWLYSLVFYILLDIIKFTVR-TLS 825 (831)
Q Consensus 754 ~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~e~~k~~~r-~~~ 825 (831)
+++. +|.+.+.+..+++.++..++...++ |.+ ...+.+.+++ +..|+++++++.+ ++.|+.|.++. +++
T Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~e~~K~~~~~~~~ 900 (902)
T PRK10517 827 TRRIPFIQSRAAWPLMIMTLIVMAVGIALP-FSPLASYLQLQALPLSYFPWLVAILAGYM--TLTQLVKGFYSRRYG 900 (902)
T ss_pred cCCCCcccchHHHHHHHHHHHHHHHHHHhh-HHHHHHhhCCcCCChhHHHHHHHHHHHHH--HHHHHHHHHHHHhhc
Confidence 9874 3444344333333333333333232 112 3456677777 4444444444433 66788877543 443
No 4
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=2.5e-121 Score=1106.54 Aligned_cols=787 Identities=24% Similarity=0.374 Sum_probs=642.4
Q ss_pred ccccCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCccCCCC-CcHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC----C
Q 003313 21 DLARLPLDEVFGQLGTTRQGLSSEDAEVRLKFFGSNKLEKKP-ENKFLKFLSFMWNPLSWVMETAALMAIALANG----G 95 (831)
Q Consensus 21 ~~~~~~~~~~~~~l~~~~~GLs~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~i~ail~~~~~~~----~ 95 (831)
..|+.+.+++++.|+++.+|||++|+++|+++||+|+++.++ .++|+.|+++|++|+.++|+++++++++++.. .
T Consensus 26 ~~~~~~~~~v~~~l~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~ 105 (903)
T PRK15122 26 REAANSLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRR 105 (903)
T ss_pred HHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccC
Confidence 357889999999999999999999999999999999999766 56889999999999999999999999997521 1
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECC------EEEEEeCCCcCCCcEEEEcCCCc
Q 003313 96 GQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDG------QWKEQDAAVLVPGDIISIKFGDV 169 (831)
Q Consensus 96 ~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg------~~~~i~~~~lv~GDiI~l~~G~~ 169 (831)
+...+|.++++|+++++++..++++||++++++.++|+++.+++++|+||| ++++|++++|||||+|.|++||+
T Consensus 106 ~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~ 185 (903)
T PRK15122 106 GEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDM 185 (903)
T ss_pred CccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCE
Confidence 223479999999999999999999999999999999999999999999994 89999999999999999999999
Q ss_pred cccceEEEecCCeEEEcccccCCCccccccC-----------------------CCeeeecceeee-----------ccc
Q 003313 170 IPADARLLEGDPLKIDQSELTGESLTVTKET-----------------------GDEVFSGLTCKH-----------VHS 215 (831)
Q Consensus 170 iPaDg~ll~g~~~~Vdes~LTGEs~pv~K~~-----------------------g~~v~aGt~v~~-----------~~t 215 (831)
|||||+|++|+++.||||+|||||.|+.|.+ +|.+|+||.+.+ .+|
T Consensus 186 IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T 265 (903)
T PRK15122 186 IPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRT 265 (903)
T ss_pred EeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEecccc
Confidence 9999999999778999999999999999975 368999999987 799
Q ss_pred hhhhHHHhhhccCccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhHhhH---------------HH-HHHHHHH
Q 003313 216 FFGKAADLVDSTEVVGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRDR---------------IN-MLSVTLA 279 (831)
Q Consensus 216 ~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------l~-~l~~~l~ 279 (831)
++|++.+++.+.+.++++++.++++++++..+..+.+.+.+++.+. ....+... ++ +++++++
T Consensus 266 ~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~-~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La 344 (903)
T PRK15122 266 YFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGF-TKGDWLEALLFALAVAVGLTPEMLPMIVSSNLA 344 (903)
T ss_pred HhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-ccCCHHHHHHHHHHHHHHHccchHHHHHHHHHH
Confidence 9999999998766778999999988876433322212111111111 11122211 11 4567788
Q ss_pred HHHHhhhcCceEEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeecCCCCChHHHHHHHHHhccc--cCCChHHH
Q 003313 280 IASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRL--ENQDAIDA 357 (831)
Q Consensus 280 ~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~--~~~~~~~~ 357 (831)
.|+.+|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+++. ..+.+.++++.+++.++.. ..+||+|.
T Consensus 345 ~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~---~~~~~~~~~l~~a~l~s~~~~~~~~p~e~ 421 (903)
T PRK15122 345 KGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLD---VSGRKDERVLQLAWLNSFHQSGMKNLMDQ 421 (903)
T ss_pred HHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEc---CCCCChHHHHHHHHHhCCCCCCCCChHHH
Confidence 899999999999999999999999999999999999999999998652 2233456677766654322 24599999
Q ss_pred HHHHHhCChH--HHhhccceeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccC----------chhhHHHHH
Q 003313 358 AIINMLADPK--EARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQE----------KEEIGGKVH 425 (831)
Q Consensus 358 ai~~~~~~~~--~~~~~~~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~----------~~~~~~~~~ 425 (831)
|++.++.... .....++.++.+||++.+|+|++++++.+|+++.++|||||.++++|.. +++.++++.
T Consensus 422 All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~ 501 (903)
T PRK15122 422 AVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLL 501 (903)
T ss_pred HHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHH
Confidence 9999875321 2334678899999999999999998876788899999999999999963 223356677
Q ss_pred HHHHHHHhccCeeeeeeeecCCCCC-----CCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHH
Q 003313 426 EIINKLAEKGLRSLAVAVQEVPEMT-----EDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAK 500 (831)
Q Consensus 426 ~~~~~~~~~G~r~l~~a~~~~~~~~-----~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~ 500 (831)
+..++++++|+|++++||++++..+ .+..|+|++|+|+++++||+|+|++++|++|+++||+++|+||||+.||.
T Consensus 502 ~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~ 581 (903)
T PRK15122 502 ALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTA 581 (903)
T ss_pred HHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHH
Confidence 7888999999999999999876432 12357899999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCC
Q 003313 501 ETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKAD 580 (831)
Q Consensus 501 ~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Ad 580 (831)
++|+++||.. ..++.|.+++.++++++.+.+++.++|||++|+||.++|+.+|++|++|+|+|||+||+|||++||
T Consensus 582 aIA~~lGI~~----~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~AD 657 (903)
T PRK15122 582 KICREVGLEP----GEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDAD 657 (903)
T ss_pred HHHHHcCCCC----CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCC
Confidence 9999999953 468899999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCchHHHhhhcCEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCChHHHHHH
Q 003313 581 IGIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLLALIWE-YDFPPFMVLII 659 (831)
Q Consensus 581 vgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~-~~~~~~~~l~~ 659 (831)
||||||+|+|+||++||+|+++|||++|++++++||++|+||+|++.|.++.|+..++..+++.++.+ .|++|+|++|+
T Consensus 658 VGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~ 737 (903)
T PRK15122 658 VGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQ 737 (903)
T ss_pred EEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999977666555544444 78999999999
Q ss_pred HHhhccchhccccCCCCCCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccCCCcHHHHHHHH
Q 003313 660 AVLNDGTIITISKGRVKSSL--RPDGWKLNEIFAAGIVIGNYLALVTILFYWVVVHTDFFETHFHVRSLSSNTEEISSAV 737 (831)
Q Consensus 660 ~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 737 (831)
|+++|.+++++++|++++.. +|++|+.+.+-+.++..|+..+++++..|++++.. +. .+. . ......+|++
T Consensus 738 nli~D~~~lal~~d~~~~~~m~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~--~~~--~-~~~~~~~t~~ 810 (903)
T PRK15122 738 NLMYDISQLSLPWDKMDKEFLRKPRKWDAKNIGRFMLWIGPTSSIFDITTFALMWFV--FA--ANS--V-EMQALFQSGW 810 (903)
T ss_pred HHHHHHHHHhhcCCCCCHhhcCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH--hc--cCc--H-hhhhhhHHHH
Confidence 99999888999999988775 67778776666666677887777777655543211 00 010 0 0011356888
Q ss_pred HHHHHHHHHHHhhhhccCCCCCCcCc-hHHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHH
Q 003313 738 HLQVSIISQALIFVTRSQSWSFLERP-GALLMCAFVLAQLVATLIAVYAHISFAYISGIGWGWAGVIWLYSLVFYILLDI 816 (831)
Q Consensus 738 ~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 816 (831)
|++++++|+++++++|+++.++++++ .+..+++.++.+++.+.++....-..|.+.++++..|++++.++++++++.|+
T Consensus 811 f~~l~~~q~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~e~ 890 (903)
T PRK15122 811 FIEGLLSQTLVVHMLRTQKIPFIQSTAALPVLLTTGLIMAIGIYIPFSPLGAMVGLEPLPWSYFPWLAATLLGYCLVAQG 890 (903)
T ss_pred HHHHHHHHHHHHHhhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999874444444 22333332332222222221001235677888888888878888888888999
Q ss_pred HHHHHH
Q 003313 817 IKFTVR 822 (831)
Q Consensus 817 ~k~~~r 822 (831)
.|.+.+
T Consensus 891 ~k~~~~ 896 (903)
T PRK15122 891 MKRFYI 896 (903)
T ss_pred HHHHHh
Confidence 886543
No 5
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=1.8e-121 Score=1093.98 Aligned_cols=723 Identities=54% Similarity=0.859 Sum_probs=632.2
Q ss_pred CCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHH
Q 003313 40 GLSSEDAEVRLKFFGSNKLEKKPENKFLKFLSFMWNPLSWVMETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISF 119 (831)
Q Consensus 40 GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~i~ail~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~ 119 (831)
|||++|+++|+++||+|+++.++++.|+.|+++|++|+.++++++++++++++ +|.++++++++++++..+++
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~-------~~~~~~~i~~~~~i~~~i~~ 73 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE-------NWVDFVIILGLLLLNATIGF 73 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhchHHHHHHHHHHHHHhhc-------chhhhhhhhhhhHHHHHHHH
Confidence 89999999999999999999888888999999999999999999999999986 89999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCCeEEEEECCEEEEEeCCCcCCCcEEEEcCCCccccceEEEecCCeEEEcccccCCCcccccc
Q 003313 120 IEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKE 199 (831)
Q Consensus 120 ~~~~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~g~~~~Vdes~LTGEs~pv~K~ 199 (831)
++|+++++++++|+++.+++++|+|||++++|+++||||||+|.|++||+|||||+|++|+++.||||+|||||.|+.|.
T Consensus 74 ~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~PV~K~ 153 (755)
T TIGR01647 74 IEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKK 153 (755)
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCccceEec
Confidence 99999999999999999999999999999999999999999999999999999999999966999999999999999999
Q ss_pred CCCeeeecceeee-----------ccchhhhHHHhhhccC-ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhH
Q 003313 200 TGDEVFSGLTCKH-----------VHSFFGKAADLVDSTE-VVGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLY 267 (831)
Q Consensus 200 ~g~~v~aGt~v~~-----------~~t~~g~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (831)
+||.+|+||.+.+ .+|++|++.+++++++ .++++|+.+++++++++.++++.+++.+++++......+
T Consensus 154 ~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~ 233 (755)
T TIGR01647 154 TGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF 233 (755)
T ss_pred cCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 9999999999987 7999999999998876 678999999999988655444433333333222122222
Q ss_pred hhHHH----------------HHHHHHHHHHHhhhcCceEEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeecC
Q 003313 268 RDRIN----------------MLSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFN 331 (831)
Q Consensus 268 ~~~l~----------------~l~~~l~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~ 331 (831)
...+. +++++++.+++||+|+|+++|+++++|+||++|++|||||||||+|+|+|.+++. ..
T Consensus 234 ~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~--~~ 311 (755)
T TIGR01647 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILP--FF 311 (755)
T ss_pred HHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEe--cC
Confidence 22211 4667788899999999999999999999999999999999999999999999764 22
Q ss_pred CCCChHHHHHHHHHhccccCCChHHHHHHHHhCChHHHhhccceeEEecCCCCCceEEEEEEcCC-CcEEEEEccchHHH
Q 003313 332 RDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAITYTDSE-GNWYRASKGAPEQI 410 (831)
Q Consensus 332 ~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sv~v~~~~-g~~~~~~kGa~e~i 410 (831)
.+.++++++.+++.++...++||+|.|+++++.+....+..++.++.+||++.+|+|++++.+.+ |+.+.++||+||.+
T Consensus 312 ~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~i 391 (755)
T TIGR01647 312 NGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVI 391 (755)
T ss_pred CCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHH
Confidence 23567788888887765555699999999987655444567888999999999999999887654 77788999999999
Q ss_pred hhhccCchhhHHHHHHHHHHHHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEE
Q 003313 411 LNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKM 490 (831)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m 490 (831)
+++|+...+.++++.+.+++++++|+|++++|+++ .|++|+|+|+++|+||+|||++++|++||++||+++|
T Consensus 392 l~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~--------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~m 463 (755)
T TIGR01647 392 LDLCDNKKEIEEKVEEKVDELASRGYRALGVARTD--------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKM 463 (755)
T ss_pred HHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEc--------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEE
Confidence 99998766677888889999999999999999973 2678999999999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHhCCCCCCCCC-ccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCC
Q 003313 491 ITGDHLAIAKETGRRLGIGTNMYPS-SLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDG 569 (831)
Q Consensus 491 ~TGD~~~~a~~ia~~~gi~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG 569 (831)
+|||++.+|.++|+++||..+..+. ....+.+.+.++++++++.++++++|||++|+||.++|+.+|++|++|+|+|||
T Consensus 464 iTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDG 543 (755)
T TIGR01647 464 VTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDG 543 (755)
T ss_pred ECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCC
Confidence 9999999999999999997543322 233455556778889999999999999999999999999999999999999999
Q ss_pred ccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 003313 570 VNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLLALIWEY 649 (831)
Q Consensus 570 ~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~ 649 (831)
+||+|||++||||||||+|+|+||++||+|+++|||++|++++++||++|+|++|++.|.++.|+..++.+++..+.+++
T Consensus 544 vNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~~ 623 (755)
T TIGR01647 544 VNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNF 623 (755)
T ss_pred cccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999877766666666677
Q ss_pred CCChHHHHHHHHhhccchhccccCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccCCCc
Q 003313 650 DFPPFMVLIIAVLNDGTIITISKGRVKSSLRPDGWKLNEIFAAGIVIGNYLALVTILFYWVVVHTDFFETHFHVRSLSSN 729 (831)
Q Consensus 650 ~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (831)
+++|+|++|+|+++|++++++++|+++|+++|++|...+++..++..|++.++.++.+|++.+...++...++ ....
T Consensus 624 ~l~~~~il~~~l~~d~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 700 (755)
T TIGR01647 624 YFPPIMVVIIAILNDGTIMTIAYDNVKPSKLPQRWNLREVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFG---LQLL 700 (755)
T ss_pred chhHHHHHHHHHHHhHhHhhccCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhccc---cccc
Confidence 8999999999999999899999999999999999999999999999999999999887777664221111111 1113
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcCchHHHHHHHHHHHHHHHHHH
Q 003313 730 TEEISSAVHLQVSIISQALIFVTRSQSWSFLERPGALLMCAFVLAQLVATLIA 782 (831)
Q Consensus 730 ~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 782 (831)
..+++|++|+.++++|+++++.+|+++.+|++.|++++++++++..++.+++.
T Consensus 701 ~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ 753 (755)
T TIGR01647 701 HGNLQSLIYLQVSISGQATIFVTRTHGFFWSERPGKLLFIAFVIAQIIATFIA 753 (755)
T ss_pred HhhhHHHHHHHHHHHHHHHHheeccCCCCcccCCcHHHHHHHHHHHHHHHHHh
Confidence 45789999999999999999999999988899999999999888877766654
No 6
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=2.1e-121 Score=1118.49 Aligned_cols=792 Identities=25% Similarity=0.362 Sum_probs=641.6
Q ss_pred CccccCCHHHHHHHhCCC-CCCCCHHHHHHHHHhcCCCccCCCC-CcHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCC
Q 003313 20 IDLARLPLDEVFGQLGTT-RQGLSSEDAEVRLKFFGSNKLEKKP-ENKFLKFLSFMWNPLSWVMETAALMAIALANGGGQ 97 (831)
Q Consensus 20 ~~~~~~~~~~~~~~l~~~-~~GLs~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~i~ail~~~~~~~~~~ 97 (831)
.|||..+++|+++.|+++ .+|||++|+++|+++||+|+++.++ .+.|+.|+++|++|+.++|+++++++++++
T Consensus 5 ~~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~----- 79 (1053)
T TIGR01523 5 NAYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH----- 79 (1053)
T ss_pred CchhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh-----
Confidence 578999999999999998 6899999999999999999999875 678999999999999999999999999986
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEeCCCcCCCcEEEEcCCCccccceEEE
Q 003313 98 GPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLL 177 (831)
Q Consensus 98 ~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll 177 (831)
+|.++++|++++++++.++++||+|+++++++|+++.+++++|+|||++++|+++||||||||.|++||+|||||+|+
T Consensus 80 --~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi 157 (1053)
T TIGR01523 80 --DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLI 157 (1053)
T ss_pred --hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEE
Confidence 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCeEEEcccccCCCccccccCC---------------Ceeeecceeee-----------ccchhhhHHHhhhccC---
Q 003313 178 EGDPLKIDQSELTGESLTVTKETG---------------DEVFSGLTCKH-----------VHSFFGKAADLVDSTE--- 228 (831)
Q Consensus 178 ~g~~~~Vdes~LTGEs~pv~K~~g---------------~~v~aGt~v~~-----------~~t~~g~~~~~~~~~~--- 228 (831)
+++++.||||+|||||.||.|.+. +++|+||.|.+ .+|++|++++++.+.+
T Consensus 158 ~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~~ 237 (1053)
T TIGR01523 158 ETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLF 237 (1053)
T ss_pred EeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhcc
Confidence 998899999999999999999642 57899999987 7999999999885432
Q ss_pred ---------------------------------ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc------------
Q 003313 229 ---------------------------------VVGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQ------------ 263 (831)
Q Consensus 229 ---------------------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 263 (831)
.++|+|+.++++++++..+.++.+++.++......
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~av~l~ 317 (1053)
T TIGR01523 238 QRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKFDVDKEVAIYAICLA 317 (1053)
T ss_pred ccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 14899999999998744333222222111111000
Q ss_pred hhhHhhHHH-HHHHHHHHHHHhhhcCceEEccchhhhhhcCceEEEecCCCccccCceEEEEEeeee---c--C---CCC
Q 003313 264 HRLYRDRIN-MLSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEV---F--N---RDM 334 (831)
Q Consensus 264 ~~~~~~~l~-~l~~~l~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~---~--~---~~~ 334 (831)
....+++++ +++++++++++||+++|++||+++++|+||++++||+|||||||+|+|+|++++... + . .++
T Consensus 318 Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~ 397 (1053)
T TIGR01523 318 ISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAF 397 (1053)
T ss_pred HHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCC
Confidence 001112222 677889999999999999999999999999999999999999999999999876421 0 0 000
Q ss_pred ---------------------------------------C---------hHHHHHHHHHhccc------------cCCCh
Q 003313 335 ---------------------------------------D---------KDILVLLAARASRL------------ENQDA 354 (831)
Q Consensus 335 ---------------------------------------~---------~~~~l~~a~~~~~~------------~~~~~ 354 (831)
+ ...++..++.|+.. ..+||
T Consensus 398 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~~Gdp 477 (1053)
T TIGR01523 398 NPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWKAHGDP 477 (1053)
T ss_pred CCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCceeeCcCc
Confidence 0 01345555555421 12599
Q ss_pred HHHHHHHHhCCh----------HHH-------------------hhccceeEEecCCCCCceEEEEEEcCCC-cEEEEEc
Q 003313 355 IDAAIINMLADP----------KEA-------------------RANINEVHFLPFNPVDKRTAITYTDSEG-NWYRASK 404 (831)
Q Consensus 355 ~~~ai~~~~~~~----------~~~-------------------~~~~~~l~~~~f~s~~k~~sv~v~~~~g-~~~~~~k 404 (831)
+|.|++.++... .+. ...|++++.+||+|+||||++++++.++ ++++++|
T Consensus 478 tE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~K 557 (1053)
T TIGR01523 478 TEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAK 557 (1053)
T ss_pred cHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEe
Confidence 999999886311 011 2347789999999999999999986544 4688999
Q ss_pred cchHHHhhhccC------------chhhHHHHHHHHHHHHhccCeeeeeeeecCCCCC------------CCCCCCCcee
Q 003313 405 GAPEQILNMCQE------------KEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMT------------EDSPGGPRSF 460 (831)
Q Consensus 405 Ga~e~i~~~~~~------------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~------------~~~~e~~l~~ 460 (831)
||||.|+++|+. +++.++++.+.+++|+++|+||+++||+.++..+ ++..|+||+|
T Consensus 558 GApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~~L~~ 637 (1053)
T TIGR01523 558 GAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEF 637 (1053)
T ss_pred CChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchhhhccCCEE
Confidence 999999999963 1234677888899999999999999999876431 2356899999
Q ss_pred eeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCC--------CCCccccCCcCCCCCcccHH
Q 003313 461 CGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNM--------YPSSLLLGRDKDENEALPVD 532 (831)
Q Consensus 461 lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~--------~~~~~~~~~~~~~~~~~~~~ 532 (831)
+|+++++||+|++++++|++|+++||+++|+|||++.||.++|+++||.... ....++.|.+++.+++++++
T Consensus 638 ~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~ 717 (1053)
T TIGR01523 638 LGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVD 717 (1053)
T ss_pred EEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHH
Confidence 9999999999999999999999999999999999999999999999996421 12357888899988999999
Q ss_pred HHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEec-CchHHHhhhcCEEEeCCChhHHHHH
Q 003313 533 ELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVA-GATEAARGAADIVLTEPGLSVICSA 611 (831)
Q Consensus 533 ~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~-~~~~~a~~aadivl~~~~~~~i~~~ 611 (831)
+..++..||||++|+||.++|+.+|++|++|+|+|||+||+|||++|||||||| +|+|+|+++||+++++|||++|+++
T Consensus 718 ~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~ 797 (1053)
T TIGR01523 718 DLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNA 797 (1053)
T ss_pred HHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----c-cCCCChHHHHHHHHhhccc-hhccccCCCCCC-----C
Q 003313 612 VLTSRTVFQIMKNCMIHAVSITIHIVLSFVLLALI-----W-EYDFPPFMVLIIAVLNDGT-IITISKGRVKSS-----L 679 (831)
Q Consensus 612 i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~-----~-~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~-----~ 679 (831)
+++||++|+|++|++.|.+++|+..++.++++.++ . ++|++|+|++|+|+++|.+ +++++++++++. |
T Consensus 798 i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~~m~~~P 877 (1053)
T TIGR01523 798 IEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLP 877 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChhHHhcCC
Confidence 99999999999999999999999776666655544 2 3689999999999999965 699999887664 2
Q ss_pred CCC--ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhh---hccc----cccccccCCCcHHHHHHHHHHHHHHHHHHHhh
Q 003313 680 RPD--GWKLNEIFAAGIVIGNYLALVTILFYWVVVHT---DFFE----THFHVRSLSSNTEEISSAVHLQVSIISQALIF 750 (831)
Q Consensus 680 ~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~ 750 (831)
+++ +...+.++..++..|++++++++..|++.+.. +... ..++.. .....+++|++|.+++++|+++++
T Consensus 878 r~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~a~t~~f~~l~~~~~~~~~ 955 (1053)
T TIGR01523 878 HDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAG--CNDVFKARSAAFATMTFCALILAV 955 (1053)
T ss_pred CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccccccccc--ccchhhhHHHHHHHHHHHHHHHHH
Confidence 221 22235666677888999998888776644321 0000 001100 012456789999999999999999
Q ss_pred hhccCCCCCCc------------------CchHHHHHHHHHHHHHHHHHHHhhh-c--ccccccchhHHHHHHHHHHHHH
Q 003313 751 VTRSQSWSFLE------------------RPGALLMCAFVLAQLVATLIAVYAH-I--SFAYISGIGWGWAGVIWLYSLV 809 (831)
Q Consensus 751 ~~r~~~~~~~~------------------~~~~~l~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~ 809 (831)
++|+.+.+.+. ..|.++++++++++++..++ +|.+ + ..|.+.|++|.|++ +++++++
T Consensus 956 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~-~~~p~~~~~~f~~~~l~~~w~~-~~~~~~~ 1033 (1053)
T TIGR01523 956 EVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPT-IYIPVINDDVFKHKPIGAEWGL-AAAATIA 1033 (1053)
T ss_pred HHhcCchhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHHH-HhhhhhhhhhhccCCcchHHHH-HHHHHHH
Confidence 99997633211 13456666776666554433 4544 2 26778888886554 5788888
Q ss_pred HHHHHHHHHHHHH
Q 003313 810 FYILLDIIKFTVR 822 (831)
Q Consensus 810 ~~~~~e~~k~~~r 822 (831)
.++..|++|++.|
T Consensus 1034 ~~~~~e~~K~~~r 1046 (1053)
T TIGR01523 1034 FFFGAEIWKCGKR 1046 (1053)
T ss_pred HHHHHHHHHHHHH
Confidence 8999999999988
No 7
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=1.7e-120 Score=1098.66 Aligned_cols=775 Identities=23% Similarity=0.360 Sum_probs=636.1
Q ss_pred ccccCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCccCCCC-CcHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCC
Q 003313 21 DLARLPLDEVFGQLGTTRQGLSSEDAEVRLKFFGSNKLEKKP-ENKFLKFLSFMWNPLSWVMETAALMAIALANGGGQGP 99 (831)
Q Consensus 21 ~~~~~~~~~~~~~l~~~~~GLs~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~i~ail~~~~~~~~~~~~ 99 (831)
+.|.++.+++++.|+++.+|||++|+++|+++||+|+++.++ .++|+.|+++|++|+.++++++++++++.+
T Consensus 14 ~~~~~~~~~~~~~l~~~~~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~------- 86 (867)
T TIGR01524 14 KESQMGKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD------- 86 (867)
T ss_pred HHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh-------
Confidence 457889999999999998999999999999999999998876 468899999999999999999999999875
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEE------CCEEEEEeCCCcCCCcEEEEcCCCccccc
Q 003313 100 DWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLR------DGQWKEQDAAVLVPGDIISIKFGDVIPAD 173 (831)
Q Consensus 100 ~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~r------dg~~~~i~~~~lv~GDiI~l~~G~~iPaD 173 (831)
+|.++++|+++++++..+++++|+|++++.++|+++.+++++|+| ||++++|+++||||||+|.+++||+||||
T Consensus 87 ~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaD 166 (867)
T TIGR01524 87 DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPAD 166 (867)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEccc
Confidence 899999999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred eEEEecCCeEEEcccccCCCccccccCCC-------------eeeecceeee-----------ccchhhhHHHhhhccCc
Q 003313 174 ARLLEGDPLKIDQSELTGESLTVTKETGD-------------EVFSGLTCKH-----------VHSFFGKAADLVDSTEV 229 (831)
Q Consensus 174 g~ll~g~~~~Vdes~LTGEs~pv~K~~g~-------------~v~aGt~v~~-----------~~t~~g~~~~~~~~~~~ 229 (831)
|+|++|+++.||||+|||||.|+.|.+|+ .+|+||.+.+ .+|++|++.+++.+.+.
T Consensus 167 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~ 246 (867)
T TIGR01524 167 ARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERRG 246 (867)
T ss_pred EEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhCCCC
Confidence 99999977899999999999999998874 6999999887 79999999999988667
Q ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhHhhH----H-----------H-HHHHHHHHHHHhhhcCceEEc
Q 003313 230 VGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRDR----I-----------N-MLSVTLAIASYRLSQRGAITK 293 (831)
Q Consensus 230 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l-----------~-~l~~~l~~~~~~l~~~~ilvk 293 (831)
++|+|+.++++++++..+.++.+++.+++.+. ....+... + + +++++++.++.||+|+|+++|
T Consensus 247 ~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk 325 (867)
T TIGR01524 247 QTAFDKGVKSVSKLLIRFMLVMVPVVLMINGL-MKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVK 325 (867)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHheehHHH-hcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEEc
Confidence 89999999999987544433322222222111 11122211 1 1 456778889999999999999
Q ss_pred cchhhhhhcCceEEEecCCCccccCceEEEEEeeeecCCCCChHHHHHHHHHhccc--cCCChHHHHHHHHhCCh--HHH
Q 003313 294 RMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRL--ENQDAIDAAIINMLADP--KEA 369 (831)
Q Consensus 294 ~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~--~~~~~~~~ai~~~~~~~--~~~ 369 (831)
+++++|+||++++||||||||||+|+|+|.++.. ..+.+.++++.++++++.. ..+||+|.|++.++... ...
T Consensus 326 ~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~---~~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~~ 402 (867)
T TIGR01524 326 ELSAIQNFGAMDILCTDKTGTLTQDKIELEKHID---SSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQT 402 (867)
T ss_pred cchhhhhccCccEEEecCCCccccCeEEEEEEec---CCCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhchhhH
Confidence 9999999999999999999999999999998642 2234566677777655432 23599999999887532 223
Q ss_pred hhccceeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccC----------chhhHHHHHHHHHHHHhccCeee
Q 003313 370 RANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQE----------KEEIGGKVHEIINKLAEKGLRSL 439 (831)
Q Consensus 370 ~~~~~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l 439 (831)
+..++.++.+||+|++|+|++++++.++.++.++||+||.++++|+. +++.++++.+.+++++++|+|++
T Consensus 403 ~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvl 482 (867)
T TIGR01524 403 ASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVI 482 (867)
T ss_pred hhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEE
Confidence 45678899999999999999998766666789999999999999963 12345677888899999999999
Q ss_pred eeeeecCCCCCC---CCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCc
Q 003313 440 AVAVQEVPEMTE---DSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSS 516 (831)
Q Consensus 440 ~~a~~~~~~~~~---~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~ 516 (831)
++||++++..+. ++.|++|+|+|+++++||+|+|++++|++|+++||+++|+|||++.||.++|+++||.. ..
T Consensus 483 avA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~----~~ 558 (867)
T TIGR01524 483 AVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA----ND 558 (867)
T ss_pred EEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC----CC
Confidence 999998765432 12478999999999999999999999999999999999999999999999999999963 46
Q ss_pred cccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhc
Q 003313 517 LLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAA 596 (831)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aa 596 (831)
++.|.+++.++++++.+.++++++|||++|+||.++|+.+|++|++|+|+|||+||+|||++||||||||+|+|+||++|
T Consensus 559 v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~aA 638 (867)
T TIGR01524 559 FLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKEAS 638 (867)
T ss_pred eeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHHHHHhC
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCChHHHHHHHHhhccchhccccCCC
Q 003313 597 DIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLLALIWE-YDFPPFMVLIIAVLNDGTIITISKGRV 675 (831)
Q Consensus 597 divl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~l~~~~~ 675 (831)
|+|+++|||++|++++++||++|+||+|++.|.++.|+..++.++++.++.+ +|++|+|++|+|+++|++++++++|++
T Consensus 639 DiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d~~~~al~~~~~ 718 (867)
T TIGR01524 639 DIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYDFSQLTLPWDKM 718 (867)
T ss_pred CEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 9999999999999999999999999999999999999977766665555555 799999999999999987899999998
Q ss_pred CCCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccCCCcHHHHHHHHHHHHHHHHHHHhhhhc
Q 003313 676 KSSL--RPDGWKLNEIFAAGIVIGNYLALVTILFYWVVVHTDFFETHFHVRSLSSNTEEISSAVHLQVSIISQALIFVTR 753 (831)
Q Consensus 676 ~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~r 753 (831)
+++. +|++|+.+.+.+.++..|++.+++.+..|++++...... + . ......+|..|+.++++|+++++++|
T Consensus 719 ~~~~m~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~---~-~~~~~~~t~~f~~~~~~~~~~~~~~R 791 (867)
T TIGR01524 719 DREFLKKPHQWEQKGMGRFMLCIGPVSSIFDIATFLLMWFVFSAN---T---V-EEQALFQSGWFVVGLLSQTLVVHMIR 791 (867)
T ss_pred ChHhhCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---c---h-hhhhHHHHHHHHHHHHHHHHHHHhhC
Confidence 8874 677787777887888889988887776665543211000 0 0 01234578899999999999999999
Q ss_pred cCCCCCCcCchHHHHHHHHHHHHHHHHHHHhhh----cccccccchhHH--HHHHHHHHHHHHHHHHHHHHHHHH
Q 003313 754 SQSWSFLERPGALLMCAFVLAQLVATLIAVYAH----ISFAYISGIGWG--WAGVIWLYSLVFYILLDIIKFTVR 822 (831)
Q Consensus 754 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~e~~k~~~r 822 (831)
+++..+++|+. ++.++++.+++..+ ..|.+ ...|.+.++|+. .|++++.+++ .++.|+.|.+..
T Consensus 792 ~~~~~~~~n~~--~~~~~~~~~~~~~~-~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~--~~~~e~~k~~~~ 861 (867)
T TIGR01524 792 TEKIPFIQSRA--AAPVMIATLLVMAL-GIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGY--MATMQLVKTFYI 861 (867)
T ss_pred cCCCCcCcchH--HHHHHHHHHHHHHH-HHHhchhhhhhhhccccCCccHHHHHHHHHHHH--HHHHHHHHHHHH
Confidence 98744444542 23233222222211 12222 134566655433 3333333433 366788887644
No 8
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.2e-119 Score=1085.77 Aligned_cols=783 Identities=30% Similarity=0.438 Sum_probs=638.7
Q ss_pred ccCCCCCccccCCHH--HHHHHhCCC-CCCCCHHHHHHHHHhcCCCccCCCC-CcHHHHHHHHHHhHHHHHHHHHHHHHH
Q 003313 14 NCNCGGIDLARLPLD--EVFGQLGTT-RQGLSSEDAEVRLKFFGSNKLEKKP-ENKFLKFLSFMWNPLSWVMETAALMAI 89 (831)
Q Consensus 14 ~~~~~~~~~~~~~~~--~~~~~l~~~-~~GLs~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~i~ail~~ 89 (831)
........||..+.+ ++...+.++ .+||+++|+.+|+++||+|+++..+ .+.|..|+++|++|+.++|++++++++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~ 94 (917)
T COG0474 15 STPVTSETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSA 94 (917)
T ss_pred cccCCcccccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555678888888 999999887 7799999999999999999999654 688999999999999999999999999
Q ss_pred HHhcCCCCCCch----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEeCCCcCCCcEEEEc
Q 003313 90 ALANGGGQGPDW----QDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIK 165 (831)
Q Consensus 90 ~~~~~~~~~~~~----~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~ 165 (831)
+++ .| .++..|.++++++.+++++||+|+++++++++++.+++++|+|||++++|+++||||||||.++
T Consensus 95 ~~~-------~~~~~~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~ 167 (917)
T COG0474 95 FVG-------DWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLE 167 (917)
T ss_pred Hhh-------cccccCcceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEEC
Confidence 986 55 5566788899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccceEEEecCCeEEEcccccCCCccccccC--------------CCeeeecceeee-----------ccchhhhH
Q 003313 166 FGDVIPADARLLEGDPLKIDQSELTGESLTVTKET--------------GDEVFSGLTCKH-----------VHSFFGKA 220 (831)
Q Consensus 166 ~G~~iPaDg~ll~g~~~~Vdes~LTGEs~pv~K~~--------------g~~v~aGt~v~~-----------~~t~~g~~ 220 (831)
+||+||||++|+++++++||||+|||||.|+.|.+ .+++|+||.+.+ .+|++|++
T Consensus 168 ~gd~vPAD~rLl~~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~i 247 (917)
T COG0474 168 AGDVVPADLRLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKI 247 (917)
T ss_pred CCCccccceEEEEecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHH
Confidence 99999999999999888999999999999999963 478999999987 79999999
Q ss_pred HHhhhcc-CccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhHhh----H-----------HH-HHHHHHHHHHH
Q 003313 221 ADLVDST-EVVGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRD----R-----------IN-MLSVTLAIASY 283 (831)
Q Consensus 221 ~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----------l~-~l~~~l~~~~~ 283 (831)
++++... +..+|+++.+++++++++.+.++..++.++..+......+.. + ++ ++++++++++.
T Consensus 248 a~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~ 327 (917)
T COG0474 248 ARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQ 327 (917)
T ss_pred HHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHH
Confidence 9999988 689999999999998865554443333333332221111221 1 11 67788999999
Q ss_pred hhhcCceEEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeecCCCCC------h---HHHHHHHHHhcc-cc---
Q 003313 284 RLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMD------K---DILVLLAARASR-LE--- 350 (831)
Q Consensus 284 ~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~------~---~~~l~~a~~~~~-~~--- 350 (831)
+|++++++||+++++|+||++++||+|||||||+|+|+|.+++......+.+ . ..++..+++|+. ..
T Consensus 328 ~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~ 407 (917)
T COG0474 328 RMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKN 407 (917)
T ss_pred HHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCccccccc
Confidence 9999999999999999999999999999999999999999998752011111 0 123444444442 22
Q ss_pred ----CCChHHHHHHHHhCC------hHHHhhccceeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccC----
Q 003313 351 ----NQDAIDAAIINMLAD------PKEARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQE---- 416 (831)
Q Consensus 351 ----~~~~~~~ai~~~~~~------~~~~~~~~~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~---- 416 (831)
.+||+|.|+++++.+ .......+++++++||+|+||||++++++.+|+++.++|||||.|+++|+.
T Consensus 408 ~~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~ 487 (917)
T COG0474 408 GWYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGEL 487 (917)
T ss_pred CceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcc
Confidence 369999999998753 334556667899999999999999999977787899999999999999973
Q ss_pred ---chhhHHHHHHHHHHHHhccCeeeeeeeecCCCCCC----CCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEE
Q 003313 417 ---KEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTE----DSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVK 489 (831)
Q Consensus 417 ---~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~----~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~ 489 (831)
.++.++.+.+..++|+++|+|++++|||..+..+. ++.|+||+|+|+++|+||||++++++|+.|+++||+++
T Consensus 488 ~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~ 567 (917)
T COG0474 488 EPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVW 567 (917)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEE
Confidence 34567889999999999999999999997765443 57899999999999999999999999999999999999
Q ss_pred EEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCC
Q 003313 490 MITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDG 569 (831)
Q Consensus 490 m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG 569 (831)
|+||||+.||++||++||+..+.....++.|.+++.+.++++.+.+++++||||++|+||.++|+.+|++|++|+|+|||
T Consensus 568 MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDG 647 (917)
T COG0474 568 MITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDG 647 (917)
T ss_pred EECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCC
Confidence 99999999999999999987643224488899999999999999999999999999999999999999999999999999
Q ss_pred ccChhhhccCCeeEEec-CchHHHhhhcCEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhc
Q 003313 570 VNDAPALKKADIGIAVA-GATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLLA-LIW 647 (831)
Q Consensus 570 ~ND~~al~~AdvgIa~~-~~~~~a~~aadivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~-~~~ 647 (831)
+||+||||+|||||||| +|+|+||++||+++.+++|..|..++++||++|.|++|++.|.+++|+..++.++++. +..
T Consensus 648 vNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~ 727 (917)
T COG0474 648 VNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNL 727 (917)
T ss_pred chhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999998 7999999999999999999999999999999999999999999999998665555544 444
Q ss_pred c-CCCChHHHHHHHHhhccc-hhccccCCCCC------CCCCCc--cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 003313 648 E-YDFPPFMVLIIAVLNDGT-IITISKGRVKS------SLRPDG--WKLNEIFAAGIVIGNYLALVTILFYWVVVHTDFF 717 (831)
Q Consensus 648 ~-~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~------~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 717 (831)
+ +|+.|+|++|+|+++|.+ +++++.+++++ +++|.+ |..+.++++.+..|...+++.++.|.+++....
T Consensus 728 ~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~- 806 (917)
T COG0474 728 FFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFI- 806 (917)
T ss_pred ccccHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-
Confidence 4 689999999999999996 68888775322 223444 555666666777788888888777666653211
Q ss_pred ccccccccCCCcHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcC---chHHHHHHHHHHHHHHHHHHHhhh-c-ccccc
Q 003313 718 ETHFHVRSLSSNTEEISSAVHLQVSIISQALIFVTRSQSWSFLER---PGALLMCAFVLAQLVATLIAVYAH-I-SFAYI 792 (831)
Q Consensus 718 ~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~-~-~~~~~ 792 (831)
....+.. ......+|++|+.++++++++.+.+|+.+.++++. .++.++.++++..++..+...+.. . ..+..
T Consensus 807 ~~~~~~~---~~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~~f~~ 883 (917)
T COG0474 807 ANTLGLD---LFQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQP 883 (917)
T ss_pred ccccchh---hHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHhhhccC
Confidence 1111110 01566789999999999999999999986555443 355555555555554443322222 2 34555
Q ss_pred cchhHHHHHHHHHHH
Q 003313 793 SGIGWGWAGVIWLYS 807 (831)
Q Consensus 793 ~~~~~~~~~~~~~~~ 807 (831)
.++++.-|++...++
T Consensus 884 ~~~~~~~~~~~~~~~ 898 (917)
T COG0474 884 TPLSLFEWLIAIAVA 898 (917)
T ss_pred CCCcHHHHHHHHHHH
Confidence 555544344334444
No 9
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=9.4e-117 Score=1081.50 Aligned_cols=806 Identities=24% Similarity=0.348 Sum_probs=645.7
Q ss_pred CCCCccccCCHHHHHHHhCCC-CCCCCHHHHHHHHHhcCCCccCCCC-CcHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC
Q 003313 17 CGGIDLARLPLDEVFGQLGTT-RQGLSSEDAEVRLKFFGSNKLEKKP-ENKFLKFLSFMWNPLSWVMETAALMAIALANG 94 (831)
Q Consensus 17 ~~~~~~~~~~~~~~~~~l~~~-~~GLs~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~i~ail~~~~~~~ 94 (831)
.-+.+||..|.+++.+.|+++ .+|||++|+++|+++||+|+++.++ .+.|+.|+++|++|+.++++++++++++....
T Consensus 12 ~~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~ 91 (997)
T TIGR01106 12 EVEMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGI 91 (997)
T ss_pred hccCCchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 346789999999999999998 6799999999999999999998755 56889999999999999999999998875321
Q ss_pred ------CCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEeCCCcCCCcEEEEcCCC
Q 003313 95 ------GGQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGD 168 (831)
Q Consensus 95 ------~~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~~G~ 168 (831)
.....+|++++++++++++++.+++++++|+++.+++++++.+++++|+|||++++|+++||||||+|.|++||
T Consensus 92 ~~~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd 171 (997)
T TIGR01106 92 QASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGD 171 (997)
T ss_pred hhccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCC
Confidence 11234789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceEEEecCCeEEEcccccCCCccccccCCC----------eeeecceeee-----------ccchhhhHHHhhhcc
Q 003313 169 VIPADARLLEGDPLKIDQSELTGESLTVTKETGD----------EVFSGLTCKH-----------VHSFFGKAADLVDST 227 (831)
Q Consensus 169 ~iPaDg~ll~g~~~~Vdes~LTGEs~pv~K~~g~----------~v~aGt~v~~-----------~~t~~g~~~~~~~~~ 227 (831)
+|||||++++|+.+.||||+|||||.|+.|.+++ .+|+||.+.+ .+|.+|++.+++++.
T Consensus 172 ~IPaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~ 251 (997)
T TIGR01106 172 RIPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGL 251 (997)
T ss_pred EEeeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhc
Confidence 9999999999977999999999999999998864 6999998876 789999999988766
Q ss_pred C-ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhHhhHH---------------H-HHHHHHHHHHHhhhcCce
Q 003313 228 E-VVGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRDRI---------------N-MLSVTLAIASYRLSQRGA 290 (831)
Q Consensus 228 ~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---------------~-~l~~~l~~~~~~l~~~~i 290 (831)
+ +++|+++.++++++++..+.++..++.+++.+ .....+...+ . .++++++.++.+|+++|+
T Consensus 252 ~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~i 330 (997)
T TIGR01106 252 ENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSL-ILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNC 330 (997)
T ss_pred ccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHCCc
Confidence 4 67999999999888744433222222222211 1112222111 1 456678889999999999
Q ss_pred EEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeec----CC-------CCC-----hHHHHHHHHHhccc-----
Q 003313 291 ITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVF----NR-------DMD-----KDILVLLAARASRL----- 349 (831)
Q Consensus 291 lvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~----~~-------~~~-----~~~~l~~a~~~~~~----- 349 (831)
++|+++++|+||++++||||||||||+|+|+|.+++++.. .. ..+ .+.++..++.|+..
T Consensus 331 lvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~ 410 (997)
T TIGR01106 331 LVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAG 410 (997)
T ss_pred EecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeeccc
Confidence 9999999999999999999999999999999999874211 00 011 12455556655321
Q ss_pred ----------cCCChHHHHHHHHhC----ChHHHhhccceeEEecCCCCCceEEEEEEcC---CCcEEEEEccchHHHhh
Q 003313 350 ----------ENQDAIDAAIINMLA----DPKEARANINEVHFLPFNPVDKRTAITYTDS---EGNWYRASKGAPEQILN 412 (831)
Q Consensus 350 ----------~~~~~~~~ai~~~~~----~~~~~~~~~~~l~~~~f~s~~k~~sv~v~~~---~g~~~~~~kGa~e~i~~ 412 (831)
..+||+|.|+++++. +..+.+..++.++.+||+|+||||++++... ++++++++|||||.|++
T Consensus 411 ~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~ 490 (997)
T TIGR01106 411 QENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILE 490 (997)
T ss_pred cCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHH
Confidence 125899999998864 2344567788999999999999999887632 24678999999999999
Q ss_pred hccC----------chhhHHHHHHHHHHHHhccCeeeeeeeecCCCCCC--------C---CCCCCceeeeeccccCCCC
Q 003313 413 MCQE----------KEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTE--------D---SPGGPRSFCGLLPLFDPPR 471 (831)
Q Consensus 413 ~~~~----------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~--------~---~~e~~l~~lG~i~~~D~lr 471 (831)
+|+. +++.++.+.+.+++++++|+||+++||+.+++++. + ..|+||+|+|+++++||+|
T Consensus 491 ~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr 570 (997)
T TIGR01106 491 RCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPR 570 (997)
T ss_pred HhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCCh
Confidence 9962 23456778888999999999999999998764311 1 2388999999999999999
Q ss_pred CChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC----------------------CCccccCCcCCCCCcc
Q 003313 472 HDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMY----------------------PSSLLLGRDKDENEAL 529 (831)
Q Consensus 472 ~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~----------------------~~~~~~~~~~~~~~~~ 529 (831)
++++++|++|+++||+++|+|||++.+|.++|+++|+..+.. ...++.|.+++.++++
T Consensus 571 ~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~~~ 650 (997)
T TIGR01106 571 AAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSE 650 (997)
T ss_pred HHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhCCHH
Confidence 999999999999999999999999999999999999964311 0247888888888899
Q ss_pred cHHHHHHhcC--cEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEec-CchHHHhhhcCEEEeCCChh
Q 003313 530 PVDELIEKAD--GFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVA-GATEAARGAADIVLTEPGLS 606 (831)
Q Consensus 530 ~~~~~~~~~~--v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~-~~~~~a~~aadivl~~~~~~ 606 (831)
++++.++++. ||||++|+||.++|+.+|+.|++|+|+|||+||+||||+|||||||| +|+|+|+++||+++++|||+
T Consensus 651 el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~ 730 (997)
T TIGR01106 651 QLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFA 730 (997)
T ss_pred HHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHH
Confidence 9999998875 99999999999999999999999999999999999999999999999 79999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCCCChHHHHHHHHhhccc-hhccccCCCCCC---CCC
Q 003313 607 VICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLLAL-IWEYDFPPFMVLIIAVLNDGT-IITISKGRVKSS---LRP 681 (831)
Q Consensus 607 ~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~---~~~ 681 (831)
+|++++++||++|+|+++++.|.++.|+..++..+++.+ ..+.|++|+|++|+|+++|.+ +++++++++++. ++|
T Consensus 731 ~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P 810 (997)
T TIGR01106 731 SIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQP 810 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCC
Confidence 999999999999999999999999999977666655544 456789999999999999985 799999887764 233
Q ss_pred Cccc-----hHH-HHHHHHHHHHHHHHHHHHHHHHHHhh-hcccc-cccc---------ccCCCc-------------HH
Q 003313 682 DGWK-----LNE-IFAAGIVIGNYLALVTILFYWVVVHT-DFFET-HFHV---------RSLSSN-------------TE 731 (831)
Q Consensus 682 ~~~~-----~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~-~~~~---------~~~~~~-------------~~ 731 (831)
+++. .+. +..+++..|++++++.+++|++.+.. ++.+. .++. .+.... ..
T Consensus 811 ~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 890 (997)
T TIGR01106 811 RNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEF 890 (997)
T ss_pred cCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhcccchhh
Confidence 3321 122 33445566989998888766654421 21110 0110 000000 01
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccCCCCCC--cCchHHHHHHHHHHHHHHHHHHHhhh--cccccccchhHHHHHHHHHHH
Q 003313 732 EISSAVHLQVSIISQALIFVTRSQSWSFL--ERPGALLMCAFVLAQLVATLIAVYAH--ISFAYISGIGWGWAGVIWLYS 807 (831)
Q Consensus 732 ~~~t~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 807 (831)
.++|++|.+++++|.++++++|+.+.+++ +.++++++.++++.+++..++ .|.+ -..+.+.+++|.+|+++++++
T Consensus 891 ~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~~~n~~l~~~~~~~~~l~~~~-~~~p~~~~~f~~~~l~~~~w~~~~~~~ 969 (997)
T TIGR01106 891 TCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFL-SYCPGMGVALRMYPLKPTWWFCAFPYS 969 (997)
T ss_pred hhhHHHHHHHHHHHHHHHHHhccCcccccccCCcCHHHHHHHHHHHHHHHHH-HHhhhhHHHhccccCCHHHHHHHHHHH
Confidence 46899999999999999999999764422 234556666666555554443 4443 346778888888888888899
Q ss_pred HHHHHHHHHHHHHHHhc
Q 003313 808 LVFYILLDIIKFTVRTL 824 (831)
Q Consensus 808 ~~~~~~~e~~k~~~r~~ 824 (831)
++.+++.|+.|++.|.+
T Consensus 970 ~~~~~~~~~~k~~~r~~ 986 (997)
T TIGR01106 970 LLIFVYDEIRKLIIRRN 986 (997)
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 89999999999988743
No 10
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=1.1e-115 Score=1063.50 Aligned_cols=771 Identities=26% Similarity=0.374 Sum_probs=639.3
Q ss_pred ccccCCHHHHHHHhCCC-CCCCC-HHHHHHHHHhcCCCccCCCC-CcHHHHHHHHH-HhHHHHHHHHHHHHHHHHhcCCC
Q 003313 21 DLARLPLDEVFGQLGTT-RQGLS-SEDAEVRLKFFGSNKLEKKP-ENKFLKFLSFM-WNPLSWVMETAALMAIALANGGG 96 (831)
Q Consensus 21 ~~~~~~~~~~~~~l~~~-~~GLs-~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~-~~~~~~~l~i~ail~~~~~~~~~ 96 (831)
+||.+|++++++.|+++ .+||| ++|+++|+++||+|+++.++ +++|+.|+++| ++|+.++++++++++++++
T Consensus 3 ~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g---- 78 (884)
T TIGR01522 3 QYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG---- 78 (884)
T ss_pred chhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc----
Confidence 68999999999999998 67999 99999999999999999765 67889999999 9999999999999999986
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEeCCCcCCCcEEEEcCCCccccceEE
Q 003313 97 QGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARL 176 (831)
Q Consensus 97 ~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~~G~~iPaDg~l 176 (831)
+|.+++.++++++++..+++++|+++++++++|+++.+++++|+|||++++|+++||||||+|.|++||+|||||+|
T Consensus 79 ---~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~i 155 (884)
T TIGR01522 79 ---NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRI 155 (884)
T ss_pred ---chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEE
Confidence 89999999989999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCeEEEcccccCCCccccccCCC--------------eeeecceeee-----------ccchhhhHHHhhhccC-cc
Q 003313 177 LEGDPLKIDQSELTGESLTVTKETGD--------------EVFSGLTCKH-----------VHSFFGKAADLVDSTE-VV 230 (831)
Q Consensus 177 l~g~~~~Vdes~LTGEs~pv~K~~g~--------------~v~aGt~v~~-----------~~t~~g~~~~~~~~~~-~~ 230 (831)
++|+++.||||+|||||.|+.|.+++ .+|+||.+.+ .+|++|++.++++++. .+
T Consensus 156 i~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~k 235 (884)
T TIGR01522 156 VEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPK 235 (884)
T ss_pred EEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCC
Confidence 99977999999999999999998863 7999999887 7899999999988764 68
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhHhhH---------------HH-HHHHHHHHHHHhhhcCceEEcc
Q 003313 231 GHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRDR---------------IN-MLSVTLAIASYRLSQRGAITKR 294 (831)
Q Consensus 231 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------l~-~l~~~l~~~~~~l~~~~ilvk~ 294 (831)
+|+|+.++++++++..+.++.+++.+++.+. ....+... ++ ++++++++++.||+|+|+++|+
T Consensus 236 t~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk~ 314 (884)
T TIGR01522 236 TPLQKSMDLLGKQLSLVSFGVIGVICLVGWF-QGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRK 314 (884)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCcccc
Confidence 9999999999987543332222222222222 12222211 11 4567888999999999999999
Q ss_pred chhhhhhcCceEEEecCCCccccCceEEEEEeeeecCC--------C---------------C--ChHHHHHHHHHhccc
Q 003313 295 MTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNR--------D---------------M--DKDILVLLAARASRL 349 (831)
Q Consensus 295 ~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~--------~---------------~--~~~~~l~~a~~~~~~ 349 (831)
++++|+||++++||||||||||+|+|+|.+++...... + . ..++++..++.|+..
T Consensus 315 ~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 394 (884)
T TIGR01522 315 LPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNA 394 (884)
T ss_pred hHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCCC
Confidence 99999999999999999999999999999986421000 0 0 113455555544432
Q ss_pred c--------CCChHHHHHHHHhCCh--HHHhhccceeEEecCCCCCceEEEEEEc-CCCcEEEEEccchHHHhhhccC--
Q 003313 350 E--------NQDAIDAAIINMLADP--KEARANINEVHFLPFNPVDKRTAITYTD-SEGNWYRASKGAPEQILNMCQE-- 416 (831)
Q Consensus 350 ~--------~~~~~~~ai~~~~~~~--~~~~~~~~~l~~~~f~s~~k~~sv~v~~-~~g~~~~~~kGa~e~i~~~~~~-- 416 (831)
. .+||+|.|+++++... ...+..++.++.+||+|.+|||+++++. .+|+++.++||+||.++++|..
T Consensus 395 ~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~ 474 (884)
T TIGR01522 395 KFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQ 474 (884)
T ss_pred eecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhh
Confidence 1 2479999999986432 2234568889999999999999998875 3567889999999999999963
Q ss_pred ---------chhhHHHHHHHHHHHHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCe
Q 003313 417 ---------KEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVC 487 (831)
Q Consensus 417 ---------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~ 487 (831)
+++.++++.+.+++++++|+|++++||+++ +++|+|+|+++++||+|++++++|++|+++|++
T Consensus 475 ~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~ 546 (884)
T TIGR01522 475 KKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVR 546 (884)
T ss_pred hcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC--------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCe
Confidence 123456677888899999999999999974 467999999999999999999999999999999
Q ss_pred EEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEc
Q 003313 488 VKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTG 567 (831)
Q Consensus 488 v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iG 567 (831)
++|+|||++.+|.++|+++||... ...++.|.+++..+++++++.+++..+|||++|+||.++|+.+|++|++|+|+|
T Consensus 547 v~miTGD~~~tA~~ia~~~Gi~~~--~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvG 624 (884)
T TIGR01522 547 IIMITGDSQETAVSIARRLGMPSK--TSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTG 624 (884)
T ss_pred EEEECCCCHHHHHHHHHHcCCCCC--CCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEEC
Confidence 999999999999999999999753 345678888998999999999999999999999999999999999999999999
Q ss_pred CCccChhhhccCCeeEEec-CchHHHhhhcCEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Q 003313 568 DGVNDAPALKKADIGIAVA-GATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVL-LAL 645 (831)
Q Consensus 568 DG~ND~~al~~AdvgIa~~-~~~~~a~~aadivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~-~~~ 645 (831)
||+||+|||++|||||||| +|+++++++||+++++|||+.|++++++||++|+|++|++.|.++.|+..+..+++ ..+
T Consensus 625 DGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~ 704 (884)
T TIGR01522 625 DGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLM 704 (884)
T ss_pred CCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 9999999999999999999 79999999999999999999999999999999999999999999999976555444 445
Q ss_pred hccCCCChHHHHHHHHhhccc-hhccccCCCCCC---CCCCcc----chHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 003313 646 IWEYDFPPFMVLIIAVLNDGT-IITISKGRVKSS---LRPDGW----KLNEIFAAGIVIGNYLALVTILFYWVVVHTDFF 717 (831)
Q Consensus 646 ~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~---~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 717 (831)
..+.|++|+|++|+|+++|.+ +++++++++++. ++|+++ ..+.++..+++.|+++++++++.|++.+..
T Consensus 705 ~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--- 781 (884)
T TIGR01522 705 GFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQD--- 781 (884)
T ss_pred cCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHcC---
Confidence 567899999999999999987 589999887654 223322 235567777888988887777665543210
Q ss_pred ccccccccCCCcHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCc---CchHHHHHHHHHHHHHHHHHHHhhh--cccccc
Q 003313 718 ETHFHVRSLSSNTEEISSAVHLQVSIISQALIFVTRSQSWSFLE---RPGALLMCAFVLAQLVATLIAVYAH--ISFAYI 792 (831)
Q Consensus 718 ~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~ 792 (831)
+ ......+|++|.+++++|+++.+++|+++.+++. ..|++++.++++..++..++ .|.+ -.++.+
T Consensus 782 ----~-----~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~p~~~~~f~~ 851 (884)
T TIGR01522 782 ----G-----VITARDTTMTFTCFVFFDMFNALACRSQTKSVFEIGFFSNRMFNYAVGGSIIGQLLV-IYFPPLQSVFQT 851 (884)
T ss_pred ----C-----cchhhHHHHHHHHHHHHHHHHHHHHccCCccccccCcccCHHHHHHHHHHHHHHHHH-HHHHHHHHHHcC
Confidence 1 1234568999999999999999999997654432 23446666666655554433 4433 245677
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003313 793 SGIGWGWAGVIWLYSLVFYILLDIIKFTVR 822 (831)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~e~~k~~~r 822 (831)
.|++|..|+++++++++.+++.|++|++.|
T Consensus 852 ~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~ 881 (884)
T TIGR01522 852 EALSIKDLLFLLLITSSVCIVDEIRKKVER 881 (884)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 888898888888999999999999999876
No 11
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=3e-115 Score=1065.89 Aligned_cols=790 Identities=22% Similarity=0.315 Sum_probs=633.0
Q ss_pred CHHHHHHHhCCC-CCCCC--HHHHHHHHHhcCCCccCCCCC-cHHHHHHHHHHhHHHHHHHHHHHHHHHHhc------CC
Q 003313 26 PLDEVFGQLGTT-RQGLS--SEDAEVRLKFFGSNKLEKKPE-NKFLKFLSFMWNPLSWVMETAALMAIALAN------GG 95 (831)
Q Consensus 26 ~~~~~~~~l~~~-~~GLs--~~~~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~l~i~ail~~~~~~------~~ 95 (831)
+++++++.|+++ ++||| ++|+++|+++||+|+++.+++ ++|+.++++|++|++++|+++++++++++. ..
T Consensus 43 ~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~ 122 (941)
T TIGR01517 43 GAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKA 122 (941)
T ss_pred CHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccC
Confidence 688999999998 67999 999999999999999998765 678889999999999999999999999762 12
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCeEEEEECCEEEEEeCCCcCCCcEEEEcCCCccccce
Q 003313 96 GQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAH-LTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADA 174 (831)
Q Consensus 96 ~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~-~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~~G~~iPaDg 174 (831)
++..+|+++++++++++++.+++++++++++++.+++++. .+++++|+|||++++|++++|||||+|.|++||+|||||
T Consensus 123 ~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~ 202 (941)
T TIGR01517 123 DTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADG 202 (941)
T ss_pred ccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccE
Confidence 3345899999999999999999999999999999999864 477999999999999999999999999999999999999
Q ss_pred EEEecCCeEEEcccccCCCccccccCCCe--eeecceeee-----------ccchhhhHHHhhhccCccCcHHHHHHHHH
Q 003313 175 RLLEGDPLKIDQSELTGESLTVTKETGDE--VFSGLTCKH-----------VHSFFGKAADLVDSTEVVGHFQQVLTSIG 241 (831)
Q Consensus 175 ~ll~g~~~~Vdes~LTGEs~pv~K~~g~~--v~aGt~v~~-----------~~t~~g~~~~~~~~~~~~~~l~~~~~~~~ 241 (831)
+|++|+++.||||+|||||.|+.|.+++. +|+||.+.+ .+|++|++.+++..+..++|+++.+++++
T Consensus 203 ~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~~~t~l~~~~~~~~ 282 (941)
T TIGR01517 203 VFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEGEDTPLQEKLSELA 282 (941)
T ss_pred EEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCCCCCcHHHHHHHHH
Confidence 99999889999999999999999998775 999999887 78999999999887777789999999988
Q ss_pred HHHHHHHHHHHHH---HHHHHhhhc---h---------hhHhhHH----H------------HHHHHHHHHHHhhhcCce
Q 003313 242 NFCICFITVGMIL---EIIVMFPIQ---H---------RLYRDRI----N------------MLSVTLAIASYRLSQRGA 290 (831)
Q Consensus 242 ~~~~~~~~~~~~~---~~~~~~~~~---~---------~~~~~~l----~------------~l~~~l~~~~~~l~~~~i 290 (831)
++...+.++.+++ .+++.+... . ..+...+ . .++++++.++.+|+|+|+
T Consensus 283 ~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~i 362 (941)
T TIGR01517 283 GLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNN 362 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCC
Confidence 7643322221111 111111110 0 0111111 1 456778889999999999
Q ss_pred EEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeecC---CC----CC--hHHHHH-HHHHhccc-----------
Q 003313 291 ITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFN---RD----MD--KDILVL-LAARASRL----------- 349 (831)
Q Consensus 291 lvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~---~~----~~--~~~~l~-~a~~~~~~----------- 349 (831)
++|+++++|+||++++||||||||||+|+|+|.+++..... .+ .+ ..+++. .+++++..
T Consensus 363 lvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~ 442 (941)
T TIGR01517 363 LVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRA 442 (941)
T ss_pred EEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccc
Confidence 99999999999999999999999999999999998753210 00 01 122233 23333321
Q ss_pred cCCChHHHHHHHHhC----ChHHHhhccceeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccCc--------
Q 003313 350 ENQDAIDAAIINMLA----DPKEARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQEK-------- 417 (831)
Q Consensus 350 ~~~~~~~~ai~~~~~----~~~~~~~~~~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~~-------- 417 (831)
..+||+|.|+++++. +..+.+..++.++.+||+|++|+|+++++..+++++.++|||||.++++|+..
T Consensus 443 ~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~ 522 (941)
T TIGR01517 443 FIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEAT 522 (941)
T ss_pred cCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcc
Confidence 125899999998864 23334456778889999999999999998766778899999999999999631
Q ss_pred --hhhHHHHHHHHHHHHhccCeeeeeeeecCCCCC---CCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEEEc
Q 003313 418 --EEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMT---EDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMIT 492 (831)
Q Consensus 418 --~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~---~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~T 492 (831)
++.++++.+.+++++++|+|++++||++++.++ .+..|++|+|+|+++++||+|++++++|++||++||+++|+|
T Consensus 523 ~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miT 602 (941)
T TIGR01517 523 PISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVT 602 (941)
T ss_pred cCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEEC
Confidence 013466788889999999999999999876432 233578999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccC
Q 003313 493 GDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVND 572 (831)
Q Consensus 493 GD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND 572 (831)
||++.||.++|+++||..+ +..++.|.+++.+.++++++++++..+|||++|+||.++|+.+|++|++|+|+|||+||
T Consensus 603 GD~~~tA~~iA~~~GI~~~--~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvND 680 (941)
T TIGR01517 603 GDNIDTAKAIARNCGILTF--GGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTND 680 (941)
T ss_pred CCChHHHHHHHHHcCCCCC--CceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCch
Confidence 9999999999999999753 24678899999889999999999999999999999999999999999999999999999
Q ss_pred hhhhccCCeeEEec-CchHHHhhhcCEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhccCC
Q 003313 573 APALKKADIGIAVA-GATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVL-LALIWEYD 650 (831)
Q Consensus 573 ~~al~~AdvgIa~~-~~~~~a~~aadivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~-~~~~~~~~ 650 (831)
+|||++|||||||| +|+|+|+++||+++++|+|++|++++++||++|+|++|++.|.+++|+..++..++ .++..+.|
T Consensus 681 apALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~p 760 (941)
T TIGR01517 681 APALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSP 760 (941)
T ss_pred HHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999999 99999999999999999999999999999999999999999999999976555444 44556789
Q ss_pred CChHHHHHHHHhhccc-hhccccCCCCCC---CCCCccc----hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccc
Q 003313 651 FPPFMVLIIAVLNDGT-IITISKGRVKSS---LRPDGWK----LNEIFAAGIVIGNYLALVTILFYWVVVHTDFFETHFH 722 (831)
Q Consensus 651 ~~~~~~l~~~~~~~~~-~~~l~~~~~~~~---~~~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 722 (831)
++|+|++|+|+++|.+ +++++++++++. ++|+++. .+.++..++..|++++++.++++++... ++....+
T Consensus 761 l~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 838 (941)
T TIGR01517 761 LTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGS--IFDVSGP 838 (941)
T ss_pred HHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhcccCc
Confidence 9999999999999975 799999887764 2343332 3556777888899988888866654431 2110000
Q ss_pred cccCCCcHHHHHHHHHHHHHHHHHHHhhhhccCCC-C-CCc-CchHHHHHHHHHHHHHHHHHHHhhhcccccccchhHHH
Q 003313 723 VRSLSSNTEEISSAVHLQVSIISQALIFVTRSQSW-S-FLE-RPGALLMCAFVLAQLVATLIAVYAHISFAYISGIGWGW 799 (831)
Q Consensus 723 ~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~-~-~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (831)
...........+|++|.+++++|+++.+++|+.+. . +.. ..+++++.++++..++..++..+ .-..|.+.+++|..
T Consensus 839 ~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~~-~~~~f~~~~l~~~~ 917 (941)
T TIGR01517 839 DEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQVIIVEF-GGSFFSTVSLSIEQ 917 (941)
T ss_pred ccccccccchhhHHHHHHHHHHHHHHHHHHccCCcccccccccccHHHHHHHHHHHHHHHHHHHH-HHHHhcccCCCHHH
Confidence 00000123467899999999999999999998653 2 211 12334555555444444333222 13456777888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 003313 800 AGVIWLYSLVFYILLDIIKFT 820 (831)
Q Consensus 800 ~~~~~~~~~~~~~~~e~~k~~ 820 (831)
|+++++++++.+++.|+.|.+
T Consensus 918 w~~~~~~~~~~~~~~~~~~~~ 938 (941)
T TIGR01517 918 WIGCVLLGMLSLIFGVLLRLI 938 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 888888898888888988875
No 12
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-118 Score=991.70 Aligned_cols=786 Identities=23% Similarity=0.326 Sum_probs=629.5
Q ss_pred HHHHHHHhCCC-CCCCCH--HHHHHHHHhcCCCccCCCCC-cHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC-CCCCch
Q 003313 27 LDEVFGQLGTT-RQGLSS--EDAEVRLKFFGSNKLEKKPE-NKFLKFLSFMWNPLSWVMETAALMAIALANGG-GQGPDW 101 (831)
Q Consensus 27 ~~~~~~~l~~~-~~GLs~--~~~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~l~i~ail~~~~~~~~-~~~~~~ 101 (831)
++++++.|+++ ..|++. +|.++|++.||.|.+|++++ ++|+..|+.+.+.-.++|.++|++|+.++... +....|
T Consensus 103 v~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW 182 (1034)
T KOG0204|consen 103 VEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGW 182 (1034)
T ss_pred HHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCccc
Confidence 88999999999 779987 89999999999999999875 55667789999999999999999999988543 446689
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCeEEEEECCEEEEEeCCCcCCCcEEEEcCCCccccceEEEecC
Q 003313 102 QDSVGIVCLLIINSSISFIEESNAENATAALMAH-LTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGD 180 (831)
Q Consensus 102 ~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~-~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~g~ 180 (831)
++++.|++.+++..++....+|+.+++.++|++. ...+..|+|||+.++|+..|||||||+.|+.||.+||||++++|+
T Consensus 183 ~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn 262 (1034)
T KOG0204|consen 183 IEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGN 262 (1034)
T ss_pred ccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEecc
Confidence 9999998888777777788888888888887653 345789999999999999999999999999999999999999999
Q ss_pred CeEEEcccccCCCccccccC--CCeeeecceeee-----------ccchhhhHHHhhhccC-ccCcHHHHHHHHHHH---
Q 003313 181 PLKIDQSELTGESLTVTKET--GDEVFSGLTCKH-----------VHSFFGKAADLVDSTE-VVGHFQQVLTSIGNF--- 243 (831)
Q Consensus 181 ~~~Vdes~LTGEs~pv~K~~--g~~v~aGt~v~~-----------~~t~~g~~~~~~~~~~-~~~~l~~~~~~~~~~--- 243 (831)
++.+|||++||||+++.|.+ +..+++||.+.+ .+|..|++...+.... +++|+|-.+++++..
T Consensus 263 ~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk 342 (1034)
T KOG0204|consen 263 SLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGK 342 (1034)
T ss_pred ceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHH
Confidence 99999999999999999987 458999999987 8999999998888775 889999888876543
Q ss_pred -HHHHHHHHHHHHHHHHhhhch-----h---hHh-----------------------hHHH-HHHHHHHHHHHhhhcCce
Q 003313 244 -CICFITVGMILEIIVMFPIQH-----R---LYR-----------------------DRIN-MLSVTLAIASYRLSQRGA 290 (831)
Q Consensus 244 -~~~~~~~~~~~~~~~~~~~~~-----~---~~~-----------------------~~l~-~l~~~l~~~~~~l~~~~i 290 (831)
.+.+.++ .++.+++.|+... . .+. ++++ .++++||++++||.+.+.
T Consensus 343 ~Gl~~A~~-~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~ 421 (1034)
T KOG0204|consen 343 IGLLFAAL-TFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNN 421 (1034)
T ss_pred HHHHHHHH-HHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchh
Confidence 2222222 2222333333210 0 110 0111 577889999999999999
Q ss_pred EEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeecCCC--------CChH--HHH-HHHHHhcc-----------
Q 003313 291 ITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRD--------MDKD--ILV-LLAARASR----------- 348 (831)
Q Consensus 291 lvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~--------~~~~--~~l-~~a~~~~~----------- 348 (831)
+||+++|||++|+.++||+|||||||+|+|+|.+.++....+. .++. +++ .-.+.++.
T Consensus 422 LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~ 501 (1034)
T KOG0204|consen 422 LVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGE 501 (1034)
T ss_pred HHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCc
Confidence 9999999999999999999999999999999999876432211 2221 111 11121111
Q ss_pred --ccCCChHHHHHHHHh----CChHHHhhccceeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccC------
Q 003313 349 --LENQDAIDAAIINML----ADPKEARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQE------ 416 (831)
Q Consensus 349 --~~~~~~~~~ai~~~~----~~~~~~~~~~~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~------ 416 (831)
...++|.|+|++.+. .+....+...+.++.+||+|.+|+|+++++.++|..|.++|||+|.++.+|..
T Consensus 502 ~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g 581 (1034)
T KOG0204|consen 502 QPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNG 581 (1034)
T ss_pred CccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCC
Confidence 112589999999885 45666788889999999999999999999987777459999999999999974
Q ss_pred -----chhhHHHHHHHHHHHHhccCeeeeeeeecCCCC-------C-CCCCCCCceeeeeccccCCCCCChHHHHHHHHh
Q 003313 417 -----KEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEM-------T-EDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALK 483 (831)
Q Consensus 417 -----~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~-------~-~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~ 483 (831)
+++.+..+++.++.|+++|+|++++||++.... + ++..+.+|+++|+++++||+|||++++|+.|++
T Consensus 582 ~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~ 661 (1034)
T KOG0204|consen 582 ELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQR 661 (1034)
T ss_pred CEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHH
Confidence 234456888999999999999999999984322 1 245678999999999999999999999999999
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEE
Q 003313 484 LGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVV 563 (831)
Q Consensus 484 ~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v 563 (831)
|||+|.|+||||..||++||.+|||.++..+...+.|.++.+.+++++++++++.+|+||.+|.||..+|+.++++|++|
T Consensus 662 AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VV 741 (1034)
T KOG0204|consen 662 AGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVV 741 (1034)
T ss_pred cCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcEE
Confidence 99999999999999999999999998876666789999999999999999999999999999999999999999999999
Q ss_pred EEEcCCccChhhhccCCeeEEec-CchHHHhhhcCEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH-HHHH
Q 003313 564 GMTGDGVNDAPALKKADIGIAVA-GATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIV-LSFV 641 (831)
Q Consensus 564 ~~iGDG~ND~~al~~AdvgIa~~-~~~~~a~~aadivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~-~~~~ 641 (831)
+++|||+||+|||++||||.||| .|||+|||+||+|++||||++|+++++|||++|.||+|+++|+++.|+..+ +.+.
T Consensus 742 AVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv 821 (1034)
T KOG0204|consen 742 AVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFV 821 (1034)
T ss_pred EEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhh
Confidence 99999999999999999999999 999999999999999999999999999999999999999999999998544 4444
Q ss_pred HHHHhccCCCChHHHHHHHHhhccc-hhccccCCCCCC---CCC----CccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003313 642 LLALIWEYDFPPFMVLIIAVLNDGT-IITISKGRVKSS---LRP----DGWKLNEIFAAGIVIGNYLALVTILFYWVVVH 713 (831)
Q Consensus 642 ~~~~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~---~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 713 (831)
.+......|++++|+||+|+++|-+ +++|+++++.+. ++| ..+..+.+++..+.+++|+.++.+.+.+...
T Consensus 822 ~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~- 900 (1034)
T KOG0204|consen 822 SACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGK- 900 (1034)
T ss_pred hhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcch-
Confidence 4445556899999999999999988 699999988764 222 3344567888888999999988886654432
Q ss_pred hhccccccccccCC-CcHHHHHHHHHHHHHHHHHHHhhhhccCC-CC-CCcCchHHHHHHHHHHHHHHHHHHHhhhcccc
Q 003313 714 TDFFETHFHVRSLS-SNTEEISSAVHLQVSIISQALIFVTRSQS-WS-FLERPGALLMCAFVLAQLVATLIAVYAHISFA 790 (831)
Q Consensus 714 ~~~~~~~~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~~~r~~~-~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 790 (831)
.. |+..+.. ..+.+..|++|.+++++|.++-++.|... .. |.+...++++++++...++.+++.+.....++
T Consensus 901 -~i----f~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N~~F~~ii~~T~v~QviIveF~g~~~ 975 (1034)
T KOG0204|consen 901 -SI----FGLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRNRLFCVIITITVVSQVIIVEFGGAFF 975 (1034)
T ss_pred -hh----hccCCCCCCchhhheeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcCceEEEEeeeeeehhhhhhhhcCcce
Confidence 11 2221111 12445669999999999999999999855 22 22111112333333333332322222223456
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 003313 791 YISGIGWGWAGVIWLYSLVFYILLDIIKF 819 (831)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~e~~k~ 819 (831)
...+++|..|++++.+.+..++.-.+.|.
T Consensus 976 st~~L~~~qWl~ci~~g~~sl~~g~~ik~ 1004 (1034)
T KOG0204|consen 976 STTPLSLTQWLWCIFIGVLSLPWGQLLKC 1004 (1034)
T ss_pred eeecccHHHHHHHHHHHHHHHHHHHHhee
Confidence 77888888887777777776666666664
No 13
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=7.7e-107 Score=987.94 Aligned_cols=752 Identities=27% Similarity=0.359 Sum_probs=598.9
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHhcCC---CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEEC
Q 003313 69 FLSFMWNPLSWVMETAALMAIALANGG---GQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRD 145 (831)
Q Consensus 69 ~~~~~~~~~~~~l~i~ail~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rd 145 (831)
++++|++|+.++|+++++++++++... ....+|.++++|+++++++..+++++|+|+++++++|++..+++++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 468999999999999999999986321 22358999999999999999999999999999999999999999999999
Q ss_pred CEEEEEeCCCcCCCcEEEEcCCCccccceEEEecCCeEEEcccccCCCccccccCC-------------Ceeeecceeee
Q 003313 146 GQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKETG-------------DEVFSGLTCKH 212 (831)
Q Consensus 146 g~~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~g~~~~Vdes~LTGEs~pv~K~~g-------------~~v~aGt~v~~ 212 (831)
|++++|+++||||||+|.|++||+|||||+|++|+++.||||+|||||.|+.|.++ +.+|+||.+.+
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~ 160 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVA 160 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEec
Confidence 99999999999999999999999999999999997799999999999999999875 78999999987
Q ss_pred -----------ccchhhhHHHhhhccC-ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-c----hhhH----h---
Q 003313 213 -----------VHSFFGKAADLVDSTE-VVGHFQQVLTSIGNFCICFITVGMILEIIVMFPI-Q----HRLY----R--- 268 (831)
Q Consensus 213 -----------~~t~~g~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~----~--- 268 (831)
.+|..|++.+.++..+ +++|+|+.+++++.++..+.++.+++.+++.... . ...+ .
T Consensus 161 G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (917)
T TIGR01116 161 GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYF 240 (917)
T ss_pred ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHH
Confidence 7999999999887764 7899999999998765433322222222211100 0 0001 1
Q ss_pred -hHHH------------HHHHHHHHHHHhhhcCceEEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeec-----
Q 003313 269 -DRIN------------MLSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVF----- 330 (831)
Q Consensus 269 -~~l~------------~l~~~l~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~----- 330 (831)
.++. .+++++++++++|+++|+++|+++++|+||++++||||||||||+|+|+|.+++....
T Consensus 241 ~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~ 320 (917)
T TIGR01116 241 KIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSL 320 (917)
T ss_pred HHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccccc
Confidence 1111 4567888999999999999999999999999999999999999999999999864210
Q ss_pred ------CCCCC-------------------hHHHHHHHHHhccc------------cCCChHHHHHHHHhCChH------
Q 003313 331 ------NRDMD-------------------KDILVLLAARASRL------------ENQDAIDAAIINMLADPK------ 367 (831)
Q Consensus 331 ------~~~~~-------------------~~~~l~~a~~~~~~------------~~~~~~~~ai~~~~~~~~------ 367 (831)
+..++ .+.++..++.|+.. ..+||.|.|++.++.+.+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~ 400 (917)
T TIGR01116 321 NEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKN 400 (917)
T ss_pred ceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhc
Confidence 00000 12344455555431 125999999998753211
Q ss_pred --------------HHhhccceeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccC-----------chhhHH
Q 003313 368 --------------EARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQE-----------KEEIGG 422 (831)
Q Consensus 368 --------------~~~~~~~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~-----------~~~~~~ 422 (831)
..+..++.++.+||+|+||||++++++ ++++++++|||||.|+++|+. +++.++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~ 479 (917)
T TIGR01116 401 GVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKN 479 (917)
T ss_pred ccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHH
Confidence 124567789999999999999999875 467889999999999999963 123466
Q ss_pred HHHHHHHHHHh-ccCeeeeeeeecCCCCC----------CCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEEE
Q 003313 423 KVHEIINKLAE-KGLRSLAVAVQEVPEMT----------EDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMI 491 (831)
Q Consensus 423 ~~~~~~~~~~~-~G~r~l~~a~~~~~~~~----------~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~ 491 (831)
++.+.++++++ +|+||+++||+.++.++ .+++|++|+|+|+++++||+|++++++|++||++|++++|+
T Consensus 480 ~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~mi 559 (917)
T TIGR01116 480 TILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMI 559 (917)
T ss_pred HHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEe
Confidence 78888999999 99999999999986421 24568999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHhCCCCCCCC--CccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCC
Q 003313 492 TGDHLAIAKETGRRLGIGTNMYP--SSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDG 569 (831)
Q Consensus 492 TGD~~~~a~~ia~~~gi~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG 569 (831)
|||+..+|.++|+++|+..+..+ ...+.|.+++.+++++..+...+..+|||++|+||.++|+.+|+.|++|+|+|||
T Consensus 560 TGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG 639 (917)
T TIGR01116 560 TGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDG 639 (917)
T ss_pred cCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecCC
Confidence 99999999999999999753211 2356777777777888888888889999999999999999999999999999999
Q ss_pred ccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcc
Q 003313 570 VNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLL-ALIWE 648 (831)
Q Consensus 570 ~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~-~~~~~ 648 (831)
.||+|||++||||||||+|++.+|++||+++.+|||++|++++++||++|+|+++++.|.++.|+..++..+++ .+.++
T Consensus 640 ~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~ 719 (917)
T TIGR01116 640 VNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGIP 719 (917)
T ss_pred cchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999776666554 34466
Q ss_pred CCCChHHHHHHHHhhccc-hhccccCCCCCCC--CC-C----ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcccc
Q 003313 649 YDFPPFMVLIIAVLNDGT-IITISKGRVKSSL--RP-D----GWKLNEIFAAGIVIGNYLALVTILFYWVVVHT-DFFET 719 (831)
Q Consensus 649 ~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~--~~-~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~ 719 (831)
.|++|+|++|+|+++|.+ +++++.++++++. +| + +...+..+..++..|+++++++++.|++.+.. ++...
T Consensus 720 ~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 799 (917)
T TIGR01116 720 EGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTGC 799 (917)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccc
Confidence 899999999999999965 6889988876542 22 2 12235567778888999998877666554432 21110
Q ss_pred --cc--ccccCC-------CcHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCc---CchHHHHHHHHHHHHHHHHHHHhh
Q 003313 720 --HF--HVRSLS-------SNTEEISSAVHLQVSIISQALIFVTRSQSWSFLE---RPGALLMCAFVLAQLVATLIAVYA 785 (831)
Q Consensus 720 --~~--~~~~~~-------~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~ 785 (831)
.. +..+.. ....+.+|++|.+++++|+++.+++|+++.+++. ..|.+++.+++++.++..++ .|.
T Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~-~~v 878 (917)
T TIGR01116 800 DEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMALHFLI-LYV 878 (917)
T ss_pred cccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCCcccccccCCccCHHHHHHHHHHHHHHHHH-HHh
Confidence 00 000000 0134578999999999999999999997644332 23445555555555544333 444
Q ss_pred h--cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003313 786 H--ISFAYISGIGWGWAGVIWLYSLVFYILLDIIKFTVR 822 (831)
Q Consensus 786 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~k~~~r 822 (831)
+ -..|.+.|++|..|+++++++++.++.+|+.|++.|
T Consensus 879 ~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 879 PFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3 245678888999998889999999999999998764
No 14
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.4e-108 Score=906.98 Aligned_cols=811 Identities=23% Similarity=0.362 Sum_probs=660.4
Q ss_pred CCccccCCHHHHHHHhCCC-CCCCCHHHHHHHHHhcCCCccCCCC-CcHHHHHHHHHHhHHHHHHHHHHHHHHHHhc---
Q 003313 19 GIDLARLPLDEVFGQLGTT-RQGLSSEDAEVRLKFFGSNKLEKKP-ENKFLKFLSFMWNPLSWVMETAALMAIALAN--- 93 (831)
Q Consensus 19 ~~~~~~~~~~~~~~~l~~~-~~GLs~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~i~ail~~~~~~--- 93 (831)
.+|.|.+|++|+.+++.++ .+|||.+++.+++.+.|+|.+++|+ .+.|.+|.+|+++.+.++++++++++++.+.
T Consensus 36 ~~~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~ 115 (1019)
T KOG0203|consen 36 SMDDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQA 115 (1019)
T ss_pred eeccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhc
Confidence 4778999999999999999 8899999999999999999998776 5678999999999999999999999998542
Q ss_pred ---CCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEeCCCcCCCcEEEEcCCCcc
Q 003313 94 ---GGGQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVI 170 (831)
Q Consensus 94 ---~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~~G~~i 170 (831)
+.......+.+.++..++++..++.++|+.+..+.+++++++.|+.+.|+|||+..++..++||+||+|.++-||+|
T Consensus 116 s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~GdrV 195 (1019)
T KOG0203|consen 116 STEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDLVEVKGGDRV 195 (1019)
T ss_pred ccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccceeeccCCcc
Confidence 11112334456666667777888999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEecCCeEEEcccccCCCccccccCC----------Ceeeecceeee-----------ccchhhhHHHhhhc-cC
Q 003313 171 PADARLLEGDPLKIDQSELTGESLTVTKETG----------DEVFSGLTCKH-----------VHSFFGKAADLVDS-TE 228 (831)
Q Consensus 171 PaDg~ll~g~~~~Vdes~LTGEs~pv~K~~g----------~~v~aGt~v~~-----------~~t~~g~~~~~~~~-~~ 228 (831)
|||.+++++..++||+|+|||||+|..+.+. |..|.+|.+.+ .+|.+|+++.+-.. ..
T Consensus 196 PADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~~~~ 275 (1019)
T KOG0203|consen 196 PADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASGLED 275 (1019)
T ss_pred cceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhccCCC
Confidence 9999999999999999999999999998763 56777777665 79999999988766 35
Q ss_pred ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhHhh---------------HHH-HHHHHHHHHHHhhhcCceEE
Q 003313 229 VVGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRD---------------RIN-MLSVTLAIASYRLSQRGAIT 292 (831)
Q Consensus 229 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~l~-~l~~~l~~~~~~l~~~~ilv 292 (831)
.++|++..++.+..+.....++..++.+.+.... +..+.. ++. .+++.++.-.+||+++++++
T Consensus 276 ~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~-gy~~l~avv~~i~iivAnvPeGL~~tvTv~LtltakrMa~Knc~v 354 (1019)
T KOG0203|consen 276 GKTPIAKEIEHFIHIITGVAIFLGISFFILALIL-GYEWLRAVVFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLV 354 (1019)
T ss_pred CCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhh-cchhHHHhhhhheeEEecCcCCccceehhhHHHHHHHHhhceeEE
Confidence 7889999988887763322222111111111111 222221 121 46778889999999999999
Q ss_pred ccchhhhhhcCceEEEecCCCccccCceEEEEEeeeecCC----------------CCChHHHHHHHHHhccc-------
Q 003313 293 KRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNR----------------DMDKDILVLLAARASRL------- 349 (831)
Q Consensus 293 k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~----------------~~~~~~~l~~a~~~~~~------- 349 (831)
|+++++|+||+.++||+|||||||+|+|+|.+.+.+..-. +..-..+.+++..|++.
T Consensus 355 knLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~ 434 (1019)
T KOG0203|consen 355 KNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIATLCNRAVFKPGQD 434 (1019)
T ss_pred eeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHHHHhCcceeccccc
Confidence 9999999999999999999999999999999987531100 01113466667666542
Q ss_pred --------cCCChHHHHHHHHh----CChHHHhhccceeEEecCCCCCceEEEEEEcCC---CcEEEEEccchHHHhhhc
Q 003313 350 --------ENQDAIDAAIINML----ADPKEARANINEVHFLPFNPVDKRTAITYTDSE---GNWYRASKGAPEQILNMC 414 (831)
Q Consensus 350 --------~~~~~~~~ai~~~~----~~~~~~~~~~~~l~~~~f~s~~k~~sv~v~~~~---g~~~~~~kGa~e~i~~~~ 414 (831)
..+|+.+.|+++++ ++..+.++.++.+..+||+|.+|+.-.+....+ .+..+.+|||||.++++|
T Consensus 435 dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~C 514 (1019)
T KOG0203|consen 435 DVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRC 514 (1019)
T ss_pred CCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhc
Confidence 23689999999986 355677889999999999999999887776443 567888999999999999
Q ss_pred cC----------chhhHHHHHHHHHHHHhccCeeeeeeeecCCCCC-----------CCCCCCCceeeeeccccCCCCCC
Q 003313 415 QE----------KEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMT-----------EDSPGGPRSFCGLLPLFDPPRHD 473 (831)
Q Consensus 415 ~~----------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~-----------~~~~e~~l~~lG~i~~~D~lr~~ 473 (831)
+. ++...+.+.+...++...|-||++++++.+++++ -+...++|.|+|++++-||||..
T Consensus 515 STi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~ 594 (1019)
T KOG0203|consen 515 STILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRAA 594 (1019)
T ss_pred cceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccccchhhccCCCccc
Confidence 74 3456677888888999999999999999987553 12345789999999999999999
Q ss_pred hHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC----------------------CCccccCCcCCCCCcccH
Q 003313 474 SSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMY----------------------PSSLLLGRDKDENEALPV 531 (831)
Q Consensus 474 ~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~----------------------~~~~~~~~~~~~~~~~~~ 531 (831)
+++++..||.+||+++|+|||++.||+++|++.||..... ...+++|.++..++.+++
T Consensus 595 vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~ql 674 (1019)
T KOG0203|consen 595 VPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQL 674 (1019)
T ss_pred CchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccccCHHHH
Confidence 9999999999999999999999999999999999754110 123578889999999999
Q ss_pred HHHHHhcC--cEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEec-CchHHHhhhcCEEEeCCChhHH
Q 003313 532 DELIEKAD--GFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVA-GATEAARGAADIVLTEPGLSVI 608 (831)
Q Consensus 532 ~~~~~~~~--v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~-~~~~~a~~aadivl~~~~~~~i 608 (831)
++++.+.. ||||.||+||..||+.+|++|.+|+++|||+||+||||.|||||||| .|+|++|+|||+||+||||++|
T Consensus 675 d~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASI 754 (1019)
T KOG0203|consen 675 DELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASI 754 (1019)
T ss_pred HHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcchhh
Confidence 99998765 89999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhccCCCChHHHHHHHHhhccc-hhccccCCCCCC---CCCCc
Q 003313 609 CSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVL-LALIWEYDFPPFMVLIIAVLNDGT-IITISKGRVKSS---LRPDG 683 (831)
Q Consensus 609 ~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~---~~~~~ 683 (831)
+..+++||-+|+|.||.+.|.++.|+..+..++. .++..|.|+.++++|.+.+.+|++ +++++|+.++.. ++|++
T Consensus 755 VtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~aEsDIM~r~PR~ 834 (1019)
T KOG0203|consen 755 VTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAYEKAESDIMLRPPRN 834 (1019)
T ss_pred eeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhccCchhhHHhcCCCC
Confidence 9999999999999999999999999976555544 456689999999999999999987 699999987654 22332
Q ss_pred -----c-chHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhccccc-c---------ccccCCCcH-------------HHH
Q 003313 684 -----W-KLNEIFAAGIVIGNYLALVTILFYWV-VVHTDFFETH-F---------HVRSLSSNT-------------EEI 733 (831)
Q Consensus 684 -----~-~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~-~---------~~~~~~~~~-------------~~~ 733 (831)
+ +.+-+...++..|+++++.+|+.|+. ++..+|+|.. . +++++.+++ .+.
T Consensus 835 p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeWtyeqRk~le~tc 914 (1019)
T KOG0203|consen 835 PKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEWTYEQRKYLEYTC 914 (1019)
T ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccccHHHHHHHHHhh
Confidence 2 23445556688899999999866554 4555666532 1 122222221 145
Q ss_pred HHHHHHHHHHHHHHHhhhhccCCCC--CCcCchHHHHHHHHHHHHHHHHHHHhhh--cccccccchhHHHHHHHHHHHHH
Q 003313 734 SSAVHLQVSIISQALIFVTRSQSWS--FLERPGALLMCAFVLAQLVATLIAVYAH--ISFAYISGIGWGWAGVIWLYSLV 809 (831)
Q Consensus 734 ~t~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 809 (831)
+|+.|+++++.|++..+.+.+++-+ -++..||.++++++.-+.+++++ .|.+ ...+++.|+.|.||+..+.++++
T Consensus 915 ~taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~~La~fl-~y~pg~~~~l~~~pl~~~~wl~a~P~~il 993 (1019)
T KOG0203|consen 915 YTAFFISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAVIFETCLACFL-CYCPGVLYALGMYPLKFQWWLVAFPFGIL 993 (1019)
T ss_pred hhheeeeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHHHHHHHH-hcCccHHHHhccCCCCcEEEEecccceee
Confidence 6889999999999988888777744 45678889999998887776655 4444 34567889999999999999999
Q ss_pred HHHHHHHHHHHHHhccccccCC
Q 003313 810 FYILLDIIKFTVRTLSREAWNQ 831 (831)
Q Consensus 810 ~~~~~e~~k~~~r~~~~~~w~~ 831 (831)
+++.+|+.|++.|.+++..|.|
T Consensus 994 IfvydE~Rk~~IR~~P~gw~e~ 1015 (1019)
T KOG0203|consen 994 IFVYDEVRKLFIRRYPGGWLEK 1015 (1019)
T ss_pred eeeHHHHHhHhhhhCCCchhhh
Confidence 9999999999999887777654
No 15
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=1.9e-104 Score=979.03 Aligned_cols=745 Identities=20% Similarity=0.239 Sum_probs=565.5
Q ss_pred CCCCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHH
Q 003313 38 RQGLSSEDAEVRLKFFGSNKLEKKPENKFLKFLSFMWNPLSWVMETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSI 117 (831)
Q Consensus 38 ~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~i~ail~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i 117 (831)
.+|||++|+++|+++||+|+++.+++++++.+++++++|++++++++++++++ . .+|+++++++++++++..+
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~~~s~~~ll~~~~~~p~~i~~i~~~~l~~~-~------~~~~~~~~i~~i~~~~~~~ 209 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIPVPSFLELLKEEVLHPFYVFQVFSVILWLL-D------EYYYYSLCIVFMSSTSISL 209 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecCCCCHHHHHHHHHhchHHHHHHHHHHHHHh-h------hhHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999999888999999999999998877777555544 2 3789999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEeCCCcCCCcEEEEc--CCCccccceEEEecCCeEEEcccccCCCcc
Q 003313 118 SFIEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIK--FGDVIPADARLLEGDPLKIDQSELTGESLT 195 (831)
Q Consensus 118 ~~~~~~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~--~G~~iPaDg~ll~g~~~~Vdes~LTGEs~p 195 (831)
..++++|+.++++++.. .++.++|+|||++++|+++||||||+|.|+ +|++|||||+|++| ++.||||+|||||.|
T Consensus 210 ~~~~~~k~~~~L~~~~~-~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g-~~~VdES~LTGES~P 287 (1054)
T TIGR01657 210 SVYQIRKQMQRLRDMVH-KPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSG-SCIVNESMLTGESVP 287 (1054)
T ss_pred HHHHHHHHHHHHHHhhc-CCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeC-cEEEecccccCCccc
Confidence 99999999998888654 577999999999999999999999999999 99999999999999 799999999999999
Q ss_pred ccccCC------------------Ceeeecceeee------------------ccchhhhHHHhhhccC-ccCcHHHHHH
Q 003313 196 VTKETG------------------DEVFSGLTCKH------------------VHSFFGKAADLVDSTE-VVGHFQQVLT 238 (831)
Q Consensus 196 v~K~~g------------------~~v~aGt~v~~------------------~~t~~g~~~~~~~~~~-~~~~l~~~~~ 238 (831)
+.|.+. +++|+||.+.+ .+|..|++.+.+...+ ..+++++...
T Consensus 288 v~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~ 367 (1054)
T TIGR01657 288 VLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSF 367 (1054)
T ss_pred eecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHH
Confidence 999752 25999999962 5788899998876654 5678888887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhchhhHhh---------------HHH-HHHHHHHHHHHhhhcCceEEccchhhhhhc
Q 003313 239 SIGNFCICFITVGMILEIIVMFPIQHRLYRD---------------RIN-MLSVTLAIASYRLSQRGAITKRMTAIEEMA 302 (831)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~l~-~l~~~l~~~~~~l~~~~ilvk~~~~le~lg 302 (831)
++..++..+.+++++..++.. ...+..+.. +++ .+++++++|+.||+|+|++||+++++|++|
T Consensus 368 ~~~~~l~~~a~i~~i~~~~~~-~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG 446 (1054)
T TIGR01657 368 KFILFLAVLALIGFIYTIIEL-IKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAG 446 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecc
Confidence 776654333322222211111 111112111 111 466788899999999999999999999999
Q ss_pred CceEEEecCCCccccCceEEEEEeeeecCCC----------CChHHHHHHHHHhccc------cCCChHHHHHHHHhCCh
Q 003313 303 RMDVLCSVKTAALTLNRLTVDRNLIEVFNRD----------MDKDILVLLAARASRL------ENQDAIDAAIINMLADP 366 (831)
Q Consensus 303 ~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~----------~~~~~~l~~a~~~~~~------~~~~~~~~ai~~~~~~~ 366 (831)
+++++|||||||||+|+|+|.+++....... .....+....+.|+.. ..+||+|.|++++.+..
T Consensus 447 ~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~ 526 (1054)
T TIGR01657 447 KIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWT 526 (1054)
T ss_pred eeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCE
Confidence 9999999999999999999999764211100 0112223333333321 23699999999986411
Q ss_pred HHH-------------------hhccceeEEecCCCCCceEEEEEEcCC-CcEEEEEccchHHHhhhccCchhhHHHHHH
Q 003313 367 KEA-------------------RANINEVHFLPFNPVDKRTAITYTDSE-GNWYRASKGAPEQILNMCQEKEEIGGKVHE 426 (831)
Q Consensus 367 ~~~-------------------~~~~~~l~~~~f~s~~k~~sv~v~~~~-g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~ 426 (831)
.+. ...+++++.+||+|++||||++++..+ +++++++|||||.|+++|.. ++.++++.+
T Consensus 527 ~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~-~~~p~~~~~ 605 (1054)
T TIGR01657 527 LEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSP-ETVPSDYQE 605 (1054)
T ss_pred EECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCC-cCCChhHHH
Confidence 000 245788999999999999999998643 56789999999999999985 346788999
Q ss_pred HHHHHHhccCeeeeeeeecCCCC--------CCCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHH
Q 003313 427 IINKLAEKGLRSLAVAVQEVPEM--------TEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAI 498 (831)
Q Consensus 427 ~~~~~~~~G~r~l~~a~~~~~~~--------~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~ 498 (831)
.+++++++|+||+++|||++++. ++++.|+||+|+|+++|+||+|++++++|++|+++||+++|+||||+.|
T Consensus 606 ~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~T 685 (1054)
T TIGR01657 606 VLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLT 685 (1054)
T ss_pred HHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 99999999999999999998632 2466899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCC-------------C--------------------------------------ccccCCcCCC--
Q 003313 499 AKETGRRLGIGTNMYP-------------S--------------------------------------SLLLGRDKDE-- 525 (831)
Q Consensus 499 a~~ia~~~gi~~~~~~-------------~--------------------------------------~~~~~~~~~~-- 525 (831)
|.++|+++||..+... . .++.|.+++.
T Consensus 686 A~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~ 765 (1054)
T TIGR01657 686 AVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQ 765 (1054)
T ss_pred HHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHH
Confidence 9999999999643210 0 0111211111
Q ss_pred -CCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCC
Q 003313 526 -NEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPG 604 (831)
Q Consensus 526 -~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~ 604 (831)
..++++.++++++.||||++|+||.++|+.+|+.|++|+|+|||+||+||||+||||||||++ |+ ..+||+++.+++
T Consensus 766 ~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-da-s~AA~f~l~~~~ 843 (1054)
T TIGR01657 766 AHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-EA-SVAAPFTSKLAS 843 (1054)
T ss_pred HhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-cc-eeecccccCCCc
Confidence 223457778888899999999999999999999999999999999999999999999999965 44 489999999999
Q ss_pred hhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHhhccc-hhccccCCCCCC---CC
Q 003313 605 LSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLLALIWEYDFPPFMVLIIAVLNDGT-IITISKGRVKSS---LR 680 (831)
Q Consensus 605 ~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~---~~ 680 (831)
|++|+++|++||+++.|+++.++|.+.+++..+...++ ....+.+++++|++|++++++.+ +++++.+++.++ .+
T Consensus 844 ~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~ 922 (1054)
T TIGR01657 844 ISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSI-LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKER 922 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCC
Confidence 99999999999999999999999999999876555443 33456899999999999999987 588888887664 23
Q ss_pred CC-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccc-CCCcHHHHHHHHHHHHHHHHHHHhhhhccCCCC
Q 003313 681 PD-GWKLNEIFAAGIVIGNYLALVTILFYWVVVHTDFFETHFHVRS-LSSNTEEISSAVHLQVSIISQALIFVTRSQSWS 758 (831)
Q Consensus 681 ~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~ 758 (831)
|. +...+..+...+.++++..++.+..|++.....|+........ .........|++| .++.++++..+.+++....
T Consensus 923 P~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f-~~~~~~~~~~~~~~~~g~p 1001 (1054)
T TIGR01657 923 PPSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVDLEKENFPNLLNTVLF-FVSSFQYLITAIVNSKGPP 1001 (1054)
T ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCCcccccCccHHHHHHH-HHHHHHHHHheEEEcCCcc
Confidence 33 2333556667777788888887777766654444321111000 0001223457777 5566677766777765532
Q ss_pred C----CcCchHHHHHHHHHHHHHHHHHHH-hhh--cccccccchhHHH
Q 003313 759 F----LERPGALLMCAFVLAQLVATLIAV-YAH--ISFAYISGIGWGW 799 (831)
Q Consensus 759 ~----~~~~~~~l~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~ 799 (831)
+ ++|+ +++.+++++.++..++.+ +.+ ...+.+.+++..|
T Consensus 1002 f~~~~~~N~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 1047 (1054)
T TIGR01657 1002 FREPIYKNK--PFVYLLITGLGLLLVLLLDPHPLLGKILQIVPLPQEF 1047 (1054)
T ss_pred hhhhHHHhH--HHHHHHHHHHHHHHHhhhCCCHHHHhhheeeeCCHHH
Confidence 2 3343 444444444333332222 322 2345555555444
No 16
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=5.5e-90 Score=853.35 Aligned_cols=759 Identities=17% Similarity=0.205 Sum_probs=539.9
Q ss_pred cCCCccCCCCCcHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003313 53 FGSNKLEKKPENKF----LKFLSFMWNPLSWVMETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFIEESNAENA 128 (831)
Q Consensus 53 ~G~N~i~~~~~~~~----~~~~~~~~~~~~~~l~i~ail~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~ 128 (831)
|.+|.+...|++.| +.+++||.++.+++|+++++++++..... ...+...+.++++++++.+.+++++++++++
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~--~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~ 78 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSP--TYRGTSIVPLAFVLIVTAIKEAIEDIRRRRR 78 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCC--CCccHhHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 67899999998775 78899999999999999999999854221 1123334445555667788889999988887
Q ss_pred HHHHhccCCCeEEEEEC-CEEEEEeCCCcCCCcEEEEcCCCccccceEEEecCC----eEEEcccccCCCccccccCC--
Q 003313 129 TAALMAHLTPKTKVLRD-GQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDP----LKIDQSELTGESLTVTKETG-- 201 (831)
Q Consensus 129 ~~~l~~~~~~~~~V~rd-g~~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~g~~----~~Vdes~LTGEs~pv~K~~g-- 201 (831)
.++. +++.++|+|+ |++++++++||+|||+|.|++||+|||||+|+++++ +.||||+|||||.|+.|.+.
T Consensus 79 d~~~---n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~ 155 (1057)
T TIGR01652 79 DKEV---NNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEE 155 (1057)
T ss_pred HHHH---hCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchh
Confidence 7654 5689999997 899999999999999999999999999999998644 99999999999999988641
Q ss_pred ----------------------------------------------Ceeeecceeee------ccchhhhHHHhhhcc--
Q 003313 202 ----------------------------------------------DEVFSGLTCKH------VHSFFGKAADLVDST-- 227 (831)
Q Consensus 202 ----------------------------------------------~~v~aGt~v~~------~~t~~g~~~~~~~~~-- 227 (831)
+.+++||.+.+ ...+.|+.+++..+.
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~~ 235 (1057)
T TIGR01652 156 TQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQ 235 (1057)
T ss_pred hhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCCC
Confidence 34677777766 455677777766554
Q ss_pred --CccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhch----hhH-------------------hhHHH----------
Q 003313 228 --EVVGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQH----RLY-------------------RDRIN---------- 272 (831)
Q Consensus 228 --~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-------------------~~~l~---------- 272 (831)
.+.+++++.++++..+++.+.++.+++..++...... ..| ...+.
T Consensus 236 ~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPisL 315 (1057)
T TIGR01652 236 APSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPISL 315 (1057)
T ss_pred CcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcceee
Confidence 2678999999999877544433322222222111110 011 01111
Q ss_pred --HHHHHHHHHH------HhhhcC----ceEEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeecCCC-------
Q 003313 273 --MLSVTLAIAS------YRLSQR----GAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRD------- 333 (831)
Q Consensus 273 --~l~~~l~~~~------~~l~~~----~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~------- 333 (831)
.+.++.++++ .+|.++ ++++|+.+++|+||++++||+|||||||+|+|+++++.++...++
T Consensus 316 ~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~~ 395 (1057)
T TIGR01652 316 YVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIK 395 (1057)
T ss_pred eehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchHH
Confidence 1223334444 567764 599999999999999999999999999999999999876321000
Q ss_pred ------C--------------------C----------------hHHHHHHHHHhccc-------c-------CCChHHH
Q 003313 334 ------M--------------------D----------------KDILVLLAARASRL-------E-------NQDAIDA 357 (831)
Q Consensus 334 ------~--------------------~----------------~~~~l~~a~~~~~~-------~-------~~~~~~~ 357 (831)
. + ..+++..++.|+.. . .++|.|.
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ 475 (1057)
T TIGR01652 396 DAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEA 475 (1057)
T ss_pred HHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHH
Confidence 0 0 01233333333211 1 2589999
Q ss_pred HHHHHhCChH------------------HHhhccceeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccC-ch
Q 003313 358 AIINMLADPK------------------EARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQE-KE 418 (831)
Q Consensus 358 ai~~~~~~~~------------------~~~~~~~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~-~~ 418 (831)
|+++++...+ .....|++++.+||+|+|||||+++++++|++++++|||||.|+++|.. .+
T Consensus 476 ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~~~ 555 (1057)
T TIGR01652 476 ALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGN 555 (1057)
T ss_pred HHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhccch
Confidence 9998763211 0224688899999999999999999988888899999999999999974 34
Q ss_pred hhHHHHHHHHHHHHhccCeeeeeeeecCCCCC-------------------------CCCCCCCceeeeeccccCCCCCC
Q 003313 419 EIGGKVHEIINKLAEKGLRSLAVAVQEVPEMT-------------------------EDSPGGPRSFCGLLPLFDPPRHD 473 (831)
Q Consensus 419 ~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~-------------------------~~~~e~~l~~lG~i~~~D~lr~~ 473 (831)
+.++.+.+++++++++|+||+++|+|.+++++ .+++|+||+|+|+++++||+|++
T Consensus 556 ~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~ 635 (1057)
T TIGR01652 556 QVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEG 635 (1057)
T ss_pred hHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhc
Confidence 55778889999999999999999999987532 13468999999999999999999
Q ss_pred hHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCc-------------------------------------
Q 003313 474 SSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSS------------------------------------- 516 (831)
Q Consensus 474 ~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~------------------------------------- 516 (831)
++++|++|+++||++||+|||+.+||.++|++||+..+.....
T Consensus 636 v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 715 (1057)
T TIGR01652 636 VPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGNV 715 (1057)
T ss_pred cHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCce
Confidence 9999999999999999999999999999999999975421100
Q ss_pred --cccCCcCCCCCc----ccHHHHHHhcC--cEEEeChHHHHHHHHHHhhc-CCEEEEEcCCccChhhhccCCeeEEec-
Q 003313 517 --LLLGRDKDENEA----LPVDELIEKAD--GFTDVFAEHKYEIVKILQEK-KHVVGMTGDGVNDAPALKKADIGIAVA- 586 (831)
Q Consensus 517 --~~~~~~~~~~~~----~~~~~~~~~~~--v~~~~~P~~K~~iv~~l~~~-g~~v~~iGDG~ND~~al~~AdvgIa~~- 586 (831)
++.|..++...+ +.+.+++..++ ||||++|+||.++|+.+|+. |++|+|+|||+||+|||++|||||++.
T Consensus 716 ~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi~g 795 (1057)
T TIGR01652 716 ALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISG 795 (1057)
T ss_pred EEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEecC
Confidence 233333221111 12344555565 99999999999999999998 999999999999999999999999884
Q ss_pred CchHHHhhhcCEEEeCCChhHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----CCCChHHHHHHHH
Q 003313 587 GATEAARGAADIVLTEPGLSVICSAV-LTSRTVFQIMKNCMIHAVSITIHIVLSFVLLALIWE----YDFPPFMVLIIAV 661 (831)
Q Consensus 587 ~~~~~a~~aadivl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~----~~~~~~~~l~~~~ 661 (831)
.....|+.+||+++.+ |+.+.+++ .+||++|+|+++++.|.++.|+..++..+++.++.+ .++.+++++|+|+
T Consensus 796 ~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~ 873 (1057)
T TIGR01652 796 KEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNV 873 (1057)
T ss_pred hHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHH
Confidence 2222578899999975 99999998 889999999999999999999987777766655432 2578889999999
Q ss_pred hhccc-hhcccc-CCCCCC----CCCC--------ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccCC
Q 003313 662 LNDGT-IITISK-GRVKSS----LRPD--------GWKLNEIFAAGIVIGNYLALVTILFYWVVVHTDFFETHFHVRSLS 727 (831)
Q Consensus 662 ~~~~~-~~~l~~-~~~~~~----~~~~--------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 727 (831)
+.+.+ +++++. +++.++ ..|+ +....+.+..+++.|++++++.+++.++.+...... ..| ..
T Consensus 874 ~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~-~~g---~~ 949 (1057)
T TIGR01652 874 FFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFV-SSG---SL 949 (1057)
T ss_pred HHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc-cCC---cc
Confidence 88875 577754 332211 1121 122234455567789999988875554444321111 112 11
Q ss_pred CcHHHHHHHHHHHHHHHHHHHh-hhhccCCCCCCcCchHHHHHHHHHHHHHHHHH-HHhhh-------cccccccchhHH
Q 003313 728 SNTEEISSAVHLQVSIISQALI-FVTRSQSWSFLERPGALLMCAFVLAQLVATLI-AVYAH-------ISFAYISGIGWG 798 (831)
Q Consensus 728 ~~~~~~~t~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~-------~~~~~~~~~~~~ 798 (831)
.+.....+..|+.+++...+.+ ..+++ |+|. .++++++++++..++ ..|.. ++.+......+.
T Consensus 950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--wt~~------~~~~~~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 1021 (1057)
T TIGR01652 950 DDFSSVGVIVFTALVVIVNLKIALEINR--WNWI------SLITIWGSILVWLIFVIVYSSIFPSPAFYKAAPRVMGTFG 1021 (1057)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHhH--hHHH------HHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHccHH
Confidence 2345566777877777766654 33343 3321 122222222221111 11111 011111112344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccccC
Q 003313 799 WAGVIWLYSLVFYILLDIIKFTVRTLSREAWN 830 (831)
Q Consensus 799 ~~~~~~~~~~~~~~~~e~~k~~~r~~~~~~w~ 830 (831)
+|+.+++..++.++++-++|.+.|+|.|+.|+
T Consensus 1022 f~l~~ll~~~~~l~p~~~~~~~~~~~~P~~~~ 1053 (1057)
T TIGR01652 1022 FWLVLLVIVLISLLPRFTYKAIQRLFRPPDYD 1053 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 56666777777888888999999988888765
No 17
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=6.2e-88 Score=778.94 Aligned_cols=520 Identities=22% Similarity=0.317 Sum_probs=418.9
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcCCC--CCCc--hhhHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhccCCC-eEE
Q 003313 71 SFMWNPLSWVMETAALMAIALANGGG--QGPD--WQDSVGIVCLLIINSSISFIE----ESNAENATAALMAHLTP-KTK 141 (831)
Q Consensus 71 ~~~~~~~~~~l~i~ail~~~~~~~~~--~~~~--~~~~~~i~~~~~~~~~i~~~~----~~~~~~~~~~l~~~~~~-~~~ 141 (831)
.+++||+.++++++++++++++.... .... +.+++.|.++++++.+++.++ |+|++++.++|+++.++ +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 46899999999999999998763210 0111 245666667777777666666 78999999999998876 675
Q ss_pred -EEECCEEEEEeCCCcCCCcEEEEcCCCccccceEEEecCCeEEEcccccCCCccccccCC---Ceeeecceeee-----
Q 003313 142 -VLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKETG---DEVFSGLTCKH----- 212 (831)
Q Consensus 142 -V~rdg~~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~g~~~~Vdes~LTGEs~pv~K~~g---~~v~aGt~v~~----- 212 (831)
|.|||++++|++++|+|||+|.|++||+|||||+|++| ...||||+|||||.|+.|++| +.||+||.+.+
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG-~~~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i 186 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKG-LATVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEV 186 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEc-ceEEecchhcCCCCceeccCCCccCeeecCceeecceEEE
Confidence 78999999999999999999999999999999999999 679999999999999999999 88999999887
Q ss_pred ------ccchhhhHHHhhhccC-ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hchh----hHhhHH---------
Q 003313 213 ------VHSFFGKAADLVDSTE-VVGHFQQVLTSIGNFCICFITVGMILEIIVMFP-IQHR----LYRDRI--------- 271 (831)
Q Consensus 213 ------~~t~~g~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~l--------- 271 (831)
.+|++||+.+++++++ +++|+|.....+.....+++++ ++.++..+. +... .+..++
T Consensus 187 ~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~ii~l~--~~~~~~~~~~~~~~~~~~~~~val~V~~IP~aL 264 (673)
T PRK14010 187 EITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTIIFLV--VILTMYPLAKFLNFNLSIAMLIALAVCLIPTTI 264 (673)
T ss_pred EEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhHHHHH--HHHHHHHHHhhccHHHHHHHHHHHHHHhhhhhH
Confidence 7999999999998875 7889987665544322211111 111111010 0000 011111
Q ss_pred H-HHHHHHHHHHHhhhcCceEEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeecCCCCChHHHHHHHHHhcccc
Q 003313 272 N-MLSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLE 350 (831)
Q Consensus 272 ~-~l~~~l~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~ 350 (831)
. .+++.++.|+.||+|+|+++|+++++|++|++|++|||||||||+|++.+.++.. ..+.+.++++..++.++..+
T Consensus 265 ~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~---~~~~~~~~ll~~a~~~~~~s 341 (673)
T PRK14010 265 GGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIP---VKSSSFERLVKAAYESSIAD 341 (673)
T ss_pred HHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEe---CCCccHHHHHHHHHHhcCCC
Confidence 1 3455567789999999999999999999999999999999999998877766432 23455667777777776555
Q ss_pred CCChHHHHHHHHhCChHHHhhccceeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccCch-hhHHHHHHHHH
Q 003313 351 NQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQEKE-EIGGKVHEIIN 429 (831)
Q Consensus 351 ~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~~~-~~~~~~~~~~~ 429 (831)
+ ||+++|++.++..... .......+++||++++|+|++.+ +|+ .+.||+++.++++|.... ..+.++.+..+
T Consensus 342 ~-~P~~~AIv~~a~~~~~-~~~~~~~~~~pF~~~~k~~gv~~---~g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~~ 414 (673)
T PRK14010 342 D-TPEGRSIVKLAYKQHI-DLPQEVGEYIPFTAETRMSGVKF---TTR--EVYKGAPNSMVKRVKEAGGHIPVDLDALVK 414 (673)
T ss_pred C-ChHHHHHHHHHHHcCC-CchhhhcceeccccccceeEEEE---CCE--EEEECCHHHHHHHhhhcCCCCchHHHHHHH
Confidence 4 9999999988642210 00111235689999999999864 343 456999999999997421 23345667778
Q ss_pred HHHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 003313 430 KLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIG 509 (831)
Q Consensus 430 ~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~ 509 (831)
+++++|+|+++++.+ ++++|+++++||+|+|++++|++||++||+++|+||||+.||.++|+++||+
T Consensus 415 ~~a~~G~~~l~v~~~-------------~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~ 481 (673)
T PRK14010 415 GVSKKGGTPLVVLED-------------NEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD 481 (673)
T ss_pred HHHhCCCeEEEEEEC-------------CEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc
Confidence 899999999998743 3899999999999999999999999999999999999999999999999995
Q ss_pred CCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCch
Q 003313 510 TNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGAT 589 (831)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~ 589 (831)
. +|+|++||||.++|+.+|++|++|+|+|||+||+|||++||||||||+|+
T Consensus 482 ~-----------------------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgsGT 532 (673)
T PRK14010 482 R-----------------------------FVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNSGT 532 (673)
T ss_pred e-----------------------------EEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeCCCC
Confidence 2 69999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcCEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003313 590 EAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLLAL 645 (831)
Q Consensus 590 ~~a~~aadivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~ 645 (831)
|+||++||+|++||||+.|++++++||++|.|+++++.|.++.|+...+..+.+.+
T Consensus 533 dvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~ 588 (673)
T PRK14010 533 MSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMF 588 (673)
T ss_pred HHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999976655544433
No 18
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=7.3e-85 Score=798.55 Aligned_cols=756 Identities=15% Similarity=0.156 Sum_probs=524.9
Q ss_pred HhcCCCccCCCCCcHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 003313 51 KFFGSNKLEKKPENKF----LKFLSFMWNPLSWVMETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFIEESNAE 126 (831)
Q Consensus 51 ~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~l~i~ail~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~ 126 (831)
.+|..|.+...|++.| +.+++||.++.+++++++++++++..... ...+...+.+++++++..+.+.+++++++
T Consensus 85 ~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~--~~~~t~~~PL~~vl~v~~ike~~Ed~~r~ 162 (1178)
T PLN03190 85 FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAV--FGRGASILPLAFVLLVTAVKDAYEDWRRH 162 (1178)
T ss_pred ccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCccc--CCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3689999999998875 67889999999999999999998854222 12344455666677777777888888887
Q ss_pred HHHHHHhccCCCeEEEEECCEEEEEeCCCcCCCcEEEEcCCCccccceEEEecC----CeEEEcccccCCCccccccCC-
Q 003313 127 NATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGD----PLKIDQSELTGESLTVTKETG- 201 (831)
Q Consensus 127 ~~~~~l~~~~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~g~----~~~Vdes~LTGEs~pv~K~~g- 201 (831)
++.++. ++..++|+|+|+++++++++|+|||+|.|++||+|||||++++++ .+.||||+|||||.|+.|.++
T Consensus 163 k~d~~~---N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~~ 239 (1178)
T PLN03190 163 RSDRIE---NNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQ 239 (1178)
T ss_pred HhHHhh---cCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecccc
Confidence 776554 467899999999999999999999999999999999999999843 489999999999999999753
Q ss_pred --------------------------------------------Ceeeecceeee------ccchhhhHHHhhhccC---
Q 003313 202 --------------------------------------------DEVFSGLTCKH------VHSFFGKAADLVDSTE--- 228 (831)
Q Consensus 202 --------------------------------------------~~v~aGt~v~~------~~t~~g~~~~~~~~~~--- 228 (831)
+.+++||.+++ ...+.|+.++.+.+..
T Consensus 240 ~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~~N~~~~~ 319 (1178)
T PLN03190 240 ETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAMLNNSGAP 319 (1178)
T ss_pred hhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHhhcCCCCC
Confidence 23444555444 5667888888776652
Q ss_pred -ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHH--hhhch-h------------------------h-----HhhHH---H
Q 003313 229 -VVGHFQQVLTSIGNFCICFITVGMILEIIVM--FPIQH-R------------------------L-----YRDRI---N 272 (831)
Q Consensus 229 -~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~------------------------~-----~~~~l---~ 272 (831)
+.+++++.++++..+++++.++.+++..++. |.... . . +...+ .
T Consensus 320 ~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~li 399 (1178)
T PLN03190 320 SKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMSVI 399 (1178)
T ss_pred CCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHHHHH
Confidence 6789999999988765444333222222211 11000 0 0 00000 0
Q ss_pred ----HHHHHHH--------HHHHhhhcC----------ceEEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeec
Q 003313 273 ----MLSVTLA--------IASYRLSQR----------GAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVF 330 (831)
Q Consensus 273 ----~l~~~l~--------~~~~~l~~~----------~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~ 330 (831)
++|++|. .-...+.++ ++.||+.+..|+||+|++||+|||||||+|+|+++++.+++.
T Consensus 400 l~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~g~ 479 (1178)
T PLN03190 400 VFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGV 479 (1178)
T ss_pred HHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEECCE
Confidence 1222211 112333332 378999999999999999999999999999999999876321
Q ss_pred CCC-----------------------------C------------C-h-----HHHHH-HHHHhccc-------------
Q 003313 331 NRD-----------------------------M------------D-K-----DILVL-LAARASRL------------- 349 (831)
Q Consensus 331 ~~~-----------------------------~------------~-~-----~~~l~-~a~~~~~~------------- 349 (831)
.++ . + + .+++. ++.|++..
T Consensus 480 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~ 559 (1178)
T PLN03190 480 DYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVK 559 (1178)
T ss_pred EcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCcccc
Confidence 000 0 0 0 11233 33333221
Q ss_pred ----cCCChHHHHHHHHhCCh----------------HHHhhccceeEEecCCCCCceEEEEEEcCCCcEEEEEccchHH
Q 003313 350 ----ENQDAIDAAIINMLADP----------------KEARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQ 409 (831)
Q Consensus 350 ----~~~~~~~~ai~~~~~~~----------------~~~~~~~~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~ 409 (831)
...+|.|.|++.++... ...+..|++++.+||+|+|||||+++++++|++++++|||||.
T Consensus 560 ~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~ 639 (1178)
T PLN03190 560 LMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTS 639 (1178)
T ss_pred ceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCcHH
Confidence 11279999999987432 1245678999999999999999999998888889999999999
Q ss_pred HhhhccCc--hhhHHHHHHHHHHHHhccCeeeeeeeecCCCCC-------------------------CCCCCCCceeee
Q 003313 410 ILNMCQEK--EEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMT-------------------------EDSPGGPRSFCG 462 (831)
Q Consensus 410 i~~~~~~~--~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~-------------------------~~~~e~~l~~lG 462 (831)
|+++|... ++.++++.+++++++++|+|||++|||.+++++ .+++|+||+++|
T Consensus 640 il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~lG 719 (1178)
T PLN03190 640 MFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTILG 719 (1178)
T ss_pred HHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEEEE
Confidence 99999742 345777889999999999999999999986431 135789999999
Q ss_pred eccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCc--------------------------
Q 003313 463 LLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSS-------------------------- 516 (831)
Q Consensus 463 ~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~-------------------------- 516 (831)
+++++|++|++++++|++|+++||++||+|||+.+||.+||++|||..+....-
T Consensus 720 ~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~~~ 799 (1178)
T PLN03190 720 ASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKLTT 799 (1178)
T ss_pred EEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhccc
Confidence 999999999999999999999999999999999999999999999965432110
Q ss_pred ---------------------cccCCcCCCCC----cccHHHHHHhcC--cEEEeChHHHHHHHHHHhhc-CCEEEEEcC
Q 003313 517 ---------------------LLLGRDKDENE----ALPVDELIEKAD--GFTDVFAEHKYEIVKILQEK-KHVVGMTGD 568 (831)
Q Consensus 517 ---------------------~~~~~~~~~~~----~~~~~~~~~~~~--v~~~~~P~~K~~iv~~l~~~-g~~v~~iGD 568 (831)
++.|..++... .+.+.+++.+++ +|||++|+||+++|+.+|+. +++|+|+||
T Consensus 800 ~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGD 879 (1178)
T PLN03190 800 VSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGD 879 (1178)
T ss_pred cccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECC
Confidence 11111111111 123455566666 69999999999999999997 589999999
Q ss_pred CccChhhhccCCeeEEe-c-CchHHHhhhcCEEEeCCChhHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003313 569 GVNDAPALKKADIGIAV-A-GATEAARGAADIVLTEPGLSVICSAV-LTSRTVFQIMKNCMIHAVSITIHIVLSFVLLAL 645 (831)
Q Consensus 569 G~ND~~al~~AdvgIa~-~-~~~~~a~~aadivl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~ 645 (831)
|+||++||++|||||++ | +|. .|..+||+.+. .|+.+.+++ .|||+.|+|+.+.+.|.+++|+..++..+++.+
T Consensus 880 GaNDv~mIq~AdVGIGIsG~EG~-qA~~aSDfaI~--~Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~~ 956 (1178)
T PLN03190 880 GANDVSMIQMADVGVGISGQEGR-QAVMASDFAMG--QFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVL 956 (1178)
T ss_pred CcchHHHHHhcCeeeeecCchhH-HHHHhhccchh--hhHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999987 3 344 56679999995 599999988 699999999999999999999998888888877
Q ss_pred hccCC----CChHHHHHHHH-hhccchhcc-ccCCCCCC----CCC--------CccchHHHHHHHHHHHHHHHHHHHHH
Q 003313 646 IWEYD----FPPFMVLIIAV-LNDGTIITI-SKGRVKSS----LRP--------DGWKLNEIFAAGIVIGNYLALVTILF 707 (831)
Q Consensus 646 ~~~~~----~~~~~~l~~~~-~~~~~~~~l-~~~~~~~~----~~~--------~~~~~~~~~~~~~~~g~~~~~~~~~~ 707 (831)
+.++. +.++.+.++|+ ++.+|.+.+ .+|+.-+. ..| .+....+.|+.+++.|++++++.|++
T Consensus 957 ~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~w~~~~i~qs~iiff~ 1036 (1178)
T PLN03190 957 FTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWLTMIDTLWQSAVVFFV 1036 (1178)
T ss_pred HHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHHHHHHHHHHHHHHHHHH
Confidence 76653 34445555554 556666776 34544332 111 11222345666777899999988865
Q ss_pred HHHHHhhhccccccccccCCCcHHHHHHHHHHHHHHHHHHH-hhhhccCCCCCCcCchHHHHHHHHHHHHHHHHHHHh--
Q 003313 708 YWVVVHTDFFETHFHVRSLSSNTEEISSAVHLQVSIISQAL-IFVTRSQSWSFLERPGALLMCAFVLAQLVATLIAVY-- 784 (831)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-- 784 (831)
.++.+.... .+. ....+.+++.+++...+. ++.+++ |+|.... .+++++++..++..++...
T Consensus 1037 ~~~~~~~~~----~~~-------~~~~~~~~~~~v~~vnl~i~~~~~~--wt~~~~~--~i~~Si~~~~i~~~~~~~~~~ 1101 (1178)
T PLN03190 1037 PLFAYWAST----IDG-------SSIGDLWTLAVVILVNLHLAMDIIR--WNWITHA--AIWGSIVATFICVIVIDAIPT 1101 (1178)
T ss_pred HHHHhcCCC----cCc-------eeEhHhhhhHHHHHHHHHHHHHHhh--hhHHHHH--HHHHHHHHHHHHHHHHHhccc
Confidence 554442211 110 111234444444444443 333444 3322211 1112222111111111100
Q ss_pred -hh-cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccC
Q 003313 785 -AH-ISFAYISGIGWGWAGVIWLYSLVFYILLDIIKFTVRTLSREAWN 830 (831)
Q Consensus 785 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~k~~~r~~~~~~w~ 830 (831)
.. +.++.+ ...+.+|+.+++..++.++++-++|.+.|.+.|+.++
T Consensus 1102 ~~~~~~~~~~-~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P~~~~ 1148 (1178)
T PLN03190 1102 LPGYWAIFHI-AKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTPCDVQ 1148 (1178)
T ss_pred chhHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 00 111111 1134466666777778888888999999977776553
No 19
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=2.9e-85 Score=757.45 Aligned_cols=512 Identities=21% Similarity=0.279 Sum_probs=420.9
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcCC-------CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-eEEE
Q 003313 71 SFMWNPLSWVMETAALMAIALANGG-------GQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTP-KTKV 142 (831)
Q Consensus 71 ~~~~~~~~~~l~i~ail~~~~~~~~-------~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~-~~~V 142 (831)
.+|+||+.++++++++++++++... .....|..++.+++.++++..++.++|+|+++.+++|+++.+. +++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 5799999999999999999876311 1113455556666667778888889999999999999998875 7999
Q ss_pred EECCE-EEEEeCCCcCCCcEEEEcCCCccccceEEEecCCeEEEcccccCCCccccccCCCe---eeecceeee------
Q 003313 143 LRDGQ-WKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKETGDE---VFSGLTCKH------ 212 (831)
Q Consensus 143 ~rdg~-~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~g~~~~Vdes~LTGEs~pv~K~~g~~---v~aGt~v~~------ 212 (831)
+|||+ +++|++++|+|||+|.+++||+|||||+|++| .+.||||+|||||.|+.|++|+. ||+||.+.+
T Consensus 109 ir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG-~a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i~ 187 (679)
T PRK01122 109 LREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIR 187 (679)
T ss_pred EECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEc-cEEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEEE
Confidence 99988 89999999999999999999999999999999 68999999999999999999988 999999987
Q ss_pred -----ccchhhhHHHhhhccC-ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-hhhHhhHHH------------H
Q 003313 213 -----VHSFFGKAADLVDSTE-VVGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQ-HRLYRDRIN------------M 273 (831)
Q Consensus 213 -----~~t~~g~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~------------~ 273 (831)
.+|.+|++.+++++++ +++|+|...+.+...+..++++.++..+++.+... ...+...+. .
T Consensus 188 Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~~~g~~~~l~~~iallV~aiP~alg~l 267 (679)
T PRK01122 188 ITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAAYSGGALSITVLVALLVCLIPTTIGGL 267 (679)
T ss_pred EEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHcccchhhhH
Confidence 7999999999998874 78999987777655433222221111111111110 111111111 2
Q ss_pred HHHHHHHHHHhhhcCceEEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeecCCCCChHHHHHHHHHhccccCCC
Q 003313 274 LSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQD 353 (831)
Q Consensus 274 l~~~l~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~ 353 (831)
+++....|+.||+|+|+++|++.++|++|++|++|||||||||+|+|++.++.. ..+.+.++++..++.++..++ |
T Consensus 268 ~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~a~~~s~~s~-h 343 (679)
T PRK01122 268 LSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLP---VPGVTEEELADAAQLSSLADE-T 343 (679)
T ss_pred HHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEe---CCCCCHHHHHHHHHHhcCCCC-C
Confidence 333445689999999999999999999999999999999999999999998753 234667778888887776665 8
Q ss_pred hHHHHHHHHhCCh---HHHhhccceeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccCc-hhhHHHHHHHHH
Q 003313 354 AIDAAIINMLADP---KEARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQEK-EEIGGKVHEIIN 429 (831)
Q Consensus 354 ~~~~ai~~~~~~~---~~~~~~~~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~~-~~~~~~~~~~~~ 429 (831)
|.++|+++++... ......++..+.+||++.++++++.+ +| ..++||++|.+++.|... .+.++++++..+
T Consensus 344 P~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~---~g--~~~~kGa~e~il~~~~~~g~~~~~~~~~~~~ 418 (679)
T PRK01122 344 PEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDL---DG--REIRKGAVDAIRRYVESNGGHFPAELDAAVD 418 (679)
T ss_pred chHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEE---CC--EEEEECCHHHHHHHHHhcCCcChHHHHHHHH
Confidence 9999999886431 11112245677899999988887653 34 578999999999999642 234567788888
Q ss_pred HHHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 003313 430 KLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIG 509 (831)
Q Consensus 430 ~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~ 509 (831)
+++++|.|++++|++. +++|+++++||+|||++++|++||++||+++|+||||+.||.++|+++||+
T Consensus 419 ~~a~~G~~~l~va~~~-------------~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId 485 (679)
T PRK01122 419 EVARKGGTPLVVAEDN-------------RVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD 485 (679)
T ss_pred HHHhCCCcEEEEEECC-------------eEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc
Confidence 9999999999999754 899999999999999999999999999999999999999999999999995
Q ss_pred CCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCch
Q 003313 510 TNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGAT 589 (831)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~ 589 (831)
. +++|++||||.++|+.+|++|+.|+|+|||+||+|||++||||||||+|+
T Consensus 486 ~-----------------------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgsGT 536 (679)
T PRK01122 486 D-----------------------------FLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGT 536 (679)
T ss_pred E-----------------------------EEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeCCCC
Confidence 2 69999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcCEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 003313 590 EAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITI 634 (831)
Q Consensus 590 ~~a~~aadivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni 634 (831)
|+||++||+|++||||++|++++++||++.-.--....|.+..-+
T Consensus 537 dvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~ 581 (679)
T PRK01122 537 QAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDV 581 (679)
T ss_pred HHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHH
Confidence 999999999999999999999999999998555555667766444
No 20
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-85 Score=737.18 Aligned_cols=676 Identities=21% Similarity=0.298 Sum_probs=499.8
Q ss_pred HHHHHhCCCCCCCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHH
Q 003313 29 EVFGQLGTTRQGLSSEDAEVRLKFFGSNKLEKKPENKFLKFLSFMWNPLSWVMETAALMAIALANGGGQGPDWQDSVGIV 108 (831)
Q Consensus 29 ~~~~~l~~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~i~ail~~~~~~~~~~~~~~~~~~~i~ 108 (831)
+.+........||+.+++.+|+..||+|.+..+.++.+..++++..+||+.+. +.++..|... .+++++..|+
T Consensus 149 ~~~~~~~~~~~gL~~~~~~~r~~iyG~N~i~l~ik~i~~iLv~EvL~PfYlFQ-~fSv~lW~~d------~Y~~YA~cI~ 221 (1140)
T KOG0208|consen 149 RWYSTESYVSNGLERQEIIDRRIIYGRNVISLPIKSISQILVKEVLNPFYLFQ-AFSVALWLAD------SYYYYAFCIV 221 (1140)
T ss_pred hhhccceeccCCccHHHHHhHHhhcCCceeeeecccHHHHHHHhccchHHHHH-hHHhhhhhcc------cchhhhhHHH
Confidence 34444444578999999999999999999999999999999999999995544 4444444432 3566677778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEeCCCcCCCcEEEEcC-CCccccceEEEecCCeEEEcc
Q 003313 109 CLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKF-GDVIPADARLLEGDPLKIDQS 187 (831)
Q Consensus 109 ~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~~-G~~iPaDg~ll~g~~~~Vdes 187 (831)
++.+.+...+.++.++..+.++++-+ ....|+|+|||.|++|+++|||||||+.+.+ |-..|||+++++| +|.||||
T Consensus 222 iisv~Si~~sv~e~r~qs~rlr~mv~-~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g-~civNEs 299 (1140)
T KOG0208|consen 222 IISVYSIVLSVYETRKQSIRLRSMVK-FTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISG-DCIVNES 299 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeC-cEEeecc
Confidence 88888888899999999888877654 4578999999999999999999999999998 9999999999999 7999999
Q ss_pred cccCCCccccccCC-------------------Ceeeecceeee-----------------ccchhhhHHHhhhccC-cc
Q 003313 188 ELTGESLTVTKETG-------------------DEVFSGLTCKH-----------------VHSFFGKAADLVDSTE-VV 230 (831)
Q Consensus 188 ~LTGEs~pv~K~~g-------------------~~v~aGt~v~~-----------------~~t~~g~~~~~~~~~~-~~ 230 (831)
+|||||.|+.|.+- +.+|.||.+.+ -+|.-|++.+.+...+ ..
T Consensus 300 mLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~ 379 (1140)
T KOG0208|consen 300 MLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPVN 379 (1140)
T ss_pred cccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCcc
Confidence 99999999999863 47999999987 2344455555444333 11
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhHhh----HHH------------HHHHHHHHHHHhhhcCceEEcc
Q 003313 231 GHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRD----RIN------------MLSVTLAIASYRLSQRGAITKR 294 (831)
Q Consensus 231 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~------------~l~~~l~~~~~~l~~~~ilvk~ 294 (831)
.++-+-.-++...+.++..++++...+. +...+.+... ++. .+++...++..||.|+||.|-+
T Consensus 380 fkfyrds~~fi~~l~~ia~~gfiy~~i~-l~~~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCis 458 (1140)
T KOG0208|consen 380 FKFYRDSFKFILFLVIIALIGFIYTAIV-LNLLGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCIS 458 (1140)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhHh-HHHcCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcC
Confidence 2222222222222222222222221111 1112222221 111 4555666788999999999999
Q ss_pred chhhhhhcCceEEEecCCCccccCceEEEEEeeeecC---C---------------------CCCh--HHHHHHHHHhcc
Q 003313 295 MTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFN---R---------------------DMDK--DILVLLAARASR 348 (831)
Q Consensus 295 ~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~---~---------------------~~~~--~~~l~~a~~~~~ 348 (831)
++.+...|+++++|||||||||++.+.+..+.....+ . ...+ ......|.|++-
T Consensus 459 P~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL 538 (1140)
T KOG0208|consen 459 PQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSL 538 (1140)
T ss_pred ccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhcee
Confidence 9999999999999999999999999999887641100 0 0001 122333334321
Q ss_pred c-----cCCChHHHHHHHHhC------------------------ChHH--------H-hhccceeEEecCCCCCceEEE
Q 003313 349 L-----ENQDAIDAAIINMLA------------------------DPKE--------A-RANINEVHFLPFNPVDKRTAI 390 (831)
Q Consensus 349 ~-----~~~~~~~~ai~~~~~------------------------~~~~--------~-~~~~~~l~~~~f~s~~k~~sv 390 (831)
. -.+||+|..+.+..+ +|.+ . ...+.+++.+||+|.-+||||
T Consensus 539 ~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSV 618 (1140)
T KOG0208|consen 539 TLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSV 618 (1140)
T ss_pred EEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEE
Confidence 1 135788776654321 0100 0 114678899999999999999
Q ss_pred EEEcC-CCcEEEEEccchHHHhhhccCchhhHHHHHHHHHHHHhccCeeeeeeeecCCCC--------CCCCCCCCceee
Q 003313 391 TYTDS-EGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEM--------TEDSPGGPRSFC 461 (831)
Q Consensus 391 ~v~~~-~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~--------~~~~~e~~l~~l 461 (831)
++.++ +.+.++|+|||||.|.+.|+. +.++.++++.++.|+.+|+|++|+|+|.++.. .|+.+|+||+|+
T Consensus 619 Iv~~~~e~~~~~ftKGaPE~I~~ic~p-~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~Fl 697 (1140)
T KOG0208|consen 619 IVSTGGEDKMMVFTKGAPESIAEICKP-ETVPADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEFL 697 (1140)
T ss_pred EEecCCCCceEeeccCCHHHHHHhcCc-ccCCccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhccceee
Confidence 99864 467789999999999999986 57899999999999999999999999999765 478899999999
Q ss_pred eeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCC-------------------------c
Q 003313 462 GLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPS-------------------------S 516 (831)
Q Consensus 462 G~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~-------------------------~ 516 (831)
|++.||+++|++++.+|++|.+++|+++|+||||..||..+||+||+..+.... +
T Consensus 698 GLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~ 777 (1140)
T KOG0208|consen 698 GLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQ 777 (1140)
T ss_pred EEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccc
Confidence 999999999999999999999999999999999999999999999996532100 0
Q ss_pred cccCCcCCC-------------------------------CCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEE
Q 003313 517 LLLGRDKDE-------------------------------NEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGM 565 (831)
Q Consensus 517 ~~~~~~~~~-------------------------------~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~ 565 (831)
.....+.+. ...+.++.++.+..|||||+|+||.++|+.+|+.|+.|+|
T Consensus 778 ~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~Vgf 857 (1140)
T KOG0208|consen 778 FLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGF 857 (1140)
T ss_pred cCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEe
Confidence 000000000 0123466777788999999999999999999999999999
Q ss_pred EcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003313 566 TGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLLAL 645 (831)
Q Consensus 566 iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~ 645 (831)
||||+|||.|||+|||||+++.+. |.-||.++-.-.+.+.++..|++||+..-.--..++|...|.+..+...+. .+
T Consensus 858 CGDGANDCgALKaAdvGISLSeaE--ASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~~-LY 934 (1140)
T KOG0208|consen 858 CGDGANDCGALKAADVGISLSEAE--ASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVVF-LY 934 (1140)
T ss_pred cCCCcchhhhhhhcccCcchhhhh--HhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhhe-ee
Confidence 999999999999999999998654 566899998888999999999999999999999999999888866544332 23
Q ss_pred hccCCCChHHHHHHHHhhccc-hhccccCC----CCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 003313 646 IWEYDFPPFMVLIIAVLNDGT-IITISKGR----VKSSLRPDGWKLNEIFAAGIVIGNYLALVTILFYWVVVHTDFFE 718 (831)
Q Consensus 646 ~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 718 (831)
..+..++.+|.+++.++...+ +..++..+ ..+.+.|.++..++++.-.+.+-++..++-+..+++.....|+.
T Consensus 935 ~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP~~~L~s~~~~~~l~~q~vli~l~q~i~~l~~~~qpw~~ 1012 (1140)
T KOG0208|consen 935 LINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRPPTNLLSKKILVPLLLQIVLICLVQWILTLIVEPQPWYE 1012 (1140)
T ss_pred eecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCCCccccccchhhhhHHHHHHHHHHHHhhheeecccccee
Confidence 456789999999999887655 44444433 22334444454555555555544445555555555554445544
No 21
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=2.2e-81 Score=723.34 Aligned_cols=514 Identities=21% Similarity=0.272 Sum_probs=421.4
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcC---CC---CCCchhhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-eE
Q 003313 71 SFMWNPLSWVMETAALMAIALANG---GG---QGPDWQDS---VGIVCLLIINSSISFIEESNAENATAALMAHLTP-KT 140 (831)
Q Consensus 71 ~~~~~~~~~~l~i~ail~~~~~~~---~~---~~~~~~~~---~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~-~~ 140 (831)
.||.||+.++++++++++++++.. .+ ....|+++ +.+++.++++..++.++|+|+++++++|++..++ .+
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 579999999999999999997531 11 11236664 3344556778888899999999999999998876 48
Q ss_pred EEEE-CCEEEEEeCCCcCCCcEEEEcCCCccccceEEEecCCeEEEcccccCCCccccccCCCe---eeecceeee----
Q 003313 141 KVLR-DGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKETGDE---VFSGLTCKH---- 212 (831)
Q Consensus 141 ~V~r-dg~~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~g~~~~Vdes~LTGEs~pv~K~~g~~---v~aGt~v~~---- 212 (831)
+|+| ||++++|++++|+|||+|.+++||+|||||+|++| .+.||||+|||||.|+.|++|+. ||+||.+.+
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG-~~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~ 186 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEG-VASVDESAITGESAPVIKESGGDFASVTGGTRILSDWLV 186 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEc-cEEEEcccccCCCCceeecCCCCcceeecCcEEEeeEEE
Confidence 8885 89999999999999999999999999999999999 79999999999999999999974 999999887
Q ss_pred -------ccchhhhHHHhhhccC-ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhh--HhhHHH----------
Q 003313 213 -------VHSFFGKAADLVDSTE-VVGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRL--YRDRIN---------- 272 (831)
Q Consensus 213 -------~~t~~g~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~---------- 272 (831)
.+|++|++.+++++++ +++|+|...+.+..++.+++++..+..+.+. .+.... +...+.
T Consensus 187 i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~~~~~~-~~~~~~~~~~~lvallV~aiP~aL 265 (675)
T TIGR01497 187 VECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTATLWPFA-AYGGNAISVTVLVALLVCLIPTTI 265 (675)
T ss_pred EEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcChhHHHHHHHHHHHHhCchhh
Confidence 7999999999998875 6899998877766553322222111111111 011111 111111
Q ss_pred --HHHHHHHHHHHhhhcCceEEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeecCCCCChHHHHHHHHHhcccc
Q 003313 273 --MLSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLE 350 (831)
Q Consensus 273 --~l~~~l~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~ 350 (831)
..+.....|+.||+|+|+++|++.++|++|++|++|||||||||+|+|++.++.. ..+.+.++++..++.++..+
T Consensus 266 g~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~aa~~~~~s 342 (675)
T TIGR01497 266 GGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIP---AQGVDEKTLADAAQLASLAD 342 (675)
T ss_pred hhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEe---cCCCcHHHHHHHHHHhcCCC
Confidence 1122224588999999999999999999999999999999999999999998763 23556778888888877665
Q ss_pred CCChHHHHHHHHhCChHH--HhhccceeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccCc-hhhHHHHHHH
Q 003313 351 NQDAIDAAIINMLADPKE--ARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQEK-EEIGGKVHEI 427 (831)
Q Consensus 351 ~~~~~~~ai~~~~~~~~~--~~~~~~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~~-~~~~~~~~~~ 427 (831)
+ ||.++|++.++..... ....++..+..||++.++++++.+. +| ..++||++|.+++.|... ...+.++++.
T Consensus 343 ~-hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~~~ 417 (675)
T TIGR01497 343 D-TPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDLDQA 417 (675)
T ss_pred C-CcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHHHHH
Confidence 4 9999999987643211 1112345678999999877765433 45 568999999999888532 2345667888
Q ss_pred HHHHHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhC
Q 003313 428 INKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLG 507 (831)
Q Consensus 428 ~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~g 507 (831)
+++++++|.|++++|++. +++|+++++||+|||++++|++||++|++++|+|||+..+|.++|+++|
T Consensus 418 ~~~~a~~G~r~l~va~~~-------------~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lG 484 (675)
T TIGR01497 418 VDQVARQGGTPLVVCEDN-------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAG 484 (675)
T ss_pred HHHHHhCCCeEEEEEECC-------------EEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcC
Confidence 889999999999999864 8999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecC
Q 003313 508 IGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAG 587 (831)
Q Consensus 508 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~ 587 (831)
++. ++++++|+||.++|+.+|++|+.|+|+|||.||+|||++|||||||++
T Consensus 485 I~~-----------------------------v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~~ 535 (675)
T TIGR01497 485 VDD-----------------------------FIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMNS 535 (675)
T ss_pred CCE-----------------------------EEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeCC
Confidence 952 699999999999999999999999999999999999999999999999
Q ss_pred chHHHhhhcCEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 003313 588 ATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHI 636 (831)
Q Consensus 588 ~~~~a~~aadivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~ 636 (831)
|+++++++||++++||||++|++++++||+++-+......|.++..+.-
T Consensus 536 gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~ 584 (675)
T TIGR01497 536 GTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAK 584 (675)
T ss_pred CCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHH
Confidence 9999999999999999999999999999999999999999988877753
No 22
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.8e-80 Score=712.50 Aligned_cols=480 Identities=26% Similarity=0.373 Sum_probs=405.6
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEE-CCEEEEEeCCCcCCCcEEEEcCCCccccceEEEe
Q 003313 100 DWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLR-DGQWKEQDAAVLVPGDIISIKFGDVIPADARLLE 178 (831)
Q Consensus 100 ~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~r-dg~~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~ 178 (831)
+|.+++++++++.++..++.+...|+++++++|.++.|.++++++ ||++++|+.++|++||+|.|+|||+||+||+|++
T Consensus 173 yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~ 252 (713)
T COG2217 173 YFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVS 252 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEe
Confidence 447788889999999999999999999999999999999997776 5668999999999999999999999999999999
Q ss_pred cCCeEEEcccccCCCccccccCCCeeeecceeee-----------ccchhhhHHHhhhccC-ccCcHHHHHHHHHHHHHH
Q 003313 179 GDPLKIDQSELTGESLTVTKETGDEVFSGLTCKH-----------VHSFFGKAADLVDSTE-VVGHFQQVLTSIGNFCIC 246 (831)
Q Consensus 179 g~~~~Vdes~LTGEs~pv~K~~g~~v~aGt~v~~-----------~~t~~g~~~~~~~~~~-~~~~l~~~~~~~~~~~~~ 246 (831)
| ...||||+|||||.|+.|.+||.|++||.+.+ .+|.++++.+++++++ .++|.|+.+|+++.++..
T Consensus 253 G-~s~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp 331 (713)
T COG2217 253 G-SSSVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVP 331 (713)
T ss_pred C-cEEeecchhhCCCCCEecCCCCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHH
Confidence 9 67899999999999999999999999999887 7899999999999885 899999999999998766
Q ss_pred HHHHHHHHHHHHHhhhchhhHh----hHHH------------HHHHHHHHHHHhhhcCceEEccchhhhhhcCceEEEec
Q 003313 247 FITVGMILEIIVMFPIQHRLYR----DRIN------------MLSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSV 310 (831)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~----~~l~------------~l~~~l~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~D 310 (831)
.+++..++.+++++......|. .++. ..|+++..++.+++|+|+++|+.+++|.++++|+++||
T Consensus 332 ~vl~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFD 411 (713)
T COG2217 332 VVLVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFD 411 (713)
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEe
Confidence 4444344433333332222333 3332 34566777899999999999999999999999999999
Q ss_pred CCCccccCceEEEEEeeeecCCCCChHHHHHHHHHhccccCCChHHHHHHHHhCChHHHhhccceeEEecCCCCCceEEE
Q 003313 311 KTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAI 390 (831)
Q Consensus 311 KTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sv 390 (831)
||||||+|+|+|+++.. . .+ ++++++.+++..+..++ ||+++|+++++.... ....+..+.+|- +....
T Consensus 412 KTGTLT~G~p~v~~v~~--~-~~-~e~~~L~laAalE~~S~-HPiA~AIv~~a~~~~--~~~~~~~~~i~G----~Gv~~ 480 (713)
T COG2217 412 KTGTLTEGKPEVTDVVA--L-DG-DEDELLALAAALEQHSE-HPLAKAIVKAAAERG--LPDVEDFEEIPG----RGVEA 480 (713)
T ss_pred CCCCCcCCceEEEEEec--C-CC-CHHHHHHHHHHHHhcCC-ChHHHHHHHHHHhcC--CCCccceeeecc----CcEEE
Confidence 99999999999999773 2 23 78899999999888877 999999999765322 111222333331 11111
Q ss_pred EEEcCCCcEEEEEccchHHHhhhccCchhhHHHHHHHHHHHHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccccCCC
Q 003313 391 TYTDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPP 470 (831)
Q Consensus 391 ~v~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~l 470 (831)
. .+| ..+..|+++.+.+.-. +... ..+..+.+.++|..++.++.++ +++|+++++|++
T Consensus 481 ~---v~g--~~v~vG~~~~~~~~~~---~~~~-~~~~~~~~~~~G~t~v~va~dg-------------~~~g~i~~~D~~ 538 (713)
T COG2217 481 E---VDG--ERVLVGNARLLGEEGI---DLPL-LSERIEALESEGKTVVFVAVDG-------------KLVGVIALADEL 538 (713)
T ss_pred E---ECC--EEEEEcCHHHHhhcCC---Cccc-hhhhHHHHHhcCCeEEEEEECC-------------EEEEEEEEeCCC
Confidence 1 255 5667899998754211 1111 4556678888999999999987 899999999999
Q ss_pred CCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHH
Q 003313 471 RHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKY 550 (831)
Q Consensus 471 r~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~ 550 (831)
|++++++|++||+.|++++|+||||..+|.++|+++||+. +++++.||||.
T Consensus 539 R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~-----------------------------v~AellPedK~ 589 (713)
T COG2217 539 RPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE-----------------------------VRAELLPEDKA 589 (713)
T ss_pred ChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh-----------------------------heccCCcHHHH
Confidence 9999999999999999999999999999999999999953 79999999999
Q ss_pred HHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHH
Q 003313 551 EIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAV 630 (831)
Q Consensus 551 ~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l 630 (831)
++|+.+|++|++|+|+|||+||+|||++||||||||+|+|+|+++||+++++|++..++++++.+|+++++||+|+.|++
T Consensus 590 ~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~ 669 (713)
T COG2217 590 EIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAF 669 (713)
T ss_pred HHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 003313 631 SITIHIVLSFVL 642 (831)
Q Consensus 631 ~~ni~~~~~~~~ 642 (831)
.||...++...+
T Consensus 670 ~yn~~~iplA~~ 681 (713)
T COG2217 670 GYNAIAIPLAAG 681 (713)
T ss_pred HHHHHHHHHHHH
Confidence 999876555443
No 23
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.2e-76 Score=662.20 Aligned_cols=515 Identities=23% Similarity=0.317 Sum_probs=423.4
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCE-EEEEeCCCcCCCcEEEEcCCCccccceEE
Q 003313 98 GPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQ-WKEQDAAVLVPGDIISIKFGDVIPADARL 176 (831)
Q Consensus 98 ~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg~-~~~i~~~~lv~GDiI~l~~G~~iPaDg~l 176 (831)
...|.++.+++.++.++..++.....|+..++.+|.++.|.++.++.+|+ +++|+.+.|++||+|.|.||++||+||+|
T Consensus 338 ~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~V 417 (951)
T KOG0207|consen 338 PTFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVV 417 (951)
T ss_pred chhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEE
Confidence 34455677777888889999999999999999999999999999999996 89999999999999999999999999999
Q ss_pred EecCCeEEEcccccCCCccccccCCCeeeecceeee-----------ccchhhhHHHhhhccC-ccCcHHHHHHHHHHHH
Q 003313 177 LEGDPLKIDQSELTGESLTVTKETGDEVFSGLTCKH-----------VHSFFGKAADLVDSTE-VVGHFQQVLTSIGNFC 244 (831)
Q Consensus 177 l~g~~~~Vdes~LTGEs~pv~K~~g~~v~aGt~v~~-----------~~t~~g~~~~~~~~~~-~~~~l~~~~~~~~~~~ 244 (831)
++| +++||||++|||++||.|++|+.|.+||.+.+ .++.+++|.+++++++ .++|+|+.+|+++.++
T Consensus 418 v~G-ss~VDEs~iTGEs~PV~Kk~gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yF 496 (951)
T KOG0207|consen 418 VDG-SSEVDESLITGESMPVPKKKGSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYF 496 (951)
T ss_pred EeC-ceeechhhccCCceecccCCCCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcC
Confidence 999 68999999999999999999999999998877 7889999999999986 8899999999999986
Q ss_pred HHHHHHHHHHHHHHHhhhch----------hhHhhHHH----H------------HHHHHHHHHHhhhcCceEEccchhh
Q 003313 245 ICFITVGMILEIIVMFPIQH----------RLYRDRIN----M------------LSVTLAIASYRLSQRGAITKRMTAI 298 (831)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~----------~~~~~~l~----~------------l~~~l~~~~~~l~~~~ilvk~~~~l 298 (831)
..++++..++.++++..+.. ..+..++. + .|++...|....+++|+++|..+++
T Consensus 497 vP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~L 576 (951)
T KOG0207|consen 497 VPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEAL 576 (951)
T ss_pred CchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHH
Confidence 55544444443333332211 11111111 1 1122234567889999999999999
Q ss_pred hhhcCceEEEecCCCccccCceEEEEEeeeecCCCCChHHHHHHHHHhccccCCChHHHHHHHHhCChHHHhhccceeEE
Q 003313 299 EEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHF 378 (831)
Q Consensus 299 e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~ 378 (831)
|.+.++++++||||||||+|++.|.++.. ..+..+..+++.+++..+..+. ||+.+|+++++.........-....+
T Consensus 577 E~~hkv~tVvFDKTGTLT~G~~~V~~~~~--~~~~~~~~e~l~~v~a~Es~Se-HPig~AIv~yak~~~~~~~~~~~~~~ 653 (951)
T KOG0207|consen 577 EKAHKVKTVVFDKTGTLTEGKPTVVDFKS--LSNPISLKEALALVAAMESGSE-HPIGKAIVDYAKEKLVEPNPEGVLSF 653 (951)
T ss_pred HHHhcCCEEEEcCCCceecceEEEEEEEe--cCCcccHHHHHHHHHHHhcCCc-CchHHHHHHHHHhcccccCcccccee
Confidence 99999999999999999999999998774 3333677788887777766665 99999999998643311111112222
Q ss_pred ecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccCchhhHHHHHHHHHHHHhccCeeeeeeeecCCCCCCCCCCCCc
Q 003313 379 LPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPR 458 (831)
Q Consensus 379 ~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l 458 (831)
-.|..+.....+. .+|+. ++.|+.+.+... ....++.+++.+++...+|..+.+++..+
T Consensus 654 ~~~pg~g~~~~~~---~~~~~--i~iGN~~~~~r~---~~~~~~~i~~~~~~~e~~g~tvv~v~vn~------------- 712 (951)
T KOG0207|consen 654 EYFPGEGIYVTVT---VDGNE--VLIGNKEWMSRN---GCSIPDDILDALTESERKGQTVVYVAVNG------------- 712 (951)
T ss_pred ecccCCCcccceE---EeeeE--EeechHHHHHhc---CCCCchhHHHhhhhHhhcCceEEEEEECC-------------
Confidence 2233333221221 13433 778999887642 22345567788888889999999999988
Q ss_pred eeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhc
Q 003313 459 SFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKA 538 (831)
Q Consensus 459 ~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (831)
+++|++.++|++|+|+..+|+.||+.|++++|+||||..+|+++|+++|++
T Consensus 713 ~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~----------------------------- 763 (951)
T KOG0207|consen 713 QLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID----------------------------- 763 (951)
T ss_pred EEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc-----------------------------
Confidence 999999999999999999999999999999999999999999999999975
Q ss_pred CcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHHHhHHH
Q 003313 539 DGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTV 618 (831)
Q Consensus 539 ~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~~gR~~ 618 (831)
+|+|++.|+||.++|+.+|++++.|+|+|||+||+|||.+|||||+||.|+++|.++||+|+++||+..++.+++.+|++
T Consensus 764 ~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt 843 (951)
T KOG0207|consen 764 NVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAIDLSRKT 843 (951)
T ss_pred eEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHHHHHHHH
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHhhccc
Q 003313 619 FQIMKNCMIHAVSITIHIVLSFVLLALIWEYDFPPFMVLIIAVLNDGT 666 (831)
Q Consensus 619 ~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 666 (831)
.+|+|.|+.|++.||+..++...+.++.+++.++|+.--....++...
T Consensus 844 ~~rIk~N~~~A~~yn~~~IpIAagvF~P~~~~L~Pw~A~lama~SSvs 891 (951)
T KOG0207|consen 844 VKRIKLNFVWALIYNLVGIPIAAGVFAPFGIVLPPWMASLAMAASSVS 891 (951)
T ss_pred HhhHHHHHHHHHHHHHhhhhhheecccCCccccCchHHHHHHHhhhHH
Confidence 999999999999999988888888877777778887665555555443
No 24
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=2.9e-74 Score=685.62 Aligned_cols=473 Identities=25% Similarity=0.331 Sum_probs=399.8
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEeCCCcCCCcEEEEcCCCccccceEEEec
Q 003313 100 DWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEG 179 (831)
Q Consensus 100 ~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~g 179 (831)
.|.++++++++++++..++.++++|+++.+++|+++.|++++|+|||++++|++++|+|||+|.|++||+|||||+|++|
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g 284 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSP 284 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEEC
Confidence 67888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEcccccCCCccccccCCCeeeecceeee-----------ccchhhhHHHhhhccC-ccCcHHHHHHHHHHHHHHH
Q 003313 180 DPLKIDQSELTGESLTVTKETGDEVFSGLTCKH-----------VHSFFGKAADLVDSTE-VVGHFQQVLTSIGNFCICF 247 (831)
Q Consensus 180 ~~~~Vdes~LTGEs~pv~K~~g~~v~aGt~v~~-----------~~t~~g~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~ 247 (831)
+..||||+|||||.|+.|.+||.||+||.+.+ .+|.+|++.+++++++ .++|+|+.++++++++..+
T Consensus 285 -~~~vdes~lTGEs~Pv~k~~Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~ 363 (741)
T PRK11033 285 -FASFDESALTGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPA 363 (741)
T ss_pred -cEEeecccccCCCCCEecCCCCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999876 7889999999998875 7899999999999986655
Q ss_pred HHHHHHHHHHHHhhhchhhHh----hHHH------------HHHHHHHHHHHhhhcCceEEccchhhhhhcCceEEEecC
Q 003313 248 ITVGMILEIIVMFPIQHRLYR----DRIN------------MLSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVK 311 (831)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~----~~l~------------~l~~~l~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DK 311 (831)
+++..++.+++++.+....|. .++. ..++++..++.+++|+|+++|+++++|++++++++||||
T Consensus 364 v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDK 443 (741)
T PRK11033 364 IMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDK 443 (741)
T ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeC
Confidence 544344333333222222222 2222 124556678889999999999999999999999999999
Q ss_pred CCccccCceEEEEEeeeecCCCCChHHHHHHHHHhccccCCChHHHHHHHHhCChHHHhhccceeEEecCCCCCceEEEE
Q 003313 312 TAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAIT 391 (831)
Q Consensus 312 TGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sv~ 391 (831)
|||||+|+|+|.++.. ..+.++++++.+++..+..+ .||+++|+++++... +. .+||.++.+.+.-.
T Consensus 444 TGTLT~g~~~v~~~~~---~~~~~~~~~l~~aa~~e~~s-~hPia~Ai~~~a~~~-----~~----~~~~~~~~~~~~g~ 510 (741)
T PRK11033 444 TGTLTEGKPQVTDIHP---ATGISESELLALAAAVEQGS-THPLAQAIVREAQVR-----GL----AIPEAESQRALAGS 510 (741)
T ss_pred CCCCcCCceEEEEEEe---cCCCCHHHHHHHHHHHhcCC-CCHHHHHHHHHHHhc-----CC----CCCCCcceEEEeeE
Confidence 9999999999998763 23467778888887766554 499999999886421 11 24666666655321
Q ss_pred -EE-cCCCcEEEEEccchHHHhhhccCchhhHHHHHHHHHHHHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccccCC
Q 003313 392 -YT-DSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDP 469 (831)
Q Consensus 392 -v~-~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~ 469 (831)
++ ..+|+. +..|+++.+.+ ..+++.+.++++.++|+|+++++++. +++|+++++|+
T Consensus 511 Gv~~~~~g~~--~~ig~~~~~~~-------~~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~i~l~d~ 568 (741)
T PRK11033 511 GIEGQVNGER--VLICAPGKLPP-------LADAFAGQINELESAGKTVVLVLRND-------------DVLGLIALQDT 568 (741)
T ss_pred EEEEEECCEE--EEEecchhhhh-------ccHHHHHHHHHHHhCCCEEEEEEECC-------------EEEEEEEEecC
Confidence 22 235643 45689988754 12334455678889999999999865 89999999999
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHH
Q 003313 470 PRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHK 549 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K 549 (831)
+|+|++++|++|+++|++++|+|||+..+|.++|+++||. .+++++|+||
T Consensus 569 ~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~------------------------------~~~~~~p~~K 618 (741)
T PRK11033 569 LRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID------------------------------FRAGLLPEDK 618 (741)
T ss_pred CchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC------------------------------eecCCCHHHH
Confidence 9999999999999999999999999999999999999994 3678899999
Q ss_pred HHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHH
Q 003313 550 YEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHA 629 (831)
Q Consensus 550 ~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~ 629 (831)
.++|+.+|+. +.|+|+|||.||+|||++||||||||+|++.++++||++++++++..+..++++||++++||++|+.|+
T Consensus 619 ~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a 697 (741)
T PRK11033 619 VKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITIA 697 (741)
T ss_pred HHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999965 589999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 003313 630 VSITIHIVLS 639 (831)
Q Consensus 630 l~~ni~~~~~ 639 (831)
+.+|+..+..
T Consensus 698 ~~~n~~~i~~ 707 (741)
T PRK11033 698 LGLKAIFLVT 707 (741)
T ss_pred HHHHHHHHHH
Confidence 9999855443
No 25
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-70 Score=600.82 Aligned_cols=644 Identities=22% Similarity=0.258 Sum_probs=458.6
Q ss_pred CCcccCCCCCccccCCHHHHHHHhCCCCCCCC-HHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHhHHHHHHHHHHHHHH
Q 003313 11 DPENCNCGGIDLARLPLDEVFGQLGTTRQGLS-SEDAEVRLKFFGSNKLEKKPENKFLKFLSFMWNPLSWVMETAALMAI 89 (831)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLs-~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~i~ail~~ 89 (831)
+++++|.+.|.--..+.++....++.. +|+. +.++..-.++||.|.++.+.+++-..|.+....||+ ++++..+..|
T Consensus 134 y~~~~e~~~F~~~~fp~~~~~g~~~k~-~G~~~~~~i~~a~~~~G~N~fdi~vPtF~eLFkE~A~aPfF-VFQVFcvgLW 211 (1160)
T KOG0209|consen 134 YLYDEEKGKFSRLTFPTDEPFGYFQKS-TGHEEESEIKLAKHKYGKNKFDIVVPTFSELFKEHAVAPFF-VFQVFCVGLW 211 (1160)
T ss_pred EEEcccccceeccccCcCCcchhhhhc-cCcchHHHHHHHHHHhcCCccccCCccHHHHHHHhccCcee-eHhHHhHHHH
Confidence 566777787877788888877776655 4565 345555556699999999999998999999999995 4555555556
Q ss_pred HHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEeCCCcCCCcEEEEcC---
Q 003313 90 ALANGGGQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKF--- 166 (831)
Q Consensus 90 ~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~~--- 166 (831)
++. .+|+.+++-+++++....--..|+.+.-..++... .-|..+.|.|+++|+.+.++||.|||+|.+..
T Consensus 212 CLD------eyWYySlFtLfMli~fE~tlV~Qrm~~lse~R~Mg-~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~e 284 (1160)
T KOG0209|consen 212 CLD------EYWYYSLFTLFMLIAFEATLVKQRMRTLSEFRTMG-NKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAE 284 (1160)
T ss_pred HhH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCceEEEEEecCcceeccccccCCCceEEeccCcc
Confidence 654 48998888777766554444455555544444432 24667899999999999999999999999987
Q ss_pred CCccccceEEEecCCeEEEcccccCCCccccccC-----------------CCeeeecceeee-----------------
Q 003313 167 GDVIPADARLLEGDPLKIDQSELTGESLTVTKET-----------------GDEVFSGLTCKH----------------- 212 (831)
Q Consensus 167 G~~iPaDg~ll~g~~~~Vdes~LTGEs~pv~K~~-----------------g~~v~aGt~v~~----------------- 212 (831)
...||||.+++.| +|.|||++|||||.|..|.+ ...+|+||.+.+
T Consensus 285 d~~vPCDllLL~G-sciVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~ 363 (1160)
T KOG0209|consen 285 DSHVPCDLLLLRG-SCIVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCV 363 (1160)
T ss_pred cCcCCceEEEEec-ceeechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeE
Confidence 6789999999999 79999999999999999976 137999999987
Q ss_pred -------ccchhhhHHHhhhc-cCccCcHHHHHHHHHHH-HHHHHHHHHHHHHHHHhhhch-------hhHhhHHH----
Q 003313 213 -------VHSFFGKAADLVDS-TEVVGHFQQVLTSIGNF-CICFITVGMILEIIVMFPIQH-------RLYRDRIN---- 272 (831)
Q Consensus 213 -------~~t~~g~~~~~~~~-~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~---- 272 (831)
-+|.-|+..+.+.- +++.+ +|..-.+ +++++++++++ ..++.+.. ..+...+.
T Consensus 364 a~VlrTGFeTSQGkLvRtilf~aervT-----aNn~Etf~FILFLlVFAia--Aa~Yvwv~Gskd~~RsrYKL~LeC~LI 436 (1160)
T KOG0209|consen 364 AYVLRTGFETSQGKLVRTILFSAERVT-----ANNRETFIFILFLLVFAIA--AAGYVWVEGSKDPTRSRYKLFLECTLI 436 (1160)
T ss_pred EEEEeccccccCCceeeeEEecceeee-----eccHHHHHHHHHHHHHHHH--hhheEEEecccCcchhhhheeeeeeEE
Confidence 23444444433221 22111 1111112 12222221211 11222111 11111110
Q ss_pred ---------H--HHHHHHHHHHhhhcCceEEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeecC-------CCC
Q 003313 273 ---------M--LSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFN-------RDM 334 (831)
Q Consensus 273 ---------~--l~~~l~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~-------~~~ 334 (831)
+ ++++...+...++|.+++|..|-.+.-.|++|+.|||||||||+..|.|.++--.... ...
T Consensus 437 lTSVvPpELPmELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~ 516 (1160)
T KOG0209|consen 437 LTSVVPPELPMELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKA 516 (1160)
T ss_pred EeccCCCCCchhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhC
Confidence 2 3444445677899999999999999999999999999999999999999985421001 112
Q ss_pred ChHHHHHHHHHhccc-----cCCChHHHHHHHHhCChHH----------HhhccceeEEecCCCCCceEEEEEEcC----
Q 003313 335 DKDILVLLAARASRL-----ENQDAIDAAIINMLADPKE----------ARANINEVHFLPFNPVDKRTAITYTDS---- 395 (831)
Q Consensus 335 ~~~~~l~~a~~~~~~-----~~~~~~~~ai~~~~~~~~~----------~~~~~~~l~~~~f~s~~k~~sv~v~~~---- 395 (831)
..+.+..+|+|++-. --+||+|+|.++..+-.-+ ...+.++.+.+.|+|.-||||++....
T Consensus 517 p~~t~~vlAscHsLv~le~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~ 596 (1160)
T KOG0209|consen 517 PNETVLVLASCHSLVLLEDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGS 596 (1160)
T ss_pred CchHHHHHHHHHHHHHhcCcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCC
Confidence 334566666665422 2369999999998742111 112467788899999999999887532
Q ss_pred CCcEEEEEccchHHHhhhccCchhhHHHHHHHHHHHHhccCeeeeeeeecCCCC--------CCCCCCCCceeeeecccc
Q 003313 396 EGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEM--------TEDSPGGPRSFCGLLPLF 467 (831)
Q Consensus 396 ~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~--------~~~~~e~~l~~lG~i~~~ 467 (831)
+-+++..+|||||.|.++.. +++..+++...+++++|.||+|++||.+++. +++++|++|+|.|++.|.
T Consensus 597 s~k~~~aVKGAPEvi~~ml~---dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~ 673 (1160)
T KOG0209|consen 597 SEKYFVAVKGAPEVIQEMLR---DVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFS 673 (1160)
T ss_pred ceEEEEEecCCHHHHHHHHH---hCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEe
Confidence 13678889999999998775 5788899999999999999999999998732 478999999999999999
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC-------------------CCcc-c---------
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMY-------------------PSSL-L--------- 518 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~-------------------~~~~-~--------- 518 (831)
-|+|+|++++|++|++++++++|+||||+.||.++|+++||..... ++.. +
T Consensus 674 CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~ 753 (1160)
T KOG0209|consen 674 CPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKT 753 (1160)
T ss_pred CCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccch
Confidence 9999999999999999999999999999999999999999965311 0000 0
Q ss_pred ----------cCCcCCCC-CcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecC
Q 003313 519 ----------LGRDKDEN-EALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAG 587 (831)
Q Consensus 519 ----------~~~~~~~~-~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~ 587 (831)
.|..++.. ..+.+.+++..+.||||+.|.||..++..+++.|+.++|||||+||+.|||+||||||+-+
T Consensus 754 ~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~ 833 (1160)
T KOG0209|consen 754 LLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLN 833 (1160)
T ss_pred hhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhc
Confidence 01111111 1124556666778999999999999999999999999999999999999999999999843
Q ss_pred chHHHh-----------------------------------------------------------------------hhc
Q 003313 588 ATEAAR-----------------------------------------------------------------------GAA 596 (831)
Q Consensus 588 ~~~~a~-----------------------------------------------------------------------~aa 596 (831)
++..++ -||
T Consensus 834 ~~~e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAA 913 (1160)
T KOG0209|consen 834 NPEESKKDKEKRRKKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAA 913 (1160)
T ss_pred CChhhhhHHhhhhhhccccCchhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCcccccccccccc
Confidence 322000 024
Q ss_pred CEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHhhccchhccccCCC
Q 003313 597 DIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLLALIWEYDFPPFMVLIIAVLNDGTIITISKGRV 675 (831)
Q Consensus 597 divl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~ 675 (831)
.+.-.-.+.++|-+.|+.||++.-+.-|.+.... -|..+.....-....-|.-|+..|...-.++.....+.++..++
T Consensus 914 PFTsK~asv~~v~~IIrQGRctLVtTlQMfKILA-LN~LisAYslSvlyldGVKfgD~QaTisGlLla~cFlfISrskP 991 (1160)
T KOG0209|consen 914 PFTSKLASVSSVTHIIRQGRCTLVTTLQMFKILA-LNCLISAYSLSVLYLDGVKFGDTQATISGLLLAACFLFISRSKP 991 (1160)
T ss_pred ccccccchHHHHHHHHHhcchhHHHHHHHHHHHH-HHHHHHHHHHHHhhhcCceecchhHhHHHHHHHHHHhheecCCc
Confidence 4444445678899999999999988888766543 24322222222223345667888887777776655455555444
No 26
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=9.2e-70 Score=630.67 Aligned_cols=483 Identities=25% Similarity=0.370 Sum_probs=396.2
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEEC-CEEEEEeCCCcCCCcEEEEcCCCccccceEEEe
Q 003313 100 DWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRD-GQWKEQDAAVLVPGDIISIKFGDVIPADARLLE 178 (831)
Q Consensus 100 ~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rd-g~~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~ 178 (831)
+|..+.+++++++++..++.+.++|+++.+++|.+..|++++++|+ |++++|++++|+|||+|.|++||+|||||+|++
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~ 132 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE 132 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE
Confidence 4555666777888888999999999999999999999999999985 667999999999999999999999999999999
Q ss_pred cCCeEEEcccccCCCccccccCCCeeeecceeee-----------ccchhhhHHHhhhccC-ccCcHHHHHHHHHHHHHH
Q 003313 179 GDPLKIDQSELTGESLTVTKETGDEVFSGLTCKH-----------VHSFFGKAADLVDSTE-VVGHFQQVLTSIGNFCIC 246 (831)
Q Consensus 179 g~~~~Vdes~LTGEs~pv~K~~g~~v~aGt~v~~-----------~~t~~g~~~~~~~~~~-~~~~l~~~~~~~~~~~~~ 246 (831)
| ++.||||+|||||.|+.|.+||.||+||.+.+ .+|.+|++.++++++. .++++++.+++++++++.
T Consensus 133 g-~~~vdes~lTGEs~pv~k~~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~ 211 (562)
T TIGR01511 133 G-ESEVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVP 211 (562)
T ss_pred C-ceEEehHhhcCCCCcEEcCCCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 9 68999999999999999999999999999887 7899999999998774 789999999999988655
Q ss_pred HHHHHHHHHHHHHhhhchhhHhhHHH------------HHHHHHHHHHHhhhcCceEEccchhhhhhcCceEEEecCCCc
Q 003313 247 FITVGMILEIIVMFPIQHRLYRDRIN------------MLSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAA 314 (831)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~l~------------~l~~~l~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGT 314 (831)
.+++..++.++++. ..+..++. .+++++..++.+++|+|+++|+++++|+|+++|++|||||||
T Consensus 212 ~v~~~a~~~~~~~~----~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGT 287 (562)
T TIGR01511 212 VVIAIALITFVIWL----FALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGT 287 (562)
T ss_pred HHHHHHHHHHHHHH----HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCC
Confidence 44433332222211 11222221 456677889999999999999999999999999999999999
Q ss_pred cccCceEEEEEeeeecCCCCChHHHHHHHHHhccccCCChHHHHHHHHhCChHHHhhccceeEEecCCCCCceEEEEEEc
Q 003313 315 LTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAITYTD 394 (831)
Q Consensus 315 LT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sv~v~~ 394 (831)
||+|+|+|.++.. ..+.++++++.+++..+..++ ||+++|+++++.............+.+| .+.+...
T Consensus 288 LT~g~~~v~~i~~---~~~~~~~~~l~~aa~~e~~s~-HPia~Ai~~~~~~~~~~~~~~~~~~~~~----g~Gi~~~--- 356 (562)
T TIGR01511 288 LTQGKPTVTDVHV---FGDRDRTELLALAAALEAGSE-HPLAKAIVSYAKEKGITLVEVSDFKAIP----GIGVEGT--- 356 (562)
T ss_pred CcCCCEEEEEEec---CCCCCHHHHHHHHHHHhccCC-ChHHHHHHHHHHhcCCCcCCCCCeEEEC----CceEEEE---
Confidence 9999999998763 234567788888877776665 9999999988743211111112222222 1222222
Q ss_pred CCCcEEEEEccchHHHhhhccCchhhHHHHHHHHHHHHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccccCCCCCCh
Q 003313 395 SEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDS 474 (831)
Q Consensus 395 ~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~ 474 (831)
.+| ..+..|+++.+.+... .. ..+.++|.+++.++.++ +++|.+.++|++||++
T Consensus 357 ~~g--~~~~iG~~~~~~~~~~---~~--------~~~~~~g~~~~~~~~~~-------------~~~g~~~~~d~l~~~a 410 (562)
T TIGR01511 357 VEG--TKIQLGNEKLLGENAI---KI--------DGKAEQGSTSVLVAVNG-------------ELAGVFALEDQLRPEA 410 (562)
T ss_pred ECC--EEEEEECHHHHHhCCC---CC--------ChhhhCCCEEEEEEECC-------------EEEEEEEecccccHHH
Confidence 245 3467899998643211 11 12346899999988765 8999999999999999
Q ss_pred HHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHH
Q 003313 475 SDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVK 554 (831)
Q Consensus 475 ~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~ 554 (831)
+++|++|++.|++++|+|||+..++..+++++|++ +++++.|++|.++++
T Consensus 411 ~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~------------------------------~~~~~~p~~K~~~v~ 460 (562)
T TIGR01511 411 KEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN------------------------------VRAEVLPDDKAALIK 460 (562)
T ss_pred HHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc------------------------------EEccCChHHHHHHHH
Confidence 99999999999999999999999999999999983 478889999999999
Q ss_pred HHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 003313 555 ILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITI 634 (831)
Q Consensus 555 ~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni 634 (831)
.++++++.|+|+|||.||++|+++||+||+||+|++.++++||+++.++++..+.+++++||+++++|++|+.|++.+|+
T Consensus 461 ~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~ 540 (562)
T TIGR01511 461 ELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNV 540 (562)
T ss_pred HHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCChH
Q 003313 635 HIVLSFVLLALIWEYDFPPF 654 (831)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~ 654 (831)
..++..++.++.+++.++|+
T Consensus 541 ~~i~la~~~~~~~g~~~~p~ 560 (562)
T TIGR01511 541 IAIPIAAGVLYPIGILLSPA 560 (562)
T ss_pred HHHHHHHhhhhccccccCCC
Confidence 76665555555555556654
No 27
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=2e-70 Score=632.59 Aligned_cols=448 Identities=35% Similarity=0.531 Sum_probs=378.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCeEEEEECCEEEEEeCCCcCCCcEEEEcCCCccccceEEEecCCeEEE
Q 003313 108 VCLLIINSSISFIEESNAENATAALMA--HLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKID 185 (831)
Q Consensus 108 ~~~~~~~~~i~~~~~~~~~~~~~~l~~--~~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~g~~~~Vd 185 (831)
+++++++.+++.++++++++..+++.+ ..+++++|+|+| +++|++++|+|||+|.+++||+|||||+|++| .+.||
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g-~~~vd 80 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSG-SCFVD 80 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEc-cEEEE
Confidence 345677888899999999999999998 788999999999 99999999999999999999999999999999 79999
Q ss_pred cccccCCCccccccCCCeeeecceeee-----------ccchhhhHHHhhhccC-ccCcHHHHHHHHH-HHHHHHHHHHH
Q 003313 186 QSELTGESLTVTKETGDEVFSGLTCKH-----------VHSFFGKAADLVDSTE-VVGHFQQVLTSIG-NFCICFITVGM 252 (831)
Q Consensus 186 es~LTGEs~pv~K~~g~~v~aGt~v~~-----------~~t~~g~~~~~~~~~~-~~~~l~~~~~~~~-~~~~~~~~~~~ 252 (831)
||+|||||.|+.|.+|+.+++||.+.+ .++..+++..++.+.. .++++++..+++. .+.+.++++..
T Consensus 81 es~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la 160 (499)
T TIGR01494 81 ESNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIA 160 (499)
T ss_pred cccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998876 5678889999887765 4788999999998 45443333322
Q ss_pred HHHHHHHhhhc-h-----hhHhhHHH------------HHHHHHHHHHHhhhcCceEEccchhhhhhcCceEEEecCCCc
Q 003313 253 ILEIIVMFPIQ-H-----RLYRDRIN------------MLSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAA 314 (831)
Q Consensus 253 ~~~~~~~~~~~-~-----~~~~~~l~------------~l~~~l~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGT 314 (831)
++.++.++... . ..+..++. .+++++..+..+|+++|+++|+++++|+||+++++|||||||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGT 240 (499)
T TIGR01494 161 LAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGT 240 (499)
T ss_pred HHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCc
Confidence 22222221111 1 11122211 445667778899999999999999999999999999999999
Q ss_pred cccCceEEEEEeeeecCCCCChHHHHHHHHHhccccCCChHHHHHHHHhCChHHHhhccceeEEecCCCCCceEEEEEEc
Q 003313 315 LTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAITYTD 394 (831)
Q Consensus 315 LT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sv~v~~ 394 (831)
||+|+|+|.++... . . + ...+||++.|+++++.. +.++..||++.+++|+++++.
T Consensus 241 LT~~~~~v~~~~~~--~-~-------------~-~~s~hp~~~ai~~~~~~--------~~~~~~~f~~~~~~~~~~~~~ 295 (499)
T TIGR01494 241 LTKNEMSFKKVSVL--G-G-------------E-YLSGHPDERALVKSAKW--------KILNVFEFSSVRKRMSVIVRG 295 (499)
T ss_pred cccCceEEEEEEec--C-C-------------C-cCCCChHHHHHHHHhhh--------cCcceeccCCCCceEEEEEec
Confidence 99999999997641 1 0 1 23459999999988752 123568999999999988875
Q ss_pred CCCcEEEEEccchHHHhhhccCchhhHHHHHHHHHHHHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccccCCCCCCh
Q 003313 395 SEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDS 474 (831)
Q Consensus 395 ~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~ 474 (831)
.++ .++||+++.+.+.|.. +.+..++++++|+|++++|+++ +++|++.++|++|+++
T Consensus 296 ~~~---~~~~G~~~~i~~~~~~-------~~~~~~~~~~~g~~~~~~a~~~-------------~~~g~i~l~d~lr~~~ 352 (499)
T TIGR01494 296 PDG---TYVKGAPEFVLSRVKD-------LEEKVKELAQSGLRVLAVASKE-------------TLLGLLGLEDPLRDDA 352 (499)
T ss_pred CCc---EEEeCCHHHHHHhhHH-------HHHHHHHHHhCCCEEEEEEECC-------------eEEEEEEecCCCchhH
Confidence 333 4789999999988752 2334456788999999999886 8999999999999999
Q ss_pred HHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHH
Q 003313 475 SDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVK 554 (831)
Q Consensus 475 ~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~ 554 (831)
+++|+.|+++|++++|+|||+..+|..+|+++|+ +++++|++|.++|+
T Consensus 353 ~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi--------------------------------~~~~~p~~K~~~v~ 400 (499)
T TIGR01494 353 KETISELREAGIRVIMLTGDNVLTAKAIAKELGI--------------------------------FARVTPEEKAALVE 400 (499)
T ss_pred HHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc--------------------------------eeccCHHHHHHHHH
Confidence 9999999999999999999999999999999996 68899999999999
Q ss_pred HHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 003313 555 ILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITI 634 (831)
Q Consensus 555 ~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni 634 (831)
.+|+.|+.|+|+|||.||+||+++|||||+|+ ++++||++++++++..++.++++||++++++++++.|.+.+|+
T Consensus 401 ~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~ 475 (499)
T TIGR01494 401 ALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNL 475 (499)
T ss_pred HHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999997 6899999999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 003313 635 HIVLSFVL 642 (831)
Q Consensus 635 ~~~~~~~~ 642 (831)
..++..++
T Consensus 476 ~~~~~a~~ 483 (499)
T TIGR01494 476 ILIPLAAL 483 (499)
T ss_pred HHHHHHHH
Confidence 75554443
No 28
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=1.2e-69 Score=631.82 Aligned_cols=494 Identities=27% Similarity=0.373 Sum_probs=402.9
Q ss_pred HHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECC-EEEEEeCCCcCC
Q 003313 80 VMETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDG-QWKEQDAAVLVP 158 (831)
Q Consensus 80 ~l~i~ail~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg-~~~~i~~~~lv~ 158 (831)
++.++++++++.+ .|.++.+++++++++..++.++++|+++.+++|.+..|++++|+||| ++++|++++|+|
T Consensus 4 l~~~~~~~~~~~~-------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~ 76 (556)
T TIGR01525 4 LMALATIAAYAMG-------LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQV 76 (556)
T ss_pred HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCC
Confidence 3455566666665 78899999999999999999999999999999999999999999996 999999999999
Q ss_pred CcEEEEcCCCccccceEEEecCCeEEEcccccCCCccccccCCCeeeecceeee-----------ccchhhhHHHhhhcc
Q 003313 159 GDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKETGDEVFSGLTCKH-----------VHSFFGKAADLVDST 227 (831)
Q Consensus 159 GDiI~l~~G~~iPaDg~ll~g~~~~Vdes~LTGEs~pv~K~~g~~v~aGt~v~~-----------~~t~~g~~~~~~~~~ 227 (831)
||+|.+++||+|||||+|++| ++.||||+|||||.|+.|.+|+.||+||.+.+ .+|+.|++.+++.++
T Consensus 77 GDiv~v~~G~~iP~Dg~vi~g-~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~ 155 (556)
T TIGR01525 77 GDIVIVRPGERIPVDGVVISG-ESEVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEA 155 (556)
T ss_pred CCEEEECCCCEeccceEEEec-ceEEeehhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHH
Confidence 999999999999999999999 58999999999999999999999999999877 689999999988776
Q ss_pred C-ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhch-hhHhhHHH------------HHHHHHHHHHHhhhcCceEEc
Q 003313 228 E-VVGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQH-RLYRDRIN------------MLSVTLAIASYRLSQRGAITK 293 (831)
Q Consensus 228 ~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~------------~l~~~l~~~~~~l~~~~ilvk 293 (831)
. .++++++.++++++++..+++++.++.+++++.... ..+..++. .++++++.++.+++|+|+++|
T Consensus 156 ~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gilvk 235 (556)
T TIGR01525 156 QSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGALGALYRALAVLVVACPCALGLATPVAILVAIGVAARRGILIK 235 (556)
T ss_pred hhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCceec
Confidence 4 789999999999987655443333333333221111 11222221 456778889999999999999
Q ss_pred cchhhhhhcCceEEEecCCCccccCceEEEEEeeeecCCCCC--hHHHHHHHHHhccccCCChHHHHHHHHhCChHHHhh
Q 003313 294 RMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMD--KDILVLLAARASRLENQDAIDAAIINMLADPKEARA 371 (831)
Q Consensus 294 ~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~--~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~ 371 (831)
+++++|++|++|++|||||||||+|+|+|.++.. . .+.+ +++++.+++..+..+. ||++.|+++++........
T Consensus 236 ~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~--~-~~~~~~~~~~l~~a~~~e~~~~-hp~~~Ai~~~~~~~~~~~~ 311 (556)
T TIGR01525 236 GGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEP--L-DDASISEEELLALAAALEQSSS-HPLARAIVRYAKKRGLELP 311 (556)
T ss_pred CchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEe--c-CCCCccHHHHHHHHHHHhccCC-ChHHHHHHHHHHhcCCCcc
Confidence 9999999999999999999999999999998763 1 2223 6677777776665544 9999999998753211000
Q ss_pred ccc-eeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccCchhhHHHHHHHHHHHHhccCeeeeeeeecCCCCC
Q 003313 372 NIN-EVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMT 450 (831)
Q Consensus 372 ~~~-~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~ 450 (831)
. + ..+.+| .+.....+ +|. ..+..|+++.+. ... .+ ..+.++.++.+.++|+|+++++.++
T Consensus 312 ~-~~~~~~~~----~~gi~~~~---~g~-~~~~lg~~~~~~--~~~-~~-~~~~~~~~~~~~~~g~~~~~v~~~~----- 373 (556)
T TIGR01525 312 K-QEDVEEVP----GKGVEATV---DGQ-EEVRIGNPRLLE--LAA-EP-ISASPDLLNEGESQGKTVVFVAVDG----- 373 (556)
T ss_pred c-ccCeeEec----CCeEEEEE---CCe-eEEEEecHHHHh--hcC-CC-chhhHHHHHHHhhCCcEEEEEEECC-----
Confidence 0 1 112221 11222221 341 345678888761 111 11 1223455667888999999999865
Q ss_pred CCCCCCCceeeeeccccCCCCCChHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcc
Q 003313 451 EDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLG-VCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEAL 529 (831)
Q Consensus 451 ~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~G-i~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~ 529 (831)
+++|.+.++|++||+++++|++|+++| +++.|+|||+..++.++++++|+..
T Consensus 374 --------~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~------------------- 426 (556)
T TIGR01525 374 --------ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE------------------- 426 (556)
T ss_pred --------EEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe-------------------
Confidence 899999999999999999999999999 9999999999999999999999952
Q ss_pred cHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHH
Q 003313 530 PVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVIC 609 (831)
Q Consensus 530 ~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~ 609 (831)
+|+++.|++|.++++.+++.++.|+|+|||.||++|+++||+|+++|++++.+++.||+++.+++++.+.
T Consensus 427 ----------~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~~~l~ 496 (556)
T TIGR01525 427 ----------VHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLSSLP 496 (556)
T ss_pred ----------eeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCHHHHH
Confidence 5889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003313 610 SAVLTSRTVFQIMKNCMIHAVSITIHIVLSF 640 (831)
Q Consensus 610 ~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~ 640 (831)
+++++||++++|+++++.|++.+|+..++..
T Consensus 497 ~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a 527 (556)
T TIGR01525 497 TAIDLSRKTRRIIKQNLAWALGYNLVAIPLA 527 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999665443
No 29
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=1.5e-69 Score=626.87 Aligned_cols=474 Identities=28% Similarity=0.393 Sum_probs=395.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEeCCCcCCC
Q 003313 80 VMETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPG 159 (831)
Q Consensus 80 ~l~i~ail~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~lv~G 159 (831)
++.++++++++.+ +|+++.+++++++++..++.++++|+++.+++|.+..+++++|+|||+++++++++|+||
T Consensus 4 l~~~a~~~~~~~~-------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~G 76 (536)
T TIGR01512 4 LMALAALGAVAIG-------EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVG 76 (536)
T ss_pred HHHHHHHHHHHHh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCC
Confidence 4566777777765 799999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEcCCCccccceEEEecCCeEEEcccccCCCccccccCCCeeeecceeee-----------ccchhhhHHHhhhccC
Q 003313 160 DIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKETGDEVFSGLTCKH-----------VHSFFGKAADLVDSTE 228 (831)
Q Consensus 160 DiI~l~~G~~iPaDg~ll~g~~~~Vdes~LTGEs~pv~K~~g~~v~aGt~v~~-----------~~t~~g~~~~~~~~~~ 228 (831)
|+|.+++||+|||||++++| ++.||||+|||||.|+.|++||.+|+||.+.+ .+|.+|++.++++++.
T Consensus 77 Div~v~~G~~iP~Dg~ii~g-~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~ 155 (536)
T TIGR01512 77 DVVVVKPGERVPVDGVVLSG-TSTVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQ 155 (536)
T ss_pred CEEEEcCCCEeecceEEEeC-cEEEEecccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHHh
Confidence 99999999999999999999 68999999999999999999999999998876 7899999999888764
Q ss_pred -ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhh--HhhHHH------------HHHHHHHHHHHhhhcCceEEc
Q 003313 229 -VVGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRL--YRDRIN------------MLSVTLAIASYRLSQRGAITK 293 (831)
Q Consensus 229 -~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~------------~l~~~l~~~~~~l~~~~ilvk 293 (831)
.++++++.++++++++..+++++.++.+++++...... +..++. .+++++..++.+++|+|+++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gilik 235 (536)
T TIGR01512 156 SRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLKRWPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGILIK 235 (536)
T ss_pred hCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeEEc
Confidence 78899999999998766555443443333333221111 111211 356778889999999999999
Q ss_pred cchhhhhhcCceEEEecCCCccccCceEEEEEeeeecCCCCChHHHHHHHHHhccccCCChHHHHHHHHhCChHHHhhcc
Q 003313 294 RMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANI 373 (831)
Q Consensus 294 ~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~ 373 (831)
+++++|++|+++++|||||||||+|+|+|.++.. .+++.+++..+..+ .||++.|+++++.+.. .+
T Consensus 236 ~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~---------~~~l~~a~~~e~~~-~hp~~~Ai~~~~~~~~----~~ 301 (536)
T TIGR01512 236 GGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVP---------AEVLRLAAAAEQAS-SHPLARAIVDYARKRE----NV 301 (536)
T ss_pred CcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeH---------HHHHHHHHHHhccC-CCcHHHHHHHHHHhcC----CC
Confidence 9999999999999999999999999999988652 26677776655544 4999999998875321 22
Q ss_pred ceeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccCchhhHHHHHHHHHHHHhccCeeeeeeeecCCCCCCCC
Q 003313 374 NEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDS 453 (831)
Q Consensus 374 ~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~ 453 (831)
...+.+|. +..... .+|+ .+..|+++.+.+.. ...+.++|.+++.++.+.
T Consensus 302 ~~~~~~~g----~gi~~~---~~g~--~~~ig~~~~~~~~~-------------~~~~~~~~~~~~~v~~~~-------- 351 (536)
T TIGR01512 302 ESVEEVPG----EGVRAV---VDGG--EVRIGNPRSLEAAV-------------GARPESAGKTIVHVARDG-------- 351 (536)
T ss_pred cceEEecC----CeEEEE---ECCe--EEEEcCHHHHhhcC-------------CcchhhCCCeEEEEEECC--------
Confidence 22232221 112211 2454 34568887653311 014566788888887654
Q ss_pred CCCCceeeeeccccCCCCCChHHHHHHHHhCCC-eEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHH
Q 003313 454 PGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGV-CVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVD 532 (831)
Q Consensus 454 ~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi-~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~ 532 (831)
.++|.+.++|++||+++++|++|+++|+ ++.|+|||+..++..+++++|+..
T Consensus 352 -----~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~---------------------- 404 (536)
T TIGR01512 352 -----TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE---------------------- 404 (536)
T ss_pred -----EEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh----------------------
Confidence 8999999999999999999999999999 999999999999999999999952
Q ss_pred HHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEec-CchHHHhhhcCEEEeCCChhHHHHH
Q 003313 533 ELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVA-GATEAARGAADIVLTEPGLSVICSA 611 (831)
Q Consensus 533 ~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~-~~~~~a~~aadivl~~~~~~~i~~~ 611 (831)
+|+++.|++|.++++.++++++.|+|+|||.||++|+++||+||++| ++++.++++||+++.++++..+.++
T Consensus 405 -------~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~ 477 (536)
T TIGR01512 405 -------VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQA 477 (536)
T ss_pred -------hhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHH
Confidence 58899999999999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 003313 612 VLTSRTVFQIMKNCMIHAVSITIHIVLS 639 (831)
Q Consensus 612 i~~gR~~~~~i~~~i~~~l~~ni~~~~~ 639 (831)
+++||++++++++|+.|++.+|+..++.
T Consensus 478 i~~~r~~~~~i~~nl~~a~~~n~~~i~~ 505 (536)
T TIGR01512 478 IRLARRTRRIVKQNVVIALGIILLLILL 505 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999865443
No 30
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=2.3e-72 Score=664.32 Aligned_cols=763 Identities=16% Similarity=0.188 Sum_probs=526.6
Q ss_pred HHHhcCCCccCCCCCcHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 003313 49 RLKFFGSNKLEKKPENKF----LKFLSFMWNPLSWVMETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFIEESN 124 (831)
Q Consensus 49 r~~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~l~i~ail~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~~ 124 (831)
+...|-.|.+...|++.+ +.+++||.++.+++|++.++++++... +.+.|...+.+++++.++.+.+.++++|
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip~~---~~~~~~~~~pl~~vl~~t~iKd~~eD~r 104 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIPLS---PFNPYTTLVPLLFVLGITAIKDAIEDYR 104 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCccc---ccCccceeeceeeeehHHHHHHHHhhhh
Confidence 555899999999998765 788999999999999999999998632 3456667777778888888889999999
Q ss_pred HHHHHHHHhccCCCeEEEEECCE-EEEEeCCCcCCCcEEEEcCCCccccceEEEecC----CeEEEcccccCCCcccccc
Q 003313 125 AENATAALMAHLTPKTKVLRDGQ-WKEQDAAVLVPGDIISIKFGDVIPADARLLEGD----PLKIDQSELTGESLTVTKE 199 (831)
Q Consensus 125 ~~~~~~~l~~~~~~~~~V~rdg~-~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~g~----~~~Vdes~LTGEs~pv~K~ 199 (831)
+++...+. +..++.|.|++. +++..|+++++||+|++..++.+|||.++++++ -|+|+++.|+||+....|+
T Consensus 105 R~~~D~~i---N~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~ 181 (1151)
T KOG0206|consen 105 RHKQDKEV---NNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQ 181 (1151)
T ss_pred hhhccHHh---hcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceee
Confidence 88776544 567899998644 899999999999999999999999999999875 3999999999999988775
Q ss_pred C-----------------------------------------------CCeeeecceeee------ccchhhhHHHhhhc
Q 003313 200 T-----------------------------------------------GDEVFSGLTCKH------VHSFFGKAADLVDS 226 (831)
Q Consensus 200 ~-----------------------------------------------g~~v~aGt~v~~------~~t~~g~~~~~~~~ 226 (831)
. .+.++.|+.+++ ...+.|..++.+++
T Consensus 182 ~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~~n 261 (1151)
T KOG0206|consen 182 ALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLMQN 261 (1151)
T ss_pred ehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHHHh
Confidence 3 023556666655 56677888888877
Q ss_pred cC----ccCcHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhhhc----h-h-h-Hh-------hHHH-----------HHHH
Q 003313 227 TE----VVGHFQQVLTSIGNFCICFITVGMILEIIV-MFPIQ----H-R-L-YR-------DRIN-----------MLSV 276 (831)
Q Consensus 227 ~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~-~-~-~~-------~~l~-----------~l~~ 276 (831)
+. +++++++.++.....+++.+...+++..+. ..... . . . +. .+.. ++++
T Consensus 262 ~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~~liPI 341 (1151)
T KOG0206|consen 262 SGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQYLIPI 341 (1151)
T ss_pred cCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhhceEEE
Confidence 63 667788888877655433332222221111 11100 0 0 0 00 0010 0111
Q ss_pred HH-----------HH---HHHhh----hcCceEEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeecCCCCCh--
Q 003313 277 TL-----------AI---ASYRL----SQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDK-- 336 (831)
Q Consensus 277 ~l-----------~~---~~~~l----~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~-- 336 (831)
++ ++ .-..| ......+|+.+..|+||++++|++|||||||+|.|++.+|.+++..++...
T Consensus 342 SLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~~~ 421 (1151)
T KOG0206|consen 342 SLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNVTE 421 (1151)
T ss_pred EEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCCCh
Confidence 10 00 01122 245788999999999999999999999999999999999987543222110
Q ss_pred ------------------------------------------HHH-HHHHHHhccc------------cCCChHHHHHHH
Q 003313 337 ------------------------------------------DIL-VLLAARASRL------------ENQDAIDAAIIN 361 (831)
Q Consensus 337 ------------------------------------------~~~-l~~a~~~~~~------------~~~~~~~~ai~~ 361 (831)
.+. ..+|.|++.. ....|.|.|++.
T Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~ 501 (1151)
T KOG0206|consen 422 VEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVE 501 (1151)
T ss_pred hhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHH
Confidence 112 2233333211 113688999988
Q ss_pred HhCChHH----------------HhhccceeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhcc-CchhhHHHH
Q 003313 362 MLADPKE----------------ARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQ-EKEEIGGKV 424 (831)
Q Consensus 362 ~~~~~~~----------------~~~~~~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~-~~~~~~~~~ 424 (831)
.+.+.+- ....|+.++.++|+|.||||||+|++++|+..++||||+..|++++. +.....++.
T Consensus 502 aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e~T 581 (1151)
T KOG0206|consen 502 AARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLREKT 581 (1151)
T ss_pred HHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHHHH
Confidence 7643110 24689999999999999999999999999999999999999999998 445667788
Q ss_pred HHHHHHHHhccCeeeeeeeecCCCCC-------------------------CCCCCCCceeeeeccccCCCCCChHHHHH
Q 003313 425 HEIINKLAEKGLRSLAVAVQEVPEMT-------------------------EDSPGGPRSFCGLLPLFDPPRHDSSDTIH 479 (831)
Q Consensus 425 ~~~~~~~~~~G~r~l~~a~~~~~~~~-------------------------~~~~e~~l~~lG~i~~~D~lr~~~~~~I~ 479 (831)
.+++++++.+|+|++++|||.+++++ .+.+|+||+++|..++||+++++++++|+
T Consensus 582 ~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~ 661 (1151)
T KOG0206|consen 582 QEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIA 661 (1151)
T ss_pred HHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHH
Confidence 88999999999999999999998653 24589999999999999999999999999
Q ss_pred HHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccC---------------------------------------
Q 003313 480 RALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLG--------------------------------------- 520 (831)
Q Consensus 480 ~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~--------------------------------------- 520 (831)
.|++||||+||+|||..+||.+||..|++..+....-.+..
T Consensus 662 ~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 741 (1151)
T KOG0206|consen 662 KLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEKPF 741 (1151)
T ss_pred HHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcCCc
Confidence 99999999999999999999999999999765332111111
Q ss_pred ------CcCCCCCcc----cHHHHHHh--cCcEEEeChHHHHHHHHHHhh-cCCEEEEEcCCccChhhhccCCeeEEec-
Q 003313 521 ------RDKDENEAL----PVDELIEK--ADGFTDVFAEHKYEIVKILQE-KKHVVGMTGDGVNDAPALKKADIGIAVA- 586 (831)
Q Consensus 521 ------~~~~~~~~~----~~~~~~~~--~~v~~~~~P~~K~~iv~~l~~-~g~~v~~iGDG~ND~~al~~AdvgIa~~- 586 (831)
+.+...... .+.++... ..++||++|.||+.+|+..++ .+.++++||||+||++|+++|||||+++
T Consensus 742 aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG 821 (1151)
T KOG0206|consen 742 ALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISG 821 (1151)
T ss_pred eEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeecc
Confidence 100000000 11222222 247999999999999999975 5889999999999999999999999995
Q ss_pred CchHHHhhhcCEEEeCCChhHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC----ChHHHHHHHH
Q 003313 587 GATEAARGAADIVLTEPGLSVICSAV-LTSRTVFQIMKNCMIHAVSITIHIVLSFVLLALIWEYDF----PPFMVLIIAV 661 (831)
Q Consensus 587 ~~~~~a~~aadivl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~~~----~~~~~l~~~~ 661 (831)
.....|..+||+.+.+ |+-+.+++ .|||+.|.|+.+++.|.+++|+...+..+++.++.++.. .++++.++|+
T Consensus 822 ~EGmQAvmsSD~AIaq--FrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~lyNv 899 (1151)
T KOG0206|consen 822 QEGMQAVMSSDFAIAQ--FRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLYNV 899 (1151)
T ss_pred chhhhhhhcccchHHH--HHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEEeE
Confidence 4444556799999966 77777765 789999999999999999999999899999888877644 4444444444
Q ss_pred -hhccchhccccCCCCCC-----CCC--------CccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccCC
Q 003313 662 -LNDGTIITISKGRVKSS-----LRP--------DGWKLNEIFAAGIVIGNYLALVTILFYWVVVHTDFFETHFHVRSLS 727 (831)
Q Consensus 662 -~~~~~~~~l~~~~~~~~-----~~~--------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 727 (831)
|+.+|++.++.-..+.+ .-| +.....+.++.+++.|+++++++|++.+..+... .....|. .
T Consensus 900 ~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff~~~~~~~~~-~~~~~G~---~ 975 (1151)
T KOG0206|consen 900 LFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFFLPYLVFEEQ-AVTSNGL---T 975 (1151)
T ss_pred EeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeeeeeeHhhheee-eeccCCC---c
Confidence 55666777765433322 111 1122345666677779999999986665554322 1111121 1
Q ss_pred CcHHHHHHHHHHHHHHHHHHH-hhhhccCCCCCCcCchHHHHHHHHHHHHHHHHHHHhhh--------cccccccchhHH
Q 003313 728 SNTEEISSAVHLQVSIISQAL-IFVTRSQSWSFLERPGALLMCAFVLAQLVATLIAVYAH--------ISFAYISGIGWG 798 (831)
Q Consensus 728 ~~~~~~~t~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~ 798 (831)
.+.....+..|+.+++...+. .+.+. .|.|++... ++.++++..++..++...++ .+........+.
T Consensus 976 ~d~~~~G~~~~T~~Vivv~~~iaL~~~--ywT~i~~i~--i~gSi~~~f~f~~iy~~~~~~~~~~~~~~~~~~~~~~~p~ 1051 (1151)
T KOG0206|consen 976 ADYWTLGTTVFTIIVIVVNLKIALETS--YWTWINHIV--IWGSILLWFVFLFIYSELTPAISTPDPFYGVAEHLLSSPS 1051 (1151)
T ss_pred CChhhccceEEEEEEEEEEeeeeeeeh--heeHHHHHH--HHHHHHHHHHHHHHHhccccccCCCccHHHHHHHHhcCch
Confidence 112222233333333222222 12222 233332221 12222222222222211000 111112223445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 003313 799 WAGVIWLYSLVFYILLDIIKFTVRTLSRE 827 (831)
Q Consensus 799 ~~~~~~~~~~~~~~~~e~~k~~~r~~~~~ 827 (831)
+|+.+++.+++.++++-++|.+.+.+.|.
T Consensus 1052 fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt 1080 (1151)
T KOG0206|consen 1052 FWLTLLLTVVAALLPDFVYKSLQRTFFPT 1080 (1151)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHhhCCc
Confidence 77777889999999999999999865554
No 31
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=7e-69 Score=652.33 Aligned_cols=503 Identities=22% Similarity=0.283 Sum_probs=408.7
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEeCCCcCCCcEEEEcCCCccccceEEEec
Q 003313 100 DWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEG 179 (831)
Q Consensus 100 ~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~g 179 (831)
+|.++..+++++.++.+++...+.|+++.+++|.++.|++++++|||++++|+.++|+|||+|.|++||+|||||+|++|
T Consensus 285 ~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g 364 (834)
T PRK10671 285 YYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQG 364 (834)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEc
Confidence 34446778888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEcccccCCCccccccCCCeeeecceeee-----------ccchhhhHHHhhhccC-ccCcHHHHHHHHHHHHHHH
Q 003313 180 DPLKIDQSELTGESLTVTKETGDEVFSGLTCKH-----------VHSFFGKAADLVDSTE-VVGHFQQVLTSIGNFCICF 247 (831)
Q Consensus 180 ~~~~Vdes~LTGEs~pv~K~~g~~v~aGt~v~~-----------~~t~~g~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~ 247 (831)
++.||||+|||||.|+.|.+||.||+||.+.+ .+|.+|++.++++++. .++++|+.+++++++++.+
T Consensus 365 -~~~vdeS~lTGEs~pv~k~~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~ 443 (834)
T PRK10671 365 -EAWLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPV 443 (834)
T ss_pred -eEEEeehhhcCCCCCEecCCCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999887 7899999999998774 7889999999999876555
Q ss_pred HHHHHHHHHHHHhhhchh-----hHhhHHH------------HHHHHHHHHHHhhhcCceEEccchhhhhhcCceEEEec
Q 003313 248 ITVGMILEIIVMFPIQHR-----LYRDRIN------------MLSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSV 310 (831)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~-----~~~~~l~------------~l~~~l~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~D 310 (831)
+++..++.+++++..... .+..++. .+++++..++.+++|+|+++|+++++|++++++++|||
T Consensus 444 v~~~a~~~~~~~~~~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fD 523 (834)
T PRK10671 444 VVVIALVSAAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFD 523 (834)
T ss_pred HHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEc
Confidence 444333322222221111 1111221 34566777899999999999999999999999999999
Q ss_pred CCCccccCceEEEEEeeeecCCCCChHHHHHHHHHhccccCCChHHHHHHHHhCChHHHhhccceeEEecCCCCCc-eEE
Q 003313 311 KTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDK-RTA 389 (831)
Q Consensus 311 KTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~f~s~~k-~~s 389 (831)
||||||+|+|+|.++.. ..+.++++++.+++..+..++ ||+++|+++++.+.. .... .+|..... .+.
T Consensus 524 KTGTLT~g~~~v~~~~~---~~~~~~~~~l~~a~~~e~~s~-hp~a~Ai~~~~~~~~--~~~~-----~~~~~~~g~Gv~ 592 (834)
T PRK10671 524 KTGTLTEGKPQVVAVKT---FNGVDEAQALRLAAALEQGSS-HPLARAILDKAGDMT--LPQV-----NGFRTLRGLGVS 592 (834)
T ss_pred CCCccccCceEEEEEEc---cCCCCHHHHHHHHHHHhCCCC-CHHHHHHHHHHhhCC--CCCc-----ccceEecceEEE
Confidence 99999999999988652 234567778888777766555 999999998764210 0111 12222221 111
Q ss_pred EEEEcCCCcEEEEEccchHHHhhhccCchhhHHHHHHHHHHHHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccccCC
Q 003313 390 ITYTDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDP 469 (831)
Q Consensus 390 v~v~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~ 469 (831)
.. .+|+ .+.+|+++.+.+.... .+.+.+.++.+.++|.+++++++++ +++|++.++|+
T Consensus 593 ~~---~~g~--~~~~G~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~~~l~d~ 650 (834)
T PRK10671 593 GE---AEGH--ALLLGNQALLNEQQVD----TKALEAEITAQASQGATPVLLAVDG-------------KAAALLAIRDP 650 (834)
T ss_pred EE---ECCE--EEEEeCHHHHHHcCCC----hHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEccCc
Confidence 11 2453 4567999987542211 2345566677889999999999876 79999999999
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHH
Q 003313 470 PRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHK 549 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K 549 (831)
+||+++++|++|++.|++++|+|||+..++..+++++||.. +++++.|++|
T Consensus 651 ~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~-----------------------------~~~~~~p~~K 701 (834)
T PRK10671 651 LRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE-----------------------------VIAGVLPDGK 701 (834)
T ss_pred chhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE-----------------------------EEeCCCHHHH
Confidence 99999999999999999999999999999999999999952 6899999999
Q ss_pred HHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHH
Q 003313 550 YEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHA 629 (831)
Q Consensus 550 ~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~ 629 (831)
.+.++.++.+++.|+|+|||.||++|+++||+||+||+|++.++++||++++++++..|..++++||+++++|++|+.|+
T Consensus 702 ~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a 781 (834)
T PRK10671 702 AEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGA 781 (834)
T ss_pred HHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHh-ccCCCChHHHHHHHHhhcc
Q 003313 630 VSITIHIVLSFVLLALI-WEYDFPPFMVLIIAVLNDG 665 (831)
Q Consensus 630 l~~ni~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~ 665 (831)
+.||+..++..++.+.. +++.++|+.-.....+.++
T Consensus 782 ~~yn~~~i~~a~g~~~p~~g~~l~p~~a~~~m~~ss~ 818 (834)
T PRK10671 782 FIYNSLGIPIAAGILWPFTGTLLNPVVAGAAMALSSI 818 (834)
T ss_pred HHHHHHHHHHHHhchhhhhhcccCHHHHHHHhcccce
Confidence 99999766655433322 2335777654444444433
No 32
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-70 Score=593.68 Aligned_cols=744 Identities=20% Similarity=0.237 Sum_probs=498.1
Q ss_pred HHHHhcCCCccCCCCCcHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCC-CCchhhHHHHHHHHHHHHHHHHHHH
Q 003313 48 VRLKFFGSNKLEKKPENKF----LKFLSFMWNPLSWVMETAALMAIALANGGGQ-GPDWQDSVGIVCLLIINSSISFIEE 122 (831)
Q Consensus 48 ~r~~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~l~i~ail~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~i~~~~~ 122 (831)
.++++|.+|.+...+++.+ ..+++||+.++++++++.++.+++.....+. ..+|...++++.+.++...++.+++
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r 153 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKR 153 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 4567788999988777643 5567889989999999888888875543333 2355555666666666777777777
Q ss_pred HHHHHHHHHHhccCCCeE-EEEECCEEEEEeCCCcCCCcEEEEcCCCccccceEEEecC----CeEEEcccccCCCcccc
Q 003313 123 SNAENATAALMAHLTPKT-KVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGD----PLKIDQSELTGESLTVT 197 (831)
Q Consensus 123 ~~~~~~~~~l~~~~~~~~-~V~rdg~~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~g~----~~~Vdes~LTGEs~pv~ 197 (831)
+++++..+ +... +.-|||...+ +++++++||+|.++.+++||||.++++.+ ++.+-+-.|+||+.-..
T Consensus 154 ~~rd~~~N------se~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKL 226 (1051)
T KOG0210|consen 154 RRRDRELN------SEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKL 226 (1051)
T ss_pred HHhhhhhh------hhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCccccee
Confidence 77665432 3333 3447775544 99999999999999999999999999643 58999999999996554
Q ss_pred ccC-----------------------------------------------CCeeeecceeee-----ccchhhhHHHhhh
Q 003313 198 KET-----------------------------------------------GDEVFSGLTCKH-----VHSFFGKAADLVD 225 (831)
Q Consensus 198 K~~-----------------------------------------------g~~v~aGt~v~~-----~~t~~g~~~~~~~ 225 (831)
|-| .|+++++|.+.+ ...+.|+.++.+.
T Consensus 227 rl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtRsvM 306 (1051)
T KOG0210|consen 227 RLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTRSVM 306 (1051)
T ss_pred eccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHHHHh
Confidence 432 245677766655 6778899888776
Q ss_pred ccC----ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhHhhHHH--------HHHHHHHH--HH------Hhh
Q 003313 226 STE----VVGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRDRIN--------MLSVTLAI--AS------YRL 285 (831)
Q Consensus 226 ~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--------~l~~~l~~--~~------~~l 285 (831)
++. +.+.++..+|.+.+++.+++++..++. ......+..|...+. ++|++|-. -+ ...
T Consensus 307 Nts~pr~KvGllelEiN~ltKiL~~~vlvLs~vm--v~~~g~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i 384 (1051)
T KOG0210|consen 307 NTSRPRSKVGLLELEINGLTKILFCFVLVLSIVM--VAMKGFGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIVYSWQI 384 (1051)
T ss_pred ccCCcccccceeeeecccHHHHHHHHHHHHHHHH--HHhhcCCCchHHHHHHHHHHHhhhceeEEEEehhHHHhhHhhhc
Confidence 653 445677778888887665554433321 111111222322211 33333211 11 111
Q ss_pred hc----CceEEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeecCCCCCh-------------------------
Q 003313 286 SQ----RGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDK------------------------- 336 (831)
Q Consensus 286 ~~----~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~------------------------- 336 (831)
.+ .|.++|+.+.-|+||+++++.+|||||||+|+|++++++.+....+.+.
T Consensus 385 ~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~ 464 (1051)
T KOG0210|consen 385 EHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALSR 464 (1051)
T ss_pred ccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccchh
Confidence 11 4789999999999999999999999999999999999887533211110
Q ss_pred ----------HHHHHHHHHhcccc-----------CCChHHHHHHHHhCC-----------------hHHHhhccceeEE
Q 003313 337 ----------DILVLLAARASRLE-----------NQDAIDAAIINMLAD-----------------PKEARANINEVHF 378 (831)
Q Consensus 337 ----------~~~l~~a~~~~~~~-----------~~~~~~~ai~~~~~~-----------------~~~~~~~~~~l~~ 378 (831)
+.+..+|.|++... ..+|.|.|+++.... +.....+|++++.
T Consensus 465 ~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~v 544 (1051)
T KOG0210|consen 465 VKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQV 544 (1051)
T ss_pred hcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeEEEEEE
Confidence 12233344433211 114556665543211 1112347999999
Q ss_pred ecCCCCCceEEEEEEcC-CCcEEEEEccchHHHhhhccCchhhHHHHHHHHHHHHhccCeeeeeeeecCCCCC-------
Q 003313 379 LPFNPVDKRTAITYTDS-EGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMT------- 450 (831)
Q Consensus 379 ~~f~s~~k~~sv~v~~~-~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~------- 450 (831)
+||+|+.|||.++|+++ .|+...+.|||+-.+-.+.+. .+.+++...+|+++|+|++.+|.|.+++++
T Consensus 545 FPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~----NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~ 620 (1051)
T KOG0210|consen 545 FPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY----NDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEA 620 (1051)
T ss_pred eccccccceeeEEEecCCCceEEEEEecchHHHhccccc----chhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHH
Confidence 99999999999999976 688899999999988777654 456778889999999999999999997653
Q ss_pred -------------------CCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC
Q 003313 451 -------------------EDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTN 511 (831)
Q Consensus 451 -------------------~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~ 511 (831)
+..+|.||.++|+.+.||+++++++.+++.||+|||++||+|||+.+||..+|+..++...
T Consensus 621 y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR 700 (1051)
T KOG0210|consen 621 YNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSR 700 (1051)
T ss_pred HHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceec
Confidence 1247899999999999999999999999999999999999999999999999999998653
Q ss_pred CCCCccc--------------------------cCCcCCCC---CcccHHHHHHhc--CcEEEeChHHHHHHHHHHhhc-
Q 003313 512 MYPSSLL--------------------------LGRDKDEN---EALPVDELIEKA--DGFTDVFAEHKYEIVKILQEK- 559 (831)
Q Consensus 512 ~~~~~~~--------------------------~~~~~~~~---~~~~~~~~~~~~--~v~~~~~P~~K~~iv~~l~~~- 559 (831)
...-+++ .|+.++-- .+.++.++..++ .++|||+|+||+++++.+|++
T Consensus 701 ~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t 780 (1051)
T KOG0210|consen 701 GQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKT 780 (1051)
T ss_pred CceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhh
Confidence 2211111 11111000 112334443333 479999999999999999984
Q ss_pred CCEEEEEcCCccChhhhccCCeeEEe-cCchHHHhhhcCEEEeCCChhHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHH
Q 003313 560 KHVVGMTGDGVNDAPALKKADIGIAV-AGATEAARGAADIVLTEPGLSVICSAV-LTSRTVFQIMKNCMIHAVSITIHIV 637 (831)
Q Consensus 560 g~~v~~iGDG~ND~~al~~AdvgIa~-~~~~~~a~~aadivl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~l~~ni~~~ 637 (831)
|..|+++|||.||++|+++||+||++ |+....|.-|||+.+.+ |+.+-+++ -+||..|+|-.+.-+|.+=....+.
T Consensus 781 ~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItq--F~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is 858 (1051)
T KOG0210|consen 781 GKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQ--FSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIIS 858 (1051)
T ss_pred CceEEEEcCCCccchheeecccceeeecccccccchhccccHHH--HHHHHHHhhccccchHHHHHHHHHHHHhhhHHHH
Confidence 89999999999999999999999999 54445566799999965 99999987 6799999999998888655444333
Q ss_pred HHHHHHHHhccCCCChH-------HHHHHHHhhccchhccccCCCCCC------------C-CCCccchHHHHHHHHHHH
Q 003313 638 LSFVLLALIWEYDFPPF-------MVLIIAVLNDGTIITISKGRVKSS------------L-RPDGWKLNEIFAAGIVIG 697 (831)
Q Consensus 638 ~~~~~~~~~~~~~~~~~-------~~l~~~~~~~~~~~~l~~~~~~~~------------~-~~~~~~~~~~~~~~~~~g 697 (831)
.+..++... +.|.|+ .+.+..+-+-+|.+++..|+.-.+ . ..+.+..+.+ ..+++.+
T Consensus 859 ~~Qavfs~v--~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF-~iwvLIS 935 (1051)
T KOG0210|consen 859 TMQAVFSSV--FYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYKTF-FIWVLIS 935 (1051)
T ss_pred HHHHHHHHH--hhhcchHHhhhhHHHHHHHHHHHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchhhh-hhhhhHH
Confidence 222222111 122222 233444444445567766654322 1 1122233444 4445558
Q ss_pred HHHHHHHHHHHHHHHhhhccccccccccCCCcHHHHHHHHHHHHHHHHHHH-hhhhccCCCCCCcCchHHHHHHHHHHHH
Q 003313 698 NYLALVTILFYWVVVHTDFFETHFHVRSLSSNTEEISSAVHLQVSIISQAL-IFVTRSQSWSFLERPGALLMCAFVLAQL 776 (831)
Q Consensus 698 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~l~~~~~~~~~ 776 (831)
++++.+....+++.+.+.+ -...++.|.++++....+ ++.+++|.| .++++-++++.
T Consensus 936 iYQG~vim~g~~~l~~~ef--------------~~ivaisFtaLi~tELiMVaLtv~tw~~--------~m~vae~lsL~ 993 (1051)
T KOG0210|consen 936 IYQGSVIMYGALLLFDTEF--------------IHIVAISFTALILTELIMVALTVRTWHW--------LMVVAELLSLA 993 (1051)
T ss_pred HHcccHHHHHHHHHhhhhh--------------eEeeeeeeHHHHHHHHHHHhhhhhhhhH--------HHHHHHHHHHH
Confidence 8888877765444443222 123467788888888876 455566433 34445444443
Q ss_pred HHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCC
Q 003313 777 VATLIAVYAHISFAYISGIGWGWAGVIWLYSLVFYILLDIIKFTVRTLSREAWNQ 831 (831)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~k~~~r~~~~~~w~~ 831 (831)
+-.+...+....+-.-.-.+|.+.+-+.++.++.+++..+.|.+.|.++||+|.|
T Consensus 994 ~Yivsl~~l~~yfd~~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpSYaK 1048 (1051)
T KOG0210|consen 994 LYIVSLAFLHEYFDRYFILTYVFLWKVTVITLVSCLPLYFIKALRRKLSPPSYAK 1048 (1051)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhh
Confidence 3222211111001111112444444445566667777788999999999999876
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.1e-61 Score=508.00 Aligned_cols=497 Identities=23% Similarity=0.331 Sum_probs=375.7
Q ss_pred HHHhHHHHHHHHHHHHHHHHh----cCCCCCCchhhHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhccC-CCeEEE
Q 003313 72 FMWNPLSWVMETAALMAIALA----NGGGQGPDWQDSVGIVCL----LIINSSISFIEESNAENATAALMAHL-TPKTKV 142 (831)
Q Consensus 72 ~~~~~~~~~l~i~ail~~~~~----~~~~~~~~~~~~~~i~~~----~~~~~~i~~~~~~~~~~~~~~l~~~~-~~~~~V 142 (831)
+.+||..++.++.++++.++. ..++...+......+.++ +++...-+.+.|-|.+.+.++|++.. ...+++
T Consensus 29 ~~kNPVMFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~ 108 (681)
T COG2216 29 LVKNPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARL 108 (681)
T ss_pred hhhCCeEEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHH
Confidence 467888777777776666332 122211222222222222 33344445566666655556665533 235666
Q ss_pred EEC-CEEEEEeCCCcCCCcEEEEcCCCccccceEEEecCCeEEEcccccCCCccccccCC---Ceeeecceeee------
Q 003313 143 LRD-GQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKETG---DEVFSGLTCKH------ 212 (831)
Q Consensus 143 ~rd-g~~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~g~~~~Vdes~LTGEs~pv~K~~g---~~v~aGt~v~~------ 212 (831)
+++ |.++.+++.+|+.||+|.|++||.||+||.+++| ...||||++||||.||-|.+| +.|-.||.+.+
T Consensus 109 l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG-~asVdESAITGESaPViresGgD~ssVtGgT~v~SD~l~ir 187 (681)
T COG2216 109 LRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIR 187 (681)
T ss_pred hcCCCCeeeccccccccCCEEEEecCCCccCCCeEEee-eeecchhhccCCCcceeeccCCCcccccCCcEEeeeeEEEE
Confidence 665 8999999999999999999999999999999999 689999999999999999998 67999999887
Q ss_pred -----ccchhhhHHHhhhccC-ccCcHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhchhhHh----hHHH--HHHHH--
Q 003313 213 -----VHSFFGKAADLVDSTE-VVGHFQQVLTSIGNFC-ICFITVGMILEIIVMFPIQHRLYR----DRIN--MLSVT-- 277 (831)
Q Consensus 213 -----~~t~~g~~~~~~~~~~-~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~l~--~l~~~-- 277 (831)
..|.+.|+..+++.++ +++|-+-.++-+..-+ ++++++...+.-+..|. ...... .++. .++.+
T Consensus 188 ita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliFL~~~~Tl~p~a~y~-~g~~~~i~~LiALlV~LIPTTIG 266 (681)
T COG2216 188 ITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIFLLAVATLYPFAIYS-GGGAASVTVLVALLVCLIPTTIG 266 (681)
T ss_pred EEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHHHHHHHhhhhHHHHc-CCCCcCHHHHHHHHHHHhcccHH
Confidence 6788999999998874 7788665544432211 11111101100011111 011111 1111 11111
Q ss_pred ------HHHHHHhhhcCceEEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeecCCCCChHHHHHHHHHhccccC
Q 003313 278 ------LAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLEN 351 (831)
Q Consensus 278 ------l~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~ 351 (831)
=-.|+.|+.+.|++-++..++|.+|.+|++..|||||+|.|+-.-.+++ ...+.+.+++...|..++-..+
T Consensus 267 gLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~---p~~gv~~~~la~aa~lsSl~De 343 (681)
T COG2216 267 GLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFI---PVPGVSEEELADAAQLASLADE 343 (681)
T ss_pred HHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhhee---cCCCCCHHHHHHHHHHhhhccC
Confidence 1126789999999999999999999999999999999999987777766 3567888888887776665433
Q ss_pred CChHHHHHHHHhCChH-HHh-hccc-eeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccCchh-hHHHHHHH
Q 003313 352 QDAIDAAIINMLADPK-EAR-ANIN-EVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQEKEE-IGGKVHEI 427 (831)
Q Consensus 352 ~~~~~~ai~~~~~~~~-~~~-~~~~-~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~~~~-~~~~~~~~ 427 (831)
.|--++++..+.+.. +.+ +... ...+.||+.+.+++.+-. +++ ..+.|||.+.+.+..++... .++.++..
T Consensus 344 -TpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~~~~g~~p~~l~~~ 418 (681)
T COG2216 344 -TPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVRERGGHIPEDLDAA 418 (681)
T ss_pred -CCCcccHHHHHHHhccCCCcccccccceeeecceecccccccC--CCC--ceeecccHHHHHHHHHhcCCCCCHHHHHH
Confidence 566677777654221 111 1111 357899998777665432 233 56789999999987764433 78889999
Q ss_pred HHHHHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhC
Q 003313 428 INKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLG 507 (831)
Q Consensus 428 ~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~g 507 (831)
.++.++.|-+.++++.++ +++|++.++|-+||+.+|-+.+||+.||+.+|+||||+.||..||++.|
T Consensus 419 ~~~vs~~GGTPL~V~~~~-------------~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAG 485 (681)
T COG2216 419 VDEVSRLGGTPLVVVENG-------------RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAG 485 (681)
T ss_pred HHHHHhcCCCceEEEECC-------------EEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhC
Confidence 999999999999999877 8999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecC
Q 003313 508 IGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAG 587 (831)
Q Consensus 508 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~ 587 (831)
++. ..++++||+|.++++.-|.+|+.|+|+|||+||+|||.+||||+||.+
T Consensus 486 VDd-----------------------------fiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMNs 536 (681)
T COG2216 486 VDD-----------------------------FIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNS 536 (681)
T ss_pred chh-----------------------------hhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhcc
Confidence 963 589999999999999999999999999999999999999999999999
Q ss_pred chHHHhhhcCEEEeCCChhHHHHHHHHhHHHHH
Q 003313 588 ATEAARGAADIVLTEPGLSVICSAVLTSRTVFQ 620 (831)
Q Consensus 588 ~~~~a~~aadivl~~~~~~~i~~~i~~gR~~~~ 620 (831)
|+++|||++.+|=+|.|...+.+.++.|++..-
T Consensus 537 GTqAAkEAaNMVDLDS~PTKlievV~IGKqlLi 569 (681)
T COG2216 537 GTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLI 569 (681)
T ss_pred ccHHHHHhhcccccCCCccceehHhhhhhhhee
Confidence 999999999999999999999999999998653
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=99.95 E-value=4.3e-27 Score=244.86 Aligned_cols=193 Identities=34% Similarity=0.514 Sum_probs=156.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCe-EEEEECCEEEEEeCCCcCCCcEEEEcCCCccccceEEEe-cCCeEE
Q 003313 107 IVCLLIINSSISFIEESNAENATAALMAHLTPK-TKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLE-GDPLKI 184 (831)
Q Consensus 107 i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~-~~V~rdg~~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~-g~~~~V 184 (831)
++++++++.+++.++++|+++..+++++..+++ ++|.|||++++++++||+|||+|.+++||++||||++++ | .+.|
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g-~~~v 80 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESG-SAYV 80 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESS-EEEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceecc-cccc
Confidence 567788889999999999999999998888887 999999999999999999999999999999999999999 7 8999
Q ss_pred EcccccCCCcccccc-----CCCeeeecceeee-----------ccchhhhHHHhhhccC-ccCcHHHHHHHHHHHHHHH
Q 003313 185 DQSELTGESLTVTKE-----TGDEVFSGLTCKH-----------VHSFFGKAADLVDSTE-VVGHFQQVLTSIGNFCICF 247 (831)
Q Consensus 185 des~LTGEs~pv~K~-----~g~~v~aGt~v~~-----------~~t~~g~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~ 247 (831)
|||.+|||+.|+.|. .|+.+|+||.+.+ .+|..|++.+.....+ +++++++.++++..++..+
T Consensus 81 d~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (230)
T PF00122_consen 81 DESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIII 160 (230)
T ss_dssp ECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhc
Confidence 999999999999999 9999999999887 6788888888886665 5689999999998886554
Q ss_pred HHHHHHHHHHHHhh-hchhhH----hhHHH------------HHHHHHHHHHHhhhcCceEEccchhhhh
Q 003313 248 ITVGMILEIIVMFP-IQHRLY----RDRIN------------MLSVTLAIASYRLSQRGAITKRMTAIEE 300 (831)
Q Consensus 248 ~~~~~~~~~~~~~~-~~~~~~----~~~l~------------~l~~~l~~~~~~l~~~~ilvk~~~~le~ 300 (831)
+++..++.+++++. .....+ ...+. .+++++.+++.+|+++|+++|+++++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 161 ILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred ccccchhhhccceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 44433333322222 011111 11111 4566778899999999999999999995
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.92 E-value=1.3e-25 Score=231.01 Aligned_cols=211 Identities=29% Similarity=0.372 Sum_probs=152.6
Q ss_pred ceEEEecCCCccccCceEEEEEeeeecCCCCChHHHHHHHHHhccccCCChHHHHHHHHhCChHHHhhccceeEEecCCC
Q 003313 304 MDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNP 383 (831)
Q Consensus 304 v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~f~s 383 (831)
|++||||||||||+|++.+ . . .+.+.++..+...+..++ ||+..++..+....... .... +|..
T Consensus 1 i~~i~fDktGTLt~~~~~v---~---~---~~~~~~~~~~~~~~~~s~-~p~~~~~~~~~~~~~~~-~~~~-----~~~~ 64 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV---A---P---PSNEAALAIAAALEQGSE-HPIGKAIVEFAKNHQWS-KSLE-----SFSE 64 (215)
T ss_dssp ESEEEEECCTTTBESHHEE---E---S---CSHHHHHHHHHHHHCTST-SHHHHHHHHHHHHHHHH-SCCE-----EEEE
T ss_pred CeEEEEecCCCcccCeEEE---E---e---ccHHHHHHHHHHhhhcCC-Ccchhhhhhhhhhccch-hhhh-----hhee
Confidence 6899999999999999999 1 1 456666666666555555 99999998876542211 1111 1111
Q ss_pred CCceEEEEEEcCCCcEEEEEccchHHHhhhccCchhhHHHHHHHHHHHHhccCeeeeeeeecCCCCCCCCCCCCceeeee
Q 003313 384 VDKRTAITYTDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGL 463 (831)
Q Consensus 384 ~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~ 463 (831)
...++.... .++. +. |+++.+....... ............+|.+.+.++.. .+++|.
T Consensus 65 ~~~~~~~~~--~~~~---~~-g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 121 (215)
T PF00702_consen 65 FIGRGISGD--VDGI---YL-GSPEWIHELGIRV----ISPDLVEEIQESQGRTVIVLAVN-------------LIFLGL 121 (215)
T ss_dssp ETTTEEEEE--EHCH---EE-HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHCEEEEES-------------HEEEEE
T ss_pred eeecccccc--cccc---cc-ccchhhhhccccc----cccchhhhHHHhhCCcccceeec-------------CeEEEE
Confidence 111111111 1122 22 8888876644321 11112222334566666666653 389999
Q ss_pred ccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEE
Q 003313 464 LPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTD 543 (831)
Q Consensus 464 i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 543 (831)
+.+.|++|++++++|++|+++|++++|+|||+..++..+++++||... .+|++
T Consensus 122 ~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~---------------------------~v~a~ 174 (215)
T PF00702_consen 122 FGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDS---------------------------IVFAR 174 (215)
T ss_dssp EEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSE---------------------------EEEES
T ss_pred EeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccccc---------------------------ccccc
Confidence 999999999999999999999999999999999999999999999421 27999
Q ss_pred e--ChHHH--HHHHHHHhhcCCEEEEEcCCccChhhhccCC
Q 003313 544 V--FAEHK--YEIVKILQEKKHVVGMTGDGVNDAPALKKAD 580 (831)
Q Consensus 544 ~--~P~~K--~~iv~~l~~~g~~v~~iGDG~ND~~al~~Ad 580 (831)
+ +|++| .++++.+|.+++.|+|+|||.||++|+++||
T Consensus 175 ~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 175 VIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred ccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 9 99999 9999999977779999999999999999997
No 36
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.61 E-value=2.6e-15 Score=132.84 Aligned_cols=122 Identities=27% Similarity=0.333 Sum_probs=107.9
Q ss_pred eeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhc
Q 003313 459 SFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKA 538 (831)
Q Consensus 459 ~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (831)
...+.++---++=++++++|++|++. +++++.|||...+....|+..|++..
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 56778888888899999999999999 99999999999999999999998642
Q ss_pred CcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEe-c--CchHHHhhhcCEEEeCCChhHHHH
Q 003313 539 DGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV-A--GATEAARGAADIVLTEPGLSVICS 610 (831)
Q Consensus 539 ~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~-~--~~~~~a~~aadivl~~~~~~~i~~ 610 (831)
++|+...|+.|.++++.|+++++.|.|+|||.||.+||++||+||.. + +.++.+.++||+++.+ ...+++
T Consensus 72 rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ld 144 (152)
T COG4087 72 RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILD 144 (152)
T ss_pred eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHH
Confidence 47999999999999999999999999999999999999999999987 3 6677788999999843 444443
No 37
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.60 E-value=1.5e-12 Score=142.77 Aligned_cols=210 Identities=20% Similarity=0.235 Sum_probs=152.2
Q ss_pred CceeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCC------CccccCCc--------
Q 003313 457 PRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYP------SSLLLGRD-------- 522 (831)
Q Consensus 457 ~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~------~~~~~~~~-------- 522 (831)
+-.|+|++....+.|++....|+.|.++-|+.+-.|-.+....+-.|+++||...... .+...|.+
T Consensus 814 GQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~ 893 (1354)
T KOG4383|consen 814 GQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQF 893 (1354)
T ss_pred cchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhh
Confidence 4579999999999999999999999999999999999999999999999999652110 00000000
Q ss_pred ---------------CCCC----------------------------C-----------------cccHHHHHHhcCcEE
Q 003313 523 ---------------KDEN----------------------------E-----------------ALPVDELIEKADGFT 542 (831)
Q Consensus 523 ---------------~~~~----------------------------~-----------------~~~~~~~~~~~~v~~ 542 (831)
.++. + .++++++..-+..|.
T Consensus 894 a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFT 973 (1354)
T KOG4383|consen 894 AAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFT 973 (1354)
T ss_pred hccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeecc
Confidence 0000 0 001222222234699
Q ss_pred EeChHHHHHHHHHHhhcCCEEEEEcCCcc--ChhhhccCCeeEEecC-------------chHH--Hh------------
Q 003313 543 DVFAEHKYEIVKILQEKKHVVGMTGDGVN--DAPALKKADIGIAVAG-------------ATEA--AR------------ 593 (831)
Q Consensus 543 ~~~P~~K~~iv~~l~~~g~~v~~iGDG~N--D~~al~~AdvgIa~~~-------------~~~~--a~------------ 593 (831)
+++|+.-.++++.+|+.|++|+++|...| ..-.+-+||++||+.. ++.. |+
T Consensus 974 DcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSg 1053 (1354)
T KOG4383|consen 974 DCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISG 1053 (1354)
T ss_pred CCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeecc
Confidence 99999999999999999999999999888 4445679999999841 1111 11
Q ss_pred ----hhcCEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhccCCCChHHHHHHHHhhccc
Q 003313 594 ----GAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFV-LLALIWEYDFPPFMVLIIAVLNDGT 666 (831)
Q Consensus 594 ----~aadivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~ 666 (831)
-++|+.+.....-++.++|+-+|....-+|+++.|.+.......+..+ -.+++.|..|+.-+++|...+.-.+
T Consensus 1054 qLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~Pl 1131 (1354)
T KOG4383|consen 1054 QLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPL 1131 (1354)
T ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHH
Confidence 124444544556678889999999999999999999988775544443 4556677888888999998887543
No 38
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=99.37 E-value=1.1e-12 Score=108.61 Aligned_cols=67 Identities=36% Similarity=0.536 Sum_probs=61.4
Q ss_pred cccCCHHHHHHHhCCC-CCCCCHHHHHHHHHhcCCCccCC-CCCcHHHHHHHHHHhHHHHHHHHHHHHH
Q 003313 22 LARLPLDEVFGQLGTT-RQGLSSEDAEVRLKFFGSNKLEK-KPENKFLKFLSFMWNPLSWVMETAALMA 88 (831)
Q Consensus 22 ~~~~~~~~~~~~l~~~-~~GLs~~~~~~r~~~~G~N~i~~-~~~~~~~~~~~~~~~~~~~~l~i~ail~ 88 (831)
||.++++++++.|+++ .+|||++|+++|+++||+|+++. ++++.|+.|+++|++|+.++|++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 7999999999999976 89999999999999999999965 5678899999999999999999999886
No 39
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=99.34 E-value=2.7e-11 Score=121.15 Aligned_cols=166 Identities=14% Similarity=0.146 Sum_probs=114.4
Q ss_pred cCCCChHHHHHHHHhhccc-hhccccCCCCCC-----CCCC--ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 003313 648 EYDFPPFMVLIIAVLNDGT-IITISKGRVKSS-----LRPD--GWKLNEIFAAGIVIGNYLALVTILFYWVVVHTDFFET 719 (831)
Q Consensus 648 ~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~-----~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 719 (831)
|.|++|+|++|+|+++|.+ ++++++|+++++ ||++ +...++++...+..|++++++++..|++....
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~----- 75 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYI----- 75 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHS-----
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhc-----
Confidence 5789999999999999998 699999988764 2211 22246677778999999999999888766531
Q ss_pred cccccc--CCCcHHHHHHHHHHHHHHHHHHHhhhhccCCCC-CC--c-CchHHHHHHHHHHHHHHHHHHHhhh--ccccc
Q 003313 720 HFHVRS--LSSNTEEISSAVHLQVSIISQALIFVTRSQSWS-FL--E-RPGALLMCAFVLAQLVATLIAVYAH--ISFAY 791 (831)
Q Consensus 720 ~~~~~~--~~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~-~~--~-~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~ 791 (831)
+|... ...+...++|++|.+++++|.++++.+|+.+.+ +. + ..|++++.+++++.++..++ .|.+ -..++
T Consensus 76 -~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i-~~~P~~~~~f~ 153 (182)
T PF00689_consen 76 -FGWDEETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILI-VYVPGLNRIFG 153 (182)
T ss_dssp -TCSSSHHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHH-HHSTTHHHHST
T ss_pred -cccccccchhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHHH-hcchhhHhhhc
Confidence 12110 011245689999999999999999999996532 22 1 13556666666666554444 5543 33577
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 003313 792 ISGIGWGWAGVIWLYSLVFYILLDIIKFT 820 (831)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~e~~k~~ 820 (831)
+.++++.+|+.+++.+++.++++|++|++
T Consensus 154 ~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 154 TAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp ----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 88888888888899999999999999985
No 40
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.08 E-value=5.1e-10 Score=119.48 Aligned_cols=66 Identities=26% Similarity=0.238 Sum_probs=57.9
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 548 HKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 548 ~K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
.|..-++.+.+. .+.|+++|||.||.+||+.|++|+||+||.+.+|++||+|+.+++-+++.++|+
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHH
Confidence 466666666543 356999999999999999999999999999999999999999999999998885
No 41
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.04 E-value=1.2e-09 Score=116.07 Aligned_cols=153 Identities=24% Similarity=0.236 Sum_probs=107.7
Q ss_pred eeccccCC-CCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC---------CCccccCCcC--------
Q 003313 462 GLLPLFDP-PRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMY---------PSSLLLGRDK-------- 523 (831)
Q Consensus 462 G~i~~~D~-lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~---------~~~~~~~~~~-------- 523 (831)
|.+.-.|. +.+.+.++|+++++.|++++++||++...+..+.+++|+..... ..+.+....+
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 33444444 88999999999999999999999999999999999999974110 0000000000
Q ss_pred ----------------------------------------------CCCC----------cccHHHH---HHh-----cC
Q 003313 524 ----------------------------------------------DENE----------ALPVDEL---IEK-----AD 539 (831)
Q Consensus 524 ----------------------------------------------~~~~----------~~~~~~~---~~~-----~~ 539 (831)
.... .+.+.+. +.+ ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 0000 0111111 111 01
Q ss_pred cE-------EEeChH--HHHHHHHHHhh-cCC---EEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChh
Q 003313 540 GF-------TDVFAE--HKYEIVKILQE-KKH---VVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLS 606 (831)
Q Consensus 540 v~-------~~~~P~--~K~~iv~~l~~-~g~---~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~ 606 (831)
.+ ..+.|. +|..-++.+.+ .|- .|+++||+.||.+||+.|+.||||+||++.+|+.||++...++-+
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~ 251 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDED 251 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccch
Confidence 11 333443 68888877766 343 499999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 003313 607 VICSAVLT 614 (831)
Q Consensus 607 ~i~~~i~~ 614 (831)
+|.+++++
T Consensus 252 Gv~~~l~~ 259 (264)
T COG0561 252 GVAEALEK 259 (264)
T ss_pred HHHHHHHH
Confidence 99998864
No 42
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.04 E-value=1.6e-09 Score=112.71 Aligned_cols=151 Identities=25% Similarity=0.270 Sum_probs=105.3
Q ss_pred eccccCC-CCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC--CCccc---------cCCcCC------
Q 003313 463 LLPLFDP-PRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMY--PSSLL---------LGRDKD------ 524 (831)
Q Consensus 463 ~i~~~D~-lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~--~~~~~---------~~~~~~------ 524 (831)
.+.-.|. +.+.+.++|+++++.|++++++||++...+..+.+++|+..... ++..+ ....++
T Consensus 13 TLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~ 92 (230)
T PRK01158 13 TITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAY 92 (230)
T ss_pred CcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHH
Confidence 3333444 77899999999999999999999999999999999999864211 01100 000000
Q ss_pred ---------------C---------------CCcccHHHHHHhcC--c-------EEEeChH--HHHHHHHHHhhc----
Q 003313 525 ---------------E---------------NEALPVDELIEKAD--G-------FTDVFAE--HKYEIVKILQEK---- 559 (831)
Q Consensus 525 ---------------~---------------~~~~~~~~~~~~~~--v-------~~~~~P~--~K~~iv~~l~~~---- 559 (831)
. ...+++.+.+++.. + +....|. .|..-++.+.+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~ 172 (230)
T PRK01158 93 SELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGID 172 (230)
T ss_pred HHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCC
Confidence 0 00011222222211 1 1233333 377777666553
Q ss_pred CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 560 KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 560 g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
...++++||+.||.+|++.|++|+||+|+.+.+|+.||+|+.+++-+++.++++
T Consensus 173 ~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 173 PEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred HHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 356999999999999999999999999999999999999999999999998875
No 43
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.04 E-value=6.4e-10 Score=118.83 Aligned_cols=145 Identities=15% Similarity=0.147 Sum_probs=100.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC--CC--------ccccCCcCC--------------
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMY--PS--------SLLLGRDKD-------------- 524 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~--~~--------~~~~~~~~~-------------- 524 (831)
.+.+.+.++|++++++|++++++||++...+..+.+++|+..... ++ +.+....++
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 98 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWDT 98 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhhc
Confidence 588899999999999999999999999999999999999853210 00 000000000
Q ss_pred --------------------------------------CC------------CcccHHH---HHHh-----cCc------
Q 003313 525 --------------------------------------EN------------EALPVDE---LIEK-----ADG------ 540 (831)
Q Consensus 525 --------------------------------------~~------------~~~~~~~---~~~~-----~~v------ 540 (831)
.. +.+.+++ .+.+ ..+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~ 178 (272)
T PRK15126 99 RASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSATD 178 (272)
T ss_pred CcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 00 0000011 1110 000
Q ss_pred EEEeChH--HHHHHHHHHhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCE--EEeCCChhHHHHHH
Q 003313 541 FTDVFAE--HKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADI--VLTEPGLSVICSAV 612 (831)
Q Consensus 541 ~~~~~P~--~K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadi--vl~~~~~~~i~~~i 612 (831)
+..++|. .|..-++.+.+. .+.|+++|||.||.+||+.|+.||||+||.+.+|++||. |+.+++-+++.++|
T Consensus 179 ~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l 258 (272)
T PRK15126 179 CLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYL 258 (272)
T ss_pred EEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHH
Confidence 1233333 487777777653 357999999999999999999999999999999999996 77788889998887
Q ss_pred H
Q 003313 613 L 613 (831)
Q Consensus 613 ~ 613 (831)
+
T Consensus 259 ~ 259 (272)
T PRK15126 259 T 259 (272)
T ss_pred H
Confidence 5
No 44
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=99.03 E-value=7.4e-10 Score=90.18 Aligned_cols=60 Identities=37% Similarity=0.607 Sum_probs=53.5
Q ss_pred HhCCC-CCCCCHHHHHHHHHhcCCCccCCCC-CcHHHHHHHHHHhHHHHHHHHHHHHHHHHh
Q 003313 33 QLGTT-RQGLSSEDAEVRLKFFGSNKLEKKP-ENKFLKFLSFMWNPLSWVMETAALMAIALA 92 (831)
Q Consensus 33 ~l~~~-~~GLs~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~i~ail~~~~~ 92 (831)
.++++ .+|||++|+++|+++||+|+++.++ .++|+.++++|++|+.++++++++++++++
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 35666 4599999999999999999998875 788999999999999999999999998863
No 45
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.01 E-value=1.2e-09 Score=112.42 Aligned_cols=143 Identities=21% Similarity=0.252 Sum_probs=101.1
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC--CCccccCCc------------------------
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMY--PSSLLLGRD------------------------ 522 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~--~~~~~~~~~------------------------ 522 (831)
++.+++.++|++|++.|++++++||++...+..+++++++..... ++..+...+
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 478899999999999999999999999999999999999864211 111110000
Q ss_pred --CC-C------------CCcccHHHHHHhcCc-------EEEeCh--HHHHHHHHHHhhc----CCEEEEEcCCccChh
Q 003313 523 --KD-E------------NEALPVDELIEKADG-------FTDVFA--EHKYEIVKILQEK----KHVVGMTGDGVNDAP 574 (831)
Q Consensus 523 --~~-~------------~~~~~~~~~~~~~~v-------~~~~~P--~~K~~iv~~l~~~----g~~v~~iGDG~ND~~ 574 (831)
.. . ...+.+.+.+.+..+ +..++| .+|...++.+.+. ...++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 00 0 000112222222111 123333 3688888777653 345999999999999
Q ss_pred hhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHH
Q 003313 575 ALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSA 611 (831)
Q Consensus 575 al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~ 611 (831)
|++.|++|+||++|.+.+|+.||+|+.+++-+++.++
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhh
Confidence 9999999999999999999999999988888887765
No 46
>PRK10976 putative hydrolase; Provisional
Probab=98.99 E-value=1.7e-09 Score=115.08 Aligned_cols=66 Identities=20% Similarity=0.165 Sum_probs=56.7
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcC--EEEeCCChhHHHHHHH
Q 003313 548 HKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAAD--IVLTEPGLSVICSAVL 613 (831)
Q Consensus 548 ~K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aad--ivl~~~~~~~i~~~i~ 613 (831)
.|..-++.+.+. .+.|+++|||.||.+||+.|+.|+||+||.+.+|+.|| .|+.+++-+++.++++
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 477666666543 35699999999999999999999999999999999988 7888888999998885
No 47
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.96 E-value=2.3e-09 Score=115.95 Aligned_cols=127 Identities=21% Similarity=0.237 Sum_probs=98.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCC-----CccccCCcCCCCCcccHHHHHHhcCcEEE
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYP-----SSLLLGRDKDENEALPVDELIEKADGFTD 543 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 543 (831)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+.....+ ...+.+.... .-
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g-----------------~i 243 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLG-----------------DI 243 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecC-----------------cc
Confidence 5789999999999999999999999998888899999998531110 0000000000 00
Q ss_pred eChHHHHHHHHHHhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 544 VFAEHKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 544 ~~P~~K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
+..+.|.+.++.+.++ .+.+.++|||.||.+|++.|++|||| ++.+..++.||.++..++++++..++-
T Consensus 244 v~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 244 VDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred CCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 2235788888777653 35799999999999999999999999 889999999999999999998887653
No 48
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.96 E-value=3.9e-09 Score=106.92 Aligned_cols=130 Identities=15% Similarity=0.106 Sum_probs=96.8
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccC-CcCCCCCcccHHHHHHhcCcEEEeChH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLG-RDKDENEALPVDELIEKADGFTDVFAE 547 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~P~ 547 (831)
+++|++.+.|+.+++.| ++.++||-....+..+++++|+.....+.-.+.+ ... +. .....++
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~---tG------------~~~~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRV---VG------------YQLRQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCee---EC------------eeecCcc
Confidence 68999999999999975 9999999999999999999999632111101100 000 00 0113577
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHHHh
Q 003313 548 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTS 615 (831)
Q Consensus 548 ~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~~g 615 (831)
+|...++.+++.|..+.++|||.||.+|++.||+||++.....+.+++-|+-.. .+.+.+..++.++
T Consensus 132 ~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~~-~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCcc-cCHHHHHHHHHHH
Confidence 899999999888888999999999999999999999998665555555555544 4577777777654
No 49
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.95 E-value=4.6e-09 Score=108.80 Aligned_cols=145 Identities=21% Similarity=0.221 Sum_probs=100.8
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC--CCccccC---------CcCC-------------
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMY--PSSLLLG---------RDKD------------- 524 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~--~~~~~~~---------~~~~------------- 524 (831)
.+.+.+.++|+++++.|++++++||++...+..+.+++|+..... +...+.. ...+
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 477889999999999999999999999999999999999643110 0000000 0000
Q ss_pred -----------C---------CCcccHHHHHHhcC---------cEEEeCh--HHHHHHHHHHhhc----CCEEEEEcCC
Q 003313 525 -----------E---------NEALPVDELIEKAD---------GFTDVFA--EHKYEIVKILQEK----KHVVGMTGDG 569 (831)
Q Consensus 525 -----------~---------~~~~~~~~~~~~~~---------v~~~~~P--~~K~~iv~~l~~~----g~~v~~iGDG 569 (831)
. .+.+.......+.. .+..+.| .+|..-++.+.++ .+.++++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0 00011112222211 1223333 3687777777553 3579999999
Q ss_pred ccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhH----HHHHHH
Q 003313 570 VNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSV----ICSAVL 613 (831)
Q Consensus 570 ~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~----i~~~i~ 613 (831)
.||.+|++.|++|+||+|+.+.+|+.||.|..+++-.+ +.++++
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999999999999999998888888 666553
No 50
>PLN02887 hydrolase family protein
Probab=98.93 E-value=3.9e-09 Score=122.09 Aligned_cols=65 Identities=26% Similarity=0.372 Sum_probs=55.7
Q ss_pred HHHHHHHHhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 549 KYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 549 K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
|..-++.+.+. .+.|+++|||.||.+||+.|+.|||||||.+.+|++||+|+.+++-++|.++|+
T Consensus 508 KG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 508 KGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 55555555442 246999999999999999999999999999999999999999999999998886
No 51
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.90 E-value=7.3e-09 Score=110.63 Aligned_cols=66 Identities=26% Similarity=0.338 Sum_probs=56.3
Q ss_pred HHHHHHHHHhhc-C---CEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 548 HKYEIVKILQEK-K---HVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 548 ~K~~iv~~l~~~-g---~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
+|...++.+.++ | +.++++||+.||.+|++.|++|+|||++.+..|+.||+|+.+++-+++.++++
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 466655555432 2 46999999999999999999999999999999999999999999999998885
No 52
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.89 E-value=5.7e-09 Score=102.08 Aligned_cols=104 Identities=19% Similarity=0.191 Sum_probs=84.0
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEe--ChHHHHHHH
Q 003313 476 DTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDV--FAEHKYEIV 553 (831)
Q Consensus 476 ~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~P~~K~~iv 553 (831)
.+|+.|+++|+++.++|+.+...+....+.+|+.. .|... .|+.-..++
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~-----------------------------~f~~~kpkp~~~~~~~ 91 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR-----------------------------FHEGIKKKTEPYAQML 91 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE-----------------------------EEecCCCCHHHHHHHH
Confidence 57999999999999999999999999999999852 11111 234444555
Q ss_pred HHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHH
Q 003313 554 KILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVI 608 (831)
Q Consensus 554 ~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i 608 (831)
+.++-..+.++++||+.||.+|++.|++++||+++.+.+++.|++|+..++-.+.
T Consensus 92 ~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~~~g~ 146 (169)
T TIGR02726 92 EEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARGGHGA 146 (169)
T ss_pred HHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCCCCCH
Confidence 5554445679999999999999999999999999999999999999876654443
No 53
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.87 E-value=5.7e-09 Score=109.57 Aligned_cols=146 Identities=20% Similarity=0.243 Sum_probs=101.7
Q ss_pred cCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC--CCccc--------cCCcCCC-----------
Q 003313 467 FDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMY--PSSLL--------LGRDKDE----------- 525 (831)
Q Consensus 467 ~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~--~~~~~--------~~~~~~~----------- 525 (831)
...+.+++.+++++++++|+++++.||+....+..+.+++++..... ++..+ ....++.
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 34577899999999999999999999999999999999999863110 00000 0000000
Q ss_pred ------------------C-------------------------------------CcccHHHH-------HHhc-----
Q 003313 526 ------------------N-------------------------------------EALPVDEL-------IEKA----- 538 (831)
Q Consensus 526 ------------------~-------------------------------------~~~~~~~~-------~~~~----- 538 (831)
. +.+.++.+ ....
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 0 00011111 1110
Q ss_pred --CcEEEeCh--HHHHHHHHHHhh----cCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHH
Q 003313 539 --DGFTDVFA--EHKYEIVKILQE----KKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICS 610 (831)
Q Consensus 539 --~v~~~~~P--~~K~~iv~~l~~----~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~ 610 (831)
.-+..++| ..|..-++.+.+ ..+.++++||+.||.+||+.|+.|+||+++++..++.||.++...+-.++.+
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~ 252 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAK 252 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHH
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHH
Confidence 11233444 368887777765 2467999999999999999999999999999999999999999887788887
Q ss_pred HH
Q 003313 611 AV 612 (831)
Q Consensus 611 ~i 612 (831)
+|
T Consensus 253 ~i 254 (254)
T PF08282_consen 253 AI 254 (254)
T ss_dssp HH
T ss_pred hC
Confidence 64
No 54
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.81 E-value=1.7e-08 Score=104.22 Aligned_cols=128 Identities=24% Similarity=0.278 Sum_probs=92.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccC-CcCCCCCcccHHHHHHhcCcEEE-eCh
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLG-RDKDENEALPVDELIEKADGFTD-VFA 546 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~-~~P 546 (831)
++++++.+.++.|++.|+++.++||.....+..+.+.+|+... ........ .... . .+... ..+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~-~~~~~~~~~~~~~---~----------~~~~~~~~~ 150 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAA-FANRLEVEDGKLT---G----------LVEGPIVDA 150 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce-EeeEEEEECCEEE---E----------EecCcccCC
Confidence 5899999999999999999999999999999999999998631 11100000 0000 0 00000 112
Q ss_pred HHHHHHHHHHhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHH
Q 003313 547 EHKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSA 611 (831)
Q Consensus 547 ~~K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~ 611 (831)
..|..+++.+.++ .+.+.++||+.||.+|++.|+++++++ +.+..+++||.++.++++..+...
T Consensus 151 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 151 SYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 3366666655443 246889999999999999999999985 567788999999999998877653
No 55
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=98.81 E-value=1e-08 Score=89.62 Aligned_cols=66 Identities=29% Similarity=0.478 Sum_probs=54.9
Q ss_pred cCCChHHHHHHHHhCC------hHHHhhccceeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccC
Q 003313 350 ENQDAIDAAIINMLAD------PKEARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQE 416 (831)
Q Consensus 350 ~~~~~~~~ai~~~~~~------~~~~~~~~~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~ 416 (831)
..++|.|.|++.++.. ....+..+++++.+||+|++|+|+++++ .++.+.+++|||||.|+++|+.
T Consensus 19 ~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 19 IIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred ccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 3468999999988743 3456789999999999999999999998 3345667999999999999973
No 56
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.79 E-value=2.2e-08 Score=97.12 Aligned_cols=106 Identities=26% Similarity=0.288 Sum_probs=81.6
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEe--ChHHHHHHHH
Q 003313 477 TIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDV--FAEHKYEIVK 554 (831)
Q Consensus 477 ~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~P~~K~~iv~ 554 (831)
+|++|++.|+++.++||++...+..+.+++|+... |... .|+-..++++
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~-----------------------------~~~~~~k~~~~~~~~~ 86 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL-----------------------------YQGQSNKLIAFSDILE 86 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE-----------------------------EecccchHHHHHHHHH
Confidence 89999999999999999999999999999998531 1111 1222233333
Q ss_pred HHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhH-HHHH
Q 003313 555 ILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSV-ICSA 611 (831)
Q Consensus 555 ~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~-i~~~ 611 (831)
.+.-..+.++|+||+.||.+|++.|+++++|.++.+..+..||+++.++.-++ +.++
T Consensus 87 ~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~ 144 (154)
T TIGR01670 87 KLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREV 144 (154)
T ss_pred HcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCCCCcHHHHH
Confidence 33334467999999999999999999999999988899999999998765333 4443
No 57
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.77 E-value=2.5e-08 Score=105.60 Aligned_cols=64 Identities=30% Similarity=0.308 Sum_probs=56.3
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHH
Q 003313 548 HKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSA 611 (831)
Q Consensus 548 ~K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~ 611 (831)
.|..-++.+.+. .+.++++||+.||.+|++.|+.|+||+++++.+|+.||+++.+++-+++.++
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhh
Confidence 588888777663 3579999999999999999999999999999999999999998888888764
No 58
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.73 E-value=1.2e-07 Score=100.35 Aligned_cols=66 Identities=23% Similarity=0.267 Sum_probs=53.6
Q ss_pred HHHHHHHHHhh----c--CCEEEEEcCCccChhhhccCCeeEEecCch---HHHhhh--c-CEEEeCCChhHHHHHHH
Q 003313 548 HKYEIVKILQE----K--KHVVGMTGDGVNDAPALKKADIGIAVAGAT---EAARGA--A-DIVLTEPGLSVICSAVL 613 (831)
Q Consensus 548 ~K~~iv~~l~~----~--g~~v~~iGDG~ND~~al~~AdvgIa~~~~~---~~a~~a--a-divl~~~~~~~i~~~i~ 613 (831)
.|..-++.+.+ . .+.++++||+.||.+|++.|+.||||+|+. +..|+. | ++|..+++-+++.++++
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 36555555543 3 567999999999999999999999999987 468886 4 58888999999998886
No 59
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.66 E-value=8.9e-08 Score=97.55 Aligned_cols=113 Identities=23% Similarity=0.212 Sum_probs=84.7
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCC-----ccccCCcCCCCCcccHHHHHHhcCcEE
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPS-----SLLLGRDKDENEALPVDELIEKADGFT 542 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~v~~ 542 (831)
.+++|++.+.++.++++|++|+++||-...-+..+|+++|++....+. ..+.| .+..
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG------------------~v~g 137 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTG------------------RVVG 137 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEec------------------eeee
Confidence 578999999999999999999999999999999999999997532111 11111 1233
Q ss_pred -EeChHHHHHHHHHHhh-cCC---EEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEE
Q 003313 543 -DVFAEHKYEIVKILQE-KKH---VVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIV 599 (831)
Q Consensus 543 -~~~P~~K~~iv~~l~~-~g~---~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadiv 599 (831)
.+..+.|...++.+.+ .|. .+.++|||.||.|||+.|+.++++..... .+..|+..
T Consensus 138 ~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~-l~~~a~~~ 198 (212)
T COG0560 138 PICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPK-LRALADVR 198 (212)
T ss_pred eecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHH-HHHHHHHh
Confidence 3445788888866655 354 49999999999999999999999975443 33344433
No 60
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.65 E-value=1.9e-07 Score=99.58 Aligned_cols=66 Identities=24% Similarity=0.194 Sum_probs=52.0
Q ss_pred HHHHHHHHHhh-------cCCEEEEEcCCccChhhhccCCeeEEecCch-HH-----HhhhcCEEEeCCChhHHHHHHH
Q 003313 548 HKYEIVKILQE-------KKHVVGMTGDGVNDAPALKKADIGIAVAGAT-EA-----ARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 548 ~K~~iv~~l~~-------~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~-~~-----a~~aadivl~~~~~~~i~~~i~ 613 (831)
+|..-++.+.+ ....|+++|||.||.+||+.|++|||||++. +. .+..+|+++...+-+++.++++
T Consensus 187 sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~ 265 (271)
T PRK03669 187 GKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLD 265 (271)
T ss_pred CHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHH
Confidence 46655555543 3467999999999999999999999999554 21 3457999999999999998886
No 61
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.60 E-value=1.2e-07 Score=94.74 Aligned_cols=109 Identities=26% Similarity=0.322 Sum_probs=83.1
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHH
Q 003313 476 DTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKI 555 (831)
Q Consensus 476 ~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~ 555 (831)
.+|+.|+++|+++.++||.....+..+++++|+... |. ..++|...++.
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~-----------------------------f~--g~~~k~~~l~~ 103 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL-----------------------------YQ--GQSNKLIAFSD 103 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee-----------------------------ec--CCCcHHHHHHH
Confidence 689999999999999999999999999999998521 11 11234444433
Q ss_pred Hh-h---cCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCC----hhHHHHHHHHh
Q 003313 556 LQ-E---KKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPG----LSVICSAVLTS 615 (831)
Q Consensus 556 l~-~---~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~----~~~i~~~i~~g 615 (831)
+. + ..+.++|+||+.||.+|++.|+++++++++.+..+..||+++..++ ...+.+.+...
T Consensus 104 ~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~ 171 (183)
T PRK09484 104 LLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGAVREVCDLLLLA 171 (183)
T ss_pred HHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHh
Confidence 32 2 3457999999999999999999999999888889999999996433 34444444333
No 62
>PRK08238 hypothetical protein; Validated
Probab=98.53 E-value=2.8e-05 Score=88.79 Aligned_cols=101 Identities=17% Similarity=0.191 Sum_probs=75.0
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
|++|++.+.+++++++|+++.++|+-+...+..+++.+|+.+ .++..++ ..++.|+.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd-----~Vigsd~------------------~~~~kg~~ 128 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD-----GVFASDG------------------TTNLKGAA 128 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC-----EEEeCCC------------------ccccCCch
Confidence 478999999999999999999999999999999999999721 1111110 12355666
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHh
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAAR 593 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~ 593 (831)
|.+.++..... +.+.++||..||.++++.|+-.++++.+....+
T Consensus 129 K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~~ 172 (479)
T PRK08238 129 KAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVGASPGVAR 172 (479)
T ss_pred HHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEECCCHHHHH
Confidence 76554432222 225788999999999999999999986554443
No 63
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.53 E-value=2e-07 Score=86.45 Aligned_cols=115 Identities=27% Similarity=0.399 Sum_probs=91.1
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHH
Q 003313 476 DTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKI 555 (831)
Q Consensus 476 ~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~ 555 (831)
-.|+.|+++||++.++||++...+..-|+++||.. +| .--++|....+.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~-----------------------------~~--qG~~dK~~a~~~ 90 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH-----------------------------LY--QGISDKLAAFEE 90 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce-----------------------------ee--echHhHHHHHHH
Confidence 36899999999999999999999999999999952 11 112567776666
Q ss_pred Hhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCC----hhHHHHHHHHhHHHHHH
Q 003313 556 LQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPG----LSVICSAVLTSRTVFQI 621 (831)
Q Consensus 556 l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~----~~~i~~~i~~gR~~~~~ 621 (831)
+.++ -+.|+++||..||.|+|+..+.++|+.++.+..++.||+|+.... .+.+.+.|..++..++-
T Consensus 91 L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~ 164 (170)
T COG1778 91 LLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDE 164 (170)
T ss_pred HHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHH
Confidence 6543 457999999999999999999999999999999999999987654 44455556555555443
No 64
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.52 E-value=5.5e-07 Score=91.83 Aligned_cols=127 Identities=20% Similarity=0.196 Sum_probs=90.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+.++.|+++ +++.++|+.....+..+.+++|+.... ........+ .... -.....|+.
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f-~~~~~~~~~-~~i~------------~~~~~~p~~ 132 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLF-CHSLEVDED-GMIT------------GYDLRQPDG 132 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhh-cceEEECCC-CeEE------------Cccccccch
Confidence 4679999999999999 999999999999999999999985311 110000000 0000 000124678
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCE-EEeCCChhHHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADI-VLTEPGLSVICSAV 612 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadi-vl~~~~~~~i~~~i 612 (831)
|...++.++..+..+.|+|||.||.+|.+.|++|+..+.+.+.....++. ++ +++..+...+
T Consensus 133 k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 195 (205)
T PRK13582 133 KRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAI 195 (205)
T ss_pred HHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHH
Confidence 88889999888899999999999999999999999987654444445565 43 4566665544
No 65
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.51 E-value=5.6e-07 Score=96.15 Aligned_cols=66 Identities=30% Similarity=0.394 Sum_probs=53.4
Q ss_pred HHHHHHHHHhh----cC-CEEEEEcCCccChhhhccCCeeEEecCchHHHh----hhc-CEEE--eCCChhHHHHHHH
Q 003313 548 HKYEIVKILQE----KK-HVVGMTGDGVNDAPALKKADIGIAVAGATEAAR----GAA-DIVL--TEPGLSVICSAVL 613 (831)
Q Consensus 548 ~K~~iv~~l~~----~g-~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~----~aa-divl--~~~~~~~i~~~i~ 613 (831)
.|..-++.+.+ .. +.|+++||+.||.+|++.|++|+||+||.+.+| ++| +.+. ..++-+++.++++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 46555555543 35 889999999999999999999999999999999 666 6777 4666788888775
No 66
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.43 E-value=7.4e-07 Score=90.40 Aligned_cols=117 Identities=24% Similarity=0.323 Sum_probs=82.3
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
+++|++.+.++.|++.|+++.++|+-....+..+++.+|+... ......... ..... -..+....|..
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~-~~~~~~~~~-~g~~~----------p~~~~~~~~~~ 147 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYV-YSNELVFDE-KGFIQ----------PDGIVRVTFDN 147 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeE-EEEEEEEcC-CCeEe----------cceeeEEcccc
Confidence 5889999999999999999999999999999999999997531 111111100 00000 00122344566
Q ss_pred HHHHHHHHhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcC
Q 003313 549 KYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAAD 597 (831)
Q Consensus 549 K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aad 597 (831)
|...++.+.++ .+.+.++||+.||.+|++.|+++++++.+....+.++|
T Consensus 148 k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 148 KGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred HHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 77776665443 34699999999999999999999999865555555555
No 67
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.31 E-value=3.6e-06 Score=86.43 Aligned_cols=135 Identities=13% Similarity=0.041 Sum_probs=87.5
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCc-cccCCcCCCCCcccHHHHHHhcCcE--E-E
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSS-LLLGRDKDENEALPVDELIEKADGF--T-D 543 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~--~-~ 543 (831)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++......... .+.+......... -..+ . .
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~--------~~~~~~~~~ 140 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPH--------PCDGTCQNQ 140 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCC--------CCccccccC
Confidence 4689999999999999999999999999988888888875432221111 1111111000000 0000 0 1
Q ss_pred eChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHh--hhcCEEEeCCChhHHHHHHH
Q 003313 544 VFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAAR--GAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 544 ~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~--~aadivl~~~~~~~i~~~i~ 613 (831)
+ ...|..+++.++...+.+.|+|||.||..|++.||+++|-+.-.+-.+ ..+.+.. ++|..+...++
T Consensus 141 c-g~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 141 C-GCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred C-CCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 1 346999999988888889999999999999999999888552212111 1122222 56777776653
No 68
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.28 E-value=6.3e-06 Score=86.05 Aligned_cols=66 Identities=18% Similarity=0.224 Sum_probs=57.4
Q ss_pred HHHHHHHHHhhc-C---CEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcC----EEEeCCChhHHHHHHH
Q 003313 548 HKYEIVKILQEK-K---HVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAAD----IVLTEPGLSVICSAVL 613 (831)
Q Consensus 548 ~K~~iv~~l~~~-g---~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aad----ivl~~~~~~~i~~~i~ 613 (831)
.|...++.+.++ | ..++++||+.||.+|++.|+.||+|+++.+..|+.|| +|..+++-.++.++|+
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 688888777653 2 3689999999999999999999999999999999999 8877788889998885
No 69
>PLN02954 phosphoserine phosphatase
Probab=98.23 E-value=1e-05 Score=83.64 Aligned_cols=124 Identities=23% Similarity=0.316 Sum_probs=83.3
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC-CCCCCcc-------ccCCcCCCCCcccHHHHHHhcCc
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGT-NMYPSSL-------LLGRDKDENEALPVDELIEKADG 540 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~-~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~v 540 (831)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+.. +...... +.+.... ..
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~--------------~~ 149 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDEN--------------EP 149 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCC--------------Cc
Confidence 377999999999999999999999999999999999999963 1111100 1110000 00
Q ss_pred EEEeChHHHHHHHHHHhhc--CCEEEEEcCCccChhhhcc--CCeeEEecCc--hHHHhhhcCEEEeCCChhHHHH
Q 003313 541 FTDVFAEHKYEIVKILQEK--KHVVGMTGDGVNDAPALKK--ADIGIAVAGA--TEAARGAADIVLTEPGLSVICS 610 (831)
Q Consensus 541 ~~~~~P~~K~~iv~~l~~~--g~~v~~iGDG~ND~~al~~--AdvgIa~~~~--~~~a~~aadivl~~~~~~~i~~ 610 (831)
...+..|.+.++.+.++ .+.++++||+.||..|.++ ++++++.+.+ .+.....+|+++. ++..+..
T Consensus 150 --~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~ 221 (224)
T PLN02954 150 --TSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQDLIE 221 (224)
T ss_pred --ccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHHHHH
Confidence 01123477777766553 3578999999999999877 5666666532 2334456899883 4665554
No 70
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.19 E-value=1.9e-06 Score=86.64 Aligned_cols=92 Identities=24% Similarity=0.305 Sum_probs=69.2
Q ss_pred CChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChH---H
Q 003313 472 HDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAE---H 548 (831)
Q Consensus 472 ~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~---~ 548 (831)
+++.+.|+.++++|++++++||+....+..+++.+|++... +.+.+... .. ......+.+|. .
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~-----v~~~~~~~-~~--------~~~~~~~~~~~~~~~ 157 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN-----VIGNELFD-NG--------GGIFTGRITGSNCGG 157 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG-----EEEEEEEC-TT--------CCEEEEEEEEEEESH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE-----EEEEeeee-cc--------cceeeeeECCCCCCc
Confidence 78889999999999999999999999999999999996421 11111100 00 01134555554 3
Q ss_pred HHHHHHHH------hhcCCEEEEEcCCccChhhhc
Q 003313 549 KYEIVKIL------QEKKHVVGMTGDGVNDAPALK 577 (831)
Q Consensus 549 K~~iv~~l------~~~g~~v~~iGDG~ND~~al~ 577 (831)
|.+.++.+ +.....+.++|||.||.||||
T Consensus 158 K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 158 KAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 99999999 455789999999999999986
No 71
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.15 E-value=4e-06 Score=80.54 Aligned_cols=109 Identities=23% Similarity=0.301 Sum_probs=74.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCC-CCCccccCCcCCCCCcccHHHHHHhcCcEEEeChH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNM-YPSSLLLGRDKDENEALPVDELIEKADGFTDVFAE 547 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~ 547 (831)
.+-|++++.++.|++.|.++.++||--..-+..+|.++||+... +.+...-+..=+-. .++.. -.-....
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~---gfd~~------~ptsdsg 158 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYL---GFDTN------EPTSDSG 158 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCccc---ccccC------CccccCC
Confidence 35689999999999999999999999999999999999997522 11111110000000 00000 0001123
Q ss_pred HHHHHHHHHhhc--CCEEEEEcCCccChhhhccCCeeEEec
Q 003313 548 HKYEIVKILQEK--KHVVGMTGDGVNDAPALKKADIGIAVA 586 (831)
Q Consensus 548 ~K~~iv~~l~~~--g~~v~~iGDG~ND~~al~~AdvgIa~~ 586 (831)
.|.++++.+++. -..++|+|||.||.+|+..||.=|+.+
T Consensus 159 gKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 159 GKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred ccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 689999988874 457999999999999999976666654
No 72
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.11 E-value=1.4e-05 Score=84.06 Aligned_cols=146 Identities=17% Similarity=0.116 Sum_probs=97.6
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCC--C--CCccc-cCCc--------------------
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNM--Y--PSSLL-LGRD-------------------- 522 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~--~--~~~~~-~~~~-------------------- 522 (831)
.+..|...++++++++.|+.++++||+.....+.+.+++++..+. . .+..+ .+..
T Consensus 20 ~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (249)
T TIGR01485 20 NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIV 99 (249)
T ss_pred hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHH
Confidence 456788999999999999999999999999999999999875431 0 11111 0000
Q ss_pred ---------------CCCC--------Cccc----H---HHHHHhc--Cc--------EEEeCh--HHHHHHHHHHhhc-
Q 003313 523 ---------------KDEN--------EALP----V---DELIEKA--DG--------FTDVFA--EHKYEIVKILQEK- 559 (831)
Q Consensus 523 ---------------~~~~--------~~~~----~---~~~~~~~--~v--------~~~~~P--~~K~~iv~~l~~~- 559 (831)
.... ..+. + .+.+.+. .+ +..+.| ..|..-++.+.+.
T Consensus 100 ~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~ 179 (249)
T TIGR01485 100 VAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKL 179 (249)
T ss_pred HHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHc
Confidence 0000 0001 1 1111111 11 113344 3688888877653
Q ss_pred ---CCEEEEEcCCccChhhhcc-CCeeEEecCchHHHhhhcC-------EEEeCCChhHHHHHHH
Q 003313 560 ---KHVVGMTGDGVNDAPALKK-ADIGIAVAGATEAARGAAD-------IVLTEPGLSVICSAVL 613 (831)
Q Consensus 560 ---g~~v~~iGDG~ND~~al~~-AdvgIa~~~~~~~a~~aad-------ivl~~~~~~~i~~~i~ 613 (831)
...|+++||+.||.+|++. ++.|++|+|+.+..|+.++ ++.....-+++.++++
T Consensus 180 ~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 180 AMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred CCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 4679999999999999998 7799999999998887543 6555556778888774
No 73
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.05 E-value=1.5e-05 Score=79.79 Aligned_cols=114 Identities=15% Similarity=0.089 Sum_probs=76.1
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEE-eCh
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTD-VFA 546 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~P 546 (831)
-++++++.+.++.|++.|+++.++|+.+......+.+..|+.... ..++ +.+.....+..+.....++..+.. ...
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~-~~~~~~~~~g~~~~~~~~~~~~~~~~~g 147 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF--IEIY-SNPASFDNDGRHIVWPHHCHGCCSCPCG 147 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe--eEEe-ccCceECCCCcEEEecCCCCccCcCCCC
Confidence 378899999999999999999999999999999999999885311 1111 111100000000000000111111 112
Q ss_pred HHHHHHHHHHhhc-CCEEEEEcCCccChhhhccCCeeEE
Q 003313 547 EHKYEIVKILQEK-KHVVGMTGDGVNDAPALKKADIGIA 584 (831)
Q Consensus 547 ~~K~~iv~~l~~~-g~~v~~iGDG~ND~~al~~AdvgIa 584 (831)
..|.++++.++++ .+.+.++|||.||..|.++||+-.|
T Consensus 148 ~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 148 CCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 3589999999887 8899999999999999999987655
No 74
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.04 E-value=1.7e-05 Score=81.76 Aligned_cols=134 Identities=14% Similarity=0.095 Sum_probs=83.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC-CCC-CccccCCcCCCCCcccHHHHHHhcCcE-EEeC
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTN-MYP-SSLLLGRDKDENEALPVDELIEKADGF-TDVF 545 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~ 545 (831)
+++|++.+.++.|++.|+++.++||-....+..+.+.+ +... ... ...+.+.........+ ...-+ .++
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p------~~~~~~~~~- 145 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHP------CDEHCQNHC- 145 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCC------ccccccccC-
Confidence 68999999999999999999999999999999998887 6431 110 0011111100000000 00000 001
Q ss_pred hHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHh--hhcCEEEeCCChhHHHHHH
Q 003313 546 AEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAAR--GAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 546 P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~--~aadivl~~~~~~~i~~~i 612 (831)
...|...++.++.....+.|+|||.||..|.+.||+.++-+.-.+.++ ..+.+.+ ++|..+...+
T Consensus 146 ~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 146 GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARDFLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHHHHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 124888888888877789999999999999999999777431112211 1233333 5577766655
No 75
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.03 E-value=9.6e-06 Score=80.44 Aligned_cols=101 Identities=23% Similarity=0.280 Sum_probs=69.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++++++.+.++.+++.|++++++||.....+..+++.+|+... ......... +..+.. ....-....+..
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~-~~~~~~~~~------~g~~~g---~~~~~~~~~~~~ 142 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDV-FANRLEFDD------NGLLTG---PIEGQVNPEGEC 142 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchh-eeeeEEECC------CCEEeC---ccCCcccCCcch
Confidence 3689999999999999999999999999999999999998631 111100000 000000 000001244578
Q ss_pred HHHHHHHHhhc----CCEEEEEcCCccChhhhccC
Q 003313 549 KYEIVKILQEK----KHVVGMTGDGVNDAPALKKA 579 (831)
Q Consensus 549 K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~A 579 (831)
|...++.++++ .+.+.++|||.||.+|++.|
T Consensus 143 K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 143 KGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 99888887654 35689999999999999875
No 76
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.00 E-value=3.8e-05 Score=79.38 Aligned_cols=127 Identities=15% Similarity=0.100 Sum_probs=88.8
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChH
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAE 547 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~ 547 (831)
-++.|++.+.++.|++.|+++.++||........+.+..|+.... ...+...+.. ...-.|+
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~----------------~~kp~~~ 153 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF--SVVIGGDSLP----------------NKKPDPA 153 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc--cEEEcCCCCC----------------CCCcChH
Confidence 357899999999999999999999999999999999999985321 1111111000 0011233
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccChhhhccCCe-eEEecC----chHHHhhhcCEEEeCCChhHHHHHHHH
Q 003313 548 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADI-GIAVAG----ATEAARGAADIVLTEPGLSVICSAVLT 614 (831)
Q Consensus 548 ~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Adv-gIa~~~----~~~~a~~aadivl~~~~~~~i~~~i~~ 614 (831)
--...++.++...+.++++||+.||+.+.+.|++ +|.+.. ..+.....+++++ +++..+...+.+
T Consensus 154 ~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 154 PLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred HHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 3344555555566789999999999999999998 555532 3344455788887 678888877654
No 77
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=97.96 E-value=1.8e-05 Score=80.46 Aligned_cols=108 Identities=18% Similarity=0.137 Sum_probs=76.4
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcE-EEeCh
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGF-TDVFA 546 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~P 546 (831)
.++++++.+.++.+++.|++++++||.....+..+++.+|+..- ...+.....+ ..... .+. -.+.+
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~-~~~~l~~~~~-g~~~g----------~~~~~~~~g 153 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNA-IGTRLEESED-GIYTG----------NIDGNNCKG 153 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcce-EecceEEcCC-CEEeC----------CccCCCCCC
Confidence 46889999999999999999999999999999999999998531 1111110000 00000 000 12345
Q ss_pred HHHHHHHHHHhh-cC---CEEEEEcCCccChhhhccCCeeEEecC
Q 003313 547 EHKYEIVKILQE-KK---HVVGMTGDGVNDAPALKKADIGIAVAG 587 (831)
Q Consensus 547 ~~K~~iv~~l~~-~g---~~v~~iGDG~ND~~al~~AdvgIa~~~ 587 (831)
+.|.+.++.+.+ .+ +.+.++||+.||.||++.|+.++++..
T Consensus 154 ~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 154 EGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred hHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCC
Confidence 778877766544 33 368899999999999999999999863
No 78
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.92 E-value=6.1e-05 Score=77.69 Aligned_cols=125 Identities=18% Similarity=0.180 Sum_probs=92.1
Q ss_pred cCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccC-CcCCCCCcccHHHHHHhcCcEEEeC
Q 003313 467 FDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLG-RDKDENEALPVDELIEKADGFTDVF 545 (831)
Q Consensus 467 ~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~ 545 (831)
...+-|+++++++.|+++|++..++|+++...+..+.+..|+.... ..+.+ .... ..+-.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F---~~i~g~~~~~----------------~~KP~ 147 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYF---DVIVGGDDVP----------------PPKPD 147 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcccc---ceEEcCCCCC----------------CCCcC
Confidence 3457799999999999999999999999999999999999986421 11111 1000 11234
Q ss_pred hHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCC---eeEEecC--chHHHhhhcCEEEeCCChhHHHHHH
Q 003313 546 AEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKAD---IGIAVAG--ATEAARGAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 546 P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Ad---vgIa~~~--~~~~a~~aadivl~~~~~~~i~~~i 612 (831)
|+.....++.+....+.++||||..+|..|-++|+ ||+..|. ........+|.++ +++..+...+
T Consensus 148 P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l 217 (220)
T COG0546 148 PEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALL 217 (220)
T ss_pred HHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHH
Confidence 55566666666655457999999999999999998 6677773 4566677799998 5577666554
No 79
>PLN02382 probable sucrose-phosphatase
Probab=97.89 E-value=7.9e-05 Score=83.91 Aligned_cols=140 Identities=20% Similarity=0.174 Sum_probs=89.8
Q ss_pred hHHHH-HHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC----CCc-cccCCc-------------------------
Q 003313 474 SSDTI-HRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMY----PSS-LLLGRD------------------------- 522 (831)
Q Consensus 474 ~~~~I-~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~----~~~-~~~~~~------------------------- 522 (831)
..+++ +++++.|+.+++.||+.+.....+.++.++..+.+ .+. +..+..
T Consensus 33 ~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~~ 112 (413)
T PLN02382 33 RFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEETS 112 (413)
T ss_pred HHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHHh
Confidence 44455 88999999999999999999999999998765410 000 000000
Q ss_pred -C---------CCC--------Cccc-------HHHHHHh----cC------cEEEeChH--HHHHHHHHHhhc------
Q 003313 523 -K---------DEN--------EALP-------VDELIEK----AD------GFTDVFAE--HKYEIVKILQEK------ 559 (831)
Q Consensus 523 -~---------~~~--------~~~~-------~~~~~~~----~~------v~~~~~P~--~K~~iv~~l~~~------ 559 (831)
. ++. ..+. +.+.+.+ +. -+..+.|. .|..-++.+.++
T Consensus 113 ~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi 192 (413)
T PLN02382 113 KFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEGK 192 (413)
T ss_pred cCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcCC
Confidence 0 000 0001 1111111 11 12344553 488888777654
Q ss_pred -CCEEEEEcCCccChhhhccCC-eeEEecCchHHHhhhc--------CEEEe-CCChhHHHHHHH
Q 003313 560 -KHVVGMTGDGVNDAPALKKAD-IGIAVAGATEAARGAA--------DIVLT-EPGLSVICSAVL 613 (831)
Q Consensus 560 -g~~v~~iGDG~ND~~al~~Ad-vgIa~~~~~~~a~~aa--------divl~-~~~~~~i~~~i~ 613 (831)
...++++||+.||.+||+.|+ .||+|+|+.+..|+.+ +++.. +++-++|.++++
T Consensus 193 ~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~ 257 (413)
T PLN02382 193 APVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIG 257 (413)
T ss_pred ChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHH
Confidence 247899999999999999999 6999999999988743 55544 345667777664
No 80
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=97.88 E-value=4.4e-05 Score=78.95 Aligned_cols=44 Identities=11% Similarity=0.132 Sum_probs=39.1
Q ss_pred cCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q 003313 467 FDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGT 510 (831)
Q Consensus 467 ~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~ 510 (831)
.+..-+++.++|++|+++|++++++||+....+..+.+++|+..
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 45556679999999999999999999999999999999999843
No 81
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.83 E-value=9.6e-05 Score=75.31 Aligned_cols=124 Identities=15% Similarity=0.119 Sum_probs=84.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.+++.+.+++|+++|+++.++||.....+....+..|+.... ..++...+. ...+-.|+-
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~----------------~~~KP~~~~ 136 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF--DHVIGSDEV----------------PRPKPAPDI 136 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe--eeEEecCcC----------------CCCCCChHH
Confidence 67899999999999999999999999999888888889885310 011111000 011112333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEe---c--CchHHHhhhcCEEEeCCChhHHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV---A--GATEAARGAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~---~--~~~~~a~~aadivl~~~~~~~i~~~i 612 (831)
=.++++.++-..+.++|+||+.+|..+-++|++.... | +..+..++.+|+++ +++..+..++
T Consensus 137 ~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 137 VREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred HHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 3444555554567799999999999999999986432 3 33345567799987 5566665543
No 82
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.77 E-value=5.2e-05 Score=70.93 Aligned_cols=118 Identities=14% Similarity=0.052 Sum_probs=75.4
Q ss_pred cccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEe
Q 003313 465 PLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDV 544 (831)
Q Consensus 465 ~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 544 (831)
.-..++++++.+.+++|++.|++++++||.....+....+.+|+... ...++......................+.+-
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDY--FDPVITSNGAAIYYPKEGLFLGGGPFDIGKP 97 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchh--hhheeccchhhhhcccccccccccccccCCC
Confidence 34558899999999999999999999999999999999999987321 0111110000000000000000000122344
Q ss_pred ChHHHHHHHHHHhhcCCEEEEEcCCccChhhhcc-CCeeEE
Q 003313 545 FAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKK-ADIGIA 584 (831)
Q Consensus 545 ~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~-AdvgIa 584 (831)
.|+.+..+.+.+....+.+.++||+.||+.|++. ..-+|+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 98 NPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 5566666777766666789999999999999998 444444
No 83
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.70 E-value=0.00011 Score=77.98 Aligned_cols=138 Identities=11% Similarity=0.083 Sum_probs=85.1
Q ss_pred CCCCChHHHHHHHHh-CCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccc---C----CcCC----------------
Q 003313 469 PPRHDSSDTIHRALK-LGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLL---G----RDKD---------------- 524 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~-~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~---~----~~~~---------------- 524 (831)
.+-+++.++|++|++ .|++++++||++......+.+.+++.-...++..+. + ..++
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 445789999999998 799999999999999988887766421000000000 0 0000
Q ss_pred -------------------CC--CcccHHHHHH----hcC--------cEEEeChH--HHHHHHHHHhhc----CCEEEE
Q 003313 525 -------------------EN--EALPVDELIE----KAD--------GFTDVFAE--HKYEIVKILQEK----KHVVGM 565 (831)
Q Consensus 525 -------------------~~--~~~~~~~~~~----~~~--------v~~~~~P~--~K~~iv~~l~~~----g~~v~~ 565 (831)
.. ..+.+.++.+ ... .+.++.|. +|..-++.+.+. ...+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 00 0011111111 111 12233343 687777766543 457999
Q ss_pred EcCCccChhhhccC----CeeEEecCchHHHhhhcCEEEeCCChhHHHHHH
Q 003313 566 TGDGVNDAPALKKA----DIGIAVAGATEAARGAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 566 iGDG~ND~~al~~A----dvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i 612 (831)
+||+.||.+|++.+ +.||+||++. ..|++.+. +...+...+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~----~~A~~~l~--~~~~v~~~L 240 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGA----TQASWRLA--GVPDVWSWL 240 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCC----CcCeEeCC--CHHHHHHHH
Confidence 99999999999999 9999999875 45777774 455555544
No 84
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.67 E-value=0.00028 Score=72.85 Aligned_cols=38 Identities=18% Similarity=0.219 Sum_probs=35.5
Q ss_pred CChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 003313 472 HDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIG 509 (831)
Q Consensus 472 ~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~ 509 (831)
+.+.++|++++++|++++++||+....+..+.+++|+.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 44899999999999999999999999999999999986
No 85
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.57 E-value=0.00038 Score=74.26 Aligned_cols=125 Identities=17% Similarity=0.142 Sum_probs=81.9
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChH
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAE 547 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~ 547 (831)
.++.+++.++++.|++.|+++.++||.+...+..+.++.|+.... ..++.+.+.. ...-.|+
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f--~~i~~~d~~~----------------~~Kp~p~ 161 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF--RWIIGGDTLP----------------QKKPDPA 161 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC--eEEEecCCCC----------------CCCCCcH
Confidence 367899999999999999999999999998888888888874311 1111111000 0011122
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccChhhhccCCee-EEe--c--CchHHHhhhcCEEEeCCChhHHHHHH
Q 003313 548 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG-IAV--A--GATEAARGAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 548 ~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Advg-Ia~--~--~~~~~a~~aadivl~~~~~~~i~~~i 612 (831)
--..+.+.+.-..+.++++||+.||+.+.+.|++. +++ | ...+..+..+|.++ +++..+..++
T Consensus 162 ~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~ 229 (272)
T PRK13223 162 ALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGC 229 (272)
T ss_pred HHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHH
Confidence 22334444443456799999999999999999973 444 3 22333445789888 4577766543
No 86
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.57 E-value=0.00033 Score=71.86 Aligned_cols=124 Identities=17% Similarity=0.108 Sum_probs=83.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+.++.|+++|+++.++|+.....+..+.+..|+.... ..++...+.. ..+-.|+-
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~----------------~~Kp~p~~ 143 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF--DVVITLDDVE----------------HAKPDPEP 143 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce--eEEEecCcCC----------------CCCCCcHH
Confidence 36799999999999999999999999999999999999985311 1111111000 01122333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeE---EecC--chHHHhhhcCEEEeCCChhHHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI---AVAG--ATEAARGAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgI---a~~~--~~~~a~~aadivl~~~~~~~i~~~i 612 (831)
-.++++.++.....+++|||+.+|..|-++|++-. .-|. ..+.....+|+++ +++..+...+
T Consensus 144 ~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 144 VLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 34455555545567999999999999999999843 3342 2223345688887 4677776654
No 87
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.52 E-value=0.00038 Score=71.23 Aligned_cols=122 Identities=14% Similarity=0.088 Sum_probs=80.3
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+.++.|++.|+++.++|+.+...+..+.+..|+.... ..++.+.+.. ..+-.|+-
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~----------------~~Kp~p~~ 146 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF--SVLIGGDSLA----------------QRKPHPDP 146 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC--cEEEecCCCC----------------CCCCChHH
Confidence 57899999999999999999999999999999999999985311 1111111000 01111222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEe---cCc--hHHHhhhcCEEEeCCChhHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV---AGA--TEAARGAADIVLTEPGLSVICS 610 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~---~~~--~~~a~~aadivl~~~~~~~i~~ 610 (831)
=.+..+.++...+.++++||+.||+.|.++|++-... |.+ .+.....+|+++ +++..+..
T Consensus 147 ~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~~ 211 (213)
T TIGR01449 147 LLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELPP 211 (213)
T ss_pred HHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHHh
Confidence 2334444444456799999999999999999987653 322 223334688887 44655543
No 88
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.42 E-value=0.0011 Score=69.77 Aligned_cols=43 Identities=7% Similarity=-0.019 Sum_probs=38.7
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGT 510 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~ 510 (831)
+..-+.+.++|++|+++||.++++||........+.+++|+..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 3455679999999999999999999999999999999999864
No 89
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.34 E-value=0.00078 Score=69.55 Aligned_cols=121 Identities=13% Similarity=0.125 Sum_probs=78.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.++++.|++.|+++.++|+........+.++.|+..-. ..++.+.+.. ..+-.|+-
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~----------------~~Kp~~~~ 153 (222)
T PRK10826 92 PLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF--DALASAEKLP----------------YSKPHPEV 153 (222)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc--cEEEEcccCC----------------CCCCCHHH
Confidence 57899999999999999999999999999999999999985421 1111111000 11112222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEec-C---chHHHhhhcCEEEeCCChhHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVA-G---ATEAARGAADIVLTEPGLSVIC 609 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~-~---~~~~a~~aadivl~~~~~~~i~ 609 (831)
=....+.+.-..+.++++||..||+.+-++|++....- . +.+.-...+|.++ .++..+.
T Consensus 154 ~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~--~~~~dl~ 216 (222)
T PRK10826 154 YLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKL--ESLTELT 216 (222)
T ss_pred HHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheec--cCHHHHh
Confidence 22333333333456999999999999999999876552 2 2222233577776 4465554
No 90
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.33 E-value=0.0027 Score=66.85 Aligned_cols=127 Identities=13% Similarity=0.109 Sum_probs=83.5
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC----------CCccccCCcCCCCCcccHHHHHHh
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMY----------PSSLLLGRDKDENEALPVDELIEK 537 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~ 537 (831)
-++|||+.+.++.|++.|+++.++||-....+..+.++.|+..... ...++.|..-.
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P------------- 186 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGP------------- 186 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCC-------------
Confidence 4689999999999999999999999999999999999999853210 11122221100
Q ss_pred cCcEEEeChHHHHHHHH-----HHh--hcCCEEEEEcCCccChhhhccC---CeeEEec--Cc-----hHHHhhhcCEEE
Q 003313 538 ADGFTDVFAEHKYEIVK-----ILQ--EKKHVVGMTGDGVNDAPALKKA---DIGIAVA--GA-----TEAARGAADIVL 600 (831)
Q Consensus 538 ~~v~~~~~P~~K~~iv~-----~l~--~~g~~v~~iGDG~ND~~al~~A---dvgIa~~--~~-----~~~a~~aadivl 600 (831)
-+....|.+.+. .++ .....|.++|||.||+.|..-. .--+.+| +. -+.=+++=|||+
T Consensus 187 -----~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl 261 (277)
T TIGR01544 187 -----LIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVL 261 (277)
T ss_pred -----cccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEE
Confidence 000123444332 222 2345789999999999996543 2334444 22 233456789999
Q ss_pred eCCChhHHHHHH
Q 003313 601 TEPGLSVICSAV 612 (831)
Q Consensus 601 ~~~~~~~i~~~i 612 (831)
.+|.--.++.+|
T Consensus 262 ~~D~t~~v~~~i 273 (277)
T TIGR01544 262 VQDETLEVANSI 273 (277)
T ss_pred ECCCCchHHHHH
Confidence 998766666655
No 91
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.25 E-value=0.00087 Score=68.45 Aligned_cols=107 Identities=10% Similarity=-0.004 Sum_probs=75.2
Q ss_pred CCCCChHHHHH-HHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChH
Q 003313 469 PPRHDSSDTIH-RALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAE 547 (831)
Q Consensus 469 ~lr~~~~~~I~-~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~ 547 (831)
.++|++.+.|+ .+++.|++++++|+-....+..+|+..|+... .+++ +.+++......+ .-..|..+
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~---~~~i-~t~le~~~gg~~--------~g~~c~g~ 161 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR---LNLI-ASQIERGNGGWV--------LPLRCLGH 161 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc---CcEE-EEEeEEeCCceE--------cCccCCCh
Confidence 46899999996 78989999999999999999999998665321 1111 222221000000 12346778
Q ss_pred HHHHHHHHH-hhcCCEEEEEcCCccChhhhccCCeeEEecC
Q 003313 548 HKYEIVKIL-QEKKHVVGMTGDGVNDAPALKKADIGIAVAG 587 (831)
Q Consensus 548 ~K~~iv~~l-~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~ 587 (831)
+|.+-++.. ........+-||+.||.|||+.||.+++++.
T Consensus 162 ~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 162 EKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred HHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEECc
Confidence 898877644 3333456688999999999999999999974
No 92
>PRK11590 hypothetical protein; Provisional
Probab=97.19 E-value=0.0023 Score=65.51 Aligned_cols=109 Identities=11% Similarity=-0.021 Sum_probs=76.0
Q ss_pred CCCCChHHHH-HHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChH
Q 003313 469 PPRHDSSDTI-HRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAE 547 (831)
Q Consensus 469 ~lr~~~~~~I-~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~ 547 (831)
.++|++.+.| +.+++.|++++++|+-....+..+++.+|+... .. +.+.+++. .... + -.-..|..+
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~---~~-~i~t~l~~----~~tg---~-~~g~~c~g~ 162 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPR---VN-LIASQMQR----RYGG---W-VLTLRCLGH 162 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcccccc---Cc-eEEEEEEE----EEcc---E-ECCccCCCh
Confidence 4589999999 578889999999999999999999999995210 01 11222110 0000 0 001246678
Q ss_pred HHHHHHHHH-hhcCCEEEEEcCCccChhhhccCCeeEEecCch
Q 003313 548 HKYEIVKIL-QEKKHVVGMTGDGVNDAPALKKADIGIAVAGAT 589 (831)
Q Consensus 548 ~K~~iv~~l-~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~ 589 (831)
+|.+-++.. ........+-||+.||.|||+.|+.+++++...
T Consensus 163 ~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~~ 205 (211)
T PRK11590 163 EKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTPRG 205 (211)
T ss_pred HHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECccH
Confidence 898877654 434455678899999999999999999997443
No 93
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=97.19 E-value=0.002 Score=66.31 Aligned_cols=124 Identities=17% Similarity=0.145 Sum_probs=79.7
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC-CCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeCh
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGT-NMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFA 546 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P 546 (831)
.++.+|+.+.+++|++.|+++.++|+-....+..+.+.+|+.. +.. ..++...+.. ..+-.|
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f-~~i~~~~~~~----------------~~KP~p 148 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDV-DAVVCPSDVA----------------AGRPAP 148 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccC-CEEEcCCcCC----------------CCCCCH
Confidence 3688999999999999999999999999999999999999851 111 1122111110 011122
Q ss_pred HHHHHHHHHHhhc-CCEEEEEcCCccChhhhccCCeeEE--ecCc---h-HHHhhhcCEEEeCCChhHHHH
Q 003313 547 EHKYEIVKILQEK-KHVVGMTGDGVNDAPALKKADIGIA--VAGA---T-EAARGAADIVLTEPGLSVICS 610 (831)
Q Consensus 547 ~~K~~iv~~l~~~-g~~v~~iGDG~ND~~al~~AdvgIa--~~~~---~-~~a~~aadivl~~~~~~~i~~ 610 (831)
+-=....+.+.-. ...++|+||+.+|+.+-++|++..+ +..| . +.....+|.++ +++..+..
T Consensus 149 ~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~ 217 (220)
T TIGR03351 149 DLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPA 217 (220)
T ss_pred HHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHH
Confidence 2222333333333 3579999999999999999999863 3222 1 22234577776 44655544
No 94
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.18 E-value=0.0011 Score=77.21 Aligned_cols=40 Identities=10% Similarity=0.078 Sum_probs=36.3
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 003313 470 PRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIG 509 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~ 509 (831)
.-+.+.++|++++++|+.++++||+....+..+++++|+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 3457899999999999999999999999999999999974
No 95
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.18 E-value=0.0018 Score=67.28 Aligned_cols=124 Identities=12% Similarity=0.046 Sum_probs=82.5
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+.++.|++.|+++.++|+.+...+..+-+..|+.... ..++.+.+.. ..+-.|+-
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~~----------------~~KP~p~~ 156 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC--AVLIGGDTLA----------------ERKPHPLP 156 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc--cEEEecCcCC----------------CCCCCHHH
Confidence 57899999999999999999999999988888888888875311 1111111000 11222333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEE-e--cCc--h-HHHhhhcCEEEeCCChhHHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA-V--AGA--T-EAARGAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa-~--~~~--~-~~a~~aadivl~~~~~~~i~~~i 612 (831)
=...++.+.-..+.++||||+.||..|-+.|++... + |.. . ......+|+++ +++..+.+.+
T Consensus 157 ~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~~ 224 (229)
T PRK13226 157 LLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNPA 224 (229)
T ss_pred HHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHHh
Confidence 345555565556779999999999999999988743 2 321 1 12234689988 5566665544
No 96
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.15 E-value=0.0042 Score=66.17 Aligned_cols=121 Identities=13% Similarity=0.102 Sum_probs=80.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+.++.|++.|+++.++|+.+...+..+-+.+|+.... + .++.+.+. . ..|+-
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F-~-~vi~~~~~-----------------~--~k~~~ 200 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLF-S-VVQAGTPI-----------------L--SKRRA 200 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhhe-E-EEEecCCC-----------------C--CCHHH
Confidence 46799999999999999999999999999999999999985321 1 11111100 0 01211
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEe---cCch--HHHhhhcCEEEeCCChhHHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV---AGAT--EAARGAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~---~~~~--~~a~~aadivl~~~~~~~i~~~i 612 (831)
=..+++.++-..+.++||||+.+|+.+-++|++-... |..+ +.....+|+++ +++..+...+
T Consensus 201 ~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 201 LSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred HHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 1222333333445799999999999999999986542 3222 23344689887 5677776654
No 97
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.08 E-value=0.0058 Score=60.48 Aligned_cols=143 Identities=17% Similarity=0.168 Sum_probs=92.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHH------------
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIE------------ 536 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 536 (831)
++-|++.++++.|++. ...+++|---.+-+.++|..+|++........+.-++... ..++..+++.
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~-PeeeR~E~L~~~~~~~~~~gee 160 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAV-PEEEREELLSIIDVIASLSGEE 160 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccC-ChHHHHHHHHhcCccccccHHH
Confidence 3568999999999876 4566666667788899999999964322211111110000 1111112211
Q ss_pred ---hc-CcEEEeChHH---------------HHHHHHHHhhc---CCEEEEEcCCccChhhhccCC-e-eEEec-CchHH
Q 003313 537 ---KA-DGFTDVFAEH---------------KYEIVKILQEK---KHVVGMTGDGVNDAPALKKAD-I-GIAVA-GATEA 591 (831)
Q Consensus 537 ---~~-~v~~~~~P~~---------------K~~iv~~l~~~---g~~v~~iGDG~ND~~al~~Ad-v-gIa~~-~~~~~ 591 (831)
+. .+|.|..|.+ |+++++.+-+. ....+++||++.|+.||+.+. - |+|+. ||.+-
T Consensus 161 lfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeY 240 (315)
T COG4030 161 LFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEY 240 (315)
T ss_pred HHHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCcc
Confidence 11 2577887765 44555544442 345789999999999999873 3 37776 78888
Q ss_pred HhhhcCEEEeCCChhHHHHHHH
Q 003313 592 ARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 592 a~~aadivl~~~~~~~i~~~i~ 613 (831)
|..-||+.+.+++..+....|+
T Consensus 241 al~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 241 ALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred cccccceEEeccchhhhhHHHH
Confidence 8889999999999888777764
No 98
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.08 E-value=0.0024 Score=77.72 Aligned_cols=169 Identities=18% Similarity=0.154 Sum_probs=101.2
Q ss_pred HHHHHHHHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccc--cCCCCCChHHHHHHHHh-CCCeEEEEcCCCHHHHHH
Q 003313 425 HEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPL--FDPPRHDSSDTIHRALK-LGVCVKMITGDHLAIAKE 501 (831)
Q Consensus 425 ~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~--~D~lr~~~~~~I~~l~~-~Gi~v~m~TGD~~~~a~~ 501 (831)
+.....|.+.-.|.+++-+++ |++....- ...+.+++.+++++|.+ .|+.|+++||+.......
T Consensus 481 ~~~~~~y~~~~~rLi~~D~DG-------------TL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~ 547 (726)
T PRK14501 481 EEIIARYRAASRRLLLLDYDG-------------TLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLER 547 (726)
T ss_pred HHHHHHHHhccceEEEEecCc-------------cccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHH
Confidence 444556666667888887766 55443211 12356789999999999 599999999999998877
Q ss_pred HHHHhCCCCCCCCCcccc--CCcC------C------------------------C----------CCcc--------cH
Q 003313 502 TGRRLGIGTNMYPSSLLL--GRDK------D------------------------E----------NEAL--------PV 531 (831)
Q Consensus 502 ia~~~gi~~~~~~~~~~~--~~~~------~------------------------~----------~~~~--------~~ 531 (831)
.....++.--..++..+. +.+. + . ..+. ++
T Consensus 548 ~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l 627 (726)
T PRK14501 548 WFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANEL 627 (726)
T ss_pred HhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHH
Confidence 765555310000000000 0000 0 0 0000 01
Q ss_pred HHHHHh----cC-------cEEEeCh--HHHHHHHHHHhhc--CCEEEEEcCCccChhhhccC---CeeEEecCchHHHh
Q 003313 532 DELIEK----AD-------GFTDVFA--EHKYEIVKILQEK--KHVVGMTGDGVNDAPALKKA---DIGIAVAGATEAAR 593 (831)
Q Consensus 532 ~~~~~~----~~-------v~~~~~P--~~K~~iv~~l~~~--g~~v~~iGDG~ND~~al~~A---dvgIa~~~~~~~a~ 593 (831)
.+.+.. .. -+..+.| -+|...++.+.+. ...++++||+.||.+|++.+ ..+|+||++ +
T Consensus 628 ~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~ 703 (726)
T PRK14501 628 ILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----E 703 (726)
T ss_pred HHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----C
Confidence 111111 00 1123334 3688888888763 35899999999999999986 688888874 4
Q ss_pred hhcCEEEeCCChhHHHHHH
Q 003313 594 GAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 594 ~aadivl~~~~~~~i~~~i 612 (831)
.+|++.+.+. ..+...+
T Consensus 704 s~A~~~l~~~--~eV~~~L 720 (726)
T PRK14501 704 SRARYRLPSQ--REVRELL 720 (726)
T ss_pred CcceEeCCCH--HHHHHHH
Confidence 6788888653 4455544
No 99
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=97.05 E-value=0.004 Score=66.26 Aligned_cols=96 Identities=11% Similarity=-0.020 Sum_probs=63.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.++++.|++.|+++.++||.....+..+-+..|+.... ...++...+.. ..+-.|+-
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~-~d~i~~~~~~~----------------~~KP~p~~ 163 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYR-PDHVVTTDDVP----------------AGRPYPWM 163 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCC-ceEEEcCCcCC----------------CCCCChHH
Confidence 46789999999999999999999999998888877777764311 11111111100 01112222
Q ss_pred HHHHHHHHhhc-CCEEEEEcCCccChhhhccCCe
Q 003313 549 KYEIVKILQEK-KHVVGMTGDGVNDAPALKKADI 581 (831)
Q Consensus 549 K~~iv~~l~~~-g~~v~~iGDG~ND~~al~~Adv 581 (831)
=....+.+.-. ...++||||+.+|+.+-+.|++
T Consensus 164 ~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 164 ALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred HHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 22333333322 2569999999999999999997
No 100
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=97.01 E-value=0.0031 Score=66.14 Aligned_cols=67 Identities=24% Similarity=0.254 Sum_probs=45.8
Q ss_pred HHHHHHHHHHhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHH-----Hhhh---cCE-EEeCCChhHHHHHHH
Q 003313 547 EHKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEA-----ARGA---ADI-VLTEPGLSVICSAVL 613 (831)
Q Consensus 547 ~~K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~-----a~~a---adi-vl~~~~~~~i~~~i~ 613 (831)
..|..-++.++++ .+.|.++||+.||.+||..++-||.++|+.+. .... ..+ .-..+.-.+|.++++
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~ 243 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQ 243 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHH
Confidence 3699999888875 24678899999999999999999999988877 2222 233 334445567777764
No 101
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=96.97 E-value=0.0049 Score=64.98 Aligned_cols=98 Identities=13% Similarity=0.003 Sum_probs=66.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+.++.|+++|+++.++||.....+..+-+.+|+.... ...++.+.+.. ..+-.|+-
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f-~d~ii~~~~~~----------------~~KP~p~~ 161 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYR-PDYNVTTDDVP----------------AGRPAPWM 161 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCC-CceEEccccCC----------------CCCCCHHH
Confidence 46789999999999999999999999999999988888875421 11122111110 11112222
Q ss_pred HHHHHHHHhhc-CCEEEEEcCCccChhhhccCCeeE
Q 003313 549 KYEIVKILQEK-KHVVGMTGDGVNDAPALKKADIGI 583 (831)
Q Consensus 549 K~~iv~~l~~~-g~~v~~iGDG~ND~~al~~AdvgI 583 (831)
=....+.+.-. .+.++||||..+|+.+-+.|++-.
T Consensus 162 ~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~ 197 (253)
T TIGR01422 162 ALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWT 197 (253)
T ss_pred HHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeE
Confidence 23333444332 456999999999999999999653
No 102
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=96.96 E-value=0.0043 Score=65.62 Aligned_cols=120 Identities=14% Similarity=0.022 Sum_probs=78.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.+++.+.++.|++.|+++.++|+.....+..+-+.+|+..- -..++.+.+.. ...-.|+-
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~--Fd~ii~~~d~~----------------~~KP~Pe~ 170 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGF--FSVVLAAEDVY----------------RGKPDPEM 170 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhh--CcEEEecccCC----------------CCCCCHHH
Confidence 4689999999999999999999999999999999999998531 11122221111 01112222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeE-Ee-cCchHHHhhhcCEEEeCCChhHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI-AV-AGATEAARGAADIVLTEPGLSVI 608 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgI-a~-~~~~~~a~~aadivl~~~~~~~i 608 (831)
=...++.++-....++||||..+|+.|-++|++-. ++ |..+......+|+++ +++..+
T Consensus 171 ~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi--~~~~el 230 (260)
T PLN03243 171 FMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVV--RRLDDL 230 (260)
T ss_pred HHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEe--CCHHHH
Confidence 23444445545567999999999999999999844 33 322222233578876 345544
No 103
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=96.91 E-value=0.0025 Score=64.73 Aligned_cols=39 Identities=28% Similarity=0.344 Sum_probs=35.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhC
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLG 507 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~g 507 (831)
++.+++.+++++|++.|++++++||+....+..+.++++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 467899999999999999999999999999999988754
No 104
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=96.84 E-value=0.0069 Score=63.68 Aligned_cols=116 Identities=11% Similarity=0.105 Sum_probs=78.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+.++.|++.|+++.++|+-....+...-+.+|+.... ..++.+.+.. ...-.|+-
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~iv~~~~~~----------------~~KP~p~~ 169 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFF--QAVIIGSECE----------------HAKPHPDP 169 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhC--cEEEecCcCC----------------CCCCChHH
Confidence 46789999999999999999999999999999999999985311 1122221111 11122333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEe---cCc-hHHHhhhcCEEEeC
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV---AGA-TEAARGAADIVLTE 602 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~---~~~-~~~a~~aadivl~~ 602 (831)
-....+.++-..+.++|+||..+|+.|-++|++-... |.. .+.....+|+++.+
T Consensus 170 ~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~ 227 (248)
T PLN02770 170 YLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD 227 (248)
T ss_pred HHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc
Confidence 3444555554556799999999999999999886432 321 22233468888754
No 105
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.69 E-value=0.0022 Score=64.84 Aligned_cols=94 Identities=17% Similarity=0.059 Sum_probs=66.7
Q ss_pred cCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeCh
Q 003313 467 FDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFA 546 (831)
Q Consensus 467 ~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P 546 (831)
.+++.+++.++++.|++.|+++.++||.....+..+.+.+|+..-. ..++...+ +..+-.|
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~~~~~~~-----------------~~~KP~p 164 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF--PVQIWMED-----------------CPPKPNP 164 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC--CEEEeecC-----------------CCCCcCH
Confidence 3456778899999999999999999999999999999999985311 11111111 1112334
Q ss_pred HHHHHHHHHHhhcCCEEEEEcCCccChhhhccC
Q 003313 547 EHKYEIVKILQEKKHVVGMTGDGVNDAPALKKA 579 (831)
Q Consensus 547 ~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~A 579 (831)
+--...++.++-..+.++||||+.+|+.|-++|
T Consensus 165 ~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 165 EPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 444555666665667899999999999886654
No 106
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.64 E-value=0.0023 Score=61.37 Aligned_cols=112 Identities=13% Similarity=0.070 Sum_probs=72.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
.++|+-++.++.+++.+++++++|+-.......+-+.++=........++..+..-..+.. -.+... ....-..+
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~--h~i~~~---~ds~fG~d 147 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQ--HSIKYT---DDSQFGHD 147 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCc--eeeecC---CccccCCC
Confidence 4789999999999999999999999887777777666651111111111111100000000 000000 01122357
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEe
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV 585 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~ 585 (831)
|...|+.+++..+.+.++|||+.|.+|-+.+|+=.|=
T Consensus 148 K~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 148 KSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred cchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 9999999999999999999999999998888776653
No 107
>PRK06769 hypothetical protein; Validated
Probab=96.64 E-value=0.0075 Score=59.60 Aligned_cols=99 Identities=8% Similarity=-0.059 Sum_probs=59.7
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHH--------HHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcE
Q 003313 470 PRHDSSDTIHRALKLGVCVKMITGDHLA--------IAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGF 541 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~v~m~TGD~~~--------~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 541 (831)
+.|++.+++++|++.|+++.++|+.... ......+..|+..-.. .....+.+. -.
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~-~~~~~~~~~----------------~~ 91 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYL-CPHKHGDGC----------------EC 91 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEE-CcCCCCCCC----------------CC
Confidence 6799999999999999999999987631 1223334455532100 000000000 01
Q ss_pred EEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEe
Q 003313 542 TDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV 585 (831)
Q Consensus 542 ~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~ 585 (831)
.+-.|+-=.+.++.+....+.+.||||..+|+.+-++|++-...
T Consensus 92 ~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~ 135 (173)
T PRK06769 92 RKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTIL 135 (173)
T ss_pred CCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEE
Confidence 11222222444555544456799999999999999999886554
No 108
>PRK11587 putative phosphatase; Provisional
Probab=96.54 E-value=0.0099 Score=61.12 Aligned_cols=114 Identities=14% Similarity=0.121 Sum_probs=72.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+.++.|+++|+++.++|+.....+...-+..|+.. ...++.+.+.. ...-.|+-
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~---~~~i~~~~~~~----------------~~KP~p~~ 143 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA---PEVFVTAERVK----------------RGKPEPDA 143 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC---ccEEEEHHHhc----------------CCCCCcHH
Confidence 478999999999999999999999988776666666677631 11111111000 11122333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCee-EEecCch-HHHhhhcCEEEe
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG-IAVAGAT-EAARGAADIVLT 601 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Advg-Ia~~~~~-~~a~~aadivl~ 601 (831)
=....+.+.-..+.++||||..+|+.+-+.|++- |++..+. ......+|+++.
T Consensus 144 ~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 144 YLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLH 198 (218)
T ss_pred HHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEec
Confidence 3344444544567899999999999999999984 5554332 222345777763
No 109
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=96.51 E-value=0.0091 Score=61.40 Aligned_cols=98 Identities=18% Similarity=0.149 Sum_probs=66.3
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeCh--
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFA-- 546 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P-- 546 (831)
++.|++.++++.|++.|+++.++|+-+...+....+.+|+.... ..++.+.+ ..+..|
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~------------------~~~~KP~~ 153 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF--DAVITSEE------------------EGVEKPHP 153 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc--cEEEEecc------------------CCCCCCCH
Confidence 47899999999999999999999999888888888888874311 11111111 111122
Q ss_pred HHHHHHHHHHhhcCCEEEEEcCCc-cChhhhccCCee-EEec
Q 003313 547 EHKYEIVKILQEKKHVVGMTGDGV-NDAPALKKADIG-IAVA 586 (831)
Q Consensus 547 ~~K~~iv~~l~~~g~~v~~iGDG~-ND~~al~~Advg-Ia~~ 586 (831)
+-=....+.+.-....++++||.. +|+.+-++|++- |.+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 154 KIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 222333344443456799999998 999999999874 4444
No 110
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=96.49 E-value=0.0088 Score=68.90 Aligned_cols=123 Identities=12% Similarity=0.063 Sum_probs=80.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.||+.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.+.. ..-.|+-
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f--~~i~~~d~v~-----------------~~~kP~~ 390 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV--TETFSIEQIN-----------------SLNKSDL 390 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc--ceeEecCCCC-----------------CCCCcHH
Confidence 67899999999999999999999999999999999999985311 1122111110 0112221
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCee-EEec--CchHHHhhhcCEEEeCCChhHHHHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG-IAVA--GATEAARGAADIVLTEPGLSVICSAVLT 614 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Advg-Ia~~--~~~~~a~~aadivl~~~~~~~i~~~i~~ 614 (831)
=....+.+ ..+.+.++||+.+|+.+-+.|++- |++. .+.+.....+|+++ +++..+...+..
T Consensus 391 ~~~al~~l--~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~ 455 (459)
T PRK06698 391 VKSILNKY--DIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILST 455 (459)
T ss_pred HHHHHHhc--CcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHH
Confidence 12222222 235699999999999999999974 3442 22222234588887 557777666543
No 111
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.48 E-value=0.0052 Score=63.58 Aligned_cols=90 Identities=21% Similarity=0.233 Sum_probs=62.3
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCC----HHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEe
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDH----LAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDV 544 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~----~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 544 (831)
.+.+++++.++.+++.|+++.++||+. ..++..+.+..|++.......++.+...
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--------------------- 172 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--------------------- 172 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC---------------------
Confidence 366789999999999999999999964 5688899988999422111111211100
Q ss_pred ChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeE
Q 003313 545 FAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI 583 (831)
Q Consensus 545 ~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgI 583 (831)
.-.+|... +++.+ .++|+||..+|..+-++|++-.
T Consensus 173 ~K~~K~~~---l~~~~-i~I~IGDs~~Di~aA~~AGi~~ 207 (237)
T PRK11009 173 GQYTKTQW---LKKKN-IRIFYGDSDNDITAAREAGARG 207 (237)
T ss_pred CCCCHHHH---HHhcC-CeEEEcCCHHHHHHHHHcCCcE
Confidence 01234443 33444 4889999999999999998753
No 112
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=96.44 E-value=0.0097 Score=63.93 Aligned_cols=117 Identities=16% Similarity=0.082 Sum_probs=71.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+.++.|++.|+++.++|+-+......+-+..+...-......+.+.+.. ..+-.|+-
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~----------------~~KP~p~~ 207 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVP----------------KKKPDPDI 207 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccC----------------CCCCCHHH
Confidence 57899999999999999999999998887777665554321100000111111000 01112222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEec-Cc--hHHHhhhcCEEEe
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVA-GA--TEAARGAADIVLT 601 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~-~~--~~~a~~aadivl~ 601 (831)
=..+.+.+.-....++||||+.+|+.|-++|++....- .| +......+|+++.
T Consensus 208 ~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~ 263 (286)
T PLN02779 208 YNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFD 263 (286)
T ss_pred HHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEEC
Confidence 23444555445567999999999999999999876542 22 2111235788873
No 113
>PLN02580 trehalose-phosphatase
Probab=96.37 E-value=0.03 Score=61.81 Aligned_cols=68 Identities=24% Similarity=0.206 Sum_probs=48.7
Q ss_pred EEEeChH---HHHHHHHHHhhc-C-----C-EEEEEcCCccChhhhcc-----CCeeEEecCchHHHhhhcCEEEeCCCh
Q 003313 541 FTDVFAE---HKYEIVKILQEK-K-----H-VVGMTGDGVNDAPALKK-----ADIGIAVAGATEAARGAADIVLTEPGL 605 (831)
Q Consensus 541 ~~~~~P~---~K~~iv~~l~~~-g-----~-~v~~iGDG~ND~~al~~-----AdvgIa~~~~~~~a~~aadivl~~~~~ 605 (831)
+.++.|. +|..-++.+.+. | . .++++||+.||..||+. +++||+|++|.+.. .|++.+. +.
T Consensus 291 vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~t--~A~y~L~--dp 366 (384)
T PLN02580 291 VLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKES--NAFYSLR--DP 366 (384)
T ss_pred EEEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCCc--cceEEcC--CH
Confidence 3455663 788888777653 2 1 25899999999999995 69999999766433 5788874 46
Q ss_pred hHHHHHH
Q 003313 606 SVICSAV 612 (831)
Q Consensus 606 ~~i~~~i 612 (831)
..+...+
T Consensus 367 ~eV~~~L 373 (384)
T PLN02580 367 SEVMEFL 373 (384)
T ss_pred HHHHHHH
Confidence 6666555
No 114
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.29 E-value=0.0045 Score=64.14 Aligned_cols=88 Identities=22% Similarity=0.262 Sum_probs=60.4
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCC----CHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeC
Q 003313 470 PRHDSSDTIHRALKLGVCVKMITGD----HLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVF 545 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~v~m~TGD----~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 545 (831)
+.+++.+.++.++++|+++.++|+. ...++..+.+.+|+.... ..+.+.+... .-.
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f---~~i~~~d~~~-----------------~~K 174 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMN---PVIFAGDKPG-----------------QYQ 174 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchhe---eEEECCCCCC-----------------CCC
Confidence 4445999999999999999999998 667899999999996311 1221111100 001
Q ss_pred hHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCee
Q 003313 546 AEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG 582 (831)
Q Consensus 546 P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Advg 582 (831)
| +|. ..+++.+ .++|+||..||..+-++|++-
T Consensus 175 p-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 175 Y-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred C-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 1 232 2344444 478999999999999988764
No 115
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=96.22 E-value=0.028 Score=55.92 Aligned_cols=128 Identities=20% Similarity=0.091 Sum_probs=71.3
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHL---------------AIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDE 533 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (831)
.+.||+.+++++|++.|+++.++|..+. .....+-+..|+.. ..++....... +.
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f----~~i~~~~~~~~---~~--- 98 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRL----DGIYYCPHHPE---DG--- 98 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCcc----ceEEECCCCCC---CC---
Confidence 3679999999999999999999998762 11122233445421 01110000000 00
Q ss_pred HHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEE-ecCch--H-HHhhhc--CEEEeCCChhH
Q 003313 534 LIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA-VAGAT--E-AARGAA--DIVLTEPGLSV 607 (831)
Q Consensus 534 ~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa-~~~~~--~-~a~~aa--divl~~~~~~~ 607 (831)
.-..+-.|+--...++.+.-..+.++||||+.+|+.+-++|++..- +..|. . .....+ |.++ +++..
T Consensus 99 -----~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~e 171 (181)
T PRK08942 99 -----CDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLAD 171 (181)
T ss_pred -----CcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHHH
Confidence 0011222333344555555556789999999999999999997432 22222 1 112234 7776 45666
Q ss_pred HHHHHH
Q 003313 608 ICSAVL 613 (831)
Q Consensus 608 i~~~i~ 613 (831)
+.+.+.
T Consensus 172 l~~~l~ 177 (181)
T PRK08942 172 LPQALK 177 (181)
T ss_pred HHHHHH
Confidence 665543
No 116
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=96.20 E-value=0.012 Score=63.71 Aligned_cols=109 Identities=14% Similarity=0.011 Sum_probs=76.0
Q ss_pred ccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeC
Q 003313 466 LFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVF 545 (831)
Q Consensus 466 ~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 545 (831)
..+++.+++.++++.|++.|++++++||.....+..+.+.+|+.....+ .+.+.+. ....+.... -.+-.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~--~i~~~~~-------~~~~~~~~~-~~kp~ 253 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFD--DLIGRPP-------DMHFQREQG-DKRPD 253 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchh--hhhCCcc-------hhhhcccCC-CCCCc
Confidence 5678999999999999999999999999999999999999988531111 1111110 000000000 11334
Q ss_pred hHHHHHHHHHHhh-cCCEEEEEcCCccChhhhccCCeeEE
Q 003313 546 AEHKYEIVKILQE-KKHVVGMTGDGVNDAPALKKADIGIA 584 (831)
Q Consensus 546 P~~K~~iv~~l~~-~g~~v~~iGDG~ND~~al~~AdvgIa 584 (831)
|+-+...++.+.. ....++|+||..+|+.+-+.|++-..
T Consensus 254 p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i 293 (300)
T PHA02530 254 DVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECW 293 (300)
T ss_pred HHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEE
Confidence 5667777766544 34789999999999999999998743
No 117
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=96.15 E-value=0.014 Score=58.93 Aligned_cols=96 Identities=15% Similarity=0.126 Sum_probs=66.1
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChH-
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAE- 547 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~- 547 (831)
++.|++.+++++|++.|+++.++|+-+........+.+|+.... ..++...+ .....|.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f--d~i~~s~~------------------~~~~KP~~ 151 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF--DAVLSADA------------------VRAYKPAP 151 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh--heeEehhh------------------cCCCCCCH
Confidence 47799999999999999999999999988888888889974211 11111110 0111222
Q ss_pred -HHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEE
Q 003313 548 -HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA 584 (831)
Q Consensus 548 -~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa 584 (831)
-=....+.+.-..+.++++||+.+|+.+-++|++-..
T Consensus 152 ~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i 189 (198)
T TIGR01428 152 QVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTA 189 (198)
T ss_pred HHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEE
Confidence 1133444444445679999999999999998887543
No 118
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.06 E-value=0.028 Score=52.64 Aligned_cols=93 Identities=15% Similarity=0.117 Sum_probs=63.8
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCC--------HHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcC
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDH--------LAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKAD 539 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~--------~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (831)
-++.+++.++++.|+++|+++.++|+.. ......+.+.+|+.... ....+ .
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~-~----------------- 82 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV---LYACP-H----------------- 82 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE---EEECC-C-----------------
Confidence 3578999999999999999999999998 77778888888874210 00000 0
Q ss_pred cEEEeChHHHHHHHHHHh-hcCCEEEEEcC-CccChhhhccCCee
Q 003313 540 GFTDVFAEHKYEIVKILQ-EKKHVVGMTGD-GVNDAPALKKADIG 582 (831)
Q Consensus 540 v~~~~~P~~K~~iv~~l~-~~g~~v~~iGD-G~ND~~al~~Advg 582 (831)
..+-.|+-=..+++.++ -..+.++|+|| ..+|+.+-+.|++-
T Consensus 83 -~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 83 -CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred -CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 00112222234455552 45567999999 59999999888764
No 119
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=96.04 E-value=0.015 Score=60.17 Aligned_cols=101 Identities=13% Similarity=0.021 Sum_probs=66.5
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+.++.|+++|+++.++|+-+...+...-+..|+..- . ..++.+.+.. ...-.|+-
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~-f-d~iv~s~~~~----------------~~KP~p~~ 154 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAH-L-DLLLSTHTFG----------------YPKEDQRL 154 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHH-C-CEEEEeeeCC----------------CCCCCHHH
Confidence 5789999999999999999999999888888877777887421 1 1111111100 00111221
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCee--EEecC
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG--IAVAG 587 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Advg--Ia~~~ 587 (831)
=....+.+.-..+.++|+||..+|+.+-++|++. +++.+
T Consensus 155 ~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~ 195 (224)
T PRK14988 155 WQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTN 195 (224)
T ss_pred HHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeC
Confidence 1233344444456799999999999999999996 34443
No 120
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=95.99 E-value=0.034 Score=61.47 Aligned_cols=120 Identities=15% Similarity=0.110 Sum_probs=79.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.+|+.+.++.|+++|+++.++|+.....+..+-+..||..-. ..++.+.+.. ...-.|+-
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yF--d~Iv~sddv~----------------~~KP~Pei 277 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFF--SVIVAAEDVY----------------RGKPDPEM 277 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHc--eEEEecCcCC----------------CCCCCHHH
Confidence 46799999999999999999999999999999999999985310 1111111100 01112222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEe-cCchHHH-hhhcCEEEeCCChhHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV-AGATEAA-RGAADIVLTEPGLSVI 608 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~-~~~~~~a-~~aadivl~~~~~~~i 608 (831)
=...++.++-....++|+||..+|+.|-+.|++-... .++.+.. ...||+++ +++..+
T Consensus 278 fl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI--~s~~EL 337 (381)
T PLN02575 278 FIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVV--RRLDEL 337 (381)
T ss_pred HHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEE--CCHHHH
Confidence 2344555555567899999999999999999986443 2322222 23578876 445544
No 121
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=95.94 E-value=0.033 Score=54.05 Aligned_cols=104 Identities=12% Similarity=0.114 Sum_probs=65.4
Q ss_pred cCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHH---HHHHHh---C--CCCCCCCCccccCCcCCCCCcccHHHHHHhc
Q 003313 467 FDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAK---ETGRRL---G--IGTNMYPSSLLLGRDKDENEALPVDELIEKA 538 (831)
Q Consensus 467 ~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~---~ia~~~---g--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (831)
+|.+.+++.+++++++++|++++.+||+....+. ...+++ | ++. ..++.... ..... ..+
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~----g~li~~~g------~~~~~-~~~- 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH----GPVLLSPD------RLFAA-LHR- 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC----ceEEEcCC------cchhh-hhc-
Confidence 4678899999999999999999999999988774 444442 2 321 01110000 00000 000
Q ss_pred CcEEEeChHHHHHHHHHHhh-----cCCEEEEEcCCccChhhhccCCee
Q 003313 539 DGFTDVFAEHKYEIVKILQE-----KKHVVGMTGDGVNDAPALKKADIG 582 (831)
Q Consensus 539 ~v~~~~~P~~K~~iv~~l~~-----~g~~v~~iGDG~ND~~al~~Advg 582 (831)
.+..+-.-+.|...++.+++ ....++.+||+.+|+.+.+++++-
T Consensus 93 e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 93 EVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred ccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 11222222348777777776 346778899999999999887764
No 122
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=95.90 E-value=0.023 Score=58.35 Aligned_cols=121 Identities=11% Similarity=0.048 Sum_probs=74.8
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+.+++|++. +++.++|+-....+..+.+++|+..-. ..++...+.. ..+-.|+-
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f--d~i~~~~~~~----------------~~KP~~~~ 157 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF--DDIFVSEDAG----------------IQKPDKEI 157 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc--CEEEEcCccC----------------CCCCCHHH
Confidence 5789999999999999 999999999888888888888885311 1111111100 01111221
Q ss_pred HHHHHHHH-hhcCCEEEEEcCCc-cChhhhccCCee-EEe--cCchHHHhhhcCEEEeCCChhHHHH
Q 003313 549 KYEIVKIL-QEKKHVVGMTGDGV-NDAPALKKADIG-IAV--AGATEAARGAADIVLTEPGLSVICS 610 (831)
Q Consensus 549 K~~iv~~l-~~~g~~v~~iGDG~-ND~~al~~Advg-Ia~--~~~~~~a~~aadivl~~~~~~~i~~ 610 (831)
=...++.+ .-..+.+++|||+. +|+.+-+.+++- |.. +..++.....+|.++ +++..+..
T Consensus 158 ~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~ 222 (224)
T TIGR02254 158 FNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYE 222 (224)
T ss_pred HHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHh
Confidence 23344444 33345699999998 899999999973 333 222222223466666 44555543
No 123
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=95.88 E-value=0.0073 Score=59.00 Aligned_cols=96 Identities=16% Similarity=0.167 Sum_probs=67.8
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.+++.+.+++|++.|++++++|+.+........+++|+... ...++...+.. ...-.|+-
T Consensus 77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~--f~~i~~~~~~~----------------~~Kp~~~~ 138 (176)
T PF13419_consen 77 QPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDY--FDEIISSDDVG----------------SRKPDPDA 138 (176)
T ss_dssp EESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGG--CSEEEEGGGSS----------------SSTTSHHH
T ss_pred chhhhhhhhhhhcccccceeEEeecCCcccccccccccccccc--cccccccchhh----------------hhhhHHHH
Confidence 5778999999999999999999999999999999999998521 11222111111 00111222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCee
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG 582 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Advg 582 (831)
=..+++.+.-..+.+.+|||+.+|+.+-+.|++-
T Consensus 139 ~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 139 YRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 2345555555567899999999999999988864
No 124
>PTZ00174 phosphomannomutase; Provisional
Probab=95.80 E-value=0.0066 Score=63.77 Aligned_cols=58 Identities=24% Similarity=0.334 Sum_probs=48.3
Q ss_pred EeCh--HHHHHHHHHHhhcCCEEEEEcC----CccChhhhccC-CeeEEecCchHHHhhhcCEEE
Q 003313 543 DVFA--EHKYEIVKILQEKKHVVGMTGD----GVNDAPALKKA-DIGIAVAGATEAARGAADIVL 600 (831)
Q Consensus 543 ~~~P--~~K~~iv~~l~~~g~~v~~iGD----G~ND~~al~~A-dvgIa~~~~~~~a~~aadivl 600 (831)
++.| .+|..-++.+.+..+.|+++|| |.||.+||+.| -.|++++++.+..|..+.+++
T Consensus 181 eI~~~gvsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 181 DVFPKGWDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred EeeeCCCcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 4444 4799999999887889999999 99999999977 688888899999998776543
No 125
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=95.79 E-value=0.013 Score=58.29 Aligned_cols=94 Identities=11% Similarity=-0.023 Sum_probs=59.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.++++.|+++|+++.++|+... +....+.+|+.... ..++.+.+.. ..+-.|+-
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f--~~~~~~~~~~----------------~~kp~p~~ 146 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF--DAIVDPAEIK----------------KGKPDPEI 146 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC--cEEEehhhcC----------------CCCCChHH
Confidence 5779999999999999999999997532 35567777874211 1111111000 11112222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCee
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG 582 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Advg 582 (831)
=....+.+.-..+.+.||||..+|+.+-+.|++-
T Consensus 147 ~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 147 FLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 2233333333345699999999999999999875
No 126
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=95.65 E-value=0.031 Score=55.28 Aligned_cols=94 Identities=14% Similarity=0.060 Sum_probs=62.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+.+++|++.|+++.++|+-.... ..+..++|+.... ..++.+.+.. ...-.|+-
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f--~~i~~~~~~~----------------~~KP~~~~ 145 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLF--DVVIFSGDVG----------------RGKPDPDI 145 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHC--CEEEEcCCCC----------------CCCCCHHH
Confidence 578999999999999999999999988777 5555558874310 1111111100 11112222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCe
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADI 581 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Adv 581 (831)
=..+.+.+......+.++||...|+.+-+++++
T Consensus 146 ~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 146 YLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 334445554456789999999999999888887
No 127
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=95.63 E-value=0.017 Score=57.45 Aligned_cols=92 Identities=12% Similarity=0.096 Sum_probs=60.3
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChH-
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAE- 547 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~- 547 (831)
++.|++.++++.|++.|+++.++|+. ..+..+-+.+|+..-. ..++...+ ..+..|.
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f--~~v~~~~~------------------~~~~kp~~ 145 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF--DAIVDADE------------------VKEGKPHP 145 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC--CEeeehhh------------------CCCCCCCh
Confidence 57899999999999999999999987 5567777788874210 11111100 0011221
Q ss_pred -HHHHHHHHHhhcCCEEEEEcCCccChhhhccCCee
Q 003313 548 -HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG 582 (831)
Q Consensus 548 -~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Advg 582 (831)
-=....+.+....+.+.+|||+.+|+.+-++|++.
T Consensus 146 ~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 146 ETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred HHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 11223333333446689999999999999998875
No 128
>PLN02940 riboflavin kinase
Probab=95.44 E-value=0.039 Score=61.80 Aligned_cols=114 Identities=15% Similarity=0.081 Sum_probs=71.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH-HhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGR-RLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAE 547 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~ 547 (831)
++.|++.+.++.|++.|+++.++|+.....+....+ ..|+.... ..++.+.+.. ...-.|+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F--d~ii~~d~v~----------------~~KP~p~ 154 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF--SVIVGGDEVE----------------KGKPSPD 154 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC--CEEEehhhcC----------------CCCCCHH
Confidence 467999999999999999999999998887776654 56763210 1111111000 1111222
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEe-cCc--hHHHhhhcCEEE
Q 003313 548 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV-AGA--TEAARGAADIVL 600 (831)
Q Consensus 548 ~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~-~~~--~~~a~~aadivl 600 (831)
-=...++.+.-..+.++|+||+.+|+.+-++|++.... ..+ .+.....+|.++
T Consensus 155 ~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i 210 (382)
T PLN02940 155 IFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVI 210 (382)
T ss_pred HHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEe
Confidence 22344444444567799999999999999999987433 322 222333466665
No 129
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=95.38 E-value=0.061 Score=52.95 Aligned_cols=111 Identities=13% Similarity=0.057 Sum_probs=71.7
Q ss_pred HHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHhCCC
Q 003313 431 LAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDH-LAIAKETGRRLGIG 509 (831)
Q Consensus 431 ~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~-~~~a~~ia~~~gi~ 509 (831)
+.+.|.+.+.+-.++ ++.-- =...+.+++.+++++|++.|+++.++|+.+ ...+..+.+.+|+.
T Consensus 20 ~~~~~v~~vv~D~Dg-------------tl~~~--~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~ 84 (170)
T TIGR01668 20 LKKVGIKGVVLDKDN-------------TLVYP--DHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIP 84 (170)
T ss_pred HHHCCCCEEEEecCC-------------ccccC--CCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCE
Confidence 345788888776543 11100 123577999999999999999999999988 56777777888763
Q ss_pred CCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCc-cChhhhccCCeeE
Q 003313 510 TNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGV-NDAPALKKADIGI 583 (831)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~-ND~~al~~AdvgI 583 (831)
.. .+ ...-.|+-=..+.+.+.-..+.++||||.. .|..+-+.|++-.
T Consensus 85 ~~-------~~--------------------~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~ 132 (170)
T TIGR01668 85 VL-------PH--------------------AVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYT 132 (170)
T ss_pred EE-------cC--------------------CCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeE
Confidence 10 00 001112111223333333455699999998 7999999998843
No 130
>PRK09449 dUMP phosphatase; Provisional
Probab=95.35 E-value=0.059 Score=55.49 Aligned_cols=123 Identities=15% Similarity=0.101 Sum_probs=74.1
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.++++.|+ +|+++.++|+.....+...-+..|+.... ..++...+.. ...-.|+-
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~~~----------------~~KP~p~~ 155 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF--DLLVISEQVG----------------VAKPDVAI 155 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc--CEEEEECccC----------------CCCCCHHH
Confidence 46799999999999 68999999998888888877888874210 1111111000 00111111
Q ss_pred HHHHHHHHhhc-CCEEEEEcCCc-cChhhhccCCee-EEec-CchH-HHhhhcCEEEeCCChhHHHHHH
Q 003313 549 KYEIVKILQEK-KHVVGMTGDGV-NDAPALKKADIG-IAVA-GATE-AARGAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 549 K~~iv~~l~~~-g~~v~~iGDG~-ND~~al~~Advg-Ia~~-~~~~-~a~~aadivl~~~~~~~i~~~i 612 (831)
=...++.+.-. .+.+.+|||.. +|+.+-++|++- |.+. .+.. .....+|+++ +++..+...+
T Consensus 156 ~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 156 FDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred HHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 12333444322 25799999998 799999999985 3433 2221 1112467776 4566666543
No 131
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=95.34 E-value=0.067 Score=52.98 Aligned_cols=125 Identities=15% Similarity=0.071 Sum_probs=65.5
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHH---------------HHHHHHHHhCCCCCCCCCccccCC-cCCCCCcccHHH
Q 003313 470 PRHDSSDTIHRALKLGVCVKMITGDHLA---------------IAKETGRRLGIGTNMYPSSLLLGR-DKDENEALPVDE 533 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~v~m~TGD~~~---------------~a~~ia~~~gi~~~~~~~~~~~~~-~~~~~~~~~~~~ 533 (831)
+.|++.+++++|+++|+++.++|.-+.. ....+..+.|+... .++... .... ...+.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~i~~~~~~~~~--~~~~~- 99 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLD----GIYYCPHHPEG--VEEFR- 99 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCcc----EEEECCCCCcc--ccccc-
Confidence 5689999999999999999999986631 11122333333210 000000 0000 00000
Q ss_pred HHHhcCcEEEeCh--HHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeE--EecCch---HHHhhhcCEEEeCCChh
Q 003313 534 LIEKADGFTDVFA--EHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI--AVAGAT---EAARGAADIVLTEPGLS 606 (831)
Q Consensus 534 ~~~~~~v~~~~~P--~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgI--a~~~~~---~~a~~aadivl~~~~~~ 606 (831)
.-.....| +-=....+.+.-....++||||..+|+.+-++|++.. .+..|. ......+|+++. ++.
T Consensus 100 -----~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~--~~~ 172 (176)
T TIGR00213 100 -----QVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLN--SLA 172 (176)
T ss_pred -----CCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEec--cHH
Confidence 00001122 2212333333334567899999999999999999853 443332 112234888873 444
Q ss_pred HH
Q 003313 607 VI 608 (831)
Q Consensus 607 ~i 608 (831)
.+
T Consensus 173 el 174 (176)
T TIGR00213 173 DL 174 (176)
T ss_pred Hh
Confidence 43
No 132
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=95.21 E-value=0.075 Score=52.34 Aligned_cols=111 Identities=10% Similarity=-0.023 Sum_probs=70.6
Q ss_pred eeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhc
Q 003313 460 FCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGD-HLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKA 538 (831)
Q Consensus 460 ~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD-~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (831)
......-+-+++|++.+.++.|+++|+++.++|+- ....+..+-+.+|+...... ..+..... .
T Consensus 36 ~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~--------------~~~~~~Fd-~ 100 (174)
T TIGR01685 36 IIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKT--------------VPMHSLFD-D 100 (174)
T ss_pred EEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCc--------------ccHHHhce-e
Confidence 44445555678999999999999999999999976 88888888888887410000 00000000 0
Q ss_pred CcEEEeChHHH--HHHHHHHhh------cCCEEEEEcCCccChhhhccCCeeEEe
Q 003313 539 DGFTDVFAEHK--YEIVKILQE------KKHVVGMTGDGVNDAPALKKADIGIAV 585 (831)
Q Consensus 539 ~v~~~~~P~~K--~~iv~~l~~------~g~~v~~iGDG~ND~~al~~AdvgIa~ 585 (831)
.+.++-.+..| ..+.+.+.+ ..+.++|+||...|+.+-++|++-...
T Consensus 101 iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 101 RIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred eeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 01111111112 233444432 236799999999999999999887655
No 133
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=95.05 E-value=0.042 Score=52.66 Aligned_cols=98 Identities=17% Similarity=0.089 Sum_probs=59.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHL---------------AIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDE 533 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (831)
++.|++.++++.|++.|+++.++|+.+. ..+..+.+.+|+.....-.......+.
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~---------- 96 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADN---------- 96 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCC----------
Confidence 4689999999999999999999998762 345566677787411000000000000
Q ss_pred HHHhcCcEEEeChHH--HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeE
Q 003313 534 LIEKADGFTDVFAEH--KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI 583 (831)
Q Consensus 534 ~~~~~~v~~~~~P~~--K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgI 583 (831)
... ..|+- =..+++.+.-..+.+.||||...|+.+-+.|++-.
T Consensus 97 ------~~~-~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 97 ------CSC-RKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred ------CCC-CCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCE
Confidence 000 12211 12233333334467999999999999988888754
No 134
>PLN03017 trehalose-phosphatase
Probab=94.93 E-value=0.41 Score=52.54 Aligned_cols=61 Identities=7% Similarity=-0.031 Sum_probs=43.8
Q ss_pred HHHHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccccC--CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHH
Q 003313 429 NKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFD--PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETG 503 (831)
Q Consensus 429 ~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D--~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia 503 (831)
...++...+.+++-|++ +++-+..-.| .+-++..++|++|. .|++++++||+.......+.
T Consensus 104 ~~~~~~k~~llflD~DG-------------TL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 104 MEASRGKQIVMFLDYDG-------------TLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred HHHhcCCCeEEEEecCC-------------cCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 33444445566666665 5555544333 36788999999999 78999999999999888773
No 135
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=94.72 E-value=0.062 Score=52.35 Aligned_cols=100 Identities=14% Similarity=-0.011 Sum_probs=59.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCC---------------HHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDH---------------LAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDE 533 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~---------------~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (831)
++-|++.+++++|+++|+++.++|.-. ...+..+.+.+|+.- + ..+.+..... +
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~f---d-~ii~~~~~~~---~---- 97 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIF---D-DVLICPHFPD---D---- 97 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCce---e-EEEECCCCCC---C----
Confidence 456899999999999999999999852 345566677777741 1 1111100000 0
Q ss_pred HHHhcCcEEEeChH--HHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEe
Q 003313 534 LIEKADGFTDVFAE--HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV 585 (831)
Q Consensus 534 ~~~~~~v~~~~~P~--~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~ 585 (831)
. .....|. -=..+++.+......+.||||+.+|..+-++|++-...
T Consensus 98 -----~-~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~ 145 (161)
T TIGR01261 98 -----N-CDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQ 145 (161)
T ss_pred -----C-CCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEE
Confidence 0 0001221 11222233322335699999999999999999887554
No 136
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=94.64 E-value=0.33 Score=50.71 Aligned_cols=94 Identities=14% Similarity=0.159 Sum_probs=59.5
Q ss_pred eeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHH--HHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcC
Q 003313 462 GLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAK--ETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKAD 539 (831)
Q Consensus 462 G~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~--~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (831)
|.+.-.+.+-|++.+++++|+++|+++.++|.-....+. ...+++|+..+.. ..+
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~-~~I---------------------- 73 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLP-EMI---------------------- 73 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCcccc-ceE----------------------
Confidence 555566788999999999999999999999996554433 4557788753110 111
Q ss_pred cEEEeChHHHHHHHHHHhh---cCCEEEEEcCCccChhhhccCC
Q 003313 540 GFTDVFAEHKYEIVKILQE---KKHVVGMTGDGVNDAPALKKAD 580 (831)
Q Consensus 540 v~~~~~P~~K~~iv~~l~~---~g~~v~~iGDG~ND~~al~~Ad 580 (831)
++.- ......+.+.+++ .+..+.++||+.+|...+..++
T Consensus 74 -i~s~-~~~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 74 -ISSG-EIAVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred -EccH-HHHHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 1110 0001122222232 3567999999999998886544
No 137
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=94.59 E-value=0.14 Score=53.88 Aligned_cols=85 Identities=15% Similarity=0.099 Sum_probs=57.4
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHH---HHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEe
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLA---IAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDV 544 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~---~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 544 (831)
.++-|++.+.++.+++.|+++.++|+.... .+...-+..|+..... .. ++.+-
T Consensus 117 a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~-d~-----------------------lllr~ 172 (266)
T TIGR01533 117 AKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADE-EH-----------------------LLLKK 172 (266)
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCc-ce-----------------------EEeCC
Confidence 456799999999999999999999998743 3345556778853211 11 12221
Q ss_pred ChHHHHHHHHHHhhcCCEEEEEcCCccChhhh
Q 003313 545 FAEHKYEIVKILQEKKHVVGMTGDGVNDAPAL 576 (831)
Q Consensus 545 ~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al 576 (831)
....|..-.+.+.+...+++++||-.+|....
T Consensus 173 ~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 173 DKSSKESRRQKVQKDYEIVLLFGDNLLDFDDF 204 (266)
T ss_pred CCCCcHHHHHHHHhcCCEEEEECCCHHHhhhh
Confidence 11235455555555667899999999998654
No 138
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=94.48 E-value=0.042 Score=52.90 Aligned_cols=90 Identities=19% Similarity=0.170 Sum_probs=57.1
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHH
Q 003313 470 PRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHK 549 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K 549 (831)
..+++.+.++.|++.|+++.++|+-....+....+.. +... . ..++...+ +..+-.|+-=
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~-f-~~i~~~~~-----------------~~~Kp~~~~~ 124 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY-F-DLILGSDE-----------------FGAKPEPEIF 124 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc-C-cEEEecCC-----------------CCCCcCHHHH
Confidence 4479999999999999999999999988888877765 3211 0 11111000 0111122222
Q ss_pred HHHHHHHhhcCCEEEEEcCCccChhhhccCC
Q 003313 550 YEIVKILQEKKHVVGMTGDGVNDAPALKKAD 580 (831)
Q Consensus 550 ~~iv~~l~~~g~~v~~iGDG~ND~~al~~Ad 580 (831)
..+.+.+.-.. .++++||..+|+.+-++|+
T Consensus 125 ~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 125 LAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 33333343334 7999999999998877764
No 139
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=94.38 E-value=0.21 Score=61.46 Aligned_cols=68 Identities=9% Similarity=0.078 Sum_probs=48.2
Q ss_pred HHHHHHHHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccccCCCCCChHHHHHHH-HhCCCeEEEEcCCCHHHHHHHH
Q 003313 425 HEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRA-LKLGVCVKMITGDHLAIAKETG 503 (831)
Q Consensus 425 ~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l-~~~Gi~v~m~TGD~~~~a~~ia 503 (831)
+.....|.....|.+++-|++ |++-.-...-.+-+++.+++++| ++.|+.|+++||+...+....-
T Consensus 585 ~~i~~~y~~~~~rlI~LDyDG-------------TLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f 651 (854)
T PLN02205 585 EHIVSAYKRTTTRAILLDYDG-------------TLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWF 651 (854)
T ss_pred HHHHHHHHhhcCeEEEEecCC-------------cccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHh
Confidence 344556666667888877766 44422222235567899999997 7789999999999999887765
Q ss_pred HH
Q 003313 504 RR 505 (831)
Q Consensus 504 ~~ 505 (831)
..
T Consensus 652 ~~ 653 (854)
T PLN02205 652 SP 653 (854)
T ss_pred CC
Confidence 43
No 140
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=94.25 E-value=0.093 Score=53.09 Aligned_cols=95 Identities=12% Similarity=0.026 Sum_probs=58.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++-|++.++++.|++.|+++.++|+-... .....+.+|+.... ..++...+.. ...-.|+-
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~f--d~i~~s~~~~----------------~~KP~~~~ 165 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYF--DFVVTSYEVG----------------AEKPDPKI 165 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhc--ceEEeecccC----------------CCCCCHHH
Confidence 56799999999999999999999986543 46666777774210 1111110000 00111211
Q ss_pred HHHHHHHHhhcCCEEEEEcCCc-cChhhhccCCee
Q 003313 549 KYEIVKILQEKKHVVGMTGDGV-NDAPALKKADIG 582 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~-ND~~al~~Advg 582 (831)
=..+++.+.-....++||||+. +|+.+-++|++-
T Consensus 166 ~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 166 FQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 1233334433456799999997 899988888763
No 141
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=94.17 E-value=0.067 Score=51.32 Aligned_cols=97 Identities=14% Similarity=-0.009 Sum_probs=64.5
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChH
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAE 547 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~ 547 (831)
-++||++.+.++.|+ .++++.++|.-+...+..+-+.+|+... ....++...+.. +..|.
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~-~f~~i~~~~d~~------------------~~KP~ 103 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKY-FGYRRLFRDECV------------------FVKGK 103 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCC-EeeeEEECcccc------------------ccCCe
Confidence 357999999999999 5799999999999999999999887421 111122211110 11121
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEe
Q 003313 548 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV 585 (831)
Q Consensus 548 ~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~ 585 (831)
=.+.++.+....+.+.++||..+|..+-++|++-|..
T Consensus 104 -~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~ 140 (148)
T smart00577 104 -YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKP 140 (148)
T ss_pred -EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecC
Confidence 0111233333456899999999999988777666543
No 142
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=94.13 E-value=0.38 Score=48.00 Aligned_cols=37 Identities=16% Similarity=0.137 Sum_probs=33.7
Q ss_pred ChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 003313 473 DSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIG 509 (831)
Q Consensus 473 ~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~ 509 (831)
.+.+.+.+|+++|++|+.+|.-....-...-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 5778999999999999999999998888888999986
No 143
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=94.10 E-value=0.31 Score=50.34 Aligned_cols=104 Identities=20% Similarity=0.198 Sum_probs=65.5
Q ss_pred CCCCChHHHHHHH--HhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCc-CCCCCcccHHHHHHhcCcEEEeC
Q 003313 469 PPRHDSSDTIHRA--LKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRD-KDENEALPVDELIEKADGFTDVF 545 (831)
Q Consensus 469 ~lr~~~~~~I~~l--~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~ 545 (831)
|+-|+.+++++.+ ++.|+.++++|--|...-..+-+.-|+.... .++..... .+..-...+...- .+-+.++.
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f--~~I~TNpa~~~~~G~l~v~pyh--~h~C~~C~ 146 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCF--SEIFTNPACFDADGRLRVRPYH--SHGCSLCP 146 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcccc--ceEEeCCceecCCceEEEeCcc--CCCCCcCC
Confidence 5778999999999 5689999999999999888898888885321 01111100 0000000000000 01233444
Q ss_pred h-HHHHHHHHHHhhc----C---CEEEEEcCCccCh-hhh
Q 003313 546 A-EHKYEIVKILQEK----K---HVVGMTGDGVNDA-PAL 576 (831)
Q Consensus 546 P-~~K~~iv~~l~~~----g---~~v~~iGDG~ND~-~al 576 (831)
| -=|..+++.+++. | ..|.++|||.||. |++
T Consensus 147 ~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~ 186 (234)
T PF06888_consen 147 PNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPAL 186 (234)
T ss_pred CccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCccc
Confidence 3 2588888888765 4 6899999999996 454
No 144
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=94.00 E-value=0.32 Score=46.62 Aligned_cols=110 Identities=13% Similarity=0.167 Sum_probs=76.1
Q ss_pred HHHHHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhC
Q 003313 428 INKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLG 507 (831)
Q Consensus 428 ~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~g 507 (831)
.+.+..+|.+.+.+-.++ +++..= ....-|++++=+++++++|+++.++|.-++..+...++.+|
T Consensus 20 ~~~L~~~Gikgvi~DlDN-------------TLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~ 84 (175)
T COG2179 20 PDILKAHGIKGVILDLDN-------------TLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLG 84 (175)
T ss_pred HHHHHHcCCcEEEEeccC-------------ceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcC
Confidence 456788899988776554 333321 12244677778899999999999999999999999999999
Q ss_pred CCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhh---cCCEEEEEcCCc-cChhhhccCCee
Q 003313 508 IGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQE---KKHVVGMTGDGV-NDAPALKKADIG 582 (831)
Q Consensus 508 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~---~g~~v~~iGDG~-ND~~al~~Advg 582 (831)
++. ++--..|-. ..+-+++++ ..+.|+||||.. .|+-+=+.|++=
T Consensus 85 v~f-----------------------------i~~A~KP~~-~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~ 133 (175)
T COG2179 85 VPF-----------------------------IYRAKKPFG-RAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMR 133 (175)
T ss_pred Cce-----------------------------eecccCccH-HHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcE
Confidence 863 122223332 234444444 467899999975 688776666653
No 145
>PLN02811 hydrolase
Probab=93.79 E-value=0.14 Score=52.64 Aligned_cols=101 Identities=13% Similarity=0.102 Sum_probs=58.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHH-HHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKE-TGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAE 547 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~-ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~ 547 (831)
++.|++.+.|+.|++.|+++.++||-....... ..+..|+.. . -..++.+.+.+ + -...-.|+
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~-~-f~~i~~~~~~~-------------~-~~~KP~p~ 141 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFS-L-MHHVVTGDDPE-------------V-KQGKPAPD 141 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHh-h-CCEEEECChhh-------------c-cCCCCCcH
Confidence 467999999999999999999999977653332 222223321 0 01111111000 0 00011222
Q ss_pred HHHHHHHHHh---hcCCEEEEEcCCccChhhhccCCeeEEe
Q 003313 548 HKYEIVKILQ---EKKHVVGMTGDGVNDAPALKKADIGIAV 585 (831)
Q Consensus 548 ~K~~iv~~l~---~~g~~v~~iGDG~ND~~al~~AdvgIa~ 585 (831)
-=...++.+. -..+.++||||+..|+.|-++|++-...
T Consensus 142 ~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~ 182 (220)
T PLN02811 142 IFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVM 182 (220)
T ss_pred HHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEE
Confidence 2233344443 2346799999999999999999986543
No 146
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=93.39 E-value=0.15 Score=56.11 Aligned_cols=98 Identities=14% Similarity=0.026 Sum_probs=59.5
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCC---------------CHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGD---------------HLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDE 533 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD---------------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (831)
++.|++.+++++|+++|+++.++|+- ....+..+.+..|+.. ..++.+..... +
T Consensus 30 ~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f----d~i~i~~~~~s---d---- 98 (354)
T PRK05446 30 AFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF----DEVLICPHFPE---D---- 98 (354)
T ss_pred eECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce----eeEEEeCCcCc---c----
Confidence 57899999999999999999999983 1334555666677631 11111100000 0
Q ss_pred HHHhcCcEEEeChHHHHHHHHHH----hhcCCEEEEEcCCccChhhhccCCeeEEe
Q 003313 534 LIEKADGFTDVFAEHKYEIVKIL----QEKKHVVGMTGDGVNDAPALKKADIGIAV 585 (831)
Q Consensus 534 ~~~~~~v~~~~~P~~K~~iv~~l----~~~g~~v~~iGDG~ND~~al~~AdvgIa~ 585 (831)
...++ .| |..++..+ ......+.||||+.+|..+-+.|++-...
T Consensus 99 -----~~~~r-KP--~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~ 146 (354)
T PRK05446 99 -----NCSCR-KP--KTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIR 146 (354)
T ss_pred -----cCCCC-CC--CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEE
Confidence 00011 22 22233222 22346799999999999999999887543
No 147
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=93.33 E-value=0.18 Score=51.78 Aligned_cols=99 Identities=14% Similarity=0.101 Sum_probs=65.0
Q ss_pred cCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhC---CCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEE
Q 003313 467 FDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLG---IGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTD 543 (831)
Q Consensus 467 ~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~g---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 543 (831)
+-++.+|+.+++++|+++|+++.++|..+......+-+..+ +.. ..+ ..+ + ..+...
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~-~f~-~~f-----d-------------~~~g~K 152 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTP-YFS-GYF-----D-------------TTVGLK 152 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhh-hcc-eEE-----E-------------eCcccC
Confidence 34688999999999999999999999988776666655542 211 000 000 0 001111
Q ss_pred eChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEe
Q 003313 544 VFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV 585 (831)
Q Consensus 544 ~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~ 585 (831)
-.|+-=..+++.+.-..+.++++||...|+.|-++|++-...
T Consensus 153 P~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 153 TEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred CCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 223322445555554557799999999999999999987644
No 148
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=93.14 E-value=0.13 Score=53.96 Aligned_cols=64 Identities=22% Similarity=0.177 Sum_probs=46.3
Q ss_pred ChHHHHHHHHHHhhc----CCEEEEEcCCccChhhhccC--------CeeEEecCchHHHhhhcCEEEeCCChhHHHHHH
Q 003313 545 FAEHKYEIVKILQEK----KHVVGMTGDGVNDAPALKKA--------DIGIAVAGATEAARGAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 545 ~P~~K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~A--------dvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i 612 (831)
.+.+|...++.+.++ ...++++||+.||.+|++.+ ..||+|+.|. .+..|++++. +...+...+
T Consensus 164 ~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~--~~~~A~~~~~--~~~~v~~~L 239 (244)
T TIGR00685 164 RFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS--KKTVAKFHLT--GPQQVLEFL 239 (244)
T ss_pred CCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC--cCCCceEeCC--CHHHHHHHH
Confidence 345687777666543 45799999999999999988 5888886443 4567888884 566665554
No 149
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=92.62 E-value=0.095 Score=53.87 Aligned_cols=97 Identities=10% Similarity=0.091 Sum_probs=62.1
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.+++.++++.| ++++.++|+.....+...-+..|+.... +..++.+.+.. ..+-.|+-
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F-~~~v~~~~~~~----------------~~KP~p~~ 147 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYF-PDKLFSGYDIQ----------------RWKPDPAL 147 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhC-cceEeeHHhcC----------------CCCCChHH
Confidence 4568999999998 4999999999888887777778874311 11111111100 00112222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEe
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV 585 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~ 585 (831)
=....+.+.-..+.++|+||..+|+.+-++|++.+..
T Consensus 148 ~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 148 MFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 2333344433445699999999999999999988754
No 150
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=92.57 E-value=0.52 Score=59.81 Aligned_cols=127 Identities=11% Similarity=0.091 Sum_probs=80.1
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHH
Q 003313 470 PRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHK 549 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K 549 (831)
+.|++.+.+++|+++|+++.++|+-....+...-+..|+..... ..++...+.. ...-.|+-=
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~F-d~iv~~~~~~----------------~~KP~Pe~~ 224 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMF-DAIVSADAFE----------------NLKPAPDIF 224 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHC-CEEEECcccc----------------cCCCCHHHH
Confidence 56899999999999999999999999988888888888852111 1111111110 011112222
Q ss_pred HHHHHHHhhcCCEEEEEcCCccChhhhccCCeeE-Eec---CchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 550 YEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI-AVA---GATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 550 ~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgI-a~~---~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
...++.+.-..+.+.++||..+|+.|-++|++-. ++. ...+.....+|+++.+-.--++...+.
T Consensus 225 ~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~ 292 (1057)
T PLN02919 225 LAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDILT 292 (1057)
T ss_pred HHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHHh
Confidence 3444555545667999999999999999999843 333 223334456788874432223444443
No 151
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=92.51 E-value=0.31 Score=47.69 Aligned_cols=94 Identities=10% Similarity=-0.015 Sum_probs=56.5
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHH------------HHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHh
Q 003313 470 PRHDSSDTIHRALKLGVCVKMITGDHLA------------IAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEK 537 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~v~m~TGD~~~------------~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (831)
+-|++.+++++|+++|+++.++|.-... .+..+.+.+|+.. ...+......
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~----~~ii~~~~~~------------- 105 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI----QVLAATHAGL------------- 105 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE----EEEEecCCCC-------------
Confidence 3489999999999999999999975532 3556778888742 1111111000
Q ss_pred cCcEEEeChHHHHHHHHHHh--hcCCEEEEEcCCc--------cChhhhccCCeeE
Q 003313 538 ADGFTDVFAEHKYEIVKILQ--EKKHVVGMTGDGV--------NDAPALKKADIGI 583 (831)
Q Consensus 538 ~~v~~~~~P~~K~~iv~~l~--~~g~~v~~iGDG~--------ND~~al~~AdvgI 583 (831)
...-.|+-=....+.+. -..+.+.||||.. +|..+-++|++-.
T Consensus 106 ---~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 106 ---YRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred ---CCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 00011111123333333 2335699999986 6999888887643
No 152
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=92.36 E-value=0.38 Score=44.82 Aligned_cols=39 Identities=13% Similarity=0.097 Sum_probs=34.0
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHHHhC
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGD-HLAIAKETGRRLG 507 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD-~~~~a~~ia~~~g 507 (831)
++.+++.+.++.|+++|+++.++|+- ....+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68899999999999999999999999 6777767666666
No 153
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=92.09 E-value=0.53 Score=48.34 Aligned_cols=88 Identities=18% Similarity=0.286 Sum_probs=54.5
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHH---HHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEe
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAI---AKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDV 544 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 544 (831)
-|.-|++.++++.+++.|++|+++||+.... +..--++.|++. ...-.+.+.+.. ..-
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~--~~~LiLR~~~d~-----------------~~~ 179 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTG--WKHLILRGLEDS-----------------NKT 179 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCC--cCeeeecCCCCC-----------------Cch
Confidence 3677899999999999999999999999755 333334567642 111111110000 000
Q ss_pred ChHHHHHHHHHHhhcC-CEEEEEcCCccChh
Q 003313 545 FAEHKYEIVKILQEKK-HVVGMTGDGVNDAP 574 (831)
Q Consensus 545 ~P~~K~~iv~~l~~~g-~~v~~iGDG~ND~~ 574 (831)
.-+-|.+.-+.+.+.| .+++.+||-.+|..
T Consensus 180 ~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 180 VVTYKSEVRKSLMEEGYRIWGNIGDQWSDLL 210 (229)
T ss_pred HhHHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence 0112666666666665 46888999998874
No 154
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=91.50 E-value=0.92 Score=45.43 Aligned_cols=104 Identities=23% Similarity=0.230 Sum_probs=66.1
Q ss_pred CCCCChHHHHHHHHhCCC-eEEEEcCCCHHHHHHHHHHhCCCC-------CCC---CCccccCCcCCCCCcccHHHHHHh
Q 003313 469 PPRHDSSDTIHRALKLGV-CVKMITGDHLAIAKETGRRLGIGT-------NMY---PSSLLLGRDKDENEALPVDELIEK 537 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi-~v~m~TGD~~~~a~~ia~~~gi~~-------~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 537 (831)
|+-|+..++|+.+++.|- .++++|--|.-....+-+..|+.. |.. ....+.-...- .
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH------------~ 151 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYH------------T 151 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCC------------C
Confidence 667999999999999997 899999999887777777777632 100 00000000000 0
Q ss_pred cCcEEEeChHH--HHHHHHHHhhc-------CCEEEEEcCCccCh-hhhccCCeeEEe
Q 003313 538 ADGFTDVFAEH--KYEIVKILQEK-------KHVVGMTGDGVNDA-PALKKADIGIAV 585 (831)
Q Consensus 538 ~~v~~~~~P~~--K~~iv~~l~~~-------g~~v~~iGDG~ND~-~al~~AdvgIa~ 585 (831)
.+ -|...|.. |..++..++.. -+.+..+|||.||. |+++...--+||
T Consensus 152 ~h-sC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~am 208 (256)
T KOG3120|consen 152 QH-SCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAM 208 (256)
T ss_pred CC-ccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceec
Confidence 01 12233433 66666666543 23789999999995 777776666777
No 155
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=91.17 E-value=0.19 Score=51.27 Aligned_cols=98 Identities=12% Similarity=-0.027 Sum_probs=56.7
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHH--HHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeC
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAI--AKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVF 545 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~--a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 545 (831)
-++.|++.+.+++|+++|+++.++|+..... ........++... . ..++...+. ....-.
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~-f-d~v~~s~~~----------------~~~KP~ 154 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMAL-F-DAVVESCLE----------------GLRKPD 154 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhh-C-CEEEEeeec----------------CCCCCC
Confidence 3578999999999999999999999875432 2222222333210 0 001100000 001111
Q ss_pred hHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeE
Q 003313 546 AEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI 583 (831)
Q Consensus 546 P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgI 583 (831)
|+-=...++.+.-....++||||...|+.+-++|++-.
T Consensus 155 p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 155 PRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred HHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEE
Confidence 22223334444444567899999999999999998853
No 156
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=90.61 E-value=52 Score=41.68 Aligned_cols=64 Identities=13% Similarity=0.146 Sum_probs=40.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-----CCe-EEE----EECCEEEEEeCCCcCCCcEEEEcC
Q 003313 103 DSVGIVCLLIINSSISFIEESNAENATAALMAHL-----TPK-TKV----LRDGQWKEQDAAVLVPGDIISIKF 166 (831)
Q Consensus 103 ~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~-----~~~-~~V----~rdg~~~~i~~~~lv~GDiI~l~~ 166 (831)
..+++++.++++.+-++.++++.++..+...+.. ..+ ..+ +.-|....+...|.+|.|.+.++.
T Consensus 134 il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g 207 (941)
T TIGR01517 134 ILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISG 207 (941)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEc
Confidence 3444555566677777777776665444333211 222 222 234788899999999999999975
No 157
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=90.57 E-value=0.5 Score=51.63 Aligned_cols=91 Identities=15% Similarity=0.075 Sum_probs=66.0
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH----hCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEe
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRR----LGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDV 544 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~----~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 544 (831)
++.+++.+++++|++.|+.+.++|.-+...+..+-++ +|+.... .....
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f---------------------------~~~~~ 83 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF---------------------------DARSI 83 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe---------------------------eEEEE
Confidence 3578999999999999999999999999999998887 6664210 01112
Q ss_pred ChHHHHH----HHHHHhhcCCEEEEEcCCccChhhhccCCeeEEec
Q 003313 545 FAEHKYE----IVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVA 586 (831)
Q Consensus 545 ~P~~K~~----iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~ 586 (831)
.+..|.. +.+.+.-..+.++|+||...|+.+.+++...+.+-
T Consensus 84 ~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 84 NWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred ecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 2223433 33333334578999999999999999988876553
No 158
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=89.76 E-value=0.76 Score=44.82 Aligned_cols=107 Identities=17% Similarity=0.163 Sum_probs=76.1
Q ss_pred HHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCe--EEEEcCC-------CHHHHHH
Q 003313 431 LAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVC--VKMITGD-------HLAIAKE 501 (831)
Q Consensus 431 ~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~--v~m~TGD-------~~~~a~~ 501 (831)
+.+.|.|.+.+-.++ ++ ..-=++++-++..+.+++|++.+.. ++++|.- +...|..
T Consensus 36 Lk~~Gik~li~DkDN-------------TL--~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~ 100 (168)
T PF09419_consen 36 LKKKGIKALIFDKDN-------------TL--TPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA 100 (168)
T ss_pred hhhcCceEEEEcCCC-------------CC--CCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH
Confidence 667888888876554 11 1123567888999999999999774 9999986 4788999
Q ss_pred HHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhc-----CCEEEEEcCCc-cChhh
Q 003313 502 TGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEK-----KHVVGMTGDGV-NDAPA 575 (831)
Q Consensus 502 ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~-----g~~v~~iGDG~-ND~~a 575 (831)
+.+.+|+..- .+....|.-..++.+.++.+ .+.++||||-. .|+-+
T Consensus 101 ~~~~lgIpvl----------------------------~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~ 152 (168)
T PF09419_consen 101 LEKALGIPVL----------------------------RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLM 152 (168)
T ss_pred HHHhhCCcEE----------------------------EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHH
Confidence 9999998510 12234665566777877654 56799999964 57766
Q ss_pred hccCC
Q 003313 576 LKKAD 580 (831)
Q Consensus 576 l~~Ad 580 (831)
=+..+
T Consensus 153 gN~~G 157 (168)
T PF09419_consen 153 GNRMG 157 (168)
T ss_pred hhccC
Confidence 55444
No 159
>PLN02645 phosphoglycolate phosphatase
Probab=89.33 E-value=0.87 Score=49.54 Aligned_cols=48 Identities=17% Similarity=0.225 Sum_probs=38.9
Q ss_pred eeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHhCCC
Q 003313 462 GLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETG---RRLGIG 509 (831)
Q Consensus 462 G~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia---~~~gi~ 509 (831)
|.+.-.+.+=+++.++|++|++.|++++++|+....+...++ +++|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 555555677799999999999999999999999977766666 456763
No 160
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=88.90 E-value=0.55 Score=47.38 Aligned_cols=98 Identities=10% Similarity=0.030 Sum_probs=57.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-hCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRR-LGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAE 547 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~ 547 (831)
++.|++.+++++|+++|+++.++|.-+.......-.. .++... . ..++...+.. ...-.|+
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~-f-d~v~~s~~~~----------------~~KP~p~ 145 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA-A-DHIYLSQDLG----------------MRKPEAR 145 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh-c-CEEEEecccC----------------CCCCCHH
Confidence 4689999999999999999999999776544332211 233110 0 0111100000 0011122
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEE
Q 003313 548 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA 584 (831)
Q Consensus 548 ~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa 584 (831)
-=...++.+.-..+.+.++||...|+.+-++|++-..
T Consensus 146 ~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i 182 (199)
T PRK09456 146 IYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSI 182 (199)
T ss_pred HHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEE
Confidence 1133444444455679999999999999999988543
No 161
>PLN02151 trehalose-phosphatase
Probab=88.41 E-value=4.6 Score=44.34 Aligned_cols=66 Identities=20% Similarity=0.190 Sum_probs=44.9
Q ss_pred EeChH---HHHHHHHHHhhc----C---CEEEEEcCCccChhhhccC-----CeeEEecCchHHHhhhcCEEEeCCChhH
Q 003313 543 DVFAE---HKYEIVKILQEK----K---HVVGMTGDGVNDAPALKKA-----DIGIAVAGATEAARGAADIVLTEPGLSV 607 (831)
Q Consensus 543 ~~~P~---~K~~iv~~l~~~----g---~~v~~iGDG~ND~~al~~A-----dvgIa~~~~~~~a~~aadivl~~~~~~~ 607 (831)
++.|. +|...++.+.+. + ..++++||...|-.|++.. ++||-+|.+.. ...|++.+. +...
T Consensus 261 EvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k--~T~A~y~L~--dp~e 336 (354)
T PLN02151 261 EIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAK--ETNASYSLQ--EPDE 336 (354)
T ss_pred EEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCC--CCcceEeCC--CHHH
Confidence 44553 788888877653 1 2489999999999999853 67787774332 236888884 4666
Q ss_pred HHHHH
Q 003313 608 ICSAV 612 (831)
Q Consensus 608 i~~~i 612 (831)
+...+
T Consensus 337 V~~~L 341 (354)
T PLN02151 337 VMEFL 341 (354)
T ss_pred HHHHH
Confidence 66555
No 162
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=86.33 E-value=0.83 Score=45.33 Aligned_cols=98 Identities=12% Similarity=0.067 Sum_probs=61.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.+++.+++++|+ .++.++|+-+...+....+.+|+... .+ .++...+.... ...+.-.|+-
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~-fd-~i~~~~~~~~~------------~~~~KP~p~~ 146 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDC-FD-GIFCFDTANPD------------YLLPKPSPQA 146 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhh-hC-eEEEeecccCc------------cCCCCCCHHH
Confidence 36689999999998 47899999988888899899998431 11 11111000000 0000112222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeE
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI 583 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgI 583 (831)
=...++.+......++|+||...|+.+-++|++..
T Consensus 147 ~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 147 YEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 23445555555677999999999999988888754
No 163
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=86.08 E-value=1.3 Score=44.05 Aligned_cols=91 Identities=12% Similarity=0.083 Sum_probs=58.8
Q ss_pred hHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHH
Q 003313 474 SSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIV 553 (831)
Q Consensus 474 ~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv 553 (831)
..+.++.|++. +++.++||.....+...-+..|+... . ..++...+.. ..+-.|+-=....
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~-f-d~i~~~~~~~----------------~~KP~p~~~~~~~ 152 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRY-F-DAVVAADDVQ----------------HHKPAPDTFLRCA 152 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhH-c-eEEEehhhcc----------------CCCCChHHHHHHH
Confidence 46899999875 89999999999999999999998531 1 1111111100 0111222223344
Q ss_pred HHHhhcCCEEEEEcCCccChhhhccCCeeE
Q 003313 554 KILQEKKHVVGMTGDGVNDAPALKKADIGI 583 (831)
Q Consensus 554 ~~l~~~g~~v~~iGDG~ND~~al~~AdvgI 583 (831)
+.++.....+.++||..+|+.+-++|++-.
T Consensus 153 ~~~~~~~~~~l~igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 153 QLMGVQPTQCVVFEDADFGIQAARAAGMDA 182 (188)
T ss_pred HHcCCCHHHeEEEeccHhhHHHHHHCCCEE
Confidence 444444456889999999999999988753
No 164
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=85.92 E-value=0.62 Score=41.47 Aligned_cols=48 Identities=21% Similarity=0.266 Sum_probs=36.7
Q ss_pred eeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHhCCC
Q 003313 462 GLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETG---RRLGIG 509 (831)
Q Consensus 462 G~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia---~~~gi~ 509 (831)
|++.-.+++=|++.++|+.|+++|++++++|.....+...++ +.+|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 666677888899999999999999999999998865544444 556774
No 165
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=84.13 E-value=3.7 Score=39.55 Aligned_cols=103 Identities=15% Similarity=0.114 Sum_probs=66.7
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHH---HHHh-----CCCCCCCCCccccCCcCCCCCcccHHHHHHhcC
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKET---GRRL-----GIGTNMYPSSLLLGRDKDENEALPVDELIEKAD 539 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~i---a~~~-----gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (831)
|..++++.+..+.+++.|++++-+|++...-+... -.+. +++.. -++. +...+...+. -+
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~G----pv~~-------sP~~l~~al~-rE 93 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDG----PVLL-------SPDSLFSALH-RE 93 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCC----CEEE-------CCcchhhhhh-cc
Confidence 68999999999999999999999999996544332 2232 33211 0110 0011111110 01
Q ss_pred cEEEeChHHHHHHHHHHhhc-----CCEEEEEcCCccChhhhccCCee
Q 003313 540 GFTDVFAEHKYEIVKILQEK-----KHVVGMTGDGVNDAPALKKADIG 582 (831)
Q Consensus 540 v~~~~~P~~K~~iv~~l~~~-----g~~v~~iGDG~ND~~al~~Advg 582 (831)
+..+-.-+.|...++.++.. ...++..|...+|+.+.++++|-
T Consensus 94 vi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 94 VISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred ccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 34444446788888888763 45688899999999999988764
No 166
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=83.61 E-value=2.2 Score=44.11 Aligned_cols=89 Identities=20% Similarity=0.200 Sum_probs=54.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHH---HHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeC
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLA---IAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVF 545 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~---~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 545 (831)
+.=|++.+.++.+++.|++|+.+||++.. .+..=-++.|.... +.-.+.+..... ....
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~--~~l~lr~~~~~~----------------~~~~ 176 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW--DHLILRPDKDPS----------------KKSA 176 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB--SCGEEEEESSTS----------------S---
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc--chhccccccccc----------------cccc
Confidence 34478999999999999999999999854 23333456675421 111111100000 0001
Q ss_pred hHHHHHHHHHHhhcC-CEEEEEcCCccChhh
Q 003313 546 AEHKYEIVKILQEKK-HVVGMTGDGVNDAPA 575 (831)
Q Consensus 546 P~~K~~iv~~l~~~g-~~v~~iGDG~ND~~a 575 (831)
.+-|...-+.++++| ++++.+||-.+|...
T Consensus 177 ~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 177 VEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp ---SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred cccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 234777777888774 578899999999875
No 167
>PHA02597 30.2 hypothetical protein; Provisional
Probab=82.89 E-value=2.3 Score=42.60 Aligned_cols=91 Identities=14% Similarity=0.066 Sum_probs=52.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCC--CCCccccCCcCCCCCcccHHHHHHhcCcEEEe-C
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNM--YPSSLLLGRDKDENEALPVDELIEKADGFTDV-F 545 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~ 545 (831)
++.|++.+++++|++.+ +.+++|.-+.......-+.+|+..-. .-..++ .++. .
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~----------------------~~~~~~ 130 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEVL----------------------MCGHDE 130 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEEE----------------------EeccCc
Confidence 36789999999999975 56666765444444344556653100 001111 1111 1
Q ss_pred --hHHHHHHHHHHhhcCCEEEEEcCCccChhhhccC--CeeEE
Q 003313 546 --AEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKA--DIGIA 584 (831)
Q Consensus 546 --P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~A--dvgIa 584 (831)
|+--...++.++ .+.++|+||..+|+.+-++| ++-..
T Consensus 131 ~kp~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi~~i 171 (197)
T PHA02597 131 SKEKLFIKAKEKYG--DRVVCFVDDLAHNLDAAHEALSQLPVI 171 (197)
T ss_pred ccHHHHHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCCcEE
Confidence 222222333333 34688999999999999999 88543
No 168
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=82.68 E-value=3.9 Score=47.28 Aligned_cols=102 Identities=15% Similarity=0.060 Sum_probs=62.6
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-hCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEE--EeCh
Q 003313 470 PRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRR-LGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFT--DVFA 546 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~P 546 (831)
+++++.+ .+++.|.+ +++|+-...-+..+|++ +|++.- .+.+++...+..+... +-. .+.-
T Consensus 111 l~~~a~~---~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~V-------IgTeLev~~~G~~TG~-----i~g~~~c~G 174 (497)
T PLN02177 111 VHPETWR---VFNSFGKR-YIITASPRIMVEPFVKTFLGADKV-------LGTELEVSKSGRATGF-----MKKPGVLVG 174 (497)
T ss_pred cCHHHHH---HHHhCCCE-EEEECCcHHHHHHHHHHcCCCCEE-------EecccEECcCCEEeee-----ecCCCCCcc
Confidence 5555444 45567754 99999999999999987 898631 1111110000000000 000 1345
Q ss_pred HHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecC
Q 003313 547 EHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAG 587 (831)
Q Consensus 547 ~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~ 587 (831)
++|.+-++..........+.||..||.|||+.||-+.+++.
T Consensus 175 e~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 175 DHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred HHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 67887776433212223688999999999999999999985
No 169
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=81.82 E-value=2.3 Score=39.46 Aligned_cols=32 Identities=9% Similarity=0.124 Sum_probs=28.2
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHH
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIA 499 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a 499 (831)
+++.+++.++++++++.|+.++++||++....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~ 54 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTY 54 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhh
Confidence 56888999999999999999999999987643
No 170
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=80.65 E-value=14 Score=39.45 Aligned_cols=48 Identities=21% Similarity=0.253 Sum_probs=35.8
Q ss_pred eeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHH---HHHHhCCC
Q 003313 462 GLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKE---TGRRLGIG 509 (831)
Q Consensus 462 G~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~---ia~~~gi~ 509 (831)
|.+.-.+.+=+++.++|++|++.|++++++|+....+... --+++|+.
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 4555567777899999999999999999999976443333 23556774
No 171
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=78.95 E-value=1.5 Score=42.79 Aligned_cols=92 Identities=15% Similarity=0.048 Sum_probs=60.0
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
..||++.+.+++|.+. +++++.|.-....|..+.+.++....... ..+.... +.. .
T Consensus 42 ~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~-~~l~r~~---------------------~~~-~ 97 (162)
T TIGR02251 42 FKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVIS-RRLYRES---------------------CVF-T 97 (162)
T ss_pred EECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEe-EEEEccc---------------------cEE-e
Confidence 5799999999999988 99999999999999999999886431111 1111000 000 0
Q ss_pred HHHHHHHHh---hcCCEEEEEcCCccChhhhccCCeeEE
Q 003313 549 KYEIVKILQ---EKKHVVGMTGDGVNDAPALKKADIGIA 584 (831)
Q Consensus 549 K~~iv~~l~---~~g~~v~~iGDG~ND~~al~~AdvgIa 584 (831)
|..+++.+. .....|.++||...|..+-+++.+-+.
T Consensus 98 ~~~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~ 136 (162)
T TIGR02251 98 NGKYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIK 136 (162)
T ss_pred CCCEEeEchhcCCChhhEEEEeCChhhhccCccCEeecC
Confidence 111233333 234579999999988876665544443
No 172
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=78.08 E-value=3.3 Score=43.95 Aligned_cols=41 Identities=15% Similarity=0.120 Sum_probs=38.0
Q ss_pred CC-CChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q 003313 470 PR-HDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGT 510 (831)
Q Consensus 470 lr-~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~ 510 (831)
+| |++.+++++|+++|+++.++|+-....+...-+++|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 67 999999999999999999999999888999999999974
No 173
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=78.05 E-value=6.1 Score=42.38 Aligned_cols=137 Identities=16% Similarity=0.133 Sum_probs=78.9
Q ss_pred ccCCCCCChHHHHHHHHhCCCe---EEEEcCCCHHHHH------HHHHHhCCCCCCCC----------------------
Q 003313 466 LFDPPRHDSSDTIHRALKLGVC---VKMITGDHLAIAK------ETGRRLGIGTNMYP---------------------- 514 (831)
Q Consensus 466 ~~D~lr~~~~~~I~~l~~~Gi~---v~m~TGD~~~~a~------~ia~~~gi~~~~~~---------------------- 514 (831)
+.++++++.++.++.+++.|++ .++.-||++.... ..|+++||......
T Consensus 12 iA~~i~~~lk~~i~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~ 91 (301)
T PRK14194 12 AAARVLAQVREDVRTLKAAGIEPALAVILVGNDPASQVYVRNKILRAEEAGIRSLEHRLPADTSQARLLALIAELNADPS 91 (301)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCC
Confidence 4566788889999999888876 4666788865443 35777888531100
Q ss_pred -Ccccc-------------------CCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhh--cCCEEEEEcCC-cc
Q 003313 515 -SSLLL-------------------GRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQE--KKHVVGMTGDG-VN 571 (831)
Q Consensus 515 -~~~~~-------------------~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~--~g~~v~~iGDG-~N 571 (831)
+.++. .++.|..+..++..+...-..|.-|||..=.++++.+.- .|+.|+++|-| .-
T Consensus 92 V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~iv 171 (301)
T PRK14194 92 VNGILLQLPLPAHIDEARVLQAINPLKDVDGFHSENVGGLSQGRDVLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIV 171 (301)
T ss_pred CCeEEEeCCCCCCCCHHHHHhccCchhccCccChhhhhHHhcCCCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCcc
Confidence 00110 111111122233333333334566777777777776643 59999999997 33
Q ss_pred Ch---hhhccCCeeEEec---Cc-hHHHhhhcCEEEeC
Q 003313 572 DA---PALKKADIGIAVA---GA-TEAARGAADIVLTE 602 (831)
Q Consensus 572 D~---~al~~AdvgIa~~---~~-~~~a~~aadivl~~ 602 (831)
=. .+|..++..+.+- .. ...+-..||+|+.-
T Consensus 172 G~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsa 209 (301)
T PRK14194 172 GKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAA 209 (301)
T ss_pred HHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEe
Confidence 33 3555666666653 11 22233568999864
No 174
>PLN02423 phosphomannomutase
Probab=76.86 E-value=3.3 Score=43.36 Aligned_cols=41 Identities=24% Similarity=0.344 Sum_probs=35.4
Q ss_pred HHHHHHHHHhhcCCEEEEEcC----CccChhhhcc-CCeeEEecCch
Q 003313 548 HKYEIVKILQEKKHVVGMTGD----GVNDAPALKK-ADIGIAVAGAT 589 (831)
Q Consensus 548 ~K~~iv~~l~~~g~~v~~iGD----G~ND~~al~~-AdvgIa~~~~~ 589 (831)
+|..-++.|+ ..+.|+++|| |.||.+||+. .-.|+++.+-.
T Consensus 189 nKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~ 234 (245)
T PLN02423 189 DKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPD 234 (245)
T ss_pred CHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHH
Confidence 6999999999 7788999999 8999999996 77788886433
No 175
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=76.73 E-value=5.2 Score=41.14 Aligned_cols=100 Identities=12% Similarity=0.056 Sum_probs=70.5
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChH
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAE 547 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~ 547 (831)
.++.|++.+.+++|++.|+.+.+.|+-....+..+.+..|+.... ...+.+.+.. -.+-.|+
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f--~~~v~~~dv~----------------~~KP~Pd 146 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYF--DVIVTADDVA----------------RGKPAPD 146 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhc--chhccHHHHh----------------cCCCCCH
Confidence 368899999999999999999999999999999999999985321 1111111100 1122333
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEe
Q 003313 548 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV 585 (831)
Q Consensus 548 ~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~ 585 (831)
-=..-.+.|.-....+..+.|..|.+.|-++|+.-+-.
T Consensus 147 ~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv~ 184 (221)
T COG0637 147 IYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVG 184 (221)
T ss_pred HHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEEE
Confidence 33444455544566799999999999999999876644
No 176
>PRK10444 UMP phosphatase; Provisional
Probab=76.62 E-value=2.6 Score=44.24 Aligned_cols=45 Identities=18% Similarity=0.276 Sum_probs=39.8
Q ss_pred eeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHh
Q 003313 462 GLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRL 506 (831)
Q Consensus 462 G~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~ 506 (831)
|.+.-.+.+-|++.++++.|+++|++++++|+....+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 666667788899999999999999999999999998888887775
No 177
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=76.23 E-value=6.2 Score=40.34 Aligned_cols=120 Identities=13% Similarity=0.137 Sum_probs=69.1
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++-+++.++++++++. +++.++|--....+....+++|+... .+.-...+ -+....|+.
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~-Fd~v~~s~-------------------~~g~~KP~~ 157 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDY-FDAVFISE-------------------DVGVAKPDP 157 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhh-hheEEEec-------------------ccccCCCCc
Confidence 4567899999999988 99999999777788888899996431 11111110 012223322
Q ss_pred H--HHHHHHHhhcCCEEEEEcCC-ccChhhhccCCe-eEEecC-ch---HHHhhhcCEEEeCCChhHHHHHH
Q 003313 549 K--YEIVKILQEKKHVVGMTGDG-VNDAPALKKADI-GIAVAG-AT---EAARGAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 549 K--~~iv~~l~~~g~~v~~iGDG-~ND~~al~~Adv-gIa~~~-~~---~~a~~aadivl~~~~~~~i~~~i 612 (831)
+ ....+.+.-..+.++||||. .||+..-++++. +|-+.. +. +.. ...|..+ .++..+...+
T Consensus 158 ~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~-~~~~~~i--~~l~~l~~~~ 226 (229)
T COG1011 158 EIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDAL-EAPDYEI--SSLAELLDLL 226 (229)
T ss_pred HHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCc-cCCceEE--cCHHHHHHHH
Confidence 2 23334444345679999996 478444455555 344432 21 112 4455555 3355555444
No 178
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=75.54 E-value=4.8 Score=42.23 Aligned_cols=48 Identities=13% Similarity=0.034 Sum_probs=39.0
Q ss_pred eeccccCCCCCChHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHhCCC
Q 003313 462 GLLPLFDPPRHDSSDTIHRALKLGVCVKMITG---DHLAIAKETGRRLGIG 509 (831)
Q Consensus 462 G~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TG---D~~~~a~~ia~~~gi~ 509 (831)
|.+.-.+.+-+++.++|++|++.|++++++|| +.........+++|+.
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~ 60 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIP 60 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 44555566678999999999999999999996 6677777777788874
No 179
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=75.44 E-value=3.2 Score=43.74 Aligned_cols=48 Identities=25% Similarity=0.313 Sum_probs=36.7
Q ss_pred eeccccCC----CCCChHHHHHHHHhCCCeEEEEcCCCHHHH---HHHHHHhCCC
Q 003313 462 GLLPLFDP----PRHDSSDTIHRALKLGVCVKMITGDHLAIA---KETGRRLGIG 509 (831)
Q Consensus 462 G~i~~~D~----lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a---~~ia~~~gi~ 509 (831)
|.+.-.+. +=|++.++|++|+++|++++++||.+..+. ....+++|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 55555555 788999999999999999999999886653 3344556764
No 180
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=74.95 E-value=4.7 Score=39.80 Aligned_cols=98 Identities=15% Similarity=0.161 Sum_probs=56.5
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcC------cEEE
Q 003313 470 PRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKAD------GFTD 543 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------v~~~ 543 (831)
+.+++.+++..|+++|++++|+|--+ ||.....+...+.. ..+.+...+.... .+|-
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQs-----------Gi~rgyf~~~~f~~------~~~~m~~~l~~~gv~id~i~~Cp 94 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQS-----------GIGRGYFTEADFDK------LHNKMLKILASQGVKIDGILYCP 94 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECCC-----------CccccCccHHHHHH------HHHHHHHHHHHcCCccceEEECC
Confidence 46899999999999999999999733 33322111110000 0000111111111 1333
Q ss_pred eChHH--------HHHHHHHHhhcC---CEEEEEcCCccChhhhccCCeeEEe
Q 003313 544 VFAEH--------KYEIVKILQEKK---HVVGMTGDGVNDAPALKKADIGIAV 585 (831)
Q Consensus 544 ~~P~~--------K~~iv~~l~~~g---~~v~~iGDG~ND~~al~~AdvgIa~ 585 (831)
-.|++ ...+.+.+++.+ ....+|||-..|..+-..|+++ .+
T Consensus 95 h~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~-~~ 146 (181)
T COG0241 95 HHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK-GV 146 (181)
T ss_pred CCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC-ce
Confidence 33332 344555555544 6788999999999998888887 54
No 181
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=74.59 E-value=4.9 Score=42.79 Aligned_cols=41 Identities=7% Similarity=-0.008 Sum_probs=36.9
Q ss_pred CC-CChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q 003313 470 PR-HDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGT 510 (831)
Q Consensus 470 lr-~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~ 510 (831)
+| |++.+++++|+++|+++.++|+.+...+....+.+|+..
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~ 189 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEG 189 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCc
Confidence 46 899999999999999999999888888889999999963
No 182
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=71.54 E-value=22 Score=37.56 Aligned_cols=30 Identities=13% Similarity=0.314 Sum_probs=26.5
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHH
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLA 497 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~ 497 (831)
.|.=|++.+..+.+++.|++|+.+||+...
T Consensus 144 ApAlp~al~ly~~l~~~G~kIf~VSgR~e~ 173 (275)
T TIGR01680 144 APALPETLKNYNKLVSLGFKIIFLSGRLKD 173 (275)
T ss_pred CCCChHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 455679999999999999999999999854
No 183
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=71.08 E-value=6.2 Score=41.02 Aligned_cols=91 Identities=13% Similarity=0.069 Sum_probs=54.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChH-
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAE- 547 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~- 547 (831)
++-|++.+++++|++. +++.++|.-+... +..|+... . ..++...+ ..+..|.
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~~-----~~~gl~~~-f-d~i~~~~~------------------~~~~KP~p 166 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQP-----ELFGLGDY-F-EFVLRAGP------------------HGRSKPFS 166 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCchH-----HHCCcHHh-h-ceeEeccc------------------CCcCCCcH
Confidence 4668999999999975 8999998866441 45565321 0 01111100 0111221
Q ss_pred -HHHHHHHHHhhcCCEEEEEcCC-ccChhhhccCCeeEEe
Q 003313 548 -HKYEIVKILQEKKHVVGMTGDG-VNDAPALKKADIGIAV 585 (831)
Q Consensus 548 -~K~~iv~~l~~~g~~v~~iGDG-~ND~~al~~AdvgIa~ 585 (831)
-=....+.+.-..+.++||||. ..|+.+-++|++-...
T Consensus 167 ~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~ 206 (238)
T PRK10748 167 DMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACW 206 (238)
T ss_pred HHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEE
Confidence 1122233333345679999999 5999999999886654
No 184
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=68.78 E-value=15 Score=39.38 Aligned_cols=137 Identities=15% Similarity=0.167 Sum_probs=75.4
Q ss_pred ccCCCCCChHHHHHHHHhC-CCe---EEEEcCCCHHH------HHHHHHHhCCCCCCC------C---------------
Q 003313 466 LFDPPRHDSSDTIHRALKL-GVC---VKMITGDHLAI------AKETGRRLGIGTNMY------P--------------- 514 (831)
Q Consensus 466 ~~D~lr~~~~~~I~~l~~~-Gi~---v~m~TGD~~~~------a~~ia~~~gi~~~~~------~--------------- 514 (831)
+.++++++.++.++.+++. |++ .++.-||++.. ....|+++||..... +
T Consensus 10 ~a~~i~~~i~~~v~~l~~~~g~~p~La~i~vg~~~~s~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~i~~lN~d~ 89 (296)
T PRK14188 10 FAADVRATVAAEVARLKAAHGVTPGLAVVLVGEDPASQVYVRSKGKQTKEAGMASFEHKLPADTSQAELLALIARLNADP 89 (296)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 3456677888888888876 665 45666777643 344577888853111 0
Q ss_pred --Ccccc-------------------CCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhh--cCCEEEEEcC-Cc
Q 003313 515 --SSLLL-------------------GRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQE--KKHVVGMTGD-GV 570 (831)
Q Consensus 515 --~~~~~-------------------~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~--~g~~v~~iGD-G~ 570 (831)
+.++. .++.|..+..++-.+...-..|.-|||..=.++++.+.- .|+.|+++|- +.
T Consensus 90 ~V~GIlvq~Plp~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~ 169 (296)
T PRK14188 90 AIHGILVQLPLPKHLDSEAVIQAIDPEKDVDGLHVVNAGRLATGETALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNL 169 (296)
T ss_pred CCcEEEEeCCCCCCCCHHHHHhccCcccccccCChhhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcc
Confidence 00010 111111122222223222234566777776677766643 5999999994 33
Q ss_pred cC---hhhhccCCeeEEecC----chHHHhhhcCEEEeC
Q 003313 571 ND---APALKKADIGIAVAG----ATEAARGAADIVLTE 602 (831)
Q Consensus 571 ND---~~al~~AdvgIa~~~----~~~~a~~aadivl~~ 602 (831)
-= +..|..++..+.+-+ ..+.+-..||+++.-
T Consensus 170 mG~PmA~~L~~~g~tVtv~~~rT~~l~e~~~~ADIVIsa 208 (296)
T PRK14188 170 VGKPMAQLLLAANATVTIAHSRTRDLPAVCRRADILVAA 208 (296)
T ss_pred hHHHHHHHHHhCCCEEEEECCCCCCHHHHHhcCCEEEEe
Confidence 33 335556666666532 223334578998764
No 185
>PTZ00174 phosphomannomutase; Provisional
Probab=67.25 E-value=7.4 Score=40.69 Aligned_cols=36 Identities=19% Similarity=0.278 Sum_probs=30.8
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGR 504 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~ 504 (831)
++.+.+.++|+++++.|++++++||++........+
T Consensus 22 ~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~ 57 (247)
T PTZ00174 22 PITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLG 57 (247)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHh
Confidence 477889999999999999999999999886655443
No 186
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=67.16 E-value=47 Score=34.57 Aligned_cols=134 Identities=16% Similarity=0.125 Sum_probs=68.5
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCC-cCCCC-CcccHHHHHHhcCcEEEeC
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGR-DKDEN-EALPVDELIEKADGFTDVF 545 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~v~~~~~ 545 (831)
-.+|+++.+.++.|++.+|.+.++|+--.....++-++-|...+. .+++... .+++. ....+..- + .-
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~N--v~VvSN~M~Fd~~g~l~gF~~~-----l---IH 158 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPN--VKVVSNFMDFDEDGVLVGFKGP-----L---IH 158 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTT--EEEEEE-EEE-TTSBEEEE-SS-----------
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCC--eEEEeeeEEECCcceEeecCCC-----c---eE
Confidence 358999999999999999999999988877777777777754321 1111100 00000 00000000 0 00
Q ss_pred hHHHHH-------HHHHHhhcCCEEEEEcCCccChhhhccC---CeeEEec--Cc-----hHHHhhhcCEEEeCCChhHH
Q 003313 546 AEHKYE-------IVKILQEKKHVVGMTGDGVNDAPALKKA---DIGIAVA--GA-----TEAARGAADIVLTEPGLSVI 608 (831)
Q Consensus 546 P~~K~~-------iv~~l~~~g~~v~~iGDG~ND~~al~~A---dvgIa~~--~~-----~~~a~~aadivl~~~~~~~i 608 (831)
+-.|-. .-+.++. ...|...||..-|+.|-.-. +.-+.+| +. -+.=+++=|||+.+|.--.+
T Consensus 159 ~~NKn~~~l~~~~~~~~~~~-R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~tm~v 237 (246)
T PF05822_consen 159 TFNKNESALEDSPYFKQLKK-RTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQTMDV 237 (246)
T ss_dssp TT-HHHHHHTTHHHHHCTTT---EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B-HH
T ss_pred EeeCCcccccCchHHHHhcc-CCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCCCchH
Confidence 011211 1122332 34688889999999997655 4445555 32 22345678999999875555
Q ss_pred HHHH
Q 003313 609 CSAV 612 (831)
Q Consensus 609 ~~~i 612 (831)
+..|
T Consensus 238 ~~~i 241 (246)
T PF05822_consen 238 PNAI 241 (246)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 187
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=66.43 E-value=8.2 Score=37.66 Aligned_cols=85 Identities=12% Similarity=0.011 Sum_probs=51.8
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.++++ ++.++|.-+........+..|+.... ..++..++.. ...-.|+-
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~~~----------------~~KP~p~~ 144 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYF--DRAFSVDTVR----------------AYKPDPVV 144 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHH--hhhccHhhcC----------------CCCCCHHH
Confidence 47889999998 36789998888888888888874210 0111111000 11112221
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhcc
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKK 578 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~ 578 (831)
=....+.+.-..+.++||||...|+.+-++
T Consensus 145 f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~ 174 (175)
T TIGR01493 145 YELVFDTVGLPPDRVLMVAAHQWDLIGARK 174 (175)
T ss_pred HHHHHHHHCCCHHHeEeEecChhhHHHHhc
Confidence 134445554455679999999999887654
No 188
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=66.27 E-value=19 Score=38.56 Aligned_cols=137 Identities=13% Similarity=0.170 Sum_probs=77.8
Q ss_pred ccCCCCCChHHHHHHHHhC-CCe---EEEEcCCCHHH------HHHHHHHhCCCCCCCC---------------------
Q 003313 466 LFDPPRHDSSDTIHRALKL-GVC---VKMITGDHLAI------AKETGRRLGIGTNMYP--------------------- 514 (831)
Q Consensus 466 ~~D~lr~~~~~~I~~l~~~-Gi~---v~m~TGD~~~~------a~~ia~~~gi~~~~~~--------------------- 514 (831)
+.+++|++.++-++.+++. |++ .++..||++.. ....|+++||......
T Consensus 9 iA~~i~~~i~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~ 88 (295)
T PRK14174 9 VSLDLKNELKTRVEAYRAKTGKVPGLTVIIVGEDPASQVYVRNKAKSCKEIGMNSTVIELPADTTEEHLLKKIEDLNNDP 88 (295)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 3456778888888988877 665 46778888654 3445778888531110
Q ss_pred --Ccccc-------------------CCcCCCCCcccHHHHHHhc--CcEEEeChHHHHHHHHHHhh--cCCEEEEEcCC
Q 003313 515 --SSLLL-------------------GRDKDENEALPVDELIEKA--DGFTDVFAEHKYEIVKILQE--KKHVVGMTGDG 569 (831)
Q Consensus 515 --~~~~~-------------------~~~~~~~~~~~~~~~~~~~--~v~~~~~P~~K~~iv~~l~~--~g~~v~~iGDG 569 (831)
+.++. .++.|..+..++..+.... ..|.-|||..=.++++.++. .|+.|+++|.+
T Consensus 89 ~V~GIlvq~Plp~~id~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~ail~ll~~y~i~l~Gk~vvViGrS 168 (295)
T PRK14174 89 DVHGILVQQPLPKQIDEFAVTLAIDPAKDVDGFHPENLGRLVMGHLDKCFVSCTPYGILELLGRYNIETKGKHCVVVGRS 168 (295)
T ss_pred CCCEEEEeCCCCCCCCHHHHHhcCCccccccccChhhHHHHhcCCCCCCcCCCCHHHHHHHHHHhCCCCCCCEEEEECCC
Confidence 00111 1111112222333333221 23556788777777776653 58999999997
Q ss_pred cc----Chhhh------ccCCeeEEecCch--HHHhhhcCEEEeC
Q 003313 570 VN----DAPAL------KKADIGIAVAGAT--EAARGAADIVLTE 602 (831)
Q Consensus 570 ~N----D~~al------~~AdvgIa~~~~~--~~a~~aadivl~~ 602 (831)
.. =+.+| +.|.|-++-.... ...-..||+++..
T Consensus 169 ~iVG~Pla~lL~~~~~~~~atVt~~hs~t~~l~~~~~~ADIvI~A 213 (295)
T PRK14174 169 NIVGKPMANLMLQKLKESNCTVTICHSATKDIPSYTRQADILIAA 213 (295)
T ss_pred CcchHHHHHHHHhccccCCCEEEEEeCCchhHHHHHHhCCEEEEe
Confidence 54 22233 2466666665332 2344679999864
No 189
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=65.95 E-value=17 Score=38.64 Aligned_cols=136 Identities=13% Similarity=0.201 Sum_probs=75.6
Q ss_pred cCCCCCChHHHHHHHHhC-CCe---EEEEcCCCHHHH------HHHHHHhCCCCCCCC----------------------
Q 003313 467 FDPPRHDSSDTIHRALKL-GVC---VKMITGDHLAIA------KETGRRLGIGTNMYP---------------------- 514 (831)
Q Consensus 467 ~D~lr~~~~~~I~~l~~~-Gi~---v~m~TGD~~~~a------~~ia~~~gi~~~~~~---------------------- 514 (831)
.+.+|++.++.++.+++. |++ .++..||++... ...|+++||......
T Consensus 11 a~~i~~~lk~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~ 90 (284)
T PRK14179 11 AQKMQAELAEKVAKLKEEKGIVPGLVVILVGDNPASQVYVRNKERSALAAGFKSEVVRLPETISQEELLDLIERYNQDPT 90 (284)
T ss_pred HHHHHHHHHHHHHHHHhccCCCceEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 445677888888888776 665 356778876533 445778888531100
Q ss_pred -Ccccc-------------------CCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhh--cCCEEEEEcC-Ccc
Q 003313 515 -SSLLL-------------------GRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQE--KKHVVGMTGD-GVN 571 (831)
Q Consensus 515 -~~~~~-------------------~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~--~g~~v~~iGD-G~N 571 (831)
+.++. .++.|..+..++..+...-..|.-|||..=.++++.+.- .|+.++++|- |.-
T Consensus 91 V~GIivqlPlp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~iv 170 (284)
T PRK14179 91 WHGILVQLPLPKHINEEKILLAIDPKKDVDGFHPMNTGHLWSGRPVMIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIV 170 (284)
T ss_pred CCEEEEcCCCCCCCCHHHHHhccCccccccccCHhhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcC
Confidence 00111 111111122223333322234667788776777776653 5899999999 444
Q ss_pred Chh---hhccCCeeEEe--cCch--HHHhhhcCEEEeC
Q 003313 572 DAP---ALKKADIGIAV--AGAT--EAARGAADIVLTE 602 (831)
Q Consensus 572 D~~---al~~AdvgIa~--~~~~--~~a~~aadivl~~ 602 (831)
=.| +|.+++.-+.+ .... ...-..||+++.-
T Consensus 171 G~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~a 208 (284)
T PRK14179 171 GKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVVA 208 (284)
T ss_pred cHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEe
Confidence 443 45556655555 2222 2234578999764
No 190
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=65.21 E-value=12 Score=37.32 Aligned_cols=51 Identities=22% Similarity=0.299 Sum_probs=43.1
Q ss_pred eeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH---hCCC
Q 003313 459 SFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRR---LGIG 509 (831)
Q Consensus 459 ~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~---~gi~ 509 (831)
.+-|.+.++|..-|++.|+++.|++++.+|..+|.-..+.-+.+.++ ||+.
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 46799999999999999999999999999999998887766666554 5653
No 191
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=64.91 E-value=14 Score=42.99 Aligned_cols=40 Identities=13% Similarity=0.080 Sum_probs=32.6
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCH------------HHHHHHHHHhCCC
Q 003313 470 PRHDSSDTIHRALKLGVCVKMITGDHL------------AIAKETGRRLGIG 509 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~v~m~TGD~~------------~~a~~ia~~~gi~ 509 (831)
+-|++.+++++|+++|++++++|.-.. ..+..+.+++|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 469999999999999999999998554 3466777777774
No 192
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=64.56 E-value=4.4 Score=39.20 Aligned_cols=90 Identities=22% Similarity=0.305 Sum_probs=59.3
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHH----HHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeC
Q 003313 470 PRHDSSDTIHRALKLGVCVKMITGDHLA----IAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVF 545 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~v~m~TGD~~~----~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 545 (831)
+++=+++.|..=++.|=.++.+||+.+. +++.+|+...|... ... .|+.-.
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m--~pv-----------------------~f~Gdk 169 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNM--NPV-----------------------IFAGDK 169 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCC--cce-----------------------eeccCC
Confidence 5666788899889999999999999864 55666777777421 111 233322
Q ss_pred hH-HHHHHHHHHhhcCCEEEEEcCCccChhhhccCCe-eEEe
Q 003313 546 AE-HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADI-GIAV 585 (831)
Q Consensus 546 P~-~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Adv-gIa~ 585 (831)
|. .+..-...+|+++ +-..-||+.||+.|-|+|++ ||-+
T Consensus 170 ~k~~qy~Kt~~i~~~~-~~IhYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 170 PKPGQYTKTQWIQDKN-IRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred CCcccccccHHHHhcC-ceEEecCCchhhhHHHhcCccceeE
Confidence 20 1222244566665 44577999999999999876 4544
No 193
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=64.48 E-value=20 Score=38.25 Aligned_cols=137 Identities=19% Similarity=0.206 Sum_probs=76.1
Q ss_pred ccCCCCCChHHHHHHHHhC-CCe---EEEEcCCCHHHH------HHHHHHhCCCCCCCC---------------------
Q 003313 466 LFDPPRHDSSDTIHRALKL-GVC---VKMITGDHLAIA------KETGRRLGIGTNMYP--------------------- 514 (831)
Q Consensus 466 ~~D~lr~~~~~~I~~l~~~-Gi~---v~m~TGD~~~~a------~~ia~~~gi~~~~~~--------------------- 514 (831)
+.++++++.++-++.+++. |++ .++.-||++... ...|+++||......
T Consensus 9 ~A~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~ 88 (285)
T PRK14191 9 LSYKIEKDLKNKIQILTAQTGKRPKLAVILVGKDPASQTYVNMKIKACERVGMDSDLHTLQENTTEAELLSLIKDLNTDQ 88 (285)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 3456677888888888755 665 456678886543 445778888531100
Q ss_pred --Ccccc-------------------CCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhh--cCCEEEEEcCCcc
Q 003313 515 --SSLLL-------------------GRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQE--KKHVVGMTGDGVN 571 (831)
Q Consensus 515 --~~~~~-------------------~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~--~g~~v~~iGDG~N 571 (831)
+.++. .++.|..+..++..+...-..|.-|||..=.++++.++- .|+.|+.+|.|..
T Consensus 89 ~V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~ 168 (285)
T PRK14191 89 NIDGILVQLPLPRHIDTKMVLEAIDPNKDVDGFHPLNIGKLCSQLDGFVPATPMGVMRLLKHYHIEIKGKDVVIIGASNI 168 (285)
T ss_pred CCCEEEEeCCCCCCCCHHHHHhcCCccccccccChhhHHHHhcCCCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCch
Confidence 00111 111111222233333333334566788777777777654 5999999999832
Q ss_pred ----Chhhhc--cCCeeEEecCchHH--HhhhcCEEEeC
Q 003313 572 ----DAPALK--KADIGIAVAGATEA--ARGAADIVLTE 602 (831)
Q Consensus 572 ----D~~al~--~AdvgIa~~~~~~~--a~~aadivl~~ 602 (831)
=+.+|. .|.|-++-....+. ....||+++..
T Consensus 169 VG~Pla~lL~~~gAtVtv~hs~t~~l~~~~~~ADIvV~A 207 (285)
T PRK14191 169 VGKPLAMLMLNAGASVSVCHILTKDLSFYTQNADIVCVG 207 (285)
T ss_pred hHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCEEEEe
Confidence 233443 34555544433332 34578888764
No 194
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=62.76 E-value=22 Score=37.91 Aligned_cols=137 Identities=18% Similarity=0.225 Sum_probs=77.5
Q ss_pred ccCCCCCChHHHHHHHHhCCCe---EEEEcCCCHHHH------HHHHHHhCCCCCCCC-------------------C--
Q 003313 466 LFDPPRHDSSDTIHRALKLGVC---VKMITGDHLAIA------KETGRRLGIGTNMYP-------------------S-- 515 (831)
Q Consensus 466 ~~D~lr~~~~~~I~~l~~~Gi~---v~m~TGD~~~~a------~~ia~~~gi~~~~~~-------------------~-- 515 (831)
+.+++|++.++-++.+++.|++ .++..||++... ...|+++||...... +
T Consensus 10 iA~~i~~~ik~~i~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~ 89 (284)
T PRK14170 10 LAKEIQEKVTREVAELVKEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKT 89 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 3456778889999999988876 567789887544 445788898542110 0
Q ss_pred --cccc-------------------CCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhh--cCCEEEEEcCCcc-
Q 003313 516 --SLLL-------------------GRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQE--KKHVVGMTGDGVN- 571 (831)
Q Consensus 516 --~~~~-------------------~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~--~g~~v~~iGDG~N- 571 (831)
.++- .++.|..+..++..+.....-|.-|||..=.++++.+.- .|+.|+++|-+..
T Consensus 90 V~GIivqlPlP~~i~~~~i~~~I~p~KDVDGl~p~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~iV 169 (284)
T PRK14170 90 IHGILVQLPLPEHISEEKVIDTISYDKDVDGFHPVNVGNLFIGKDSFVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIV 169 (284)
T ss_pred CCeEEEecCCCCCCCHHHHHhccCcccCcccCChhhhhHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcc
Confidence 0010 111111122222233222233566777776667666543 5899999999743
Q ss_pred ---Chhhhcc--CCeeEEecCchH--HHhhhcCEEEeC
Q 003313 572 ---DAPALKK--ADIGIAVAGATE--AARGAADIVLTE 602 (831)
Q Consensus 572 ---D~~al~~--AdvgIa~~~~~~--~a~~aadivl~~ 602 (831)
=+.+|.. |.|-++-....+ .....||+++.-
T Consensus 170 GkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~A 207 (284)
T PRK14170 170 GKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVA 207 (284)
T ss_pred hHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEe
Confidence 3344544 444444443222 233578999864
No 195
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=61.94 E-value=21 Score=38.01 Aligned_cols=137 Identities=13% Similarity=0.134 Sum_probs=78.7
Q ss_pred ccCCCCCChHHHHHHHHhC-CCe---EEEEcCCCHHHH------HHHHHHhCCCCCCCC---------------------
Q 003313 466 LFDPPRHDSSDTIHRALKL-GVC---VKMITGDHLAIA------KETGRRLGIGTNMYP--------------------- 514 (831)
Q Consensus 466 ~~D~lr~~~~~~I~~l~~~-Gi~---v~m~TGD~~~~a------~~ia~~~gi~~~~~~--------------------- 514 (831)
+..++|++.++.++.+++. |++ .+++.||++... ...|+++||......
T Consensus 9 iA~~i~~~l~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~ 88 (286)
T PRK14184 9 TAATIREELKTEVAALTARHGRAPGLAVILVGEDPASQVYVRNKERACEDAGIVSEAFRLPADTTQEELEDLIAELNARP 88 (286)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 3445677888888888877 775 466688887643 445778888542110
Q ss_pred --Cccc-------------------cCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhh--cCCEEEEEcCCcc
Q 003313 515 --SSLL-------------------LGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQE--KKHVVGMTGDGVN 571 (831)
Q Consensus 515 --~~~~-------------------~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~--~g~~v~~iGDG~N 571 (831)
+.++ ..++.|..+..++..+.....-|.-|||..=.++++.++- .|+.|..+|.+..
T Consensus 89 ~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~i 168 (286)
T PRK14184 89 DIDGILLQLPLPKGLDSQRCLELIDPAKDVDGFHPENMGRLALGLPGFRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNI 168 (286)
T ss_pred cCceEEEecCCCCCCCHHHHHhccCcccCcccCCHhhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCcc
Confidence 0000 0111111122223333332334667788777777777653 5899999999743
Q ss_pred ----Chhhhcc------CCeeEEecCchH--HHhhhcCEEEeC
Q 003313 572 ----DAPALKK------ADIGIAVAGATE--AARGAADIVLTE 602 (831)
Q Consensus 572 ----D~~al~~------AdvgIa~~~~~~--~a~~aadivl~~ 602 (831)
=+-+|.. |.|-++-....+ ..-..||+++..
T Consensus 169 VG~Pla~lL~~~~~~~~AtVt~~hs~t~~l~~~~~~ADIVI~A 211 (286)
T PRK14184 169 VGKPLALMLGAPGKFANATVTVCHSRTPDLAEECREADFLFVA 211 (286)
T ss_pred chHHHHHHHhCCcccCCCEEEEEeCCchhHHHHHHhCCEEEEe
Confidence 2334543 666666654333 244678999764
No 196
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=61.45 E-value=23 Score=37.64 Aligned_cols=136 Identities=14% Similarity=0.176 Sum_probs=77.6
Q ss_pred cCCCCCChHHHHHHHHhCCCe---EEEEcCCCHHHH------HHHHHHhCCCCCCCC-----------------------
Q 003313 467 FDPPRHDSSDTIHRALKLGVC---VKMITGDHLAIA------KETGRRLGIGTNMYP----------------------- 514 (831)
Q Consensus 467 ~D~lr~~~~~~I~~l~~~Gi~---v~m~TGD~~~~a------~~ia~~~gi~~~~~~----------------------- 514 (831)
.++++++.++.++.+++.|++ .++.-||++... ...|+++||......
T Consensus 10 a~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V 89 (282)
T PRK14169 10 SKKILADLKQTVAKLAQQDVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVRSLMFRLPEATTQADLLAKVAELNHDPDV 89 (282)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCC
Confidence 456778888999999888876 466778886544 345778888532110
Q ss_pred Ccccc-------------------CCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhh--cCCEEEEEcCCcc--
Q 003313 515 SSLLL-------------------GRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQE--KKHVVGMTGDGVN-- 571 (831)
Q Consensus 515 ~~~~~-------------------~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~--~g~~v~~iGDG~N-- 571 (831)
+.++. .++.|..+..++..+......|.-|||..=.++++.++- .|+.|+++|.+..
T Consensus 90 ~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVG 169 (282)
T PRK14169 90 DAILVQLPLPAGLDEQAVIDAIDPDKDVDGFSPVSVGRLWANEPTVVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVG 169 (282)
T ss_pred CEEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhHHHhcCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccch
Confidence 00010 111111222233333333334566788777777777653 5899999999743
Q ss_pred --ChhhhccCCeeEEe--cCchH--HHhhhcCEEEeC
Q 003313 572 --DAPALKKADIGIAV--AGATE--AARGAADIVLTE 602 (831)
Q Consensus 572 --D~~al~~AdvgIa~--~~~~~--~a~~aadivl~~ 602 (831)
=+.+|...+.-+.+ ....+ .....||+++.-
T Consensus 170 kPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~A 206 (282)
T PRK14169 170 RPLAGLMVNHDATVTIAHSKTRNLKQLTKEADILVVA 206 (282)
T ss_pred HHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEc
Confidence 33455444444444 32222 233578999764
No 197
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=60.78 E-value=25 Score=37.44 Aligned_cols=137 Identities=15% Similarity=0.131 Sum_probs=74.7
Q ss_pred ccCCCCCChHHHHHHHHhCCCe---EEEEcCCCHHHH------HHHHHHhCCCCCCCC----------------------
Q 003313 466 LFDPPRHDSSDTIHRALKLGVC---VKMITGDHLAIA------KETGRRLGIGTNMYP---------------------- 514 (831)
Q Consensus 466 ~~D~lr~~~~~~I~~l~~~Gi~---v~m~TGD~~~~a------~~ia~~~gi~~~~~~---------------------- 514 (831)
+.+.+|++.++-++++++.|++ .++.-||++... ...|+++||......
T Consensus 11 va~~i~~~lk~~i~~l~~~g~~p~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~ 90 (285)
T PRK14189 11 LSKQLRAEAAQRAAALTARGHQPGLAVILVGDNPASQVYVRNKVKACEDNGFHSLKDRYPADLSEAELLARIDELNRDPK 90 (285)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCchHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCC
Confidence 3456777888888888877765 355668776433 445777787431100
Q ss_pred -Ccccc-------------------CCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhh--cCCEEEEEcCCcc-
Q 003313 515 -SSLLL-------------------GRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQE--KKHVVGMTGDGVN- 571 (831)
Q Consensus 515 -~~~~~-------------------~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~--~g~~v~~iGDG~N- 571 (831)
+.++- .++.|..+..++..+...-..|.-|||..=.++++.++- .|+.|+.+|-|..
T Consensus 91 V~GIlvq~Plp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iV 170 (285)
T PRK14189 91 IHGILVQLPLPKHIDSHKVIEAIAPEKDVDGFHVANAGALMTGQPLFRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIV 170 (285)
T ss_pred CCeEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhhHhhCCCCCCcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCcc
Confidence 00111 111111222223333332334566777766666666653 5899999999854
Q ss_pred ---ChhhhccCCeeEEe--cCchH--HHhhhcCEEEeC
Q 003313 572 ---DAPALKKADIGIAV--AGATE--AARGAADIVLTE 602 (831)
Q Consensus 572 ---D~~al~~AdvgIa~--~~~~~--~a~~aadivl~~ 602 (831)
=+.+|...+.-+.+ ....+ .....||+++.-
T Consensus 171 GkPla~lL~~~~atVt~~hs~t~~l~~~~~~ADIVV~a 208 (285)
T PRK14189 171 GKPMAMLLLQAGATVTICHSKTRDLAAHTRQADIVVAA 208 (285)
T ss_pred HHHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCEEEEc
Confidence 23455444444443 32222 234578999864
No 198
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=59.59 E-value=14 Score=38.96 Aligned_cols=118 Identities=13% Similarity=0.083 Sum_probs=65.4
Q ss_pred CChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHh-----cCcEEEeCh
Q 003313 472 HDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEK-----ADGFTDVFA 546 (831)
Q Consensus 472 ~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~P 546 (831)
++..++++.|++.|++..+.|+.............|+. .+-..+.. ...+..-.|
T Consensus 123 ~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g--------------------~~~~~i~~~~~~~~~~~gKP~p 182 (257)
T TIGR01458 123 QILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVG--------------------PFVTALEYATDTKATVVGKPSK 182 (257)
T ss_pred HHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCch--------------------HHHHHHHHHhCCCceeecCCCH
Confidence 57788999999999999999887644332222122211 01111110 001222233
Q ss_pred HHHHHHHHHHhhcCCEEEEEcCCc-cChhhhccCCeeEEe-cCch---H---HHhhhcCEEEeCCChhHHHHH
Q 003313 547 EHKYEIVKILQEKKHVVGMTGDGV-NDAPALKKADIGIAV-AGAT---E---AARGAADIVLTEPGLSVICSA 611 (831)
Q Consensus 547 ~~K~~iv~~l~~~g~~v~~iGDG~-ND~~al~~AdvgIa~-~~~~---~---~a~~aadivl~~~~~~~i~~~ 611 (831)
+-=....+.+....+.++||||.. +|+.+-+.+++--.. ..|. + .....+|+++ +++..+.+.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~--~sl~el~~~ 253 (257)
T TIGR01458 183 TFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTC--DSLPHAVDL 253 (257)
T ss_pred HHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEE--CCHHHHHHH
Confidence 322344444544557899999996 899988888875433 3331 1 1223467777 456666543
No 199
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=57.23 E-value=32 Score=36.57 Aligned_cols=137 Identities=18% Similarity=0.183 Sum_probs=76.1
Q ss_pred ccCCCCCChHHHHHHHHhCCCe---EEEEcCCCHHHH------HHHHHHhCCCCCCCC----------------------
Q 003313 466 LFDPPRHDSSDTIHRALKLGVC---VKMITGDHLAIA------KETGRRLGIGTNMYP---------------------- 514 (831)
Q Consensus 466 ~~D~lr~~~~~~I~~l~~~Gi~---v~m~TGD~~~~a------~~ia~~~gi~~~~~~---------------------- 514 (831)
+.++++++.++.++.+++.|++ .++.-||++... ...|+++||......
T Consensus 9 iA~~i~~~ik~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~d~~ 88 (282)
T PRK14182 9 IAAKVKGEVATEVRALAARGVQTGLTVVRVGDDPASAIYVRGKRKDCEEVGITSVEHHLPATTTQAELLALIARLNADPA 88 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 3456778888999999888876 566778887543 445788898542110
Q ss_pred -Ccccc-------------------CCcCCCCCcccHHHHHHhcCc-EEEeChHHHHHHHHHHhh--cCCEEEEEcCCcc
Q 003313 515 -SSLLL-------------------GRDKDENEALPVDELIEKADG-FTDVFAEHKYEIVKILQE--KKHVVGMTGDGVN 571 (831)
Q Consensus 515 -~~~~~-------------------~~~~~~~~~~~~~~~~~~~~v-~~~~~P~~K~~iv~~l~~--~g~~v~~iGDG~N 571 (831)
+.++. .++.|..+..++..+.....- |.-|||..=.++++.++- .|+.|+.+|.+..
T Consensus 89 V~GIivqlPLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~~PcTp~avi~ll~~~~i~l~Gk~vvViGrS~i 168 (282)
T PRK14182 89 VHGILVQLPLPKHVDERAVLDAISPAKDADGFHPFNVGALSIGIAGVPRPCTPAGVMRMLDEARVDPKGKRALVVGRSNI 168 (282)
T ss_pred CCEEEEeCCCCCCCCHHHHHhccCcccCcCCCCHhHHHHHhCCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCc
Confidence 00010 111111122222233222122 456777766666666652 5899999999743
Q ss_pred ----Chhhhcc--CCeeEEecCchH--HHhhhcCEEEeC
Q 003313 572 ----DAPALKK--ADIGIAVAGATE--AARGAADIVLTE 602 (831)
Q Consensus 572 ----D~~al~~--AdvgIa~~~~~~--~a~~aadivl~~ 602 (831)
=+.+|.. |-|-++-....+ ..-..||+++..
T Consensus 169 VGkPla~lL~~~~AtVtichs~T~nl~~~~~~ADIvI~A 207 (282)
T PRK14182 169 VGKPMAMMLLERHATVTIAHSRTADLAGEVGRADILVAA 207 (282)
T ss_pred chHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEe
Confidence 3345543 444544432222 223468998764
No 200
>PTZ00445 p36-lilke protein; Provisional
Probab=55.09 E-value=21 Score=36.08 Aligned_cols=63 Identities=13% Similarity=0.090 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHhccCeeeeeeeecCCCCCCCCCCCCceeeee--ccccC----------CCCCChHHHHHHHHhCCCeEE
Q 003313 422 GKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGL--LPLFD----------PPRHDSSDTIHRALKLGVCVK 489 (831)
Q Consensus 422 ~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~--i~~~D----------~lr~~~~~~I~~l~~~Gi~v~ 489 (831)
+......+.+.+.|.|++++-.+. ++++. =+.-+ .++|+.++-+++|+++||++.
T Consensus 29 ~~~~~~v~~L~~~GIk~Va~D~Dn-------------TlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v~ 95 (219)
T PTZ00445 29 ESADKFVDLLNECGIKVIASDFDL-------------TMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKIS 95 (219)
T ss_pred HHHHHHHHHHHHcCCeEEEecchh-------------hhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeEE
Confidence 344455667889999999876654 33330 01222 379999999999999999999
Q ss_pred EEcCCCHH
Q 003313 490 MITGDHLA 497 (831)
Q Consensus 490 m~TGD~~~ 497 (831)
++|=-...
T Consensus 96 VVTfSd~~ 103 (219)
T PTZ00445 96 VVTFSDKE 103 (219)
T ss_pred EEEccchh
Confidence 99965544
No 201
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=54.92 E-value=36 Score=36.16 Aligned_cols=137 Identities=14% Similarity=0.175 Sum_probs=77.3
Q ss_pred ccCCCCCChHHHHHHHHhCCCe----EEEEcCCCHHHH------HHHHHHhCCCCCCCC---------------------
Q 003313 466 LFDPPRHDSSDTIHRALKLGVC----VKMITGDHLAIA------KETGRRLGIGTNMYP--------------------- 514 (831)
Q Consensus 466 ~~D~lr~~~~~~I~~l~~~Gi~----v~m~TGD~~~~a------~~ia~~~gi~~~~~~--------------------- 514 (831)
+.+++|++.++-++++++.|.+ .++.-||++... ...|+++||......
T Consensus 10 iA~~i~~~lk~~i~~l~~~g~~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~ 89 (278)
T PRK14172 10 VALKIKEEIKNFVEERKENGLSIPKIASILVGNDGGSIYYMNNQEKVANSLGIDFKKIKLDESISEEDLINEIEELNKDN 89 (278)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 3456778888889998877742 466788887654 445778888531100
Q ss_pred --CccccCC-------------------cCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhh--cCCEEEEEcCCcc
Q 003313 515 --SSLLLGR-------------------DKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQE--KKHVVGMTGDGVN 571 (831)
Q Consensus 515 --~~~~~~~-------------------~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~--~g~~v~~iGDG~N 571 (831)
+.++... +.|..+..++..+......|.-|||..=.++++.++- .|+.|+++|.+..
T Consensus 90 ~V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~ 169 (278)
T PRK14172 90 NVHGIMLQLPLPKHLDEKKITNKIDANKDIDCLTFISVGKFYKGEKCFLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNI 169 (278)
T ss_pred CCCeEEEcCCCCCCCCHHHHHhccCcccccCccCHhhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCcc
Confidence 0011111 1111122222223222233567788877777777754 5999999999754
Q ss_pred ----ChhhhccCCeeEEe--cCchHH--HhhhcCEEEeC
Q 003313 572 ----DAPALKKADIGIAV--AGATEA--ARGAADIVLTE 602 (831)
Q Consensus 572 ----D~~al~~AdvgIa~--~~~~~~--a~~aadivl~~ 602 (831)
=+-+|.+.+.-+.+ ....+. .-..||+++..
T Consensus 170 VGkPla~lL~~~~AtVt~chs~T~~l~~~~~~ADIvIsA 208 (278)
T PRK14172 170 VGKPVAQLLLNENATVTICHSKTKNLKEVCKKADILVVA 208 (278)
T ss_pred chHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 34455555555544 322222 23568999764
No 202
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=54.42 E-value=45 Score=32.82 Aligned_cols=106 Identities=19% Similarity=0.151 Sum_probs=68.0
Q ss_pred ChHHHHHHHHhCCCeEEEEcCCCHHH-HHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHH
Q 003313 473 DSSDTIHRALKLGVCVKMITGDHLAI-AKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYE 551 (831)
Q Consensus 473 ~~~~~I~~l~~~Gi~v~m~TGD~~~~-a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~ 551 (831)
|..++++++++.|-++.+++=++... ...+.+.+|+. ...+.--++++=..
T Consensus 65 Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~----------------------------i~~~~~~~~~e~~~ 116 (176)
T PF06506_consen 65 DILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVD----------------------------IKIYPYDSEEEIEA 116 (176)
T ss_dssp HHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-E----------------------------EEEEEESSHHHHHH
T ss_pred HHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCc----------------------------eEEEEECCHHHHHH
Confidence 45566666666666777776666443 56666666653 12355567888888
Q ss_pred HHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHh-hhcCEEEeCCChhHHHHHHHHhHHHHHHHHH
Q 003313 552 IVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAAR-GAADIVLTEPGLSVICSAVLTSRTVFQIMKN 624 (831)
Q Consensus 552 iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~-~aadivl~~~~~~~i~~~i~~gR~~~~~i~~ 624 (831)
.++.++..| .-+.+|++.- .+.|+ .--..++...+..+|..++.+++++.+..++
T Consensus 117 ~i~~~~~~G-~~viVGg~~~-----------------~~~A~~~gl~~v~i~sg~esi~~Al~eA~~i~~~~~~ 172 (176)
T PF06506_consen 117 AIKQAKAEG-VDVIVGGGVV-----------------CRLARKLGLPGVLIESGEESIRRALEEALRIARARRR 172 (176)
T ss_dssp HHHHHHHTT---EEEESHHH-----------------HHHHHHTTSEEEESS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcC-CcEEECCHHH-----------------HHHHHHcCCcEEEEEecHHHHHHHHHHHHHHHHHHHH
Confidence 999999888 4556677631 22222 2345677788899999999999999887764
No 203
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=53.82 E-value=27 Score=37.22 Aligned_cols=137 Identities=18% Similarity=0.254 Sum_probs=77.9
Q ss_pred ccCCCCCChHHHHHHHHhCCCe---EEEEcCCCHHH------HHHHHHHhCCCCCCCC-------------------C--
Q 003313 466 LFDPPRHDSSDTIHRALKLGVC---VKMITGDHLAI------AKETGRRLGIGTNMYP-------------------S-- 515 (831)
Q Consensus 466 ~~D~lr~~~~~~I~~l~~~Gi~---v~m~TGD~~~~------a~~ia~~~gi~~~~~~-------------------~-- 515 (831)
+.+.+|++.++-++++++.|++ .++.-||++.. ....|+++||...... +
T Consensus 11 vA~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~ 90 (284)
T PRK14190 11 VAKEKREQLKEEVVKLKEQGIVPGLAVILVGDDPASHSYVRGKKKAAEKVGIYSELYEFPADITEEELLALIDRLNADPR 90 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 4456778888889999888875 35556888653 3455778888531110 0
Q ss_pred --ccc-------------------cCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhh--cCCEEEEEcCCcc-
Q 003313 516 --SLL-------------------LGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQE--KKHVVGMTGDGVN- 571 (831)
Q Consensus 516 --~~~-------------------~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~--~g~~v~~iGDG~N- 571 (831)
.++ ..++.|..+..++..+......|.-|||..=.++++.++- .|+.|+.+|-+.-
T Consensus 91 V~GIlvq~PLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iV 170 (284)
T PRK14190 91 INGILVQLPLPKHIDEKAVIERISPEKDVDGFHPINVGRMMLGQDTFLPCTPHGILELLKEYNIDISGKHVVVVGRSNIV 170 (284)
T ss_pred CCEEEEeCCCCCCCCHHHHHhcCCccccccccCHhhHHHHhcCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCcc
Confidence 011 0111122222233333333344667888777777777753 5899999999743
Q ss_pred ---Chhhhc--cCCeeEEecCchH--HHhhhcCEEEeC
Q 003313 572 ---DAPALK--KADIGIAVAGATE--AARGAADIVLTE 602 (831)
Q Consensus 572 ---D~~al~--~AdvgIa~~~~~~--~a~~aadivl~~ 602 (831)
=+.+|. .|.|-++-....+ .....||+++.-
T Consensus 171 G~Pla~lL~~~~atVt~chs~t~~l~~~~~~ADIvI~A 208 (284)
T PRK14190 171 GKPVGQLLLNENATVTYCHSKTKNLAELTKQADILIVA 208 (284)
T ss_pred HHHHHHHHHHCCCEEEEEeCCchhHHHHHHhCCEEEEe
Confidence 233443 3455554442222 234578888754
No 204
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=53.14 E-value=48 Score=36.43 Aligned_cols=37 Identities=11% Similarity=0.099 Sum_probs=34.3
Q ss_pred CCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHh-C
Q 003313 471 RHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRL-G 507 (831)
Q Consensus 471 r~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~-g 507 (831)
-|++.+.+++|+++|+++.++|+-....+..+.+.+ |
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 479999999999999999999999999999999886 6
No 205
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=52.60 E-value=15 Score=38.91 Aligned_cols=46 Identities=17% Similarity=0.161 Sum_probs=39.6
Q ss_pred eeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHh
Q 003313 461 CGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRL 506 (831)
Q Consensus 461 lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~ 506 (831)
=|.+.-.+.+=|++.++|+.|+++|++++.+|.-...+...+++++
T Consensus 16 DGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 16 DGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred cCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 4777888889999999999999999999999999877777565554
No 206
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=51.58 E-value=35 Score=36.65 Aligned_cols=137 Identities=20% Similarity=0.218 Sum_probs=76.1
Q ss_pred ccCCCCCChHHHHHHHHhC-CCe---EEEEcCCCHHHH------HHHHHHhCCCCCCCC---------------------
Q 003313 466 LFDPPRHDSSDTIHRALKL-GVC---VKMITGDHLAIA------KETGRRLGIGTNMYP--------------------- 514 (831)
Q Consensus 466 ~~D~lr~~~~~~I~~l~~~-Gi~---v~m~TGD~~~~a------~~ia~~~gi~~~~~~--------------------- 514 (831)
+.+++|++.++.++.+++. |++ .++.-||++... ...|+++||......
T Consensus 10 iA~~i~~~lk~~v~~l~~~~g~~p~LaiI~vgdd~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~ 89 (297)
T PRK14186 10 LAAEIEQRLQAQIESNLPKAGRPPGLAVLRVGDDPASAVYVRNKEKACARVGIASFGKHLPADTSQAEVEALIAQLNQDE 89 (297)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 4456778888888888776 775 366778886543 445778888541110
Q ss_pred --Ccccc-------------------CCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhh--cCCEEEEEcCCcc
Q 003313 515 --SSLLL-------------------GRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQE--KKHVVGMTGDGVN 571 (831)
Q Consensus 515 --~~~~~-------------------~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~--~g~~v~~iGDG~N 571 (831)
+.++- .++.|..+..++..+...-.-|.-|||..=.++++.++- .|+.|+++|-+..
T Consensus 90 ~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~i 169 (297)
T PRK14186 90 RVDGILLQLPLPKHLDEVPLLHAIDPDKDADGLHPLNLGRLVKGEPGLRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSIL 169 (297)
T ss_pred CCCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCcc
Confidence 00010 111111122223333222223556778777777777653 5899999999743
Q ss_pred ----Chhhhcc--CCeeEEecCch--HHHhhhcCEEEeC
Q 003313 572 ----DAPALKK--ADIGIAVAGAT--EAARGAADIVLTE 602 (831)
Q Consensus 572 ----D~~al~~--AdvgIa~~~~~--~~a~~aadivl~~ 602 (831)
=+-+|.. |.|-++-.... ......||+++..
T Consensus 170 VGkPla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvIsA 208 (297)
T PRK14186 170 VGKPLALMLLAANATVTIAHSRTQDLASITREADILVAA 208 (297)
T ss_pred chHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 2344543 44544544222 2233579999863
No 207
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=51.55 E-value=41 Score=36.74 Aligned_cols=138 Identities=17% Similarity=0.177 Sum_probs=77.8
Q ss_pred cccCCCCCChHHHHHHHHhC-CCe---EEEEcCCCHHHH------HHHHHHhCCCCCCCC-------------------C
Q 003313 465 PLFDPPRHDSSDTIHRALKL-GVC---VKMITGDHLAIA------KETGRRLGIGTNMYP-------------------S 515 (831)
Q Consensus 465 ~~~D~lr~~~~~~I~~l~~~-Gi~---v~m~TGD~~~~a------~~ia~~~gi~~~~~~-------------------~ 515 (831)
.+.+++|.+.++.++++++. |++ .+++-||++... ...|+++||...... +
T Consensus 63 ~vA~~i~~~lk~~v~~l~~~~g~~P~LaiIlvGddpaS~~Yv~~k~K~a~~~GI~~~~~~l~~~~te~ell~~I~~lN~D 142 (345)
T PLN02897 63 VIAEEIRTKIASEVRKMKKAVGKVPGLAVVLVGQQRDSQTYVRNKIKACEETGIKSLLAELPEDCTEGQILSALRKFNED 142 (345)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCChHHHHHHHHHHHHHHhcCCEEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 45567888888999999877 765 456778886544 345778888531100 0
Q ss_pred ----ccc-------------------cCCcCCCCCcccHHHHHHh--cCcEEEeChHHHHHHHHHHhh--cCCEEEEEcC
Q 003313 516 ----SLL-------------------LGRDKDENEALPVDELIEK--ADGFTDVFAEHKYEIVKILQE--KKHVVGMTGD 568 (831)
Q Consensus 516 ----~~~-------------------~~~~~~~~~~~~~~~~~~~--~~v~~~~~P~~K~~iv~~l~~--~g~~v~~iGD 568 (831)
.++ ..++.|..+..++..+... ...|.-|||..=.++++.++- .|+.|.++|-
T Consensus 143 ~~V~GIlVQlPLP~hid~~~i~~~I~p~KDVDGl~p~N~G~L~~~~~~~~~~PCTp~avi~LL~~~~i~l~GK~vvVIGR 222 (345)
T PLN02897 143 TSIHGILVQLPLPQHLDESKILNMVRLEKDVDGFHPLNVGNLAMRGREPLFVSCTPKGCVELLIRSGVEIAGKNAVVIGR 222 (345)
T ss_pred CCCCEEEEeCCCCCCCCHHHHHhccCcccCccCCCHHHHHHHhcCCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECC
Confidence 011 1111222222233333322 234666788777777766643 4999999999
Q ss_pred Ccc----ChhhhccCCeeEEe--cCc--hHHHhhhcCEEEeC
Q 003313 569 GVN----DAPALKKADIGIAV--AGA--TEAARGAADIVLTE 602 (831)
Q Consensus 569 G~N----D~~al~~AdvgIa~--~~~--~~~a~~aadivl~~ 602 (831)
+.. =+-+|...+.-|.+ ... -+..-..||+++.-
T Consensus 223 S~iVGkPla~LL~~~~ATVTicHs~T~nl~~~~~~ADIvIsA 264 (345)
T PLN02897 223 SNIVGLPMSLLLQRHDATVSTVHAFTKDPEQITRKADIVIAA 264 (345)
T ss_pred CccccHHHHHHHHHCCCEEEEEcCCCCCHHHHHhhCCEEEEc
Confidence 643 34455555444444 311 22233578998764
No 208
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=50.70 E-value=23 Score=37.87 Aligned_cols=137 Identities=15% Similarity=0.209 Sum_probs=74.8
Q ss_pred ccCCCCCChHHHHHHHHhCCCe---EEEEcCCCHHHH------HHHHHHhCCCCCCCC-------------------C--
Q 003313 466 LFDPPRHDSSDTIHRALKLGVC---VKMITGDHLAIA------KETGRRLGIGTNMYP-------------------S-- 515 (831)
Q Consensus 466 ~~D~lr~~~~~~I~~l~~~Gi~---v~m~TGD~~~~a------~~ia~~~gi~~~~~~-------------------~-- 515 (831)
+.+.++++.++.++.+++.|++ .+++-||++... ...|+++||...... +
T Consensus 11 ia~~i~~~~~~~v~~l~~~g~~p~Laii~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~ 90 (286)
T PRK14175 11 IAKDYRQGLQDQVEALKEKGFTPKLSVILVGNDGASQSYVRSKKKAAEKIGMISEIVHLEETATEEEVLNELNRLNNDDS 90 (286)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 4456788889999999888876 356688887544 345778888531110 0
Q ss_pred --cccc-------------------CCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHh--hcCCEEEEEcCCcc-
Q 003313 516 --SLLL-------------------GRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQ--EKKHVVGMTGDGVN- 571 (831)
Q Consensus 516 --~~~~-------------------~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~--~~g~~v~~iGDG~N- 571 (831)
.++. .++.|..+..++..+...-..|.-|||..=.++++.+. -+|+.|+.+|-|..
T Consensus 91 V~GIivq~Plp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~V 170 (286)
T PRK14175 91 VSGILVQVPLPKQVSEQKILEAINPEKDVDGFHPINIGKLYIDEQTFVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIV 170 (286)
T ss_pred CCEEEEeCCCCCCCCHHHHHhccCcccCcccCCccchHhHhcCCCCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchh
Confidence 0000 11111122222333332223456677777677777664 25899999999852
Q ss_pred ---Chhhhcc--CCeeEEecCchH--HHhhhcCEEEeC
Q 003313 572 ---DAPALKK--ADIGIAVAGATE--AARGAADIVLTE 602 (831)
Q Consensus 572 ---D~~al~~--AdvgIa~~~~~~--~a~~aadivl~~ 602 (831)
=+.+|.. |.|-++-....+ .....||+++..
T Consensus 171 G~pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVIsA 208 (286)
T PRK14175 171 GQPVSKLLLQKNASVTILHSRSKDMASYLKDADVIVSA 208 (286)
T ss_pred HHHHHHHHHHCCCeEEEEeCCchhHHHHHhhCCEEEEC
Confidence 2233433 444444432222 123457777653
No 209
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=50.30 E-value=24 Score=37.90 Aligned_cols=137 Identities=19% Similarity=0.198 Sum_probs=77.9
Q ss_pred ccCCCCCChHHHHHHHHhCCCe---EEEEcCCCHHH------HHHHHHHhCCCCCCCC----------------------
Q 003313 466 LFDPPRHDSSDTIHRALKLGVC---VKMITGDHLAI------AKETGRRLGIGTNMYP---------------------- 514 (831)
Q Consensus 466 ~~D~lr~~~~~~I~~l~~~Gi~---v~m~TGD~~~~------a~~ia~~~gi~~~~~~---------------------- 514 (831)
+.+.+|++.++-++.+++.|++ .++.-||++.. ....|+++||......
T Consensus 10 vA~~i~~~l~~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~ 89 (297)
T PRK14167 10 VAAQIRDDLTDAIETLEDAGVTPGLATVLMSDDPASETYVSMKQRDCEEVGIEAIDVEIDPDAPAEELYDTIDELNADED 89 (297)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 3456788888999999888885 46677888654 3445788898542110
Q ss_pred -Ccccc-------------------CCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhh--cCCEEEEEcCCcc-
Q 003313 515 -SSLLL-------------------GRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQE--KKHVVGMTGDGVN- 571 (831)
Q Consensus 515 -~~~~~-------------------~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~--~g~~v~~iGDG~N- 571 (831)
+.++. .++.|..+..++..+...-..|.-|||..=.++++.++- .|+.|+.+|-+..
T Consensus 90 V~GIlvq~PLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iV 169 (297)
T PRK14167 90 VHGILVQMPVPDHVDDREVLRRIDPAKDVDGFHPENVGRLVAGDARFKPCTPHGIQKLLAAAGVDTEGADVVVVGRSDIV 169 (297)
T ss_pred CCEEEEcCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccc
Confidence 00111 111111122223333222233556788777777777654 6999999999744
Q ss_pred ---Chhhhcc------CCeeEEecCchH--HHhhhcCEEEeC
Q 003313 572 ---DAPALKK------ADIGIAVAGATE--AARGAADIVLTE 602 (831)
Q Consensus 572 ---D~~al~~------AdvgIa~~~~~~--~a~~aadivl~~ 602 (831)
=+-+|.. |-|-++-....+ ..-..||+++.-
T Consensus 170 GkPla~lL~~~~~~~~aTVtvchs~T~~l~~~~~~ADIvIsA 211 (297)
T PRK14167 170 GKPMANLLIQKADGGNATVTVCHSRTDDLAAKTRRADIVVAA 211 (297)
T ss_pred HHHHHHHHhcCccCCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 2334443 445555442222 234578998863
No 210
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=50.03 E-value=1.3e+02 Score=31.79 Aligned_cols=69 Identities=16% Similarity=0.028 Sum_probs=47.0
Q ss_pred HHHHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccccCCCCCChHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHhC
Q 003313 429 NKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKL-GVCVKMITGDHLAIAKETGRRLG 507 (831)
Q Consensus 429 ~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~-Gi~v~m~TGD~~~~a~~ia~~~g 507 (831)
+.+...+.|.+.+-|++ -++-+..--...++-++..+.++.|... ...++++||++.........-.|
T Consensus 11 ~~~~~a~~~~~~lDyDG-----------Tl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~ 79 (266)
T COG1877 11 EPYLNARKRLLFLDYDG-----------TLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPG 79 (266)
T ss_pred cccccccceEEEEeccc-----------cccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCC
Confidence 33444555667666665 1233344445566778899999999888 55799999999988877765333
Q ss_pred C
Q 003313 508 I 508 (831)
Q Consensus 508 i 508 (831)
|
T Consensus 80 i 80 (266)
T COG1877 80 I 80 (266)
T ss_pred c
Confidence 3
No 211
>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]
Probab=49.45 E-value=50 Score=34.98 Aligned_cols=136 Identities=18% Similarity=0.216 Sum_probs=77.6
Q ss_pred cCCCCCChHHHHHHHHhCCC-e---EEEEcCCCHHHHHH------HHHHhCCCCCCCCC---------------------
Q 003313 467 FDPPRHDSSDTIHRALKLGV-C---VKMITGDHLAIAKE------TGRRLGIGTNMYPS--------------------- 515 (831)
Q Consensus 467 ~D~lr~~~~~~I~~l~~~Gi-~---v~m~TGD~~~~a~~------ia~~~gi~~~~~~~--------------------- 515 (831)
.+++|.+.++-++.+++.+. . .+++.||++..-.+ .|+++|+....++-
T Consensus 9 A~~i~~~lk~~v~~~~~~~~~~P~LavilvgddpaS~~YV~~K~k~~~~iGi~~~~~~l~~~~t~~eLl~~I~~lN~D~~ 88 (283)
T COG0190 9 AEKIREELKEKVEALKAKGGFKPGLAVILVGDDPASQVYVRSKKKAAEEIGIASELYDLPEDITEEELLALIDELNADPE 88 (283)
T ss_pred HHHHHHHHHHHHHHHHhccCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCeeEEEeCCCcCCHHHHHHHHHHhcCCCC
Confidence 44567788888888887533 2 56777888754443 47788875421110
Q ss_pred --ccc-------------------cCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhh--cCCEEEEEcCCc--
Q 003313 516 --SLL-------------------LGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQE--KKHVVGMTGDGV-- 570 (831)
Q Consensus 516 --~~~-------------------~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~--~g~~v~~iGDG~-- 570 (831)
.++ ..++.|..+..++..+..+...+--|||..=.++++.+.- +|..+..+|-|.
T Consensus 89 v~GIlVQlPLp~hld~~~il~~I~p~KDVDG~hp~N~g~L~~~~~~~~PCTp~gi~~ll~~~~i~l~Gk~~vVVGrS~iV 168 (283)
T COG0190 89 VDGILVQLPLPKHLDEQKLLQAIDPEKDVDGFHPYNLGKLAQGEPGFLPCTPAGIMTLLEEYGIDLRGKNVVVVGRSNIV 168 (283)
T ss_pred CcEEEEeCCCCCCCCHHHHHhhcCcCCCccccChhHhcchhcCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcC
Confidence 000 0111111122222222222234556888887788887776 699999999863
Q ss_pred --cChhhhccCCeeEEec-C---chHHHhhhcCEEEeC
Q 003313 571 --NDAPALKKADIGIAVA-G---ATEAARGAADIVLTE 602 (831)
Q Consensus 571 --ND~~al~~AdvgIa~~-~---~~~~a~~aadivl~~ 602 (831)
-=+.+|..++..+.+- + ....-...||+++..
T Consensus 169 GkPla~lL~~~naTVtvcHs~T~~l~~~~k~ADIvv~A 206 (283)
T COG0190 169 GKPLALLLLNANATVTVCHSRTKDLASITKNADIVVVA 206 (283)
T ss_pred cHHHHHHHHhCCCEEEEEcCCCCCHHHHhhhCCEEEEe
Confidence 2345666666666663 1 222333578888764
No 212
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=48.64 E-value=50 Score=35.40 Aligned_cols=137 Identities=10% Similarity=0.141 Sum_probs=76.7
Q ss_pred ccCCCCCChHHHHHHHHhC-CCe---EEEEcCCCHHHH------HHHHHHhCCCCCCC--C-------------------
Q 003313 466 LFDPPRHDSSDTIHRALKL-GVC---VKMITGDHLAIA------KETGRRLGIGTNMY--P------------------- 514 (831)
Q Consensus 466 ~~D~lr~~~~~~I~~l~~~-Gi~---v~m~TGD~~~~a------~~ia~~~gi~~~~~--~------------------- 514 (831)
+.+++|++.++-++.+++. |++ .++.-||++... ...|+++||..... +
T Consensus 9 iA~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~ 88 (293)
T PRK14185 9 ISAQIKQEIAAEVAEIVAKGGKRPHLAAILVGHDGGSETYVANKVKACEECGFKSSLIRYESDVTEEELLAKVRELNQDD 88 (293)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 3456778888888888877 765 466778886543 44577888753110 0
Q ss_pred --Cccc-------------------cCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhh--cCCEEEEEcCCcc
Q 003313 515 --SSLL-------------------LGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQE--KKHVVGMTGDGVN 571 (831)
Q Consensus 515 --~~~~-------------------~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~--~g~~v~~iGDG~N 571 (831)
+.++ ..++.|..+..++..+......|.-|||..=.++++.++- .|+.|+.+|-+..
T Consensus 89 ~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~GK~vvViGrS~i 168 (293)
T PRK14185 89 DVDGFIVQLPLPKHISEQKVIEAIDYRKDVDGFHPINVGRMSIGLPCFVSATPNGILELLKRYHIETSGKKCVVLGRSNI 168 (293)
T ss_pred CCCeEEEecCCCCCCCHHHHHhccCcccCcCCCCHhhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCcc
Confidence 0000 0111111122223333322234566788777777777654 5999999999743
Q ss_pred ----Chhhhcc------CCeeEEecCch--HHHhhhcCEEEeC
Q 003313 572 ----DAPALKK------ADIGIAVAGAT--EAARGAADIVLTE 602 (831)
Q Consensus 572 ----D~~al~~------AdvgIa~~~~~--~~a~~aadivl~~ 602 (831)
=+.+|.. |.|-++-.... ...-..||+++..
T Consensus 169 VGkPla~lL~~~~~~~~aTVtvchs~T~nl~~~~~~ADIvIsA 211 (293)
T PRK14185 169 VGKPMAQLMMQKAYPGDCTVTVCHSRSKNLKKECLEADIIIAA 211 (293)
T ss_pred chHHHHHHHHcCCCCCCCEEEEecCCCCCHHHHHhhCCEEEEc
Confidence 3345543 45555544222 2223578999764
No 213
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=48.40 E-value=49 Score=35.32 Aligned_cols=137 Identities=16% Similarity=0.192 Sum_probs=75.1
Q ss_pred cccCCCCCChHHHHHHHHhC-CCe---EEEEcCCCHHH------HHHHHHHhCCCCCCCC--------------------
Q 003313 465 PLFDPPRHDSSDTIHRALKL-GVC---VKMITGDHLAI------AKETGRRLGIGTNMYP-------------------- 514 (831)
Q Consensus 465 ~~~D~lr~~~~~~I~~l~~~-Gi~---v~m~TGD~~~~------a~~ia~~~gi~~~~~~-------------------- 514 (831)
.+.+++|++.++-++.+++. |++ .++.-||++.. -...|+++||......
T Consensus 15 ~iA~~i~~~l~~~i~~l~~~~g~~P~Laii~vg~d~aS~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~LN~D 94 (287)
T PRK14176 15 ALAKKIEAEVRSGVERLKSNRGITPGLATILVGDDPASKMYVRLKHKACERVGIRAEDQFLPADTTQEELLELIDSLNKR 94 (287)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCeEEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 34566778888888888777 665 45667877543 3445778887431100
Q ss_pred ---Ccccc-------------------CCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhh--cCCEEEEEcCCc
Q 003313 515 ---SSLLL-------------------GRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQE--KKHVVGMTGDGV 570 (831)
Q Consensus 515 ---~~~~~-------------------~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~--~g~~v~~iGDG~ 570 (831)
+.++. .++.|..+..++..+...-.-|.-|||..=.++++.++- .|+.|+.+|-|.
T Consensus 95 ~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~g~~~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~ 174 (287)
T PRK14176 95 KDVHGILLQLPLPKHLDPQEAMEAIDPAKDADGFHPYNMGKLMIGDEGLVPCTPHGVIRALEEYGVDIEGKNAVIVGHSN 174 (287)
T ss_pred CCCCeEEEcCCCCCCCCHHHHHhccCccccccccChhhhhhHhcCCCCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCc
Confidence 00111 111111122222233222233566788777777777653 589999999985
Q ss_pred c----Chhhhcc--CCeeEEecCchH--HHhhhcCEEEe
Q 003313 571 N----DAPALKK--ADIGIAVAGATE--AARGAADIVLT 601 (831)
Q Consensus 571 N----D~~al~~--AdvgIa~~~~~~--~a~~aadivl~ 601 (831)
. =+.+|.. |.|-++-....+ .....||+++.
T Consensus 175 iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvv~ 213 (287)
T PRK14176 175 VVGKPMAAMLLNRNATVSVCHVFTDDLKKYTLDADILVV 213 (287)
T ss_pred ccHHHHHHHHHHCCCEEEEEeccCCCHHHHHhhCCEEEE
Confidence 2 2334444 444444432222 22357888874
No 214
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=47.75 E-value=31 Score=33.74 Aligned_cols=86 Identities=13% Similarity=0.064 Sum_probs=49.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEc-CCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMIT-GDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAE 547 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~T-GD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~ 547 (831)
.+-|+++++++.|++.|+++.++| -+.+..|+++-+.+++..... ....- .+.--+...-|.
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~--~~~~~---------------~~~F~~~eI~~g 107 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADG--DGVPL---------------IEYFDYLEIYPG 107 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C---------------------------CCECEEEESSS
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCcccc--ccccc---------------hhhcchhheecC
Confidence 356899999999999999999999 588999999999999961100 00000 000014556677
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCcc
Q 003313 548 HKYEIVKILQEK----KHVVGMTGDGVN 571 (831)
Q Consensus 548 ~K~~iv~~l~~~----g~~v~~iGDG~N 571 (831)
.|.+-.+.++++ -..++++=|-..
T Consensus 108 sK~~Hf~~i~~~tgI~y~eMlFFDDe~~ 135 (169)
T PF12689_consen 108 SKTTHFRRIHRKTGIPYEEMLFFDDESR 135 (169)
T ss_dssp -HHHHHHHHHHHH---GGGEEEEES-HH
T ss_pred chHHHHHHHHHhcCCChhHEEEecCchh
Confidence 777777777653 234666666443
No 215
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=46.68 E-value=50 Score=31.85 Aligned_cols=41 Identities=17% Similarity=0.056 Sum_probs=37.3
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGT 510 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~ 510 (831)
.+||++.+.+++|++. +++.+.|.-....|..+.+.++...
T Consensus 58 ~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~ 98 (156)
T TIGR02250 58 KLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDG 98 (156)
T ss_pred EECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCC
Confidence 5799999999999955 9999999999999999999998753
No 216
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=46.60 E-value=59 Score=35.46 Aligned_cols=49 Identities=22% Similarity=0.198 Sum_probs=39.1
Q ss_pred eeeccccCCCCCChHHHHHHHHhC----CCeEEEEcCCC---HH-HHHHHHHHhCCC
Q 003313 461 CGLLPLFDPPRHDSSDTIHRALKL----GVCVKMITGDH---LA-IAKETGRRLGIG 509 (831)
Q Consensus 461 lG~i~~~D~lr~~~~~~I~~l~~~----Gi~v~m~TGD~---~~-~a~~ia~~~gi~ 509 (831)
=|++.-.+++-+++.++++.|++. |+++..+|-.. .. .+..+.+++|+.
T Consensus 8 DGvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 8 DGVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred cCceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 377777888999999999999999 99999999665 33 355566778874
No 217
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=45.29 E-value=54 Score=36.11 Aligned_cols=139 Identities=19% Similarity=0.240 Sum_probs=75.6
Q ss_pred ccccCCCCCChHHHHHHHHhC-CCe---EEEEcCCCHHHH------HHHHHHhCCCCCCC------C-------------
Q 003313 464 LPLFDPPRHDSSDTIHRALKL-GVC---VKMITGDHLAIA------KETGRRLGIGTNMY------P------------- 514 (831)
Q Consensus 464 i~~~D~lr~~~~~~I~~l~~~-Gi~---v~m~TGD~~~~a------~~ia~~~gi~~~~~------~------------- 514 (831)
-.+.+++|++.++.++++++. |++ .+++-||++... ...|+++||..... .
T Consensus 79 k~iA~~i~~~lk~~v~~lk~~~g~~P~LaiIlvG~dpaS~~Yv~~k~K~~e~~GI~~~~~~lpe~~te~ell~~I~~LN~ 158 (364)
T PLN02616 79 KAVAKKIRDEITIEVSRMKESIGVVPGLAVILVGDRKDSATYVRNKKKACDSVGINSFEVRLPEDSTEQEVLKFISGFNN 158 (364)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcC
Confidence 345667788888888888876 664 556678876533 44577788752110 0
Q ss_pred ----Ccccc-------------------CCcCCCCCcccHHHHHHh--cCcEEEeChHHHHHHHHHHhh--cCCEEEEEc
Q 003313 515 ----SSLLL-------------------GRDKDENEALPVDELIEK--ADGFTDVFAEHKYEIVKILQE--KKHVVGMTG 567 (831)
Q Consensus 515 ----~~~~~-------------------~~~~~~~~~~~~~~~~~~--~~v~~~~~P~~K~~iv~~l~~--~g~~v~~iG 567 (831)
+.++. .++.|..+..++-.+... ...|.-|||..=.++++.+.. .|+.|..+|
T Consensus 159 D~~V~GIlVQlPLP~~id~~~i~~aI~P~KDVDGl~p~N~G~L~~g~~~~~f~PCTp~avielL~~y~i~l~GK~vvVIG 238 (364)
T PLN02616 159 DPSVHGILVQLPLPSHMDEQNILNAVSIEKDVDGFHPLNIGRLAMRGREPLFVPCTPKGCIELLHRYNVEIKGKRAVVIG 238 (364)
T ss_pred CCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEEC
Confidence 00010 111111122222233321 234566788776666665543 489999999
Q ss_pred CCcc----Chhhhcc--CCeeEEecCc--hHHHhhhcCEEEeC
Q 003313 568 DGVN----DAPALKK--ADIGIAVAGA--TEAARGAADIVLTE 602 (831)
Q Consensus 568 DG~N----D~~al~~--AdvgIa~~~~--~~~a~~aadivl~~ 602 (831)
-+.- =+-+|.. |.|-++-... -...-..||+++.-
T Consensus 239 RS~iVGkPLa~LL~~~~ATVTicHs~T~nl~~~~r~ADIVIsA 281 (364)
T PLN02616 239 RSNIVGMPAALLLQREDATVSIVHSRTKNPEEITREADIIISA 281 (364)
T ss_pred CCccccHHHHHHHHHCCCeEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 9643 3345544 4455554422 22233578998764
No 218
>PLN03190 aminophospholipid translocase; Provisional
Probab=44.88 E-value=2.7e+02 Score=36.19 Aligned_cols=113 Identities=12% Similarity=0.084 Sum_probs=70.2
Q ss_pred HHHHhcCCCccCCCCCcHHHHHHHHHHhHHHHHHHHHHH---HHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 003313 48 VRLKFFGSNKLEKKPENKFLKFLSFMWNPLSWVMETAAL---MAIALANGGGQGPDWQDSVGIVCLLIINSSISFIEESN 124 (831)
Q Consensus 48 ~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~i~ai---l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~~ 124 (831)
++.+..-.|.+..-+...|.+|- .+.|.++++..+.-. ++..- + ...+...++++++..+...++.+.+++
T Consensus 90 N~i~TsKYt~~tFlP~~L~eQF~-r~aN~YFL~I~ilq~ip~~s~~~--~---~t~~~PL~~vl~v~~ike~~Ed~~r~k 163 (1178)
T PLN03190 90 NSIRTAKYSVFSFLPRNLFEQFH-RVAYIYFLVIAVLNQLPQLAVFG--R---GASILPLAFVLLVTAVKDAYEDWRRHR 163 (1178)
T ss_pred CeeeccccccHHHHHHHHHHHHH-hhhhHHHHHHHHHHhCCCcccCC--c---chHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34443344444444445555553 344444443333322 22221 1 126778888999999999999999999
Q ss_pred HHHHHHHHhccC---CCeEEE----EECCEEEEEeCCCcCCCcEEEEcC
Q 003313 125 AENATAALMAHL---TPKTKV----LRDGQWKEQDAAVLVPGDIISIKF 166 (831)
Q Consensus 125 ~~~~~~~l~~~~---~~~~~V----~rdg~~~~i~~~~lv~GDiI~l~~ 166 (831)
+++..+.-.... .....+ ++-|....+...|.+|-|.+.+..
T Consensus 164 ~d~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~S 212 (1178)
T PLN03190 164 SDRIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLST 212 (1178)
T ss_pred hHHhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEec
Confidence 998876654331 112222 345888999999999999999973
No 219
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=44.83 E-value=35 Score=36.35 Aligned_cols=136 Identities=16% Similarity=0.168 Sum_probs=77.1
Q ss_pred cCCCCCChHHHHHHHHhCCCe---EEEEcCCCHHHH------HHHHHHhCCCCCCCC-----------------------
Q 003313 467 FDPPRHDSSDTIHRALKLGVC---VKMITGDHLAIA------KETGRRLGIGTNMYP----------------------- 514 (831)
Q Consensus 467 ~D~lr~~~~~~I~~l~~~Gi~---v~m~TGD~~~~a------~~ia~~~gi~~~~~~----------------------- 514 (831)
.+.++++.++.++.+++.|++ .++.-||++... ...|+++||......
T Consensus 10 a~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~V 89 (282)
T PRK14166 10 SAKIKEELKEKNQFLKSKGIESCLAVILVGDNPASQTYVKSKAKACEECGIKSLVYHLNENTTQNELLALINTLNHDDSV 89 (282)
T ss_pred HHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCC
Confidence 455677888889999888876 466778886543 445788888531110
Q ss_pred Cccc-------------------cCCcCCCCCcccHHHHHHh-cCcEEEeChHHHHHHHHHHhh--cCCEEEEEcCCcc-
Q 003313 515 SSLL-------------------LGRDKDENEALPVDELIEK-ADGFTDVFAEHKYEIVKILQE--KKHVVGMTGDGVN- 571 (831)
Q Consensus 515 ~~~~-------------------~~~~~~~~~~~~~~~~~~~-~~v~~~~~P~~K~~iv~~l~~--~g~~v~~iGDG~N- 571 (831)
+.++ ..++.|..+..++..+... ...|.-|||..=.++++.++- .|+.|+++|-+..
T Consensus 90 ~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~g~~~~~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~iV 169 (282)
T PRK14166 90 HGILVQLPLPDHICKDLILESIISSKDVDGFHPINVGYLNLGLESGFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIV 169 (282)
T ss_pred CEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhcCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcc
Confidence 0001 0111122222233333322 124566788777777777653 5899999999754
Q ss_pred ---ChhhhccCCeeEEe--cCch--HHHhhhcCEEEeC
Q 003313 572 ---DAPALKKADIGIAV--AGAT--EAARGAADIVLTE 602 (831)
Q Consensus 572 ---D~~al~~AdvgIa~--~~~~--~~a~~aadivl~~ 602 (831)
=+.+|...+.-+.+ .... ......||+++..
T Consensus 170 GkPla~lL~~~~atVt~chs~T~nl~~~~~~ADIvIsA 207 (282)
T PRK14166 170 GRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVA 207 (282)
T ss_pred hHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 33455544544444 3211 2233578888764
No 220
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=43.50 E-value=7.9e+02 Score=31.11 Aligned_cols=74 Identities=18% Similarity=0.203 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC------------eEEE----EECCEEEEEeCCCcCCCcEEEEcCCCc
Q 003313 106 GIVCLLIINSSISFIEESNAENATAALMAHLTP------------KTKV----LRDGQWKEQDAAVLVPGDIISIKFGDV 169 (831)
Q Consensus 106 ~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~------------~~~V----~rdg~~~~i~~~~lv~GDiI~l~~G~~ 169 (831)
+++++..+...+.-+...++.++++++...... ...| +.-|....+...|.+|-|.+.++.. -
T Consensus 119 ~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~-~ 197 (903)
T PRK15122 119 TMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESR-D 197 (903)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcC-c
Confidence 334444444555555666666677776543221 1222 2347888999999999999888742 2
Q ss_pred cccceEEEecC
Q 003313 170 IPADARLLEGD 180 (831)
Q Consensus 170 iPaDg~ll~g~ 180 (831)
+-+|=-.+.|+
T Consensus 198 l~VDES~LTGE 208 (903)
T PRK15122 198 LFISQAVLTGE 208 (903)
T ss_pred eEEEccccCCC
Confidence 33344444443
No 221
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=42.16 E-value=62 Score=34.44 Aligned_cols=72 Identities=17% Similarity=0.262 Sum_probs=42.8
Q ss_pred HHHHHHhcCcEEEeChHHHHHHHHHHhh--cCCEEEEEcCCcc-Chh---hhcc--CCeeEEecCchH--HHhhhcCEEE
Q 003313 531 VDELIEKADGFTDVFAEHKYEIVKILQE--KKHVVGMTGDGVN-DAP---ALKK--ADIGIAVAGATE--AARGAADIVL 600 (831)
Q Consensus 531 ~~~~~~~~~v~~~~~P~~K~~iv~~l~~--~g~~v~~iGDG~N-D~~---al~~--AdvgIa~~~~~~--~a~~aadivl 600 (831)
+..+......|.-+||..=.++++.+.- .|..|..+|-+.. =-| +|.. |.|-++-....+ ..-..||+++
T Consensus 121 ~g~l~~~~~~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~~~~~ADIvI 200 (279)
T PRK14178 121 LGRLVSGLPGFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLKAELRQADILV 200 (279)
T ss_pred HHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHHHHHhhCCEEE
Confidence 3333333334667788777777777653 5899999999843 334 5543 445555443322 2335788887
Q ss_pred eC
Q 003313 601 TE 602 (831)
Q Consensus 601 ~~ 602 (831)
..
T Consensus 201 ~A 202 (279)
T PRK14178 201 SA 202 (279)
T ss_pred EC
Confidence 54
No 222
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=41.55 E-value=1.5e+02 Score=27.29 Aligned_cols=36 Identities=22% Similarity=0.374 Sum_probs=25.6
Q ss_pred HHHHHHHhhcCCEEEEEcCCcc--ChhhhccCCeeEEec
Q 003313 550 YEIVKILQEKKHVVGMTGDGVN--DAPALKKADIGIAVA 586 (831)
Q Consensus 550 ~~iv~~l~~~g~~v~~iGDG~N--D~~al~~AdvgIa~~ 586 (831)
.++++.+ .+-+.+...|-|.| |..++++-+|-++-.
T Consensus 52 ~~~l~~~-~~Lk~I~~~~~G~d~id~~~a~~~gI~V~n~ 89 (133)
T PF00389_consen 52 AEVLEAA-PNLKLISTAGAGVDNIDLEAAKERGIPVTNV 89 (133)
T ss_dssp HHHHHHH-TT-SEEEESSSSCTTB-HHHHHHTTSEEEE-
T ss_pred HHHHhcc-ceeEEEEEcccccCcccHHHHhhCeEEEEEe
Confidence 4455555 34457889999998 888999999988874
No 223
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=41.42 E-value=34 Score=31.16 Aligned_cols=40 Identities=28% Similarity=0.357 Sum_probs=30.4
Q ss_pred CCCChHHHHHHHHhCCCe-EEEEcCCCHHHHHHHHHHhCCC
Q 003313 470 PRHDSSDTIHRALKLGVC-VKMITGDHLAIAKETGRRLGIG 509 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~-v~m~TGD~~~~a~~ia~~~gi~ 509 (831)
+.+.+.+.++++.+.|++ +|+.+|.....+...|++.|+.
T Consensus 64 ~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi~ 104 (116)
T PF13380_consen 64 PPDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGIR 104 (116)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-E
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCCE
Confidence 445788999999999997 9999999999999999999873
No 224
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=40.98 E-value=42 Score=27.63 Aligned_cols=50 Identities=26% Similarity=0.246 Sum_probs=33.7
Q ss_pred HHHHHHhhcCCEEEEEcCC-ccChhhhccCCeeEEe---cC-chHHH---hhhcCEEE
Q 003313 551 EIVKILQEKKHVVGMTGDG-VNDAPALKKADIGIAV---AG-ATEAA---RGAADIVL 600 (831)
Q Consensus 551 ~iv~~l~~~g~~v~~iGDG-~ND~~al~~AdvgIa~---~~-~~~~a---~~aadivl 600 (831)
...+.+......+.||||. ..|+.+=+++++--.. |. ..+.. ...+|+|+
T Consensus 12 ~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv 69 (75)
T PF13242_consen 12 QALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVV 69 (75)
T ss_dssp HHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEE
T ss_pred HHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEE
Confidence 3444554445679999999 9999999999875544 32 11222 35788887
No 225
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=39.76 E-value=44 Score=35.60 Aligned_cols=137 Identities=14% Similarity=0.162 Sum_probs=75.7
Q ss_pred ccCCCCCChHHHHHHHHhC-CCe---EEEEcCCCHHH------HHHHHHHhCCCCCCCC---------------------
Q 003313 466 LFDPPRHDSSDTIHRALKL-GVC---VKMITGDHLAI------AKETGRRLGIGTNMYP--------------------- 514 (831)
Q Consensus 466 ~~D~lr~~~~~~I~~l~~~-Gi~---v~m~TGD~~~~------a~~ia~~~gi~~~~~~--------------------- 514 (831)
+.+++|++.++.++.+++. |++ +.++-||++.. -...|+++||......
T Consensus 9 va~~i~~~lk~~v~~~~~~~g~~P~La~I~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~ 88 (282)
T PRK14180 9 LSKDLKERLATQVQEYKHHTAITPKLVAIIVGNDPASKTYVASKEKACAQVGIDSQVITLPEHTTESELLELIDQLNNDS 88 (282)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 3456778888889988876 665 46677888654 3445777888532110
Q ss_pred --Ccccc-------------------CCcCCCCCcccHHHHHHh-cCcEEEeChHHHHHHHHHHhh--cCCEEEEEcCCc
Q 003313 515 --SSLLL-------------------GRDKDENEALPVDELIEK-ADGFTDVFAEHKYEIVKILQE--KKHVVGMTGDGV 570 (831)
Q Consensus 515 --~~~~~-------------------~~~~~~~~~~~~~~~~~~-~~v~~~~~P~~K~~iv~~l~~--~g~~v~~iGDG~ 570 (831)
+.++. .++.|..+..++..+... ..-|.-|||..=.++++.++. .|+.|+++|-+.
T Consensus 89 ~V~GIivq~PlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS~ 168 (282)
T PRK14180 89 SVHAILVQLPLPAHINKNNVIYSIKPEKDVDGFHPTNVGRLQLRDKKCLESCTPKGIMTMLREYGIKTEGAYAVVVGASN 168 (282)
T ss_pred CCCeEEEcCCCCCCCCHHHHHhhcCccccccccChhhHHHHhcCCCCCcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC
Confidence 00111 111111222233333322 234566788777777777654 499999999974
Q ss_pred c----Chhhhcc--CCeeEEecCchHH--HhhhcCEEEeC
Q 003313 571 N----DAPALKK--ADIGIAVAGATEA--ARGAADIVLTE 602 (831)
Q Consensus 571 N----D~~al~~--AdvgIa~~~~~~~--a~~aadivl~~ 602 (831)
. =+-+|.. |.|-++-....+. .-..||+++..
T Consensus 169 ~VGkPla~lL~~~~ATVt~chs~T~dl~~~~k~ADIvIsA 208 (282)
T PRK14180 169 VVGKPVSQLLLNAKATVTTCHRFTTDLKSHTTKADILIVA 208 (282)
T ss_pred cchHHHHHHHHHCCCEEEEEcCCCCCHHHHhhhcCEEEEc
Confidence 3 2334543 4444443322222 23568888763
No 226
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=39.46 E-value=88 Score=33.56 Aligned_cols=137 Identities=13% Similarity=0.138 Sum_probs=74.8
Q ss_pred ccCCCCCChHHHHHHHHhC-CCe---EEEEcCCCHHHH------HHHHHHhCCCCCCCC---------------------
Q 003313 466 LFDPPRHDSSDTIHRALKL-GVC---VKMITGDHLAIA------KETGRRLGIGTNMYP--------------------- 514 (831)
Q Consensus 466 ~~D~lr~~~~~~I~~l~~~-Gi~---v~m~TGD~~~~a------~~ia~~~gi~~~~~~--------------------- 514 (831)
+.+.+|++.++.++.+++. |++ .++.-||++... ...|+++||......
T Consensus 10 va~~i~~~lk~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~e~~l~~~I~~lN~d~ 89 (294)
T PRK14187 10 IANDITEILATCIDDLKRQHNLFPCLIVILVGDDPASQLYVRNKQRKAEMLGLRSETILLPSTISESSLIEKINELNNDD 89 (294)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 3456777888888888776 775 466678886533 445777887531110
Q ss_pred --Ccccc-------------------CCcCCCCCcccHHHHHHhc--CcEEEeChHHHHHHHHHHhh--cCCEEEEEcCC
Q 003313 515 --SSLLL-------------------GRDKDENEALPVDELIEKA--DGFTDVFAEHKYEIVKILQE--KKHVVGMTGDG 569 (831)
Q Consensus 515 --~~~~~-------------------~~~~~~~~~~~~~~~~~~~--~v~~~~~P~~K~~iv~~l~~--~g~~v~~iGDG 569 (831)
+.++- .++.|..+..++..+...- ..|.-|||..=.++++.+.- .|+.|+++|-+
T Consensus 90 ~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS 169 (294)
T PRK14187 90 SVHGILVQLPVPNHIDKNLIINTIDPEKDVDGFHNENVGRLFTGQKKNCLIPCTPKGCLYLIKTITRNLSGSDAVVIGRS 169 (294)
T ss_pred CCCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhHHHHhCCCCCCCccCcCHHHHHHHHHHhCCCCCCCEEEEECCC
Confidence 00110 1111112222333333221 24667788777777776643 58999999997
Q ss_pred cc----ChhhhccC--CeeEEecCchH--HHhhhcCEEEeC
Q 003313 570 VN----DAPALKKA--DIGIAVAGATE--AARGAADIVLTE 602 (831)
Q Consensus 570 ~N----D~~al~~A--dvgIa~~~~~~--~a~~aadivl~~ 602 (831)
.. =+-+|... .|-++-....+ ..-..||+++..
T Consensus 170 ~iVGkPla~lL~~~~aTVt~chs~T~~l~~~~~~ADIvVsA 210 (294)
T PRK14187 170 NIVGKPMACLLLGENCTVTTVHSATRDLADYCSKADILVAA 210 (294)
T ss_pred ccchHHHHHHHhhCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 43 33455444 44444342222 233578888764
No 227
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=38.97 E-value=71 Score=26.12 Aligned_cols=32 Identities=19% Similarity=0.101 Sum_probs=24.3
Q ss_pred CCeEEEEECCEEEEEeC---CCcCCCcEEEEcCCC
Q 003313 137 TPKTKVLRDGQWKEQDA---AVLVPGDIISIKFGD 168 (831)
Q Consensus 137 ~~~~~V~rdg~~~~i~~---~~lv~GDiI~l~~G~ 168 (831)
...++|-.+|..++++. .++.|||.|.+..|-
T Consensus 16 ~~~A~v~~~G~~~~V~~~lv~~v~~Gd~VLVHaG~ 50 (68)
T PF01455_consen 16 GGMAVVDFGGVRREVSLALVPDVKVGDYVLVHAGF 50 (68)
T ss_dssp TTEEEEEETTEEEEEEGTTCTSB-TT-EEEEETTE
T ss_pred CCEEEEEcCCcEEEEEEEEeCCCCCCCEEEEecCh
Confidence 45678888999888865 468899999999984
No 228
>PF15584 Imm44: Immunity protein 44
Probab=37.33 E-value=16 Score=31.36 Aligned_cols=20 Identities=35% Similarity=0.370 Sum_probs=16.3
Q ss_pred CCcEEEEcCCCccccceEEE
Q 003313 158 PGDIISIKFGDVIPADARLL 177 (831)
Q Consensus 158 ~GDiI~l~~G~~iPaDg~ll 177 (831)
+.+-..|+.|++|||||+--
T Consensus 13 ~~~~~~I~SG~~iP~~GIwE 32 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIWE 32 (94)
T ss_pred CCCCCEEecCCCcccCCeEc
Confidence 45567889999999999863
No 229
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=37.27 E-value=99 Score=33.09 Aligned_cols=64 Identities=19% Similarity=0.218 Sum_probs=39.4
Q ss_pred CcEEEeChHHHHHHHHHHhh--cCCEEEEEcCCcc----ChhhhccCCeeEEe--cCchHH--HhhhcCEEEeC
Q 003313 539 DGFTDVFAEHKYEIVKILQE--KKHVVGMTGDGVN----DAPALKKADIGIAV--AGATEA--ARGAADIVLTE 602 (831)
Q Consensus 539 ~v~~~~~P~~K~~iv~~l~~--~g~~v~~iGDG~N----D~~al~~AdvgIa~--~~~~~~--a~~aadivl~~ 602 (831)
..|.-|||..=.++++.++- .|+.|+.+|-+.. =+.+|...|.-+.+ ....+. .-..||+++..
T Consensus 136 ~~~~PcTp~av~~lL~~y~i~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~L~~~~~~ADIvV~A 209 (288)
T PRK14171 136 QGFIPCTALGCLAVIKKYEPNLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHNLSSITSKADIVVAA 209 (288)
T ss_pred CCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 44667788776677766653 5899999999743 33455444444444 333222 23578999864
No 230
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=36.81 E-value=17 Score=35.86 Aligned_cols=14 Identities=14% Similarity=-0.145 Sum_probs=12.5
Q ss_pred EEecCCCccccCce
Q 003313 307 LCSVKTAALTLNRL 320 (831)
Q Consensus 307 i~~DKTGTLT~~~~ 320 (831)
+|||.+||||.+.+
T Consensus 1 v~fD~DGTL~~~~~ 14 (192)
T PF12710_consen 1 VIFDFDGTLTDSDS 14 (192)
T ss_dssp EEEESBTTTBSSHH
T ss_pred eEEecCcCeecCCC
Confidence 69999999999973
No 231
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=36.39 E-value=87 Score=33.68 Aligned_cols=137 Identities=17% Similarity=0.160 Sum_probs=74.8
Q ss_pred ccCCCCCChHHHHHHHHhC-CCe---EEEEcCCCHHH------HHHHHHHhCCCCCCC------C---------------
Q 003313 466 LFDPPRHDSSDTIHRALKL-GVC---VKMITGDHLAI------AKETGRRLGIGTNMY------P--------------- 514 (831)
Q Consensus 466 ~~D~lr~~~~~~I~~l~~~-Gi~---v~m~TGD~~~~------a~~ia~~~gi~~~~~------~--------------- 514 (831)
+.++++++.++-++++++. |++ .++.-||++.. ....|+++||..... +
T Consensus 11 iA~~i~~~lk~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~D~ 90 (297)
T PRK14168 11 IREEILEEIRGEVAELKEKYGKVPGLVTILVGESPASLSYVTLKIKTAHRLGFHEIQDNQSVDITEEELLALIDKYNNDD 90 (297)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 4456777888888888776 664 56667888653 344577888753110 0
Q ss_pred --Ccccc-------------------CCcCCCCCcccHHHHHHhc--CcEEEeChHHHHHHHHHHhh--cCCEEEEEcCC
Q 003313 515 --SSLLL-------------------GRDKDENEALPVDELIEKA--DGFTDVFAEHKYEIVKILQE--KKHVVGMTGDG 569 (831)
Q Consensus 515 --~~~~~-------------------~~~~~~~~~~~~~~~~~~~--~v~~~~~P~~K~~iv~~l~~--~g~~v~~iGDG 569 (831)
+.++. .++.|..+..++..+...- ..|.-|||..=.++++.+.- .|+.|+++|.+
T Consensus 91 ~V~GIivqlPlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS 170 (297)
T PRK14168 91 SIHGILVQLPLPKHINEKKVLNAIDPDKDVDGFHPVNVGRLMIGGDEVKFLPCTPAGIQEMLVRSGVETSGAEVVVVGRS 170 (297)
T ss_pred CCCEEEEeCCCCCCCCHHHHHhccCccccccccChhhHHHHhcCCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCC
Confidence 00010 1111111222233332221 23566777766666666543 58999999997
Q ss_pred cc----Chhhhcc------CCeeEEecCchH--HHhhhcCEEEeC
Q 003313 570 VN----DAPALKK------ADIGIAVAGATE--AARGAADIVLTE 602 (831)
Q Consensus 570 ~N----D~~al~~------AdvgIa~~~~~~--~a~~aadivl~~ 602 (831)
.. =+-+|.. |-|-++-....+ .....||+++.-
T Consensus 171 ~iVGkPla~lL~~~~~~~~atVtv~hs~T~~l~~~~~~ADIvVsA 215 (297)
T PRK14168 171 NIVGKPIANMMTQKGPGANATVTIVHTRSKNLARHCQRADILIVA 215 (297)
T ss_pred CcccHHHHHHHHhcccCCCCEEEEecCCCcCHHHHHhhCCEEEEe
Confidence 43 2334432 456665542222 234678999863
No 232
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=36.34 E-value=19 Score=30.55 Aligned_cols=22 Identities=32% Similarity=0.513 Sum_probs=16.6
Q ss_pred EeCCCcCCCcEEEE-cCCCcccc
Q 003313 151 QDAAVLVPGDIISI-KFGDVIPA 172 (831)
Q Consensus 151 i~~~~lv~GDiI~l-~~G~~iPa 172 (831)
+.-.+|.+||.|.+ ++||.||-
T Consensus 45 i~~~~i~~Gd~V~V~raGdVIP~ 67 (82)
T PF03120_consen 45 IKELDIRIGDTVLVTRAGDVIPK 67 (82)
T ss_dssp HHHTT-BBT-EEEEEEETTTEEE
T ss_pred HHHcCCCCCCEEEEEECCCccce
Confidence 44578999999998 58999995
No 233
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=36.32 E-value=1.6e+02 Score=30.56 Aligned_cols=84 Identities=12% Similarity=0.063 Sum_probs=52.4
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHHH----HHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeC
Q 003313 470 PRHDSSDTIHRALKLGVCVKMITGDHLAI----AKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVF 545 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~----a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 545 (831)
+=||+.|.++..-+.|.+|..+|.+..+. +..--++.|++....+. . ++-+ .
T Consensus 123 ~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~-~----------------------llkk-~ 178 (274)
T COG2503 123 AVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESH-L----------------------LLKK-D 178 (274)
T ss_pred cCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccc-e----------------------EEee-C
Confidence 44799999999999999999999988765 34444566775321111 1 1111 0
Q ss_pred hHHHHHHHHHHhhcCCEEEEEcCCccChhhhc
Q 003313 546 AEHKYEIVKILQEKKHVVGMTGDGVNDAPALK 577 (831)
Q Consensus 546 P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~ 577 (831)
-..|..--+.+++.-.+|+.+||..+|-....
T Consensus 179 ~k~Ke~R~~~v~k~~~iVm~vGDNl~DF~d~~ 210 (274)
T COG2503 179 KKSKEVRRQAVEKDYKIVMLVGDNLDDFGDNA 210 (274)
T ss_pred CCcHHHHHHHHhhccceeeEecCchhhhcchh
Confidence 11232223333345678999999998876543
No 234
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=35.97 E-value=79 Score=32.76 Aligned_cols=103 Identities=16% Similarity=0.087 Sum_probs=58.3
Q ss_pred CChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHH--
Q 003313 472 HDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHK-- 549 (831)
Q Consensus 472 ~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K-- 549 (831)
++..+++++||+.|..+.++|-=... ...+-..+|+.. .++.++..+.+ .-..|+-+
T Consensus 116 ~~~~~~lq~lR~~g~~l~iisN~d~r-~~~~l~~~~l~~-------------------~fD~vv~S~e~-g~~KPDp~If 174 (237)
T KOG3085|consen 116 DGMQELLQKLRKKGTILGIISNFDDR-LRLLLLPLGLSA-------------------YFDFVVESCEV-GLEKPDPRIF 174 (237)
T ss_pred cHHHHHHHHHHhCCeEEEEecCCcHH-HHHHhhccCHHH-------------------hhhhhhhhhhh-ccCCCChHHH
Confidence 45669999999999888888754332 224445556531 11122111111 11122222
Q ss_pred HHHHHHHhhcCCEEEEEcC-CccChhhhccCCee-EEecCchHHHhhh
Q 003313 550 YEIVKILQEKKHVVGMTGD-GVNDAPALKKADIG-IAVAGATEAARGA 595 (831)
Q Consensus 550 ~~iv~~l~~~g~~v~~iGD-G~ND~~al~~Advg-Ia~~~~~~~a~~a 595 (831)
...++.++-+...++++|| ..||...-+.++.- +-+.++....++.
T Consensus 175 ~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~~~~~~~ 222 (237)
T KOG3085|consen 175 QLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNSITALKEL 222 (237)
T ss_pred HHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEccccchhhhh
Confidence 3445555556678999999 57999887777653 3344555444443
No 235
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=35.75 E-value=50 Score=35.20 Aligned_cols=137 Identities=15% Similarity=0.206 Sum_probs=75.5
Q ss_pred ccCCCCCChHHHHHHHHhCCCeE---EEEcCCCHHH------HHHHHHHhCCCCCCCC----------------------
Q 003313 466 LFDPPRHDSSDTIHRALKLGVCV---KMITGDHLAI------AKETGRRLGIGTNMYP---------------------- 514 (831)
Q Consensus 466 ~~D~lr~~~~~~I~~l~~~Gi~v---~m~TGD~~~~------a~~ia~~~gi~~~~~~---------------------- 514 (831)
+.++++++.++.++.+++.|++. ++.-||++.. -...|+++|+......
T Consensus 11 va~~i~~~l~~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~D~~ 90 (284)
T PRK14193 11 TADEIKADLAERVAALKEKGITPGLGTVLVGDDPGSQAYVRGKHRDCAEVGITSIRRDLPADATQEELNAVIDELNADPA 90 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 44567788888889998888764 4557888653 3445788888531110
Q ss_pred -Ccccc-------------------CCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhh--cCCEEEEEcCCcc-
Q 003313 515 -SSLLL-------------------GRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQE--KKHVVGMTGDGVN- 571 (831)
Q Consensus 515 -~~~~~-------------------~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~--~g~~v~~iGDG~N- 571 (831)
+.++. .++.|..+..++..+...-..+.-|||..=.++++.++- .|+.++.+|-+..
T Consensus 91 V~GIlvqlPlP~~id~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrS~~V 170 (284)
T PRK14193 91 CTGYIVQLPLPKHLDENAVLERIDPAKDADGLHPTNLGRLVLNEPAPLPCTPRGIVHLLRRYDVELAGAHVVVIGRGVTV 170 (284)
T ss_pred CCEEEEeCCCCCCCCHHHHHhcCCcccCccCCChhhhhHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcc
Confidence 00011 111111122223333322233556788777777777654 4899999999754
Q ss_pred ---Chhhhcc--CC--eeEEecCch--HHHhhhcCEEEeC
Q 003313 572 ---DAPALKK--AD--IGIAVAGAT--EAARGAADIVLTE 602 (831)
Q Consensus 572 ---D~~al~~--Ad--vgIa~~~~~--~~a~~aadivl~~ 602 (831)
=+-+|.. .+ |-++-.... ......||+++.-
T Consensus 171 GkPla~lL~~~~~~atVtvchs~T~~l~~~~k~ADIvV~A 210 (284)
T PRK14193 171 GRPIGLLLTRRSENATVTLCHTGTRDLAAHTRRADIIVAA 210 (284)
T ss_pred hHHHHHHHhhccCCCEEEEeCCCCCCHHHHHHhCCEEEEe
Confidence 2334543 34 444443222 2233568888763
No 236
>PRK11507 ribosome-associated protein; Provisional
Probab=35.62 E-value=46 Score=27.33 Aligned_cols=26 Identities=23% Similarity=0.318 Sum_probs=22.6
Q ss_pred EEEECCEEEEEeCCCcCCCcEEEEcC
Q 003313 141 KVLRDGQWKEQDAAVLVPGDIISIKF 166 (831)
Q Consensus 141 ~V~rdg~~~~i~~~~lv~GDiI~l~~ 166 (831)
.|..||+...-.-..|.|||+|.+..
T Consensus 38 ~V~VNGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 38 QVKVDGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred ceEECCEEecccCCCCCCCCEEEECC
Confidence 46779999999999999999999854
No 237
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=35.15 E-value=54 Score=34.90 Aligned_cols=136 Identities=21% Similarity=0.220 Sum_probs=72.1
Q ss_pred cCCCCCChHHHHHHHHh-CCCe---EEEEcCCCHHH------HHHHHHHhCCCCCCCC----------------------
Q 003313 467 FDPPRHDSSDTIHRALK-LGVC---VKMITGDHLAI------AKETGRRLGIGTNMYP---------------------- 514 (831)
Q Consensus 467 ~D~lr~~~~~~I~~l~~-~Gi~---v~m~TGD~~~~------a~~ia~~~gi~~~~~~---------------------- 514 (831)
..++|.+.++-++.+++ .|++ .++.-||++.. -...|+++||......
T Consensus 10 A~~i~~~l~~~v~~l~~~~g~~P~Laii~vgdd~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~D~~ 89 (281)
T PRK14183 10 SDKIKENVKKEVDELKLVKNIVPGLAVILVGDDPASHTYVKMKAKACDRVGIYSITHEMPSTISQKEILETIAMMNNNPN 89 (281)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCc
Confidence 34567788888888876 4665 35566888653 3445778887531110
Q ss_pred -Ccccc-------------------CCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhh--cCCEEEEEcCCcc-
Q 003313 515 -SSLLL-------------------GRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQE--KKHVVGMTGDGVN- 571 (831)
Q Consensus 515 -~~~~~-------------------~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~--~g~~v~~iGDG~N- 571 (831)
+.++. .++.|..+..++..+...-.-|.-|||..=.++++.++- .|+.|+.+|.|..
T Consensus 90 V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~~V 169 (281)
T PRK14183 90 IDGILVQLPLPKHIDTTKILEAIDPKKDVDGFHPYNVGRLVTGLDGFVPCTPLGVMELLEEYEIDVKGKDVCVVGASNIV 169 (281)
T ss_pred cCeEEEeCCCCCCCCHHHHHhccCchhcccccChhhhhHHhcCCCCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCCcc
Confidence 00010 111111122222222222233556777776666666653 5899999999832
Q ss_pred ---Chhhhcc--CCeeEEecCch--HHHhhhcCEEEeC
Q 003313 572 ---DAPALKK--ADIGIAVAGAT--EAARGAADIVLTE 602 (831)
Q Consensus 572 ---D~~al~~--AdvgIa~~~~~--~~a~~aadivl~~ 602 (831)
=+-+|.. |.|-++-.... ...-..||+++..
T Consensus 170 G~Pla~lL~~~~AtVti~hs~T~~l~~~~~~ADIvV~A 207 (281)
T PRK14183 170 GKPMAALLLNANATVDICHIFTKDLKAHTKKADIVIVG 207 (281)
T ss_pred hHHHHHHHHHCCCEEEEeCCCCcCHHHHHhhCCEEEEe
Confidence 2334443 44444433222 2223578888764
No 238
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=35.09 E-value=76 Score=32.82 Aligned_cols=48 Identities=23% Similarity=0.236 Sum_probs=34.3
Q ss_pred eeccccCCCCCChHHHHHHHHhCCCeEEEEc---CCCHHHHHH-HHHHhCCC
Q 003313 462 GLLPLFDPPRHDSSDTIHRALKLGVCVKMIT---GDHLAIAKE-TGRRLGIG 509 (831)
Q Consensus 462 G~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~T---GD~~~~a~~-ia~~~gi~ 509 (831)
|++.-.+.+=+++.++|+.++++|++++++| |........ +.+..|+.
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~ 58 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVD 58 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCC
Confidence 5555556677899999999999999999999 555544433 33336663
No 239
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=34.90 E-value=23 Score=36.76 Aligned_cols=92 Identities=15% Similarity=0.110 Sum_probs=49.3
Q ss_pred CCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhc--C--cEEEeCh
Q 003313 471 RHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKA--D--GFTDVFA 546 (831)
Q Consensus 471 r~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--v~~~~~P 546 (831)
-++..++++.+++.|++. ++|+.....+.......|.. .+...++.. + ....-.|
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g--------------------~~~~~i~~~g~~~~~~gKP~~ 198 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAG--------------------YYAELIKQLGGKVIYSGKPYP 198 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEeccc--------------------HHHHHHHHhCCcEecCCCCCH
Confidence 368888999998899997 66776544332222222211 111111100 0 0111222
Q ss_pred HHHHHHHHHHhhc-CCEEEEEcCC-ccChhhhccCCeeE
Q 003313 547 EHKYEIVKILQEK-KHVVGMTGDG-VNDAPALKKADIGI 583 (831)
Q Consensus 547 ~~K~~iv~~l~~~-g~~v~~iGDG-~ND~~al~~AdvgI 583 (831)
+-=....+.+... .+.++|+||. .+|..+=+.|++-.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~ 237 (242)
T TIGR01459 199 AIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDT 237 (242)
T ss_pred HHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeE
Confidence 2223334444322 3479999999 59999888887653
No 240
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=34.86 E-value=76 Score=34.08 Aligned_cols=37 Identities=22% Similarity=0.236 Sum_probs=26.2
Q ss_pred ChHHHHHHHHhCCCeEEEEcCCCHHHH-HHHHHHhCCC
Q 003313 473 DSSDTIHRALKLGVCVKMITGDHLAIA-KETGRRLGIG 509 (831)
Q Consensus 473 ~~~~~I~~l~~~Gi~v~m~TGD~~~~a-~~ia~~~gi~ 509 (831)
++...-+.|+..|.+++++|.+....+ ++..+.++..
T Consensus 64 GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~~ 101 (291)
T PF14336_consen 64 GAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGLQ 101 (291)
T ss_pred HHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhhC
Confidence 455666788889999999998775544 4445556653
No 241
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=33.91 E-value=3.8e+02 Score=31.56 Aligned_cols=70 Identities=16% Similarity=0.164 Sum_probs=52.0
Q ss_pred ChHHHHHHHHhCCCeEEEEcCCCH-HHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHH
Q 003313 473 DSSDTIHRALKLGVCVKMITGDHL-AIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYE 551 (831)
Q Consensus 473 ~~~~~I~~l~~~Gi~v~m~TGD~~-~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~ 551 (831)
|+..+++.+++.+-++.+++=.+. ..+..++.-+++.- ..++-.++++-..
T Consensus 95 Dil~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l~~~i----------------------------~~~~~~~~~e~~~ 146 (538)
T PRK15424 95 DVMQALARARKLTSSIGVVTYQETIPALVAFQKTFNLRI----------------------------EQRSYVTEEDARG 146 (538)
T ss_pred HHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCce----------------------------EEEEecCHHHHHH
Confidence 577788888888778888877664 45566777777642 3577788899999
Q ss_pred HHHHHhhcCCEEEEEcCCcc
Q 003313 552 IVKILQEKKHVVGMTGDGVN 571 (831)
Q Consensus 552 iv~~l~~~g~~v~~iGDG~N 571 (831)
.++.++++|..+ ++||+.-
T Consensus 147 ~v~~lk~~G~~~-vvG~~~~ 165 (538)
T PRK15424 147 QINELKANGIEA-VVGAGLI 165 (538)
T ss_pred HHHHHHHCCCCE-EEcCchH
Confidence 999999999654 6688753
No 242
>PRK05585 yajC preprotein translocase subunit YajC; Validated
Probab=33.88 E-value=1.2e+02 Score=27.27 Aligned_cols=24 Identities=8% Similarity=0.230 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHHHhccCCCeEEEE
Q 003313 120 IEESNAENATAALMAHLTPKTKVL 143 (831)
Q Consensus 120 ~~~~~~~~~~~~l~~~~~~~~~V~ 143 (831)
...+|.++..+++.+...+--+|+
T Consensus 37 RpqkK~~k~~~~~~~~Lk~Gd~Vv 60 (106)
T PRK05585 37 RPQQKRQKEHKKMLSSLAKGDEVV 60 (106)
T ss_pred cHHHHHHHHHHHHHHhcCCCCEEE
Confidence 344455555555554444433443
No 243
>PF05568 ASFV_J13L: African swine fever virus J13L protein; InterPro: IPR008385 This family consists of several African swine fever virus (ASFV) j13L proteins [, , ].
Probab=33.09 E-value=1e+02 Score=28.74 Aligned_cols=32 Identities=22% Similarity=0.210 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHhccCCCeEEEEECCEEEEEe
Q 003313 121 EESNAENATAALMAHLTPKTKVLRDGQWKEQD 152 (831)
Q Consensus 121 ~~~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~ 152 (831)
...|.+|+..++.+.--+...+..|.+|-.++
T Consensus 52 cssRKkKaaAAi~eediQfinpyqDqqw~~v~ 83 (189)
T PF05568_consen 52 CSSRKKKAAAAIEEEDIQFINPYQDQQWAGVT 83 (189)
T ss_pred HhhhhHHHHhhhhhhcccccCcccchhhccCC
Confidence 33444455556655444455566666665443
No 244
>PF12368 DUF3650: Protein of unknown function (DUF3650) ; InterPro: IPR022111 This domain family is found in bacteria, and is approximately 30 amino acids in length. The family is found in association with PF00581 from PFAM. There is a single completely conserved residue N that may be functionally important.
Probab=32.67 E-value=36 Score=22.48 Aligned_cols=15 Identities=40% Similarity=0.558 Sum_probs=13.1
Q ss_pred CCCCCHHHHHHHHHh
Q 003313 38 RQGLSSEDAEVRLKF 52 (831)
Q Consensus 38 ~~GLs~~~~~~r~~~ 52 (831)
+.|||.+|+++|++.
T Consensus 13 eh~ls~ee~~~RL~~ 27 (28)
T PF12368_consen 13 EHGLSEEEVAERLAA 27 (28)
T ss_pred hcCCCHHHHHHHHHc
Confidence 579999999999874
No 245
>PRK04980 hypothetical protein; Provisional
Probab=32.64 E-value=55 Score=29.09 Aligned_cols=45 Identities=24% Similarity=0.378 Sum_probs=33.7
Q ss_pred CCCeEEEEECCEEEEEeCCCcCCCcEEEEc--CCCccccceEEEecCCeEEE
Q 003313 136 LTPKTKVLRDGQWKEQDAAVLVPGDIISIK--FGDVIPADARLLEGDPLKID 185 (831)
Q Consensus 136 ~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~--~G~~iPaDg~ll~g~~~~Vd 185 (831)
...+.--+||+. .+..+|||++.|. .+.+.-|+..+++-....+|
T Consensus 17 sGkKTiTiRd~s-----e~~~~~G~~~~V~~~e~g~~~c~ieI~sV~~i~f~ 63 (102)
T PRK04980 17 AGRKTITIRDES-----ESHFKPGDVLRVGTFEDDRYFCTIEVLSVSPVTFD 63 (102)
T ss_pred cCCceEEeeCCc-----ccCCCCCCEEEEEECCCCcEEEEEEEEEEEEEehh
Confidence 345666677753 3679999999998 88999999999986443333
No 246
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=32.51 E-value=61 Score=34.62 Aligned_cols=137 Identities=10% Similarity=0.110 Sum_probs=75.0
Q ss_pred ccCCCCCChHHHHHHHHhC-CCe---EEEEcCCCHHHH------HHHHHHhCCCCCCCC---------------------
Q 003313 466 LFDPPRHDSSDTIHRALKL-GVC---VKMITGDHLAIA------KETGRRLGIGTNMYP--------------------- 514 (831)
Q Consensus 466 ~~D~lr~~~~~~I~~l~~~-Gi~---v~m~TGD~~~~a------~~ia~~~gi~~~~~~--------------------- 514 (831)
+.+++|++.++.++.+++. |.+ .++.-||++... ...|+++||......
T Consensus 11 va~~i~~~lk~~v~~l~~~~~~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~d~ 90 (285)
T PRK10792 11 IAQQVRSEVAQKVQARVAAGLRAPGLAVVLVGSDPASQVYVASKRKACEEVGFVSRSYDLPETTSEAELLALIDELNADP 90 (285)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 4456778888899999877 442 466678886543 445778888531110
Q ss_pred --Ccccc-------------------CCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhh--cCCEEEEEcCCcc
Q 003313 515 --SSLLL-------------------GRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQE--KKHVVGMTGDGVN 571 (831)
Q Consensus 515 --~~~~~-------------------~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~--~g~~v~~iGDG~N 571 (831)
+.++. .++.|..+..++..+......|.-|||..=.++++.+.- .|+.|+.+|.|..
T Consensus 91 ~V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~i 170 (285)
T PRK10792 91 TIDGILVQLPLPAHIDNVKVLERIHPDKDVDGFHPYNVGRLAQRIPLLRPCTPRGIMTLLERYGIDTYGLNAVVVGASNI 170 (285)
T ss_pred CCCEEEEeCCCCCCCCHHHHHhccCcccccCccChhhHhHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCcc
Confidence 00110 111111122223333333334566788777777777654 4899999999852
Q ss_pred ----Chhhhcc--CCeeEEecCchH--HHhhhcCEEEeC
Q 003313 572 ----DAPALKK--ADIGIAVAGATE--AARGAADIVLTE 602 (831)
Q Consensus 572 ----D~~al~~--AdvgIa~~~~~~--~a~~aadivl~~ 602 (831)
=+.+|.. |.|-++-....+ ..-..||+++.-
T Consensus 171 VG~Pla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvi~a 209 (285)
T PRK10792 171 VGRPMSLELLLAGCTVTVCHRFTKNLRHHVRNADLLVVA 209 (285)
T ss_pred cHHHHHHHHHHCCCeEEEEECCCCCHHHHHhhCCEEEEc
Confidence 2234544 444444332222 223568888753
No 247
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=32.22 E-value=68 Score=34.21 Aligned_cols=137 Identities=17% Similarity=0.210 Sum_probs=74.1
Q ss_pred ccCCCCCChHHHHHHHHhCC-Ce---EEEEcCCCHHHH------HHHHHHhCCCCCCC------C---------------
Q 003313 466 LFDPPRHDSSDTIHRALKLG-VC---VKMITGDHLAIA------KETGRRLGIGTNMY------P--------------- 514 (831)
Q Consensus 466 ~~D~lr~~~~~~I~~l~~~G-i~---v~m~TGD~~~~a------~~ia~~~gi~~~~~------~--------------- 514 (831)
+.+++|++.++.++++++.| .+ .++.-||++... ...|+++||..... +
T Consensus 11 ia~~i~~~lk~~i~~l~~~~~~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~D~ 90 (284)
T PRK14177 11 LSEKIRNEIRETIEERKTKNKRIPKLATILVGNNPASETYVSMKVKACHKVGMGSEMIRLKEQTTTEELLGVIDKLNLDP 90 (284)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 45567788888888887763 32 466677775433 44577888753110 0
Q ss_pred --Ccccc-------------------CCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhh--cCCEEEEEcCCcc
Q 003313 515 --SSLLL-------------------GRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQE--KKHVVGMTGDGVN 571 (831)
Q Consensus 515 --~~~~~-------------------~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~--~g~~v~~iGDG~N 571 (831)
+.++. .++.|..+..++..+......|.-|||..=.++++.++- .|+.|+++|-+..
T Consensus 91 ~V~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~i 170 (284)
T PRK14177 91 NVDGILLQHPVPSQIDERAAFDRIALEKDVDGVTTLSFGKLSMGVETYLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPI 170 (284)
T ss_pred CCCeEEEcCCCCCCCCHHHHHhccCcccccccCChhhHHHHHcCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCc
Confidence 00110 111111222233333333334667788776677766653 5899999999743
Q ss_pred ----Chhhhcc--CCeeEEecCchH--HHhhhcCEEEeC
Q 003313 572 ----DAPALKK--ADIGIAVAGATE--AARGAADIVLTE 602 (831)
Q Consensus 572 ----D~~al~~--AdvgIa~~~~~~--~a~~aadivl~~ 602 (831)
=+.+|.. |.|-++-....+ .....||+++..
T Consensus 171 VGkPla~lL~~~~atVt~chs~T~~l~~~~~~ADIvIsA 209 (284)
T PRK14177 171 LGKPMAMLLTEMNATVTLCHSKTQNLPSIVRQADIIVGA 209 (284)
T ss_pred chHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEe
Confidence 2334544 444444332222 234578888764
No 248
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=32.12 E-value=1.2e+03 Score=29.89 Aligned_cols=64 Identities=13% Similarity=0.074 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-----CCe-EEE----EECCEEEEEeCCCcCCCcEEEEcCC
Q 003313 104 SVGIVCLLIINSSISFIEESNAENATAALMAHL-----TPK-TKV----LRDGQWKEQDAAVLVPGDIISIKFG 167 (831)
Q Consensus 104 ~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~-----~~~-~~V----~rdg~~~~i~~~~lv~GDiI~l~~G 167 (831)
.++++++..+.......+.+++-+++.++.... ..+ ..+ +.-|....+...+.+|.|.+.++..
T Consensus 110 i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~ 183 (997)
T TIGR01106 110 LSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQ 183 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEcc
Confidence 344455555556666777777777777663321 222 222 2347888999999999999999764
No 249
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=31.03 E-value=1.1e+02 Score=29.66 Aligned_cols=59 Identities=14% Similarity=0.111 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHH
Q 003313 421 GGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAK 500 (831)
Q Consensus 421 ~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~ 500 (831)
..-+..+++.+.+.|--.++++-.+- -+++.++++..++.|++++-+||++-..-.
T Consensus 96 d~vFsRqveA~g~~GDvLigISTSGN------------------------S~nVl~Ai~~Ak~~gm~vI~ltG~~GG~~~ 151 (176)
T COG0279 96 DEVFSRQVEALGQPGDVLIGISTSGN------------------------SKNVLKAIEAAKEKGMTVIALTGKDGGKLA 151 (176)
T ss_pred HHHHHHHHHhcCCCCCEEEEEeCCCC------------------------CHHHHHHHHHHHHcCCEEEEEecCCCcccc
Confidence 34456677778888866666665441 258899999999999999999999865444
Q ss_pred HHH
Q 003313 501 ETG 503 (831)
Q Consensus 501 ~ia 503 (831)
.++
T Consensus 152 ~~~ 154 (176)
T COG0279 152 GLL 154 (176)
T ss_pred ccc
Confidence 443
No 250
>COG0309 HypE Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]
Probab=29.80 E-value=2e+02 Score=31.36 Aligned_cols=85 Identities=16% Similarity=0.238 Sum_probs=63.0
Q ss_pred eccccCCCCCChHHHHHHHHhC-CCeEEEEcCCC--HHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcC
Q 003313 463 LLPLFDPPRHDSSDTIHRALKL-GVCVKMITGDH--LAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKAD 539 (831)
Q Consensus 463 ~i~~~D~lr~~~~~~I~~l~~~-Gi~v~m~TGD~--~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (831)
+.+++|+-|-+...++.++-++ |+.+.+--..- ...++.+|+.+||+. -.++.+-.
T Consensus 219 vtAMhDaTrGGla~aLnEmA~aSgvgi~I~ee~Ipv~~eVr~vce~lGiDP---------------------l~~anEG~ 277 (339)
T COG0309 219 VTAMHDATRGGLAGALNEMAEASGVGISIEEEKIPVREEVRGVCELLGLDP---------------------LELANEGK 277 (339)
T ss_pred hhhccCCchhHHHHHHHHHHHHcCCeEEEeeccccccHHHHHHHHHhCCCH---------------------HHhhcCce
Confidence 6679999999999999988655 66665544333 468899999999964 12223334
Q ss_pred cEEEeChHHHHHHHHHHhhcC-CEEEEEcC
Q 003313 540 GFTDVFAEHKYEIVKILQEKK-HVVGMTGD 568 (831)
Q Consensus 540 v~~~~~P~~K~~iv~~l~~~g-~~v~~iGD 568 (831)
+.+-+.|++-.+.++.|++.+ .....+|-
T Consensus 278 lv~~V~~~~a~~~l~~L~~~~~~~A~iIGe 307 (339)
T COG0309 278 LVIAVPPEHAEEVLEALRSHGLKDAAIIGE 307 (339)
T ss_pred EEEEECHHHHHHHHHHHHhcCCccceeEEE
Confidence 688889998889999999988 45555554
No 251
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=29.61 E-value=28 Score=28.15 Aligned_cols=24 Identities=29% Similarity=0.562 Sum_probs=13.6
Q ss_pred EEEECCEEEEEeCCCcCCCcEEEE
Q 003313 141 KVLRDGQWKEQDAAVLVPGDIISI 164 (831)
Q Consensus 141 ~V~rdg~~~~i~~~~lv~GDiI~l 164 (831)
.|..||+.+.-.-..|.+||+|.+
T Consensus 34 ~V~VNGe~e~rrg~Kl~~GD~V~~ 57 (65)
T PF13275_consen 34 EVKVNGEVETRRGKKLRPGDVVEI 57 (65)
T ss_dssp HHEETTB----SS----SSEEEEE
T ss_pred ceEECCEEccccCCcCCCCCEEEE
Confidence 356789988899999999999999
No 252
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=29.24 E-value=5.1e+02 Score=30.45 Aligned_cols=102 Identities=16% Similarity=0.132 Sum_probs=67.8
Q ss_pred ChHHHHHHHHhCCCeEEEEcCCCH-HHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHH
Q 003313 473 DSSDTIHRALKLGVCVKMITGDHL-AIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYE 551 (831)
Q Consensus 473 ~~~~~I~~l~~~Gi~v~m~TGD~~-~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~ 551 (831)
|+..+++.+++.+-++.+++=.+. ..+..++.-+++.- ..+.-.++++-..
T Consensus 85 Dil~al~~a~~~~~~ia~vg~~~~~~~~~~~~~ll~~~i----------------------------~~~~~~~~~e~~~ 136 (526)
T TIGR02329 85 DVMQALARARRIASSIGVVTHQDTPPALRRFQAAFNLDI----------------------------VQRSYVTEEDARS 136 (526)
T ss_pred hHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCce----------------------------EEEEecCHHHHHH
Confidence 577788888887778777776664 45666777777642 3577788899999
Q ss_pred HHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhh-cCEEEeCCChhHHHHHHHHhHHHHHH
Q 003313 552 IVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGA-ADIVLTEPGLSVICSAVLTSRTVFQI 621 (831)
Q Consensus 552 iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~a-adivl~~~~~~~i~~~i~~gR~~~~~ 621 (831)
.++.++++|..+ ++||+.- ++.|++. -..++..+. .+|..++..+...++-
T Consensus 137 ~~~~l~~~G~~~-viG~~~~-----------------~~~A~~~gl~~ili~s~-esi~~a~~~A~~~~~~ 188 (526)
T TIGR02329 137 CVNDLRARGIGA-VVGAGLI-----------------TDLAEQAGLHGVFLYSA-DSVRQAFDDALDVARA 188 (526)
T ss_pred HHHHHHHCCCCE-EECChHH-----------------HHHHHHcCCceEEEecH-HHHHHHHHHHHHHHHH
Confidence 999999999654 6698743 2222222 233344333 7777777777766543
No 253
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=28.78 E-value=62 Score=28.52 Aligned_cols=29 Identities=31% Similarity=0.542 Sum_probs=23.2
Q ss_pred EEEECCEEEEEeCCCcCCCcEEEEcCCCcc
Q 003313 141 KVLRDGQWKEQDAAVLVPGDIISIKFGDVI 170 (831)
Q Consensus 141 ~V~rdg~~~~i~~~~lv~GDiI~l~~G~~i 170 (831)
+|.-||+.. -++.++++||+|.|.-|...
T Consensus 35 rV~vNG~~a-KpS~~VK~GD~l~i~~~~~~ 63 (100)
T COG1188 35 RVKVNGQRA-KPSKEVKVGDILTIRFGNKE 63 (100)
T ss_pred eEEECCEEc-ccccccCCCCEEEEEeCCcE
Confidence 455577655 78999999999999988654
No 254
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=28.72 E-value=85 Score=28.74 Aligned_cols=80 Identities=18% Similarity=0.162 Sum_probs=54.2
Q ss_pred HHHhccCeeeeeeeecCCCC-CCCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCC-e-EEEEcCCCHHHHHHHHHHh
Q 003313 430 KLAEKGLRSLAVAVQEVPEM-TEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGV-C-VKMITGDHLAIAKETGRRL 506 (831)
Q Consensus 430 ~~~~~G~r~l~~a~~~~~~~-~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi-~-v~m~TGD~~~~a~~ia~~~ 506 (831)
-+...|++|+.+....-.++ .+.-.+.+-.++++-.......+.+++.+++|++.|. + .+++-|..+..-.+-.++.
T Consensus 22 ~l~~~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~~~~~~~~~ 101 (122)
T cd02071 22 ALRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGGIIPPEDYELLKEM 101 (122)
T ss_pred HHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHC
Confidence 46678999988776531111 0111234456888888888889999999999999977 4 4556665555445566788
Q ss_pred CCC
Q 003313 507 GIG 509 (831)
Q Consensus 507 gi~ 509 (831)
|++
T Consensus 102 G~d 104 (122)
T cd02071 102 GVA 104 (122)
T ss_pred CCC
Confidence 975
No 255
>COG5547 Small integral membrane protein [Function unknown]
Probab=28.64 E-value=2.9e+02 Score=21.68 Aligned_cols=48 Identities=17% Similarity=0.375 Sum_probs=27.4
Q ss_pred HHHHHHhHHH--HHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 003313 69 FLSFMWNPLS--WVMETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFIEESN 124 (831)
Q Consensus 69 ~~~~~~~~~~--~~l~i~ail~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~~ 124 (831)
++++++-|+. ++.++.|++-+.++ .|-. +.++++..++..++.+.+++
T Consensus 3 flk~fkypIIgglvglliAili~t~G-------fwKt-ilviil~~lGv~iGl~~~r~ 52 (62)
T COG5547 3 FLKKFKYPIIGGLVGLLIAILILTFG-------FWKT-ILVIILILLGVYIGLYKKRT 52 (62)
T ss_pred HHHHhccchHHHHHHHHHHHHHHHHH-------HHHH-HHHHHHHHHHHHHHHHHHhh
Confidence 5677777775 23334444444443 4444 44555666777777777665
No 256
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=28.33 E-value=1.3e+02 Score=30.85 Aligned_cols=38 Identities=13% Similarity=0.017 Sum_probs=30.0
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhC
Q 003313 470 PRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLG 507 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~g 507 (831)
+-||+.+.++.|+..|+.+.++|+-+..++..--...+
T Consensus 93 ~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~ 130 (222)
T KOG2914|consen 93 LMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHE 130 (222)
T ss_pred cCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhh
Confidence 44699999999999999999999997666544444433
No 257
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=27.36 E-value=2.4e+02 Score=29.88 Aligned_cols=35 Identities=14% Similarity=0.055 Sum_probs=25.7
Q ss_pred HHHHHHHhhcCCEEEEEcCCc-cChhhhccCCeeEE
Q 003313 550 YEIVKILQEKKHVVGMTGDGV-NDAPALKKADIGIA 584 (831)
Q Consensus 550 ~~iv~~l~~~g~~v~~iGDG~-ND~~al~~AdvgIa 584 (831)
..+++.+....+.++||||.. .|..+-++|++--.
T Consensus 209 ~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si 244 (279)
T TIGR01452 209 ECITENFSIDPARTLMVGDRLETDILFGHRCGMTTV 244 (279)
T ss_pred HHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEE
Confidence 334455544567899999995 99999888887643
No 258
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=26.57 E-value=56 Score=33.71 Aligned_cols=57 Identities=28% Similarity=0.336 Sum_probs=28.2
Q ss_pred HHHHHHHHHHhhc-C------CEEEEEcCCccChhhhccC------CeeEEecCch-HHHhhhcCEEEeCC
Q 003313 547 EHKYEIVKILQEK-K------HVVGMTGDGVNDAPALKKA------DIGIAVAGAT-EAARGAADIVLTEP 603 (831)
Q Consensus 547 ~~K~~iv~~l~~~-g------~~v~~iGDG~ND~~al~~A------dvgIa~~~~~-~~a~~aadivl~~~ 603 (831)
..|...++.+-+. + ..++++||...|-.|++.. +++|.++..+ ..-..+|++-+.++
T Consensus 164 ~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~p 234 (235)
T PF02358_consen 164 VNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDDP 234 (235)
T ss_dssp --HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES------------------
T ss_pred CChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeecccccccccccccccC
Confidence 3598888877654 2 3799999999999998763 6777777543 22334566666543
No 259
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=26.56 E-value=87 Score=28.41 Aligned_cols=35 Identities=20% Similarity=0.279 Sum_probs=27.3
Q ss_pred CChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCC
Q 003313 472 HDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGI 508 (831)
Q Consensus 472 ~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi 508 (831)
+++.++++.+++.|++++.+|++.+ -...+.+.|.
T Consensus 57 ~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~ 91 (119)
T cd05017 57 EETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGV 91 (119)
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCC
Confidence 5788999999999999999999874 3335555554
No 260
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=26.36 E-value=1.5e+02 Score=31.86 Aligned_cols=63 Identities=19% Similarity=0.118 Sum_probs=37.7
Q ss_pred cEEEeChHHHHHHHHHHhh--cCCEEEEEcCCcc----Chhhhcc--CCeeEEecCc--hHHHhhhcCEEEeC
Q 003313 540 GFTDVFAEHKYEIVKILQE--KKHVVGMTGDGVN----DAPALKK--ADIGIAVAGA--TEAARGAADIVLTE 602 (831)
Q Consensus 540 v~~~~~P~~K~~iv~~l~~--~g~~v~~iGDG~N----D~~al~~--AdvgIa~~~~--~~~a~~aadivl~~ 602 (831)
.|.-|||..=.++++.++- .|+.|+.+|-+.. =+.+|.. |.|-++=... .+.....||+++.-
T Consensus 145 ~~~PcTp~avi~lL~~~~i~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~nl~~~~~~ADIvv~A 217 (299)
T PLN02516 145 LFLPCTPKGCLELLSRSGIPIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTPDPESIVREADIVIAA 217 (299)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 4566777776666665542 4899999999743 3345543 4454444321 22233578998764
No 261
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=25.69 E-value=2.9e+02 Score=29.25 Aligned_cols=30 Identities=7% Similarity=0.187 Sum_probs=19.2
Q ss_pred hHHHHHHHHHHhhcCCEEEEEcCCccChhh
Q 003313 546 AEHKYEIVKILQEKKHVVGMTGDGVNDAPA 575 (831)
Q Consensus 546 P~~K~~iv~~l~~~g~~v~~iGDG~ND~~a 575 (831)
+++-.+.++.+++.-..-.++|=|+|+...
T Consensus 187 ~~~~~~~i~~ir~~t~~Pi~vGFGI~~~e~ 216 (263)
T CHL00200 187 DKKLKKLIETIKKMTNKPIILGFGISTSEQ 216 (263)
T ss_pred cHHHHHHHHHHHHhcCCCEEEECCcCCHHH
Confidence 344566777777654455567999885543
No 262
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=24.80 E-value=1.1e+02 Score=25.81 Aligned_cols=46 Identities=13% Similarity=0.224 Sum_probs=36.4
Q ss_pred ccccCCCCCChHHHHHHHHhCCCeEEE-EcCCCHHHHHHHHHHhCCC
Q 003313 464 LPLFDPPRHDSSDTIHRALKLGVCVKM-ITGDHLAIAKETGRRLGIG 509 (831)
Q Consensus 464 i~~~D~lr~~~~~~I~~l~~~Gi~v~m-~TGD~~~~a~~ia~~~gi~ 509 (831)
+.+.+..++.+.+..+.||+.|+++.+ ..+.+...-..-|.+.|+.
T Consensus 7 i~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~ 53 (91)
T cd00860 7 IPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIP 53 (91)
T ss_pred EeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCC
Confidence 344566778888999999999999988 5666777777788888874
No 263
>PF11694 DUF3290: Protein of unknown function (DUF3290); InterPro: IPR021707 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=24.62 E-value=2.6e+02 Score=26.73 Aligned_cols=20 Identities=20% Similarity=0.136 Sum_probs=14.9
Q ss_pred EEEEEeCCCcCCCcEEEEcC
Q 003313 147 QWKEQDAAVLVPGDIISIKF 166 (831)
Q Consensus 147 ~~~~i~~~~lv~GDiI~l~~ 166 (831)
+...+++..+.-|-||.++.
T Consensus 97 ~~v~VNst~l~dG~iVki~~ 116 (149)
T PF11694_consen 97 EEVYVNSTALTDGMIVKIGD 116 (149)
T ss_pred heEEEecccccCCeEEEECC
Confidence 34567888888888887773
No 264
>PRK10234 DNA-binding transcriptional activator GutM; Provisional
Probab=24.36 E-value=4.6e+02 Score=24.04 Aligned_cols=62 Identities=13% Similarity=0.151 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEeCCCcCCCcEEEEcCCC-ccccceEEEec
Q 003313 109 CLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGD-VIPADARLLEG 179 (831)
Q Consensus 109 ~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~~G~-~iPaDg~ll~g 179 (831)
++.++..+++++|-++-++..++|.+. ..|-+=|.+ .-+.+|-||.+--++ -.-+|+.+.+|
T Consensus 11 ~a~llQ~~lg~~Qik~Fn~~~~~L~~~--G~V~iGr~~-------grf~~g~IvllaiD~~~~I~d~~~M~G 73 (118)
T PRK10234 11 IAWCAQLALGGWQISRFNRAFDTLCQQ--GRVGVGRSS-------GRFKPRVVVALALDEQQRVVDTLFMKG 73 (118)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc--CceEEeccc-------CccCCCeEEEEEECCCCcEEeeEEEcc
Confidence 445667888999999999999998763 345554443 367889988776543 23334444444
No 265
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=24.15 E-value=1.2e+02 Score=27.40 Aligned_cols=80 Identities=16% Similarity=0.232 Sum_probs=52.4
Q ss_pred HHHHhccCeeeeeeeecCCCCC--CCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCC-e-EEEEcCCCHHHHHHHHH
Q 003313 429 NKLAEKGLRSLAVAVQEVPEMT--EDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGV-C-VKMITGDHLAIAKETGR 504 (831)
Q Consensus 429 ~~~~~~G~r~l~~a~~~~~~~~--~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi-~-v~m~TGD~~~~a~~ia~ 504 (831)
.-+...|++|+.+..+ .+.++ ..-.+.+-.++|+-...++--+.+++.++.+|+.+- + .+++-|-....-...++
T Consensus 21 ~~l~~~G~~V~~lg~~-~~~~~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~~~~~~~~~ 99 (119)
T cd02067 21 RALRDAGFEVIDLGVD-VPPEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVLVGGAIVTRDFKFLK 99 (119)
T ss_pred HHHHHCCCEEEECCCC-CCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcCCCCCeEEEECCCCChhHHHHH
Confidence 3456789999776633 22211 111234556888888777777888999999999976 4 46666765544345778
Q ss_pred HhCCC
Q 003313 505 RLGIG 509 (831)
Q Consensus 505 ~~gi~ 509 (831)
+.|.+
T Consensus 100 ~~G~D 104 (119)
T cd02067 100 EIGVD 104 (119)
T ss_pred HcCCe
Confidence 88864
No 266
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=24.06 E-value=1.8e+02 Score=31.07 Aligned_cols=63 Identities=16% Similarity=0.140 Sum_probs=38.5
Q ss_pred cEEEeChHHHHHHHHHHhh--cCCEEEEEcCCcc----Chhhhcc--CCeeEEecCchH--HHhhhcCEEEeC
Q 003313 540 GFTDVFAEHKYEIVKILQE--KKHVVGMTGDGVN----DAPALKK--ADIGIAVAGATE--AARGAADIVLTE 602 (831)
Q Consensus 540 v~~~~~P~~K~~iv~~l~~--~g~~v~~iGDG~N----D~~al~~--AdvgIa~~~~~~--~a~~aadivl~~ 602 (831)
-|.-|||..=.++++.+.. .|+.|+++|-+.. =+.+|.. |-|-++-....+ .....||+++..
T Consensus 133 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~~~~~~ADIvIsA 205 (287)
T PRK14173 133 ALEPCTPAGVVRLLKHYGIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLPAVTRRADVLVVA 205 (287)
T ss_pred CCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEe
Confidence 4566788777777776653 4899999999743 3345544 444444442222 233568998764
No 267
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=24.02 E-value=5.7e+02 Score=23.81 Aligned_cols=103 Identities=12% Similarity=0.046 Sum_probs=64.7
Q ss_pred eeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCH-HHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHh
Q 003313 459 SFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHL-AIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEK 537 (831)
Q Consensus 459 ~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~-~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (831)
.++|.++- |--..+..=+-..|+.+|++|+-.-+|.. +...+.|++-+-+ +
T Consensus 5 v~~a~~g~-D~Hd~g~~iv~~~l~~~GfeVi~lg~~~s~e~~v~aa~e~~ad-------i-------------------- 56 (132)
T TIGR00640 5 ILVAKMGQ-DGHDRGAKVIATAYADLGFDVDVGPLFQTPEEIARQAVEADVH-------V-------------------- 56 (132)
T ss_pred EEEEeeCC-CccHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCC-------E--------------------
Confidence 45666666 66666666677788999999999998864 4444555554421 0
Q ss_pred cCcEEEe---ChHHHHHHHHHHhhcC--CEEEEEcC--CccChhhhccCCeeEEecCchH
Q 003313 538 ADGFTDV---FAEHKYEIVKILQEKK--HVVGMTGD--GVNDAPALKKADIGIAVAGATE 590 (831)
Q Consensus 538 ~~v~~~~---~P~~K~~iv~~l~~~g--~~v~~iGD--G~ND~~al~~AdvgIa~~~~~~ 590 (831)
-+.|.. +.+.-..+++.|+++| .+..++|- ...|...+++++|-=..+.|++
T Consensus 57 -i~iSsl~~~~~~~~~~~~~~L~~~g~~~i~vivGG~~~~~~~~~l~~~Gvd~~~~~gt~ 115 (132)
T TIGR00640 57 -VGVSSLAGGHLTLVPALRKELDKLGRPDILVVVGGVIPPQDFDELKEMGVAEIFGPGTP 115 (132)
T ss_pred -EEEcCchhhhHHHHHHHHHHHHhcCCCCCEEEEeCCCChHhHHHHHHCCCCEEECCCCC
Confidence 012222 2344567888888875 35567773 3346788888887666665543
No 268
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=23.20 E-value=95 Score=29.23 Aligned_cols=80 Identities=13% Similarity=0.205 Sum_probs=53.7
Q ss_pred HHHhccCeeeeeeeecCCCC-CCCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCC-e-EEEEcCCC------HHHHH
Q 003313 430 KLAEKGLRSLAVAVQEVPEM-TEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGV-C-VKMITGDH------LAIAK 500 (831)
Q Consensus 430 ~~~~~G~r~l~~a~~~~~~~-~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi-~-v~m~TGD~------~~~a~ 500 (831)
-+..+|++|+.+..+.-+++ .+.-.+.+-.++|+-...-.-.+.+++.+++|++.|. . .+++-|-- .....
T Consensus 26 ~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~~~~~~i~vGG~~~~~~~~~~~~~ 105 (137)
T PRK02261 26 ALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAGLGDILLYVGGNLVVGKHDFEEVE 105 (137)
T ss_pred HHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcCCCCCeEEEECCCCCCccChHHHH
Confidence 45679999999887542211 1111234557888888888889999999999999966 2 34555543 34445
Q ss_pred HHHHHhCCC
Q 003313 501 ETGRRLGIG 509 (831)
Q Consensus 501 ~ia~~~gi~ 509 (831)
.-++++|.+
T Consensus 106 ~~l~~~G~~ 114 (137)
T PRK02261 106 KKFKEMGFD 114 (137)
T ss_pred HHHHHcCCC
Confidence 667788863
No 269
>PLN02423 phosphomannomutase
Probab=22.64 E-value=98 Score=32.23 Aligned_cols=30 Identities=17% Similarity=0.244 Sum_probs=25.8
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIA 499 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a 499 (831)
++.+.+.++|++|++. ++++++||+.....
T Consensus 24 ~i~~~~~~ai~~l~~~-i~fviaTGR~~~~~ 53 (245)
T PLN02423 24 EATPEMLEFMKELRKV-VTVGVVGGSDLSKI 53 (245)
T ss_pred cCCHHHHHHHHHHHhC-CEEEEECCcCHHHH
Confidence 4778899999999977 99999999976644
No 270
>PRK08433 flagellar motor switch protein; Validated
Probab=22.50 E-value=51 Score=29.80 Aligned_cols=27 Identities=19% Similarity=0.236 Sum_probs=18.5
Q ss_pred EEEeCCCcCCCcEEEEcCCCccccceE
Q 003313 149 KEQDAAVLVPGDIISIKFGDVIPADAR 175 (831)
Q Consensus 149 ~~i~~~~lv~GDiI~l~~G~~iPaDg~ 175 (831)
..+...++.+.|++.+++||+||.|--
T Consensus 38 v~LG~t~itl~dlL~Lq~GDVI~Ld~~ 64 (111)
T PRK08433 38 AELGTTQISLLEILKFEKGSVIDLEKP 64 (111)
T ss_pred EEEecccccHHHHhCCCCCCEEEeCCC
Confidence 345566777777777777777776653
No 271
>PRK15108 biotin synthase; Provisional
Probab=22.11 E-value=4.9e+02 Score=28.64 Aligned_cols=85 Identities=12% Similarity=0.084 Sum_probs=49.6
Q ss_pred CChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHH
Q 003313 472 HDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYE 551 (831)
Q Consensus 472 ~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~ 551 (831)
+...+.++.+|+.|+.+.+--|.-......--++.|++.-.... +. . .+... ++++.-+.+++.+
T Consensus 111 e~i~~~i~~ik~~~i~v~~s~G~ls~e~l~~LkeAGld~~n~~l--------eT-~----p~~f~--~I~~~~~~~~rl~ 175 (345)
T PRK15108 111 PYLEQMVQGVKAMGLETCMTLGTLSESQAQRLANAGLDYYNHNL--------DT-S----PEFYG--NIITTRTYQERLD 175 (345)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCcCCHHHHHHHHHcCCCEEeecc--------cc-C----hHhcC--CCCCCCCHHHHHH
Confidence 46778888888888887665565544444445567875311100 00 0 01111 1233446778899
Q ss_pred HHHHHhhcCCEEE---EEcCCcc
Q 003313 552 IVKILQEKKHVVG---MTGDGVN 571 (831)
Q Consensus 552 iv~~l~~~g~~v~---~iGDG~N 571 (831)
.++.+++.|..++ ++|=|..
T Consensus 176 ~i~~a~~~G~~v~sg~i~GlgEt 198 (345)
T PRK15108 176 TLEKVRDAGIKVCSGGIVGLGET 198 (345)
T ss_pred HHHHHHHcCCceeeEEEEeCCCC
Confidence 9999988886555 5665544
No 272
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=21.59 E-value=1.4e+02 Score=28.12 Aligned_cols=80 Identities=10% Similarity=0.126 Sum_probs=50.2
Q ss_pred HHHhccCeeeeeeeecCCCCC-CCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCC--eEEEEcCCC---HH---HHH
Q 003313 430 KLAEKGLRSLAVAVQEVPEMT-EDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGV--CVKMITGDH---LA---IAK 500 (831)
Q Consensus 430 ~~~~~G~r~l~~a~~~~~~~~-~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi--~v~m~TGD~---~~---~a~ 500 (831)
.+...|++|+.+..+.-++.- +.-.+.+-.++|+-++.=.--+..++.++.|+++|. .++++=|-. .. ...
T Consensus 24 ~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl~~~~vivGG~~vi~~~d~~~~~ 103 (134)
T TIGR01501 24 AFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGLEGILLYVGGNLVVGKQDFPDVE 103 (134)
T ss_pred HHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCCCCCEEEecCCcCcChhhhHHHH
Confidence 456789999988775432210 111234456788777776666778899999999987 355566632 11 123
Q ss_pred HHHHHhCCC
Q 003313 501 ETGRRLGIG 509 (831)
Q Consensus 501 ~ia~~~gi~ 509 (831)
.-++++|+.
T Consensus 104 ~~l~~~Gv~ 112 (134)
T TIGR01501 104 KRFKEMGFD 112 (134)
T ss_pred HHHHHcCCC
Confidence 456888864
No 273
>PF10777 YlaC: Inner membrane protein YlaC; InterPro: IPR019713 The extracytoplasmic function (ECF) sigma factors are small regulatory proteins that are quite divergent in sequence relative to most other sigma factors. YlaC, regulated by YlaA, is important in oxidative stress resistance. It contributes to hydrogen peroxide resistance in Bacillus subtilis [].
Probab=21.24 E-value=2e+02 Score=27.26 Aligned_cols=50 Identities=24% Similarity=0.457 Sum_probs=24.4
Q ss_pred CcCchHHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHH
Q 003313 760 LERPGALLMCAFVLAQLVATLIAVYAHISFAYISGIGWGWAGVIWLYSLVFYILLDI 816 (831)
Q Consensus 760 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 816 (831)
.++| ++++++.++.+.+.++..+.+ ..+.+|.|.+.++......+++.++
T Consensus 33 ~~HP--~L~~~M~~~y~~~~~lm~~sp-----y~G~~s~~~ftv~fv~m~~~llfDI 82 (155)
T PF10777_consen 33 RNHP--YLCLAMYAAYLAVAALMYYSP-----YFGLGSVWGFTVFFVVMAAFLLFDI 82 (155)
T ss_pred HhCc--HHHHHHHHHHHHHHHHHHhcc-----hhhhHHHHHHHHHHHHHHHHHHhhc
Confidence 3455 566777776655544433321 2223555555544444444444443
No 274
>PRK04302 triosephosphate isomerase; Provisional
Probab=21.07 E-value=5.1e+02 Score=26.37 Aligned_cols=100 Identities=18% Similarity=0.201 Sum_probs=52.3
Q ss_pred CChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHH
Q 003313 472 HDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYE 551 (831)
Q Consensus 472 ~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~ 551 (831)
++..+.++.+++.|+.+++++|+.. .+..+ .+.|-+--.+...-..|... .....+|++-.+
T Consensus 101 ~e~~~~v~~a~~~Gl~~I~~v~~~~-~~~~~-~~~~~~~I~~~p~~~igt~~----------------~~~~~~~~~i~~ 162 (223)
T PRK04302 101 ADIEAVVERAKKLGLESVVCVNNPE-TSAAA-AALGPDYVAVEPPELIGTGI----------------PVSKAKPEVVED 162 (223)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCHH-HHHHH-hcCCCCEEEEeCccccccCC----------------CCCcCCHHHHHH
Confidence 4577889999999999999999843 33332 22221100000000000000 011245666667
Q ss_pred HHHHHhhc-CCEEEEEcCCccChh---hhccCC-eeEEecCch
Q 003313 552 IVKILQEK-KHVVGMTGDGVNDAP---ALKKAD-IGIAVAGAT 589 (831)
Q Consensus 552 iv~~l~~~-g~~v~~iGDG~ND~~---al~~Ad-vgIa~~~~~ 589 (831)
+++.+++. .+.-...|-|+|+.. .+.+++ =|+.+|++.
T Consensus 163 ~~~~ir~~~~~~pvi~GggI~~~e~~~~~~~~gadGvlVGsa~ 205 (223)
T PRK04302 163 AVEAVKKVNPDVKVLCGAGISTGEDVKAALELGADGVLLASGV 205 (223)
T ss_pred HHHHHHhccCCCEEEEECCCCCHHHHHHHHcCCCCEEEEehHH
Confidence 77777763 344556688886554 333343 456666543
No 275
>PLN02591 tryptophan synthase
Probab=20.98 E-value=3.1e+02 Score=28.76 Aligned_cols=33 Identities=15% Similarity=0.169 Sum_probs=22.1
Q ss_pred hHHHHHHHHHHhhcCCEEEEEcCCcc---Chhhhcc
Q 003313 546 AEHKYEIVKILQEKKHVVGMTGDGVN---DAPALKK 578 (831)
Q Consensus 546 P~~K~~iv~~l~~~g~~v~~iGDG~N---D~~al~~ 578 (831)
|++-.+.++.+++....-.++|-|++ |+..+..
T Consensus 174 ~~~~~~~i~~vk~~~~~Pv~vGFGI~~~e~v~~~~~ 209 (250)
T PLN02591 174 SGRVESLLQELKEVTDKPVAVGFGISKPEHAKQIAG 209 (250)
T ss_pred chhHHHHHHHHHhcCCCceEEeCCCCCHHHHHHHHh
Confidence 45556777788776566677899988 4444433
No 276
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.90 E-value=3e+02 Score=29.44 Aligned_cols=63 Identities=19% Similarity=0.228 Sum_probs=38.2
Q ss_pred cEEEeChHHHHHHHHHHhh--cCCEEEEEcCCcc----Chhhhcc------CCeeEEecCch--HHHhhhcCEEEeC
Q 003313 540 GFTDVFAEHKYEIVKILQE--KKHVVGMTGDGVN----DAPALKK------ADIGIAVAGAT--EAARGAADIVLTE 602 (831)
Q Consensus 540 v~~~~~P~~K~~iv~~l~~--~g~~v~~iGDG~N----D~~al~~------AdvgIa~~~~~--~~a~~aadivl~~ 602 (831)
-|.-|||..=.++++.++- .|+.|..+|-+.. =+.+|.+ |-|-++-.... ......||+++..
T Consensus 131 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~AtVtvchs~T~~l~~~~~~ADIvV~A 207 (287)
T PRK14181 131 GFIPCTPAGIIELLKYYEIPLHGRHVAIVGRSNIVGKPLAALLMQKHPDTNATVTLLHSQSENLTEILKTADIIIAA 207 (287)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHhCcCCCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 4666778777777776652 5899999999743 3345543 33444333222 2233578998763
No 277
>PF02699 YajC: Preprotein translocase subunit; InterPro: IPR003849 Secretion across the inner membrane in some Gram-negative bacteria occurs via the preprotein translocase pathway. Proteins are produced in the cytoplasm as precursors, and require a chaperone subunit to direct them to the translocase component []. From there, the mature proteins are either targeted to the outer membrane, or remain as periplasmic proteins []. The translocase protein subunits are encoded on the bacterial chromosome. The translocase itself comprises 7 proteins, including a chaperone (SecB), ATPase (SecA), an integral membrane complex (SecY, SecE and SecG), and two additional membrane proteins that promote the release of the mature peptide into the periplasm (SecD and SecF) []. Other cytoplasmic/periplasmic proteins play a part in preprotein translocase activity, namely YidC and YajC []. The latter is bound in a complex to SecD and SecF, and plays a part in stabilising and regulating secretion through the SecYEG integral membrane component via SecA []. Homologues of the YajC gene have been found in a range of pathogenic and commensal microbes. Brucella abortis YajC- and SecD-like proteins were shown to stimulate a Th1 cell-mediated immune response in mice, and conferred protection when challenged with B.abortis []. Therefore, these proteins may have an antigenic role as well as a secretory one in virulent bacteria []. A number of previously uncharacterised "hypothetical" proteins also show similarity to E.coli YajC, suggesting that this family is wider than first thought []. More recently, the precise interactions between the E.coli SecYEG complex, SecD, SecF, YajC and YidC have been studied []. Rather than acting individually, the four proteins form a heterotetrameric complex and associate with the SecYEG heterotrimeric complex []. The SecF and YajC subunits link the complex to the integral membrane translocase. ; PDB: 2RDD_B.
Probab=20.43 E-value=1.3e+02 Score=25.54 Aligned_cols=14 Identities=43% Similarity=0.494 Sum_probs=0.4
Q ss_pred CCcCCCcEEEEcCC
Q 003313 154 AVLVPGDIISIKFG 167 (831)
Q Consensus 154 ~~lv~GDiI~l~~G 167 (831)
++|+|||-|....|
T Consensus 35 ~~Lk~Gd~VvT~gG 48 (82)
T PF02699_consen 35 ASLKPGDEVVTIGG 48 (82)
T ss_dssp G-------------
T ss_pred HcCCCCCEEEECCc
Confidence 34445554444443
No 278
>PF07287 DUF1446: Protein of unknown function (DUF1446); InterPro: IPR010839 This family consists of several bacterial and plant proteins of around 400 residues in length. The function of this family is unknown.
Probab=20.32 E-value=2.5e+02 Score=31.16 Aligned_cols=103 Identities=21% Similarity=0.228 Sum_probs=59.3
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCC-----HHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEe
Q 003313 470 PRHDSSDTIHRALKLGVCVKMITGDH-----LAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDV 544 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~v~m~TGD~-----~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 544 (831)
.+++....+..++++||+++.=+|-. ....+++|++.|+... .+-+
T Consensus 56 ~~~~L~~~L~~~~~~gIkvI~NaGg~np~~~a~~v~eia~e~Gl~lk-----------------------------vA~V 106 (362)
T PF07287_consen 56 FVRDLRPLLPAAAEKGIKVITNAGGLNPAGCADIVREIARELGLSLK-----------------------------VAVV 106 (362)
T ss_pred HHHHHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHHHHHhcCCCee-----------------------------EEEE
Confidence 34577889999999999999888754 3456677888887521 3444
Q ss_pred ChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeE--Eec--CchHHHhhhcCEEEeC
Q 003313 545 FAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI--AVA--GATEAARGAADIVLTE 602 (831)
Q Consensus 545 ~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgI--a~~--~~~~~a~~aadivl~~ 602 (831)
.-++-...++.+.+.|...--...|. +.+....--+++ -|| .=.++.++-||+|+..
T Consensus 107 ~gDd~~~~v~~~~~~g~~~~~l~~~~-~l~~~~~~~~~a~aylGa~pI~~AL~~GADIVI~G 167 (362)
T PF07287_consen 107 YGDDLKDEVKELLAEGETIRPLDTGP-PLSEWDDRIVSANAYLGAEPIVEALEAGADIVITG 167 (362)
T ss_pred ECccchHhHHHHHhCCCCCccCCCCC-CcchhccccceEEEecChHHHHHHHHcCCCEEEeC
Confidence 44554555555555554333333332 332211111121 234 2234556679999974
No 279
>PRK05886 yajC preprotein translocase subunit YajC; Validated
Probab=20.11 E-value=3e+02 Score=24.84 Aligned_cols=23 Identities=30% Similarity=0.328 Sum_probs=10.5
Q ss_pred HHHHHHHHHHhccCCCeEEEEEC
Q 003313 123 SNAENATAALMAHLTPKTKVLRD 145 (831)
Q Consensus 123 ~~~~~~~~~l~~~~~~~~~V~rd 145 (831)
+|+++..+++.+.+.+--+|+-.
T Consensus 26 kKr~K~~~~m~~~Lk~GD~VvT~ 48 (109)
T PRK05886 26 RKAMQATIDLHESLQPGDRVHTT 48 (109)
T ss_pred HHHHHHHHHHHHhcCCCCEEEEC
Confidence 44444444554444444444443
Done!